BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5556
(115 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|440906263|gb|ELR56546.1| hypothetical protein M91_19203, partial [Bos grunniens mutus]
Length = 154
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 72/104 (69%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR C+
Sbjct: 38 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCH 97
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T + LR+C+T + LR+C+T + LR+C+T + LR+C+T+ +
Sbjct: 98 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYI 141
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 72/104 (69%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR C+
Sbjct: 48 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCH 107
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T + LR+C+T + LR+C+T + LR+C+T + LR+C+T+ +
Sbjct: 108 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYIRLRDCHTKYV 151
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 72/104 (69%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR C+
Sbjct: 8 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCH 67
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T + LR+C+T + LR+C+T + LR+C+T + LR+C+T+ +
Sbjct: 68 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYV 111
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 72/104 (69%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR C+
Sbjct: 18 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCH 77
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T + LR+C+T + LR+C+T + LR+C+T + LR+C+T+ +
Sbjct: 78 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYV 121
Score = 113 bits (282), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 72/104 (69%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR C+
Sbjct: 28 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCH 87
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T + LR+C+T + LR+C+T + LR+C+T + LR+C+T+ +
Sbjct: 88 TKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYV 131
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 70/99 (70%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR+C+T + LR C+T +
Sbjct: 3 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYVR 62
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LR+C+T + LR+C+T + LR+C+T + LR+C+T+ +
Sbjct: 63 LRDCHTKYVRLRDCHTKYVRLRDCHTKYVRLRDCHTKYV 101
>gi|395503012|ref|XP_003755867.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-interacting
protein 1 [Sarcophilus harrisii]
Length = 1709
Score = 80.9 bits (198), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
L + N N + NC L L NC+ L NC L L + + L + +C+
Sbjct: 1218 EAKLAIENYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKLSLEDYDEAKLAIENCD 1277
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L NC+ L L NC+ + NC+ L L NC+
Sbjct: 1278 EENKSLENCDKAKLSLENCDEVEQFIENCDEAKLSLENCD 1317
Score = 78.6 bits (192), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 41/102 (40%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
L L + + L + N N + NC L L NC+ L NC L L +
Sbjct: 1210 KLSLEDYDEAKLAIENYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKLSLEDYDEA 1269
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L + NC+ L NC+ L L NC+ + NC+ L
Sbjct: 1270 KLAIENCDEENKSLENCDKAKLSLENCDEVEQFIENCDEAKL 1311
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 40/97 (41%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
+ NC L L + + L + N N + NC L L NC+ L +C L
Sbjct: 1202 SIENCEETKLSLEDYDEAKLAIENYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKL 1261
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + + L + NC+ L NC+ L L NC+
Sbjct: 1262 SLEDYDEAKLAIENCDEENKSLENCDKAKLSLENCDE 1298
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 44/117 (37%), Gaps = 14/117 (11%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-------TGG 54
L + NC+ L NC+ L L NC+ + NC+ L L NC+
Sbjct: 1268 EAKLAIENCDEENKSLENCDKAKLSLENCDEVEQFIENCDEAKLSLENCDKATENGEEAK 1327
Query: 55 LGLRSCN-------TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L L +C+ L L NC+ + C+ L N + L L NC+
Sbjct: 1328 LSLENCDKATENGEEAKLSLENCDEEEQSIEICDEEKQSLENSDKAKLSLENCDEEE 1384
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 39/100 (39%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
+ C+ + NC L L + + L + N N + NC L L +C+
Sbjct: 1192 SIEVCHEFKPSIENCEETKLSLEDYDEAKLAIENYNEEKERVENCKEAKLSLENCDEEEQ 1251
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L NC L L + + L + NC+ L NC+ L
Sbjct: 1252 SLANCEEAKLSLEDYDEAKLAIENCDEENKSLENCDKAKL 1291
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 37/95 (38%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
NCN + C+ + NC L L + + L + N N + +C L L
Sbjct: 1185 NCNKEKQSIEVCHEFKPSIENCEETKLSLEDYDEAKLAIENYNEEKERVENCKEAKLSLE 1244
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
NC+ L NC L L + + L + NC+
Sbjct: 1245 NCDEEEQSLANCEEAKLSLEDYDEAKLAIENCDEE 1279
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 14/109 (12%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-------TGGLGLRNCN------- 51
L NC+ L L NC+ + NC+ L L NC+ L L NC+
Sbjct: 1282 SLENCDKAKLSLENCDEVEQFIENCDEAKLSLENCDKATENGEEAKLSLENCDKATENGE 1341
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
L L +C+ + C+ L N + L L NC+ + NC
Sbjct: 1342 EAKLSLENCDEEEQSIEICDEEKQSLENSDKAKLSLENCDEEEQSIENC 1390
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 37/97 (38%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
NC+ + NCN + C+ + NC L L + + L + + N +
Sbjct: 1175 NCDEAKPPIGNCNKEKQSIEVCHEFKPSIENCEETKLSLEDYDEAKLAIENYNEEKERVE 1234
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NC L L NC+ L NC L L + + L
Sbjct: 1235 NCKEAKLSLENCDEEEQSLANCEEAKLSLEDYDEAKL 1271
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 36/97 (37%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
NC+ + NC+ + NCN + C+ + NC L L + L +
Sbjct: 1165 NCDEAKSPIGNCDEAKPPIGNCNKEKQSIEVCHEFKPSIENCEETKLSLEDYDEAKLAIE 1224
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
N N + NC L L NC+ L NC L
Sbjct: 1225 NYNEEKERVENCKEAKLSLENCDEEEQSLANCEEAKL 1261
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 39/112 (34%), Gaps = 14/112 (12%)
Query: 2 SGGLGLRNCN-------TGGLGLRNCN-------TGGLGLRNCNTGGLGLRNCNTGGLGL 47
L L NC+ L L NC+ L L NC+ + C+ L
Sbjct: 1308 EAKLSLENCDKATENGEEAKLSLENCDKATENGEEAKLSLENCDEEEQSIEICDEEKQSL 1367
Query: 48 RNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
N + L L +C+ + NC L L N L + N + L + N
Sbjct: 1368 ENSDKAKLSLENCDEEEQSIENCGEAKLRLENFEDDNLSIENSDEAKLPIEN 1419
>gi|156402770|ref|XP_001639763.1| predicted protein [Nematostella vectensis]
gi|156226893|gb|EDO47700.1| predicted protein [Nematostella vectensis]
Length = 156
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 70
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGL+ + LGL+ + LGLR + L
Sbjct: 71 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPAL 113
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 21 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 80
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGL+ + LGLR + LGL+ + L
Sbjct: 81 PALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSLPAL 123
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 31 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 90
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGLR + LGL+ + LGL+ + L
Sbjct: 91 PALGLQYLSLPALGLRYLSLPALGLQYLSLPALGLQYLSLPAL 133
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 41 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 100
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGLR + LGL+ + LGL+ + LGL+ + L
Sbjct: 101 PALGLRYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 143
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGLR +
Sbjct: 51 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSL 110
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 111 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 153
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 2 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLP 61
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 62 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 103
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGLR + LGL+ +
Sbjct: 61 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLRYLSLPALGLQYLSL 120
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
LGL+ + LGL+ + LGL+ + LGL+
Sbjct: 121 PALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQ 156
>gi|156385484|ref|XP_001633660.1| predicted protein [Nematostella vectensis]
gi|156220733|gb|EDO41597.1| predicted protein [Nematostella vectensis]
Length = 151
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 50/98 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 3 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 62
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR C T G LR C T G +R C T G LR C T G
Sbjct: 63 LRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSG 100
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 50/98 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 13 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 72
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR C T G +R C T G LR C T G LR C T G
Sbjct: 73 LRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSG 110
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 50/98 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C T G LR C T G LR C T G LR C T G LR C T G LR C T G
Sbjct: 23 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 82
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+R C T G LR C T G LR C T G LR C T G
Sbjct: 83 VRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 120
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 50/98 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C T G LR C T G LR C T G LR C T G LR C T G +R C T G
Sbjct: 33 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPVRPCTTSGGP 92
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR C T G LR C T G LR C T G LR C T G
Sbjct: 93 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 130
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 50/98 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C T G LR C T G LR C T G LR C T G +R C T G LR C T G
Sbjct: 43 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGP 102
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR C T G LR C T G LR C T G LR C T G
Sbjct: 103 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 140
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 50/98 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C T G LR C T G LR C T G +R C T G LR C T G LR C T G
Sbjct: 53 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPVRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 112
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR C T G LR C T G LR C T G LR C T G
Sbjct: 113 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 150
>gi|156408239|ref|XP_001641764.1| predicted protein [Nematostella vectensis]
gi|156228904|gb|EDO49701.1| predicted protein [Nematostella vectensis]
Length = 301
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GLR +T GLR +T GLR +T LR +T GLR +T LR +T
Sbjct: 186 GLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPGLRPLDTEQPRLRPLDTEQP 245
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
LR +T GLR NT GLR +T GLR +T
Sbjct: 246 RLRPLDTKQPGLRPLNTKQPGLRPLDTEQPGLRPLDT 282
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GLR +T GLR +T LR +T GLR +T LR +T LR +T
Sbjct: 196 GLRPLDTEQPGLRPLDTEQPILRPLDTEQPGLRPLDTEQPRLRPLDTEQPRLRPLDTKQP 255
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GLR NT GLR +T GLR +T GLR +T
Sbjct: 256 GLRPLNTKQPGLRPLDTEQPGLRPLDTEQPGLRPLDT 292
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 47/97 (48%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GLR +TG GLR +T LR +T G R +T GLR +T GLR +T
Sbjct: 146 GLRPLDTGQPGLRPLDTEQPRLRPLDTEQPGHRPLDTEQPGLRPLDTEQPGLRPLDTEQP 205
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GLR +T LR +T GLR +T LR +T
Sbjct: 206 GLRPLDTEQPILRPLDTEQPGLRPLDTEQPRLRPLDT 242
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 46/97 (47%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G R +T GLR +T GLR +T GLR +T LR +T GLR +T
Sbjct: 176 GHRPLDTEQPGLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPGLRPLDTEQP 235
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
LR +T LR +T GLR NT GLR +T
Sbjct: 236 RLRPLDTEQPRLRPLDTKQPGLRPLNTKQPGLRPLDT 272
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R +T GLR +TG GLR +T LR +T G R +T GLR +T GL
Sbjct: 138 RPLDTEKPGLRPLDTGQPGLRPLDTEQPRLRPLDTEQPGHRPLDTEQPGLRPLDTEQPGL 197
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
R +T GLR +T LR +T GLR +T
Sbjct: 198 RPLDTEQPGLRPLDTEQPILRPLDTEQPGLRPLDT 232
Score = 68.2 bits (165), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 46/97 (47%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR +T G R +T GLR +T GLR +T GLR +T LR +T G
Sbjct: 167 LRPLDTEQPGHRPLDTEQPGLRPLDTEQPGLRPLDTEQPGLRPLDTEQPILRPLDTEQPG 226
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
LR +T LR +T LR +T GLR NT+
Sbjct: 227 LRPLDTEQPRLRPLDTEQPRLRPLDTKQPGLRPLNTK 263
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G R +T GLR +T LR +T GLR +T LR +T GLR +T
Sbjct: 58 GYRPQDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDTEQPGLRPLDTEQP 117
Query: 66 GLRNCNTGGLGLRNCNTG--------GLGLRNCNTGGLGLRNCNT 102
GLR +T GLR +TG GLR +TG GLR +T
Sbjct: 118 GLRPLDTEQPGLRPLDTGKCRPLDTEKPGLRPLDTGQPGLRPLDT 162
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 48/102 (47%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G GLR +T LR +T G R +T GLR +T GLR +T GLR +
Sbjct: 152 TGQPGLRPLDTEQPRLRPLDTEQPGHRPLDTEQPGLRPLDTEQPGLRPLDTEQPGLRPLD 211
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
T LR +T GLR +T LR +T LR +T+
Sbjct: 212 TEQPILRPLDTEQPGLRPLDTEQPRLRPLDTEQPRLRPLDTK 253
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G R +T LR +T G R +T GLR +T LR +T GLR +T
Sbjct: 38 GHRPLDTEQPRLRPLDTEQPGYRPQDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQP 97
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
LR +T GLR +T GLR +T GLR +T
Sbjct: 98 RLRPLDTEQPGLRPLDTEQPGLRPLDTEQPGLRPLDT 134
Score = 65.5 bits (158), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 45/97 (46%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GLR +TG GLR +T LR +T G R +T LR +T G R +T
Sbjct: 8 GLRPLDTGQPGLRPLDTEQPRLRPLDTEQPGHRPLDTEQPRLRPLDTEQPGYRPQDTEQP 67
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GLR +T LR +T GLR +T LR +T
Sbjct: 68 GLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDT 104
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR +T G R +T GLR +T LR +T GLR +T LR +T G
Sbjct: 49 LRPLDTEQPGYRPQDTEQPGLRPLDTEQPRLRPQDTEQPGLRPLDTEQPRLRPLDTEQPG 108
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTG--------GLGLRNCNT 102
LR +T GLR +T GLR +TG GLR +T
Sbjct: 109 LRPLDTEQPGLRPLDTEQPGLRPLDTGKCRPLDTEKPGLRPLDT 152
>gi|156402772|ref|XP_001639764.1| predicted protein [Nematostella vectensis]
gi|156226894|gb|EDO47701.1| predicted protein [Nematostella vectensis]
Length = 123
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 19 SALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSL 78
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 79 SALGLQYLSLTALGLQYLSLPALGLQYLSLPALGLQYLSLPAL 121
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 11 IGLQYLSLSALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPA 70
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL+ + LGL+ + LGL+ + LGL+ + L
Sbjct: 71 LGLQYLSLSALGLQYLSLTALGLQYLSLPALGLQYLSLPAL 111
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
LGL+ + LGL+ + LGL+ + LGL+ + LGL+ + LGL+ +
Sbjct: 30 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLPALGLQYLSLSALGLQYLSLT 89
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
LGL+ + LGL+ + LGL+ + LGL
Sbjct: 90 ALGLQYLSLPALGLQYLSLPALGLQYLSLPALGL 123
>gi|260819543|ref|XP_002605096.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae]
gi|229290426|gb|EEN61106.1| hypothetical protein BRAFLDRAFT_85244 [Branchiostoma floridae]
Length = 697
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 59/104 (56%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + G +++C + G +++C + G C
Sbjct: 316 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDC 375
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + G +++C + G
Sbjct: 376 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 419
Score = 71.2 bits (173), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 59/104 (56%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + G +++C + G +C + G ++ C
Sbjct: 326 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDC 385
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + G +++C + G
Sbjct: 386 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 429
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 20/99 (20%), Positives = 56/99 (56%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + G +C + G +++C + G ++ C
Sbjct: 336 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDC 395
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G +++C + G +++C + G +++C + G +++
Sbjct: 396 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKD 434
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 57/104 (54%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G ++ + G +++C + G +++C + G +++C + G +++C + G ++ C
Sbjct: 306 YSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +C + G +++C + G +++C + G +++C + G
Sbjct: 366 YSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 409
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/114 (19%), Positives = 62/114 (54%), Gaps = 10/114 (8%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
S G +++C + G +++C + G +++C + G +++C + G +++C + G ++
Sbjct: 376 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDR 435
Query: 59 ----SC----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 436 YSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 489
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 58/104 (55%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + + +C + G + +C + G +++
Sbjct: 256 YSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKAR 315
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + G +++C + G
Sbjct: 316 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 359
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 59/104 (56%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + G +++ + G +++ + G ++ C
Sbjct: 396 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDC 455
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + G +++C + G
Sbjct: 456 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 499
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/107 (19%), Positives = 58/107 (54%), Gaps = 1/107 (0%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G + +C + G +++C + G + +C + G + C
Sbjct: 186 YSSGACIKDCYSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDC 245
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-CNTRGLV 106
+ G ++ + G +++C + G +++C + G +++ C++R +
Sbjct: 246 YSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACI 292
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/104 (20%), Positives = 56/104 (53%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G + +C + G ++ + G +++C + G +++C + G +++C + G ++ C
Sbjct: 296 YSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 355
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +C + G +++C + G +++C + G
Sbjct: 356 YSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSG 399
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 56/104 (53%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + + +C + G + +C + G ++ + G ++ C
Sbjct: 266 YSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDC 325
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + G +++C + G
Sbjct: 326 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 369
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 19/99 (19%), Positives = 55/99 (55%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +C + G +++C + G +++C + G ++ C
Sbjct: 346 YSSGACIKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 405
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G +++C + G +++C + G +++ + G +++
Sbjct: 406 YSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIKD 444
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 56/104 (53%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G + +C + G +++C + G + +C + G + +C + G +++
Sbjct: 196 YSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIKAR 255
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + + +C + G
Sbjct: 256 YSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSG 299
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/114 (18%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
S G +++C + G +++C + G +++C + G +++C + G +++C + G ++
Sbjct: 446 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDR 505
Query: 59 --------SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
C + G + + + G +++C + G +++C + G +++C + G
Sbjct: 506 YSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 559
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/114 (18%), Positives = 59/114 (51%), Gaps = 10/114 (8%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR----------NCNTGGLGLRNC 50
S G +++C + G +++C + G +++C + G ++ +C + G + +
Sbjct: 466 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIEDR 525
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G ++ C + G +++C + G +++C + G +++C + G +++C + G
Sbjct: 526 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 579
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/124 (17%), Positives = 59/124 (47%), Gaps = 20/124 (16%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +C + G +++C + G +++C + G +++C + G ++ C
Sbjct: 356 YSSGACIKDCYSSGACKTDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 415
Query: 61 NTGGLGLRNC--------------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+ G +++C + G +++C + G +++C + G +++C
Sbjct: 416 YSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDC 475
Query: 101 NTRG 104
+ G
Sbjct: 476 YSSG 479
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/98 (19%), Positives = 53/98 (54%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+ +C + G + +C + G ++ + G +++C + G +++C + G ++ C + G
Sbjct: 292 ITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGAC 351
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+++C + G +++C + G +C + G +++C + G
Sbjct: 352 IKDCYSSGACIKDCYSSGACKTDCYSSGACIKDCYSSG 389
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 18/99 (18%), Positives = 56/99 (56%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++ + G +++ + G +++C + G ++ C
Sbjct: 406 YSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIKDRYSSGACIKDCYSSGACIKDC 465
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G +++C + G +++C + G +++C + G +++
Sbjct: 466 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKD 504
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 55/104 (52%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++ + G +++C + G +++C + G + +C + G ++ C
Sbjct: 166 YSSGACIKDCYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIEDCYSSGACIKDC 225
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G + +C + G + +C + G ++ + G +++C + G
Sbjct: 226 YSSGACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSG 269
Score = 57.8 bits (138), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 55/104 (52%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++ + G +++C + G +++C + G + +C + G +++C + G + C
Sbjct: 176 YSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDC 235
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G + +C + G ++ + G +++C + G +++C + G
Sbjct: 236 YSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSG 279
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 53/104 (50%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G + +C + G +++C + G + +C + G + +C + G ++ + G ++ C
Sbjct: 206 YSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIKARYSSGACIKDC 265
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + + +C + G + +C + G
Sbjct: 266 YSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDCYSSG 309
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 54/104 (51%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + + +C + G + +C + G ++ + G +++C + G ++ C
Sbjct: 276 YSSGACIKDCCSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDC 335
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++C + G +++C + G +++C + G +C + G
Sbjct: 336 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACKTDCYSSG 379
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/109 (17%), Positives = 56/109 (51%), Gaps = 10/109 (9%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRN----------CNTGGLGLRNCNTGGLGLRNC 50
S G +++C + G +++C + G +++ C + G + + + G +++C
Sbjct: 476 YSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIEDRYSSGACIKDC 535
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G ++ C + G +++C + G +++C + G +++C + G +++
Sbjct: 536 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKD 584
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/102 (18%), Positives = 54/102 (52%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G + +C + G + + + G +++C + G +++C + G +++C + G ++ C
Sbjct: 506 YSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 565
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ G +++C + G +++ + G + +C + G ++C +
Sbjct: 566 YSSGACIKDCYSSGACIKDRYSSGACIEDCYSSGACEKDCYS 607
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 17/99 (17%), Positives = 53/99 (53%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + G +++C + G +++C + G ++
Sbjct: 526 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDR 585
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G + +C + G ++C + +++ + G +++
Sbjct: 586 YSSGACIEDCYSSGACEKDCYSSWACIKDSYSSGACIKD 624
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/114 (17%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++ + G +++C + G +++C + G +++C + G +++C + G ++ C
Sbjct: 436 YSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 495
Query: 61 NTGGLGLR----------NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G ++ +C + G + + + G +++C + G +++C + G
Sbjct: 496 YSSGACIKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDCYSSG 549
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/99 (17%), Positives = 52/99 (52%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G + + + G +++C + G +++C + G +++C + G +++C + G ++ C
Sbjct: 516 YSSGACIEDRYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDC 575
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G +++ + G + +C + G ++C + +++
Sbjct: 576 YSSGACIKDRYSSGACIEDCYSSGACEKDCYSSWACIKD 614
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 54/104 (51%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G ++ + G +++C + G +++C + G +++C + + +C + G + C
Sbjct: 246 YSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDCYSSGACIEDC 305
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G ++ + G +++C + G +++C + G +++C + G
Sbjct: 306 YSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSG 349
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/114 (17%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 1 MSGGLGLRNCNTGGLGLRN----------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 50
S G +++C + G +++ C + G + + + G +++C + G +++C
Sbjct: 486 YSSGACIKDCYSSGACIKDRYSSGACITDCYSSGACIEDRYSSGACIKDCYSSGACIKDC 545
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G ++ C + G +++C + G +++C + G +++ + G + +C + G
Sbjct: 546 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIEDCYSSG 599
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 53/104 (50%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G + +C + G ++ + G +++C + G +++C + G +++C + + C
Sbjct: 236 YSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDCCSSRACITDC 295
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G + +C + G ++ + G +++C + G +++C + G
Sbjct: 296 YSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSG 339
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/98 (18%), Positives = 51/98 (52%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G ++ + G +++C + G +++ + G +++C + G +++C + G + C
Sbjct: 156 YSSGACIKARYSSGACIKDCYSSGACIKDRYSSGACIKDCYSSGACIKDCYSSGACIEDC 215
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
+ G +++C + G + +C + G + +C + G ++
Sbjct: 216 YSSGACIKDCYSSGACITDCYSSGACIEDCYSSGACIK 253
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/114 (18%), Positives = 57/114 (50%), Gaps = 10/114 (8%)
Query: 1 MSGGLGLRNCNTGGLGLRN------C----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 50
S G +++C + G +++ C + G +++C + G +++ + G +++C
Sbjct: 136 YSSGACIKDCYSFGACIKDRYSSGACIKARYSSGACIKDCYSSGACIKDRYSSGACIKDC 195
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ G ++ C + G + +C + G +++C + G + +C + G + +C + G
Sbjct: 196 YSSGACIKDCYSSGACIEDCYSSGACIKDCYSSGACITDCYSSGACIEDCYSSG 249
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 52/104 (50%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G + +C + G + +C + G ++ + G +++C + G +++C + G ++ C
Sbjct: 226 YSSGACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKDC 285
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ + +C + G + +C + G ++ + G +++C + G
Sbjct: 286 CSSRACITDCYSSGACIEDCYSSGACIKARYSSGACIKDCYSSG 329
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/99 (16%), Positives = 52/99 (52%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G +++C + G +++C + G +++C + G +++ + G + C
Sbjct: 536 YSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDCYSSGACIKDRYSSGACIEDC 595
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G ++C + +++ + G +++ + G +++
Sbjct: 596 YSSGACEKDCYSSWACIKDSYSSGACIKDRYSSGARIKD 634
>gi|350412375|ref|XP_003489624.1| PREDICTED: hypothetical protein LOC100746973 [Bombus impatiens]
Length = 3430
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 44/110 (40%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G + T G + T G G+ T G G+ T G G+ T G G+ T
Sbjct: 1760 GPTVEEKPTEGPTVEEKPTEGPGVEEKPTEGPGVEEKPTEGPGVEEKPTEGPGVEEKPTE 1819
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQ 113
G G+ T G G+ T G G+ T G G+ T G VA PT+
Sbjct: 1820 GPGVEEKPTEGPGVEEKPTEGPGVEEKPTEGPGVEEKPTEGSVAEEKPTE 1869
>gi|156339202|ref|XP_001620110.1| hypothetical protein NEMVEDRAFT_v1g66646 [Nematostella vectensis]
gi|156204499|gb|EDO28010.1| predicted protein [Nematostella vectensis]
Length = 239
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ LR C+ + LR C + L C+ + LR C+ + LR C+ + LR C+
Sbjct: 38 SVHLRMCSVCSVHLRMCGVRSVHLPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCSAC 97
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ LR C+ + LR C+ + LR C+ + LR C+
Sbjct: 98 SVHLRMCSACSVHLRMCSACSVHLRMCSVCSVDLRMCSV 136
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ LR C + L C+ + LR C+ + LR C+ + LR C+ + LR C+
Sbjct: 48 SVHLRMCGVRSVHLPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCSACSVHLRMCSAC 107
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+ LR C+ + LR C+ + LR C+ + LR C
Sbjct: 108 SVHLRMCSACSVHLRMCSVCSVDLRMCSVCSVHLRMC 144
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ L C+ + LR C+ + LR C + L C+ + LR C+ + LR C+
Sbjct: 28 SVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVHLPMCSACSVHLRMCSVCSVHLRMCSAC 87
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ LR C+ + LR C+ + LR C+ + LR C+
Sbjct: 88 SVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSV 126
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 47/98 (47%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ LR C+ + L C+ + LR C+ + LR C + L C+ + LR C+
Sbjct: 18 SVHLRMCSVRSVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVHLPMCSACSVHLRMCSVC 77
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+ LR C+ + LR C+ + LR C+ + LR C+
Sbjct: 78 SVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCS 115
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 46/98 (46%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ R C+ + LR C+ + L C+ + LR C+ + LR C + L C+
Sbjct: 8 SVHFRMCSVCSVHLRMCSVRSVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVHLPMCSAC 67
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+ LR C+ + LR C+ + LR C+ + LR C+
Sbjct: 68 SVHLRMCSVCSVHLRMCSACSVHLRMCSACSVHLRMCS 105
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
R C+ + R C+ + LR C+ + L C+ + LR C+ + LR C +
Sbjct: 1 FRMCSVCSVHFRMCSVCSVHLRMCSVRSVHLPMCSVCSVHLRMCSVCSVHLRMCGVRSVH 60
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L C+ + LR C+ + LR C+ + LR C+
Sbjct: 61 LPMCSACSVHLRMCSVCSVHLRMCSACSVHLRMCS 95
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ LR C+ + LR C+ + LR C+ + LR C+ + LR C+ + LR C+
Sbjct: 78 SVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSVCSVDLRMCSVC 137
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+ LR C + + + LR C+ + LR C
Sbjct: 138 SVHLRMCGACSVHFHMFSACSVHLRMCSACSVHLRKC 174
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 20/117 (17%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
+ LR C+ + LR C+ + LR C+ + LR C+ + LR C+ + LR C
Sbjct: 88 SVHLRMCSACSVHLRMCSACSVHLRMCSACSVHLRMCSVCSVDLRMCSVCSVHLRMCGAC 147
Query: 61 -------NTGGLGLRNCNTGGLGLRNC----------NTGGLGLRNCNTGGLGLRNC 100
+ + LR C+ + LR C + + LR C+ + LR C
Sbjct: 148 SVHFHMFSACSVHLRMCSACSVHLRKCGACSVHFRMFSACSVHLRMCSVCSVHLRMC 204
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----------NTGGLGLRNCNTG 53
+ LR C+ + LR C+ + LR C+ + LR C + + LR C+
Sbjct: 108 SVHLRMCSACSVHLRMCSVCSVDLRMCSVCSVHLRMCGACSVHFHMFSACSVHLRMCSAC 167
Query: 54 GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+ LR C + R + + LR C+ + LR C + LR C
Sbjct: 168 SVHLRKCGACSVHFRMFSACSVHLRMCSVCSVHLRMCGVCSVHLRMC 214
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 10/112 (8%)
Query: 4 GLGLRNCNTGGLGLRNC----------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 53
+ LR C+ + LR C + + LR C+ + LR C + R +
Sbjct: 128 SVDLRMCSVCSVHLRMCGACSVHFHMFSACSVHLRMCSACSVHLRKCGACSVHFRMFSAC 187
Query: 54 GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ LR C+ + LR C + LR C + R C + LR C R +
Sbjct: 188 SVHLRMCSVCSVHLRMCGVCSVHLRMCGACSVHFRMCGACSVHLRMCGARSV 239
>gi|440893796|gb|ELR46445.1| hypothetical protein M91_13311, partial [Bos grunniens mutus]
Length = 158
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR+C G LR+C G LR+C G LR+C G LR+C G LRSC
Sbjct: 10 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 69
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR+C G LR+C G LR+C G LR+C
Sbjct: 70 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 106
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR+C G LR+C G LR+C G LR+C G LR+C G LRSC
Sbjct: 20 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 79
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR+C G LR+C G LR+C G LR+C
Sbjct: 80 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 116
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR+C G LR+C G LR+C G LR+C G LR+C G LRSC
Sbjct: 30 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 89
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR+C G LR+C G LR+C G LR+C
Sbjct: 90 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 126
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR+C G LR+C G LR+C G LR+C G LR+C G LRSC
Sbjct: 40 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 99
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR+C G LR+C G LR+C G LR+C
Sbjct: 100 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 136
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR+C G LR+C G LR+C G LR+C G LR+C G LRSC
Sbjct: 50 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 109
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR+C G LR+C G LR+C G LR+C
Sbjct: 110 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 146
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 50/97 (51%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR+C G LR+C G LR+C G LR+C G LR+C G LRSC
Sbjct: 60 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKV 119
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR+C G LR+C G LR+C G LR+C
Sbjct: 120 GTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 156
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
+ C G LR+C G LR+C G LR+C G LR+C G LRSC G L
Sbjct: 4 KRCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSCAKVGTHL 63
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
R+C G LR+C G LR+C G LR+C
Sbjct: 64 RSCAKVGTHLRSCAKVGTHLRSCAKVGTHLRSC 96
>gi|156385486|ref|XP_001633661.1| predicted protein [Nematostella vectensis]
gi|156220734|gb|EDO41598.1| predicted protein [Nematostella vectensis]
Length = 101
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 47/98 (47%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LR C LR C G LR C+ G LR C T G LR C T G LR C T G
Sbjct: 2 LRPCTGSSGSLRPCTGSGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGP 61
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR C T G LR C T G LR C T G LR C T G
Sbjct: 62 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCTTSG 99
>gi|119625498|gb|EAX05093.1| TBC1 domain family, member 9, isoform CRA_b [Homo sapiens]
Length = 441
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ + +R CN + +R CN + +R CN + +R CN + +R CN + +R CN
Sbjct: 64 AYFVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCN 123
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+ +R CN + +R CN + +R CN + +R CN
Sbjct: 124 AYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCN 163
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+R CN + +R CN + +R CN + +R CN + +R CN + +R CN +
Sbjct: 99 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVC 158
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTG 110
+R CN + +R CN + +R CN + +R CN + TG
Sbjct: 159 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVWMPTG 202
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+R CN + +R CN + +R CN + +R CN + +R CN + +R CN +
Sbjct: 79 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVC 138
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+R CN + +R CN + +R CN + +R CN
Sbjct: 139 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCN 173
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+R CN + +R CN + +R CN + +R CN + +R CN + +R CN +
Sbjct: 89 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCNAYIVC 148
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+R CN + +R CN + +R CN + +R CN
Sbjct: 149 IRVCNAYIVCIRVCNAYIVCIRVCNAYIVCIRVCN 183
>gi|229595232|ref|XP_001018904.3| RE04347p, putative [Tetrahymena thermophila]
gi|225566318|gb|EAR98659.3| RE04347p, putative [Tetrahymena thermophila SB210]
Length = 603
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 6 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT- 62
G+ N GG ++N N GG G++N N GG G++N N G +N N GG ++ N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
GG G +N N G +N N G G +N N GG G++N
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQGGYGMQN 485
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 2 SGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-GGLGLR 58
GG ++N N GG G++N N GG G++N N G +N N GG +N N GG G +
Sbjct: 397 QGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQAGGYGQQ 454
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 89
+ N G +N N G G +N N GG G++N
Sbjct: 455 NLNQVGFAQQNMNQVGYGQQNINQGGYGMQN 485
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 16 GLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNT- 72
G+ N GG ++N N GG G++N N GG G++N N G ++ N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GG G +N N G +N N G G +N N
Sbjct: 449 GGYGQQNLNQVGFAQQNMNQVGYGQQNINQ 478
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 46 GLRNCNTGGLGLRS--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G+ N GG +++ N GG G++N N GG G++N N G +N N GG +N N
Sbjct: 391 GINTMNQGGYSMQNNGMNQGGYGMQNMNQGGYGMQNTNQ--YGQQNMNQGGFAQQNMNQA 448
Query: 104 G 104
G
Sbjct: 449 G 449
>gi|156388151|ref|XP_001634565.1| predicted protein [Nematostella vectensis]
gi|156221649|gb|EDO42502.1| predicted protein [Nematostella vectensis]
Length = 188
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 41/104 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC T G NC T G NC T G NC T G +C
Sbjct: 41 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 100
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 101 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 144
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 41/104 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC T G NC T G NC T G NC T G +C
Sbjct: 51 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 110
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 111 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 154
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 41/104 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC T G NC T G NC T G NC T G +C
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 120
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 121 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 164
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 41/104 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC T G NC T G NC T G NC T G +C
Sbjct: 71 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 130
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 131 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 174
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 41/104 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC T G NC T G NC T G NC T G +C
Sbjct: 81 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 140
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 141 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 184
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 39/98 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC T G NC T G NC T G NC T G +C
Sbjct: 91 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 150
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
T G NC T G NC T G NC T G N
Sbjct: 151 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNN 188
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 40/104 (38%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G C T G NC T G NC T G NC T G +C
Sbjct: 21 THEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 80
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 81 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 124
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 40/104 (38%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G C T G NC T G NC T G NC T G NC T G +C
Sbjct: 31 THEYGWNICCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCC 90
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 91 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 134
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 39/101 (38%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
G NC T G NC T G C T G NC T G NC T G +C T
Sbjct: 14 YGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHE 73
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
G NC T G NC T G NC T G NC T
Sbjct: 74 YGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 114
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 39/104 (37%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC G NC T G NC T G C T G NC T G +C
Sbjct: 1 THEYGWNNCCIHEYGWNNCCTHEYGWNNCCTHEYGWNICCTHEYGWNNCCTHEYGWNNCC 60
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
T G NC T G NC T G NC T G NC T
Sbjct: 61 THEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEYGWNNCCTHEY 104
>gi|407641927|ref|YP_006805686.1| histidine kinase [Nocardia brasiliensis ATCC 700358]
gi|407304811|gb|AFT98711.1| histidine kinase [Nocardia brasiliensis ATCC 700358]
Length = 1183
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
S GL R GGL R +GGL R+ + GL R GL R ++ GL R +
Sbjct: 844 SSGLPQREPGAGGLPQRESASGGLPQRDPSASGLPQRAAGASGLPQREPSS-GLPQRDPS 902
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GGL R GGL R ++ GL R+ + GGL R+ ++ GL
Sbjct: 903 AGGLPQRESAAGGLPQREPSS-GLPQRDPSAGGLPQRDSSSSGL 945
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Query: 2 SGGLGLRNCNTGGLGLRNC---------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 52
SGGL R+ + GL R + GL R+ + GGL R GGL R ++
Sbjct: 864 SGGLPQRDPSASGLPQRAAGASGLPQREPSSGLPQRDPSAGGLPQRESAAGGLPQREPSS 923
Query: 53 GGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPT 112
G L R + GGL R+ ++ GL R+ + L R+ NTGGL R+ L PT
Sbjct: 924 G-LPQRDPSAGGLPQRDSSSSGLPQRDPSGDVLPQRDSNTGGLPSRHAAATSLPQRETPT 982
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
S GL R+ + GGL R GGL R ++G L R+ + GGL R+ ++ GL R +
Sbjct: 893 SSGLPQRDPSAGGLPQRESAAGGLPQREPSSG-LPQRDPSAGGLPQRDSSSSGLPQRDPS 951
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
L R+ NTGGL R+ L R TG
Sbjct: 952 GDVLPQRDSNTGGLPSRHAAATSLPQRETPTG 983
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 47/120 (39%), Gaps = 16/120 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLG 56
GGL R GL R GGL R N GGL R GL R+ N GGL
Sbjct: 758 PGGLPQRQRGENGLPQRESAAGGLPQREPNAGGLPPRQGPNGLPQREGLPPRDPNAGGLP 817
Query: 57 LR--SCNTGGLGLRNC---------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
R + + GL R + GL R GGL R +GGL R+ + GL
Sbjct: 818 QRPSAAPSPGLPQREAGANGLPQREPSSGLPQREPGAGGLPQRESASGGLPQRDPSASGL 877
>gi|156388147|ref|XP_001634563.1| predicted protein [Nematostella vectensis]
gi|156221647|gb|EDO42500.1| predicted protein [Nematostella vectensis]
Length = 125
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 39/107 (36%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+ G NC T G NC T G NC G NC T G NC T G +C
Sbjct: 13 FTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWNNCCTHKYGWNNC 72
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
T G NC T G NC T G NC G NC V
Sbjct: 73 CTNEYGWNNCCTNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVK 119
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 38/99 (38%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G N T G NC T G NC T G NC G NC T G +C
Sbjct: 4 THKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWNNCC 63
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
T G NC T G NC T G NC T G NC
Sbjct: 64 THKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKYGWNNC 102
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 37/97 (38%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
NC T G N T G NC T G NC T G NC G +C T G
Sbjct: 1 NCRTHKYGWNNYFTNEYGWNNCCTHEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWN 60
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NC T G NC T G NC T G NC T
Sbjct: 61 NCCTHKYGWNNCCTNEYGWNNCCTNEYGWNNCCTHKY 97
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 37/102 (36%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ G NC T G NC G NC T G NC T G NC T G +C
Sbjct: 24 THEYGWNNCFTNKFGWNNCFIHEYGWNNCCTHEYGWNNCCTHKYGWNNCCTNEYGWNNCC 83
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
T G NC T G NC G NC NC T
Sbjct: 84 TNEYGWNNCCTHKYGWNNCFIHEYGWNNCFIHEYVKNNCCTH 125
>gi|260797156|ref|XP_002593570.1| hypothetical protein BRAFLDRAFT_88483 [Branchiostoma floridae]
gi|229278795|gb|EEN49581.1| hypothetical protein BRAFLDRAFT_88483 [Branchiostoma floridae]
Length = 287
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 39/101 (38%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G+ T G G+ T G G+ T G G+ T G+ T G+ + T
Sbjct: 20 GAGVETVETTGAGVVTVETTGAGVVTVETTGAGVVTVETTDAGVETMETTDAGVETVETT 79
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ T G G+ T G G+ T G G+ T G
Sbjct: 80 DAGVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTG 120
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 38/99 (38%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G+ T G+ T G G+ T G G+ T G G+ T G G+ + T G
Sbjct: 72 GVETVETTDAGVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTGAGVVAVETTGA 131
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ T G+ T G+ T G G+ T G
Sbjct: 132 GVVTVETTDAGVETVETTDAGVETVETTGAGVVAVETTG 170
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 39/99 (39%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G+ T G G+ T G G+ T G G+ T G G+ T G G+ + T
Sbjct: 82 GVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTGAGVVAVETTGAGVVTVETTDA 141
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ T G+ T G G+ T G G+ T G
Sbjct: 142 GVETVETTDAGVETVETTGAGVVAVETTGAGVVTVETTG 180
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 39/101 (38%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G+ T G G+ T G G+ T G+ T G+ T G+ + T
Sbjct: 30 GAGVVTVETTGAGVVTVETTGAGVVTVETTDAGVETMETTDAGVETVETTDAGVETVETT 89
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G G+ T G G+ T G G+ T G G+ T G
Sbjct: 90 GAGVETVETTGAGVVTVETTGAGVETVETTGAGVVAVETTG 130
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 37/99 (37%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G+ T G+ T G+ T G G+ T G G+ T G G+ + T G
Sbjct: 62 GVETMETTDAGVETVETTDAGVETVETTGAGVETVETTGAGVVTVETTGAGVETVETTGA 121
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ T G G+ T G+ T G+ T G
Sbjct: 122 GVVAVETTGAGVVTVETTDAGVETVETTDAGVETVETTG 160
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 38/99 (38%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G+ T G G+ T G G+ T G G+ T G G+ T G+ + T
Sbjct: 12 GVVTVETTGAGVETVETTGAGVVTVETTGAGVVTVETTGAGVVTVETTDAGVETMETTDA 71
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ T G+ T G G+ T G G+ T G
Sbjct: 72 GVETVETTDAGVETVETTGAGVETVETTGAGVVTVETTG 110
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 37/99 (37%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G+ T G+ T G+ T G+ T G G+ T G G+ + T
Sbjct: 50 GAGVVTVETTDAGVETMETTDAGVETVETTDAGVETVETTGAGVETVETTGAGVVTVETT 109
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ T G G+ T G G+ T G+ T
Sbjct: 110 GAGVETVETTGAGVVAVETTGAGVVTVETTDAGVETVET 148
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 38/100 (38%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G+ T G+ T G G+ T G G+ T G G+ T G G+ + T
Sbjct: 1 MGVDWVGTTDAGVVTVETTGAGVETVETTGAGVVTVETTGAGVVTVETTGAGVVTVETTD 60
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ T G+ T G+ T G G+ T G
Sbjct: 61 AGVETMETTDAGVETVETTDAGVETVETTGAGVETVETTG 100
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 36/91 (39%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G+ T G G+ T G G+ T G G+ T G G+ T G+ + T
Sbjct: 90 GAGVETVETTGAGVVTVETTGAGVETVETTGAGVVAVETTGAGVVTVETTDAGVETVETT 149
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 94
G+ T G G+ T G G+ T G
Sbjct: 150 DAGVETVETTGAGVVAVETTGAGVVTVETTG 180
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 40/122 (32%), Gaps = 21/122 (17%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G+ T G G+ T G G+ T G+ T G+ T G G+ + T
Sbjct: 110 GAGVETVETTGAGVVAVETTGAGVVTVETTDAGVETVETTDAGVETVETTGAGVVAVETT 169
Query: 64 GLGLRNCNTGG---------------------LGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ T G G+ T G G+ T G G+ T
Sbjct: 170 GAGVVTVETTGDRGEKGIADVTFGGNWVETTDAGVETVETTGAGVETVETTGAGVVTVET 229
Query: 103 RG 104
G
Sbjct: 230 TG 231
>gi|156334861|ref|XP_001619542.1| hypothetical protein NEMVEDRAFT_v1g3160 [Nematostella vectensis]
gi|156202977|gb|EDO27442.1| predicted protein [Nematostella vectensis]
Length = 197
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
MS LG+ N ++ LG N + LG N ++ LG N ++ LG N ++ LG +
Sbjct: 51 MSPSLGVHNTDSPSLGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNT 110
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTRGL 105
++ LG N + LG N TG L L NTG LG N ++ L
Sbjct: 111 DSPSLGAHNTGSPSLGAHN--TGSLSLGAHNTGSPSLGAHNTDSPSL 155
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 55/125 (44%), Gaps = 21/125 (16%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--------NTG 53
S LG N ++ LG N ++ LG N ++ LG N ++ LG N NTG
Sbjct: 72 SPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTGSPSLGAHNTG 131
Query: 54 GLGLRSCNTGG--LGLRNCNTGGLGLRN---------CNTGGLGLRNCNTG--GLGLRNC 100
L L + NTG LG N ++ LG + NTG L L NTG LG N
Sbjct: 132 SLSLGAHNTGSPSLGAHNTDSPSLGAPHNTGSPSLGAHNTGSLSLGAHNTGSPSLGAHNT 191
Query: 101 NTRGL 105
++ L
Sbjct: 192 DSPSL 196
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Query: 11 NTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRSCNTGG 64
NTG L NTG LG N + LG+ N ++ LG R+ + LG+ + ++
Sbjct: 5 NTGSPSLGAHNTGNPSLGAHNTGSPSLGVHNTDSPSLGARDYIIVLMSPSLGVHNTDSPS 64
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
LG N + LG N ++ LG N ++ LG N ++ L A
Sbjct: 65 LGAHNTGSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAH 108
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC--------NTGGLGLRNCNTG--GLGLRNCN 51
S LG N ++ LG N ++ LG N NTG L L NTG LG N +
Sbjct: 92 SPSLGAHNTDSPSLGAHNTDSPSLGAHNTGSPSLGAHNTGSLSLGAHNTGSPSLGAHNTD 151
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLG 96
+ LG NTG L NTG L L NTG LG N ++ LG
Sbjct: 152 SPSLGAP-HNTGSPSLGAHNTGSLSLGAHNTGSPSLGAHNTDSPSLG 197
>gi|124808756|ref|XP_001348400.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|23497293|gb|AAN36839.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 1621
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 37/95 (38%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L N N L N N G L N N G L N N G L N N G L + N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
L N N G L N N G L N N G L N
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLPNI 1313
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 35/89 (39%)
Query: 16 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGL 75
L N N L N N G L N N G L N N G L + N G L N N G
Sbjct: 1219 KLSNVNMSSEKLSNVNMSGEKLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGE 1278
Query: 76 GLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L N N G L N N G L N N G
Sbjct: 1279 KLSNVNMSGEKLSNVNMSGEKLSNVNMSG 1307
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
MSG L N N G L N N G L N N G L N N G L N N G L +
Sbjct: 1235 MSGE-KLSNVNMSGEKLSNVNMSGEKLSNINMPGEKLSNVNMSGEKLSNVNMSGEKLSNV 1293
Query: 61 NTGGLGLRNCNTGGLGLRN-CNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
N G L N N G L N C+T + + L L + +V+
Sbjct: 1294 NMSGEKLSNVNMSGEKLPNICSTNEVQI-----DHLELNKIRKKKVVS 1336
>gi|301617161|ref|XP_002938016.1| PREDICTED: hypothetical protein LOC100493501 [Xenopus (Silurana)
tropicalis]
Length = 227
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+SG L L C++G L L C +G L LR+ L LR+ G L LR+ G L LR
Sbjct: 129 LSGTLMLALCHSGTLMLALCLSGTLMLALRHSYVSTLALRHSYVGTLSLRHSYVGTLSLR 188
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G L LR LR+ G L LR G L LR+C
Sbjct: 189 HSYVGTLALR--------LRHSYVGTLSLRLSYVGTLSLRHC 222
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRS 59
SG L L C++G L L C++G L L C +G L L ++G L L C++G L L
Sbjct: 58 SGTLMLALCHSGTLMLALCHSGTLMLALCLSGTLMLALSHSGSGTLMLALCHSGTLMLAL 117
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
C++G L L C +G L L C++G L L C +G L L
Sbjct: 118 CHSGTLMLALCLSGTLMLALCHSGTLMLALCLSGTLML 155
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRSCNT 62
L L + +G L L C++G L L C++G L L C +G L L ++G L L C++
Sbjct: 51 LALWHSGSGTLMLALCHSGTLMLALCHSGTLMLALCLSGTLMLALSHSGSGTLMLALCHS 110
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G L L C++G L L C +G L L C++G L L C
Sbjct: 111 GTLMLALCHSGTLMLALCLSGTLMLALCHSGTLMLALC 148
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 4/105 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
SG L L C +G L L ++G L L C++G L L C++G L L C +G L L
Sbjct: 36 SGTLMLALCLSGTLMLALWHSGSGTLMLALCHSGTLMLALCHSGTLMLALCLSGTLMLAL 95
Query: 60 CNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
++G L L C++G L L C++G L L C +G L L C++
Sbjct: 96 SHSGSGTLMLALCHSGTLMLALCHSGTLMLALCLSGTLMLALCHS 140
>gi|379706935|ref|YP_005262140.1| putative histidine kinase [Nocardia cyriacigeorgica GUH-2]
gi|374844434|emb|CCF61496.1| putative histidine kinase [Nocardia cyriacigeorgica GUH-2]
Length = 1224
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 35/98 (35%), Gaps = 2/98 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL R GL R GL R GGL R GL R GGL R
Sbjct: 807 AGLPQREPGQSGLAPREAGPSGLPQREPAAGGLPQREAGPSGLPQREPAAGGLPQREPAA 866
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
GGL R GGL R GL R GGL R
Sbjct: 867 GGLPQRE--AGGLPQRESGASGLPQREPAAGGLPQRES 902
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 35/99 (35%), Gaps = 4/99 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
GL R GGL R GL R GGL R GGL R GGL R
Sbjct: 826 PSGLPQREPAAGGLPQREAGPSGLPQREPAAGGLPQREPAAGGLPQRE--AGGLPQRESG 883
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
GL R GGL R + R GGL R
Sbjct: 884 ASGLPQREPAAGGLPQRESAANDMPQREA--GGLPEREA 920
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 37/99 (37%), Gaps = 6/99 (6%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GGL R GL R GGL R GGL R GGL R GL R
Sbjct: 836 AGGLPQREAGPSGLPQREPAAGGLPQREPAAGGLPQREA--GGLPQRESGASGLPQREPA 893
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
GGL R + R GGL R GGL R
Sbjct: 894 AGGLPQRESAANDMPQREA--GGLPEREA--GGLPQRAA 928
>gi|156346859|ref|XP_001621553.1| hypothetical protein NEMVEDRAFT_v1g144443 [Nematostella vectensis]
gi|156207621|gb|EDO29453.1| predicted protein [Nematostella vectensis]
Length = 120
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 39/97 (40%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
G R+C G R+C G R C G R+C G R+C G RSC
Sbjct: 1 QGTRSCRQTRQGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTR 60
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R+C G R+C G R+C G R+C
Sbjct: 61 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGARSCR 97
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 39/97 (40%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
G R+C G R C G R+C G R+C G R+C G RSC
Sbjct: 11 QGARSCRQTRQGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTRQGARSCRQTR 70
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R+C G R+C G R+C G R+C
Sbjct: 71 QGARSCRQTRQGARSCRQTRQGARSCRQTRQGTRSCR 107
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 39/97 (40%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
G R C G R+C G R+C G R+C G R+C G RSC
Sbjct: 21 QGARTCRQTRQGTRSCRQTRQGTRSCRQTRQGTRSCRQTRQGARSCRQTRQGARSCRQTR 80
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R+C G R+C G R+C G R+C
Sbjct: 81 QGARSCRQTRQGARSCRQTRQGTRSCRQTRQGTRSCR 117
>gi|340376694|ref|XP_003386867.1| PREDICTED: copine-8-like [Amphimedon queenslandica]
Length = 741
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 41/101 (40%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
SGG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 593 SGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 652
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G TGG G TGG G T
Sbjct: 653 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPT 693
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 46/117 (39%), Gaps = 4/117 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 603 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 662
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT----RGLVAFTGPTQA 114
TGG G TGG G TGG G TGG G T + GP QA
Sbjct: 663 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGKAPYPTVGPGQA 719
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 41/101 (40%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
SGG G TGG G TGG G TGG G +GG G TGG G
Sbjct: 553 SGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPSGGPGQAPYPTGGPGQAPYP 612
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G TGG G TGG G T
Sbjct: 613 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPT 653
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 41/101 (40%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G TGG G TGG G +GG G TGG G TGG G
Sbjct: 563 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 622
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G TGG G TGG G T
Sbjct: 623 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPT 663
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 41/101 (40%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G TGG G +GG G TGG G TGG G TGG G
Sbjct: 573 TGGPGQAPYPTGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 632
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G TGG G TGG G T
Sbjct: 633 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPT 673
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 41/101 (40%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G +GG G TGG G TGG G TGG G TGG G
Sbjct: 583 TGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 642
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G TGG G TGG G T
Sbjct: 643 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPT 683
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 40/101 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
GG G +GG G TGG G TGG G TGG G +GG G
Sbjct: 543 EGGPGQAPYPSGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPSGGPGQAPYP 602
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G TGG G TGG G T
Sbjct: 603 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPT 643
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 40/101 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 633 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 692
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G TGG G T G G TGG G T
Sbjct: 693 TGGPGQAPYPTGGPGKAPYPTVGPGQAPYPTGGPGQAPYPT 733
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 39/95 (41%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 643 TGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYPTGGPGQAPYP 702
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
TGG G T G G TGG G TGG G
Sbjct: 703 TGGPGKAPYPTVGPGQAPYPTGGPGQAPYPTGGPG 737
>gi|406604148|emb|CCH44371.1| Actin cytoskeleton-regulatory complex protein [Wickerhamomyces
ciferrii]
Length = 1215
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 49/103 (47%), Gaps = 7/103 (6%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L + TGG L+ TG + L+ NTGG L+ TG + ++N NTGG L TG +
Sbjct: 422 LAHQQTGGQPLQQQPTGLVPLQGQNTGGQPLKQQPTGLIPIKNQNTGGAPLTQQPTGLVP 481
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFT 109
LRN TG + ++ TGG L T GLV T
Sbjct: 482 LRNQQTGSAPI------SAPIQQTPTGGAPLTQQPT-GLVPLT 517
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLG--LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
L+ TG + L TG G L + TGG L+ TG + L+ NTGG L+
Sbjct: 396 AAPSLQQQPTGLVPLNTQQTGTAGNTLAHQQTGGQPLQQQPTGLVPLQGQNTGGQPLKQQ 455
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
TG + ++N NTGG L TG + LRN TG +
Sbjct: 456 PTGLIPIKNQNTGGAPLTQQPTGLVPLRNQQTGSAPI 492
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RSC 60
+ L+ NTGG L+ TG + ++N NTGG L TG + LRN TG + +
Sbjct: 440 VPLQGQNTGGQPLKQQPTGLIPIKNQNTGGAPLTQQPTGLVPLRNQQTGSAPISAPIQQT 499
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG L TG + L TG + L+ TG L++ T
Sbjct: 500 PTGGAPLTQQPTGLVPLTTTATGSVALQTQLTGPAPLQSQRT 541
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLGL 57
+GG L+ TG + ++N NTGG L TG + LRN TG + + TGG L
Sbjct: 447 TGGQPLKQQPTGLIPIKNQNTGGAPLTQQPTGLVPLRNQQTGSAPISAPIQQTPTGGAPL 506
Query: 58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
TG + L TG + L+ TG L++ TG
Sbjct: 507 TQQPTGLVPLTTTATGSVALQTQLTGPAPLQSQRTG 542
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 6 GLRNCNTGGL-----GLRNCNTGGL-----GLRNCNTGGLG----LRNCNTGGLGLRNCN 51
G +N +T GL G +N +T GL GL T G G L+ TG + L
Sbjct: 355 GFQNQSTTGLTQQPTGFQNQSTTGLTQQPTGLIPLKTQGTGAAPSLQQQPTGLVPLNTQQ 414
Query: 52 TGGLG--LRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG G L TGG L+ TG + L+ NTGG L+ TG + ++N NT
Sbjct: 415 TGTAGNTLAHQQTGGQPLQQQPTGLVPLQGQNTGGQPLKQQPTGLIPIKNQNT 467
>gi|73670411|ref|YP_306426.1| hypothetical protein Mbar_A2951 [Methanosarcina barkeri str.
Fusaro]
gi|72397573|gb|AAZ71846.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 286
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 44/108 (40%), Gaps = 10/108 (9%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGGLGLR 58
G L+ + G+ LR N G L N G LR N GG LR N GG LR
Sbjct: 41 GANLKELSFEGVNLREANLLGANLEKANLLGANLEGADLRETNLGGADLREANLGGADLR 100
Query: 59 SCNTGGLGL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
N G L R N GG LR N GG LR N G LR N
Sbjct: 101 EANLEGADLEGADLRETNLGGADLREANLGGADLREANLEGADLRETN 148
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 40/98 (40%), Gaps = 5/98 (5%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR N GG LR N GG LR N G L G LR N GG LR N G
Sbjct: 76 GADLRETNLGGADLREANLGGADLREANLEGADLE-----GADLRETNLGGADLREANLG 130
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G LR N G LR N L + G L+ N
Sbjct: 131 GADLREANLEGADLRETNLLEANLEGASLEGANLKVAN 168
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 40/103 (38%), Gaps = 10/103 (9%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG LR N GG LR N G L G LR N GG LR N GG LR N
Sbjct: 85 GGADLREANLGGADLREANLEGADLE-----GADLRETNLGGADLREANLGGADLREANL 139
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
G LR N L N G L N L N +G+
Sbjct: 140 EGADLRETN-----LLEANLEGASLEGANLKVANLERANLKGV 177
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 36/104 (34%), Gaps = 10/104 (9%)
Query: 3 GGLGLRNCNTGGLGL-----RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 57
GG LR N G L R N GG LR N GG LR N G LR N L
Sbjct: 95 GGADLREANLEGADLEGADLRETNLGGADLREANLGGADLREANLEGADLRETN-----L 149
Query: 58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
N G L N L N G+ L L+ N
Sbjct: 150 LEANLEGASLEGANLKVANLERANLKGVNLIEAELSWAELKGAN 193
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 32/80 (40%), Gaps = 5/80 (6%)
Query: 24 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTG 83
G L+ + G+ LR N G L N G N G LR N GG LR N G
Sbjct: 41 GANLKELSFEGVNLREANLLGANLEKANLLG-----ANLEGADLRETNLGGADLREANLG 95
Query: 84 GLGLRNCNTGGLGLRNCNTR 103
G LR N G L + R
Sbjct: 96 GADLREANLEGADLEGADLR 115
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 34 GLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
G L+ + G+ LR N G L N G N G LR N GG LR N G
Sbjct: 41 GANLKELSFEGVNLREANLLGANLEKANLLG-----ANLEGADLRETNLGGADLREANLG 95
Query: 94 GLGLRNCNTRG 104
G LR N G
Sbjct: 96 GADLREANLEG 106
>gi|156330405|ref|XP_001619111.1| hypothetical protein NEMVEDRAFT_v1g152333 [Nematostella vectensis]
gi|156201633|gb|EDO27011.1| predicted protein [Nematostella vectensis]
Length = 128
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGG-------------LGLRNCNTGGLG-LRNCNT 52
LR C T G LR C T G LR C T G LR TG G LR C
Sbjct: 10 LRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLAYSPWFCLFCEPLRP-RTGSSGSLRPCTG 68
Query: 53 GGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G LR C+ G LR C T G LR C T G LR C T G LR C
Sbjct: 69 SGGSLRPCSVSGGSLRPCTTSGGPLRPCTTSGGPLRPCTTSGGPLRPCT 117
>gi|50550763|ref|XP_502854.1| YALI0D15304p [Yarrowia lipolytica]
gi|74689588|sp|Q6C908.1|PAN1_YARLI RecName: Full=Actin cytoskeleton-regulatory complex protein PAN1
gi|49648722|emb|CAG81042.1| YALI0D15304p [Yarrowia lipolytica CLIB122]
Length = 1634
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 MSGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
++GG+ L+ TG + L+ +TG L++ TGG L++ TGG L++ TGG L+S
Sbjct: 399 ITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQS 458
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TGG L+ +TG L+ +TG L+ +TG + +
Sbjct: 459 QLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGYMPQQQT 499
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 6 GLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
++ TGG+ L+ TG + L+ +TG L++ TGG L++ TGG L+S TGG
Sbjct: 394 AMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTGG 453
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L++ TGG L+ +TG L+ +TG L+ +T
Sbjct: 454 APLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQST 491
>gi|426252498|ref|XP_004019948.1| PREDICTED: LOW QUALITY PROTEIN: EH domain-binding protein 1-like
protein 1 [Ovis aries]
Length = 1786
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 858 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 917
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 918 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 958
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 878 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 937
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 938 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 978
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 898 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 957
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 958 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 998
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 918 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 977
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 978 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1018
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 938 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 997
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 998 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1038
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 958 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1017
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1018 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1058
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 978 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1037
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1038 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1078
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 998 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1057
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1058 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1098
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 1018 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1077
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1078 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1118
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 1038 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1097
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1098 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1138
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 1058 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1117
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1118 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1158
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 1078 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1137
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1138 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1178
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 1098 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1157
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1158 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1198
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 1118 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 1177
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 1178 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 1218
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 838 LRTRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 897
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 898 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 938
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 37/101 (36%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L +R GG G +T L R GG G +T L R GG G +T
Sbjct: 798 LRIRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTEP 857
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 858 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 898
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 36/101 (35%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L R GG G +T L R GG G +T L R GG G +T
Sbjct: 818 LRTRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEP 877
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L R GG G +T L R GG G +T L
Sbjct: 878 LRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 918
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 36/102 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1126 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1185
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
GG G +T L R GG G +T L R G
Sbjct: 1186 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEAPG 1227
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 846 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 905
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 906 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 944
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 866 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 925
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 926 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 964
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 886 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 945
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 946 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 984
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 906 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 965
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 966 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1004
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 926 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 985
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 986 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1024
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 946 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1005
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1006 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1044
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 966 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1025
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1026 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1064
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 986 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1045
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1046 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1084
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1006 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1065
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1066 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1104
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1026 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1085
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1086 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1124
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1046 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1105
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1106 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1144
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1066 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1125
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1126 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1164
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1086 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1145
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1146 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1184
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 1106 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 1165
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 1166 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 1204
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 826 GGSGAPEMDTETLRTRETEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETEV 885
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 886 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 924
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 37/100 (37%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G +T L +R GG G +T L R GG G +T L R
Sbjct: 785 AGGSGTPEMDTETLRIRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRETE 844
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 845 VGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 884
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G +T L R GG G +T L R GG G +T L R
Sbjct: 806 GGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTEPLRPRETEV 865
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG G +T L R GG G +T L R
Sbjct: 866 GGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPLRPRETE 904
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 35/96 (36%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
GG G +T L +R GG G +T L R GG G +T L R
Sbjct: 783 IEAGGSGTPEMDTETLRIRETEVGGSGAPEMDTETLRTRETEVGGSGAPEMDTETLRTRE 842
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GG G +T L R GG G +T L
Sbjct: 843 TEVGGSGAPEMDTEPLRPRETEVGGSGAPEMDTEPL 878
>gi|260837288|ref|XP_002613637.1| hypothetical protein BRAFLDRAFT_226947 [Branchiostoma floridae]
gi|229299023|gb|EEN69646.1| hypothetical protein BRAFLDRAFT_226947 [Branchiostoma floridae]
Length = 142
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 37/94 (39%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+R C +R C G+R C G+R C G+R C G+R C
Sbjct: 38 IRTCCCYSCWIRICCWKSCGIRICCWKSCGIRICCWKSYGIRICCWKSCGIRICCCYSCR 97
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+R C G+R C G+R C G+R C
Sbjct: 98 IRICCWKSCGIRICCWKSCGIRICCWKSCGIRIC 131
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 38/95 (40%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
+R C G+R C G+R C G+R C G+R C +R C
Sbjct: 47 WIRICCWKSCGIRICCWKSCGIRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKSC 106
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+R C G+R C G+R C G+R C
Sbjct: 107 GIRICCWKSCGIRICCWKSCGIRICCWNSCGIRIC 141
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 37/99 (37%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G+R C G+ C +R C +R C G+R C G+R C
Sbjct: 17 GIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCGIRICCWKSY 76
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+R C G+R C +R C G+R C +
Sbjct: 77 GIRICCWKSCGIRICCCYSCRIRICCWKSCGIRICCWKS 115
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 36/98 (36%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+R C G+R C G+ C +R C +R C G+R C G
Sbjct: 8 IRTCCCYSCGIRICCWKSCGICICCWKSWRIRTCCCYSCWIRICCWKSCGIRICCWKSCG 67
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+R C G+R C G+R C +R C +
Sbjct: 68 IRICCWKSYGIRICCWKSCGIRICCCYSCRIRICCWKS 105
>gi|340719157|ref|XP_003398023.1| PREDICTED: hypothetical protein LOC100645253 [Bombus terrestris]
Length = 2096
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 41/108 (37%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
G R N G R+ + G G R N G R G G R G G R+ N G
Sbjct: 1090 FGPRALNDGQFDPRSSSDGQFGPRASNNAQFGPRGLGDGQYGPRGTGDGQFGPRAPNDGQ 1149
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-----TRGLVA 107
G R N G R N G G R+ N G G R N TRG V
Sbjct: 1150 FGQRGPNDAQFGPRGPNDGQFGPRSVNDGMFGPRGPNDGLFGTRGPVE 1197
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 36/97 (37%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R G G R N G G R N G R N G G R+ N G G R N
Sbjct: 1127 DGQYGPRGTGDGQFGPRAPNDGQFGQRGPNDAQFGPRGPNDGQFGPRSVNDGMFGPRGPN 1186
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
G G R GLR N G R N G G R
Sbjct: 1187 DGLFGTRGPVENQFGLRAPNNVQFGPRPSNIGQFGPR 1223
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 36/98 (36%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
LG R N G R N G R+ + G G R N G R G G R G
Sbjct: 1079 SLGPRGPNDVQFGPRALNDGQFDPRSSSDGQFGPRASNNAQFGPRGLGDGQYGPRGTGDG 1138
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R N G G R N G R N G G R+ N
Sbjct: 1139 QFGPRAPNDGQFGQRGPNDAQFGPRGPNDGQFGPRSVN 1176
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 36/100 (36%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R N G R G G R G G R N G G R N G R N
Sbjct: 1107 DGQFGPRASNNAQFGPRGLGDGQYGPRGTGDGQFGPRAPNDGQFGQRGPNDAQFGPRGPN 1166
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G G R+ N G G R N G G R GLR N
Sbjct: 1167 DGQFGPRSVNDGMFGPRGPNDGLFGTRGPVENQFGLRAPN 1206
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 33/89 (37%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
G G R G G R N G G R N G R N G G RS N G G R N
Sbjct: 1128 GQYGPRGTGDGQFGPRAPNDGQFGQRGPNDAQFGPRGPNDGQFGPRSVNDGMFGPRGPND 1187
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G G R GLR N G R N
Sbjct: 1188 GLFGTRGPVENQFGLRAPNNVQFGPRPSN 1216
>gi|350396132|ref|XP_003484453.1| PREDICTED: hypothetical protein LOC100748236 [Bombus impatiens]
Length = 2092
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 36/97 (37%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R G G R N G G R N G R N G G R+ N G G R N
Sbjct: 1122 DGQYGPRGTGDGQFGPRASNDGQFGQRGPNDAQFGPRGPNDGQFGPRSINDGMFGPRGPN 1181
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
G G R GLR N G R N G G R
Sbjct: 1182 DGLFGTRGPVENQFGLRAPNNAQFGPRPSNIGQFGPR 1218
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
G R N G R N G G R N G R G G R G G R+ N G
Sbjct: 1085 FGPRALNDGQFDSRGSNDGQFGPRASNNTQFGPRGLGDGQYGPRGTGDGQFGPRASNDGQ 1144
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN-----TRGLVA 107
G R N G R N G G R+ N G G R N TRG V
Sbjct: 1145 FGQRGPNDAQFGPRGPNDGQFGPRSINDGMFGPRGPNDGLFGTRGPVE 1192
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 33/89 (37%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
G G R G G R N G G R N G R N G G RS N G G R N
Sbjct: 1123 GQYGPRGTGDGQFGPRASNDGQFGQRGPNDAQFGPRGPNDGQFGPRSINDGMFGPRGPND 1182
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G G R GLR N G R N
Sbjct: 1183 GLFGTRGPVENQFGLRAPNNAQFGPRPSN 1211
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 35/98 (35%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
LG R N G R N G R N G G R N G R G G R G
Sbjct: 1074 SLGPRGPNDVQFGPRALNDGQFDSRGSNDGQFGPRASNNTQFGPRGLGDGQYGPRGTGDG 1133
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R N G G R N G R N G G R+ N
Sbjct: 1134 QFGPRASNDGQFGQRGPNDAQFGPRGPNDGQFGPRSIN 1171
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 36/100 (36%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R N G R G G R G G R N G G R N G R N
Sbjct: 1102 DGQFGPRASNNTQFGPRGLGDGQYGPRGTGDGQFGPRASNDGQFGQRGPNDAQFGPRGPN 1161
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G G R+ N G G R N G G R GLR N
Sbjct: 1162 DGQFGPRSINDGMFGPRGPNDGLFGTRGPVENQFGLRAPN 1201
>gi|432949432|ref|XP_004084207.1| PREDICTED: kinesin-like protein KIF16B-like, partial [Oryzias
latipes]
Length = 492
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL + G +GL ++G +GL +C GL + +C G +GL +C GL + SC
Sbjct: 369 GQMGLVVASCGQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASCGQMGLDVASCGQ 426
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
GL + +C GL + +C GL + +C G +GL +C GLV
Sbjct: 427 MGLDVASCGQMGLDVASCGQMGLDVASC--GQMGLASCGQMGLVV 469
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
SG +GL +C GL + +C G +GL +C GL + +C GL + +C GL + SC
Sbjct: 388 SGQMGLASCGQMGLDVASC--GQMGLASCGQMGLDVASCGQMGLDVASCGQMGLDVASCG 445
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL + +C G +GL +C GL + +C GL + +C GL
Sbjct: 446 QMGLDVASC--GQMGLASCGQMGLVVASCGQMGLDVASCGQMGL 487
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL + G +GL + G +GL ++G +GL +C GL + +C G +GL SC
Sbjct: 359 GQMGLDVASCGQMGLVVASCGQMGLDVASSGQMGLASCGQMGLDVASC--GQMGLASCGQ 416
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
GL + +C GL + +C GL + +C GL + +C GL +
Sbjct: 417 MGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLAS 461
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL + G +GL +C GL + +C G +GL +C GL + +C GL + SC
Sbjct: 313 GQMGLDVASCGQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASCGQMGLDVASCGQ 370
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
GL + +C G +GL ++G +GL +C GL + +C GL +
Sbjct: 371 MGLVVASC--GQMGLDVASSGQMGLASCGQMGLDVASCGQMGLAS 413
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL + G +GL +C GL + +C GL + +C GL + +C GL + SC
Sbjct: 397 GQMGLDVASCGQMGLASCGQMGLDVASCGQMGLDVASCGQMGLDVASCGQMGLDVASC-- 454
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +GL +C GL + +C GL + +C GL + +C
Sbjct: 455 GQMGLASCGQMGLVVASCGQMGLDVASCGQMGLDVASC 492
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GL + +C GL + +C G +GL +C GL + +C G +GL +C GL + SC
Sbjct: 306 GLDVASCGQMGLDVASC--GQMGLASCGQMGLDVASC--GQMGLASCGQMGLVVASCGQM 361
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL + +C GL + +C G +GL ++G +GL +C GL
Sbjct: 362 GLDVASCGQMGLVVASC--GQMGLDVASSGQMGLASCGQMGL 401
>gi|433629402|ref|YP_007263030.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
gi|432160995|emb|CCK58330.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070010]
Length = 3175
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTGG N NTG + NTG N NT ++
Sbjct: 352 TGNFNTGNYNTGGFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIS 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSFNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G G N + +GL N +G +GL N TG G+ N TG GL N NTG
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NTGG N NT
Sbjct: 341 NTGGFNPGSYNTG-----NFNTG-----NYNTGGFNAGNYNT 372
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2947 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3006
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG N NTG + NTGG + NTG L + NT
Sbjct: 3007 NTGLFNPGNVNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3048
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT----------GG 54
+GL N LG N + +GL N + LG N + +G N + G
Sbjct: 2886 IGLANLGDDNLGFGNAGSYNIGLANLGSANLGFANTGSNNIGFANTGSGNIGIGLTGNGQ 2945
Query: 55 LGLRSCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G+ S N+G +GL N +G +G N TG +G+ N TG GL N
Sbjct: 2946 IGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANS 2993
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G+GL G G N + +GL N +G +GL N TG G+ + TG
Sbjct: 261 GFGNTGSNNIGIGLTGDGQIGFGSFNSGSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTG 320
Query: 64 GLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
GL N NTG + NTGG + NTG N NT G A
Sbjct: 321 NFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTGNYNTGGFNA 367
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 46/111 (41%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2458 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSYNTGLGNTGSTNTGLFNPGNVN 2517
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG L + NTG L + NTG + NTG + NT
Sbjct: 2518 TGVGNTGSINTGSFNLGDHNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2568
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G+ N +G N +G N + +G N +G +G+ TG +G S N+G
Sbjct: 2396 IGVANLGNYSVGFGNSGNYHIGFANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2455
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2456 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2493
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 41/97 (42%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTGG + NTG + NTG N NTG
Sbjct: 359 NYNTGGFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N + +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGFANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +G N TG +G+ N TG GL N NTG + NTG + N
Sbjct: 2958 IGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGLFNPGNVN 3017
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG + NTGG + NTG L + NTG + +T ++
Sbjct: 3018 TGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANTGDVDTGAFIS 3063
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 5 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G N +G G+ N NTG N NTG + NTG + NTG S N
Sbjct: 1196 IGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFN 1255
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TGG N NTG L + N NTG + +TG
Sbjct: 1256 TGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSC 60
G G N + +GL N G +G N TG +G+ N T G+ N + GL S
Sbjct: 2447 GFGSFNSGSHNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSYNTGLGNTGST 2506
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG N NTG + NTG L + NTG L + NT
Sbjct: 2507 NTGLFNPGNVNTGVGNTGSINTGSFNLGDHNTGSFNLGDHNT 2548
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGFANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2465 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSYNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2524
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG L NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2525 SINTGSFNLGDHNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2583
>gi|31794530|ref|NP_857023.1| hypothetical protein Mb3380c [Mycobacterium bovis AF2122/97]
gi|31620126|emb|CAD95515.1| PPE FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length = 2096
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTAAF 1613
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
+G GL N + G+ N TG GL N + GL N NTG L N NTGG
Sbjct: 1527 TGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPG 1586
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFT 109
+ NTG + NTGG N NT + N G L + GLV F+
Sbjct: 1587 NVNTGWFNAGHTNTGGFNTGNVNTAAFNSGSFNNG--ALWTGDHHGLVGFS 1635
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
>gi|121639274|ref|YP_979498.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991771|ref|YP_002646460.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378773135|ref|YP_005172868.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449065459|ref|YP_007432542.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121494922|emb|CAL73406.1| PPE Family protein [first part] [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224774886|dbj|BAH27692.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603299|emb|CCC65978.1| PPE Family protein [first part] [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|356595456|gb|AET20685.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449033967|gb|AGE69394.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 2096
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTAAF 1613
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 49/111 (44%), Gaps = 5/111 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
+G GL N + G+ N TG GL N + GL N NTG L N NTGG
Sbjct: 1527 TGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPG 1586
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFT 109
+ NTG + NTGG N NT + N G L + GLV F+
Sbjct: 1587 NVNTGWFNAGHTNTGGFNTGNVNTAAFNSGSFNNG--ALWTGDHHGLVGFS 1635
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
>gi|433640434|ref|YP_007286193.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
gi|432156982|emb|CCK54251.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070008]
Length = 3180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSFNTGSFNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LG N + +G N + LG N + +G N +G+ G +G+ S N+G
Sbjct: 2901 LGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGIGLTGNGQIGIGSLNSGS 2960
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N +G +G N TG +G+ N TG GL N
Sbjct: 2961 NNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANS 2998
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2952 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3011
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTGG + NTG + NTG L + NT
Sbjct: 3012 NTGLFNPGDLNTGGFNPGSFNTGSFNPGSGNTGYLNTGDYNT 3053
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N + +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 5 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G N +G G+ N NTG N NTG + NTG + NTG S N
Sbjct: 1196 IGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFN 1255
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TGG N NTG L + N NTG + +TG
Sbjct: 1256 TGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N +GL N +G N +G+ N + +G N +G +G+ TG
Sbjct: 2392 VGFANVGNHNIGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQ 2451
Query: 65 LGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+G + N+G +GL N G +G N TG +G+ N T
Sbjct: 2452 IGFGSFNSGSHNIGLFNSGHGNVGFFNSGTGNVGIGNTGTA 2492
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGFANTGSNNIGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSFNTGSFNTGGFNA 797
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGHGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGFANTGSNNIGFANTGSNNIGIGLTGTGRIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 47/118 (39%), Gaps = 13/118 (11%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRN 49
G +G N TG +G+ N T G+ N NTG N NTG +
Sbjct: 2472 GNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTGS 2531
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2532 INTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|433633322|ref|YP_007266949.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432164915|emb|CCK62379.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 3181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG N NTGG + NTGG + NTG L + NT
Sbjct: 3013 NTGVFNPGNVNTGGFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3054
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 12/108 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN----------CNTGG 54
+GL N LG N + +GL N + LG N + +G N G
Sbjct: 2892 IGLANLGDDNLGFGNAGSYNIGLANLGSANLGFANTGSNNIGFANTGNNNIGIGLTGNGQ 2951
Query: 55 LGLRSCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G+ S N+G +GL N +G +G N TG +G+ N TG GL N
Sbjct: 2952 IGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANS 2999
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N + +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSNNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G+GL G G N + +GL N +G +GL N TG G+ + TG
Sbjct: 261 GFGNTGSNNIGIGLTGNGQIGFGSFNSGSHNIGLFNSGSGNIGLFNSGTGNFGIGNSGTG 320
Query: 64 GLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTGG + NTG N NT
Sbjct: 321 NFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 3/94 (3%)
Query: 5 LGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G N +G G+ N NTG N NTG + NTG + NTG S N
Sbjct: 1196 IGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPGSFNTGSFNTGSFN 1255
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TGG N NTG L + N NTG + +TG
Sbjct: 1256 TGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGFANTGSNNIGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNIGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGFANTGSNNIGFANTGSNNIGIGLTGTGRIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN------------ 49
G +G N TG +G+ N T G+ N + GL N + GL N
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNIGVGNTG 2530
Query: 50 -CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGRIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
>gi|193214429|ref|YP_001995628.1| pentapeptide repeat-containing protein [Chloroherpeton thalassium
ATCC 35110]
gi|193087906|gb|ACF13181.1| pentapeptide repeat protein [Chloroherpeton thalassium ATCC 35110]
Length = 694
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 42/109 (38%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G L + G L N G LR+ G LR+ N G LR+ N G LRS N
Sbjct: 537 GADLSDAKLQGAVLSFANLQGADLRSAKLQGADLRSANLQGADLRSANLQGAYLRSANLQ 596
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPT 112
G LR+ G L N G L + G LRN F G T
Sbjct: 597 GAYLRSAKLQGADLSEANLQGADLDSAKLQGAYLRNIEIDEKTDFNGAT 645
>gi|340625336|ref|YP_004743788.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|433625404|ref|YP_007259033.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140060008]
gi|340003526|emb|CCC42647.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|432153010|emb|CCK50221.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140060008]
Length = 3181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
NTG + NTG + NTGG + NTG L
Sbjct: 3013 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYL 3047
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2530
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|306970504|ref|ZP_07483165.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|307078232|ref|ZP_07487402.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308359899|gb|EFP48750.1| PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308363801|gb|EFP52652.1| PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 3186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2958 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3017
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3018 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3059
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2579
>gi|306806111|ref|ZP_07442779.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|306966309|ref|ZP_07478970.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308347367|gb|EFP36218.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308355942|gb|EFP44793.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 3186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2958 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3017
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3018 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3059
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2579
>gi|254549250|ref|ZP_05139697.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|297632792|ref|ZP_06950572.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297729767|ref|ZP_06958885.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|306782933|ref|ZP_07421255.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306796040|ref|ZP_07434342.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|313657096|ref|ZP_07813976.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|392385024|ref|YP_005306653.1| PPE6 [Mycobacterium tuberculosis UT205]
gi|308332211|gb|EFP21062.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308343506|gb|EFP32357.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|378543575|emb|CCE35846.1| PPE6 [Mycobacterium tuberculosis UT205]
Length = 3186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2958 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3017
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3018 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3059
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2579
>gi|385997079|ref|YP_005915377.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344218125|gb|AEM98755.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 3191
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2027 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2086
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2087 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2128
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + + NTG + + NTGG N NTG + NT
Sbjct: 779 SYNTGSVNTGSVNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNT 822
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
SG G+ N TG G+ N G G+ N + GL N NTG L + NTG +
Sbjct: 729 SGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTG 788
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 789 SVNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 837
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2407 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2466
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2467 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2504
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2963 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3022
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3023 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3064
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 2 SGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-- 57
SG +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 58 -RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L + NTG + + NTG + + NT G A
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGSVNTGSVNTGGFNA 807
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 8/95 (8%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +GL N + +G N +G G+ N NTG N NTG + NTG
Sbjct: 1193 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1252
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG NTGG N NTG L + N NTG
Sbjct: 1253 SFNTGSF-----NTGGFNPGNTNTGYLNIGNYNTG 1282
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1996 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2055
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2056 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2098
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1976 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2035
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2036 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2073
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1185 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1244
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG NTGG N NTG L + N NT
Sbjct: 1245 NTGAFNPGSFNTGSF-----NTGGFNPGNTNTGYLNIGNYNT 1281
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2006 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2065
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2066 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2113
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2469 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2528
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2529 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2584
>gi|253797231|ref|YP_003030232.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|375294513|ref|YP_005098780.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392430723|ref|YP_006471767.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253318734|gb|ACT23337.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457018|gb|AEB02441.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392052132|gb|AFM47690.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3196
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2032 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2091
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2092 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2133
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + + NTG + + NTGG N NTG + NT
Sbjct: 779 SYNTGSVNTGSVNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNT 822
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
SG G+ N TG G+ N G G+ N + GL N NTG L + NTG +
Sbjct: 729 SGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTG 788
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 789 SVNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 837
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2412 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2471
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2472 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2509
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1185 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1244
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1245 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1286
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2968 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3027
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3028 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3069
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 2 SGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL-- 57
SG +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 58 -RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L + NTG + + NTG + + NT G A
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGSVNTGSVNTGGFNA 807
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1193 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1252
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1253 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1299
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 2001 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2060
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2061 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2103
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1981 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2040
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2041 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2078
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2011 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2070
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2071 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2118
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2474 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2533
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2534 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2589
>gi|289752336|ref|ZP_06511714.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289692923|gb|EFD60352.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 3181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3013 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3054
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2530
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|298523783|ref|ZP_07011192.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493577|gb|EFI28871.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 3178
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 289 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 348
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 349 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 394
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2019 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2078
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2079 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2120
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 716 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 775
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 776 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 824
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2399 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2458
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2459 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2496
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1172 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1231
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1232 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1273
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2950 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3009
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3010 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3051
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1180 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1239
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1240 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1286
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1988 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2047
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2048 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2090
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 40/83 (48%), Gaps = 8/83 (9%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 278 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 337
Query: 71 NTGGLGLRNCNTGGLGLRNCNTG 93
NTGG + NTG N NTG
Sbjct: 338 NTGGFNPGSYNTG-----NFNTG 355
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1968 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2027
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2028 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2065
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1998 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2057
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2058 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2105
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 688 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 747
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 748 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 794
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 296 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 355
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 356 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 392
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2461 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2520
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2521 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2571
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2468 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2527
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2528 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2586
>gi|440579757|emb|CCG10160.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 3176
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2012 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2071
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2072 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2113
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2392 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2451
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2452 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2489
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1165 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1224
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1225 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1266
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2948 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3007
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3008 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3049
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1173 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1232
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1233 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1279
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1981 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2040
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2041 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2083
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1961 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2020
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2021 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2058
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1991 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2050
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2051 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2098
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2454 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2513
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2514 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2569
>gi|15839689|ref|NP_334726.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|254363274|ref|ZP_04979320.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|385989814|ref|YP_005908112.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|422811229|ref|ZP_16859633.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|13879812|gb|AAK44540.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|134148788|gb|EBA40833.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|323721292|gb|EGB30348.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|339297007|gb|AEJ49117.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|379026423|dbj|BAL64156.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 3186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2958 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3017
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3018 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3059
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2579
>gi|306779146|ref|ZP_07417483.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306787301|ref|ZP_07425623.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308327856|gb|EFP16707.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308336013|gb|EFP24864.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 3186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2958 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3017
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3018 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3059
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N +G +G N TG +G+ N TG GL N NTG + N
Sbjct: 2969 IGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGSTNTGVFNPGDLN 3028
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NTGG + NTG L + NTG + +TG
Sbjct: 3029 TGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTGVANAGDVDTGAF 3072
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2579
>gi|294995062|ref|ZP_06800753.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|424806783|ref|ZP_18232214.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326906059|gb|EGE52992.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 3181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3013 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3054
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2530
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|289748075|ref|ZP_06507453.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289688603|gb|EFD56091.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGNGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3013 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3054
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGNGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGNGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGNGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2530
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|306809351|ref|ZP_07446019.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308344353|gb|EFP33204.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 3145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2684 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2743
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2744 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2674 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2733
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2734 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2775
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2641 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2700
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2701 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2740
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 880 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 939
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 940 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 988
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1543
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 1459 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNSGT 1515
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 1516 GNWGLFNSGSFNTGIGNSGTGSTGLFNAGSFNTGLANA 1553
>gi|148821501|ref|YP_001286255.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148720028|gb|ABR04653.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 3166
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2002 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2061
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2062 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2103
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 2382 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 2441
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2442 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2479
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2938 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2997
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 2998 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3039
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1971 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2030
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2031 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2073
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1951 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2010
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2011 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2048
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1981 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2040
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2041 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2088
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 46/116 (39%), Gaps = 18/116 (15%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------- 50
+GL N G +G N TG +G+ N T G+ N + GL N
Sbjct: 2444 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2503
Query: 51 ----NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + S NTG + NTG L + NTG + NTG + NT
Sbjct: 2504 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2559
>gi|289441685|ref|ZP_06431429.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289414604|gb|EFD11844.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 3181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3013 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3054
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG + S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIEFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2530
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|289748788|ref|ZP_06508166.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289689375|gb|EFD56804.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 3181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 2022 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 2081
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 2082 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 2123
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2953 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 3012
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 3013 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 3054
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG + S N+G
Sbjct: 2402 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIEFGSFNSGS 2461
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 2462 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 2499
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1991 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 2050
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 2051 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 2093
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1971 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 2030
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 2031 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 2068
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G+ N + GL N NTG L + NTG + + NT G A
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNA 797
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 2001 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 2060
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 2061 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 2108
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 2464 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 2523
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 2524 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 2574
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 2471 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 2530
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 2531 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 2589
>gi|148824553|ref|YP_001289307.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148723080|gb|ABR07705.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 2472
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 822 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 881
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 882 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 925
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 832 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 891
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 892 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 950
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 814 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 873
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 874 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 918
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 1416 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 1475
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 1476 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 1524
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1408 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 1465
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 1466 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 1509
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1365 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 1424
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1425 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1464
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 1398 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 1457
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 1458 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 1499
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2011 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2070
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2071 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2126
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 804 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 863
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 864 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 898
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2001 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2060
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2061 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2102
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 1968 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2027
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2028 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2067
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 207 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 266
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 267 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 315
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 771 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 830
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 831 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 870
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 786 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 842
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 843 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 880
>gi|422814582|ref|ZP_16862806.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323717995|gb|EGB27180.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 3111
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1452 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1511
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1512 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1555
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 258 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 317
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 318 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 366
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1462 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1521
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1522 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1580
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1444 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1503
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1504 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1548
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2046 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2105
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2106 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2154
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2038 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2095
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2096 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2139
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 207 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 266
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 267 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 306
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1995 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2054
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2055 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2094
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2028 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2087
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2088 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2129
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2641 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2700
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2701 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2756
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1434 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1493
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1494 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1528
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 227 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 286
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 287 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 341
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2631 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2690
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2691 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2732
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2598 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2657
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2658 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2697
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 216 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 275
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 276 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 306
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 199 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 257
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 258 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 299
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 837 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 896
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 897 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 945
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N TG GL N NTG +
Sbjct: 2056 TGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVG 2115
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG S NTG N NTG N +TG L N + G L N GL ++
Sbjct: 2116 DTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG--ILWRGNYEGLFSY 2173
Query: 109 T 109
+
Sbjct: 2174 S 2174
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1401 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1460
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1461 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1500
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 1416 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 1472
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 1473 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 1510
>gi|306786230|ref|ZP_07424552.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308329160|gb|EFP18011.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 3145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2089 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2148
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2149 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2197
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2081 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2138
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2139 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2182
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2038 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2097
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2098 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2137
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2071 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2130
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2131 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2172
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2684 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2743
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2744 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2674 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2733
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2734 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2775
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2641 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2700
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2701 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2740
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 880 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 939
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 940 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 988
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1543
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 1459 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 1515
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 1516 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 1553
>gi|148663209|ref|YP_001284732.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148507361|gb|ABQ75170.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 3145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2089 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2148
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2149 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2197
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2081 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2138
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2139 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2182
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2038 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2097
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2098 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2137
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2071 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2130
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2131 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2172
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2684 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2743
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2744 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2674 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2733
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2734 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2775
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2641 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2700
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2701 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2740
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 880 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 939
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 940 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 988
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1543
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 1459 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 1515
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 1516 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 1553
>gi|306969456|ref|ZP_07482117.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308353011|gb|EFP41862.1| PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 3145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2684 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2743
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2744 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2674 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2733
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2734 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2775
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2641 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2700
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2701 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2740
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 880 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 939
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 940 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 988
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1543
>gi|253800392|ref|YP_003033393.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297636006|ref|ZP_06953786.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297733004|ref|ZP_06962122.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313660336|ref|ZP_07817216.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|375297620|ref|YP_005101887.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|386000141|ref|YP_005918440.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392433831|ref|YP_006474875.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253321895|gb|ACT26498.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460125|gb|AEB05548.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344221188|gb|AEN01819.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392055240|gb|AFM50798.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3157
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1610
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1517 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1576
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1577 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1635
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2101 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2160
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2161 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2209
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2093 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2150
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2151 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2194
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2050 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2109
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2110 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2083 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2142
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2143 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2184
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2696 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2755
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2756 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2686 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2745
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2746 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2787
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2653 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2712
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2713 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2752
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 892 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 951
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 952 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 1000
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
>gi|298526827|ref|ZP_07014236.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|424805913|ref|ZP_18231344.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|298496621|gb|EFI31915.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|326905189|gb|EGE52122.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 3157
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1610
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1517 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1576
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1577 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1635
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2101 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2160
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2161 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2209
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2093 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2150
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2151 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2194
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2050 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2109
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2110 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2083 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2142
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2143 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2184
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2696 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2755
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2756 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2686 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2745
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2746 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2787
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2653 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2712
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2713 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2752
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 1471 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 1527
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 1528 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 1565
>gi|57117095|ref|YP_177963.1| PPE family protein PPE55 [Mycobacterium tuberculosis H37Rv]
gi|397675294|ref|YP_006516829.1| hypothetical protein RVBD_3347c [Mycobacterium tuberculosis H37Rv]
gi|7478724|pir||B70969 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|395140199|gb|AFN51358.1| hypothetical protein RVBD_3347c [Mycobacterium tuberculosis H37Rv]
gi|444896902|emb|CCP46168.1| PPE family protein PPE55 [Mycobacterium tuberculosis H37Rv]
Length = 3157
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1610
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1517 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1576
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1577 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1635
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2101 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2160
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2161 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2209
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2093 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2150
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2151 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2194
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2050 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2109
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2110 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2083 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2142
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2143 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2184
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2696 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2755
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2756 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2686 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2745
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2746 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2787
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2653 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2712
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2713 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2752
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 892 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 951
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 952 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 1000
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
>gi|385992588|ref|YP_005910886.1| ppe family protein [Mycobacterium tuberculosis CCDC5180]
gi|339299781|gb|AEJ51891.1| ppe family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2089 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2148
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2149 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2197
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2081 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2138
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2139 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2182
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2038 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2097
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2098 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2137
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2071 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2130
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2131 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2172
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2684 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2743
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2744 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2799
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2674 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2733
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2734 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2775
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2641 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2700
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2701 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2740
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 872 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 929
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 930 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 974
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1543
>gi|289571579|ref|ZP_06451806.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289545333|gb|EFD48981.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 1703
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 53 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 112
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 113 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 156
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 63 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 122
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 123 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 181
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 45 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 104
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 105 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 149
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N TG
Sbjct: 647 AGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 706
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 707 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 755
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 639 GIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 696
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 697 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 740
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 1242 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 1301
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 1302 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1357
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 35 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 94
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 95 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 129
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G LGL +
Sbjct: 596 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 655
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 656 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 695
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N G +G N TG GL N + G+ + TG
Sbjct: 629 GIGLTGDNQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTG 688
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 689 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 730
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 1232 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 1291
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 1292 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 1333
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 1199 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 1258
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 1259 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 1298
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 2 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 61
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 62 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 101
>gi|289576077|ref|ZP_06456304.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289540508|gb|EFD45086.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 2073
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1543
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +G N T G+GL N G G N G LGL N TG +G + T
Sbjct: 1456 VGFGNMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 1515
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 1516 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 1553
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 872 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 929
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 930 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 974
>gi|440582839|emb|CCG13242.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 3157
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1610
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G +GL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 2101 AGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 2160
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2161 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2209
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1517 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1576
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1577 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1635
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 2093 GIGGLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 2152
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTGG + NTG N NT
Sbjct: 2153 NTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2194
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2083 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2142
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + GL N NTG + + NTGG + NT
Sbjct: 2143 STGLFNAGSFNTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2184
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2696 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2755
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG + N NT L+
Sbjct: 2756 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVVNAGNVNTGALI 2811
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2050 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2109
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2110 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2149
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N G +G N T G+GL N G+G N G +GL N TG +G + T
Sbjct: 2062 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNTGT 2121
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 2122 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 2159
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G+G N G +GL N TG +G N TG GL + + G+ N TG
Sbjct: 2083 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2142
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG + + NT G
Sbjct: 2143 STGLFNAGSFNTGLANAGSYNTGSFNVGDTNTGGF 2177
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2686 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2745
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2746 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2787
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2653 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2712
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2713 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2752
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 892 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 951
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 952 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 1000
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 43/107 (40%), Gaps = 23/107 (21%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN------------------CNTGGL--GLRNC- 40
+G +GL N TG +G N T GL N N GG G+ N
Sbjct: 2704 TGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGVANAG 2763
Query: 41 --NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
NTG + NTGG S NTG N NTG + N NTG L
Sbjct: 2764 SYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVVNAGNVNTGAL 2810
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
>gi|31791484|ref|NP_853977.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|289572892|ref|ZP_06453119.1| PE family protein [Mycobacterium tuberculosis K85]
gi|31617070|emb|CAD93177.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|289537323|gb|EFD41901.1| PE family protein [Mycobacterium tuberculosis K85]
Length = 1985
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|289756370|ref|ZP_06515748.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T85]
gi|289711934|gb|EFD75946.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T85]
Length = 963
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|307086117|ref|ZP_07495230.1| hypothetical protein TMLG_04106 [Mycobacterium tuberculosis SUMu012]
gi|308364416|gb|EFP53267.1| hypothetical protein TMLG_04106 [Mycobacterium tuberculosis SUMu012]
Length = 3064
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1414 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1473
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1474 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1517
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 220 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 279
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 280 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 328
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1424 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1483
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1484 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1542
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1406 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1465
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1466 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1510
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2008 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2067
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2068 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2116
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2000 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2057
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2058 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2101
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 169 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 228
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 229 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 268
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1957 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2016
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2017 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2056
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 1990 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2049
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2050 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2091
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2603 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2662
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2663 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2718
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1396 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1455
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1456 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1490
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 189 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 248
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 249 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 303
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2593 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2652
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2653 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2694
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2560 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2619
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2620 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2659
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 178 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 237
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 238 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 268
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 161 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 219
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 220 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 261
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 799 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 858
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 859 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 907
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1363 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1422
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1423 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1462
>gi|385993408|ref|YP_005911706.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339293362|gb|AEJ45473.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 1735
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1175 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1234
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1235 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1276
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1183 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1242
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1243 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1289
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|308377315|ref|ZP_07668484.1| hypothetical protein TMHG_03869 [Mycobacterium tuberculosis SUMu008]
gi|308348287|gb|EFP37138.1| hypothetical protein TMHG_03869 [Mycobacterium tuberculosis SUMu008]
Length = 1645
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1414 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1473
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1474 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1517
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 220 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 279
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 280 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 328
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1424 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1483
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1484 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1542
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1406 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1465
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1466 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1510
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 169 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 228
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 229 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 268
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1396 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1455
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1456 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1490
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 189 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 248
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 249 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 303
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 178 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 237
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 238 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 268
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 161 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 219
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 220 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 261
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 799 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 858
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 859 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 907
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1363 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1422
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1423 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1462
>gi|308232427|ref|ZP_07664079.1| hypothetical protein TMAG_03292 [Mycobacterium tuberculosis
SUMu001]
gi|308213985|gb|EFO73384.1| hypothetical protein TMAG_03292 [Mycobacterium tuberculosis
SUMu001]
Length = 1814
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 301 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 361 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 404
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 311 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 370
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 371 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 429
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 293 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 352
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 353 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 397
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 895 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 954
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 955 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 1003
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 887 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 944
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 945 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 988
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 844 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 903
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 904 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 943
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 877 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 936
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 937 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 978
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 1490 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 1549
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 1550 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1605
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 283 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 342
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 343 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 377
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 1480 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 1539
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 1540 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 1581
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 1447 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 1506
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 1507 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 1546
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N TG GL N NTG +
Sbjct: 905 TGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVG 964
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG S NTG N NTG N +TG L N + G L N GL ++
Sbjct: 965 DTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG--ILWRGNYEGLFSY 1022
Query: 109 T 109
+
Sbjct: 1023 S 1023
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 250 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 310 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 349
>gi|306790598|ref|ZP_07428920.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308332993|gb|EFP21844.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 3082
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1432 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1491
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1492 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1535
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 238 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 297
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 298 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 346
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1442 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1501
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1502 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1560
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1424 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1483
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1484 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1528
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2026 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2085
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2086 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2134
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2018 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2075
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2076 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2119
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 187 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 246
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 247 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 286
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1975 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2034
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2035 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2074
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2008 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2067
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2068 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2109
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2621 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2680
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2681 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2736
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1414 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1473
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1474 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1508
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 207 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 266
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 267 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 321
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2611 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2670
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2671 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2712
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2578 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2637
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2638 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2677
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 196 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 255
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 256 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 286
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 179 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 237
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 238 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 279
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 817 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 876
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 877 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 925
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1381 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1440
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1441 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1480
>gi|379029706|dbj|BAL67439.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 3145
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1495 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1554
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1555 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1598
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G +GL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 2089 AGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 2148
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2149 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2197
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1505 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1564
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1565 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1623
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1487 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1546
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1547 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1591
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 2081 GIGGLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 2140
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTGG + NTG N NT
Sbjct: 2141 NTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2182
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2071 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2130
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + GL N NTG + + NTGG + NT
Sbjct: 2131 STGLFNAGSFNTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2172
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 51/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2684 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2743
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG + N NT L+
Sbjct: 2744 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVVNAGNVNTGALI 2799
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2038 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2097
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2098 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2137
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N G +G N T G+GL N G+G N G +GL N TG +G + T
Sbjct: 2050 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNTGT 2109
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 2110 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 2147
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1477 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1536
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1537 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1571
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G+G N G +GL N TG +G N TG GL + + G+ N TG
Sbjct: 2071 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2130
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG + + NT G
Sbjct: 2131 STGLFNAGSFNTGLANAGSYNTGSFNVGDTNTGGF 2165
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2674 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2733
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2734 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2775
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2641 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2700
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2701 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2740
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 880 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 939
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 940 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 988
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1444 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1503
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1504 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1543
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 43/107 (40%), Gaps = 23/107 (21%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN------------------CNTGGL--GLRNC- 40
+G +GL N TG +G N T GL N N GG G+ N
Sbjct: 2692 TGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGVANAG 2751
Query: 41 --NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
NTG + NTGG S NTG N NTG + N NTG L
Sbjct: 2752 SYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVVNAGNVNTGAL 2798
>gi|308374849|ref|ZP_07437620.2| hypothetical protein TMFG_02918 [Mycobacterium tuberculosis SUMu006]
gi|308340482|gb|EFP29333.1| hypothetical protein TMFG_02918 [Mycobacterium tuberculosis SUMu006]
Length = 3053
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1403 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1462
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1463 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1506
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 209 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 268
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 269 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 317
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1413 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1472
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1473 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1531
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1395 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1454
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1455 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1499
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 1997 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2056
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2057 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2105
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1989 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2046
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2047 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2090
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 158 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 217
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 218 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 257
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1946 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2005
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2006 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2045
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 1979 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2038
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2039 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2080
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2592 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2651
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2652 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2707
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1385 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1444
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1445 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1479
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 178 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 237
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 238 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 292
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2582 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2641
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2642 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2683
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2549 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2608
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2609 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2648
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 167 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 226
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 227 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 257
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 150 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 208
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 209 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 250
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 788 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 847
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 848 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 896
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1352 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1411
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1412 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1451
>gi|306782411|ref|ZP_07420748.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308324928|gb|EFP13779.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 3061
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1411 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1470
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1471 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1514
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 217 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 276
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 277 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 325
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1421 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1480
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1481 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1539
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1403 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1462
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1463 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1507
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2005 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2064
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2065 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2113
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1997 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2054
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2055 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2098
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 166 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 225
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 226 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 265
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1954 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2013
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2014 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2053
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 1987 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2046
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2047 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2088
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2600 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2659
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2660 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2715
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1393 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1452
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1453 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1487
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 186 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 245
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 246 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 300
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2590 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2649
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2650 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2691
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2557 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2616
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2617 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2656
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 175 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 234
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 235 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 265
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 158 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 216
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 217 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 258
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 796 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 855
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 856 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 904
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1360 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1419
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1420 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1459
>gi|339630379|ref|YP_004722021.1| PPE family protein, partial [Mycobacterium africanum GM041182]
gi|339329735|emb|CCC25379.1| PPE family protein, partial [Mycobacterium africanum GM041182]
Length = 964
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|385996220|ref|YP_005914518.1| ppe family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296174|gb|AEJ48285.1| ppe family protein [Mycobacterium tuberculosis CCDC5079]
Length = 2730
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1080 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1140 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1183
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1090 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1149
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1150 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1208
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1072 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1131
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1132 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1176
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 1674 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 1733
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 1734 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 1782
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G G N G LGL N TG +G N TG GL N + G+ + TG
Sbjct: 1062 GIGPTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1121
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + GL N NTG L N NTGG N NT
Sbjct: 1122 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNT 1163
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 1666 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 1723
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 1724 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 1767
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1623 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 1682
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1683 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1722
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 1656 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 1715
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 1716 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 1757
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2269 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2328
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2329 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2384
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2259 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2318
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2319 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2360
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2226 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2285
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2286 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2325
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+G N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1062 GIGPTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1121
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1122 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1156
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 457 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 514
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 515 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 559
>gi|308231518|ref|ZP_07663878.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308216994|gb|EFO76393.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 906
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|289759496|ref|ZP_06518874.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715060|gb|EFD79072.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1841
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1360 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1419
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1420 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1463
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 166 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 225
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 226 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 274
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1370 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1429
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1430 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1488
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1352 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1411
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1412 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1456
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 115 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 174
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 175 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 214
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1342 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1401
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1402 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1436
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 135 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 194
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 195 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 249
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 124 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 183
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 184 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 214
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 107 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 165
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 166 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 207
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 737 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 794
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 795 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 839
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1309 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1368
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1369 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1408
>gi|289747166|ref|ZP_06506544.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687694|gb|EFD55182.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3157
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1507 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1566
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1567 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1610
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1517 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1576
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1577 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1635
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1499 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1558
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1559 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1603
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2101 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2160
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2161 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2209
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2093 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2150
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2151 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2194
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 2050 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2109
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2110 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2149
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2083 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2142
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2143 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2184
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2696 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGNYNTGIGNSGVASTGLVNAGGF 2755
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2756 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2811
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1489 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1548
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1549 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1583
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N G+ +
Sbjct: 2686 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGNYNTGIGNSGVA 2745
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2746 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2787
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2653 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2712
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N G+ N GL N
Sbjct: 2713 GTGNIGFFNSGTANFGLFNSGNYNTGIGNSGVASTGLVNA 2752
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1456 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1515
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1516 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1555
>gi|307081514|ref|ZP_07490684.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308360801|gb|EFP49652.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 3102
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1452 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1511
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1512 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1555
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 258 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 317
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 318 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 366
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1462 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1521
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1522 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1580
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1444 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1503
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1504 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1548
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2046 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2105
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2106 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2154
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2038 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2095
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2096 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2139
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 207 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 266
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 267 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 306
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1995 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2054
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2055 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2094
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2028 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2087
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2088 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2129
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2641 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2700
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2701 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2756
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1434 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1493
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1494 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1528
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 227 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 286
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 287 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 341
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2631 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2690
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2691 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2732
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2598 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2657
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2658 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2697
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 216 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 275
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 276 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 306
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 199 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 257
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 258 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 299
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 837 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 896
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 897 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 945
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1401 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1460
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1461 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1500
>gi|289445845|ref|ZP_06435589.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418803|gb|EFD16004.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 982
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 827
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 691 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 750
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 751 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|289752048|ref|ZP_06511426.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692635|gb|EFD60064.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1183
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 680 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 739
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 740 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 783
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 690 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 749
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 750 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 808
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 672 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 731
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 732 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 776
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 662 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 721
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 722 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 756
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 57 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 114
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 115 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 159
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 629 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 688
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 689 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 728
>gi|306795127|ref|ZP_07433429.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu005]
gi|308336610|gb|EFP25461.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 3090
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 1440 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 1499
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 1500 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 1543
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 246 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 305
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 306 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 354
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 1450 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 1509
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 1510 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 1568
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 1432 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 1491
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 1492 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 1536
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 2034 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 2093
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 2094 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 2142
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2026 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 2083
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 2084 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 2127
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 195 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 254
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 255 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 294
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 1983 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 2042
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2043 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 2082
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 2016 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 2075
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 2076 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 2117
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 2629 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 2688
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 2689 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 2744
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 1422 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 1481
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 1482 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 1516
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 215 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 274
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 275 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 329
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 2619 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 2678
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 2679 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 2720
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 2586 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 2645
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 2646 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 2685
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 204 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 263
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 264 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 294
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 187 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 245
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 246 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 287
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 825 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 884
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 885 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 933
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 1389 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 1448
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1449 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 1488
>gi|289444998|ref|ZP_06434742.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417917|gb|EFD15157.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 2023
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 373 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 432
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L N NTGG N NTG + NTGG N NT
Sbjct: 433 SYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNT 476
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G N TG GL N + G+ N TG GL N + GL N NTG L
Sbjct: 383 TGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAG 442
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNCNTRGLVAFT 109
+ NTGG N NTG + NTGG N NTG L + GLV F+
Sbjct: 443 NTNTGGFNPGNVNTGWFNAGHTNTGGFNTGNVNTGAFNSGSFNNGALWTGDHHGLVGFS 501
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 365 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 424
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL N NTG L N NTGG N NTG + NT G
Sbjct: 425 NTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNTGGF 469
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N TG
Sbjct: 967 AGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 1026
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 1027 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 1075
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 959 GIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 1016
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 1017 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 1060
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 1562 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 1621
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 1622 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1677
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 355 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 414
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG L N NT G
Sbjct: 415 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGF 449
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G LGL +
Sbjct: 916 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 975
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 976 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 1015
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N G +G N TG GL N + G+ + TG
Sbjct: 949 GIGLTGDNQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTG 1008
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 1009 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 1050
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 1552 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 1611
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 1612 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 1653
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 1519 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 1578
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 1579 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 1618
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N TG GL N NTG +
Sbjct: 977 AGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVG 1036
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG S NTG N NTG N +TG L N + G L N GL ++
Sbjct: 1037 DTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG--ILWRGNYEGLFSY 1094
Query: 109 T 109
+
Sbjct: 1095 S 1095
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 322 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 381
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 382 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 421
>gi|57116720|ref|YP_177715.1| PPE family protein PPE6 [Mycobacterium tuberculosis H37Rv]
gi|148660071|ref|YP_001281594.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|167967606|ref|ZP_02549883.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397672096|ref|YP_006513631.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|7478716|pir||B70524 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|148504223|gb|ABQ72032.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395137001|gb|AFN48160.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444893781|emb|CCP43035.1| PPE family protein PPE6 [Mycobacterium tuberculosis H37Rv]
Length = 963
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
S +GL N +G +GL N TG G+ N TG GL N NTG + NTGG
Sbjct: 289 SHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPG 348
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTG N NTG + NTG N NT +A
Sbjct: 349 SYNTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 2 SGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR- 58
SG +G + N+G +GL N G +GL N +G G+ N TG G+ N G G+
Sbjct: 697 SGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGN 756
Query: 59 --SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG L + NTG + + NTGG N NT
Sbjct: 757 AGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 802
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 48/105 (45%), Gaps = 8/105 (7%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 719 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 778
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
S NTG + + NTGG N NTG NTG L R+ R
Sbjct: 779 SYNTGSVNTGSVNTGGFNAGNYNTGYF-----NTGDLQHRHGEHR 818
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
S +GL N G +GL N +G G+ N TG G+ N G G+ N NTG
Sbjct: 709 SHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSG 768
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
NTG L + NTG + + NTGG N NTG
Sbjct: 769 DLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNTGYF 805
>gi|289568217|ref|ZP_06448444.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289541970|gb|EFD45619.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 704
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+GL N +G +GL N TG G+ N TG GL N NTG + NTGG S N
Sbjct: 292 IGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYN 351
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG N NTG N NTG + NTG N NT +A
Sbjct: 352 TGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 397
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RSCNTGGLGLRNC 70
G G N + +GL N +G +GL N TG G+ N TG GL S NTG +
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG + NTG N NTG N NT
Sbjct: 341 NTGGFNPGSYNTGNFNTGNYNTGSFNAGNYNT 372
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 40/97 (41%), Gaps = 13/97 (13%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLR 48
SG +GL N TG G+ N TG GL N NTGG + NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGGFNPGSYNTGNFNTG 358
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
N NTG + NTG + NTG N NTG
Sbjct: 359 NYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAF 395
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 5/85 (5%)
Query: 23 GGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN---CNTGGLGL 77
G +G + N+G +GL N +G +GL N TG G+ + TG GL N NTG
Sbjct: 278 GQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNT 337
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTGG + NTG N NT
Sbjct: 338 GDVNTGGFNPGSYNTGNFNTGNYNT 362
>gi|443687204|gb|ELT90254.1| hypothetical protein CAPTEDRAFT_191466 [Capitella teleta]
Length = 228
Score = 48.5 bits (114), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 43/102 (42%), Gaps = 2/102 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
SG +G+ CN G + CN G + CN G + CN G + CN G + C
Sbjct: 7 SGPIGM--CNKRTQGYQMCNKRTQGYQMCNKRTQGYQMCNKRTQGYQMCNKRTQGYQMCK 64
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G + CN G + CN G + CN G + CN R
Sbjct: 65 KRTQGYQMCNKRTQGYQMCNKRTQGYQMCNKRTQGYQMCNKR 106
>gi|209165355|gb|ACI41239.1| aggregate spider glue 2 [Nephila clavipes]
Length = 714
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+
Sbjct: 550 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVS----- 604
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GLG+ + GLG+ + GLG+ + GLG+ + GL
Sbjct: 605 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGL 646
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 540 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVS 599
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GLG+ GLG+ + GLG+ + GLG+ + GL
Sbjct: 600 GLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGL 636
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ GLG+ +
Sbjct: 560 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVS-----GLGVSGSSVS 614
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GLG+ + GLG+ + GLG+ + GLG+ + GL
Sbjct: 615 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGL 656
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GLG+ + GLG+ + GLG+ + GLG+ GLG+ + GLG+ +
Sbjct: 570 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVS-----GLGVSGSSVSGLGVSGSSVS 624
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GLG+ + GLG+ + GLG+ + GLG+ + +
Sbjct: 625 GLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSDK 664
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCN 71
GLG+ + GLG+ + GLG+ + GLG+ + GLG+ + GLG+ +
Sbjct: 538 VSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSSVSGLGVSGSS 597
Query: 72 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GLG+ GLG+ + GLG+ + GL
Sbjct: 598 VSGLGVS-----GLGVSGSSVSGLGVSGSSVSGL 626
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GLG+ + GLG+ + GLG+ GLG+ + GLG+ + GLG+ +
Sbjct: 580 GLGVSGSSVSGLGVSGSSVSGLGVS-----GLGVSGSSVSGLGVSGSSVSGLGVSGSSVS 634
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGLRNCNTRGLVA 107
GLG+ + GLG+ + GLG+ + + L + GLVA
Sbjct: 635 GLGVSGSSVSGLGVSGSSVSGLGVSGSSDKPNKELLSILMEGLVA 679
>gi|307172999|gb|EFN64141.1| hypothetical protein EAG_08242 [Camponotus floridanus]
Length = 113
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 43/104 (41%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
L NCN L NCN L NCN L NCN L NCN L +CN
Sbjct: 3 FLASNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYL 62
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
L NCN L NCN L NCN L NCN LV+
Sbjct: 63 FLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVS 106
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 39/94 (41%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
NCN L NCN L NCN L NCN L NCN L +CN L
Sbjct: 18 NCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNYLFLVSN 77
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NCN L NCN L NCN L NCN
Sbjct: 78 NCNYLFLVSNNCNYLFLVSNNCNYLFLVSNNCNY 111
>gi|289449043|ref|ZP_06438787.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422001|gb|EFD19202.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 2169
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G+ N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGVLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G+ N TG LGL N TG +G N TG G+ +
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGVLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 61 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGL 105
+ G+ N T GL N NTG + + NTG N NT G
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGF 389
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G+ N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGVLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G+ +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGVLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 2076 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2135
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRG 104
GL N + GL N NTG L N NT G
Sbjct: 2136 STGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGG 2169
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 2094 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 2153
Query: 59 SCNTGGLGLRNCNTGG 74
S NTG L N NTGG
Sbjct: 2154 SYNTGSLNAGNTNTGG 2169
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 2086 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 2145
Query: 64 GLGLRNC---NTGGLGLRNCNTGG 84
GL N NTG L N NTGG
Sbjct: 2146 NTGLANAGSYNTGSLNAGNTNTGG 2169
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 2043 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 2102
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2103 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2142
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 1471 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 1528
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 1529 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 1573
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 47/105 (44%), Gaps = 10/105 (9%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
SG G N G N GLGL G +GL N + GL N G +G N
Sbjct: 235 SGNFGFGNIGNANFGFGNS---GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGF--AN 288
Query: 62 TG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG G+GL N G+G+ N TG LGL N TG +G N T
Sbjct: 289 TGSNNIGIGLTGDNLTGIGVLNSGTGNLGLFNSGTGNIGFFNSGT 333
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +G N T G+GL N G G N G LGL N TG +G + T
Sbjct: 2055 VGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 2114
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 2115 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 2152
>gi|289755477|ref|ZP_06514855.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289696064|gb|EFD63493.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length = 2079
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 1471 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 1528
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 1529 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 1573
>gi|289444997|ref|ZP_06434741.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T46]
gi|289417916|gb|EFD15156.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T46]
Length = 780
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 341
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 396
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
>gi|308232428|ref|ZP_07664080.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308213986|gb|EFO73385.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 1213
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +GL N TG GL N + G+ N TG GL N NTG
Sbjct: 880 AGNIGLFNSGTGNVGLFNSGTGNFGLFNSGSFNTGIGNGGTGSTGLFNAGNFNTGVANPG 939
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 940 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGVANSGNVDTGALMS 988
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGT 341
>gi|82596385|ref|XP_726240.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481565|gb|EAA17805.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 549
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 35/99 (35%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G R C+ G R C+ G R C+ G R C+ R C+ R C+
Sbjct: 194 GYTYKRECDNGYTYKRECDNGYTYKRECDNGYTYKRECDNDYTYKRECDNDYTYKRECDN 253
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R C+ R C+ R C+ R C+
Sbjct: 254 GYTYKRECDNDYTYKRECDNDYTYKRECDNDYTYKRECD 292
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 34/99 (34%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G R C+ G R C+ G R C+ R C+ R C+ G R C+
Sbjct: 204 GYTYKRECDNGYTYKRECDNGYTYKRECDNDYTYKRECDNDYTYKRECDNGYTYKRECDN 263
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
R C+ R C+ R C+ R C+
Sbjct: 264 DYTYKRECDNDYTYKRECDNDYTYKRECDNDYTYKRECD 302
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 34/94 (36%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R + G R C+ G R C+ G R C+ G R C+ R C+
Sbjct: 189 REYDNGYTYKRECDNGYTYKRECDNGYTYKRECDNGYTYKRECDNDYTYKRECDNDYTYK 248
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
R C+ G R C+ R C+ R C+
Sbjct: 249 RECDNGYTYKRECDNDYTYKRECDNDYTYKRECD 282
>gi|148824554|ref|YP_001289308.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148723081|gb|ABR07706.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 647
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGT 341
>gi|289571581|ref|ZP_06451808.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T17]
gi|289545335|gb|EFD48983.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T17]
Length = 627
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
>gi|289752050|ref|ZP_06511428.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T92]
gi|289692637|gb|EFD60066.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
T92]
Length = 647
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 360
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTGG N NTG L N NTG N NT ++
Sbjct: 361 SYNTGSFNAGNTNTGGFNPGNVNTGWLNTGNTNTGIANSGNVNTGAFIS 409
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+
Sbjct: 270 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFNSGTGNFGVFNS 329
Query: 59 -SCNTG-------GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG GL N NTG + + NTG N NTGG N NT
Sbjct: 330 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGGFNPGNVNT 384
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 349
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 242 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 300
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 301 TGNLGLFNSGTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTA 342
>gi|302857690|ref|XP_002959935.1| hypothetical protein VOLCADRAFT_72041 [Volvox carteri f.
nagariensis]
gi|300253882|gb|EFJ39001.1| hypothetical protein VOLCADRAFT_72041 [Volvox carteri f.
nagariensis]
Length = 289
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 42/103 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L R C+ L C+ L R C+ L R C+ L
Sbjct: 170 RMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLA 229
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTG 110
R C+ L R C+ L R C+ L R C+ R + FT
Sbjct: 230 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRPVRFFTQ 272
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 42/100 (42%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L R C+ L C+ L R C+ L R C+ L
Sbjct: 50 RMCSPRSLLARMCSPRSLLARMCSPRSLLTCMCSPRSLLARMCSPRSLLARMCSPRSLLA 109
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 110 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 149
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
C+ L R C+ L R C+ L R C+ L C+ L R C+ L R
Sbjct: 162 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLARM 221
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 222 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 259
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
C+ L R C+ L R C+ L R C+ L C+ L R C+ L R
Sbjct: 42 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLTCMCSPRSLLARMCSPRSLLARM 101
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 102 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 139
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L R C+ L R C+ L R C+ L R C+ L
Sbjct: 90 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 149
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L C+ L R C+ L R C+ R L+A
Sbjct: 150 CMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLA 189
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L R C+ L R C+ L R C+ L C+ L
Sbjct: 100 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLA 159
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 160 CMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 199
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L C+ L R C+ L R C+ L R C+ L C+ L
Sbjct: 30 RMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLTCMCSPRSLLA 89
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 90 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 129
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L C+ L R C+ L R C+ L R C+ L
Sbjct: 60 RMCSPRSLLARMCSPRSLLTCMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 119
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L R C+ L R C+ L C+ R L+A
Sbjct: 120 RMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLA 159
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
C+ L R C+ L R C+ L R C+ L R C+ L R C+ L R
Sbjct: 82 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARM 141
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L C+ L C+ L R C+ R L+A
Sbjct: 142 CSPRSLLACMCSPRSLLACMCSPRSLLARMCSPRSLLA 179
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 40/98 (40%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
C+ L R C+ L C+ L R C+ L R C+ L R C+ L
Sbjct: 22 CSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLTCM 81
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 82 CSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 119
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L R C+ L R C+ L C+ L C+ L
Sbjct: 110 RMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLACMCSPRSLLA 169
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L R C+ L R C+ L C+ R L+A
Sbjct: 170 RMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLA 209
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L R C+ L C+ L C+ L R C+ L
Sbjct: 120 RMCSPRSLLARMCSPRSLLARMCSPRSLLACMCSPRSLLACMCSPRSLLARMCSPRSLLA 179
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L R C+ L C+ L R C+ R L+A
Sbjct: 180 RMCSPRSLLARMCSPRSLLACMCSPRSLLARMCSPRSLLA 219
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L R C+ L C+ L C+ L R C+ L R C+ L
Sbjct: 130 RMCSPRSLLARMCSPRSLLACMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLA 189
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L C+ L R C+ L R C+ R L+A
Sbjct: 190 RMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLA 229
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L C+ L C+ L R C+ L R C+ L R C+ L
Sbjct: 140 RMCSPRSLLACMCSPRSLLACMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 199
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
C+ L R C+ L R C+ L R C+ R L+A
Sbjct: 200 CMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 239
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 40/100 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R C+ L C+ L R C+ L R C+ L R C+ L R C+ L
Sbjct: 70 RMCSPRSLLTCMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLARMCSPRSLLA 129
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
R C+ L R C+ L C+ L C+ R L+A
Sbjct: 130 RMCSPRSLLARMCSPRSLLACMCSPRSLLACMCSPRSLLA 169
>gi|254422357|ref|ZP_05036075.1| Pentapeptide repeat protein [Synechococcus sp. PCC 7335]
gi|196189846|gb|EDX84810.1| Pentapeptide repeat protein [Synechococcus sp. PCC 7335]
Length = 346
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 7 LRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
LR+ + LRN N G LR+ N G L N L N N G+ L N
Sbjct: 180 LRHADLSHADLRNTYLVDANLSGTDLRHANLGNADLENAKLWDTNLSNANLRGINLEETN 239
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
LRN G LR + + LRN + G LRN N R
Sbjct: 240 -----LRNVKFIGADLRWADLSDVDLRNIDLRGADLRNANLR 276
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G LR+ N G L N L N N G+ L N LRN G LR +
Sbjct: 201 SGTDLRHANLGNADLENAKLWDTNLSNANLRGINLEETN-----LRNVKFIGADLRWADL 255
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ LRN + G LRN N LR N G + N +G
Sbjct: 256 SDVDLRNIDLRGADLRNANLRNADLRGANLEGSKVHGANLKG 297
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 41/104 (39%), Gaps = 10/104 (9%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
LR+ + LR+ + LRN N G LR+ N G L N L +
Sbjct: 169 KLRHADLSCANLRHADLSHADLRNTYLVDANLSGTDLRHANLGNADLENAKLWDTNLSNA 228
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
N G+ L N LRN G LR + + LRN + RG
Sbjct: 229 NLRGINLEETN-----LRNVKFIGADLRWADLSDVDLRNIDLRG 267
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
LR N L N N+ LR+ + LR+ + LRN L N G
Sbjct: 149 DLRRANLSQTNLSNANSSCAKLRHADLSCANLRHADLSHADLRNT-----YLVDANLSGT 203
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTG 110
LR+ N G L N L N N G+ L N R V F G
Sbjct: 204 DLRHANLGNADLENAKLWDTNLSNANLRGINLEETNLRN-VKFIG 247
>gi|289759502|ref|ZP_06518880.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715066|gb|EFD79078.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1308
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1107 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1166
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1167 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1214
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1099 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1158
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1159 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1200
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 520 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 579
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 580 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 614
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 512 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 571
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 572 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 613
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 1068 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1127
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1128 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1165
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 502 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 561
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 562 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 603
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 491 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 550
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 551 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 596
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N GL N G +GL N TG G+GL G+G N G LGL +
Sbjct: 1056 GNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNS 1115
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 1116 GAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 1155
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S G N +GL N TG G+GL N G+G N G +GL N TG +G +
Sbjct: 478 SANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFN 537
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG G+ N + G+ N TG GL N + G+ N
Sbjct: 538 SGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 578
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 472 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 531
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 532 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 568
>gi|390367593|ref|XP_001181887.2| PREDICTED: cleavage stimulation factor subunit 2-like
[Strongylocentrotus purpuratus]
Length = 618
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG+G N GG+G N G +G + N GG+G + GG+G + N G+G +
Sbjct: 296 GGMGQGEANRGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNRSGMGPGDMSR 355
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
GG+G + GG+G + N GG+G + N GG+G ++
Sbjct: 356 GGMGPGDMGRGGMGPGDMNRGGMGPGDMNRGGMGQQDT 393
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 52/99 (52%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG+G N GG+G N GG+G N G +G + N GG+G + GG+G N
Sbjct: 286 GGMGPGEMNRGGMGQGEANRGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNR 345
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G+G + + GG+G + GG+G + N GG+G + N
Sbjct: 346 SGMGPGDMSRGGMGPGDMGRGGMGPGDMNRGGMGPGDMN 384
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG+G N GG+G N GG+G N GG+G N G +G + N GG+G
Sbjct: 276 GGMGQGETNRGGMGPGEMNRGGMGQGEANRGGMGPGEGNRGNMGQSDMNRGGMGPGDMGR 335
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
GG+G + N G+G + + GG+G + GG+G + N
Sbjct: 336 GGMGPGDMNRSGMGPGDMSRGGMGPGDMGRGGMGPGDMN 374
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 9 NCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
N N GG+G N + GG+G N GG+G N GG+G N GG+G N G +G
Sbjct: 261 NMNRGGMGPGDNMSRGGMGQGETNRGGMGPGEMNRGGMGQGEANRGGMGPGEGNRGNMGQ 320
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
+ N GG+G + GG+G + N G+G
Sbjct: 321 SDMNRGGMGPGDMGRGGMGPGDMNRSGMG 349
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N + GG+G N GG+G N GG+G N GG+G N G +G N GG+G
Sbjct: 272 NMSRGGMGQGETNRGGMGPGEMNRGGMGQGEANRGGMGPGEGNRGNMGQSDMNRGGMGPG 331
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
+ GG+G + N G+G + + GG+G
Sbjct: 332 DMGRGGMGPGDMNRSGMGPGDMSRGGMG 359
>gi|383848847|ref|XP_003700059.1| PREDICTED: uncharacterized protein LOC100881003 [Megachile rotundata]
Length = 1820
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R N G G R G G + N G R N G G R G R N
Sbjct: 1044 DGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGPTENQFGPRGPN 1103
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
G G R NTG G R G GLR N G G R
Sbjct: 1104 NGPFGPRGPNTGQFGPR--FDGQFGLRRPNDGQFGPR 1138
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 38/105 (36%), Gaps = 2/105 (1%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G G R G G + N G R N G G R G R N G G R NT
Sbjct: 1055 GQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGPTENQFGPRGPNNGPFGPRGPNT 1114
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G R G GLR N G G R G LG + N R
Sbjct: 1115 GQFGPR--FDGQFGLRRPNDGQFGPRGPIDGQLGPQGPNNRPFTP 1157
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1036 PLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGPTEN 1095
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
G R N G G R NTG G R G GLR N
Sbjct: 1096 QFGPRGPNNGPFGPRGPNTGQFGPR--FDGQFGLRRPN 1131
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 30/82 (36%)
Query: 21 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNC 80
N LG R + G G R N G G R G G + N G R N G G R
Sbjct: 1033 NQYPLGPRGFSDGQFGPRGPNNGQFGPRGPTDGQFGPQGPNDTQFGPRGVNDGLFGPRGP 1092
Query: 81 NTGGLGLRNCNTGGLGLRNCNT 102
G R N G G R NT
Sbjct: 1093 TENQFGPRGPNNGPFGPRGPNT 1114
>gi|328788088|ref|XP_003251062.1| PREDICTED: hypothetical protein LOC100578597 [Apis mellifera]
Length = 1895
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R N G R + G G R+ N G G + N G G R N LGL+ N
Sbjct: 1102 DGQFGPRGSNNGQFAPRGPD-GQFGPRSGNDGIFGSKGSNDGLFGPRVDNQ--LGLKPPN 1158
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G R+ N G G R L LR N G GL+ N R V
Sbjct: 1159 NGQFGPRSSNIGQFGPRY--DSQLDLRRSNDGQFGLQGLNNRPFVP 1202
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 39/89 (43%), Gaps = 3/89 (3%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
N+ LG R + G G R N G R + G G R+ N G G + N G G R
Sbjct: 1090 PNSYPLGTRGSSDGQFGPRGSNNGQFAPRGPD-GQFGPRSGNDGIFGSKGSNDGLFGPRV 1148
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
N LGL+ N G G R+ N G G R
Sbjct: 1149 DNQ--LGLKPPNNGQFGPRSSNIGQFGPR 1175
>gi|298526831|ref|ZP_07014240.1| hypothetical protein TBAG_03710 [Mycobacterium tuberculosis
94_M4241A]
gi|298496625|gb|EFI31919.1| hypothetical protein TBAG_03710 [Mycobacterium tuberculosis
94_M4241A]
Length = 1684
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1231 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1290
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1291 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1338
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N +G GL N G +GL N TG G+GL G+G N TG LGL + T
Sbjct: 1 MGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGT 60
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N T GL N
Sbjct: 61 GNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNA 98
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 50 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 109
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 110 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 153
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 8 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 67
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 68 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 126
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1223 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1282
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1283 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1324
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
+GL N +G GL N G +GL N TG G+GL G+G + TG LGL N T
Sbjct: 1 MGLGNAGSGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGT 60
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G +G N TG GL N + G+ N T
Sbjct: 61 GNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 91
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 644 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 703
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 704 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 738
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 32 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 91
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 92 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 133
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 636 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 695
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 696 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 737
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 1192 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1251
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1252 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1289
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 626 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 685
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 686 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 727
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 60 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 119
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 120 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 177
Query: 109 T 109
+
Sbjct: 178 S 178
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 615 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 674
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 675 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 720
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 611 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 665
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 666 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 702
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 596 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 655
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 656 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 692
>gi|156381233|ref|XP_001632170.1| predicted protein [Nematostella vectensis]
gi|156219222|gb|EDO40107.1| predicted protein [Nematostella vectensis]
Length = 130
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 58/105 (55%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+S GL + + +GGL + + + GL + + + GL + + +GGL + + + GL +
Sbjct: 15 ISRGLTMNHVISGGLTMDHVISRGLTMDHVISRGLTMDHVISGGLTMDHVISRGLTMDHV 74
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ GL + + +GGL + + + GL + + +GGL + + +RGL
Sbjct: 75 ISRGLTMDHVISGGLTMDHVISRGLTMDHVISGGLTMDHVISRGL 119
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 54/100 (54%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+SGGL + + + GL + + + GL + + +GGL + + + GL + + + GL +
Sbjct: 25 ISGGLTMDHVISRGLTMDHVISRGLTMDHVISGGLTMDHVISRGLTMDHVISRGLTMDHV 84
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GGL + + + GL + + +GGL + + + GL + +
Sbjct: 85 ISGGLTMDHVISRGLTMDHVISGGLTMDHVISRGLTMDHL 124
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 53/100 (53%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+S GL + + + GL + + +GGL + + + GL + + + GL + + +GGL +
Sbjct: 5 ISRGLTMDHVISRGLTMNHVISGGLTMDHVISRGLTMDHVISRGLTMDHVISGGLTMDHV 64
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+ GL + + + GL + + +GGL + + + GL + +
Sbjct: 65 ISRGLTMDHVISRGLTMDHVISGGLTMDHVISRGLTMDHV 104
>gi|289449047|ref|ZP_06438791.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422005|gb|EFD19206.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 3536
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3083 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3142
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3143 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3190
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1902 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 1961
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 1962 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2005
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 134 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 193
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 194 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 242
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1303 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1362
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1363 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1397
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1860 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1919
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 1920 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 1978
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3075 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3134
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3135 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3176
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1252 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1311
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1312 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1351
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1295 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1354
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1355 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1399
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2496 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2555
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2556 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2590
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 126 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 185
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 186 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 227
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1884 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 1943
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 1944 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 1985
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1816 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1875
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1876 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 1930
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1272 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1331
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1332 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1386
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2488 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2547
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2548 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2589
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3044 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3103
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3104 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3141
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2478 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2537
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2538 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2579
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 1912 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 1971
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 1972 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2029
Query: 109 T 109
+
Sbjct: 2030 S 2030
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2467 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2526
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2527 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2572
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N GL N G +GL N TG G+GL G+G N G LGL +
Sbjct: 3032 GNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNS 3091
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 3092 GAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3131
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1252 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1311
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1312 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1343
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 637 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 696
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 697 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 744
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2463 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2517
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2518 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2554
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2448 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2507
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2508 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2544
>gi|449065463|ref|YP_007432546.1| PPE family protein [third part] [Mycobacterium bovis BCG str. Korea
1168P]
gi|449033971|gb|AGE69398.1| PPE family protein [third part] [Mycobacterium bovis BCG str. Korea
1168P]
Length = 1219
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 766 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 825
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 826 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 873
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 758 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 817
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 818 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 859
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 179 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 238
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 239 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 273
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 727 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 786
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 787 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 824
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 171 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 230
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 231 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 272
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 161 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 220
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 221 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 262
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 150 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 209
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 210 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 255
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N GL N G +GL N TG G+GL G+G N G LGL +
Sbjct: 715 GNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNS 774
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 775 GAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 814
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N G LGL N G +G N TG GL +
Sbjct: 735 GNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNS 794
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
+ G+ N TG GL N + G+ N NTG + + NT G
Sbjct: 795 GSFNTGVGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNVGDTNTGGF 842
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 146 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 200
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 201 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 237
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 131 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 190
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 191 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 227
>gi|422814584|ref|ZP_16862808.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323717991|gb|EGB27177.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 3702
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3249 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3308
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3309 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3356
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2068 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2127
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2128 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2171
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 300 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 360 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 408
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1469 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1528
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1529 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1563
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2026 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2085
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2086 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2144
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3241 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3300
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3301 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3342
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1418 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1477
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1478 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1517
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1461 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1520
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1521 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1565
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2662 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2721
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2722 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2756
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 292 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 351
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 352 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 393
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2050 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2109
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2110 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2151
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1982 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2041
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2042 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2096
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1438 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1497
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1498 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1552
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2654 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2713
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2714 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2755
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3210 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3269
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3270 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3307
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2644 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2703
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2704 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2745
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2078 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2137
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2138 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2195
Query: 109 T 109
+
Sbjct: 2196 S 2196
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2633 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2692
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2693 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2738
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1418 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1477
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1478 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1509
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 803 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 862
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 863 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 910
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2629 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2683
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2684 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2720
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2614 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2673
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2674 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2710
>gi|308370235|ref|ZP_07420752.2| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308324925|gb|EFP13776.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 3623
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3170 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3229
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3230 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3277
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1989 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2048
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2049 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2092
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 221 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 280
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 281 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 329
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1390 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1449
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1450 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1484
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1947 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2006
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2007 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2065
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3162 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3221
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3222 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3263
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1339 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1398
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1399 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1438
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1382 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1441
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1442 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1486
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2583 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2642
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2643 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2677
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 213 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 272
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 273 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 314
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1971 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2030
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2031 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2072
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1903 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1962
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1963 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2017
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1359 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1418
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1419 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1473
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2575 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2634
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2635 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2676
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3131 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3190
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3191 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3228
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2565 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2624
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2625 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2666
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 1999 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2058
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2059 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2116
Query: 109 T 109
+
Sbjct: 2117 S 2117
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2554 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2613
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2614 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2659
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N GL N G +GL N TG G+GL G+G N G LGL +
Sbjct: 3119 GNVGLGNAGGNNWGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNS 3178
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 3179 GAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNA 3218
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1339 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1398
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1399 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1430
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 724 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 783
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 784 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 831
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2550 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2604
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2605 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2641
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2535 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2594
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2595 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2631
>gi|306809355|ref|ZP_07446023.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu007]
gi|308344350|gb|EFP33201.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 3688
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3235 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3294
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3295 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3342
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2054 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2113
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2114 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2157
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 286 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 345
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 346 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 394
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1455 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1514
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1515 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1549
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2012 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2071
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2072 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2130
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3227 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3286
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3287 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3328
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1404 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1463
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1464 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1503
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1447 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1506
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1507 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1551
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2648 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2707
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2708 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2742
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 278 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 337
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 338 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 379
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2036 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2095
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2096 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2137
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1968 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2027
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2028 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2082
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1424 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1483
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1484 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1538
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2640 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2699
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2700 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2741
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3196 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3255
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3256 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3293
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2630 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2689
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2690 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2731
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2064 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2123
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2124 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2181
Query: 109 T 109
+
Sbjct: 2182 S 2182
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2619 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2678
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2679 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2724
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1404 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1463
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1464 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1495
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 789 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 848
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 849 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 896
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2615 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2669
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2670 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2706
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2600 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2659
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2660 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2696
>gi|289747170|ref|ZP_06506548.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687698|gb|EFD55186.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 1073
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 620 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 679
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 680 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 727
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 612 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 671
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 672 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 713
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 33 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 92
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 93 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 127
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 581 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 640
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 641 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 678
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 25 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 84
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 85 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 126
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 15 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 74
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 75 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 116
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 4 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 63
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 64 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 109
>gi|340628330|ref|YP_004746782.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006520|emb|CCC45704.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 3735
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVANVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG N NTG N NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGNTNTGDFNPGNVNTGWLNTGNTNTGVANSGNVNTGAFIS 421
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 2094 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 2153
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + N NTGG N NTG + NTG N NT
Sbjct: 2154 SYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNTGLFNTGNVNT 2197
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG LGL N TG +G N TG G+ N + G+ N T GL +
Sbjct: 305 GIGGLNSGTGNLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGF 364
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG N NTG N NTG L N NT
Sbjct: 365 NTGVANVGSYNTGSFNAGNTNTGDFNPGNVNTGWLNTGNTNT 406
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 2086 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 2145
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + N NTGG N NTG + NT
Sbjct: 2146 NTGLANAGSYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNT 2187
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 2688 AGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAG 2747
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG + NTG N NTG N +T L++
Sbjct: 2748 SYNTGSFNAGDTNTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGALMS 2796
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG LGL N TG +G N TG G+ N + G+ + T
Sbjct: 295 GIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG N NTG N NT
Sbjct: 355 STGLFNVGGFNTGVANVGSYNTGSFNAGNTNTGDFNPGNVNT 396
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + GL N G +GL N T G+GL N G+G N TG +GL + T
Sbjct: 3233 IGFANAGSNNFGLANMGIGNVGLANTGTNNLGIGLTGDNQTGIGGLNSGTGNVGLFNSGT 3292
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N GL N
Sbjct: 3293 GNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNA 3330
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N GL N NTG
Sbjct: 3282 TGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGIANAG 3341
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG N NTG + NTG N NTG N NT L+A
Sbjct: 3342 HHNTGSFNAGNTNTGDGNPGSINTGWFNTGNANTGVANAGNVNTGALIA 3390
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G G N G LGL +
Sbjct: 2637 GNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 2696
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2697 GTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNA 2736
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 2076 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2135
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG + N NT G
Sbjct: 2136 STGLFNAGSFNTGLANAGSYNTGSVNAGNTNTGGF 2170
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2680 GFGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGL--FNAG 2737
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + NTG + NTG N NT
Sbjct: 2738 GFNTGLANAGSYNTGSFNAGDTNTGDFNPGSINTGWFNTGNSNT 2781
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNVGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 3 GGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N N G+GL N G+G N TG LGL N TG +G N TG G+ +
Sbjct: 282 GNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNVGFFNSGTGNFGVFNS 341
Query: 61 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG + + NTG N NT
Sbjct: 342 GSYNTGVGNAGTASTGLFNVGGFNTGVANVGSYNTGSFNAGNTNT 386
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 49/119 (41%), Gaps = 17/119 (14%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 1471 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 1528
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
N NTG S NTG + + NTGG + NTG N NTG NT +A
Sbjct: 1529 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGTVNTGAFIA 1587
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 884 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 941
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 942 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 986
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 2043 GNIGLGNAGSNNVGFGNMGLGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 2102
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2103 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2142
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N TG GL N + G+ +
Sbjct: 3264 GIGLTGDNQTGIGGLNSGTGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVA 3323
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 93
GL N NTG + NTG N NTG
Sbjct: 3324 STGLVNAGGFNTGIANAGHHNTGSFNAGNTNTG 3356
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +GL N G G N G+GL N G G N G LGL N TG +G + T
Sbjct: 2058 GNMGLGNIGFGNTGTNNL---GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGT 2114
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + GL N
Sbjct: 2115 GNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANA 2152
>gi|379029711|dbj|BAL67444.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1600
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1147 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1206
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1207 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1254
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1139 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1198
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1199 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1240
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 560 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 619
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 620 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 654
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 552 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 611
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 612 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 653
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 1108 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1167
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1168 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1205
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 542 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 601
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 602 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 643
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 531 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 590
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 591 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 636
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 527 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 581
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 582 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 618
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 512 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 571
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 572 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 608
>gi|306805168|ref|ZP_07441836.1| hypothetical protein TMHG_03873, partial [Mycobacterium tuberculosis
SUMu008]
gi|308348283|gb|EFP37134.1| hypothetical protein TMHG_03873 [Mycobacterium tuberculosis SUMu008]
Length = 3633
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3180 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3239
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3240 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3287
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1999 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2058
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2059 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2102
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 231 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 290
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 291 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 339
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1400 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1459
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1460 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1494
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1957 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2016
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2017 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2075
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3172 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3231
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3232 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3273
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1349 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1408
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1409 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1448
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1392 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1451
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1452 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1496
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2593 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2652
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2653 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2687
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 223 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 282
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 283 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 324
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1981 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2040
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2041 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2082
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1913 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1972
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1973 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2027
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1369 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1428
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1429 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1483
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2585 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2644
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2645 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2686
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3141 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3200
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3201 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3238
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2575 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2634
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2635 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2676
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2009 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2068
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2069 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2126
Query: 109 T 109
+
Sbjct: 2127 S 2127
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2564 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2623
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2624 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2669
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1349 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1408
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1409 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1440
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 734 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 793
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 794 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 841
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2560 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2614
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2615 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2651
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2545 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2604
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2605 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2641
>gi|308406130|ref|ZP_07669518.1| hypothetical protein TMLG_03838 [Mycobacterium tuberculosis SUMu012]
gi|308364409|gb|EFP53260.1| hypothetical protein TMLG_03838 [Mycobacterium tuberculosis SUMu012]
Length = 2895
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 2442 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 2501
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 2502 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 2549
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1261 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 1320
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 1321 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 1364
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 662 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 721
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 722 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 756
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1219 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1278
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 1279 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 1337
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 2434 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 2493
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 2494 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 2535
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 611 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 670
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 671 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 710
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 654 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 713
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 714 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 758
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 1253 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 1312
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 1313 NTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNT 1354
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 1855 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 1914
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 1915 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 1949
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1243 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 1302
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 1303 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 1344
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1175 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1234
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1235 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 1289
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 631 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 690
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 691 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 745
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 1847 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 1906
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 1907 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 1948
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 2403 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 2462
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 2463 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 2500
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 1837 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 1896
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 1897 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 1938
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 1271 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 1330
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 1331 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 1388
Query: 109 T 109
+
Sbjct: 1389 S 1389
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 1826 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 1885
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 1886 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 1931
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 611 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 670
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 671 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 702
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 76 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 135
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 136 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 181
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 1822 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 1876
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 1877 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 1913
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 1807 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 1866
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 1867 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 1903
>gi|260806054|ref|XP_002597900.1| hypothetical protein BRAFLDRAFT_97887 [Branchiostoma floridae]
gi|229283169|gb|EEN53912.1| hypothetical protein BRAFLDRAFT_97887 [Branchiostoma floridae]
Length = 1236
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 46/101 (45%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
S G ++N N+ RNCN+ RNCN+ RN N+ RN N+ R+ N
Sbjct: 989 SEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSSRHNQRNYN 1048
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ RN N+ RNCN+ RN ++ RN N+
Sbjct: 1049 SSRHNQRNYNSSRHNQRNCNSSRHNHRNYSSSRHNQRNYNS 1089
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 42/96 (43%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ C + G ++N N+ RNCN+ RNCN+ RN N+ R+ N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
RN N+ RN N+ RNCN+ RN
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNSSRHNHRN 1076
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
+ C + G ++N N+ RNCN+ RNCN+ R+ N+ RN N+
Sbjct: 981 SILFPQCTSEGHVVKNYNSSRHNQRNCNSSKHNHRNCNSSRHNHRNYNSSRHNQRNYNSS 1040
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
RN N+ RN N+ RNCN+
Sbjct: 1041 RHNQRNYNSSRHNQRNYNSSRHNQRNCNS 1069
>gi|440582842|emb|CCG13245.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 1600
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1147 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1206
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1207 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1254
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1139 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1198
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1199 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1240
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 560 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 619
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 620 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 654
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 552 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 611
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 612 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 653
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 1108 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1167
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1168 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1205
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 542 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 601
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 602 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 643
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 531 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 590
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 591 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 636
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 527 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 581
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 582 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 618
>gi|308371316|ref|ZP_07424556.2| hypothetical protein TMCG_02499 [Mycobacterium tuberculosis SUMu003]
gi|308378287|ref|ZP_07668709.1| hypothetical protein TMIG_03622 [Mycobacterium tuberculosis SUMu009]
gi|308380663|ref|ZP_07669241.1| hypothetical protein TMKG_03697 [Mycobacterium tuberculosis SUMu011]
gi|308329157|gb|EFP18008.1| hypothetical protein TMCG_02499 [Mycobacterium tuberculosis SUMu003]
gi|308353007|gb|EFP41858.1| hypothetical protein TMIG_03622 [Mycobacterium tuberculosis SUMu009]
gi|308360797|gb|EFP49648.1| hypothetical protein TMKG_03697 [Mycobacterium tuberculosis SUMu011]
Length = 2973
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 2520 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 2579
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 2580 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 2627
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1339 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 1398
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 1399 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 1442
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 740 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 799
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 800 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 834
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1297 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1356
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 1357 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 1415
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 2512 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 2571
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 2572 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 2613
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 689 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 748
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 749 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 788
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 732 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 791
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 792 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 836
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 1933 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 1992
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 1993 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2027
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1321 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 1380
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 1381 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 1422
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1253 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1312
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1313 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 1367
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 709 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 768
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 769 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 823
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 1925 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 1984
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 1985 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2026
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 2481 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 2540
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 2541 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 2578
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 1915 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 1974
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 1975 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2016
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 1349 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 1408
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 1409 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 1466
Query: 109 T 109
+
Sbjct: 1467 S 1467
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 1904 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 1963
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 1964 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2009
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 689 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 748
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 749 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 780
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 154 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 213
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 214 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 259
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 74 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 133
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 134 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 181
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 1900 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 1954
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 1955 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 1991
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 1885 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 1944
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 1945 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 1981
>gi|148663212|ref|YP_001284735.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148507364|gb|ABQ75173.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 3674
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3221 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3280
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3281 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3328
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2040 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2099
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2100 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2143
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 272 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 331
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 332 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 380
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1441 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1500
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1501 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1535
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1998 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2057
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2058 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2116
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3213 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3272
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3273 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3314
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1390 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1449
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1450 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1489
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1433 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1492
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1493 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1537
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2634 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2693
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2694 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2728
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 264 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 323
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 324 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 365
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2022 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2081
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2082 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2123
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1954 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2013
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2014 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2068
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1410 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1469
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1470 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1524
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2626 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2685
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2686 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2727
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3182 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3241
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3242 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3279
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2616 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2675
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2676 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2717
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2050 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2109
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2110 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2167
Query: 109 T 109
+
Sbjct: 2168 S 2168
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2605 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2664
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2665 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2710
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1390 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1449
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1450 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1481
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 775 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 834
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 835 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 882
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2601 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2655
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2656 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2692
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2586 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2645
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2646 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2682
>gi|385996224|ref|YP_005914522.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|424948986|ref|ZP_18364682.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|339296178|gb|AEJ48289.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|358233501|dbj|GAA46993.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
Length = 1662
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1209 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1268
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1269 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1316
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 28 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 87
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 88 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 131
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1201 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1260
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1261 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1302
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 20 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 79
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 80 NTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNT 121
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 622 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 681
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 682 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 716
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 10 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 69
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 70 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 111
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 614 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 673
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 674 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 715
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 1170 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1229
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1230 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1267
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 604 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 663
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 664 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 705
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 38 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 97
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 98 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 155
Query: 109 T 109
+
Sbjct: 156 S 156
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 593 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 652
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 653 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 698
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL G+G N TG LGL N TG +G N TG GL + + G+ N T
Sbjct: 10 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 69
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N GL N NTG L + + NT G+
Sbjct: 70 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 104
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 589 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 643
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 644 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 680
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 574 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 633
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 634 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 670
>gi|297636010|ref|ZP_06953790.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 3716
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3263 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3322
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3323 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3370
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2082 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2141
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2142 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2185
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1483 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1542
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1543 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2158
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3255 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3314
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3315 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3356
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1531
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1475 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1534
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1535 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1579
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2676 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2735
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2736 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2064 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2124 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2165
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2055
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2056 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1452 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1511
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1512 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1566
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2668 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2727
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2728 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2769
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3224 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3283
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3284 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3321
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2658 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2717
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2718 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2759
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2092 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2151
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2152 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2209
Query: 109 T 109
+
Sbjct: 2210 S 2210
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2647 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2706
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2707 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2752
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1523
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2643 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2697
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2698 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2734
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2628 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2687
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2688 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2724
>gi|308373719|ref|ZP_07433433.2| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308336607|gb|EFP25458.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 3661
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3208 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3267
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3268 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3315
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2027 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2086
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2087 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2130
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 259 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 318
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 319 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 367
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1428 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1487
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1488 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1522
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1985 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2044
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2045 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2103
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3200 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3259
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3260 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3301
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1377 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1436
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1437 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1476
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1420 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1479
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1480 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1524
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2621 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2680
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2681 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2715
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 251 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 310
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 311 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 352
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2009 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2068
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2069 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2110
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1941 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2000
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2001 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2055
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1397 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1456
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1457 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1511
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2613 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2672
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2673 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2714
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3169 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3228
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3229 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3266
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2603 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2662
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2663 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2704
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2037 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2096
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2097 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2154
Query: 109 T 109
+
Sbjct: 2155 S 2155
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2592 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2651
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2652 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2697
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1377 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1436
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1437 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1468
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 762 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 821
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 822 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 869
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2588 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2642
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2643 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2679
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2573 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2632
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2633 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2669
>gi|306799322|ref|ZP_07437624.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308340479|gb|EFP29330.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 3662
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3209 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3268
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3269 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3316
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2028 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2087
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2088 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2131
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 260 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 319
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 320 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 368
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1429 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1488
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1489 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1523
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1986 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2045
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2046 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2104
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3201 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3260
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3261 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3302
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1378 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1437
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1438 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1477
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1421 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1480
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1481 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1525
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2622 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2681
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2682 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2716
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 252 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 311
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 312 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 353
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2010 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2069
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2070 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2111
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1942 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2001
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2002 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2056
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1398 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1457
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1458 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1512
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2614 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2673
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2674 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2715
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3170 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3229
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3230 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3267
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2604 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2663
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2664 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2705
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2038 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2097
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2098 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2155
Query: 109 T 109
+
Sbjct: 2156 S 2156
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2593 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2652
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2653 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2698
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1378 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1437
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1438 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1469
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 763 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 822
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 823 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 870
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2589 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2643
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2644 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2680
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2574 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2633
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2634 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2670
>gi|57117096|ref|YP_177964.1| PPE family protein PPE56 [Mycobacterium tuberculosis H37Rv]
gi|313660340|ref|ZP_07817220.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|386000144|ref|YP_005918443.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|397675297|ref|YP_006516832.1| hypothetical protein RVBD_3350c [Mycobacterium tuberculosis H37Rv]
gi|7478767|pir||E70969 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|344221191|gb|AEN01822.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|395140202|gb|AFN51361.1| hypothetical protein RVBD_3350c [Mycobacterium tuberculosis H37Rv]
gi|444896905|emb|CCP46171.1| PPE family protein PPE56 [Mycobacterium tuberculosis H37Rv]
Length = 3716
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3263 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3322
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3323 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3370
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2082 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2141
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2142 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2185
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1483 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1542
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1543 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2158
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3255 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3314
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3315 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3356
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1531
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1475 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1534
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1535 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1579
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2676 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2735
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2736 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2064 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2124 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2165
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2055
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2056 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1452 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1511
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1512 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1566
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2668 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2727
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2728 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2769
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3224 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3283
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3284 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3321
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2658 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2717
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2718 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2759
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2092 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2151
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2152 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2209
Query: 109 T 109
+
Sbjct: 2210 S 2210
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2647 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2706
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2707 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2752
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1523
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S G N +GL N TG G+GL N G+G N G +GL N TG +G +
Sbjct: 2634 SANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFN 2693
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2694 SGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2734
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2628 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2687
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2688 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2724
>gi|306777690|ref|ZP_07416027.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu001]
gi|308213981|gb|EFO73380.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 3727
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3274 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3333
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3334 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3381
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2093 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2152
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2153 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2196
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 325 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 384
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 385 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 433
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1494 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1553
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1554 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1588
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2051 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2110
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2111 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2169
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3266 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3325
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3326 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3367
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1443 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1502
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1503 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1542
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1486 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1545
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1546 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1590
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2687 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2746
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2747 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2781
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 317 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 376
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 377 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 418
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2075 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2134
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2135 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2176
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 2007 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2066
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2067 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2121
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1463 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1522
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1523 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1577
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2679 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2738
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2739 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2780
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3235 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3294
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3295 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3332
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2669 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2728
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2729 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2770
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2103 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2162
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2163 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2220
Query: 109 T 109
+
Sbjct: 2221 S 2221
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2658 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2717
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2718 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2763
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1443 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1502
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1503 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1534
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 828 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 887
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 888 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 935
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2654 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2708
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2709 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2745
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2639 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2698
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2699 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2735
>gi|443709326|gb|ELU04035.1| hypothetical protein CAPTEDRAFT_190950 [Capitella teleta]
Length = 123
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
Query: 20 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRN 79
CN G + CN G + CN G + CN G + CN G + CN G +
Sbjct: 2 CNKRTRGYQMCNKRTRGYQMCNKRTRGYQMCNKRTRGYQMCNKRTRGYQMCNKRTRGYQM 61
Query: 80 CNTGGLGLRNCNTGGLGLRNCNTRGL-VAFTGPT 112
CN G + CN G + CN R F PT
Sbjct: 62 CNKRTQGYQMCNKRTRGYQMCNKRTRGYQFAAPT 95
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
G + CN G + CN G + CN G + CN G + CN G + CN
Sbjct: 8 GYQMCNKRTRGYQMCNKRTRGYQMCNKRTRGYQMCNKRTRGYQMCNKRTRGYQMCNKRTQ 67
Query: 66 GLRNCNTGGLGLRNCNTGGLGLR-NCNTGGLGL 97
G + CN G + CN G + TGG+ +
Sbjct: 68 GYQMCNKRTRGYQMCNKRTRGYQFAAPTGGVAV 100
>gi|156357622|ref|XP_001624314.1| predicted protein [Nematostella vectensis]
gi|156211084|gb|EDO32214.1| predicted protein [Nematostella vectensis]
Length = 128
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------------N 41
+S LG+ N ++ LG N ++ LG N ++ LG N N
Sbjct: 1 VSPSLGVHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAHNTDSPSLGAPHNTGSPSLGAHN 60
Query: 42 TGGLGLRNCNTGGLGLRSCNTGGLGL-RNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLR 98
TG L L NTG L + NT L NTG L NTG L L NTG LG
Sbjct: 61 TGSLSLGAHNTGSPSLGAHNTDSPSLGAPHNTGSPSLGAHNTGSLSLGAHNTGSPSLGAH 120
Query: 99 NCNTRGL 105
N ++ L
Sbjct: 121 NTDSPSL 127
>gi|289755480|ref|ZP_06514858.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289696067|gb|EFD63496.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length = 3716
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3263 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3322
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3323 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3370
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2082 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2141
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2142 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2185
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1483 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1542
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1543 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2158
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3255 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3314
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3315 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3356
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1531
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1475 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1534
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1535 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1579
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2676 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2735
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2736 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2770
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2064 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2124 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2165
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2055
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2056 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1452 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1511
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1512 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1566
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2668 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2727
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2728 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2769
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3224 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3283
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3284 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3321
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2658 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2717
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2718 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2759
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N + G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSDIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2092 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2151
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2152 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2209
Query: 109 T 109
+
Sbjct: 2210 S 2210
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2647 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2706
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2707 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2752
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1523
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S G N +GL N TG G+GL N G+G N G +GL N TG +G +
Sbjct: 2634 SANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFN 2693
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2694 SGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2734
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2628 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2687
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2688 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2724
>gi|297733008|ref|ZP_06962126.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
Length = 3725
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3272 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3331
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3332 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3379
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2091 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2150
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2151 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2194
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 323 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 382
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 383 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 431
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1492 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1551
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1552 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1586
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2049 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2108
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2109 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2167
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3264 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3323
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3324 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3365
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1540
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1484 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1543
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1544 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2685 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2744
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2745 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2779
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 315 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 374
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 375 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 416
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2073 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2132
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2133 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2174
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 2005 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2064
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2065 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2119
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1461 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1520
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1521 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1575
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2677 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2736
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2737 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2778
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3233 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3292
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3293 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3330
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2667 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2726
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2727 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2768
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2101 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2160
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2161 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2218
Query: 109 T 109
+
Sbjct: 2219 S 2219
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2656 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2715
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2716 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2761
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1532
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 826 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 885
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 886 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 933
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2652 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2706
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2707 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2743
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2637 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2696
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2697 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2733
>gi|385992591|ref|YP_005910889.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339299784|gb|AEJ51894.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3725
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3272 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3331
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3332 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3379
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2091 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2150
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2151 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2194
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 323 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 382
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 383 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 431
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1492 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1551
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1552 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1586
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2049 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2108
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2109 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2167
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3264 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3323
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3324 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3365
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1540
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1484 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1543
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1544 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1588
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2685 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2744
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2745 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2779
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 315 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 374
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 375 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 416
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2073 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2132
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2133 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2174
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 2005 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2064
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2065 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2119
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1461 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1520
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1521 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1575
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2677 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2736
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2737 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2778
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3233 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3292
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3293 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3330
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2667 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2726
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2727 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2768
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2101 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2160
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2161 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2218
Query: 109 T 109
+
Sbjct: 2219 S 2219
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2656 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2715
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2716 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2761
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1532
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 826 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 885
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 886 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 933
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 2652 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 2706
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 2707 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2743
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2637 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2696
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2697 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2733
>gi|375297625|ref|YP_005101892.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|328460130|gb|AEB05553.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 3787
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3334 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3393
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3394 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3441
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2153 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2212
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2213 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2256
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 385 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 444
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 445 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 493
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1554 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1613
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1614 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1648
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2111 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2170
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2171 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2229
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3326 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3385
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3386 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3427
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1602
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1546 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1605
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1606 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1650
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2747 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2806
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2807 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2841
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 377 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 436
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 437 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 478
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2135 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2194
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2195 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2236
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 2067 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2126
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2127 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2181
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1523 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1582
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1583 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1637
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2739 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2798
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2799 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2840
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3295 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3354
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3355 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3392
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2729 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2788
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2789 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2830
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2163 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2222
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2223 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2280
Query: 109 T 109
+
Sbjct: 2281 S 2281
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2718 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2777
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2778 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2823
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1594
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 888 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 947
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 948 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 995
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S G N +GL N TG G+GL N G+G N G +GL N TG +G +
Sbjct: 2705 SANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFN 2764
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2765 SGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2805
Score = 34.3 bits (77), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2699 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2758
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2759 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2795
>gi|148824559|ref|YP_001289313.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253800397|ref|YP_003033398.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|392433836|ref|YP_006474880.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|148723086|gb|ABR07711.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|253321900|gb|ACT26503.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|392055245|gb|AFM50803.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3787
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 3334 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 3393
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 3394 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 3441
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2153 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2212
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2213 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2256
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 385 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 444
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 445 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 493
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1554 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1613
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1614 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1648
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2111 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2170
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2171 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2229
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 3326 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 3385
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 3386 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 3427
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1602
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1546 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1605
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1606 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1650
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2747 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2806
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2807 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2841
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 377 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 436
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 437 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 478
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2135 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2194
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2195 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2236
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 2067 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2126
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2127 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2181
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1523 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1582
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1583 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1637
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2739 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2798
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2799 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2840
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 3295 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 3354
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 3355 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 3392
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2729 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2788
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2789 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2830
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2163 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2222
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2223 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2280
Query: 109 T 109
+
Sbjct: 2281 S 2281
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2718 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2777
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2778 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2823
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1594
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 888 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 947
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 948 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 995
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S G N +GL N TG G+GL N G+G N G +GL N TG +G +
Sbjct: 2705 SANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFN 2764
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2765 SGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2805
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2699 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2758
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2759 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2795
>gi|433633369|ref|YP_007266996.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070017]
gi|432164962|emb|CCK62429.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070017]
Length = 3507
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGFLNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 44/90 (48%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + TG G+ N G
Sbjct: 2042 GIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGF 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N TG G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGFLNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGFLNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N TG G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N TG G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N TG G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N TG G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGTGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GL N TG +G+ N TG G+ N NTG + NTG L N NTG N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
TG + NT G + NTG L + NTG + NT G +
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGFI 1711
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
+G G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 TGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG + NTG + NTG + NTG + NT +
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 2/90 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRSCNTGGLGLRNCNT 72
+GL N + G N LG N + +G N N G+GL N G G N T
Sbjct: 2001 IGLSNLGSYNFGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGT 2060
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N T +GL N TG +G+ N T
Sbjct: 2061 ANTGLFNSGTNNIGLFNSGTGNIGIGNSGT 2090
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N G+G N + +GL N TG +G+ N T
Sbjct: 2644 GFGVGLSGDNQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGT 2684
>gi|433628492|ref|YP_007262121.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
gi|432156098|emb|CCK53351.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
Length = 3733
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--- 58
+G LGL N TG +G N TG GL N + G+ N TG GL N + GL
Sbjct: 2093 AGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSFNTGLANAG 2152
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + N NTGG N NTG + NTG N NT
Sbjct: 2153 SYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNTGLFNTGNVNT 2196
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG +
Sbjct: 313 TGNLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNVGGFNTGVGNVG 372
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG + NTG L N NTG N NT ++
Sbjct: 373 SYNTGSFNAGSTNTGGFNPGSVNTGWLNTGNTNTGIANSGNVNTGAFIS 421
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N GL N NTG
Sbjct: 1478 AGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAG 1537
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTGG N NTG + NTG + N NTG NT +A
Sbjct: 1538 HDNTGGFNAGNTNTGAFNPGSINTGWFNIGNANTGIANSGTVNTGAFIA 1586
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL + +
Sbjct: 2085 GFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNAGSF 2144
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + N NTGG N NTG + NT
Sbjct: 2145 NTGLANAGSYNTGSVNAGNTNTGGFNPGNVNTGWFNAGHTNT 2186
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 2687 AGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNAGGFNTGLANAG 2746
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG + NTG N NTG N +T L++
Sbjct: 2747 SYNTGSFNAGDTNTGDFNPGSINTGWFNTGNSNTGIANAGNVDTGALMS 2795
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N GL N NTG
Sbjct: 891 AGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNFNTGVANAG 950
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
NTG N NTG + NTG + N NTG
Sbjct: 951 HDNTGSFNAGNTNTGAFNPGSINTGWFNIGNANTG 985
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 262 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 322 GTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N G +GL N TG +G N TG GL N + G+ N GL +
Sbjct: 1470 GFGGLNSGAGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNF 1529
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTGG N NTG + NTG + N NT
Sbjct: 1530 NTGVANAGHDNTGGFNAGNTNTGAFNPGSINTGWFNIGNANT 1571
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + GL N G +GL N T G+GL N G+G N TG +GL + T
Sbjct: 3231 IGFANAGSNNFGLANMGIGNVGLANTGTNNLGIGLTGDNQTGIGGLNSGTGNVGLFNSGT 3290
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N GL N
Sbjct: 3291 GNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNA 3328
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N GL N NTG
Sbjct: 3280 TGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVASTGLVNAGGFNTGIANAG 3339
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG N NTG + NTG N NTG N NT L+A
Sbjct: 3340 HHNTGSFNAGNTNTGDGNPGSINTGWFNTGNANTGVANAGNVNTGALIA 3388
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G G N G LGL +
Sbjct: 2636 GNIGLGNAGSNNVGLANMGVGNIGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 2695
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2696 GTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGLFNA 2735
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N G LGL N TG +G N TG GL + + G+ N TG
Sbjct: 2075 GIGLTGDNQTGFGGLNSGAGNLGLFNSGTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTG 2134
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N + GL N NTG + N NT G
Sbjct: 2135 STGLFNAGSFNTGLANAGSYNTGSVNAGNTNTGGF 2169
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N G +GL N TG +G N TG GL N + G+ N GL +
Sbjct: 883 GFGGLNSGAGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGVASTGLFNAGNF 942
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG N NTG + NTG + N NT
Sbjct: 943 NTGVANAGHDNTGSFNAGNTNTGAFNPGSINTGWFNIGNANT 984
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G LGL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 2679 GFGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSFNTGVGNSGTGSTGL--FNAG 2736
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + NTG + NTG N NT
Sbjct: 2737 GFNTGLANAGSYNTGSFNAGDTNTGDFNPGSINTGWFNTGNSNT 2780
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 271 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNVGFFN 330
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 331 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNV 361
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCN 61
GLGL G +GL N + GL N G +G N N G+GL N G+G +
Sbjct: 254 GLGLP-PGMGNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSG 312
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG LGL N TG +G N TG G+ N + G+ N T
Sbjct: 313 TGNLGLFNSGTGNVGFFNSGTGNFGVFNSGSYNTGVGNAGTA 354
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +G N G +G N T G+GL N G G N G LGL +
Sbjct: 2042 GNIGLGNAGSNNVGFGNMGLGNVGFGNTGTNNLGIGLTGDNQTGFGGLNSGAGNLGLFNS 2101
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 2102 GTGNIGFFNTGTGNWGLFNSGSYNTGIGNSGTGSTGLFNA 2141
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 43/93 (46%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N TG GL N + G+ +
Sbjct: 3262 GIGLTGDNQTGIGGLNSGTGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGVA 3321
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTG 93
GL N NTG + NTG N NTG
Sbjct: 3322 STGLVNAGGFNTGIANAGHHNTGSFNAGNTNTG 3354
>gi|291225199|ref|XP_002732588.1| PREDICTED: ubiquitin protein ligase E3 component n-recognin 4-like,
partial [Saccoglossus kowalevskii]
Length = 267
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 39/102 (38%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ L +C + L +C + L C + L +C + L +C + L SC
Sbjct: 42 PVNLNSCTPMPVNLNSCTPMPVNLNTCTPMPVNLNSCTPMPVNLNSCTPMPVNLNSCTPM 101
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ L C + L NC + L +C + L +C +
Sbjct: 102 PVNLNTCTPYAINLNNCTPMPVNLNSCTPMPVNLNSCTPMPV 143
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 38/102 (37%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ L C + L +C + L +C + L C + L +C + L SC
Sbjct: 32 PVNLNTCTPMPVNLNSCTPMPVNLNSCTPMPVNLNTCTPMPVNLNSCTPMPVNLNSCTPM 91
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ L +C + L C + L NC + L +C +
Sbjct: 92 PVNLNSCTPMPVNLNTCTPYAINLNNCTPMPVNLNSCTPMPV 133
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 30/77 (38%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ L +C + L +C + L +C + L C + L NC + L SC
Sbjct: 72 PVNLNSCTPMPVNLNSCTPMPVNLNSCTPMPVNLNTCTPYAINLNNCTPMPVNLNSCTPM 131
Query: 64 GLGLRNCNTGGLGLRNC 80
+ L +C + L C
Sbjct: 132 PVNLNSCTPMPVNLNTC 148
>gi|289576081|ref|ZP_06456308.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289540512|gb|EFD45090.1| predicted protein [Mycobacterium tuberculosis K85]
Length = 1475
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1022 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1081
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1082 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1129
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1014 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1073
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1074 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1115
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 435 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 494
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 495 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 529
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 983 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1042
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1043 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1080
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 427 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 486
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 487 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 528
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 417 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 476
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 477 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 518
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 406 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 465
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 466 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 511
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 6 GLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+RN +GL N TG G+GL N G+G N G +GL N TG +G + TG
Sbjct: 402 GVRN-----IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTG 456
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+ N + G+ N TG GL N + G+ N
Sbjct: 457 NFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 493
>gi|306790603|ref|ZP_07428925.1| hypothetical protein TMDG_03784, partial [Mycobacterium tuberculosis
SUMu004]
gi|308332990|gb|EFP21841.1| hypothetical protein TMDG_03784 [Mycobacterium tuberculosis SUMu004]
Length = 2110
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1657 AGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANAG 1716
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG L N NTG N NT V
Sbjct: 1717 SYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANTGVANAGNVNTGAFV 1764
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 476 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 535
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 536 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 579
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 434 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 493
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 494 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 552
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N G +G N TG GL N + G+ N TG GL S
Sbjct: 1649 GIGGLNSGAGNLGLFNSGAGNVGFFNTGTGNFGLFNSGSFNTGVGNSGTGSTGLFNAGSF 1708
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG + NTG L N NT
Sbjct: 1709 NTGVANAGSYNTGSFNVGDTNTGGFNPGSINTGWLNAGNANT 1750
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 1070 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 1129
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 1130 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 1164
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 458 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 517
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 518 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 559
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 390 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 449
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 450 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 504
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 1062 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 1121
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 1122 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 1163
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL N G +GL N TG G+GL G+G N G LGL N G +G + T
Sbjct: 1618 WGLANVGVGNIGLANTGTGNIGIGLTGDYQTGIGGLNSGAGNLGLFNSGAGNVGFFNTGT 1677
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N + G+ N
Sbjct: 1678 GNFGLFNSGSFNTGVGNSGTGSTGLFNAGSFNTGVANA 1715
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 1052 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 1111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 1112 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 1153
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 486 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 545
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 546 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 603
Query: 109 T 109
+
Sbjct: 604 S 604
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 1041 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 1100
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 1101 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 1146
>gi|31791532|ref|NP_854025.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31617118|emb|CAD93225.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 3507
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|308379758|ref|ZP_07669042.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308363761|gb|EFP52612.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 2358
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2039 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2098
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2099 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2128
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2049 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2108
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2109 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2141
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2061 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2120
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2121 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2160
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1591 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1650
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1651 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1694
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2070 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2129
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2130 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2170
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2018 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2077
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2078 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2117
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2077 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2136
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2137 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2180
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1587 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1646
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1647 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1684
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2091 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2150
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2151 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2194
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1570 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1629
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1630 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1677
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1604 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1663
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1664 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1707
>gi|121636268|ref|YP_976491.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988740|ref|YP_002643427.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378770101|ref|YP_005169834.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449062349|ref|YP_007429432.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121491915|emb|CAL70378.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771853|dbj|BAH24659.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600284|emb|CCC62954.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356592422|gb|AET17651.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449030857|gb|AGE66284.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 3507
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|289445893|ref|ZP_06435637.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418851|gb|EFD16052.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 3507
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|289572940|ref|ZP_06453167.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537371|gb|EFD41949.1| PE family protein [Mycobacterium tuberculosis K85]
Length = 3507
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|289752384|ref|ZP_06511762.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289692971|gb|EFD60400.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 3487
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
>gi|289744051|ref|ZP_06503429.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289684579|gb|EFD52067.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3116
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 577 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 636
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 637 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 677
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 560 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 619
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 620 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 657
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 1925 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 1984
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 1985 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2014
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 568 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 627
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 628 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 667
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 1935 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 1994
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 1995 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2027
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 584 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 643
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 644 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 692
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 1947 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2006
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2007 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2046
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 1956 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2015
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2016 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2056
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 1904 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 1963
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 1964 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2003
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1477 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1536
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1537 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1580
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 1963 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2022
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2023 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2066
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1473 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1532
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1533 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1570
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 1977 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2036
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2037 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2080
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1456 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1515
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1516 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1563
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1490 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1549
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1550 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1593
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2415 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2474
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2475 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2525
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 49/109 (44%), Gaps = 4/109 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 57
+G +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 185 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 244
Query: 58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
+ NTG N NTGG + NTG L N NTG N NT +
Sbjct: 245 GNYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 293
>gi|306796089|ref|ZP_07434391.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
gi|308343466|gb|EFP32317.1| PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 3253
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNLGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNLGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNLGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N NTG + NTG L N NTG + NTG
Sbjct: 1614 TGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAG 1673
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
S NT G + NTG L + NTG + NTGG
Sbjct: 1674 SFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|306779195|ref|ZP_07417532.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|306782982|ref|ZP_07421304.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|306787350|ref|ZP_07425672.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|306791903|ref|ZP_07430205.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
gi|308327846|gb|EFP16697.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
gi|308332200|gb|EFP21051.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308335985|gb|EFP24836.1| PPE family protein [Mycobacterium tuberculosis SUMu004]
gi|308339560|gb|EFP28411.1| PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 3253
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|15839741|ref|NP_334778.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|422811279|ref|ZP_16859682.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|13879867|gb|AAK44592.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|323721242|gb|EGB30301.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 3275
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N T GL N T +GL N TG +G+ N G G+ + G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
GL N TG GL N TG +G+ N NTGG + + NT
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNT 2143
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGSFNDGDFNT 2153
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
TGG + + NTG + NTG + NTG + NT +
Sbjct: 2133 TGGYNVGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2177
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGSFNDGDFNTGFYNTGDYNT 2163
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2564 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2623
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2624 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2674
>gi|253797281|ref|YP_003030282.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297632840|ref|ZP_06950620.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297729815|ref|ZP_06958933.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313657144|ref|ZP_07814024.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|375294563|ref|YP_005098830.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|385997129|ref|YP_005915427.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|392385073|ref|YP_005306702.1| PPE8 [Mycobacterium tuberculosis UT205]
gi|392430773|ref|YP_006471817.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253318784|gb|ACT23387.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328457068|gb|AEB02491.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|344218175|gb|AEM98805.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|378543624|emb|CCE35895.1| PPE8 [Mycobacterium tuberculosis UT205]
gi|392052182|gb|AFM47740.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 3275
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|289748838|ref|ZP_06508216.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289689425|gb|EFD56854.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 3125
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N + G
Sbjct: 2052 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVG 2111
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2112 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2141
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N + G GL + TG
Sbjct: 2062 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTG 2121
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2122 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2154
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG +G+ N TG G+ N NTG
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L N NTG + NTG + NT G + NT
Sbjct: 1654 DVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1697
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N + G GL N TG GL + TG +
Sbjct: 2074 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNM 2133
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2134 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2173
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N + G GL N TG GL N TG +G+ + N
Sbjct: 2083 IGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2142
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2143 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2183
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCNTGG 64
N +G GL N T +GL N TG +G+ N TG +G+ N TG G+ NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNIGIGNSGTGNWGIANTGDTNTGI 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ NTG L N NTG + NTG + NT G
Sbjct: 1650 FNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1690
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2031 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2090
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N + G GL N TG GL N T
Sbjct: 2091 GNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGT 2130
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N + G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2090 TGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2149
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2150 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2193
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N + G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2104 GIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2163
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2164 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2207
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCN 51
+GL N TG +G+ N TG +G+ N TG G+ N NTG L N N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
TG NTG + NT G + NTG L + NTG + NT G +
Sbjct: 1667 TGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGFI 1721
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G N LG N + +G N N G+GL N G G N T GL + T
Sbjct: 2021 FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+GL N TG +G+ N G G+ N + G GL N T
Sbjct: 2081 NNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGT 2120
>gi|289441734|ref|ZP_06431478.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289414653|gb|EFD11893.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 3485
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N + G
Sbjct: 2040 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVG 2099
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2100 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2129
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N + G GL + TG
Sbjct: 2050 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTG 2109
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2110 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2142
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N + G GL N TG GL + TG +
Sbjct: 2062 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNM 2121
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2122 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2161
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N + G GL N TG GL N TG +G+ + N
Sbjct: 2071 IGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2130
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2131 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2171
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2019 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2078
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N + G GL N TG GL N T
Sbjct: 2079 GNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGT 2118
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N + G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2078 TGNIGIGNSGIGNTGIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2137
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2138 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2181
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N + G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2092 GIGNPDVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2151
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2152 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2195
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1592 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1651
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1652 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1695
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1588 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1647
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1648 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1685
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1571 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1630
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1631 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1678
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1605 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1664
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1665 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1708
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G N LG N + +G N N G+GL N G G N T GL + T
Sbjct: 2009 FGFGNAGDFNLGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGT 2068
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+GL N TG +G+ N G G+ N + G GL N T
Sbjct: 2069 NNIGLFNSGTGNIGIGNSGIGNTGIGNPDVGNTGLGNSGT 2108
>gi|148660070|ref|YP_001281593.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148504222|gb|ABQ72031.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 2373
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1209 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1268
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1269 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1310
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 1589 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 1648
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1649 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1686
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 362 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 421
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 422 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 463
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2145 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2204
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 2205 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 2246
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 370 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 429
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 430 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 476
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1178 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1237
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1238 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1280
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1158 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1217
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1218 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1255
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1188 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1247
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1248 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1295
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 28/131 (21%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------------------ 40
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1651 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1710
Query: 41 ----NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
NTG + + NTG S NTG L + NTG + NTG + NTG
Sbjct: 1711 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVAN 1770
Query: 97 LRNCNTRGLVA 107
N NT ++
Sbjct: 1771 TGNVNTGAFIS 1781
>gi|440579807|emb|CCG10210.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 3295
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|289756369|ref|ZP_06515747.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289711933|gb|EFD75945.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 2199
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1040 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1099
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1100 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1141
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 1420 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 1479
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1480 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1517
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 193 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 252
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 253 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 294
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 1971 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2030
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
NTG + NTG + NTGG + NTG L + NT VA TG G
Sbjct: 2031 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTG--VANTGDVDTG 2083
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 201 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 260
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 261 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1009 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1068
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1069 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1111
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 989 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1048
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1049 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1086
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1126
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 1482 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1541
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 1542 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 1592
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 1489 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 1548
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 1549 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 1607
>gi|57116719|ref|YP_177714.1| PPE family protein PPE5 [Mycobacterium tuberculosis H37Rv]
gi|289760413|ref|ZP_06519791.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|397672095|ref|YP_006513630.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|7478698|pir||A70524 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
gi|289707919|gb|EFD71935.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|395137000|gb|AFN48159.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444893780|emb|CCP43034.1| PPE family protein PPE5 [Mycobacterium tuberculosis H37Rv]
Length = 2204
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1040 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1099
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1100 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1141
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 1420 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 1479
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1480 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1517
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 193 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 252
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 253 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 294
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 1976 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2035
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
NTG + NTG + NTGG + NTG L + NT VA TG G
Sbjct: 2036 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTG--VANTGDVDTG 2088
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 201 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 260
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 261 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1009 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1068
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1069 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1111
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 989 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1048
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1049 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1086
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1126
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 28/131 (21%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------------------ 40
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1482 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1541
Query: 41 ----NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
NTG + + NTG S NTG L + NTG + NTG + NTG
Sbjct: 1542 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVAN 1601
Query: 97 LRNCNTRGLVA 107
N NT ++
Sbjct: 1602 TGNVNTGAFIS 1612
>gi|121636220|ref|YP_976443.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988693|ref|YP_002643380.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378770053|ref|YP_005169786.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449062301|ref|YP_007429384.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121491867|emb|CAL70330.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771806|dbj|BAH24612.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600236|emb|CCC62906.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356592374|gb|AET17603.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449030809|gb|AGE66236.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1975
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRSC 60
G G N + +GL N +G +GL N TG G+ N TG GL N NTG
Sbjct: 281 GFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDV 340
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG N NTG N NTG + NTG N NT +A
Sbjct: 341 NTGNFNTGNYNTGSFNAGNYNTGYFNTGDYNTGVANTGNVNTGAFIA 387
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
G +GL N +G G+ N TG G+ N G G+ N + GL N NTG L
Sbjct: 709 DGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAGNFGIGNAGSTNTGLFNSGDLNTGSLNPG 768
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG N NTG + NTG N NT ++
Sbjct: 769 SYNTGSVNTGSVNTGGFNAGNYNTGYFNTGDYNTGMANTGNINTGAFIS 817
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 1165 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 1224
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 1225 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 1266
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 1173 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 1232
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 1233 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 1279
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 39/87 (44%), Gaps = 3/87 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +GL N TG G+ N TG GL N NTG + NTG N NTG
Sbjct: 299 SGNVGLFNSGTGNFGIGNSGTGNFGLGNTGSTNTGWFNTGDVNTGNFNTGNYNTGSFNAG 358
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGL 85
+ NTG + NTG N NTG
Sbjct: 359 NYNTGYFNTGDYNTGVANTGNVNTGAF 385
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N G+GL G G N + +GL N +G +GL N TG G+ + TG
Sbjct: 261 GFGNTGSNNVGIGLTGNGQIGFGSFNSGSHNIGLFNSGSGNVGLFNSGTGNFGIGNSGTG 320
Query: 64 GLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG N NTG N NT
Sbjct: 321 NFGLGNTGSTNTGWFNTGDVNTGNFNTGNYNTGSFNAGNYNT 362
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N + +GL N G +GL N +G G+ N TG G+ + G
Sbjct: 681 GIGLTGSGQIGFGSLNSGSHNIGLFNSGDGNIGLFNSGSGNFGIGNAGTGNWGIGNSGAG 740
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTG L + NTG + + NTGG N NT
Sbjct: 741 NFGIGNAGSTNTGLFNSGDLNTGSLNPGSYNTGSVNTGSVNTGGFNAGNYNT 792
>gi|308377403|ref|ZP_07668506.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
gi|308355903|gb|EFP44754.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 862
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
>gi|308375137|ref|ZP_07442828.2| PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308347357|gb|EFP36208.1| PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 3249
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 690 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 749
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 750 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 790
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 673 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 732
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 733 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 770
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2038 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2097
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2098 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2127
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 681 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 740
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 741 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 780
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2048 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2107
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2108 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2140
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 697 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 756
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 757 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 805
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2060 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2119
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2120 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2159
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2069 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2128
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2129 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2169
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2017 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2076
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2077 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2116
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1590 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1649
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1650 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1693
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2076 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2135
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2136 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2179
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1586 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1645
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1646 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1683
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2090 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2149
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2150 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2193
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1569 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1628
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1629 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1676
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1603 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1662
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1663 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1706
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2580 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2639
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2640 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2690
>gi|308376358|ref|ZP_07668254.1| hypothetical protein TMHG_03315 [Mycobacterium tuberculosis SUMu008]
gi|308351333|gb|EFP40184.1| hypothetical protein TMHG_03315 [Mycobacterium tuberculosis SUMu008]
Length = 2271
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1107 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1166
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1167 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1208
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 1487 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 1546
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1547 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1584
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 260 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 319
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 320 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 361
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2043 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2102
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
NTG + NTG + NTGG + NTG L + NT VA TG G
Sbjct: 2103 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTG--VANTGDVDTG 2155
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 268 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 327
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 328 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 374
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1076 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1135
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1136 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1178
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1056 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1115
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1116 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1153
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1086 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1145
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1146 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1193
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 28/131 (21%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------------------ 40
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1549 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1608
Query: 41 ----NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
NTG + + NTG S NTG L + NTG + NTG + NTG
Sbjct: 1609 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVAN 1668
Query: 97 LRNCNTRGLVA 107
N NT ++
Sbjct: 1669 TGNVNTGAFIS 1679
>gi|308231517|ref|ZP_07663877.1| hypothetical protein TMAG_03673 [Mycobacterium tuberculosis SUMu001]
gi|308216993|gb|EFO76392.1| hypothetical protein TMAG_03673 [Mycobacterium tuberculosis SUMu001]
Length = 2271
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1107 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1166
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1167 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1208
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 1487 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 1546
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1547 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1584
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 260 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 319
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 320 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 361
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2043 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2102
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
NTG + NTG + NTGG + NTG L + NT VA TG G
Sbjct: 2103 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTG--VANTGDVDTG 2155
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 268 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 327
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 328 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 374
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1076 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1135
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1136 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1178
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1056 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1115
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1116 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1153
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1086 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1145
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1146 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1193
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 28/131 (21%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------------------ 40
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1549 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1608
Query: 41 ----NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
NTG + + NTG S NTG L + NTG + NTG + NTG
Sbjct: 1609 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVAN 1668
Query: 97 LRNCNTRGLVA 107
N NT ++
Sbjct: 1669 TGNVNTGAFIS 1679
>gi|254549298|ref|ZP_05139745.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 3280
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2047 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2106
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2107 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2136
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2057 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2116
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2117 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2149
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2069 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2128
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2129 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2168
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2078 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2137
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2138 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2178
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2026 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2085
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2086 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2125
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2085 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2144
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2145 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2188
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2099 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2158
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2159 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2202
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 45/101 (44%), Gaps = 8/101 (7%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L N NTG + NTG + NTG + NT G
Sbjct: 1650 LNAGNVNTGIFNTGHYNTG-----HYNTGSFNAGSFNTAGF 1685
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NTG + NT G + NT
Sbjct: 1654 NVNTGIFNTGHYNTG-----HYNTGSFNAGSFNTAGFNPGSYNT 1692
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2589 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2648
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2649 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2699
>gi|167967605|ref|ZP_02549882.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 2255
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1091 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1150
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1151 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1192
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 1471 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 1530
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1531 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1568
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 244 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 303
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 304 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 345
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 2027 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2086
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
NTG + NTG + NTGG + NTG L + NT VA TG G
Sbjct: 2087 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTG--VANTGDVDTG 2139
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 252 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 311
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 312 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 358
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1060 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1119
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1120 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1162
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 1040 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1099
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1100 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1137
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1070 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1129
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1130 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1177
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 28/131 (21%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------------------ 40
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1533 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1592
Query: 41 ----NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
NTG + + NTG S NTG L + NTG + NTG + NTG
Sbjct: 1593 TGVGNTGSINTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVAN 1652
Query: 97 LRNCNTRGLVA 107
N NT ++
Sbjct: 1653 TGNVNTGAFIS 1663
>gi|306801949|ref|ZP_07438617.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
gi|308351300|gb|EFP40151.1| PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 3253
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|254363322|ref|ZP_04979368.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134148836|gb|EBA40881.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|379026477|dbj|BAL64210.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 3295
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|289760466|ref|ZP_06519844.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
gi|289707972|gb|EFD71988.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
Length = 2823
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|306774449|ref|ZP_07412786.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|306970553|ref|ZP_07483214.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
gi|308216954|gb|EFO76353.1| putative PPE family protein [Mycobacterium tuberculosis SUMu001]
gi|308359860|gb|EFP48711.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 3297
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2039 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2098
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2099 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2128
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2049 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2108
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2109 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2141
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2061 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2120
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2121 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2160
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2070 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2129
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2130 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2170
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2018 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2077
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2078 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2117
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1591 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1650
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1651 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1694
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2077 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2136
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2137 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2180
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1587 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1646
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1647 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1684
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2091 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2150
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2151 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2194
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1570 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1629
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1630 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1677
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1604 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1663
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1664 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1707
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2586 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2645
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2646 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2696
>gi|148821551|ref|YP_001286305.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|298523832|ref|ZP_07011241.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|148720078|gb|ABR04703.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|298493626|gb|EFI28920.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 3295
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2644 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2694
>gi|7478742|pir||D70575 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
Length = 3300
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 2607 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 2666
Query: 62 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 2667 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS 2707
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N G G N T GL N TG GL N TG +G+ N TGG G+
Sbjct: 2599 GFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDS 2658
Query: 64 GLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+G+ N+G +GL N TG +G+ N TG +G+ N T
Sbjct: 2659 QVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2699
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
>gi|300866933|ref|ZP_07111605.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
gi|300335037|emb|CBN56767.1| exported hypothetical protein [Oscillatoria sp. PCC 6506]
Length = 253
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 43/116 (37%), Gaps = 12/116 (10%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LRN N G LRN N G LR L N + G LR+ + LR+ N
Sbjct: 49 LRNANLQGADLRNANLRGANLRGAALRNADLSNADLRGADLRDADLSRSNLRNANLSDAN 108
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTRGLVAFTG 110
LRN + +R N G LR N GL RN N R V F
Sbjct: 109 LRNADLERAEVRGVNFQGTDLRGANVKDTGLPGDNRGRDNDRERNDNERVAVEFIS 164
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 37/95 (38%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
C+ LRN N G LRN N G LR L N + G LR + LRN
Sbjct: 42 CDLRDANLRNANLQGADLRNANLRGANLRGAALRNADLSNADLRGADLRDADLSRSNLRN 101
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
N LRN + +R N G LR N +
Sbjct: 102 ANLSDANLRNADLERAEVRGVNFQGTDLRGANVKD 136
>gi|289568216|ref|ZP_06448443.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289541969|gb|EFD45618.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 2199
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 1040 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 1099
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 1100 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 1141
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 193 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 252
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 253 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 294
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 1971 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 2030
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
NTG + NTG + NTGG + NTG L + NT VA TG G
Sbjct: 2031 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNTG--VANTGDVDTG 2083
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG + S N+G
Sbjct: 1420 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIEFGSFNSGS 1479
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 1480 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 1517
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 201 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 260
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 261 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 1009 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 1068
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 1069 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 1111
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 989 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 1048
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 1049 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 1086
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 1019 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 1078
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 1079 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 1126
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 1482 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 1541
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 1542 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 1592
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 1489 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 1548
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 1549 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 1607
>gi|148660121|ref|YP_001281644.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|307082838|ref|ZP_07491951.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|397672146|ref|YP_006513681.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|448824742|ref|YP_177721.2| PPE family protein PPE8 [Mycobacterium tuberculosis H37Rv]
gi|148504273|gb|ABQ72082.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|308367432|gb|EFP56283.1| PPE family protein [Mycobacterium tuberculosis SUMu012]
gi|395137051|gb|AFN48210.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444893831|emb|CCP43085.1| PPE family protein PPE8 [Mycobacterium tuberculosis H37Rv]
Length = 3300
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2589 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2648
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2649 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2699
>gi|385993407|ref|YP_005911705.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339293361|gb|AEJ45472.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 444
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N G +G N TG G+ N TG G+ N + GL +
Sbjct: 262 GIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDG 321
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTGG N NTG + NTGG N NTG N NT
Sbjct: 322 NTGGFNPGNFNTGNFNTGSFNTGGFNAGNTNTGHFNTGNYNT 363
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 5 LGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G+ N + +G N N G+GL G+G N +G +GL N G +G + T
Sbjct: 231 IGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGT 290
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N TG G+ N + GL N NTGG N NT
Sbjct: 291 GNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNT 333
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+G N LG N + +G+ N + +G N + +G+ TG +G+ + N+G
Sbjct: 211 IGFGNFGDDNLGFANLGSYNIGVANTGSNNIGFANTGSNNIGIGLTGTGQIGIGALNSGS 270
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG G+ N TG G+ N
Sbjct: 271 GNIGLFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNS 308
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + +G+ TG +G+ N+G +GL N G +G N TG G+ + T
Sbjct: 241 IGFANTGSNNIGIGLTGTGQIGIGALNSGSGNIGLFNSGDGNIGFFNSGTGNFGIGNTGT 300
Query: 63 GGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G G+ N + GL N NTGG N NTG + NT G A
Sbjct: 301 GNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTGSFNTGGFNA 348
>gi|449266205|gb|EMC77290.1| hypothetical protein A306_15531, partial [Columba livia]
Length = 199
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------NTGGLGLRNCNTGGLG 56
G G+R+ G G+R+ G G+ N T G G+R+ T G G+R T G
Sbjct: 64 GHGVRDGQMYGHGVRDGQMDGHGVGNGQTDGHGVRDRRMDMGDGRTDGHGVREGQTDGHR 123
Query: 57 LRSCNTGGLGLRNCNTGGL-----GLRNCNTG--GLGLRNCNTGGLGLRNCNTRGLVAFT 109
+R T G G+R+ T G GL + +G G G+R+ T G G+R T G
Sbjct: 124 VREGQTDGHGVRDGQTDGQRSGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHRVRE 183
Query: 110 GPT 112
G T
Sbjct: 184 GQT 186
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 52/116 (44%), Gaps = 14/116 (12%)
Query: 4 GLGLRNCNTGGLGLRNCN-------TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL- 55
G G+ N T G G+R+ T G G+R T G +R T G G+R+ T G
Sbjct: 84 GHGVGNGQTDGHGVRDRRMDMGDGRTDGHGVREGQTDGHRVREGQTDGHGVRDGQTDGQR 143
Query: 56 ----GLRSCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL +G G G+R+ T G G+R T G +R T G G+R T G
Sbjct: 144 SGVDGLTDSGSGMDGHGVRDGRTDGHGVREGQTDGHRVREGQTDGHGVREGQTDGQ 199
>gi|433628495|ref|YP_007262124.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
gi|432156101|emb|CCK53354.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
Length = 3719
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G GL N G +GL N TG G+GL G+G N TG LGL +
Sbjct: 2031 GNVGLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNS 2090
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N T GL N
Sbjct: 2091 GTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNA 2130
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1480 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPG 1539
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG N NTG + NTG
Sbjct: 1540 SYNTGSFNVGDTNTGGFNPGNINTGWFNTGHANTG 1574
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2082 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2141
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2142 SYNTGSLNVGSFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNT 2185
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRNC--NTGG-----LGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
+G LG N G LG N TG +GL N +G GL N G +GL N TG
Sbjct: 2003 TGNLGFGNIGAGNLGFGNAGLTTGAAGLGNVGLANAGSGNWGLANVGVGNIGLANTGTGN 2062
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2063 IGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N T +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2679 AGNIGLFNSGTANIGFFNSGTGNFGIGNSGSYNTGIGNSGTGSTGLFNAGSFNTGVANPG 2738
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
S NTG + NTGG N NTG + NT G+ N T G AF
Sbjct: 2739 SYNTGSFNAGDTNTGGFNPGNVNTGWFNTGHTNT---GIANSGTVGTGAF 2785
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2040 SGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2158
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N +G GL N G +GL N TG G+GL G+G + TG LGL N
Sbjct: 2031 GNVGLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNS 2090
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 2091 GTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 2074 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 2133
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 2134 NTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNTGHTNT 2175
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N T GL +
Sbjct: 1472 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNF 1531
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG N NTG + NT
Sbjct: 1532 NTGIANPGSYNTGSFNVGDTNTGGFNPGNINTGWFNTGHANT 1573
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL + G+G N +G +GL +
Sbjct: 1429 GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNS 1488
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N T GL N
Sbjct: 1489 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNA 1528
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRNCNT-------GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
SG +G N G +G N G +GL N + GL N G +GL N TG
Sbjct: 1401 SGNVGFGNIGAGNVGFANSGPAVGLAGLGNVGLGNAGSNNWGLANLGVGNIGLANTGTGN 1460
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N +G +GL N TG +G N TG GL N
Sbjct: 1461 IGIGLVGDHQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1508
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2064 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2124 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINT 2165
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVANVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL + G+G N +G +GL N TG +G N TG GL +
Sbjct: 1449 GNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1508
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG + + NTGG N NT
Sbjct: 1509 GSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGNINT 1563
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N T +G N TG G+ N + G+ + TG
Sbjct: 2661 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTANIGFFNSGTGNFGIGNSGSYNTGIGNSGTG 2720
Query: 64 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG N NT
Sbjct: 2721 STGLFNAGSFNTGVANPGSYNTGSFNAGDTNTGGFNPGNVNT 2762
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2092 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2151
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2152 SFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDRHGLVGF 2209
Query: 109 T 109
+
Sbjct: 2210 S 2210
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL + G+G + +G +GL N
Sbjct: 1429 GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNS 1488
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 1489 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTS 1521
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 35 LGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 92
GL N G +GL N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 3227 WGLANVGVGNIGLANTGTGNIGIGLTGDHQTGIGGLNSGAGNIGLFNSGTGNVGFFNTGT 3286
Query: 93 GGLGLRNC 100
G GL N
Sbjct: 3287 GNFGLFNS 3294
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------- 50
G+GL + G+G N G +GL N TG +G N TG GL N
Sbjct: 3248 GIGLTGDHQTGIGGLNSGAGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNGGTG 3307
Query: 51 ----------NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
NTG S NTG + NTGG + NTG L + NTG N
Sbjct: 3308 STGLFNAGSFNTGLANAGSYNTGSFNAGDTNTGGFNPGSINTGWLNTGHANTGVANAGNV 3367
Query: 101 NTRGLV 106
NT V
Sbjct: 3368 NTGAFV 3373
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N + G+ N G+ N + G+
Sbjct: 897 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGSFNTGIGNSGVASTGVFNAGSFSTGIANTGD 956
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 957 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 1002
>gi|340628332|ref|YP_004746784.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006522|emb|CCC45707.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 3719
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G GL N G +GL N TG G+GL G+G N TG LGL +
Sbjct: 2031 GNVGLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNS 2090
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N T GL N
Sbjct: 2091 GTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNA 2130
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1480 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNFNTGIANPG 1539
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG N NTG + NTG
Sbjct: 1540 SYNTGSFNVGDTNTGGFNPGNINTGWFNTGHANTG 1574
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2082 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2141
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2142 SYNTGSLNVGSFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNT 2185
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 51/108 (47%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRNC--NTGG-----LGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
+G LG N G LG N TG +GL N +G GL N G +GL N TG
Sbjct: 2003 TGNLGFGNIGAGNLGFGNAGLTTGAAGLGNVGLANAGSGNWGLANVGVGNIGLANTGTGN 2062
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2063 IGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N T +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2679 AGNIGLFNSGTANIGFFNSGTGNFGIGNSGSYNTGIGNSGTGSTGLFNAGSFNTGVANPG 2738
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
S NTG + NTGG N NTG + NT G+ N T G AF
Sbjct: 2739 SYNTGSFNAGDTNTGGFNPGNVNTGWFNTGHTNT---GIANSGTVGTGAF 2785
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2040 SGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2158
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVANVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N +G GL N G +GL N TG G+GL G+G + TG LGL N
Sbjct: 2031 GNVGLANAGSGNWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNS 2090
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 2091 GTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 2074 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 2133
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 2134 NTGLANAGSYNTGSLNVGSFNTGGVNPGTINTGWFNTGHTNT 2175
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N T GL +
Sbjct: 1472 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNAGNF 1531
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTGG N NTG + NT
Sbjct: 1532 NTGIANPGSYNTGSFNVGDTNTGGFNPGNINTGWFNTGHANT 1573
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL + G+G N +G +GL +
Sbjct: 1429 GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNS 1488
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N T GL N
Sbjct: 1489 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTSSTGLFNA 1528
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRNCNT-------GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
SG +G N G +G N G +GL N + GL N G +GL N TG
Sbjct: 1401 SGNVGFGNIGAGNVGFANSGPAVGLAGLGNVGLGNAGSNNWGLANLGVGNIGLANTGTGN 1460
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N +G +GL N TG +G N TG GL N
Sbjct: 1461 IGIGLVGDHQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1508
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2064 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2124 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTINT 2165
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVANVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL + G+G N +G +GL N TG +G N TG GL +
Sbjct: 1449 GNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1508
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG + + NTGG N NT
Sbjct: 1509 GSFNTGIGNSGTSSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGNINT 1563
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N T +G N TG G+ N + G+ + TG
Sbjct: 2661 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTANIGFFNSGTGNFGIGNSGSYNTGIGNSGTG 2720
Query: 64 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG N NT
Sbjct: 2721 STGLFNAGSFNTGVANPGSYNTGSFNAGDTNTGGFNPGNVNT 2762
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2092 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2151
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2152 SFNTGGVNPGTINTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDRHGLVGF 2209
Query: 109 T 109
+
Sbjct: 2210 S 2210
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL + G+G + +G +GL N
Sbjct: 1429 GNVGLGNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDHQTGIGGLNSGSGNIGLFNS 1488
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 1489 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTS 1521
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 35 LGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 92
GL N G +GL N TG G+GL + G+G N G +GL N TG +G N T
Sbjct: 3227 WGLANVGVGNIGLANTGTGNIGIGLTGDHQTGIGGLNSGAGNIGLFNSGTGNVGFFNTGT 3286
Query: 93 GGLGLRNC 100
G GL N
Sbjct: 3287 GNFGLFNS 3294
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 49/126 (38%), Gaps = 23/126 (18%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------- 50
G+GL + G+G N G +GL N TG +G N TG GL N
Sbjct: 3248 GIGLTGDHQTGIGGLNSGAGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNGGTG 3307
Query: 51 ----------NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
NTG S NTG + NTGG + NTG L + NTG N
Sbjct: 3308 STGLFNAGSFNTGLANAGSYNTGSFNAGDTNTGGFNPGSINTGWLNTGHANTGVANAGNV 3367
Query: 101 NTRGLV 106
NT V
Sbjct: 3368 NTGAFV 3373
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N + G+ N G+ N + G+
Sbjct: 897 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGSFNTGIGNSGVASTGVFNAGSFSTGIANTGD 956
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 957 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 1002
>gi|148680449|gb|EDL12396.1| mCG125898 [Mus musculus]
Length = 1705
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 39/94 (41%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L+ C G LR C G LR C G LR C G LR C G LR C G
Sbjct: 598 LQFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTV 657
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
LR C G LR C G LR C G LR C
Sbjct: 658 LRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 691
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 40/100 (40%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C G LR C
Sbjct: 430 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 489
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR C G LR C G LR C LR C
Sbjct: 490 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPVLTVLRLC 529
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 40/100 (40%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C G LR C
Sbjct: 440 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 499
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR C G LR C LR C G LR C
Sbjct: 500 MPGLTVLRLCMPGLTVLRLCMPVLTVLRLCMPGLTVLRLC 539
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 40/100 (40%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C G LR C
Sbjct: 450 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 509
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR C LR C G LR C G LR C
Sbjct: 510 MPGLTVLRLCMPVLTVLRLCMPGLTVLRLCMPGLTVLRLC 549
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 40/100 (40%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C G LR C
Sbjct: 460 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 519
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
LR C G LR C G LR C G LR C
Sbjct: 520 MPVLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 559
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 40/100 (40%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C LR C
Sbjct: 470 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPVLTVLRLC 529
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G LR C G LR C G LR C G LR C
Sbjct: 530 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 569
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 38/93 (40%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C G LR C
Sbjct: 602 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 661
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
G LR C G LR C G LR C G
Sbjct: 662 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPG 694
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 38/93 (40%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
+ C G LR C G LR C G LR C G LR C G LR C G L
Sbjct: 427 QFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVL 486
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
R C G LR C G LR C G LR C
Sbjct: 487 RLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 519
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
M G LR C G LR C G LR C G LR C G LR C G LR C
Sbjct: 632 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 691
Query: 61 NTG------GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G G + C G LR C G LR C G LR C
Sbjct: 692 MPGLTVLYAGSQFQFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 737
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS- 59
M G LR C G LR C G LR C G LR C G LR C G L +
Sbjct: 90 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAG 149
Query: 60 -----------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
C G + LR C G LR C G LR C G LR C
Sbjct: 150 SHSSVCRVSQFCMPGLIVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 201
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 42/112 (37%), Gaps = 12/112 (10%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLR 48
M G LR C G LR C G LR C G L + C G + LR
Sbjct: 110 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAGSHSSVCRVSQFCMPGLIVLR 169
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
C G LR C G LR C G LR C G LR C G LR C
Sbjct: 170 LCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLC 221
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG------G 54
M G LR C G LR C G LR C G LR C G LR C G G
Sbjct: 642 MPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLYAG 701
Query: 55 LGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
+ C G LR C G LR C G LR C G
Sbjct: 702 SQFQFCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPG 740
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 39/105 (37%), Gaps = 12/105 (11%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLR 48
M G LR C G LR C G L + C G + LR C G LR
Sbjct: 120 MPGLTVLRLCMPGLTVLRLCMPGLTVLYAGSHSSVCRVSQFCMPGLIVLRLCMPGLTVLR 179
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
C G LR C G LR C G LR C G LR C G
Sbjct: 180 LCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPGLTVLRLCMPG 224
>gi|377806122|gb|AFB75831.1| hypothetical protein 2200_scaffold1335_00051 [unidentified phage]
Length = 291
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
+NC TG NCNTG NCNTG NCNTG NCNTG +CNTG
Sbjct: 111 KNC-TGRWNTGNCNTG-----NCNTG-----NCNTGDCNTGNCNTG-----NCNTGNCNT 154
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQ 113
NCNTG NCNTG + NTG N + ++ F P+
Sbjct: 155 GNCNTGDWNTGNCNTGDWNKSSFNTGCF---NTEEQKIMLFNKPSD 197
>gi|119485304|ref|ZP_01619632.1| hypothetical protein L8106_09191 [Lyngbya sp. PCC 8106]
gi|119457060|gb|EAW38186.1| hypothetical protein L8106_09191 [Lyngbya sp. PCC 8106]
Length = 285
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 45/102 (44%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L + N G+ L N N G+ L N G L + N G+ L N N G+ L N
Sbjct: 94 GVNLNDTNFVGVNLSNTNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFF 153
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
G L + N G+ L N N G+ L N G L N G+
Sbjct: 154 GANLTDTNFVGVNLSNTNFAGVDLIRANFLGANLTESNFVGV 195
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 44/102 (43%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L N N G+ L N G L + N G+ L N N G+ L + N G L N
Sbjct: 104 GVNLSNTNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFV 163
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
G+ L N N G+ L N G L N G+ L N G+
Sbjct: 164 GVNLSNTNFAGVDLIRANFLGANLTESNFVGVNLSEANLTGV 205
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 44/99 (44%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L + N G+ L N N G+ L + N G L + N G+ L N N G+ L N G
Sbjct: 127 LTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSNTNFAGVDLIRANFLGAN 186
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L N G+ L N G+ L + N G+ L N G+
Sbjct: 187 LTESNFVGVNLSEANLTGVNLTDSNFIGVNLSKANLTGV 225
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 43/96 (44%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
N G+ L N G+ L + N G+ L N N G+ L N G L N G+ L N
Sbjct: 80 ANFAGVDLIGANFQGVNLNDTNFVGVNLSNTNFAGVDLIGANFFGSNLTDTNFVGVNLTN 139
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
N G+ L + N G L + N G+ L N N G+
Sbjct: 140 TNFAGVDLIDANFFGANLTDTNFVGVNLSNTNFAGV 175
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L + N G+ L N G+ L N G+ L + N G+ L N N G+ L N
Sbjct: 64 GVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSNTNFAGVDLIGANFF 123
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
G L + N G+ L N N G+ L + N G L + N G+
Sbjct: 124 GSNLTDTNFVGVNLTNTNFAGVDLIDANFFGANLTDTNFVGV 165
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 45/102 (44%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L N N G+ L + N G L + N G+ L N N G+ L N G L N
Sbjct: 134 GVNLTNTNFAGVDLIDANFFGANLTDTNFVGVNLSNTNFAGVDLIRANFLGANLTESNFV 193
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
G+ L N G+ L + N G+ L N G+ L N G+
Sbjct: 194 GVNLSEANLTGVNLTDSNFIGVNLSKANLTGVNLAGINLIGV 235
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 42/96 (43%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
N GL L N G+ L + N G+ L N G+ L N G+ L N G+ L N
Sbjct: 50 ANFAGLNLGGANFQGVNLSDTNFSGVNLGGANFAGVDLIGANFQGVNLNDTNFVGVNLSN 109
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
N G+ L N G L + N G+ L N N G+
Sbjct: 110 TNFAGVDLIGANFFGSNLTDTNFVGVNLTNTNFAGV 145
>gi|156408684|ref|XP_001641986.1| predicted protein [Nematostella vectensis]
gi|156229127|gb|EDO49923.1| predicted protein [Nematostella vectensis]
Length = 108
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 37/79 (46%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G G R+ G G R+ N G G R+ N G G R+ N G G R+ N G G R
Sbjct: 30 YDGPRGGRSAVYGPRGGRDANDGPRGGRDANDGPRGGRDANDGPRGGRDANEGPRGGRDA 89
Query: 61 NTGGLGLRNCNTGGLGLRN 79
N G G R+ N G G RN
Sbjct: 90 NEGPRGGRDANKGPRGGRN 108
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 37/78 (47%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCN 71
G G R+ G G R+ N G G R+ N G G R+ N G G R N G G R+ N
Sbjct: 31 DGPRGGRSAVYGPRGGRDANDGPRGGRDANDGPRGGRDANDGPRGGRDANEGPRGGRDAN 90
Query: 72 TGGLGLRNCNTGGLGLRN 89
G G R+ N G G RN
Sbjct: 91 EGPRGGRDANKGPRGGRN 108
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 37/78 (47%)
Query: 22 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCN 81
G G R+ G G R+ N G G R+ N G G R N G G R+ N G G R+ N
Sbjct: 31 DGPRGGRSAVYGPRGGRDANDGPRGGRDANDGPRGGRDANDGPRGGRDANEGPRGGRDAN 90
Query: 82 TGGLGLRNCNTGGLGLRN 99
G G R+ N G G RN
Sbjct: 91 EGPRGGRDANKGPRGGRN 108
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 33/71 (46%)
Query: 32 TGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 91
G G R+ G G R+ N G G R N G G R+ N G G R+ N G G R+ N
Sbjct: 31 DGPRGGRSAVYGPRGGRDANDGPRGGRDANDGPRGGRDANDGPRGGRDANEGPRGGRDAN 90
Query: 92 TGGLGLRNCNT 102
G G R+ N
Sbjct: 91 EGPRGGRDANK 101
>gi|260806097|ref|XP_002597921.1| hypothetical protein BRAFLDRAFT_141428 [Branchiostoma floridae]
gi|229283191|gb|EEN53933.1| hypothetical protein BRAFLDRAFT_141428 [Branchiostoma floridae]
Length = 193
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/89 (16%), Positives = 49/89 (55%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G +++C + G + +C + G ++ + G +++C + G +++C + G +++
Sbjct: 81 YSSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKAR 140
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRN 89
+ G +++ + G +++C++ G +++
Sbjct: 141 YSSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/88 (15%), Positives = 47/88 (53%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCN 71
+ G +++C + G + +C + G ++ + G +++C + G ++ C + G ++
Sbjct: 82 SSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKARY 141
Query: 72 TGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ G +++ + G +++C++ G +++
Sbjct: 142 SSGACIKDSYSSGACIKDCHSSGACIKD 169
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/83 (16%), Positives = 44/83 (53%)
Query: 22 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCN 81
+ G +++C + G + +C + G ++ + G ++ C + G +++C + G ++
Sbjct: 82 SSGACIKDCYSSGACITDCYSSGACIKARYSSGACIKDCYSSGACIKDCYSSGACIKARY 141
Query: 82 TGGLGLRNCNTGGLGLRNCNTRG 104
+ G +++ + G +++C++ G
Sbjct: 142 SSGACIKDSYSSGACIKDCHSSG 164
>gi|260800470|ref|XP_002595153.1| hypothetical protein BRAFLDRAFT_67948 [Branchiostoma floridae]
gi|229280395|gb|EEN51164.1| hypothetical protein BRAFLDRAFT_67948 [Branchiostoma floridae]
Length = 249
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 39/97 (40%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L +C+ + L +C+ + L +C + L +C+ + L C + L C+
Sbjct: 11 MALIHCHNTWMALIHCHNTCMALLHCQNTCMALIHCHNTRIALLQCQNTCMALLHCHNTW 70
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+ L +C + L C + L C + L C
Sbjct: 71 MTLLHCQNTWMTLLQCQNTCMALLQCQNTWMTLLQCQ 107
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 38/98 (38%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
+ L +C+ + L +C + L +C+ + L C + L +C+ + L C
Sbjct: 20 WMALIHCHNTCMALLHCQNTCMALIHCHNTRIALLQCQNTCMALLHCHNTWMTLLHCQNT 79
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
+ L C + L C + L C + L +C
Sbjct: 80 WMTLLQCQNTCMALLQCQNTWMTLLQCQNTCMALLHCQ 117
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L +C + L +C+ + L C + L +C+ + L +C + L C
Sbjct: 31 MALLHCQNTCMALIHCHNTRIALLQCQNTCMALLHCHNTWMTLLHCQNTWMTLLQCQNTC 90
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-NTRGLVAFTGPT 112
+ L C + L C + L +C + L C NT + ++ T
Sbjct: 91 MALLQCQNTWMTLLQCQNTCMALLHCQNTWMTLLQCQNTWMALIYSQNT 139
>gi|289568267|ref|ZP_06448494.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289542020|gb|EFD45669.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 771
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N T G+ N NTG L + NTG S N
Sbjct: 603 VGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 662
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG + NT
Sbjct: 663 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGDVNT 703
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 586 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGI 645
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 646 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 683
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG G+ N T G+ N NTG L NT
Sbjct: 594 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNT 653
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 654 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 693
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N T G+ N NTG L + NTG + NTGG +
Sbjct: 610 TGNVGIANSGTGNWGIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 669
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG + NTG + N LVA
Sbjct: 670 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGDVNTGAFDTGDFNNGFLVA 718
>gi|433629445|ref|YP_007263073.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070010]
gi|432161038|emb|CCK58373.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070010]
Length = 3508
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 44/90 (48%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + TG G+ N G
Sbjct: 2043 GIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFG 2102
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2103 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2132
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N NTG L + NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N TG G+ N G GL + TG
Sbjct: 2053 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTG 2112
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2113 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2145
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGF 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGSYNVGNTNTGNFNVGDTNT 774
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRS 59
+G G N T GL N TG GL N TG +G+ N TG G+GL N G+G +
Sbjct: 2603 AGNTGFFNSGTANTGLFNAGTGNTGLFNSGTGNVGIGNMGTGSFGIGLSGDNQVGIGGTN 2662
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+ +GL N TG +G N TG +G+ N TG G+ N
Sbjct: 2663 SGSFNIGLFNSGTGNIGFGNSGTGNVGIGNTGTGNTGIGNS 2703
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N TG G+ N G GL N TG GL + TG +
Sbjct: 2065 GLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNM 2124
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2125 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2164
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N TG G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2074 IGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2133
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2134 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2174
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2022 LGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2081
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N TG G+ N G GL N TG GL N T
Sbjct: 2082 GNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGT 2121
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N TG G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2081 TGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2140
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2141 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2184
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N NTG L + NTG L + NTG + NTG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNTGSYNTGSYNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N TG +G+ N TG G+ N GL N NTG L N NTG N
Sbjct: 1608 IGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLLNAGNVNTGVGNTGHYN 1667
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG + NT GL N NTG L + NTG + NT L+A
Sbjct: 1668 TGSFNAGSFNTAGLNPGNYNTGYLNTGSYNTGLANSGDVNTGALIA 1713
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
+G G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2091 TGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2150
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG + NTG + NTG + NTG + NT +
Sbjct: 2151 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2198
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2585 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNAGTGNTGLFNSGTGNVGIGNMGTG 2644
Query: 64 --GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+GL N G+G N + +GL N TG +G N T
Sbjct: 2645 SFGIGLSGDNQVGIGGTNSGSFNIGLFNSGTGNIGFGNSGT 2685
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1591 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGL 1650
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT GL N NT
Sbjct: 1651 LNAGNVNTGVGNTGHYNTGSFNAGSFNTAGLNPGNYNT 1688
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 57
+G +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG N NTGG + NTG L N NTG N NT +
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
>gi|340625385|ref|YP_004743837.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|433625450|ref|YP_007259079.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140060008]
gi|340003575|emb|CCC42696.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|432153056|emb|CCK50269.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140060008]
Length = 3507
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 44/90 (48%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + TG G+ N G
Sbjct: 2042 GIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N NTG L + NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N TG G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGF 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGSYNVGNTNTGNFNVGDTNT 774
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N TG G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N TG G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N TG G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGT 2120
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N TG G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N NTG L + NTG L + NTG + NTG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNTGSYNTGSYNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N TG +G+ N TG G+ N GL N NTG L N NTG N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLLNAGNVNTGVGNTGHYN 1666
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG + NT GL N NTG L + NTG + NT L+A
Sbjct: 1667 TGSFNAGSFNTAGLNPGNYNTGYLNTGSYNTGLANSGDVNTGALIA 1712
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
+G G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 TGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG + NTG + NTG + NTG + NT +
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT GL N NT
Sbjct: 1650 LNAGNVNTGVGNTGHYNTGSFNAGSFNTAGLNPGNYNT 1687
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N G+G N + +GL N TG +G+ N T
Sbjct: 2644 GFGVGLSGDNQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGT 2684
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 57
+G +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG N NTGG + NTG L N NTG N NT +
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
>gi|433640476|ref|YP_007286235.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070008]
gi|432157024|emb|CCK54295.1| Conserved protein of unknown function, PPE6/PPE7 family protein
[Mycobacterium canettii CIPT 140070008]
Length = 3507
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 44/90 (48%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + TG G+ N G
Sbjct: 2042 GIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG G+ N NTG L + NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGSYNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N TG G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG G+ N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGF 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGSYNVGNTNTGNFNVGDTNT 774
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N TG G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N TG G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGDNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N TG G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGT 2120
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N TG G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGTGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG G+ N NTG L + NTG L + NTG + NTG +
Sbjct: 701 TGNVGIANSGTGNWGIGNPGTENTGILNAGSYNTGFLNAGDFNTGFYNTGSYNTGSYNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 49/106 (46%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
+GL N TG +G+ N TG G+ N GL N NTG L N NTG N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGLLNAGNVNTGVGNTGHYN 1666
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG + NT GL N NTG L + NTG + NT L+A
Sbjct: 1667 TGSFNAGSFNTAGLNPGNYNTGYLNTGSYNTGLANSGDVNTGALIA 1712
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
+G G+ N G GL N TG GL N TG +G+ N NTGG + + NTG +
Sbjct: 2090 TGNTGIGNPGFGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVG 2149
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG + NTG + NTG + NTG + NT +
Sbjct: 2150 IANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIGNPGIDNTGLFNSGDINTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT GL N NT
Sbjct: 1650 LNAGNVNTGVGNTGHYNTGSFNAGSFNTAGLNPGNYNT 1687
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2584 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2643
Query: 64 GL--GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N G+G N + +GL N TG +G+ N T
Sbjct: 2644 GFGVGLSGDNQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGT 2684
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGL 57
+G +GL N TG +G+ N TG G+ N NTG + NTG NTG
Sbjct: 302 TGNIGLFNSGTGNVGIGNSGTGNWGIGNSGNSYNTGFGNSGDANTGFFNSGIANTGVGNA 361
Query: 58 RSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG N NTGG + NTG L N NTG N NT +
Sbjct: 362 GDYNTGSYNPGNSNTGGFNMGQYNTGYLNSGNYNTGLANSGNVNTGAFI 410
>gi|290972286|ref|XP_002668885.1| predicted protein [Naegleria gruberi]
gi|284082421|gb|EFC36141.1| predicted protein [Naegleria gruberi]
Length = 288
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-NTGGLGLRSCNTGGL 65
+CN + L +C+ + + C+ L N N R+C N L SCN
Sbjct: 6 FESCNFSSVNLSSCSLKKVLFKECDFNSANLSNSNLESAQFRSCRNFSAANLTSCNLKYA 65
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNC 90
NC+ + N N RNC
Sbjct: 66 CFENCDFQNIDFTNSNPENATFRNC 90
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 32/85 (37%), Gaps = 1/85 (1%)
Query: 17 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC-NTGGLGLRNCNTGGL 75
+CN + L +C+ + + C+ L N N RSC N L +CN
Sbjct: 6 FESCNFSSVNLSSCSLKKVLFKECDFNSANLSNSNLESAQFRSCRNFSAANLTSCNLKYA 65
Query: 76 GLRNCNTGGLGLRNCNTGGLGLRNC 100
NC+ + N N RNC
Sbjct: 66 CFENCDFQNIDFTNSNPENATFRNC 90
>gi|441166522|ref|ZP_20968750.1| pentapeptide repeat-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440615904|gb|ELQ79069.1| pentapeptide repeat-containing protein [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 388
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 5/106 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ R + G+ + GG LR + G LR+ + G GLR N G GL
Sbjct: 205 GIDFRRADLRGMNFERVDLGGADLREADLRGASLRDADLSGAGLREANLRGAGLVRARLA 264
Query: 64 GLGLRNCN-----TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L+ N LR+ N L + G L N RG
Sbjct: 265 KADLQEANLRDALLWFADLRDTNLQAADLTEADLEGADLTRANLRG 310
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 32/89 (35%), Gaps = 5/89 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG LR + G LR+ + G GLR N G GL L+ N LR
Sbjct: 224 GGADLREADLRGASLRDADLSGAGLREANLRGAGLVRARLAKADLQEAN-----LRDALL 278
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 91
LR+ N L + G L N
Sbjct: 279 WFADLRDTNLQAADLTEADLEGADLTRAN 307
>gi|385989862|ref|YP_005908160.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339297055|gb|AEJ49165.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3248
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG + N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG + N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG + N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG + N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2537 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2596
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2597 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2647
>gi|294995112|ref|ZP_06800803.1| PPE family protein [Mycobacterium tuberculosis 210]
gi|385993456|ref|YP_005911754.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|424802905|ref|ZP_18228336.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326902181|gb|EGE49114.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|339293410|gb|AEJ45521.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 3243
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG + N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG + N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG + N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG + N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 2532 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 2591
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 2592 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 2642
>gi|289756421|ref|ZP_06515799.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289711985|gb|EFD75997.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 2568
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCN 61
+G+ N TG +G+ N TG + N T G+ N NTG L + NTG S N
Sbjct: 694 VGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYN 753
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + N NTG + + NTG + NTG N NT
Sbjct: 754 TGGFNVGNTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNT 794
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 2042 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 2101
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 2102 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 2131
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N TG GL N T +G+ N TG +G+ N TG + N NTG L S NTG
Sbjct: 677 WNSGTGNSGLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGI 736
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L + NTG + NTGG + N NTG + + NT
Sbjct: 737 LNAGDFNTGFYNTGSYNTGGFNVGNTNTGNFNVGDTNT 774
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 2052 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 2111
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 2112 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 2144
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNT 62
GL N T +G+ N TG +G+ N TG + N T G+ N NTG L NT
Sbjct: 685 GLFNSGTNNVGIFNAGTGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNT 744
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G + NTGG + N NTG + + NTG + NT
Sbjct: 745 GFYNTGSYNTGGFNVGNTNTGNFNVGDTNTGSYNPGDTNT 784
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 2064 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 2123
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 2124 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 2163
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
+G +G+ N TG + N T G+ N NTG L + NTG + NTGG +
Sbjct: 701 TGNVGIANSGTGNWDIGNPGTDNTGILNAGSYNTGILNAGDFNTGFYNTGSYNTGGFNVG 760
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG + + NTG + NTG N NTG + N LVA
Sbjct: 761 NTNTGNFNVGDTNTGSYNPGDTNTGFFNPGNVNTGAFDTGDFNNGFLVA 809
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 2073 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 2132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 2133 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 2173
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 2021 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 2080
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 2081 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 2120
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 1594 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 1653
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 1654 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 1697
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 2080 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 2140 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 2183
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 1590 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 1649
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 1650 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 1687
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 2094 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 2153
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 2154 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 2197
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 1573 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 1632
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 1633 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 1680
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 1607 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 1666
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 1667 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 1710
>gi|289752058|ref|ZP_06511436.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692645|gb|EFD60074.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 2714
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1957 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2016
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2017 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2060
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 189 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 248
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 249 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 297
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1358 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1417
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1418 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1452
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1915 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1974
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 1975 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2033
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1307 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1366
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1367 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1406
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1350 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1409
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1410 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1454
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 1949 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 2008
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 2009 NTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNT 2050
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 2551 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 2610
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 2611 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 2645
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 181 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 240
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 241 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 282
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1939 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 1998
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 1999 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2040
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1871 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1930
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1931 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 1985
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1327 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1386
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1387 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1441
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 2543 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 2602
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 2603 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 2644
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 2533 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 2592
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 2593 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 2634
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 1967 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2026
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2027 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2084
Query: 109 T 109
+
Sbjct: 2085 S 2085
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 2522 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 2581
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 2582 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 2627
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1307 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1366
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1367 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1398
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 692 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 751
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 752 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 799
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S G N +GL N TG G+GL N G+G N G +GL N TG +G +
Sbjct: 2509 SANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFN 2568
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG G+ N + G+ N TG GL N + G+ N
Sbjct: 2569 SGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANA 2609
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 44/97 (45%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + G N +GL N TG G+GL N G+G N G +GL + TG
Sbjct: 2503 GFGNAGSANYGFANQGVRNIGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTG 2562
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N + G+ N TG GL N
Sbjct: 2563 NIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNA 2599
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N + G N G +G N N G+GL + G+G N TG +GL + T
Sbjct: 140 IGLGNAGSSNYGFANLGVGNIGFDNTGTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGT 199
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N G+ N T GL N
Sbjct: 200 GNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNA 237
>gi|289576082|ref|ZP_06456309.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289540513|gb|EFD45091.1| predicted protein [Mycobacterium tuberculosis K85]
Length = 2053
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1868 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 1927
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 1928 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 1971
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 100 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 159
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 160 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 208
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1269 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1328
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1329 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1363
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1826 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1885
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 1886 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 1944
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1218 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1277
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1278 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1317
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1261 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1320
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1321 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1365
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 1860 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 1919
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 1920 NTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNT 1961
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 92 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 151
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 152 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 193
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1850 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 1909
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 1910 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 1951
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1782 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1841
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1842 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 1896
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1238 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1297
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1298 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1352
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 683 GNIGLFNSGTGDVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 742
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 743 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 788
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1218 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1277
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1278 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1309
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 603 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 662
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 663 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGTGNFGIGNS 710
>gi|289444992|ref|ZP_06434736.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417911|gb|EFD15151.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 2671
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2082 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 2141
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 2142 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 2185
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1483 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1542
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1543 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 2040 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 2099
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 2100 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 2158
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1531
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1475 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1534
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1535 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1579
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 2064 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 2123
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 2124 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 2165
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1996 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 2055
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 2056 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 2110
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1452 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1511
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1512 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1566
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 2092 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 2151
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 2152 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 2209
Query: 109 T 109
+
Sbjct: 2210 S 2210
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1523
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 897 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 956
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 957 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 1002
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
>gi|449065464|ref|YP_007432547.1| PPE family protein [second part] [Mycobacterium bovis BCG str. Korea
1168P]
gi|449033972|gb|AGE69399.1| PPE family protein [second part] [Mycobacterium bovis BCG str. Korea
1168P]
Length = 2044
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 1628 TGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAG 1687
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTGG+ NTG + NTG N NT
Sbjct: 1688 SYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNT 1731
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1029 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1088
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1089 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1123
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGL------------RNCNTGGLGLRNCNTGGLGLRN 49
SG GL N G +GL N TG +G+ N TG LGL N TG +G N
Sbjct: 1586 SGSWGLANVGVGNIGLANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFN 1645
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
TG GL + + G+ N T GL N GL N NTG L + + NT G+
Sbjct: 1646 TGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGV 1704
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 978 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1037
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1038 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1077
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1021 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1080
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1081 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1125
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N TG LGL N TG +G N TG GL N + G+ N T GL +
Sbjct: 1620 GIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNF 1679
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG L + + NTGG+ NTG + NT
Sbjct: 1680 NTGLANAGSYNTGSLNVGSFNTGGVNPGTVNTGWFNTGHTNT 1721
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G+G N TG LGL N TG +G N TG GL N + G+ + T
Sbjct: 1610 GIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTA 1669
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG L + + NTGG+ NT
Sbjct: 1670 STGLFNAGNFNTGLANAGSYNTGSLNVGSFNTGGVNPGTVNT 1711
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 19/115 (16%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-----------------CNTGGLGLRNCNTGGLGL 47
LGL N TG LG N G G N +G GL N G +GL
Sbjct: 1542 LGLGNVGTGNLGFGNIGAGNFGFGNAGLTAGAGGLGNVGLGNAGSGSWGLANVGVGNIGL 1601
Query: 48 RNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
N TG G+GL G+G N TG LGL N TG +G N TG GL N
Sbjct: 1602 ANTGTGNIGIGLTGDYRTGIGGLNSGTGNLGLFNSGTGNIGFFNTGTGNFGLFNS 1656
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 998 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1057
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1058 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1112
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N T GL N NTG L +
Sbjct: 1638 TGNIGFFNTGTGNFGLFNSGSYSTGVGNAGTASTGLFNAGNFNTGLANAGSYNTGSLNVG 1697
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG+ + NTG + NTG N NTG + N G L + GLV F
Sbjct: 1698 SFNTGGVNPGTVNTGWFNTGHTNTGLFNTGNVNTGAFNSGSFNNG--ALWTGDYHGLVGF 1755
Query: 109 T 109
+
Sbjct: 1756 S 1756
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 443 GNIGLFNSGTGDVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 502
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 503 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 548
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 363 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 422
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 423 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGDVGFFNSGTGNFGIGNS 470
>gi|433636452|ref|YP_007270079.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432168045|emb|CCK65569.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 3139
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 49/108 (45%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N T GL N NTG
Sbjct: 2686 AGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANAG 2745
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG N NTG L + NTG L + NTG N NT +
Sbjct: 2746 SYNTGSFNAGNTNTGDLNPGSINTGWLNTGHSNTGIANAGNVNTGAFI 2793
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG GL N + G+ N T GL N NTG +
Sbjct: 2093 AGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANVG 2152
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG N NTG + + NTG L + NTG
Sbjct: 2153 SHNTGSFNPGNTNTGDVNPGHTNTGWLNTGHANTG 2187
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 16 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRSCNTGGLGLRNCNTG 73
GLR G +GL N + +GL N G +GL N N G+GL N G G N G
Sbjct: 2628 GLRALGVGNIGLGNAGSNNVGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGAG 2687
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N TG +G N TG GL N
Sbjct: 2688 NIGLFNSGTGNVGFFNTGTGNFGLFNS 2714
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +GL N N G+GL N G G N G +GL +
Sbjct: 2635 GNIGLGNAGSNNVGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGAGNIGLFNS 2694
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N T GL N
Sbjct: 2695 GTGNVGFFNTGTGNFGLFNSGSYNTGIGNAGTASTGLFNA 2734
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + +GL N G +GL N N G+GL N G+G N G LGL +
Sbjct: 2042 GNIGFGNAGSNNIGLANLGVGNIGLANTGTNNVGIGLTGDNLSGIGGLNSGAGNLGLFNS 2101
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N T GL N
Sbjct: 2102 GTGNVGFFNSGTGNWGLFNSGSYNTGIGNAGTASTGLFNA 2141
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRSCNTG 63
GLR G +GL N + +GL N G +GL N N G+GL N G G + G
Sbjct: 2628 GLRALGVGNIGLGNAGSNNVGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGAG 2687
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG GL N + G+ N T
Sbjct: 2688 NIGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNAGTA 2727
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRSCNT 62
+G N G LG+ N +G N + +GL N G +GL N N G+GL N
Sbjct: 2029 VGFANSGLGALGVGN-----IGFGNAGSNNIGLANLGVGNIGLANTGTNNVGIGLTGDNL 2083
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+G N G LGL N TG +G N TG GL N
Sbjct: 2084 SGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNS 2121
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N G +GL N N G+GL N G+G N G LGL N TG +G + T
Sbjct: 2054 IGLANLGVGNIGLANTGTNNVGIGLTGDNLSGIGGLNSGAGNLGLFNSGTGNVGFFNSGT 2113
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G GL N + G+ N T GL N G+ N +
Sbjct: 2114 GNWGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANVGSH 2154
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N G+ N T GL N NTG
Sbjct: 888 AGNIGLFNSGTGNVGFFNTGTGNWGLFNSGVYNTGVGNSGTASTGLFNAGGFNTGVANTG 947
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S N+G + NTGG+ + NTG NTG NT +
Sbjct: 948 SYNSGSFNAGDTNTGGVNPGSVNTGWFNTGYANTGVFNSGTVNTGAFI 995
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G LGL N TG +G N TG GL N + G+ N T GL
Sbjct: 2085 GIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNSGSYNTGIGNAGTASTGLFNAGDF 2144
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG N NTG + + NTG L + NT
Sbjct: 2145 NTGVANVGSHNTGSFNPGNTNTGDVNPGHTNTGWLNTGHANT 2186
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N T LG N G +G N N G+GL N G+G N G +GL +
Sbjct: 257 GNVGLGNAGTNNLGFANTGVGNIGFANSGNNNFGIGLTGNNQAGIGGLNSGAGNIGLFNS 316
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N G GL N + G+ N T G N
Sbjct: 317 GTGNVGFFNTGIGNFGLFNSGSYNTGIGNAGTASTGFFNV 356
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N G +GL N N G+GL N G G N G +GL N TG +G + T
Sbjct: 2647 VGLANMGAGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGAGNIGLFNSGTGNVGFFNTGT 2706
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N T GL N G+ N
Sbjct: 2707 GNFGLFNSGSYNTGIGNAGTASTGLFNAGDFNTGVANA 2744
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 53/131 (40%), Gaps = 25/131 (19%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------------NTGGL--GLRNC- 40
+G LGL N TG +G+ N TG GL N N GG G+ N
Sbjct: 1500 AGNLGLFNSGTGNIGIFNTGTGNWGLFNSGDYNTGIGNGGTGSTGFFNAGGFNTGVANAG 1559
Query: 41 --NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
NTG N NTGG+ S NTG + NTG N NTG + N G L
Sbjct: 1560 SYNTGSFNAGNTNTGGVNPGSINTGWFNAGHTNTGTFNTGNVNTGAFNSGSLNNG--ALW 1617
Query: 99 NCNTRGLVAFT 109
+ GL F+
Sbjct: 1618 TGDYHGLFGFS 1628
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 3 GGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N N G+GL N G+G N G LGL N TG +G N TG GL +
Sbjct: 2062 GNIGLANTGTNNVGIGLTGDNLSGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNWGLFNS 2121
Query: 61 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG + + NTG N NT
Sbjct: 2122 GSYNTGIGNAGTASTGLFNAGDFNTGVANVGSHNTGSFNPGNTNT 2166
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G+ N G +GL N N G+GL N G+G N G +GL +
Sbjct: 837 GNVGLGNAGVNNVGVANLGVGNVGLANTGNNNFGIGLTGDNLSGVGGLNSGAGNIGLFNS 896
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N G+ N T GL N
Sbjct: 897 GTGNVGFFNTGTGNWGLFNSGVYNTGVGNSGTASTGLFNA 936
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 48/106 (45%), Gaps = 5/106 (4%)
Query: 2 SGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
+G +GL N N G+GL N G G N G +GL N TG +G N TG GL +
Sbjct: 2654 AGNIGLANTGTNNVGIGLTGDNLSGFGGLNSGAGNIGLFNSGTGNVGFFNTGTGNFGLFN 2713
Query: 60 CNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N T GL N NTG + NTG N NT
Sbjct: 2714 SGSYNTGIGNAGTASTGLFNAGDFNTGVANAGSYNTGSFNAGNTNT 2759
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N G GL N + G+ N T G N NTG
Sbjct: 308 AGNIGLFNSGTGNVGFFNTGIGNFGLFNSGSYNTGIGNAGTASTGFFNVGNFNTGVANTG 367
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTG + NTG + NTG
Sbjct: 368 SYNTGSFNAGSTNTGDFNPGSVNTGWFNTGSINTG 402
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
G +G N + +GL N G +GL N N G+GL N G+G + G LGL N
Sbjct: 2041 VGNIGFGNAGSNNIGLANLGVGNIGLANTGTNNVGIGLTGDNLSGIGGLNSGAGNLGLFN 2100
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 2101 SGTGNVGFFNSGTGNWGLFNSGSYNTGIGNAGTA 2134
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 22 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRSCNTGGLGLRNCNTGGLGLRN 79
G +GL N +G+ N G +GL N N G+GL N G+G N G +GL N
Sbjct: 836 VGNVGLGNAGVNNVGVANLGVGNVGLANTGNNNFGIGLTGDNLSGVGGLNSGAGNIGLFN 895
Query: 80 CNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N
Sbjct: 896 SGTGNVGFFNTGTGNWGLFNS 916
>gi|121639277|ref|YP_979501.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991774|ref|YP_002646463.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378773138|ref|YP_005172871.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449065465|ref|YP_007432548.1| PPE family protein [first part] [Mycobacterium bovis BCG str. Korea
1168P]
gi|121494925|emb|CAL73411.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774889|dbj|BAH27695.1| PPE Family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603302|emb|CCC65983.1| PPE Family protein [first part] [Mycobacterium bovis BCG str.
Moreau RDJ]
gi|356595459|gb|AET20688.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449033973|gb|AGE69400.1| PPE family protein [first part] [Mycobacterium bovis BCG str. Korea
1168P]
Length = 432
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 312 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 371
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 372 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 420
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 304 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 363
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 364 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 405
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N + G N G +G N N G+GL + G+G N TG +GL + TG
Sbjct: 265 IGLGNAGSSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGN 324
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N TG G+ N G+ N T GL N
Sbjct: 325 VGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNA 360
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
S G N G +G N N G+GL + G+G N TG +GL N TG +G +
Sbjct: 272 SSNYGFANLGVGNIGFGNTNNVGVGLTGNHLTGIGGLNSGTGNIGLFNSGTGNVGFFNSG 331
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
TG G+ N G+ N T GL N NTG + + + NT
Sbjct: 332 TGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVGSYNT 375
>gi|31794533|ref|NP_857026.1| hypothetical protein Mb3385c [Mycobacterium bovis AF2122/97]
gi|31620129|emb|CAD95525.1| PPE FAMILY PROTEIN [FIRST PART] [Mycobacterium bovis AF2122/97]
Length = 434
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
>gi|408829786|ref|ZP_11214676.1| lipoprotein (VslE) [Streptomyces somaliensis DSM 40738]
Length = 854
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 31/102 (30%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+G R TG R TG R TG R TG R TG R
Sbjct: 42 ETGPRSRRGAETGPRSRRGAETGPRPRRGAETGPRPRRGAETGPRPRRGAETGPRPRRGA 101
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG R TG R TG R TG R T
Sbjct: 102 ETGPRPRRGAETGPRPRRGAETGPRPRRGAETGPRPRRGAET 143
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 35/114 (30%), Gaps = 6/114 (5%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+G R TG R TG R TG R TG R TG R
Sbjct: 52 ETGPRSRRGAETGPRPRRGAETGPRPRRGAETGPRPRRGAETGPRPRRGAETGPRPRRGA 111
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT-RG-----LVAF 108
TG R TG R TG R TG R RG VAF
Sbjct: 112 ETGPRPRRGAETGPRPRRGAETGPRPRRGAETGPRPRRERKQGRGRGGSPPVAF 165
>gi|308377402|ref|ZP_07668505.1| hypothetical protein TMIG_01245 [Mycobacterium tuberculosis SUMu009]
gi|308355902|gb|EFP44753.1| hypothetical protein TMIG_01245 [Mycobacterium tuberculosis SUMu009]
Length = 2388
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 43/90 (47%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G G N T GL N T +GL N TG +G+ + G G+ N G
Sbjct: 1177 GIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVG 1236
Query: 74 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
GL N TG GL N TG +G+ N T
Sbjct: 1237 NTGLGNSGTGNWGLWNPGTGNMGVANVGTY 1266
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G G N T GL N T +GL N TG +G+ N G G+ N G GL + TG
Sbjct: 1187 GFGSWNSGTANTGLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTG 1246
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTG 93
GL N TG +G+ N NTGG + + NTG
Sbjct: 1247 NWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTG 1279
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
GL N T +GL N TG +G+ N G G+ N G GL N TG GL + TG +
Sbjct: 1199 GLFNSGTNNIGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNM 1258
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G+ N NTGG + + NTG + NTG + NT
Sbjct: 1259 GVANVGTYNTGGYNVGSTNTGIANVGIANTGSYNTGSTNT 1298
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SCN 61
+GL N TG +G+ N G G+ N G GL N TG GL N TG +G+ + N
Sbjct: 1208 IGLFNSGTGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYN 1267
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG + + NTG + NTG + NTG + NT
Sbjct: 1268 TGGYNVGSTNTGIANVGIANTGSYNTGSTNTGSFNDGDFNT 1308
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
LG N + +G N N G+GL N G G N T GL N T +GL + T
Sbjct: 1156 LGFANSGSNNIGFANTGNNNIGIGLSGHNQQGFGSWNSGTANTGLFNSGTNNIGLFNSGT 1215
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G +G+ N G G+ N G GL N TG GL N T
Sbjct: 1216 GNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGT 1255
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG GL N T +GL N TG +G+ N TG G+ N NTG + NTG L
Sbjct: 729 SGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAG 788
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+ NTG + NTG + NT G + NTG L + NT
Sbjct: 789 NVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNTGYLNTGSYNT 832
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +G+ N G G+ N G GL N TG GL N TG +G+ N NTGG +
Sbjct: 1215 TGNIGIGNSGIGNTGIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVG 1274
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG + NTG + NTG + NTG + NT
Sbjct: 1275 STNTGIANVGIANTGSYNTGSTNTGSFNDGDFNTGFYNTGDYNT 1318
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNT 62
G+ N G GL N TG GL N TG +G+ N NTGG + + NTG + NT
Sbjct: 1229 GIGNPGVGNTGLGNSGTGNWGLWNPGTGNMGVANVGTYNTGGYNVGSTNTGIANVGIANT 1288
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
G + NTG + NTG + NTG + NT +
Sbjct: 1289 GSYNTGSTNTGSFNDGDFNTGFYNTGDYNTGFYNTGDVNTGAFI 1332
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTGG 64
N +G GL N T +GL N TG +G+ N TG G+ N NTG NTG
Sbjct: 725 WNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGL 784
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L N NTG + NTG + NT G + NT
Sbjct: 785 LNAGNVNTGIFNTGHYNTGSFNAGSFNTAGFNPGSYNT 822
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 4 GLGLRNCNTGGLGL---RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR-- 58
G+GL N G N +G GL N T +GL N TG +G+ N TG G+
Sbjct: 708 GIGLSGDNQQGFNFAGGWNSGSGNSGLFNSGTNNIGLFNSGTGNIGIGNSGTGNWGIANT 767
Query: 59 -SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG + NTG L N NTG + NTG + NT G
Sbjct: 768 GDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYNTGSFNAGSFNTAGF 815
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 13/104 (12%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRN-------------CNTGGLGLRNCNTGGLGLRNCN 51
+GL N TG +G+ N TG G+ N NTG L N NTG + N
Sbjct: 742 IGLFNSGTGNIGIGNSGTGNWGIANTGDTNTGIFNTGDVNTGLLNAGNVNTGIFNTGHYN 801
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TG S NT G + NTG L + NTG + NTGG
Sbjct: 802 TGSFNAGSFNTAGFNPGSYNTGYLNTGSYNTGLANSGDVNTGGF 845
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G N G G N T GL N TG GL N TG +G+ + TG
Sbjct: 1719 GIGLTGDGLSGFSSLNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTG 1778
Query: 64 GLGL------------RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G G+ N + +GL N TG +G+ N TG +G+ N T
Sbjct: 1779 GFGVGLSGDSQVGIGGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 1829
>gi|380012367|ref|XP_003690256.1| PREDICTED: uncharacterized protein LOC100865644 [Apis florea]
Length = 1575
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
G G R N G R + G G R N G G + N G G R N LGL+ N
Sbjct: 1046 DGQFGPRGSNNGQFAPRGPD-GQFGPRGGNDGIFGSKGSNDGLFGPRVDNQ--LGLKPPN 1102
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
G R+ N G G R G L LR N G GL+ N R V
Sbjct: 1103 NVQFGPRSSNIGQFGPRY--DGQLDLRRPNDGQFGLQGLNNRPFVP 1146
>gi|146092981|ref|XP_001466602.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070965|emb|CAM69641.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 698
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 23/54 (42%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 74 GGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFG 127
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 23/54 (42%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLG 76
GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 74 GGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFG 127
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 23/54 (42%)
Query: 43 GGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
GG G TGG G TGG G TGG G TGG G TGG G
Sbjct: 74 GGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFGAAPAPTGGFG 127
>gi|289747171|ref|ZP_06506549.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687699|gb|EFD55187.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 2137
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 385 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 444
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 445 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 493
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1554 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1613
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1614 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1648
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1602
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1546 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1605
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1606 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1650
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 377 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 436
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 437 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 478
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1523 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1582
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1583 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1637
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1503 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1562
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1563 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1594
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 968 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 1027
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 1028 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 1073
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 888 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 947
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 948 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 995
>gi|424948987|ref|ZP_18364683.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
gi|358233502|dbj|GAA46994.1| PPE family protein [Mycobacterium tuberculosis NCGM2209]
Length = 1941
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 189 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 248
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 249 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 297
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1358 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1417
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1418 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1452
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1307 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1366
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1367 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1406
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1350 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1409
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1410 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1454
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 181 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 240
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 241 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 282
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1327 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1386
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1387 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1441
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1307 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1366
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1367 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1398
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 772 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 831
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 832 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 877
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 692 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 751
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 752 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 799
>gi|379029712|dbj|BAL67445.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 2097
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 323 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 382
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 383 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 431
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1492 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1551
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1552 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1586
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1540
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1484 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1543
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1544 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1588
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 315 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 374
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 375 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 416
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1461 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1520
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1521 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1575
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1441 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1500
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1501 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1532
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 906 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 965
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 966 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 1011
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 826 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 885
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 886 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 933
>gi|289576076|ref|ZP_06456303.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
K85]
gi|289540507|gb|EFD45085.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
K85]
Length = 885
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 48 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 107
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 108 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 156
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 40 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 97
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 98 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 141
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 30 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 89
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 90 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 131
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 643 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 702
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 703 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 758
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 633 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 692
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 693 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 734
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 600 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 659
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 660 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 699
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N G +G N T G+GL N G+G N G +GL N TG +G + T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
G GL N + G+ N TG GL N
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNA 96
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
+GL N G +G N T G+GL N G+G N G +GL + TG +G N T
Sbjct: 9 VGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGT 68
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G GL N + G+ N TG GL N
Sbjct: 69 GNWGLFNSGSFNTGIGNSGTGSTGLFNA 96
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 15/121 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLR 48
+G +G N TG GL N + G+ N TG GL N NTG +
Sbjct: 58 TGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAGSYNTGSFNVG 117
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
+ NTGG S NTG N NTG N +TG L N + G L N GL ++
Sbjct: 118 DTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMSGNFSNG--ILWRGNYEGLFSY 175
Query: 109 T 109
+
Sbjct: 176 S 176
>gi|440582843|emb|CCG13246.1| PPE family protein [Mycobacterium tuberculosis 7199-99]
Length = 2088
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 314 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 373
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 374 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 422
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 1483 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 1542
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 1543 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 1577
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 1531
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 1475 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 1534
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 1535 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 1579
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 366 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 407
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 1452 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 1511
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 1512 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 1566
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 1432 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 1491
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 1492 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 1523
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 897 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 956
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 957 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 1002
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 46/108 (42%), Gaps = 9/108 (8%)
Query: 2 SGGLGLRNCNTGGLGLRN-------CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG- 53
G LGL N G LG N G +G N GL N G +G N TG
Sbjct: 817 DGNLGLGNIGHGNLGFANLGLTAGAAGVGNVGFGNAGINNYGLANMGVGNIGFANTGTGN 876
Query: 54 -GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G+GL + G+G N G +GL N TG +G N TG G+ N
Sbjct: 877 IGIGLVGDHRTGIGGLNSGIGNIGLFNSGTGNVGFFNSGTGNFGIGNS 924
>gi|289759504|ref|ZP_06518882.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715068|gb|EFD79080.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 586
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 11 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 70
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 71 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 119
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 3 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 62
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 63 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 104
>gi|37525717|ref|NP_929061.1| hypothetical protein plu1782 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785146|emb|CAE14075.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 121
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +C TG L N + +C TG L + L +C TG L ++C+
Sbjct: 27 GKPQLVHCRTGSLEKSNSSQYRYPYVHCRTGSLESKQTKYRSAALVHCRTGSLE-KTCSL 85
Query: 63 GGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +C TG L + L + +C TG L
Sbjct: 86 GPLIKCVHCRTGSLEMHPSTLSPLTIVHCRTGSL 119
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 38/104 (36%), Gaps = 10/104 (9%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
+C TG L + G L +C TG L N + +C TG L + L
Sbjct: 13 HCRTGSLEKGSGPKGKPQLVHCRTGSLEKSNSSQYRYPYVHCRTGSLESKQTKYRSAALV 72
Query: 69 NCNTGGLGLR----------NCNTGGLGLRNCNTGGLGLRNCNT 102
+C TG L +C TG L + L + +C T
Sbjct: 73 HCRTGSLEKTCSLGPLIKCVHCRTGSLEMHPSTLSPLTIVHCRT 116
>gi|449662219|ref|XP_002157592.2| PREDICTED: lipoxygenase homology domain-containing protein 1-like
[Hydra magnipapillata]
Length = 2482
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L+ N G+ L+ +TGGL L+ + G+ L +TGG+ L+ +TGG+ L+ GG
Sbjct: 2259 VTLQYPNVDGVTLQYPSTGGLTLQYPSACGVTLHYPSTGGVTLQYPSTGGVTLQYPIAGG 2318
Query: 65 LGLRNCNTGGLGLRNCN 81
+ L+ T G L NCN
Sbjct: 2319 VTLQ-YPTAGSYLFNCN 2334
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGG 74
+ L+ N G+ L+ +TGGL L+ + G+ L +TGG+ L+ +TGG+ L+ GG
Sbjct: 2259 VTLQYPNVDGVTLQYPSTGGLTLQYPSACGVTLHYPSTGGVTLQYPSTGGVTLQYPIAGG 2318
Query: 75 LGLRNCNTGGLGLRNCN 91
+ L+ T G L NCN
Sbjct: 2319 VTLQ-YPTAGSYLFNCN 2334
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 25 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGG 84
+ L+ N G+ L+ +TGGL L+ + G+ L +TGG+ L+ +TGG+ L+ GG
Sbjct: 2259 VTLQYPNVDGVTLQYPSTGGLTLQYPSACGVTLHYPSTGGVTLQYPSTGGVTLQYPIAGG 2318
Query: 85 LGLRNCNTGGLGLRNCN 101
+ L+ T G L NCN
Sbjct: 2319 VTLQ-YPTAGSYLFNCN 2334
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ L+ +TGGL L+ + G+ L +TGG+ L+ +TGG+ L+ GG+ L+ T
Sbjct: 2267 DGVTLQYPSTGGLTLQYPSACGVTLHYPSTGGVTLQYPSTGGVTLQYPIAGGVTLQ-YPT 2325
Query: 63 GGLGLRNCN 71
G L NCN
Sbjct: 2326 AGSYLFNCN 2334
>gi|167966766|ref|ZP_02549043.1| ppe family protein [Mycobacterium tuberculosis H37Ra]
Length = 1140
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 84 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 143
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 144 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 192
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 76 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 133
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 134 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 177
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 92
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 93 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 132
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 66 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 125
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 126 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 167
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 679 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 738
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 739 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 794
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 669 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 728
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 729 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 770
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 636 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 695
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 696 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 735
>gi|289759495|ref|ZP_06518873.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715059|gb|EFD79071.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1102
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 46 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 105
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 106 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 154
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 38 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 95
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 96 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 139
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 28 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 87
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 88 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 129
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 641 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 700
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 701 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 756
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 631 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 690
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 691 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 732
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 598 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 657
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 658 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 697
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTG 73
G+GL N G+G N G +GL N TG +G N TG GL + + G+ N TG
Sbjct: 28 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 87
Query: 74 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
GL N GL N NTG + + NT G
Sbjct: 88 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGF 122
>gi|385996227|ref|YP_005914525.1| putative PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296181|gb|AEJ48292.1| putative PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 845
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 323 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 382
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 383 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 431
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 315 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 374
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 375 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 416
>gi|289571586|ref|ZP_06451813.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289545340|gb|EFD48988.1| predicted protein [Mycobacterium tuberculosis T17]
Length = 845
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 261 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 320
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 321 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 355
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 210 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 269
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 270 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 309
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 253 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 312
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 313 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 357
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 230 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 289
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 290 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 344
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 210 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 269
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 270 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 301
>gi|449065458|ref|YP_007432541.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|449033966|gb|AGE69393.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1061
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 5 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 64
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 65 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 113
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL-- 65
N G +GL N TG +G N TG GL N + G+ N TG GL N GG
Sbjct: 1 MNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAGGFTT 58
Query: 66 GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTGG + NTG N NT
Sbjct: 59 GLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 98
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 600 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 659
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 660 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 715
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 590 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 649
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 650 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 691
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 557 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 616
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 617 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 656
>gi|385996226|ref|YP_005914524.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296180|gb|AEJ48291.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 1148
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG GL N + G+ N TG GL N NTG
Sbjct: 662 SGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNFNTGIANPG 721
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + + NTGG + NTG NTG
Sbjct: 722 SYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTG 756
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +GL N TG G+GL G+G N +G +GL +
Sbjct: 611 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 670
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 671 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNA 710
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N +G +GL N TG +G N TG GL N + G+ N TG GL +
Sbjct: 654 GIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGTGSTGLFNAGNF 713
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--GLRNCNTR 103
NTG + NTG + + NTGG + NTG G+ N TR
Sbjct: 714 NTGIANPGSYNTGSFNVGDTNTGGFNPGDINTGWFNTGIMNTGTR 758
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 52/115 (45%), Gaps = 15/115 (13%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N TG G+GL G+G N +G +GL N TG +G N TG GL +
Sbjct: 631 GNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNSGTGNVGFFNTGTGNFGLFNS 690
Query: 61 NTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNT 102
+ G+ N TG GL N NTG + + NTGG + NT
Sbjct: 691 GSFNTGIGNSGTGSTGLFNAGNFNTGIANPGSYNTGSFNVGDTNTGGFNPGDINT 745
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +GL N TG G+GL G+G + +G +GL N
Sbjct: 611 GNVGLSNAGSNNWGLANLGVGNIGLANTGTGNIGIGLVGDYQTGIGGLNSGSGNIGLFNS 670
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG GL N + G+ N T
Sbjct: 671 GTGNVGFFNTGTGNFGLFNSGSFNTGIGNSGT 702
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 6/109 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---S 59
G +GL N TG +G N TG G+ N G+ N T GL N + G+
Sbjct: 76 GNIGLFNSGTGNVGFFNSGTGNFGIGNSGRFNTGIGNSGTASTGLFNAGSFSTGIANTGD 135
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAF 108
NTG + NTGG NTG + NT GL N T G AF
Sbjct: 136 YNTGSFNAGDTNTGGFNPGGINTGWFNTGHANT---GLANAGTFGTGAF 181
>gi|289449042|ref|ZP_06438786.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289422000|gb|EFD19201.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1236
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 180 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 239
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 240 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 288
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 172 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 229
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 230 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 273
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 129 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 188
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 189 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 228
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 162 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 221
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 222 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 263
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 775 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 834
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 835 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 890
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 765 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 824
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 825 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 866
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 732 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 791
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 792 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 831
>gi|31791483|ref|NP_853976.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|121636219|ref|YP_976442.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224988692|ref|YP_002643379.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378770052|ref|YP_005169785.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449062300|ref|YP_007429383.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|31617069|emb|CAD93176.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
gi|121491866|emb|CAL70329.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224771805|dbj|BAH24611.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341600235|emb|CCC62905.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356592373|gb|AET17602.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449030808|gb|AGE66235.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1147
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 6 DGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTG 65
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
S NTGG N NTG N NTG + +TG
Sbjct: 66 SFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 368 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 427
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 428 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 919 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNAGTGNFGLANSGGFNTGIGNAGST 978
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 979 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 1020
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTG 63
+ N G +G N TG G+ N TG G+ N + GL N NTGG + NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
+ NTGG N NTG N NTG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTG 90
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N LG N + +G N + LG N + +G N +G+ G
Sbjct: 858 IGLANLGDDNLGFGNAGSYNIGFANFGSDNLGFANTGSYNIGFANTGNNNIGVGLTGNGQ 917
Query: 65 LGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
+G+ + N+G +GL N +G +G N TG +G+ N T
Sbjct: 918 IGIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNAGT 957
>gi|289572891|ref|ZP_06453118.1| PE family protein [Mycobacterium tuberculosis K85]
gi|289537322|gb|EFD41900.1| PE family protein [Mycobacterium tuberculosis K85]
Length = 1147
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 6 DGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTG 65
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
S NTGG N NTG N NTG + +TG
Sbjct: 66 SFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 368 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 427
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 428 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTG 63
+ N G +G N TG G+ N TG G+ N + GL N NTGG + NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
+ NTGG N NTG N NTG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTG 90
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 919 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 978
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 979 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 1020
>gi|289445843|ref|ZP_06435587.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418801|gb|EFD16002.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1147
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 6 DGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTG 65
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
S NTGG N NTG N NTG + +TG
Sbjct: 66 SFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 368 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 427
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 428 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTG 63
+ N G +G N TG G+ N TG G+ N + GL N NTGG + NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
+ NTGG N NTG N NTG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTG 90
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 919 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 978
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 979 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 1020
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 430 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 489
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 490 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 540
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 437 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 496
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 497 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 555
>gi|308380659|ref|ZP_07490678.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu011]
gi|308360805|gb|EFP49656.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 426
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 297 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 356
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 357 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINT 398
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 353
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 287 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 346
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 347 STGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNT 388
>gi|289571584|ref|ZP_06451811.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289545338|gb|EFD48986.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
Length = 509
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 48/108 (44%), Gaps = 3/108 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N TG
Sbjct: 56 AGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 115
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
S NTG + + NTGG + NTG N NTG N NT V
Sbjct: 116 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANAGNVNTGAFV 163
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 48 GIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 105
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 106 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 149
>gi|298523777|ref|ZP_07011186.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298493571|gb|EFI28865.1| ppe family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 1147
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 43/97 (44%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLR 58
G +G N TG G+ N TG G+ N + GL N NTGG N NTG
Sbjct: 6 DGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTGNFNTG 65
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
S NTGG N NTG N NTG + +TG
Sbjct: 66 SFNTGGFNAGNTNTGHFNTGNYNTGIANTGDVSTGAF 102
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTG 63
+ N G +G N TG G+ N TG G+ N + GL N NTGG + NTG
Sbjct: 1 MFNSGDGNIGFFNSGTGNFGIGNTGTGNFGIGNSGSTSTGLFNSGDGNTGGFNPGNFNTG 60
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
+ NTGG N NTG N NTG
Sbjct: 61 NFNTGSFNTGGFNAGNTNTGHFNTGNYNTG 90
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 919 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 978
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 979 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 1020
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ T +G S N+G
Sbjct: 368 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTVQIGFGSFNSGS 427
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 428 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 465
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 430 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 489
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 490 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 540
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 437 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 496
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 497 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 555
>gi|308378283|ref|ZP_07668707.1| hypothetical protein TMIG_02869 [Mycobacterium tuberculosis
SUMu009]
gi|308353017|gb|EFP41868.1| hypothetical protein TMIG_02869 [Mycobacterium tuberculosis
SUMu009]
Length = 340
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 97 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 156
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 157 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 205
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 89 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 148
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 149 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 190
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 79 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 138
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 139 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 180
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 46 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 105
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 106 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 145
>gi|159185827|ref|NP_356992.2| hypothetical protein Atu3619 [Agrobacterium fabrum str. C58]
gi|159140961|gb|AAK89777.2| conserved hypothetical protein [Agrobacterium fabrum str. C58]
Length = 111
Score = 42.0 bits (97), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 31/91 (34%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNT 82
G N N G N N G N N G N G + + N GL L N N
Sbjct: 18 SGSSFDNVNLSGTDFNNVNLAGTRFSNINFSGASFTDSNMSGWSIDDVNFTGLKLSNSNL 77
Query: 83 GGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQ 113
G + C G+ + + L+A Q
Sbjct: 78 SGAQITACRMAGMKIDSIPVEDLLAAYKAAQ 108
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 28/83 (33%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
G N N G N N G N N G + N G + N GL L N N
Sbjct: 18 SGSSFDNVNLSGTDFNNVNLAGTRFSNINFSGASFTDSNMSGWSIDDVNFTGLKLSNSNL 77
Query: 73 GGLGLRNCNTGGLGLRNCNTGGL 95
G + C G+ + + L
Sbjct: 78 SGAQITACRMAGMKIDSIPVEDL 100
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 29/83 (34%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G N N G N N G N N G + N G + + N GL L + N
Sbjct: 18 SGSSFDNVNLSGTDFNNVNLAGTRFSNINFSGASFTDSNMSGWSIDDVNFTGLKLSNSNL 77
Query: 63 GGLGLRNCNTGGLGLRNCNTGGL 85
G + C G+ + + L
Sbjct: 78 SGAQITACRMAGMKIDSIPVEDL 100
>gi|308377314|ref|ZP_07668483.1| hypothetical protein TMHG_03868 [Mycobacterium tuberculosis
SUMu008]
gi|308348286|gb|EFP37137.1| hypothetical protein TMHG_03868 [Mycobacterium tuberculosis
SUMu008]
Length = 1419
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N TG GL N TG
Sbjct: 363 AGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 422
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 423 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 471
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G +GL N TG +G N TG GL N + G+ N TG GL N G
Sbjct: 355 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 412
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 413 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 456
Score = 39.3 bits (90), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G +GL +
Sbjct: 312 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNIGLFNS 371
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N TG GL N
Sbjct: 372 GTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 411
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 345 GIGLTGDNQTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNWGLFNSGSFNTGIGNSGTG 404
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 405 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 446
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 958 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 1017
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 1018 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1073
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 948 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 1007
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 1008 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 1049
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 915 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 974
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 975 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 1014
>gi|428298482|ref|YP_007136788.1| pentapeptide repeat-containing protein [Calothrix sp. PCC 6303]
gi|428235026|gb|AFZ00816.1| pentapeptide repeat protein [Calothrix sp. PCC 6303]
Length = 567
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ N G L N G+ L + G+ LRN N G+ L N L +
Sbjct: 144 GVNFSNAKMRGTRLDRVNLSGVNLSGADLSGIDLRNVNLRGINLTRINLSHANLIGFDFR 203
Query: 64 GLGLRNCNTGGLGLRNCNTG-----GLGLRNCNTGGLGLRNCN 101
G LRN N LRN + LRN N G+ RN +
Sbjct: 204 GTDLRNANLSYADLRNSDLSNAKLESADLRNANLSGVNFRNAD 246
Score = 41.2 bits (95), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 10/107 (9%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ L + G+ LRN N G+ L N L + G LRN N LR+ +
Sbjct: 163 SGVNLSGADLSGIDLRNVNLRGINLTRINLSHANLIGFDFRGTDLRNANLSYADLRNSD- 221
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGLRNCNTRG 104
L N LRN N G+ RN N G L+N + RG
Sbjct: 222 ----LSNAKLESADLRNANLSGVNFRNADLIGVNLDGASLQNADLRG 264
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 5/89 (5%)
Query: 17 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLG 76
LRN + G L + N LRN N L N + GL L G+ N G
Sbjct: 102 LRNTDFSGANLNSANFRNADLRNANFSNADLANADFSGLDL-----YGVNFSNAKMRGTR 156
Query: 77 LRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
L N G+ L + G+ LRN N RG+
Sbjct: 157 LDRVNLSGVNLSGADLSGIDLRNVNLRGI 185
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 38/95 (40%), Gaps = 5/95 (5%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
LRN + G L + N LRN N L N + GL L N +R G
Sbjct: 102 LRNTDFSGANLNSANFRNADLRNANFSNADLANADFSGLDLYGVNFSNAKMR-----GTR 156
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L N G+ L + G+ LRN N G+ L N
Sbjct: 157 LDRVNLSGVNLSGADLSGIDLRNVNLRGINLTRIN 191
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 39/106 (36%), Gaps = 15/106 (14%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
LRN N L N + GL L G+ N G L N G+ L + G+
Sbjct: 121 DLRNANFSNADLANADFSGLDL-----YGVNFSNAKMRGTRLDRVNLSGVNLSGADLSGI 175
Query: 66 GLRNCNTGGLGLRNCNTG----------GLGLRNCNTGGLGLRNCN 101
LRN N G+ L N G LRN N LRN +
Sbjct: 176 DLRNVNLRGINLTRINLSHANLIGFDFRGTDLRNANLSYADLRNSD 221
>gi|308380658|ref|ZP_07669239.1| hypothetical protein TMKG_04068, partial [Mycobacterium
tuberculosis SUMu011]
gi|308360808|gb|EFP49659.1| hypothetical protein TMKG_04068 [Mycobacterium tuberculosis
SUMu011]
Length = 310
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 67 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 126
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 127 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 175
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 59 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 118
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 119 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 160
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 49 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 108
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 109 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 150
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 16 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 75
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 76 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 115
>gi|149915056|ref|ZP_01903585.1| hypothetical protein RAZWK3B_16830 [Roseobacter sp. AzwK-3b]
gi|149811244|gb|EDM71081.1| hypothetical protein RAZWK3B_16830 [Roseobacter sp. AzwK-3b]
Length = 211
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 42/98 (42%), Gaps = 5/98 (5%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L + + G+ L N LRN N L N GG L + N G L++ N G
Sbjct: 18 LEDADLEGVNLEGANLSSAYLRNANLRRANLGGANLGGANLEDANLWGADLQNANLWGAD 77
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L+N N GG L + N LR N G LR N RG
Sbjct: 78 LQNANLGGAYLWSAN-----LRYANLRGAYLRRANLRG 110
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 5/101 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L N LRN N L N GG L + N G L+N N G L++ N G
Sbjct: 25 GVNLEGANLSSAYLRNANLRRANLGGANLGGANLEDANLWGADLQNANLWGADLQNANLG 84
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G L + N LR N G LR N G L+ + G
Sbjct: 85 GAYLWSAN-----LRYANLRGAYLRRANLRGANLQYSDLWG 120
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG L + N G L+N N G L+N N GG L + N LR N G LR N
Sbjct: 54 GGANLEDANLWGADLQNANLWGADLQNANLGGAYLWSAN-----LRYANLRGAYLRRANL 108
Query: 63 GGLGLRNCNTGGLGL 77
G L+ + G L
Sbjct: 109 RGANLQYSDLWGADL 123
>gi|433643545|ref|YP_007289304.1| Conserved protein of unknown function, PPE family protein PPE54
(modular protein) [Mycobacterium canettii CIPT 140070008]
gi|432160093|emb|CCK57412.1| Conserved protein of unknown function, PPE family protein PPE54
(modular protein) [Mycobacterium canettii CIPT 140070008]
Length = 3717
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG
Sbjct: 3267 AGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPG 3326
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTG + N NTG + NTG N NT ++
Sbjct: 3327 SYNTGSFNVGDTNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFIS 3375
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG
Sbjct: 891 AGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPG 950
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG L + + NTG + N NTG + NTG N NT ++
Sbjct: 951 SYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMS 999
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG
Sbjct: 1474 AGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPG 1533
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG L + + NTG + N NTG + NTG N NT ++
Sbjct: 1534 SYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMS 1582
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG
Sbjct: 2679 AGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPG 2738
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG L + + NTG + N NTG + NTG N NT ++
Sbjct: 2739 SYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNTGIANSGNVNTGAFMS 2787
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 51/129 (39%), Gaps = 21/129 (16%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC----------- 50
SG LGL N TG +G N G G+ N + G+ N T GL N
Sbjct: 2080 SGNLGLFNSGTGNIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTGLFNAGSFNTGVANPG 2139
Query: 51 --NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL--------GLRNC 100
NTG + S NTG N NTG + NTG N NTG L
Sbjct: 2140 GYNTGSFNVGSFNTGDFNPGNTNTGWFNAGDTNTGLFNTGNVNTGAFNSGSLNNGALWTG 2199
Query: 101 NTRGLVAFT 109
+ GLV+F+
Sbjct: 2200 DHHGLVSFS 2208
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +GL N G +GL N TG G+GL N G+G N G LGL + T
Sbjct: 842 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 901
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N T GL N
Sbjct: 902 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 939
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +GL N G +GL N TG G+GL N G+G N G LGL + T
Sbjct: 1425 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 1484
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N T GL N
Sbjct: 1485 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 1522
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +GL N G +GL N TG G+GL N G+G N G LGL + T
Sbjct: 3218 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 3277
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N T GL N
Sbjct: 3278 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 3315
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS---C 60
G+G N TG +GL N TG +G N TG GL N + G+ N T G +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG N NTG + NTG L N NT
Sbjct: 366 NTGVANPGSYNTGSFNAGNTNTGDFNPGSINTGWLNTGNINT 407
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N TG +G N TG G+ N + G+ + T
Sbjct: 873 GIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTA 932
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG L + + NTG + N NT
Sbjct: 933 STGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNINT 974
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N TG +G N TG G+ N + G+ + T
Sbjct: 1456 GIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTA 1515
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG L + + NTG + N NT
Sbjct: 1516 STGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNINT 1557
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G N + +GL N G +GL N TG G+GL N G+G N +G LGL + TG
Sbjct: 2032 GFGNAGSSNVGLANMGVGNIGLANTGTGNIGIGLVGDNLTGIGGLNSGSGNLGLFNSGTG 2091
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G N G G+ N + G+ N T GL N
Sbjct: 2092 NIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTGLFNA 2128
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S +GL N G +GL N TG G+GL N G+G N +G LGL N TG +G +
Sbjct: 2038 SSNVGLANMGVGNIGLANTGTGNIGIGLVGDNLTGIGGLNSGSGNLGLFNSGTGNIGFFN 2097
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G G+ N + G+ N T GL N + G+ N
Sbjct: 2098 SGAGNFGIGNSGSYNTGIGNSGTASTGLFNAGSFNTGVANP 2138
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N G LGL N TG +G N TG G+ N + G+ N T GL +
Sbjct: 883 GIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGF 942
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG L + + NTG + N NTG + NT
Sbjct: 943 NTGVANPGSYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNT 984
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N G LGL N TG +G N TG G+ N + G+ N T GL +
Sbjct: 1466 GIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGF 1525
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG L + + NTG + N NTG + NT
Sbjct: 1526 NTGVANPGSYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNT 1567
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
+G +GL N G +GL N TG G+GL N G+G N G LGL N TG +G +
Sbjct: 849 AGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFN 908
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 909 SGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 939
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
+G +GL N G +GL N TG G+GL N G+G N G LGL N TG +G +
Sbjct: 1432 AGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFN 1491
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 1492 SGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 1522
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
+G +GL N G +GL N TG G+GL N G+G N G LGL N TG +G +
Sbjct: 3225 AGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFN 3284
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 3285 SGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 3315
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + G N +G G N N G+GL N G+G N TG +GL +
Sbjct: 263 GNIGLGNAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNS 322
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
TG +G N TG GL N + G+ N T G N
Sbjct: 323 GTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFN 361
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N G LGL N TG +G N TG G+ N + G+ N T GL +
Sbjct: 3259 GIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGF 3318
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + + NTG + N NTG + NT
Sbjct: 3319 NTGVANPGSYNTGSFNVGDTNTGDVNPGNINTGWFNTGHSNT 3360
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +GL N G +GL N TG G+GL N G+ N G LGL + T
Sbjct: 2630 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIEGLNSGAGNLGLFNSGT 2689
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N T GL N
Sbjct: 2690 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 2727
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+ N G LGL N TG +G N TG G+ N + G+ + T
Sbjct: 2661 GIGLVGDNLTGIEGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTA 2720
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG L + + NTG + N NT
Sbjct: 2721 STGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNINT 2762
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N +G LGL N TG +G N G G+ N + G+ N T GL S
Sbjct: 2072 GIGGLNSGSGNLGLFNSGTGNIGFFNSGAGNFGIGNSGSYNTGIGNSGTASTGLFNAGSF 2131
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG + + NTG N NTG + NT
Sbjct: 2132 NTGVANPGGYNTGSFNVGSFNTGDFNPGNTNTGWFNAGDTNT 2173
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
G +GL N + G N +G G N N G+GL N G+G + TG +GL N
Sbjct: 262 VGNIGLGNAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFN 321
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 322 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGTA 355
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
+G +GL N G +GL N TG G+GL N G+ N G LGL N TG +G +
Sbjct: 2637 AGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIEGLNSGAGNLGLFNSGTGNVGFFN 2696
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 2697 SGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 2727
>gi|19922428|ref|NP_611195.1| CG11395 [Drosophila melanogaster]
gi|7302815|gb|AAF57889.1| CG11395 [Drosophila melanogaster]
gi|15291289|gb|AAK92913.1| GH14572p [Drosophila melanogaster]
gi|220945186|gb|ACL85136.1| CG11395-PA [synthetic construct]
gi|220955086|gb|ACL90086.1| CG11395-PA [synthetic construct]
Length = 456
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
GG N N GG N GG + N+GG +TGG ++GG +
Sbjct: 202 PGGFEQPNENAGGFQQSGQNNGGFRQPSQNSGGFQQPGQSTGGFQQPGQSSGGFQQPGQS 261
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG +TGG +TGG + ++GG + N+
Sbjct: 262 TGGFQQPGQSTGGFQQPGQSTGGFRQPDQSSGGFQQPDQNS 302
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 35/85 (41%)
Query: 11 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNC 70
N GG N N GG N GG + N+GG +TGG ++GG
Sbjct: 201 NPGGFEQPNENAGGFQQSGQNNGGFRQPSQNSGGFQQPGQSTGGFQQPGQSSGGFQQPGQ 260
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGL 95
+TGG +TGG +TGG
Sbjct: 261 STGGFQQPGQSTGGFQQPGQSTGGF 285
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG N GG + N+GG +TGG ++GG +TGG +
Sbjct: 212 AGGFQQSGQNNGGFRQPSQNSGGFQQPGQSTGGFQQPGQSSGGFQQPGQSTGGFQQPGQS 271
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TGG +TGG + ++GG + N+G
Sbjct: 272 TGGFQQPGQSTGGFRQPDQSSGGFQQPDQNSGEF 305
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 38/91 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG + N+GG +TGG ++GG +TGG +TGG +T
Sbjct: 223 GGFRQPSQNSGGFQQPGQSTGGFQQPGQSSGGFQQPGQSTGGFQQPGQSTGGFQQPGQST 282
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
GG + ++GG + N+G N G
Sbjct: 283 GGFRQPDQSSGGFQQPDQNSGEFQQPGLNQG 313
>gi|156394483|ref|XP_001636855.1| predicted protein [Nematostella vectensis]
gi|156223962|gb|EDO44792.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL +T LGL + +T LGL S +T
Sbjct: 3 LGLYSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMT 62
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 103
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 43 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 102
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 103 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 143
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 53 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 112
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 113 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 153
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 122
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 123 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 163
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 73 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 132
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 133 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 173
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 83 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 142
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 143 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 183
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 93 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 152
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 153 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 193
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 103 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 162
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 163 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 203
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 113 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 172
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 173 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 213
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 123 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 182
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 183 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 223
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL +T LGL + +T LGL + +T LGL S +T
Sbjct: 13 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 72
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 73 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 113
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 23 LGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 82
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 83 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 123
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 60/101 (59%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 33 LGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 92
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 93 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 133
>gi|428315035|ref|YP_007119052.1| pentapeptide repeat-containing protein [Oscillatoria nigro-viridis
PCC 7112]
gi|428245070|gb|AFZ10853.1| pentapeptide repeat protein [Oscillatoria nigro-viridis PCC 7112]
Length = 272
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 37/94 (39%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L N N G L N N + L + N L + N GG L N N G LR GG
Sbjct: 51 DLINANFSGANLSNANLNCIDLSDANLNNANLSDANLGGAQLINANLSGANLREAFFGGA 110
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
L N L+N N L + N G L+N
Sbjct: 111 DLSKANLSSACLQNANLDSADLTDANLSGANLKN 144
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 37/98 (37%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L N N L N N G L N N + L + N L + N GG L + N G
Sbjct: 42 LINANFSYADLINANFSGANLSNANLNCIDLSDANLNNANLSDANLGGAQLINANLSGAN 101
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR GG L N L+N N L + N G
Sbjct: 102 LREAFFGGADLSKANLSSACLQNANLDSADLTDANLSG 139
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 34/87 (39%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L N N + L + N L + N GG L N N G LR GG L N
Sbjct: 58 SGANLSNANLNCIDLSDANLNNANLSDANLGGAQLINANLSGANLREAFFGGADLSKANL 117
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRN 89
L+N N L + N G L+N
Sbjct: 118 SSACLQNANLDSADLTDANLSGANLKN 144
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 36/99 (36%), Gaps = 5/99 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ L + + L N N L N N L N N G L N N + L N
Sbjct: 23 SGVDLNKAHLIDIDLSNAN-----LINANFSYADLINANFSGANLSNANLNCIDLSDANL 77
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L + N GG L N N G LR GG L N
Sbjct: 78 NNANLSDANLGGAQLINANLSGANLREAFFGGADLSKAN 116
>gi|254552452|ref|ZP_05142899.1| PPE family protein, partial [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 537
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 130 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 189
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 190 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 238
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 122 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 181
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 182 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINT 223
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 112 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 171
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 172 STGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNT 213
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 79 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 138
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 139 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 178
>gi|424806819|ref|ZP_18232250.1| LOW QUALITY PROTEIN: PPE family protein, partial [Mycobacterium
tuberculosis W-148]
gi|326906095|gb|EGE53028.1| LOW QUALITY PROTEIN: PPE family protein [Mycobacterium tuberculosis
W-148]
Length = 436
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+G G N T GL N TG GL N TG +G+ N TGG G+ +G+ N
Sbjct: 5 AGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGIGGTN 64
Query: 62 TGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+G +GL N TG +G+ N TG +G+ N TG G+ N
Sbjct: 65 SGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGTGNTGIGNS 105
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
N G G N T GL N TG GL N TG +G+ N TGG G+ +G+
Sbjct: 1 MNSGAGNTGFFNSGTANTGLFNSGTGNTGLFNSGTGNVGIGNMGTGGFGVGLSGDSQVGI 60
Query: 68 RNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
N+G +GL N TG +G+ N TG +G+ N T
Sbjct: 61 GGTNSGSFNIGLFNSGTGNVGIGNSGTGNVGIGNTGT 97
>gi|433632452|ref|YP_007266080.1| Conserved protein of unknown function, PPE family protein PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432164045|emb|CCK61478.1| Conserved protein of unknown function, PPE family protein PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 1268
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 49/104 (47%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N TG +G N TG G+ N + G+ N T GL N NTG
Sbjct: 891 AGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGFNTGVANPG 950
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTG L + + NTG + N NTG + NTG N NT
Sbjct: 951 SYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNTGIANSGNVNT 994
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N G +GL N G +GL N TG G+GL N G+G N G LGL + T
Sbjct: 842 VGWGNAGAGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGT 901
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N T GL N
Sbjct: 902 GNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 939
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS---C 60
G+G N TG +GL N TG +G N TG GL N + G+ N T G +
Sbjct: 306 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFNGGGF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG N NTG + NTG L N NT
Sbjct: 366 NTGVANPGSYNTGSFNAGNTNTGDFNPGSINTGWLNTGNINT 407
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N TG +G N TG G+ N + G+ + T
Sbjct: 873 GIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTA 932
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG L + + NTG + N NT
Sbjct: 933 STGLFNAGGFNTGVANPGSYNTGSLNVGDTNTGDVNPGNINT 974
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N G LGL N TG +G N TG G+ N + G+ N T GL +
Sbjct: 883 GIGGLNSGAGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSYNTGIGNSGTASTGLFNAGGF 942
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG L + + NTG + N NTG + NT
Sbjct: 943 NTGVANPGSYNTGSLNVGDTNTGDVNPGNINTGWFNTGHSNT 984
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
+G +GL N G +GL N TG G+GL N G+G N G LGL N TG +G +
Sbjct: 849 AGNVGLANMGLGNVGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNLGLFNSGTGNVGFFN 908
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 909 SGTGNFGIGNSGSYNTGIGNSGTASTGLFNA 939
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + G N +G G N N G+GL N G+G N TG +GL +
Sbjct: 263 GNIGLGNAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFNS 322
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
TG +G N TG GL N + G+ N T G N
Sbjct: 323 GTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGTASTGWFN 361
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
G +GL N + G N +G G N N G+GL N G+G + TG +GL N
Sbjct: 262 VGNIGLGNAGSANYGFANMGSGNFGFANTGNNNIGIGLTGNNLTGIGGLNSGTGNIGLFN 321
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG GL N + G+ N T
Sbjct: 322 SGTGNVGFFNSGTGNFGLFNSGSYNTGIGNSGTA 355
>gi|308380664|ref|ZP_07669242.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
gi|308360798|gb|EFP49649.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 793
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 271 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 330
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 331 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 379
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 263 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 322
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 323 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 364
>gi|256822896|ref|YP_003146859.1| pentapeptide repeat-containing protein [Kangiella koreensis DSM
16069]
gi|256796435|gb|ACV27091.1| pentapeptide repeat protein [Kangiella koreensis DSM 16069]
Length = 583
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 5/107 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+ LR+ + G LR N G LRN N GL ++ G + N N L N
Sbjct: 122 SSVDLRDHDLRGQDLREANLSGADLRNQNLEGLDMQGAKLIGAKMGNVNLRDTNLNKANL 181
Query: 63 GGLGLRNCNTGGLGLR-----NCNTGGLGLRNCNTGGLGLRNCNTRG 104
+ L +C G+ L+ N N GL L N G+ + + R
Sbjct: 182 SDVDLSSCRIEGVTLKGANLSNANISGLDLSGFNLNGVNFKGADLRS 228
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 44/128 (34%), Gaps = 30/128 (23%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLR--------------------NCNTGGLGLRNCNTG 43
G LR N G LRN N GL ++ N + L +C
Sbjct: 133 GQDLREANLSGADLRNQNLEGLDMQGAKLIGAKMGNVNLRDTNLNKANLSDVDLSSCRIE 192
Query: 44 GLGLR-----NCNTGGLGLRSCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
G+ L+ N N GL L N G+ LR+ N G L N L T
Sbjct: 193 GVTLKGANLSNANISGLDLSGFNLNGVNFKGADLRSANLGRANLDNAILSATKLWQVQTN 252
Query: 94 GLGLRNCN 101
G +RN +
Sbjct: 253 GWSIRNID 260
>gi|156366813|ref|XP_001627116.1| predicted protein [Nematostella vectensis]
gi|156214016|gb|EDO35016.1| predicted protein [Nematostella vectensis]
Length = 102
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG---LGLRNCNTGGLGLRNCNTGGLGLRSC 60
G G++N G G++N G G++ G G++N G G++N G G+++
Sbjct: 1 GRGVQNMGVPGRGVQNMGVPGTGVQKMGVPGKGMPGVQNMGMPGTGVQNMGVPGTGVQNM 60
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
G G++N G+G++N G G++N G G+ +
Sbjct: 61 GVPGTGVQNMGVPGMGVQNMRVPGTGVQNMGVPGTGVPD 99
>gi|340373663|ref|XP_003385360.1| PREDICTED: mucin-19-like [Amphimedon queenslandica]
Length = 1097
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 49/124 (39%), Gaps = 13/124 (10%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL L N GL L N GL L N GL L N GL L N G+ L N
Sbjct: 384 SGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTRTNQSGVPLTRTNQ 443
Query: 63 GGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGGLGLRNCNTRGL---------VAFTGP 111
GL L N GL L T G+ L N GL L N GL V FTG
Sbjct: 444 SGLQLTGTNQSGLKL--TGTNQSGIQLSGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGT 501
Query: 112 TQAG 115
Q+G
Sbjct: 502 NQSG 505
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 42/105 (40%), Gaps = 4/105 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL L N GL L N GL L N GL L N GL L N GL L T
Sbjct: 364 SGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSGLQL--TGT 421
Query: 63 --GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
GL L N G+ L N GL L N GL L N G+
Sbjct: 422 NQSGLQLTRTNQSGVPLTRTNQSGLQLTGTNQSGLKLTGTNQSGI 466
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 49/123 (39%), Gaps = 11/123 (8%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------- 55
GL L N G+ L N GL L N GL L N G+ N GL
Sbjct: 454 SGLKLTGTNQSGIQLSGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQ 513
Query: 56 -GLRSCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPT 112
GL+ T GL L N G+ L N GL L N GL L N G V FTG
Sbjct: 514 SGLQFAGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQFGLQLTGTNQSG-VPFTGTN 572
Query: 113 QAG 115
Q+G
Sbjct: 573 QSG 575
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL L N G+ N GL L N G+ N GL L N GL L T
Sbjct: 704 SGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFPGTNQSGLQLTGTNQSGLQL--TGT 761
Query: 63 --GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
GL L N G+ N GL L N GL L N G V FTG Q+G
Sbjct: 762 NQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSG-VPFTGTNQSG 815
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 46/121 (38%), Gaps = 11/121 (9%)
Query: 6 GLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GL+ T GL L N G+ N GL L N GL L N G+ L N
Sbjct: 785 GLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPLTGTNQT 844
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL---------VAFTGPTQA 114
GL L N GL L N G+ N GL L N GL V F G Q+
Sbjct: 845 GLQLTGTNQSGLQLTGINQSGVPFPGTNQSGLQLTGTNQSGLQLTGINQSGVPFPGTNQS 904
Query: 115 G 115
G
Sbjct: 905 G 905
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 40/105 (38%), Gaps = 4/105 (3%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT--GGLGLRNCNTGGLGLRSC 60
GL L N G+ L N GL L N GL L T G+ L N GL L
Sbjct: 424 SGLQLTRTNQSGVPLTRTNQSGLQLTGTNQSGLKL--TGTNQSGIQLSGTNQSGLQLTGT 481
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
N GL L N G+ N GL L N GL N GL
Sbjct: 482 NQSGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQFAGTNQSGL 526
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ L N GL L N G+ N GL L N G+ N GL L T
Sbjct: 674 SGVPLTGTNQTGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGVPFTGTNQSGLQL--TGT 731
Query: 63 --GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
G+ N GL L N GL L N GL L N G V FTG Q+G
Sbjct: 732 NQSGVPFPGTNQSGLQLTGTNQSGLQLTGTNQSGLQLTGTNQSG-VPFTGTNQSG 785
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 45/115 (39%), Gaps = 5/115 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GL L N G+ N GL L N GL L N G+ N GL L T
Sbjct: 764 SGLQLTGTNQSGVPFTGTNQSGLQLTGTNQSGLQLTGTNQSGVPFTGTNQSGLQL--TGT 821
Query: 63 --GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
GL L N G+ L N GL L N GL L N G V F G Q+G
Sbjct: 822 NQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSGLQLTGINQSG-VPFPGTNQSG 875
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Query: 6 GLRNCNT--GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GL+ T GL L N L L N G+ N L L N G+ L N
Sbjct: 595 GLQLTGTNQTGLQLTGTNQSRLQLTGTNQSGVPFTGTNQSSLQLTGTNQSGVPLTGTNQT 654
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQAG 115
GL L N GL L N G+ L N GL L N G V FTG Q+G
Sbjct: 655 GLQLTGTNQSGLQLTGTNQSGVPLTGTNQTGLQLTGTNQSG-VPFTGTNQSG 705
>gi|308406131|ref|ZP_07669519.1| hypothetical protein TMLG_03839, partial [Mycobacterium
tuberculosis SUMu012]
gi|308364410|gb|EFP53261.1| hypothetical protein TMLG_03839 [Mycobacterium tuberculosis
SUMu012]
Length = 781
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 259 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 318
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 319 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 367
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 251 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 310
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 311 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 352
>gi|308378288|ref|ZP_07668710.1| hypothetical protein TMIG_03623, partial [Mycobacterium
tuberculosis SUMu009]
gi|308353008|gb|EFP41859.1| hypothetical protein TMIG_03623 [Mycobacterium tuberculosis
SUMu009]
Length = 749
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N G+ N T GL N NTG + +
Sbjct: 227 TGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNFNTGVVNVG 286
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTGG NTG L N NTG N NT ++
Sbjct: 287 SYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNTGIANSGNVNTGAFIS 335
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N TG G+ N G+ N T GL +
Sbjct: 219 GIGGLNSGTGNIGLFNSGTGNVGFFNSGTGNFGVFNSGNYNTGVGNAGTASTGLFNAGNF 278
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + + NTG + NTGG NTG L N NT
Sbjct: 279 NTGVVNVGSYNTGSFNAGDTNTGGFNPGGVNTGWLNTGNTNT 320
>gi|307086112|ref|ZP_07495225.1| hypothetical protein TMLG_03990, partial [Mycobacterium
tuberculosis SUMu012]
gi|308364417|gb|EFP53268.1| hypothetical protein TMLG_03990 [Mycobacterium tuberculosis
SUMu012]
Length = 1360
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 89 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 148
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 149 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 197
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1274 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1333
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGL 85
S NTG NTGG + NTG L
Sbjct: 1334 SYNTGSFNAGQANTGGFNPGSVNTGWL 1360
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 525 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 584
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 585 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 615
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 71 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 130
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 131 STGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNT 172
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 1256 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 1315
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 1316 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 1357
>gi|307086111|ref|ZP_07495224.1| hypothetical protein TMLG_03989, partial [Mycobacterium
tuberculosis SUMu012]
gi|308364418|gb|EFP53269.1| hypothetical protein TMLG_03989 [Mycobacterium tuberculosis
SUMu012]
Length = 641
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 14 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 73
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 74 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 122
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 6 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 65
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 66 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 107
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 539 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 598
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 599 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 638
>gi|183981653|ref|YP_001849944.1| PPE family protein [Mycobacterium marinum M]
gi|183174979|gb|ACC40089.1| PPE family protein [Mycobacterium marinum M]
Length = 2754
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 46/107 (42%), Gaps = 7/107 (6%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GL 55
G LG N G LG N G LG N G G N G G N NTG G+
Sbjct: 2440 GNLGDHNIGPGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIGI 2499
Query: 56 GLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL G G N TG +GL N T +GL N TG +GL N T
Sbjct: 2500 GLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGT 2546
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTG----GLGLRNCNTGG 54
G LG N G LG N G G N G G N NTG G+GL G
Sbjct: 2449 PGNLGDYNIGLGNLGDSNVGFGNAGDHNVGVGNAGFNNFGFANTGSNNIGIGLSGDGQVG 2508
Query: 55 LGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G + TG +GL N T +GL N TG +GL N TG G+ N
Sbjct: 2509 FGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNS 2554
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 52/127 (40%), Gaps = 23/127 (18%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----------------------C 40
G G N TG +GL N T +GL N TG G+ N
Sbjct: 2023 GFGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGATNTGLLNAGLV 2082
Query: 41 NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
NTG N N+GG S NTG + NTGGL + NTG L + NTG + +
Sbjct: 2083 NTGVGNAGNYNSGGFNTGSTNTGSFNPGDYNTGGLNQGDYNTGYLNSGDYNTGFVNAGDV 2142
Query: 101 NTRGLVA 107
NT ++
Sbjct: 2143 NTGAFIS 2149
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------- 50
G G N TG +GL N T +GL N TG +GL N TG G+ N
Sbjct: 2508 GFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNYNTGIGNAGAT 2567
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N N+GG + NTG + NTG L + NT
Sbjct: 2568 NTGLFNTGLVNTGVGNAGNYNSGGFNTGSTNTGSFNSGDHNTGYLNSGDYNT 2619
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 49/112 (43%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------- 50
G+GL G+G N TG +GL N T +GL N TG G+ N
Sbjct: 1574 GIGLSGDGQVGIGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGAT 1633
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L NTG N N+GGL + NTG + NTG L N NT
Sbjct: 1634 NTGLLNAGLVNTGVGNAGNYNSGGLNAGHTNTGSFNSGDYNTGYLNPGNYNT 1685
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL G G N TG +GL N T +GL N TG +GL N TG G+ +
Sbjct: 2498 GIGLSGDGQVGFGALNSGTGNIGLFNSGTDNIGLFNSGTGNIGLFNSGTGSFGIGNSGNY 2557
Query: 64 GLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNT 102
G+ N GL N NTG N N+GG + NT
Sbjct: 2558 NTGIGNAGATNTGLFNTGLVNTGVGNAGNYNSGGFNTGSTNT 2599
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 48/112 (42%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------- 50
G+GL G+G N TG +GL N T +GL N TG G+ N
Sbjct: 297 GIGLSGDGQVGIGALNSGTGNIGLFNSGTDNIGLFNSGTGNFGIGNSGDYNTGIGNAGAT 356
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L NTG N N+GG + NTG + NTG L N NT
Sbjct: 357 NTGLLNAGLVNTGVGNAGNYNSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNT 408
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 49/116 (42%), Gaps = 14/116 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------- 50
G+GL G G N TG +GL N +GL N TG G+ N
Sbjct: 720 GIGLSGDGQVGFGALNSGTGNIGLFNSGADNIGLFNSGTGNFGIGNSGDYNTGIGNAGAT 779
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG L NTG N N+GG + NTG + NTG L N NT GLV
Sbjct: 780 NTGLLNAGLVNTGVSNAGNYNSGGFNAGHTNTGSFNSGDYNTGYLNPGNYNT-GLV 834
>gi|306790592|ref|ZP_07428914.1| hypothetical protein TMDG_03996, partial [Mycobacterium
tuberculosis SUMu004]
gi|308332997|gb|EFP21848.1| hypothetical protein TMDG_03996 [Mycobacterium tuberculosis
SUMu004]
Length = 1283
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 53 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 112
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 113 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 161
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 489 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 548
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 549 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 579
>gi|306786224|ref|ZP_07424546.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308329164|gb|EFP18015.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 1558
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
>gi|156394481|ref|XP_001636854.1| predicted protein [Nematostella vectensis]
gi|156223961|gb|EDO44791.1| predicted protein [Nematostella vectensis]
Length = 167
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T LGL + +T
Sbjct: 53 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMT 112
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 113 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMSLGLSSYSTMTL 153
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL + +T LGL +T LGL S +T
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
LGL + +T LGL + +T LGL + +T LGL
Sbjct: 123 LGLCSYSTMTLGLCSYSTMSLGLSSYSTMTLGL 155
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL +T LGL + +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 43 LGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 102
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL +T LGL + +T LGL + +T LGL + +T L
Sbjct: 103 LGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMSL 143
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL +T LGL + +T LGL +T LGL S +T
Sbjct: 3 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 62
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + +T LGL + +T L
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTL 103
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL +T LGL + +T LGL + +T LGL + +T LGL S +T
Sbjct: 33 LGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 92
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL +T LGL + +T LGL + +T L
Sbjct: 93 LGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMTL 133
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL +T LGL + +T LGL +T LGL + +T LGL S +T
Sbjct: 13 LGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMT 72
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL--RNCNTRGLVAFTGPT 112
LGL + +T LGL + +T LGL + +T LGL + T GL +++ T
Sbjct: 73 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMT 122
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 58/101 (57%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL +T LGL + +T LGL +T LGL + +T LGL + +T LGL S +T
Sbjct: 23 LGLCTYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 82
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL +T LGL + +T L
Sbjct: 83 LGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTL 123
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 54/93 (58%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL + +T LGL + +T LGL +T LGL + +T LGL S +T
Sbjct: 73 LGLCSYSTMTLGLCSYSTMTLGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYSTMT 132
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
LGL + +T LGL + +T LGL + LGL
Sbjct: 133 LGLCSYSTMSLGLSSYSTMTLGLCTYSIMTLGL 165
>gi|306973797|ref|ZP_07486458.1| hypothetical protein TMJG_03530, partial [Mycobacterium
tuberculosis SUMu010]
gi|308356854|gb|EFP45705.1| hypothetical protein TMJG_03530 [Mycobacterium tuberculosis
SUMu010]
Length = 1307
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 117 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 176
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 177 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 225
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 553 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 612
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 613 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 643
>gi|385996217|ref|YP_005914515.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296171|gb|AEJ48282.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 2909
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2651 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2710
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2711 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2759
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2183
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 292 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 351
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 352 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINT 393
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 2643 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 2702
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 2703 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNT 2744
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 282 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 341
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 342 STGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNT 383
>gi|289763535|ref|ZP_06522913.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
gi|289711041|gb|EFD75057.1| PPE-repeat protein [Mycobacterium tuberculosis GM 1503]
Length = 1134
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 677 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 736
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 737 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 785
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 79 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 138
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 139 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 195
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 669 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 728
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 729 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 770
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 36 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 95
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 96 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 135
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 69 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 128
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 129 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 170
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 626 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 685
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 686 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 725
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 659 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 718
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 719 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 760
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 25/134 (18%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----------------------NTGGLGLR 38
SG +GL N TG +G N TG G+ N NTG +
Sbjct: 87 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 146
Query: 39 NCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
+ NTG NTGG S NTG L + NTG + NTG N + G
Sbjct: 147 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNG--AFW 204
Query: 99 NCNTRGLVAFTGPT 112
+ +GL+ F+ P
Sbjct: 205 TGDYQGLLDFSFPV 218
>gi|417823961|ref|ZP_12470552.1| hypothetical protein VCHE48_1897 [Vibrio cholerae HE48]
gi|340047646|gb|EGR08569.1| hypothetical protein VCHE48_1897 [Vibrio cholerae HE48]
Length = 96
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 36/89 (40%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
+C TG L + +C TG L + +C TG L + T L L
Sbjct: 8 HCRTGSLETTHSAPAFPVFVHCRTGSLEIEMKRENLAKSVHCRTGSLEMSKLTTWLLLLV 67
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
+C TG L + N+ G +C TG L +
Sbjct: 68 HCRTGSLEMHQKNSAASGCVHCRTGSLEI 96
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 32/84 (38%)
Query: 19 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLR 78
+C TG L + +C TG L + C TG L + T L L
Sbjct: 8 HCRTGSLETTHSAPAFPVFVHCRTGSLEIEMKRENLAKSVHCRTGSLEMSKLTTWLLLLV 67
Query: 79 NCNTGGLGLRNCNTGGLGLRNCNT 102
+C TG L + N+ G +C T
Sbjct: 68 HCRTGSLEMHQKNSAASGCVHCRT 91
>gi|148824549|ref|YP_001289303.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|297636000|ref|ZP_06953780.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|148723076|gb|ABR07701.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 2532
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2183
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
>gi|306786223|ref|ZP_07424545.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308329165|gb|EFP18016.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 549
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 268 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 327
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 328 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 376
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 260 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 319
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 320 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 361
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 217 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 276
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 277 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 316
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 250 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 309
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 310 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 351
>gi|289752047|ref|ZP_06511425.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692634|gb|EFD60063.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1140
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N TG
Sbjct: 84 AGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 143
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 144 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 192
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 76 GIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 133
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 134 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 177
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 679 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 738
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 739 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 794
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G LGL +
Sbjct: 33 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 92
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 93 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 132
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N G +G N TG GL N + G+ + TG
Sbjct: 66 GIGLTGDNQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTG 125
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 126 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 167
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 669 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 728
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 729 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 770
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 636 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 695
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 696 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 735
>gi|162448369|ref|YP_001610736.1| PPE family protein [Sorangium cellulosum So ce56]
gi|161158951|emb|CAN90256.1| probable PPE family protein [Sorangium cellulosum So ce56]
Length = 138
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 46/89 (51%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
R+ N G +G N N G +G N N G +G N N G +G N N G +G + N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
N N G +G N N G +G N N G +G
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLNLGRVG 126
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%)
Query: 18 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGL 77
R+ N G +G N N G +G N N G +G N N G +G + N G +G N N G +G
Sbjct: 38 RHLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGT 97
Query: 78 RNCNTGGLGLRNCNTGGLGLRNCN 101
N N G +G N N G +G N N
Sbjct: 98 SNLNLGRVGTSNLNLGRVGTSNLN 121
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G +G N N G +G N N G +G N N G +G N N G +G N N G +G + N
Sbjct: 43 GRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNLGRVGTSNLNL 102
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLG 86
G +G N N G +G N N G +G
Sbjct: 103 GRVGTSNLNLGRVGTSNLNLGRVG 126
>gi|313660329|ref|ZP_07817209.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length = 2532
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2183
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
>gi|253800388|ref|YP_003033389.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|297732997|ref|ZP_06962115.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|375297616|ref|YP_005101883.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392433827|ref|YP_006474871.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253321891|gb|ACT26494.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328460121|gb|AEB05544.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392055236|gb|AFM50794.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 2532
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2183
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
>gi|385992585|ref|YP_005910883.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339299778|gb|AEJ51888.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 3108
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2183
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2651 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 2710
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2711 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2759
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
>gi|343475429|emb|CCD13175.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 238
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 44/131 (33%), Gaps = 31/131 (23%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN------------ 51
GLG TG G + TGG G + GG G GG G ++
Sbjct: 90 GLGQTPATTGAFG-QPAATGGFG-QAATAGGFGQPAATAGGFGQQSATGFGQAGATTPFG 147
Query: 52 ---------------TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLG 96
GG G + TG LG TG G + TGG G + GG G
Sbjct: 148 QATGRGTTGGFGQPTAGGFGQPAAGTG-LGQTATATGAFG-QPAATGGFGQQPATAGGFG 205
Query: 97 LRNCNTRGLVA 107
+ + G A
Sbjct: 206 QQPVTSFGQTA 216
>gi|424805908|ref|ZP_18231339.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326905184|gb|EGE52117.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 3113
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2080 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2140 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2188
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2656 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 2715
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2716 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2764
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1482 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGF 1541
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1542 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1598
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 831
>gi|308372510|ref|ZP_07428915.2| LOW QUALITY PROTEIN: hypothetical protein TMDG_04044, partial
[Mycobacterium tuberculosis SUMu004]
gi|308332996|gb|EFP21847.1| LOW QUALITY PROTEIN: hypothetical protein TMDG_04044 [Mycobacterium
tuberculosis SUMu004]
Length = 553
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 66 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 125
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 126 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 174
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 58 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 117
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 118 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 159
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 15 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 74
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 75 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 114
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 48 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 107
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 108 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 149
>gi|306805157|ref|ZP_07441825.1| hypothetical protein TMHG_02569, partial [Mycobacterium
tuberculosis SUMu008]
gi|308348294|gb|EFP37145.1| hypothetical protein TMHG_02569 [Mycobacterium tuberculosis
SUMu008]
Length = 599
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 352 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 411
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 412 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 460
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 344 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 403
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 404 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 445
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 301 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 360
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 361 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 400
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 334 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 393
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 394 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 435
>gi|254552450|ref|ZP_05142897.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 1150
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 117 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 176
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 177 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 225
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 693 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 752
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 753 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 801
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 685 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 744
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 745 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 786
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 66 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 125
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 126 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 165
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 642 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 701
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 702 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 741
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 99 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 158
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 159 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 200
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 675 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 734
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 735 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 776
>gi|395544184|ref|XP_003773992.1| PREDICTED: 182 kDa tankyrase-1-binding protein [Sarcophilus harrisii]
Length = 1928
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Query: 42 TGGLGLRNCNTGG----LGLRSCNTGGLGLRNCNTGGLGLRNCNTG-------------- 83
T LGLRN + G GLR G+G + ++ LGLRN N
Sbjct: 1357 TDDLGLRNLDVSGCLESEGLREAREHGVGQTDWSSD-LGLRNMNVPSGLGNGGPGESREL 1415
Query: 84 GLGLRNCNTGGLGLRNCNTRGLVAFTGPTQA 114
G+G ++ T LGLRN + G++ GP++A
Sbjct: 1416 GVGQKDW-TPDLGLRNIDVSGVLESAGPSEA 1445
>gi|386000137|ref|YP_005918436.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344221184|gb|AEN01815.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 2537
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2080 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2139
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2140 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2188
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1482 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 1541
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1542 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1598
>gi|298526820|ref|ZP_07014229.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496614|gb|EFI31908.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 2523
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2066 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2125
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2126 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2174
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1598
>gi|294995888|ref|ZP_06801579.1| PPE family protein [Mycobacterium tuberculosis 210]
Length = 2511
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2183
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
>gi|289755476|ref|ZP_06514854.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289696063|gb|EFD63492.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 1626
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G LGL N G +G N TG GL N + G+ N TG GL N TG
Sbjct: 570 AGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNAGGFTTGLANAG 629
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + + NTGG + NTG N NTG N +T L++
Sbjct: 630 SYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTGIANSGNVDTGALMS 678
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G LGL N G +G N TG GL N + G+ N TG GL N G
Sbjct: 562 GIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGL--FNAG 619
Query: 64 GL--GLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G GL N NTG + + NTGG + NTG N NT
Sbjct: 620 GFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANT 663
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 50/116 (43%), Gaps = 13/116 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G+G N TG +GL N TG +G N T GL N NTG GL N
Sbjct: 1165 GIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNAGGF 1224
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
NTG S NTG + NTGG + NTG N NTG N NT L+
Sbjct: 1225 NTGVANAGSYNTGSFNAGDTNTGGFNPGSTNTGWFNTGNANTGVANAGNVNTGALI 1280
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + +GL N G +G N T G+GL N G+G N G LGL +
Sbjct: 519 GNIGLGNAGSTNVGLANMGVGNIGFANTGTNNLGIGLTGDNQTGIGGLNSGAGNLGLFNS 578
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG GL N + G+ N TG GL N
Sbjct: 579 GAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTGSTGLFNA 618
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 16 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
G+ N TG GL N + GL N NTG L N NTGG + NTG + NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFT 109
GG N NTG + N G L + GLV F+
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNG--ALWTGDHHGLVGFS 104
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G LGL N G +G N TG GL N + G+ + TG
Sbjct: 552 GIGLTGDNQTGIGGLNSGAGNLGLFNSGAGNVGFFNSGTGNWGLFNSGSFNTGIGNSGTG 611
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N GL N NTG + + NTGG + NT
Sbjct: 612 STGLFNAGGFTTGLANAGSYNTGSFNVGDTNTGGFNPGSINT 653
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ N TG GL N + GL N NTG L N NTGG N NTG NT
Sbjct: 10 GIGNSGTGSTGLFNAGSFNTGLANAGSYNTGSLNAGNTNTGGFNPGNVNTGWFNAGHTNT 69
Query: 63 GGLGLRNCNTGGLGLRNCNTGGL 85
GG N NTG + N G L
Sbjct: 70 GGFNTGNVNTGAFNSGSFNNGAL 92
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 1155 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 1214
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 1215 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 1256
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 1122 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 1181
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 1182 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 1221
>gi|535260|emb|CAA82996.1| STARP antigen [Plasmodium reichenowi]
Length = 655
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 31/96 (32%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NT N NT N NT N NT N NT + NT
Sbjct: 437 NTNTKATDSNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNN 496
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
N NT N NT N NT N NT+
Sbjct: 497 NTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKA 532
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 31/96 (32%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N +T N NT N NT N NT N NT + NT
Sbjct: 427 NTDTKATDNNNTNTKATDSNNTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKATDNN 486
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
N NT N NT N NT N NT+
Sbjct: 487 NTNTKATDNNNTNTKATDNNNTNTKATDNNNTNTKA 522
>gi|379029702|dbj|BAL67435.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1942
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1485 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1544
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1545 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1593
>gi|306799310|ref|ZP_07437612.1| hypothetical protein TMFG_04045, partial [Mycobacterium
tuberculosis SUMu006]
gi|308340486|gb|EFP29337.1| hypothetical protein TMFG_04045 [Mycobacterium tuberculosis
SUMu006]
Length = 454
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 19 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 78
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 79 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 127
>gi|308376082|ref|ZP_07446012.2| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
gi|308344372|gb|EFP33223.1| putative PPE family protein [Mycobacterium tuberculosis SUMu007]
Length = 1338
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 881 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 940
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 941 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 989
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 873 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 932
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 933 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNT 974
>gi|308374848|ref|ZP_07437615.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308340483|gb|EFP29334.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 1494
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
>gi|308370231|ref|ZP_07420739.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308324933|gb|EFP13784.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 1221
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 16 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 75
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 76 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 124
>gi|57117092|ref|YP_177960.1| PPE family protein PPE54 [Mycobacterium tuberculosis H37Rv]
gi|397675290|ref|YP_006516825.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|81400923|sp|Q6MWY2.1|PPE54_MYCTU RecName: Full=Uncharacterized PPE family protein PPE54
gi|395140195|gb|AFN51354.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444896898|emb|CCP46164.1| PPE family protein PPE54 [Mycobacterium tuberculosis H37Rv]
Length = 2523
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1598
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2066 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2125
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2126 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2174
>gi|148663206|ref|YP_001284729.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|148507358|gb|ABQ75167.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 1947
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1598
>gi|433636455|ref|YP_007270082.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
gi|432168048|emb|CCK65572.1| Conserved protein of unknown function, PPE family [Mycobacterium
canettii CIPT 140070017]
Length = 3669
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 54
G +G N G +G N G L G N +G LGL N G +G N TG G
Sbjct: 2554 DGNVGFGNVGHGNVGFGNSGLGALAGSNIGFANTGSGNLGLANMGLGNIGFANTGTGNIG 2613
Query: 55 LGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G+G N TG +GL N TG +G N G G+ N
Sbjct: 2614 IGLVGDNLTGIGGLNAGTGNIGLFNSGTGNVGFFNSGAGNFGMFNS 2659
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
SG LGL N G +G N TG G+GL N G+G N TG +GL N TG +G +
Sbjct: 2589 SGNLGLANMGLGNIGFANTGTGNIGIGLVGDNLTGIGGLNAGTGNIGLFNSGTGNVGFFN 2648
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNT 102
G G+ N + G+ N T GL N NTG + + NT
Sbjct: 2649 SGAGNFGMFNSGSYNTGIGNSGTASTGLFNAGNFNTGMANVGHYNT 2694
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNTGGLGLRNCNT 72
+G N +G LGL N G +G N TG G+GL N G+G + TG +GL N T
Sbjct: 2582 IGFANTGSGNLGLANMGLGNIGFANTGTGNIGIGLVGDNLTGIGGLNAGTGNIGLFNSGT 2641
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G +G N G G+ N + G+ N T
Sbjct: 2642 GNVGFFNSGAGNFGMFNSGSYNTGIGNSGTA 2672
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 45/112 (40%), Gaps = 13/112 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG GL N + G+ + TG
Sbjct: 283 GIGLTGDNLTGIGSWNSGVGNIGLFNSGTGNVGFFNSGTGNFGLFNSGSHNTGIGNSGTG 342
Query: 64 GLGLRNC-------------NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
G N NTG + NTG NTG N NT
Sbjct: 343 STGFFNAGNFNSGLGNTGHYNTGSFNAGDTNTGDFNPGGINTGWFNTGNINT 394
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N G G+ N + G+ + T
Sbjct: 2613 GIGLVGDNLTGIGGLNAGTGNIGLFNSGTGNVGFFNSGAGNFGMFNSGSYNTGIGNSGTA 2672
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG N NTG + NT
Sbjct: 2673 STGLFNAGNFNTGMANVGHYNTGNFNTGNTNTGDFNPGDTNT 2714
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGL-----GLRNCNTGGLGLRNCNTGGLGLRNCNTG--G 54
G +G N G LG N G L G N +G LGL N +G N T G
Sbjct: 3136 DGNVGFGNIGHGNLGFGNAALGALAGGNVGWGNAGSGNLGLANLGAANIGFANTGTNNIG 3195
Query: 55 LGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G+G N G +GL N TG +G N TG GL N
Sbjct: 3196 IGLVGDNLTGIGGLNSGAGNVGLFNSGTGNVGFFNTGTGNFGLFNS 3241
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G+G N TG +GL N TG +G N G G+ N + G+ N T GL +
Sbjct: 2623 GIGGLNAGTGNIGLFNSGTGNVGFFNSGAGNFGMFNSGSYNTGIGNSGTASTGLFNAGNF 2682
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG N NTG + NTG + NT
Sbjct: 2683 NTGMANVGHYNTGNFNTGNTNTGDFNPGDTNTGWFNTGHTNT 2724
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 17 LRNCNTGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGG 74
L N G +G N N G+GL N G+G N G +GL + TG +G N TG
Sbjct: 264 LANMGVGNIGFANTGNNNIGIGLTGDNLTGIGSWNSGVGNIGLFNSGTGNVGFFNSGTGN 323
Query: 75 LGLRNCNTGGLGLRNCNTGGLGLRNC 100
GL N + G+ N TG G N
Sbjct: 324 FGLFNSGSHNTGIGNSGTGSTGFFNA 349
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 40/106 (37%), Gaps = 13/106 (12%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC------------ 50
G +GL N TG +G N TG GL N + G+ N TG G N
Sbjct: 302 GNIGLFNSGTGNVGFFNSGTGNFGLFNSGSHNTGIGNSGTGSTGFFNAGNFNSGLGNTGH 361
Query: 51 -NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
NTG NTG NTG N NTG N NTG
Sbjct: 362 YNTGSFNAGDTNTGDFNPGGINTGWFNTGNINTGWANSGNVNTGAF 407
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N G G+ N + G+ N T GL N NTG +
Sbjct: 2631 TGNIGLFNSGTGNVGFFNSGAGNFGMFNSGSYNTGIGNSGTASTGLFNAGNFNTGMANVG 2690
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
NTG N NTG + NTG + NTG
Sbjct: 2691 HYNTGNFNTGNTNTGDFNPGDTNTGWFNTGHTNTG 2725
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNC--NTGGLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N G G N G +G N N G+GL N G+G N TG +GL N
Sbjct: 1988 GNVGFGNAGHGNYGFANFGVGNVGFANMGNNNIGIGLVGDNLTGIGGLNSGTGNIGLFNS 2047
Query: 81 NTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N
Sbjct: 2048 GTGNVGFFNTGTGNFGLFNS 2067
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 47/109 (43%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
+G +GL N TG +G N TG GL N + G+ N +TG N NTG
Sbjct: 3213 AGNVGLFNSGTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGIASTGFFNAGNFNTGLANTG 3272
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + NTG N NTG + NTG N NT +A
Sbjct: 3273 HYNTGSFNAGSTNTGDFNPGNTNTGWFNTGHANTGLGNAGNVNTGAFIA 3321
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N +G LG N G +GL N TG G+GL N G+G N G +GL N
Sbjct: 1423 GNVGSGNAGSGNLGFGNVGLGNIGLANTGTGNIGIGLTGDNQFGIGGLNSGAGNIGLFNS 1482
Query: 81 NTGGLGLRNCNTGGLGLRNCNTR 103
G +G N TG +GL N +
Sbjct: 1483 GAGNVGFFNTGTGNVGLFNSGSH 1505
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N +G LGL N +G N T G+GL N G+G N G +GL +
Sbjct: 3162 GNVGWGNAGSGNLGLANLGAANIGFANTGTNNIGIGLVGDNLTGIGGLNSGAGNVGLFNS 3221
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG GL N + G+ N G N
Sbjct: 3222 GTGNVGFFNTGTGNFGLFNSGSYNTGIGNSGIASTGFFNA 3261
>gi|306973798|ref|ZP_07486459.1| hypothetical protein TMJG_04104, partial [Mycobacterium
tuberculosis SUMu010]
gi|308356853|gb|EFP45704.1| hypothetical protein TMJG_04104 [Mycobacterium tuberculosis
SUMu010]
Length = 231
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 106 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 165
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 166 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 214
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 55 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 114
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 115 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 154
>gi|440582835|emb|CCG13238.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 1947
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1598
>gi|253990214|ref|YP_003041570.1| conserved hypothetical protein [Photorhabdus asymbiotica]
gi|253781664|emb|CAQ84827.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 158
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 39/97 (40%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
L L +C TG L + L L +C TG L + G L +C TG L +
Sbjct: 60 ELMLVHCRTGSLEKSSNQYIELMLVHCRTGSLENNKIHHHGYVLVHCRTGSLERKIAPFS 119
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +C TG L + +C TG L R+C
Sbjct: 120 GSNTVHCRTGSLEIFADVFVKFFYVHCRTGSLEKRSC 156
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 37/89 (41%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
+C TG L + L L +C TG L + L L +C TG L + G L
Sbjct: 45 HCRTGSLEKSSNQYIELMLVHCRTGSLEKSSNQYIELMLVHCRTGSLENNKIHHHGYVLV 104
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
+C TG L + G +C TG L +
Sbjct: 105 HCRTGSLERKIAPFSGSNTVHCRTGSLEI 133
>gi|443709297|gb|ELU04009.1| hypothetical protein CAPTEDRAFT_194605 [Capitella teleta]
Length = 175
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 16/114 (14%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCN--TGGLGLRN--------------CNTGGLGLRN 49
G + CN G + CN G + CN T G ++ CN G +
Sbjct: 18 GYQICNKRTQGYQMCNKRTQGYQMCNKRTQGYQMQMMTDEESQPLRSLGMCNKRTQGYQM 77
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
CN G + CN G + CN G + CN G + CN G + CN R
Sbjct: 78 CNKRTQGYQMCNKRTHGYQMCNKRAQGYQMCNKRTQGYQMCNKRTQGYQMCNKR 131
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 16/110 (14%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN--TGGLGLR--------------NCNTG 53
CN G + CN G + CN G + CN T G ++ CN
Sbjct: 12 CNKRTQGYQICNKRTQGYQMCNKRTQGYQMCNKRTQGYQMQMMTDEESQPLRSLGMCNKR 71
Query: 54 GLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G + CN G + CN G + CN G + CN G + CN R
Sbjct: 72 TQGYQMCNKRTQGYQMCNKRTHGYQMCNKRAQGYQMCNKRTQGYQMCNKR 121
>gi|306805156|ref|ZP_07441824.1| hypothetical protein TMHG_02568 [Mycobacterium tuberculosis
SUMu008]
gi|308348309|gb|EFP37160.1| hypothetical protein TMHG_02568 [Mycobacterium tuberculosis
SUMu008]
Length = 512
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 55 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 114
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 115 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 163
>gi|429964252|gb|ELA46250.1| hypothetical protein VCUG_02259 [Vavraia culicis 'floridensis']
Length = 604
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 6/110 (5%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+SGG G +GG G +GG G +GG G +GG G +GG G
Sbjct: 93 VSGGEGEEKVKSGGEGEEKVKSGGEGEEKVKSGGEGEEKVKSGGEGEEKVKSGGKGEEKM 152
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTG 110
+GG ++N + C+ G L++ + L +C L+A G
Sbjct: 153 KSGGGAIKNVKEEK---KWCD-GTANLKHDMVHNIRLEDC--MPLIALKG 196
>gi|433633366|ref|YP_007266993.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070017]
gi|432164959|emb|CCK62426.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070017]
Length = 1079
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N TG LGL N TG +G N TG G+ N NTG + NTG +
Sbjct: 321 GFGGLNSGTGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSHNTGFFNAGSTNTGFVNSGLA 380
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + N+G L + N NTG N NTG L N NT
Sbjct: 381 NTGIANTGDYNSGNLNVGNLNTGSYNPGNVNTGYLNPGNTNT 422
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 48/107 (44%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG +GL N T +G N G +G+ N NTG + NTG S
Sbjct: 772 GIGGVNSGTGNIGLFNSGTANIGFFNSGDGNIGIGNAGSTNTGIFNVGGVNTGVGNTGSY 831
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + N NTG N NTG N NTG + NT ++
Sbjct: 832 NTGIFNVGNTNTGAYNPGNVNTGAFNPGNANTGVANTGDINTGAFIS 878
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+GL G G N TG LGL N TG +G N TG G+ N NTG S
Sbjct: 311 GIGLTGAGQVGFGGLNSGTGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSHNTGFFNAGST 370
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + N+G L + N NTG N NT
Sbjct: 371 NTGFVNSGLANTGIANTGDYNSGNLNVGNLNTGSYNPGNVNT 412
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 43/95 (45%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLR 58
+G LGL N TG +G N TG G+ N + G N + G N NTG
Sbjct: 329 TGNLGLFNSGTGNVGFFNSGTGNFGIGNSGSHNTGFFNAGSTNTGFVNSGLANTGIANTG 388
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N+G L + N NTG N NTG L N NTG
Sbjct: 389 DYNSGNLNVGNLNTGSYNPGNVNTGYLNPGNTNTG 423
>gi|308372509|ref|ZP_07428913.2| hypothetical protein TMDG_03995, partial [Mycobacterium
tuberculosis SUMu004]
gi|308332998|gb|EFP21849.1| hypothetical protein TMDG_03995 [Mycobacterium tuberculosis
SUMu004]
Length = 310
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 198 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 257
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 258 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 306
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 190 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 249
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 250 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 291
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 25 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNT 82
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 149 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 208
Query: 83 GGLGLRNCNTGGLGLRNCNTR 103
G +G N TG G+ N +
Sbjct: 209 GNVGFFNSGTGNWGVFNSGSY 229
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + GL N G +G N +G G+GL N G G N +G +GL + T
Sbjct: 149 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 208
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N GL N
Sbjct: 209 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 246
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 180 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 239
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 240 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 281
>gi|427738985|ref|YP_007058529.1| putative low-complexity protein [Rivularia sp. PCC 7116]
gi|427374026|gb|AFY57982.1| putative low-complexity protein [Rivularia sp. PCC 7116]
Length = 540
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L N + L + G+ L N G L + N G+ L + G+ LR N G
Sbjct: 99 LSNADLSYADLSDTKLTGINLSNTKLRGTRLDDVNLYGVNLSGADLSGVNLRYVNLNGAI 158
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
L N L+N + G L+N + G LRN N R
Sbjct: 159 LNRVNLKYANLKNFDFKGTSLQNADLSGANLRNANFR 195
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 42/102 (41%), Gaps = 10/102 (9%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ LR N G L N L+N + G L+N + G LRN N L++ N
Sbjct: 145 SGVNLRYVNLNGAILNRVNLKYANLKNFDFKGTSLQNADLSGANLRNANFRNAKLQNAN- 203
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L N N G LR G+ L G LRN + RG
Sbjct: 204 ----LSNTNLDGANLRYAELIGVRL-----NGASLRNADLRG 236
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 38/88 (43%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L N G L + N G+ L + G+ LR N G L N L++ +
Sbjct: 116 GINLSNTKLRGTRLDDVNLYGVNLSGADLSGVNLRYVNLNGAILNRVNLKYANLKNFDFK 175
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCN 91
G L+N + G LRN N L+N N
Sbjct: 176 GTSLQNADLSGANLRNANFRNAKLQNAN 203
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L + N G+ L + G+ LR N G L N L+N + G L++ + G
Sbjct: 129 LDDVNLYGVNLSGADLSGVNLRYVNLNGAILNRVNLKYANLKNFDFKGTSLQNADLSGAN 188
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
LRN N L+N N L N N G LR
Sbjct: 189 LRNANFRNAKLQNAN-----LSNTNLDGANLRYAE 218
>gi|306777677|ref|ZP_07416014.1| hypothetical protein TMAG_04047, partial [Mycobacterium
tuberculosis SUMu001]
gi|308213993|gb|EFO73392.1| hypothetical protein TMAG_04047 [Mycobacterium tuberculosis
SUMu001]
Length = 491
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 26 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 85
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 86 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 134
>gi|339633354|ref|YP_004724996.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339332710|emb|CCC28428.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 2523
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 413
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1598
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2066 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2125
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2126 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2174
>gi|289576071|ref|ZP_06456298.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289540502|gb|EFD45080.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 2523
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 413
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1598
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2066 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2125
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2126 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2174
>gi|422814435|ref|ZP_16862800.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
gi|323718016|gb|EGB27199.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 757
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
>gi|308373710|ref|ZP_07667634.1| hypothetical protein TMEG_04013, partial [Mycobacterium
tuberculosis SUMu005]
gi|308336619|gb|EFP25470.1| hypothetical protein TMEG_04013 [Mycobacterium tuberculosis
SUMu005]
Length = 276
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 162 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 221
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 222 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 270
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 154 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 213
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 214 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 255
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 111 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 170
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 171 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 210
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 111 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 170
Query: 81 NTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG G+ N +
Sbjct: 171 GTGNVGFFNSGTGNWGVFNSGSY 193
>gi|308378281|ref|ZP_07482109.2| hypothetical protein TMIG_02867 [Mycobacterium tuberculosis
SUMu009]
gi|308353033|gb|EFP41884.1| hypothetical protein TMIG_02867 [Mycobacterium tuberculosis
SUMu009]
Length = 512
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 55 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 114
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 115 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 163
>gi|340628327|ref|YP_004746779.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
gi|340006517|emb|CCC45701.1| PPE family protein [Mycobacterium canettii CIPT 140010059]
Length = 2538
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2081 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2140
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2141 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2189
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNSGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1598
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSHNSGIGNSGIASTGLFNAGDFNTGLVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 413
>gi|121639271|ref|YP_979495.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224991768|ref|YP_002646457.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378773132|ref|YP_005172865.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449065454|ref|YP_007432537.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|121494919|emb|CAL73402.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224774883|dbj|BAH27689.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341603296|emb|CCC65974.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356595453|gb|AET20682.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|449033962|gb|AGE69389.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1338
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 413
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 881 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 940
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 941 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 989
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 297 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 356
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 357 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNT 398
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 873 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 932
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 933 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNT 974
>gi|31794527|ref|NP_857020.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31620123|emb|CAD95503.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 1338
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 413
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 881 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 940
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 941 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 989
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 297 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 356
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 357 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNT 398
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 873 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 932
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 933 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNT 974
>gi|385993406|ref|YP_005911704.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339293360|gb|AEJ45471.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 993
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+GL N +G N +G+ N + +G N +G +G+ TG +G S N+G
Sbjct: 214 IGLANLGNYSVGFANSGNYHIGIANTGSANIGFANTGSGNIGIGLTGTGQIGFGSFNSGS 273
Query: 65 --LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL N G +G N TG +G+ N T G+ N
Sbjct: 274 HNIGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANS 311
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSC 60
G+G N + +GL N +G +G N TG +G+ N TG GL N NTG S
Sbjct: 765 GIGSLNSGSNNIGLFNSGSGNIGFFNSGTGNVGIFNTGTGNFGLANSGGFNTGIGNAGST 824
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG + NTG L + NT
Sbjct: 825 NTGVFNPGDLNTGSFNPGSFNTGGFNPGSGNTGYLNTGDYNT 866
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 45/111 (40%), Gaps = 13/111 (11%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCN 51
+GL N G +G N TG +G+ N T G+ N NTG N N
Sbjct: 276 IGLFNSGDGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVN 335
Query: 52 TGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG S NTG + NTG L + NTG + NTG + NT
Sbjct: 336 TGVGNTGSINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNT 386
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 13/119 (10%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
G +G N TG +G+ N T G+ N NTG N NTG
Sbjct: 283 DGNVGFFNSGTGNVGIGNTGTANFGIANSGSFNTGLGNTGSTNTGLFNPGNVNTGVGNTG 342
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ NTG S NTG L + NTG + NTG + NTG N NT ++
Sbjct: 343 SINTGSFNTGSTNTGSFNLGDHNTGSFNSGDYNTGYFNAGDYNTGVANTGNVNTGAFIS 401
>gi|306782401|ref|ZP_07420738.1| hypothetical protein TMBG_02042, partial [Mycobacterium
tuberculosis SUMu002]
gi|308324934|gb|EFP13785.1| hypothetical protein TMBG_02042 [Mycobacterium tuberculosis
SUMu002]
Length = 340
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 211 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 270
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 271 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 319
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 25 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNT 82
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 162 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 221
Query: 83 GGLGLRNCNTGGLGLRNCNTR 103
G +G N TG G+ N +
Sbjct: 222 GNVGFFNSGTGNWGVFNSGSY 242
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + GL N G +G N +G G+GL N G G N +G +GL + T
Sbjct: 162 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 221
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N GL N
Sbjct: 222 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 259
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 203 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 262
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 263 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 304
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 193 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 252
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 253 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 294
>gi|307081507|ref|ZP_07490677.1| hypothetical protein TMKG_04094, partial [Mycobacterium
tuberculosis SUMu011]
gi|308360806|gb|EFP49657.1| hypothetical protein TMKG_04094 [Mycobacterium tuberculosis
SUMu011]
Length = 322
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 213 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 272
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 273 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 321
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+G N + GL N G +G N +G G+GL N G G N +G +GL + T
Sbjct: 164 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 223
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G +G N TG G+ N + G+ N GL N
Sbjct: 224 GNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 261
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 205 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 264
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 265 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 306
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Query: 25 LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNCNT 82
+G N + GL N G +G N +G G+GL N G G N +G +GL N T
Sbjct: 164 IGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGT 223
Query: 83 GGLGLRNCNTGGLGLRNCNTR 103
G +G N TG G+ N +
Sbjct: 224 GNVGFFNSGTGNWGVFNSGSY 244
>gi|308372508|ref|ZP_07428912.2| hypothetical protein TMDG_03994, partial [Mycobacterium
tuberculosis SUMu004]
gi|308333013|gb|EFP21864.1| hypothetical protein TMDG_03994 [Mycobacterium tuberculosis
SUMu004]
Length = 519
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 62 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 121
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 122 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 170
>gi|306786222|ref|ZP_07424544.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308329180|gb|EFP18031.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 501
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 44 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 103
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 104 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 152
>gi|306967856|ref|ZP_07480517.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu009]
gi|308354507|gb|EFP43358.1| putative PPE family protein [Mycobacterium tuberculosis SUMu009]
Length = 493
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|308380653|ref|ZP_07490674.2| hypothetical protein TMKG_02602 [Mycobacterium tuberculosis
SUMu011]
gi|308360826|gb|EFP49677.1| hypothetical protein TMKG_02602 [Mycobacterium tuberculosis
SUMu011]
Length = 473
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 16 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 75
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 76 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 124
>gi|289571585|ref|ZP_06451812.1| predicted protein [Mycobacterium tuberculosis T17]
gi|289545339|gb|EFD48987.1| predicted protein [Mycobacterium tuberculosis T17]
Length = 1077
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
+G +GL N TG +G N TG G+ N + G+ N TG GL N NTG
Sbjct: 550 AGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSFNTGVANAG 609
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
S NTG + NTGG NTG + NTG
Sbjct: 610 SYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNTG 644
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+G N G +GL N TG +G N TG G+ N + G+ N TG GL S
Sbjct: 542 GIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTGSTGLFNAGSF 601
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG NTG + NT
Sbjct: 602 NTGVANAGSYNTGSFNAGDTNTGGFNPGTINTGWFNTGHTNT 643
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N G +GL N TG +G N TG G+ N + G+ + TG
Sbjct: 532 GIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGSFNTGIGNSGTG 591
Query: 64 GLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNT 102
GL N + G+ N NTG + NTGG NT
Sbjct: 592 STGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGFNPGTINT 633
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 5 LGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+GL N TG G+GL N G+G N G +GL N TG +G N TG G+ + +
Sbjct: 521 IGLANTGTGNIGIGLVGDNLTGIGGLNSGAGNIGLFNSGTGNIGFFNSGTGNFGIGNSGS 580
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTRGL 105
G+ N TG GL N + G+ N NTG + NT G
Sbjct: 581 FNTGIGNSGTGSTGLFNAGSFNTGVANAGSYNTGSFNAGDTNTGGF 626
>gi|183980667|ref|YP_001848958.1| PPE family protein [Mycobacterium marinum M]
gi|183173993|gb|ACC39103.1| PPE family protein [Mycobacterium marinum M]
Length = 3516
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLR 58
SG +G+ N +G GL N GL N T G+ N GL N NTG
Sbjct: 692 SGNIGIGNSGSGNTGLLNAGVANWGLENPGTANTGIGNAGQYNTGLHNVGAANTGFYNNG 751
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
S NTGG + + NTG + NTG + NTG N NT
Sbjct: 752 SYNTGGFNVGSTNTGSFDAGSANTGNFNPGDTNTGSYNPGNVNT 795
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+G N G GL N T +GL N +G +G+ N +G GL N GL + T
Sbjct: 664 GIGALNSGIGNAGLFNSGTDNVGLFNSGSGNIGIGNSGSGNTGLLNAGVANWGLENPGTA 723
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTRGLVA 107
G+ N GL N G N NTGG + + NT A
Sbjct: 724 NTGIGNAGQYNTGLHNVGAANTGFYNNGSYNTGGFNVGSTNTGSFDA 770
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
+GL N TG G+ N TG G+ N NTG + NTG NTG + S
Sbjct: 289 IGLFNSGTGNFGIGNSGTGNWGIGNSGNSYNTGIGNSGDANTGFFNAGVANTGIGNVGSY 348
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTGG + NTGG + NTG L + NTG N NT L
Sbjct: 349 NTGGFNPGDANTGGFNTGSYNTGYLNRGDYNTGVANFGNVNTGAL 393
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLRSCN 61
GL N T G+ N GL N G N NTGG + + NTG S N
Sbjct: 715 WGLENPGTANTGIGNAGQYNTGLHNVGAANTGFYNNGSYNTGGFNVGSTNTGSFDAGSAN 774
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
TG + NTG N NTG N N G
Sbjct: 775 TGNFNPGDTNTGSYNPGNVNTGFFDTGNYNNG 806
>gi|307079765|ref|ZP_07488935.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu011]
gi|308362385|gb|EFP51236.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 491
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|82704830|ref|XP_726716.1| erythrocyte membrane protein [Plasmodium yoelii yoelii 17XNL]
gi|23482242|gb|EAA18281.1| ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 [Plasmodium yoelii yoelii]
Length = 1665
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 38/95 (40%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L+ CN + CN ++ CN ++ CN + CN ++ CN
Sbjct: 1396 LQPCNRHIHNHQPCNRHPQNIQLCNIHLQNIQLCNRHPQNIHLCNRHPQNIQPCNRHPQN 1455
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
++ CN ++ CN ++ CN ++ CN
Sbjct: 1456 IQPCNRHPQNIQPCNRHPQNIQPCNRHPQNIQPCN 1490
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 38/95 (40%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
++ CN L+ CN + CN ++ CN ++ CN + CN
Sbjct: 1386 IQPCNRHPHNLQPCNRHIHNHQPCNRHPQNIQLCNIHLQNIQLCNRHPQNIHLCNRHPQN 1445
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
++ CN ++ CN ++ CN ++ CN
Sbjct: 1446 IQPCNRHPQNIQPCNRHPQNIQPCNRHPQNIQPCN 1480
>gi|330801053|ref|XP_003288545.1| hypothetical protein DICPUDRAFT_98057 [Dictyostelium purpureum]
gi|325081395|gb|EGC34912.1| hypothetical protein DICPUDRAFT_98057 [Dictyostelium purpureum]
Length = 445
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 37/112 (33%), Gaps = 10/112 (8%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
L LRN N + N L N L + G LR N G L SCN
Sbjct: 293 SKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGADLSGASLRGTNLTGANLESCNL 352
Query: 63 GGLG----------LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G L N N L N G LR CN L NCN RG
Sbjct: 353 KGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNFKNANLENCNFRG 404
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 38/104 (36%), Gaps = 5/104 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G LR N G L +CN G + L N N L N G LR CN
Sbjct: 333 SGASLRGTNLTGANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRVCNF 392
Query: 63 GGLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L NCN G L +CN G L N G+ LR N
Sbjct: 393 KNANLENCNFRGADLAGANLEDCNLRGANLHKANLIGVNLRGAN 436
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 35/95 (36%), Gaps = 5/95 (5%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
+ G LR N G L +CN G + L N N L N G LR
Sbjct: 330 ADLSGASLRGTNLTGANLESCNLKGANFEDRGGQRATLENVNFKNATLEEANFSGANLRV 389
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
CN L NCN R + G L +CN RG
Sbjct: 390 CNFKNANLENCN-----FRGADLAGANLEDCNLRG 419
>gi|229819861|ref|YP_002881387.1| hypothetical protein Bcav_1366 [Beutenbergia cavernae DSM 12333]
gi|229565774|gb|ACQ79625.1| hypothetical protein Bcav_1366 [Beutenbergia cavernae DSM 12333]
Length = 741
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GGLG+ GGLG+ T GLG+ T GLG+ T GLG+ GLG+ +
Sbjct: 169 GGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVAALAAGLGVVAAPV 228
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 94
GG+ C G R C G L N G
Sbjct: 229 GGVA--RCPVGAPADRACAHGVLSEENQGVGA 258
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 2/77 (2%)
Query: 22 TGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRN 79
GGL C TG GLG+ GGLG+ T GLG+ + T GLG+ T GLG+
Sbjct: 156 VGGLRAPVCRTGVGGLGVVAAPVGGLGVVAALTDGLGVVAALTDGLGVVAALTDGLGVVA 215
Query: 80 CNTGGLGLRNCNTGGLG 96
GLG+ GG+
Sbjct: 216 ALAAGLGVVAAPVGGVA 232
>gi|289445005|ref|ZP_06434749.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417924|gb|EFD15164.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 1765
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 103 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 162
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 163 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 211
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1288 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 1347
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1348 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1396
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 539 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 598
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 599 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 629
>gi|344240751|gb|EGV96854.1| Keratin-associated protein 4-3 [Cricetulus griseus]
Length = 224
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 35/96 (36%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L NC+ L C+ L C+ L NC+ L C+ L +C+
Sbjct: 48 HLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTC 107
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L NC+ L C+ L C+ L NC+
Sbjct: 108 HLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCH 143
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 33/98 (33%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L NC+ L C+ L C+ L NC+ L C+ L +C+
Sbjct: 78 HLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTC 137
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
L NC+ L C L C+ L C+
Sbjct: 138 HLDNCHLDTCHLDTCQLDTCFLDTCHIDTCHLDTCHIE 175
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 34/96 (35%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L C+ L NC+ L C+ L C+ L NC+ L +C+
Sbjct: 53 HLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNC 112
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L C+ L NC+ L C+ L C+
Sbjct: 113 HLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCH 148
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 34/95 (35%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L C+ L NC+ L C+ L C+ L NC+ L +C+
Sbjct: 39 LDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCH 98
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L C+ L NC+ L C+ L C+
Sbjct: 99 LDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCH 133
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 33/95 (34%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L NC+ L C+ L C+ L NC+ L C+ L +C+
Sbjct: 63 HLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTC 122
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
L NC+ L C+ L C+ L C
Sbjct: 123 HLDNCHLDTCHLDTCHLDNCHLDTCHLDTCQLDTC 157
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 33/96 (34%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L C+ L NC+ L C+ L C+ L NC+ L +C+
Sbjct: 68 HLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNC 127
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L C+ L NC+ L C L C+
Sbjct: 128 HLDTCHLDTCHLDNCHLDTCHLDTCQLDTCFLDTCH 163
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 35/96 (36%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L NC+ L C+ L C+ L NC+ L C+ L +C+
Sbjct: 18 HLDNCHLDTCHLGTCHLDTCLLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTC 77
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L NC+ L C+ L C+ L NC+
Sbjct: 78 HLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCH 113
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 34/99 (34%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L C L C+ L C+ L NC+ L C+ L +C+
Sbjct: 30 GTCHLDTCLLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCHLDTCHL 89
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L NC+ L C+ L C+ L NC+
Sbjct: 90 DTCHLDNCHLDTCHLDTCHLDNCHLDTCHLDTCHLDNCH 128
>gi|289747163|ref|ZP_06506541.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289687691|gb|EFD55179.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 3108
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 300 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 359
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 360 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 408
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2075 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 2134
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2135 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2183
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2651 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 2710
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2711 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 2759
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 1477 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGF 1536
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1537 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1593
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 736 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 795
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 796 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 826
>gi|417969816|ref|ZP_12610752.1| pentapeptide repeat-containing protein [Corynebacterium glutamicum
S9114]
gi|344045920|gb|EGV41589.1| pentapeptide repeat-containing protein [Corynebacterium glutamicum
S9114]
Length = 183
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 32/104 (30%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
S G R C + G R C G + C G + C G L C C
Sbjct: 73 ESAGCEPRRCRSAGCEPRGCRPAGCEPKGCRPAGCKPKGCRPVGSRLAGCENAECENAEC 132
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G R C G R C G + C G + C +G
Sbjct: 133 EPAGCEPRGCEPRGCEPRGCRPAGCKPKGCRPAGCKPKGCTPKG 176
>gi|306775945|ref|ZP_07414282.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu001]
gi|308215584|gb|EFO74983.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 531
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|306795114|ref|ZP_07433416.1| hypothetical protein TMEG_04012, partial [Mycobacterium
tuberculosis SUMu005]
gi|308336635|gb|EFP25486.1| hypothetical protein TMEG_04012 [Mycobacterium tuberculosis
SUMu005]
Length = 469
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 12 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 71
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 72 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 120
>gi|289755469|ref|ZP_06514847.1| PPE family protein [Mycobacterium tuberculosis EAS054]
gi|289696056|gb|EFD63485.1| PPE family protein [Mycobacterium tuberculosis EAS054]
Length = 2102
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1069 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 1128
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1129 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1177
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1645 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 1704
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1705 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1753
>gi|289759492|ref|ZP_06518870.1| PPE family protein [Mycobacterium tuberculosis T85]
gi|289715056|gb|EFD79068.1| PPE family protein [Mycobacterium tuberculosis T85]
Length = 1184
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 151 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 210
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 211 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 259
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 727 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 786
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 787 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 835
>gi|306779763|ref|ZP_07418100.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308327310|gb|EFP16161.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 535
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|118616565|ref|YP_904897.1| PPE family protein [Mycobacterium ulcerans Agy99]
gi|118568675|gb|ABL03426.1| PPE family protein [Mycobacterium ulcerans Agy99]
Length = 490
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRN 49
G GL N TG +GL N TG G+ N G GL N NTG L + N
Sbjct: 323 GNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGN 382
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
NTG L S N G NTG L NTG + NTG + + N
Sbjct: 383 ANTGSLNTGSFNMGSFNPGPSNTGALNTGTANTGWFNTGSLNTGPFNIGDMN 434
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 7 LRNCNTG----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
R NTG G+GL N G+G N G GL N TG +GL N TG G+ +
Sbjct: 293 FRFANTGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVGLFNSGTGNFGIGNSGA 352
Query: 63 GGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 95
G GL N NTG L + NTG L + N NTG L
Sbjct: 353 YGTGLFNSGQANTGLLNAGSFNTGLLDVGNANTGSL 388
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+GL N G+G N G GL N TG +GL N TG G+ N G GL
Sbjct: 304 GIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQA 363
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NTG L + NTG L + N NTG L + N G NT L
Sbjct: 364 NTGLLNAGSFNTGLLDVGNANTGSLNTGSFNMGSFNPGPSNTGAL 408
>gi|289445844|ref|ZP_06435588.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289418802|gb|EFD16003.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1003
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G G N +G +GL N + +G N +G G+ N NTG N NTG
Sbjct: 193 GFGSFNSGSGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDV 252
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + NTG + NTGG N NTG L + N NT
Sbjct: 253 NTGAFNPGSFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNT 294
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRNCNTGGLGLR 48
SG +GL N + +G N +G G+ N NTG + NTG
Sbjct: 201 SGNIGLFNSGSNNIGFFNSGSGNFGIANSGSFNTGIGNTGNTNTGLFNSGDVNTGAFNPG 260
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG S NTGG N NTG L + N NTG + +TG
Sbjct: 261 SFNTGSFNTGSFNTGGFNPGNTNTGYLNIGNYNTGIANTGDVDTGAF 307
>gi|433632448|ref|YP_007266076.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432164041|emb|CCK61474.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 2105
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1072 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1131
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1132 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1180
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1648 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1707
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1708 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1756
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + +GL N G +G N TG G+GL N G G N +G +GL N
Sbjct: 1597 GNIGFGNVGSYNVGLANMGVGNIGFANTGTGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 1656
Query: 81 NTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N
Sbjct: 1657 GTGNVGFFNSGTGNWGVFNS 1676
>gi|427415347|ref|ZP_18905532.1| putative low-complexity protein [Leptolyngbya sp. PCC 7375]
gi|425756112|gb|EKU96971.1| putative low-complexity protein [Leptolyngbya sp. PCC 7375]
Length = 358
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L + + + L++ + L + + G L G LR+ + LRS G
Sbjct: 211 ISLEDADLKDVDLKDADLLFADLSSTDLSGADLSGAELAGADLRDADLWSTNLRSALLWG 270
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
LR+ N LRN N L++ N LR+ N +G
Sbjct: 271 SNLRSANLRSADLRNAN-----LKDANLRSADLRDANLKG 305
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 38/99 (38%), Gaps = 5/99 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
+ L++ + L + + G L G LR+ + LR+ G LRS N
Sbjct: 219 KDVDLKDADLLFADLSSTDLSGADLSGAELAGADLRDADLWSTNLRSALLWGSNLRSANL 278
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
LRN N L++ N LR+ N G L N
Sbjct: 279 RSADLRNAN-----LKDANLRSADLRDANLKGADLAAAN 312
>gi|289449037|ref|ZP_06438781.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421995|gb|EFD19196.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1458
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
>gi|306788863|ref|ZP_07427185.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu004]
gi|308334582|gb|EFP23433.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 554
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|306784498|ref|ZP_07422820.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308330757|gb|EFP19608.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 543
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|163854826|ref|YP_001629124.1| hypothetical protein Bpet0521 [Bordetella petrii DSM 12804]
gi|163258554|emb|CAP40853.1| putative secreted protein [Bordetella petrii]
Length = 875
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LR+ N G L + N G + +C G+ L+ C+ GL +++C+ G+ L C+ G
Sbjct: 619 LRHANLGSATLTDTNLSGAHIAHCELAGIRLQRCDLSGLTMQDCHLPGVELAGCHFDG 676
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%)
Query: 27 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGG 84
LR+ N G L + N G + +C G+ L+ C+ GL +++C+ G+ L C+ G
Sbjct: 619 LRHANLGSATLTDTNLSGAHIAHCELAGIRLQRCDLSGLTMQDCHLPGVELAGCHFDG 676
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%)
Query: 47 LRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
LR+ N G L N G + +C G+ L+ C+ GL +++C+ G+ L C+ G V
Sbjct: 619 LRHANLGSATLTDTNLSGAHIAHCELAGIRLQRCDLSGLTMQDCHLPGVELAGCHFDGAV 678
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 37 LRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 94
LR+ N G L + N G + C G+ L+ C+ GL +++C+ G+ L C+ G
Sbjct: 619 LRHANLGSATLTDTNLSGAHIAHCELAGIRLQRCDLSGLTMQDCHLPGVELAGCHFDG 676
>gi|306803461|ref|ZP_07440129.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu008]
gi|308349871|gb|EFP38722.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 552
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|434394476|ref|YP_007129423.1| pentapeptide repeat protein [Gloeocapsa sp. PCC 7428]
gi|428266317|gb|AFZ32263.1| pentapeptide repeat protein [Gloeocapsa sp. PCC 7428]
Length = 183
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 39/92 (42%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
CN G L++ N G L+ N G L++ + LR+ N LR + L+
Sbjct: 64 CNLSGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQG 123
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
N G L++ + L+N N L+N +
Sbjct: 124 ANLSGANLQSADLEEANLQNANFQNANLQNAD 155
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 38/89 (42%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L++ N G L+ N G L++ + LR+ N LR+ + L+ N
Sbjct: 67 SGADLQDANLEGANLQGANLQGANLQSADLDQANLRDANLQQANLRDADLEEADLQGANL 126
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 91
G L++ + L+N N L+N +
Sbjct: 127 SGANLQSADLEEANLQNANFQNANLQNAD 155
>gi|308375671|ref|ZP_07444707.2| LOW QUALITY PROTEIN: putative PPE family protein, partial
[Mycobacterium tuberculosis SUMu007]
gi|308345567|gb|EFP34418.1| LOW QUALITY PROTEIN: putative PPE family protein [Mycobacterium
tuberculosis SUMu007]
Length = 551
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|422812745|ref|ZP_16861129.1| PPE family protein, partial [Mycobacterium tuberculosis CDC1551A]
gi|323719734|gb|EGB28849.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 557
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|449282265|gb|EMC89128.1| hypothetical protein A306_01931 [Columba livia]
Length = 206
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 36/100 (36%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
GG G + GG G +TGG G GG TG G G G +T
Sbjct: 72 GGPGWSRMDMGGPGWSRVDTGGHGWTRVVMGGHEWTQVVTGEHGWSWVVMDGHGWSRMDT 131
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GG G G NTGG G +TGG G T
Sbjct: 132 GGHRRTRVVMDGHGWTQENTGGPGWSRMDTGGHGWTRVVT 171
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 37/101 (36%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G GG G +TGG G +TGG GG G + GG G +
Sbjct: 31 TGGPGWTWVIMGGPGWSRMDTGGSGWSWMDTGGPRWTWVIMGGPGWSRMDMGGPGWSRVD 90
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TGG G GG TG G G G +T
Sbjct: 91 TGGHGWTRVVMGGHEWTQVVTGEHGWSWVVMDGHGWSRMDT 131
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 34/88 (38%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
+TGG G GG G +TGG G +TGG GG G + GG G
Sbjct: 29 MDTGGPGWTWVIMGGPGWSRMDTGGSGWSWMDTGGPRWTWVIMGGPGWSRMDMGGPGWSR 88
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
+TGG G GG TG G
Sbjct: 89 VDTGGHGWTRVVMGGHEWTQVVTGEHGW 116
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 37/102 (36%), Gaps = 10/102 (9%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL------- 55
GG G +TGG G GG TG G G G +TGG
Sbjct: 82 GGPGWSRVDTGGHGWTRVVMGGHEWTQVVTGEHGWSWVVMDGHGWSRMDTGGHRRTRVVM 141
Query: 56 ---GLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGG 94
G NTGG G +TGG G TG G +TGG
Sbjct: 142 DGHGWTQENTGGPGWSRMDTGGHGWTRVVTGDHGWSWMDTGG 183
>gi|307084344|ref|ZP_07493457.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu012]
gi|308366041|gb|EFP54892.1| putative PPE family protein [Mycobacterium tuberculosis SUMu012]
Length = 565
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|385996221|ref|YP_005914519.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339296175|gb|AEJ48286.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 420
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N + GL N G +G N N G+GL N G+G N TG LGL +
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N T GL N
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 2 SGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
S GL N G +G N N G+GL N G+G N TG LGL N TG +G +
Sbjct: 259 SSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNSGTGNIGFFN 318
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
TG G+ N + G+ N T GL N
Sbjct: 319 SGTGNFGVFNSGSYNTGVGNAGTASTGLFNA 349
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Query: 13 GGLGLRNCNTGGLGLRNCNTGGLGLRN--CNTGGLGLRNCNTGGLGLRSCNTGGLGLRNC 70
G +GL N + GL N G +G N N G+GL N G+G + TG LGL N
Sbjct: 250 GNIGLGNAGSSNYGLANLGVGNIGFANTGSNNIGIGLTGDNLTGIGGLNSGTGNLGLFNS 309
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG +G N TG G+ N + G+ N T
Sbjct: 310 GTGNIGFFNSGTGNFGVFNSGSYNTGVGNAGT 341
>gi|306797578|ref|ZP_07435880.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu006]
gi|308342080|gb|EFP30931.1| putative PPE family protein [Mycobacterium tuberculosis SUMu006]
Length = 547
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|1399945|gb|AAB03337.1| RNA helicase GLH-2 [Caenorhabditis elegans]
gi|1405387|gb|AAB03510.1| GLH-2 [Caenorhabditis elegans]
Length = 974
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 50/96 (52%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G + N GG G + N GG G + N GG G + N GG G + N GG G S N
Sbjct: 73 AGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGN 132
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
GG GL + N GG G + N GG G + N GG G
Sbjct: 133 AGGTGLGSGNAGGTGFGSGNAGGTGFGSGNAGGTGF 168
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 45/87 (51%)
Query: 11 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNC 70
N GG G + N GG G + N GG G + N GG G + N GG G S N GG G +
Sbjct: 72 NAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSG 131
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGLGL 97
N GG GL + N GG G + N GG G
Sbjct: 132 NAGGTGLGSGNAGGTGFGSGNAGGTGF 158
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 49/96 (51%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GG G + N GG G + N GG G + N GG G + N GG G + N GG GL S N
Sbjct: 83 AGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGFGSGNAGGTGLGSGN 142
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
GG G + N GG G + N GG G + GG G
Sbjct: 143 AGGTGFGSGNAGGTGFGSGNAGGTGFGSGKAGGTGF 178
>gi|289449036|ref|ZP_06438780.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289421994|gb|EFD19195.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1068
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 564 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 623
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 624 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 672
>gi|344252641|gb|EGW08745.1| Uncharacterized PPE family protein PPE40 [Cricetulus griseus]
Length = 261
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 85 GSLDSTAQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTAQHT 144
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 145 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 177
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 105 GSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHT 164
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 165 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 197
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 95 GSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHT 154
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 155 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSL 187
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 125 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHT 184
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 185 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 217
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 145 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHT 204
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 205 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 237
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 165 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHT 224
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 225 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 257
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 65 GSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHT 124
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 125 GSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSL 157
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 75 GSLDSTAQHTGSLDSTAQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHT 134
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 135 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSL 167
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 115 GSLDSTTQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHT 174
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 175 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSL 207
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 45 GSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTTQHT 104
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 105 GSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSL 137
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 55 GSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTTQHTGSLDSTTQHT 114
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 115 GSLDSTTQHTGSLDSTTQHTGSLDSTAQHTGSL 147
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 135 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHT 194
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 195 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSL 227
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 155 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSLDSTTQHT 214
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 215 GSLDSTAQHTGSLDSTTQHTGSLDSTAQHTGSL 247
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 39/93 (41%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 35 GSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHT 94
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G L +TG L +TG L +TG L
Sbjct: 95 GSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSL 127
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 45/110 (40%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 25 GSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHT 84
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPT 112
G L +TG L +TG L +TG L +T L + T T
Sbjct: 85 GSLDSTAQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHT 134
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 45/110 (40%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L +TG L +TG L +TG L +TG L +TG L + +T
Sbjct: 15 GSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHTGSLDSTAQHT 74
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPT 112
G L +TG L +TG L +TG L +T L + T T
Sbjct: 75 GSLDSTAQHTGSLDSTAQHTGSLDSTTQHTGSLDSTTQHTGSLDSTTQHT 124
>gi|306972055|ref|ZP_07484716.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu010]
gi|308358461|gb|EFP47312.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 572
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|195335161|ref|XP_002034244.1| GM21763 [Drosophila sechellia]
gi|194126214|gb|EDW48257.1| GM21763 [Drosophila sechellia]
Length = 453
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 37/94 (39%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
GG N N GG N GG N N+GG +TGG +TGG +
Sbjct: 201 PGGFEQPNENEGGFQQPGQNNGGFRQPNQNSGGFRQPGQSTGGFQQPGQSTGGFQQPGQS 260
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
TGG +TGG + GG +TGG
Sbjct: 261 TGGFRQPGQSTGGFQQPGQSIGGFQQPGQSTGGF 294
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 34/85 (40%)
Query: 11 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNC 70
N GG N N GG N GG N N+GG +TGG +TGG
Sbjct: 200 NPGGFEQPNENEGGFQQPGQNNGGFRQPNQNSGGFRQPGQSTGGFQQPGQSTGGFQQPGQ 259
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGL 95
+TGG +TGG + GG
Sbjct: 260 STGGFRQPGQSTGGFQQPGQSIGGF 284
>gi|427709068|ref|YP_007051445.1| pentapeptide repeat-containing protein [Nostoc sp. PCC 7107]
gi|427361573|gb|AFY44295.1| pentapeptide repeat protein [Nostoc sp. PCC 7107]
Length = 328
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 32/79 (40%)
Query: 26 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
L++ N G+ L L N G LR N G L+N + LRN N
Sbjct: 100 ALQDLNNDGVSLAGLTADKAYLAGINLKGADLRDANLEGTNLKNACLQEIDLRNANLQQA 159
Query: 86 GLRNCNTGGLGLRNCNTRG 104
LR N G LRN N +G
Sbjct: 160 DLRYANLEGANLRNANLQG 178
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L++ N G+ L L N G LR+ N G L+N + LR+ N
Sbjct: 100 ALQDLNNDGVSLAGLTADKAYLAGINLKGADLRDANLEGTNLKNACLQEIDLRNANLQQA 159
Query: 66 GLRNCNTGGLGLRNCNTGG 84
LR N G LRN N G
Sbjct: 160 DLRYANLEGANLRNANLQG 178
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%)
Query: 16 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGL 75
L++ N G+ L L N G LR+ N G L++ + LRN N
Sbjct: 100 ALQDLNNDGVSLAGLTADKAYLAGINLKGADLRDANLEGTNLKNACLQEIDLRNANLQQA 159
Query: 76 GLRNCNTGGLGLRNCNTGG 94
LR N G LRN N G
Sbjct: 160 DLRYANLEGANLRNANLQG 178
>gi|306793197|ref|ZP_07431499.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu005]
gi|308338373|gb|EFP27224.1| putative PPE family protein [Mycobacterium tuberculosis SUMu005]
Length = 576
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|298525254|ref|ZP_07012663.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495048|gb|EFI30342.1| predicted protein [Mycobacterium tuberculosis 94_M4241A]
Length = 585
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|428225932|ref|YP_007110029.1| pentapeptide repeat-containing protein [Geitlerinema sp. PCC 7407]
gi|427985833|gb|AFY66977.1| pentapeptide repeat protein [Geitlerinema sp. PCC 7407]
Length = 180
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 39/100 (39%), Gaps = 5/100 (5%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L N LR + G LR N G L+ N G LRN N G L + G
Sbjct: 65 LSKSNLYSAKLRGSDLGLANLREANLGDADLKQSNLRGADLRNANLLGASLIEADLRGAD 124
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
LR+ N L N N G LR N G L + RG V
Sbjct: 125 LRDAN-----LTNANLDGADLRQTNLQGAVLTGVSFRGAV 159
>gi|289445006|ref|ZP_06434750.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289417925|gb|EFD15165.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 544
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 87 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 146
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 147 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 195
>gi|427415458|ref|ZP_18905642.1| putative low-complexity protein [Leptolyngbya sp. PCC 7375]
gi|425756291|gb|EKU97147.1| putative low-complexity protein [Leptolyngbya sp. PCC 7375]
Length = 355
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 34/87 (39%)
Query: 17 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLG 76
LR N G L N G L N G L N N L + N G+ LR N G
Sbjct: 220 LRGANLRGAILYEANLRGANLVKANLEGAHLFNANLENATLNALNLEGMDLRATNLKGAH 279
Query: 77 LRNCNTGGLGLRNCNTGGLGLRNCNTR 103
L N N G L N N G LR N +
Sbjct: 280 LFNANLEGADLFNANLKGANLREANLK 306
>gi|289571575|ref|ZP_06451802.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289545329|gb|EFD48977.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 2045
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1012 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 1071
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1072 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1120
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1588 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 1647
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1648 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 1696
>gi|196043410|ref|ZP_03110648.1| acetyltransferase, GNAT family [Bacillus cereus 03BB108]
gi|196025719|gb|EDX64388.1| acetyltransferase, GNAT family [Bacillus cereus 03BB108]
Length = 308
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L+N + G +RN N + NCN RN N + N G GG
Sbjct: 190 VNLKNSSFVGSNIRNMN-----MSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGG 244
Query: 65 LGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ ++ + G + NC+ G + N N + + NC+ G+
Sbjct: 245 VQFKDTSLGDEKEPILFDNCDLQGSVIHNSNLKKIEIENCDIAGM 289
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG----L 65
N + + NCN RN N + N G GG+ + + G +
Sbjct: 200 SNIRNMNMSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGGVQFKDTSLGDEKEPI 259
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NC+ G + N N + + NC+ G+ + L+A
Sbjct: 260 LFDNCDLQGSVIHNSNLKKIEIENCDIAGMKVNGIPMEKLLA 301
>gi|289752044|ref|ZP_06511422.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692631|gb|EFD60060.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 619
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 162 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIVSTGLFNAGGFNTGVVNAG 221
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 222 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 270
>gi|225864374|ref|YP_002749752.1| acetyltransferase, GNAT family [Bacillus cereus 03BB102]
gi|225788337|gb|ACO28554.1| acetyltransferase, GNAT family [Bacillus cereus 03BB102]
Length = 308
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L+N + G +RN N + NCN RN N + N G GG
Sbjct: 190 VNLKNSSFVGSNIRNMN-----MSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGG 244
Query: 65 LGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ ++ + G + NC+ G + N N + + NC+ G+
Sbjct: 245 VQFKDTSLGDEKEPILFDNCDLQGSVIHNSNLKKIEIENCDIAGM 289
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 34/92 (36%), Gaps = 4/92 (4%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG----L 65
N + + NCN RN N + N G GG+ + + G +
Sbjct: 200 SNIRNMNMSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGGVQFKDTSLGDEKEPI 259
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL 97
NC+ G + N N + + NC+ G+ +
Sbjct: 260 LFDNCDLQGSVIHNSNLKKIEIENCDIAGMKV 291
>gi|306968018|ref|ZP_07480679.1| hypothetical protein TMIG_02163, partial [Mycobacterium
tuberculosis SUMu009]
gi|308354358|gb|EFP43209.1| hypothetical protein TMIG_02163 [Mycobacterium tuberculosis
SUMu009]
Length = 514
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 316 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 375
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 376 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 424
>gi|228985499|ref|ZP_04145656.1| Acetyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
gi|228774264|gb|EEM22673.1| Acetyltransferase [Bacillus thuringiensis serovar tochigiensis BGSC
4Y1]
Length = 303
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 9/105 (8%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L+N + G +RN N + NCN RN N + N G GG
Sbjct: 185 VNLKNSSFVGSNIRNMN-----MSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGG 239
Query: 65 LGLRNCNTGG----LGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ ++ + G + NC+ G + N N + + NC+ G+
Sbjct: 240 VQFKDTSLGDEKEPILFDNCDLQGSVIHNSNLKNIEIENCDITGM 284
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 37/102 (36%), Gaps = 4/102 (3%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG----L 65
N + + NCN RN N + N G GG+ + + G +
Sbjct: 195 SNIRNMNMSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGGVQFKDTSLGDEKEPI 254
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NC+ G + N N + + NC+ G+ + L+A
Sbjct: 255 LFDNCDLQGSVIHNSNLKNIEIENCDITGMKINGIPIEKLLA 296
>gi|306803629|ref|ZP_07440297.1| hypothetical protein TMHG_01093, partial [Mycobacterium
tuberculosis SUMu008]
gi|308349719|gb|EFP38570.1| hypothetical protein TMHG_01093 [Mycobacterium tuberculosis
SUMu008]
Length = 536
Score = 37.7 bits (86), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 337 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 396
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 397 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 445
>gi|306779924|ref|ZP_07418261.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308327166|gb|EFP16017.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 538
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 342 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 401
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 402 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 450
>gi|306808203|ref|ZP_07444871.1| hypothetical protein TMGG_00459, partial [Mycobacterium
tuberculosis SUMu007]
gi|308345416|gb|EFP34267.1| hypothetical protein TMGG_00459 [Mycobacterium tuberculosis
SUMu007]
Length = 897
Score = 37.7 bits (86), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 683 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 742
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 743 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 791
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 20 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 79
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 80 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 132
>gi|308380227|ref|ZP_07489132.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu011]
gi|308362191|gb|EFP51042.1| putative PPE family protein [Mycobacterium tuberculosis SUMu011]
Length = 1102
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|385994751|ref|YP_005913049.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339294705|gb|AEJ46816.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 710
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
>gi|427419363|ref|ZP_18909546.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7375]
gi|425762076|gb|EKV02929.1| serine/threonine protein kinase [Leptolyngbya sp. PCC 7375]
Length = 537
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 28/69 (40%)
Query: 33 GGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 92
G LR+CN G L N N LR CN L N G + L N + G L N
Sbjct: 434 AGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSRSNL 493
Query: 93 GGLGLRNCN 101
G L+ N
Sbjct: 494 AGANLKGVN 502
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 28/69 (40%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G LR+CN G L N N LR CN L N G + L N + G L N
Sbjct: 434 AGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSRSNL 493
Query: 63 GGLGLRNCN 71
G L+ N
Sbjct: 494 AGANLKGVN 502
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 28/69 (40%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNT 82
G LR+CN G L N N LR CN L + G + L N + G L N
Sbjct: 434 AGAQLRDCNLQGADLTNTNLSKADLRQCNLKNAKLSNAYMGEVNLENSDLRGANLSRSNL 493
Query: 83 GGLGLRNCN 91
G L+ N
Sbjct: 494 AGANLKGVN 502
>gi|308231985|ref|ZP_07414480.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu001]
gi|308215384|gb|EFO74783.1| PPE family protein [Mycobacterium tuberculosis SUMu001]
Length = 1106
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|308379078|ref|ZP_07484913.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu010]
gi|308358264|gb|EFP47115.1| putative PPE family protein [Mycobacterium tuberculosis SUMu010]
Length = 1108
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|308370862|ref|ZP_07422988.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308330609|gb|EFP19460.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 568
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 355 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 414
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 415 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 463
>gi|326428608|gb|EGD74178.1| hypothetical protein PTSG_06186 [Salpingoeca sp. ATCC 50818]
Length = 927
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 10/104 (9%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
+ NC+ G L C+ L +CN G L N N L+ C+ G LR N
Sbjct: 685 DMSNCDLQGHDLSGCDLTECNLTSCNLQGANLYNANMQDATLKACSLLGANLREAN---- 740
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTRG 104
L NC+ LR + LRN N G L + C+ RG
Sbjct: 741 -LNNCDMHMHDLRATDLSDANLRNTNLWGANLEDACLSSCDLRG 783
>gi|148822960|ref|YP_001287714.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|297634310|ref|ZP_06952090.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|297731297|ref|ZP_06960415.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
gi|313658629|ref|ZP_07815509.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
gi|148721487|gb|ABR06112.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 975
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|183980666|ref|YP_001848957.1| PPE family protein [Mycobacterium marinum M]
gi|183173992|gb|ACC39102.1| PPE family protein [Mycobacterium marinum M]
Length = 2403
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRSC 60
G G N +G +GL N T +G N TG G+ N + G N +TG +
Sbjct: 326 GFGSLNSGSGNIGLFNSGTNNIGFFNSGTGNFGVLNSGSYNTGFGNSGEASTGVFNPGNA 385
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG N NTG N NTGG N NTG + +T ++
Sbjct: 386 NTGWANTGNHNTGSFNAGNTNTGGFNPGNLNTGWANTGDVDTGAFIS 432
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG +GL N T +G+ N TG G+ N + G+ N NTG + N NTG
Sbjct: 767 SGNIGLFNSGTDNVGIGNSGTGNSGIGNTGSYNTGIGNVGVANTGLFNIGNLNTGIGNPG 826
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
+ N+G + + NTGG + NTG L L + NTG + N NT L++
Sbjct: 827 NYNSGAHNVGSTNTGGANQGDYNTGWLNLGDYNTGLANVGNVNTGALIS 875
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN---CNTGGLGLRNCNTGGLGLR 58
SG +GL N T +G N TG G+ N + G N +TG N NTG
Sbjct: 334 SGNIGLFNSGTNNIGFFNSGTGNFGVLNSGSYNTGFGNSGEASTGVFNPGNANTGWANTG 393
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+ NTG N NTGG N NTG + +TG
Sbjct: 394 NHNTGSFNAGNTNTGGFNPGNLNTGWANTGDVDTGAF 430
>gi|422812913|ref|ZP_16861297.1| PPE family protein, partial [Mycobacterium tuberculosis CDC1551A]
gi|323719535|gb|EGB28660.1| PPE family protein [Mycobacterium tuberculosis CDC1551A]
Length = 1157
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|253799205|ref|YP_003032206.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|375296455|ref|YP_005100722.1| hypothetical protein TBSG_02254 [Mycobacterium tuberculosis KZN
4207]
gi|392432665|ref|YP_006473709.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253320708|gb|ACT25311.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458960|gb|AEB04383.1| hypothetical protein TBSG_02254 [Mycobacterium tuberculosis KZN
4207]
gi|392054074|gb|AFM49632.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 1025
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|306789030|ref|ZP_07427352.1| hypothetical protein TMDG_03949, partial [Mycobacterium
tuberculosis SUMu004]
gi|308334436|gb|EFP23287.1| hypothetical protein TMDG_03949 [Mycobacterium tuberculosis
SUMu004]
Length = 1020
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 683 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 742
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 743 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 791
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 20 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 79
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 80 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 132
>gi|308373272|ref|ZP_07431668.2| hypothetical protein TMEG_01810, partial [Mycobacterium
tuberculosis SUMu005]
gi|308338231|gb|EFP27082.1| hypothetical protein TMEG_01810 [Mycobacterium tuberculosis
SUMu005]
Length = 587
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 373 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 432
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 433 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 481
>gi|254550768|ref|ZP_05141215.1| PPE family protein [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|385998529|ref|YP_005916827.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344219575|gb|AEN00206.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|379027990|dbj|BAL65723.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1000
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|183981049|ref|YP_001849340.1| PPE family protein [Mycobacterium marinum M]
gi|183174375|gb|ACC39485.1| PPE family protein [Mycobacterium marinum M]
Length = 1398
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 46/112 (41%), Gaps = 13/112 (11%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-------------NTGGLGLRN 49
G GL N TG +GL N TG G+ N G GL N NTG L + N
Sbjct: 323 GNFGLFNSGTGNVGLFNSGTGNFGIGNSGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGN 382
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
NTG L S N G NTG L NTG + NTG + + N
Sbjct: 383 ANTGSLNTGSFNMGSFNPGPSNTGALNTGTANTGWFNTGSLNTGAFNIGDMN 434
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Query: 2 SGGLGLRNC--NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
SG G N N G+GL N G+G N G GL N TG +GL N TG G+ +
Sbjct: 290 SGNFGFANTGNNNIGIGLTGDNQVGIGGLNSGVGNFGLFNSGTGNVGLFNSGTGNFGIGN 349
Query: 60 CNTGGLGLRN---CNTGGLGLRNCNTGGLGLRNCNTGGL 95
G GL N NTG L + NTG L + N NTG L
Sbjct: 350 SGAYGTGLFNSGQANTGLLNAGSFNTGLLDVGNANTGSL 388
>gi|297731471|ref|ZP_06960589.1| PPE family protein [Mycobacterium tuberculosis KZN R506]
Length = 1365
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 882 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 941
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 942 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 990
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 196 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 255
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 256 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 293
>gi|434405193|ref|YP_007148078.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
gi|428259448|gb|AFZ25398.1| putative low-complexity protein [Cylindrospermum stagnale PCC 7417]
Length = 576
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 38/105 (36%), Gaps = 5/105 (4%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L N L + G LRN + L N + L + N G L N G
Sbjct: 70 DLYQANLSSADLEGADLSGADLRNTDLSSAKLFRANLFRVDLGSANLSGADLSGVNLSGA 129
Query: 66 GLRNCNTGGLGLRN-----CNTGGLGLRNCNTGGLGLRNCNTRGL 105
LRN N L N N G+ N N G+ L N N RG+
Sbjct: 130 DLRNANLSSTNLSNADLNGVNLSGVNFSNANLRGVRLDNVNLRGV 174
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G LRN N L N + G+ L G+ N N G+ L N N G+ L +
Sbjct: 127 SGADLRNANLSSTNLSNADLNGVNL-----SGVNFSNANLRGVRLDNVNLRGVNLNGVDL 181
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
+ LRN N G+ N L N G+ LRN
Sbjct: 182 SDVDLRNFNFNGVSFNGVNLSRANLNGFNLRGVELRN 218
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G+ N N G+ L N N G+ L + + LRN N G+ N L N
Sbjct: 152 SGVNFSNANLRGVRLDNVNLRGVNLNGVDLSDVDLRNFNFNGVSFNGVNLSRANLNGFNL 211
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ LRN N L+N + L N G L + + RG
Sbjct: 212 RGVELRNGNLSYANLQNADLSNAQLNGANLQGANLYSADLRG 253
>gi|254364588|ref|ZP_04980634.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150102|gb|EBA42147.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length = 1050
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|253799036|ref|YP_003032037.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|375296286|ref|YP_005100553.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392432499|ref|YP_006473543.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
gi|253320539|gb|ACT25142.1| PPE family protein [Mycobacterium tuberculosis KZN 1435]
gi|328458791|gb|AEB04214.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
gi|392053908|gb|AFM49466.1| PPE family protein [Mycobacterium tuberculosis KZN 605]
Length = 1399
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|347828477|emb|CCD44174.1| hypothetical protein [Botryotinia fuckeliana]
Length = 503
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 19/116 (16%)
Query: 10 CNTGGLGLRNCNTGGL-GLR------NCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRS 59
CN G +++C + G R NC+ G +R+C RNC G +
Sbjct: 293 CNELGHTVKHCTEERVDGERVQVQCFNCSEIGHRVRDCPIPREDKFACRNCKKSGHSSKE 352
Query: 60 C----NTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLGLRNC-NTRGLV 106
C + G+ +NCN G R+C TGG G RNCN G ++C N R ++
Sbjct: 353 CPEPRSAEGVECKNCNEIGHFSRDCPTGGGGDGGLCRNCNQPGHRAKDCTNERVMI 408
>gi|385998693|ref|YP_005916991.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
gi|344219739|gb|AEN00370.1| PPE family protein [Mycobacterium tuberculosis CTRI-2]
Length = 1388
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1013
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 219 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 278
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 279 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 316
>gi|341601679|emb|CCC64352.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
Length = 976
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|289576075|ref|ZP_06456302.1| predicted protein [Mycobacterium tuberculosis K85]
gi|289540506|gb|EFD45084.1| predicted protein [Mycobacterium tuberculosis K85]
Length = 420
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G+G N TG +GL N TG +G N T GL N + G+ +
Sbjct: 291 GIGLTGDNQSGIGGLNSGTGNIGLFNSGTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVA 350
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + NTG + NTGG + NT
Sbjct: 351 STGLVNAGGFNTGVANAGSYNTGSFNAGDTNTGGFNPGSTNT 392
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +GL N +G +G N G +G N T G+GL N G+G N TG +GL +
Sbjct: 258 GNIGLGNAGSGNVGWANMGLGNIGFGNTGTNNLGIGLTGDNQSGIGGLNSGTGNIGLFNS 317
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N T GL N + G+ N GL N
Sbjct: 318 GTGNIGFFNSGTANFGLFNSGSYNTGIGNSGVASTGLVNA 357
>gi|297634483|ref|ZP_06952263.1| PPE family protein [Mycobacterium tuberculosis KZN 4207]
Length = 1388
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1013
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 219 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 278
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 279 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 316
>gi|449063817|ref|YP_007430900.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|449032325|gb|AGE67752.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1001
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|313658804|ref|ZP_07815684.1| PPE family protein [Mycobacterium tuberculosis KZN V2475]
Length = 1399
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|306797742|ref|ZP_07436044.1| hypothetical protein TMFG_01000, partial [Mycobacterium
tuberculosis SUMu006]
gi|308341936|gb|EFP30787.1| hypothetical protein TMFG_01000 [Mycobacterium tuberculosis
SUMu006]
Length = 703
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 324 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 383
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 384 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 432
>gi|194882293|ref|XP_001975246.1| GG20667 [Drosophila erecta]
gi|190658433|gb|EDV55646.1| GG20667 [Drosophila erecta]
Length = 482
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 38/94 (40%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
SGG N N GG ++GG N+GG N+GG ++ G N
Sbjct: 206 SGGFQQPNENPGGFPQPGQSSGGFRQPGQNSGGFRQPGQNSGGFQQPGQSSVGFQQPGQN 265
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
+GG N+GG N+G L N+GG
Sbjct: 266 SGGFQQPGQNSGGFQQPGQNSGELQQPGQNSGGF 299
>gi|121637661|ref|YP_977884.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990136|ref|YP_002644823.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378771495|ref|YP_005171228.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|121493308|emb|CAL71779.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773249|dbj|BAH26055.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|356593816|gb|AET19045.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
Length = 1026
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|31792941|ref|NP_855434.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618532|emb|CAD94484.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 1051
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|408784836|ref|ZP_11196586.1| hypothetical protein C241_00050 [Rhizobium lupini HPC(L)]
gi|408489175|gb|EKJ97479.1| hypothetical protein C241_00050 [Rhizobium lupini HPC(L)]
Length = 111
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 30/87 (34%)
Query: 27 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLG 86
+ N G N N G N N G N G + + N GL L N N G
Sbjct: 22 FNDVNLSGTVFDNVNLSGASFNNINLSGASFTDNNMSGWSIDDVNFSGLKLSNSNLSGAQ 81
Query: 87 LRNCNTGGLGLRNCNTRGLVAFTGPTQ 113
+ +C G+ + L+A Q
Sbjct: 82 ITSCRMTGMKIDGIPVEDLMAAYKAAQ 108
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 25/65 (38%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G N N G N N G + N G + + N GL L N N G + SC
Sbjct: 28 SGTVFDNVNLSGASFNNINLSGASFTDNNMSGWSIDDVNFSGLKLSNSNLSGAQITSCRM 87
Query: 63 GGLGL 67
G+ +
Sbjct: 88 TGMKI 92
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 26/71 (36%)
Query: 17 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLG 76
+ N G N N G N N G + N G + N GL L N N G
Sbjct: 22 FNDVNLSGTVFDNVNLSGASFNNINLSGASFTDNNMSGWSIDDVNFSGLKLSNSNLSGAQ 81
Query: 77 LRNCNTGGLGL 87
+ +C G+ +
Sbjct: 82 ITSCRMTGMKI 92
>gi|379028170|dbj|BAL65903.1| PPE family protein [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
Length = 1228
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 941 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1000
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1001 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1049
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|54022634|ref|YP_116876.1| histidine kinase [Nocardia farcinica IFM 10152]
gi|54014142|dbj|BAD55512.1| putative histidine kinase [Nocardia farcinica IFM 10152]
Length = 1268
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 36/98 (36%), Gaps = 1/98 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+ GL R GL R GL R GG+ R+ GL R GL R
Sbjct: 914 AAGLPPREGGPSGLPQREAGPNGLPQRGAPAGGIPPRDGGPSGLPQREAGPNGLPQRGAA 973
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN 99
GGL R GL R+ GL R GL R+
Sbjct: 974 PGGLPQRE-GAAGLAPRDGGAPGLPQREGGATGLPPRD 1010
>gi|66802546|ref|XP_635145.1| BTB/POZ domain-containing protein [Dictyostelium discoideum AX4]
gi|60463464|gb|EAL61649.1| BTB/POZ domain-containing protein [Dictyostelium discoideum AX4]
Length = 488
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 35/112 (31%), Gaps = 10/112 (8%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
L LRN N + N L N L N G LR N G L C
Sbjct: 336 SKLDLRNINFKMTNFKETNLSKCNLDNALLQEADLSGANLTGASLRGSNLTGANLEDCIL 395
Query: 63 GGLG----------LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G L N N L N G LR CN L NCN RG
Sbjct: 396 KGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFKSANLENCNFRG 447
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 36/103 (34%), Gaps = 5/103 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G LR N G L +C G + L N N L N G LR CN
Sbjct: 377 GASLRGSNLTGANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRVCNFK 436
Query: 64 GLGLRNCNT-----GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L NCN G L CN G L N G+ L+ N
Sbjct: 437 SANLENCNFRGADLAGANLEKCNFRGANLHKANLIGVNLKGAN 479
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
N G LR N G L +C G + L N N L N G LR
Sbjct: 373 ANLTGASLRGSNLTGANLEDCILKGANFEDRGGQRATLENVNFKNASLEEANFSGANLRV 432
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
CN L NCN R + G L CN RG
Sbjct: 433 CNFKSANLENCN-----FRGADLAGANLEKCNFRG 462
>gi|308380656|ref|ZP_07669237.1| hypothetical protein TMKG_02605 [Mycobacterium tuberculosis
SUMu011]
gi|308360810|gb|EFP49661.1| hypothetical protein TMKG_02605 [Mycobacterium tuberculosis
SUMu011]
Length = 551
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 3/104 (2%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCNTG 63
+ N TG +G N TG G+ N + G+ N GL N NTG + S NTG
Sbjct: 1 MFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTG 60
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTGG + NTG L + NTG + NT ++
Sbjct: 61 SFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 104
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 432 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 491
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 492 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 522
>gi|254231946|ref|ZP_04925273.1| PPE family protein [Mycobacterium tuberculosis C]
gi|124601005|gb|EAY60015.1| PPE family protein [Mycobacterium tuberculosis C]
Length = 1078
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|386004714|ref|YP_005922993.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|380725202|gb|AFE12997.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
Length = 1053
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|254550933|ref|ZP_05141380.1| PPE family protein [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
Length = 1388
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1013
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 219 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 278
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 279 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 316
>gi|392386573|ref|YP_005308202.1| PPE34 [Mycobacterium tuberculosis UT205]
gi|378545124|emb|CCE37400.1| PPE34 [Mycobacterium tuberculosis UT205]
Length = 1445
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
>gi|289762071|ref|ZP_06521449.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
gi|289709577|gb|EFD73593.1| PPE family protein [Mycobacterium tuberculosis GM 1503]
Length = 1422
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
>gi|15841389|ref|NP_336426.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881624|gb|AAK46240.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length = 1491
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 916 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 975
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 976 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1024
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 327
>gi|254232092|ref|ZP_04925419.1| PPE family protein [Mycobacterium tuberculosis C]
gi|124601151|gb|EAY60161.1| PPE family protein [Mycobacterium tuberculosis C]
Length = 1436
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 907 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 966
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 967 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1015
Score = 34.3 bits (77), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 196 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 255
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 256 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 293
>gi|148823129|ref|YP_001287883.1| PPE family protein [Mycobacterium tuberculosis F11]
gi|148721656|gb|ABR06281.1| PPE family protein [Mycobacterium tuberculosis F11]
Length = 1457
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 905 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 964
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 965 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1013
>gi|7478714|pir||B70520 probable PPE protein - Mycobacterium tuberculosis (strain H37RV)
Length = 1436
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 907 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 966
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 967 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1015
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 196 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 255
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 256 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 293
>gi|289757864|ref|ZP_06517242.1| predicted protein [Mycobacterium tuberculosis T85]
gi|289713428|gb|EFD77440.1| predicted protein [Mycobacterium tuberculosis T85]
Length = 979
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
>gi|289753844|ref|ZP_06513222.1| predicted protein [Mycobacterium tuberculosis EAS054]
gi|289694431|gb|EFD61860.1| predicted protein [Mycobacterium tuberculosis EAS054]
Length = 1012
Score = 36.6 bits (83), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 186 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 245
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 246 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 288
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 168 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 227
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 228 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 269
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 206 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 265
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 266 NANTGFLNAGNINTGVFNIGHMNNG 290
>gi|57116904|ref|YP_177830.1| PPE family protein PPE24 [Mycobacterium tuberculosis H37Rv]
gi|148661552|ref|YP_001283075.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397673616|ref|YP_006515151.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|81415779|sp|Q79FL2.1|PPE24_MYCTU RecName: Full=Uncharacterized PPE family protein PPE24
gi|148505704|gb|ABQ73513.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395138521|gb|AFN49680.1| PPE family protein [Mycobacterium tuberculosis H37Rv]
gi|444895263|emb|CCP44519.1| PPE family protein PPE24 [Mycobacterium tuberculosis H37Rv]
Length = 1053
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|386004866|ref|YP_005923145.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
gi|380725354|gb|AFE13149.1| PPE family protein [Mycobacterium tuberculosis RGTB423]
Length = 1459
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 930 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 989
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 990 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1038
>gi|281208859|gb|EFA83034.1| BTB/POZ domain-containing protein [Polysphondylium pallidum PN500]
Length = 1312
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 36/112 (32%), Gaps = 10/112 (8%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
L LRN N R N L N L N G LR N G L C
Sbjct: 1149 SKLDLRNINFKMTNFRETNLSKCNLDNALLQEADLSYANLCGASLRGANLSGANLEHCIL 1208
Query: 63 GG----------LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G L +CN L N G LR N G L NCN RG
Sbjct: 1209 KGTNFEDRGGQRATLESCNFKNAILEEANFSGANLRVANFKGANLENCNFRG 1260
>gi|57116928|ref|YP_177655.1| PPE family protein PPE34 [Mycobacterium tuberculosis H37Rv]
gi|148661725|ref|YP_001283248.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|397673785|ref|YP_006515320.1| hypothetical protein RVBD_1917c [Mycobacterium tuberculosis H37Rv]
gi|148505877|gb|ABQ73686.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
gi|395138690|gb|AFN49849.1| hypothetical protein RVBD_1917c [Mycobacterium tuberculosis H37Rv]
gi|444895427|emb|CCP44684.1| PPE family protein PPE34 [Mycobacterium tuberculosis H37Rv]
Length = 1459
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 930 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 989
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 990 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1038
>gi|289745807|ref|ZP_06505185.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
gi|289686335|gb|EFD53823.1| PPE family protein [Mycobacterium tuberculosis 02_1987]
Length = 1053
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|167970407|ref|ZP_02552684.1| PPE family protein [Mycobacterium tuberculosis H37Ra]
Length = 1470
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 941 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1000
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1001 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1049
>gi|254364736|ref|ZP_04980782.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
gi|134150250|gb|EBA42295.1| PPE family protein [Mycobacterium tuberculosis str. Haarlem]
Length = 1574
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 907 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 966
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 967 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1015
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 196 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 255
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 256 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTS 293
>gi|385991141|ref|YP_005909439.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339298334|gb|AEJ50444.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 1053
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|294996832|ref|ZP_06802523.1| PPE family protein [Mycobacterium tuberculosis 210]
Length = 670
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 287 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 346
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 347 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 395
>gi|289443216|ref|ZP_06432960.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289416135|gb|EFD13375.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 1152
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 324 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 383
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 384 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 426
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 306 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 365
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 366 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 407
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 344 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 403
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 404 NANTGFLNAGNINTGVFNIGHMNNG 428
>gi|306799309|ref|ZP_07437611.1| hypothetical protein TMFG_04033, partial [Mycobacterium
tuberculosis SUMu006]
gi|308340500|gb|EFP29351.1| hypothetical protein TMFG_04033 [Mycobacterium tuberculosis
SUMu006]
Length = 456
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRSCN 61
+GL N TG +G N TG G+ N + G+ N GL N NTG + S N
Sbjct: 2 VGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYN 61
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
TG NTGG + NTG L + NTG + NT ++
Sbjct: 62 TGSFNAGQANTGGFNPGSVNTGWLNTGDTNTGVANSGDVNTGAFIS 107
>gi|260841809|ref|XP_002614103.1| hypothetical protein BRAFLDRAFT_57239 [Branchiostoma floridae]
gi|229299493|gb|EEN70112.1| hypothetical protein BRAFLDRAFT_57239 [Branchiostoma floridae]
Length = 410
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRSCN 61
L N G+ + N G +R CN GLR CN G+ L GG+ LR
Sbjct: 291 LEGANLQGVKMVCANLEGASMRGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVAT 350
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L+NCN LR G L NCN G L++ N RG
Sbjct: 351 LKNASLQNCN-----LRGAILAGTDLENCNLTGCDLQDANLRG 388
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 43/114 (37%), Gaps = 10/114 (8%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGL 57
L LR N N + G L +C+ L N G+ + N G +
Sbjct: 252 SKLDLRYINFKQANFHNADLSGANLASCSLERADLSKAVLEGANLQGVKMVCANLEGASM 311
Query: 58 RSCN-TGGLGLRN----CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
R CN GLR CN G+ L GG+ LR L+NCN RG +
Sbjct: 312 RGCNFEDPTGLRANMEGCNMKGVDLECSQMGGVNLRVATLKNASLQNCNLRGAI 365
>gi|440581222|emb|CCG11625.1| PPE FAMILY protein [Mycobacterium tuberculosis 7199-99]
Length = 1129
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|289574424|ref|ZP_06454651.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289538855|gb|EFD43433.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 1104
Score = 36.6 bits (83), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|283956282|ref|ZP_06373762.1| pentapeptide repeat family protein [Campylobacter jejuni subsp.
jejuni 1336]
gi|283792002|gb|EFC30791.1| pentapeptide repeat family protein [Campylobacter jejuni subsp.
jejuni 1336]
Length = 180
Score = 36.2 bits (82), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 10/83 (12%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-----CNTGGLGL 57
G+ L N N L N N GL N G +N N + +N CN G
Sbjct: 30 EGISLNNAN-----LENINLSGLDFDNAFINGASFKNSNLNDISSKNASFIDCNFSGASF 84
Query: 58 RSCNTGGLGLRNCNTGGLGLRNC 80
CN NC + LR+C
Sbjct: 85 HFCNFLRTEFENCIFENVDLRDC 107
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
+ C G+ L N N L N N GL N G +N N L ++
Sbjct: 24 VEYCILEGISLNNAN-----LENINLSGLDFDNAFINGASFKNSN-----LNDISSKNAS 73
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+CN G CN NC + LR+C
Sbjct: 74 FIDCNFSGASFHFCNFLRTEFENCIFENVDLRDC 107
>gi|15841218|ref|NP_336255.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
gi|13881441|gb|AAK46069.1| PPE family protein [Mycobacterium tuberculosis CDC1551]
Length = 1105
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|338972760|ref|ZP_08628131.1| hypothetical protein CSIRO_1202 [Bradyrhizobiaceae bacterium
SG-6C]
gi|414169709|ref|ZP_11425442.1| hypothetical protein HMPREF9696_03297 [Afipia clevelandensis ATCC
49720]
gi|338233921|gb|EGP09040.1| hypothetical protein CSIRO_1202 [Bradyrhizobiaceae bacterium
SG-6C]
gi|410885441|gb|EKS33256.1| hypothetical protein HMPREF9696_03297 [Afipia clevelandensis ATCC
49720]
Length = 88
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 25 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGG 84
L ++N + G + N G + N N GL + N GL + N N G L +C G
Sbjct: 10 LDVKNSDVSGSVFDDVNMSGCTMHNINLSGLRIDYANLAGLHVNNANMAGASLTDCRIEG 69
Query: 85 LGL 87
+ +
Sbjct: 70 MTI 72
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 26/61 (42%)
Query: 45 LGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L ++N + G N G + N N GL + N GL + N N G L +C G
Sbjct: 10 LDVKNSDVSGSVFDDVNMSGCTMHNINLSGLRIDYANLAGLHVNNANMAGASLTDCRIEG 69
Query: 105 L 105
+
Sbjct: 70 M 70
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 27/63 (42%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L ++N + G + N G + N N GL + N GL + N N G L C G
Sbjct: 10 LDVKNSDVSGSVFDDVNMSGCTMHNINLSGLRIDYANLAGLHVNNANMAGASLTDCRIEG 69
Query: 65 LGL 67
+ +
Sbjct: 70 MTI 72
>gi|289447533|ref|ZP_06437277.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
gi|289420491|gb|EFD17692.1| PPE family protein [Mycobacterium tuberculosis CPHL_A]
Length = 1346
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1086 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1145
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1146 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1194
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 10 CNTGGLGLRNCNTGG--LGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGL 65
N G L L + N GG GL N + +GL N G +G N G G GL N G
Sbjct: 230 ANLGILNLGSLNPGGNNFGLGNVGSNNVGLGNTGNGNIGFGNTGNGNIGFGLTGDNQQGF 289
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G N TG +GL N TG +G+ N TG G+ N T
Sbjct: 290 GGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSATS 327
>gi|427781151|gb|JAA56027.1| Putative potassium channel tetramerisation domain protein
[Rhipicephalus pulchellus]
Length = 278
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 33/85 (38%)
Query: 20 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRN 79
N LR+CN + N G+ L++ + G + N L+N N LR
Sbjct: 173 ANMEAAHLRSCNMEDPAGNSANLEGVNLKDADLDGSQMAGVNLRVATLKNANLQNCHLRQ 232
Query: 80 CNTGGLGLRNCNTGGLGLRNCNTRG 104
G L NCN G L N RG
Sbjct: 233 AILAGADLENCNLSGSDLHEANLRG 257
>gi|427719961|ref|YP_007067955.1| pentapeptide repeat-containing protein [Calothrix sp. PCC 7507]
gi|427352397|gb|AFY35121.1| pentapeptide repeat protein [Calothrix sp. PCC 7507]
Length = 256
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 42/106 (39%), Gaps = 7/106 (6%)
Query: 8 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGL 67
+NC+ G GL + G L N G L N G LR N G GL N G L
Sbjct: 39 QNCDLTGAGLVLADLSGANLSGANLAGANLSRANLSGADLRGANFSGAGLFGVNLSGAKL 98
Query: 68 RNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVAFTGPTQ 113
N G LRN L N G+ L + N +G + PTQ
Sbjct: 99 SGANLAGADLRNTY-----LVNAELNGVNLNSTNLQGAIGI--PTQ 137
>gi|424804093|ref|ZP_18229524.1| PPE family protein [Mycobacterium tuberculosis W-148]
gi|326903369|gb|EGE50302.1| PPE family protein [Mycobacterium tuberculosis W-148]
Length = 1129
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
>gi|440581388|emb|CCG11791.1| PPE FAMILY protein PPE34 [Mycobacterium tuberculosis 7199-99]
Length = 1666
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 930 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 989
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 990 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1038
>gi|289750313|ref|ZP_06509691.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289690900|gb|EFD58329.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1053
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 225 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 284
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 285 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 327
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 245 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 304
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 305 NANTGFLNAGNINTGVFNIGHMNNG 329
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 207 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 266
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 267 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 308
>gi|390438771|ref|ZP_10227211.1| hypothetical protein MICAI_1870007 [Microcystis sp. T1-4]
gi|389837816|emb|CCI31335.1| hypothetical protein MICAI_1870007 [Microcystis sp. T1-4]
Length = 1053
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+ L++ N G+ + N + L+N N G L+N G L G LR +
Sbjct: 246 GVNLKSANLPGVDMPNNDLSKAQLQNANLDGANLKNAYLDGADL-----TGASLRKADLT 300
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
G LR N + L N G + N N G L N + R
Sbjct: 301 GADLRGTNLQDVNLSNAILNGANITNANLEGANLSNADLR 340
>gi|449063984|ref|YP_007431067.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
gi|449032492|gb|AGE67919.1| PPE family protein [Mycobacterium bovis BCG str. Korea 1168P]
Length = 1665
Score = 36.2 bits (82), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1002 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1061
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1062 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1110
>gi|260789675|ref|XP_002589871.1| hypothetical protein BRAFLDRAFT_235822 [Branchiostoma floridae]
gi|229275055|gb|EEN45882.1| hypothetical protein BRAFLDRAFT_235822 [Branchiostoma floridae]
Length = 459
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 54/163 (33%), Gaps = 53/163 (32%)
Query: 3 GGLGLRNCNTGGLGLRNCNTG----GLGLRNCNTGGLG--------------LRNCNTGG 44
G + + N G + +CNTG G R C + G L N G
Sbjct: 132 GDVSYSSRNYGDVASYSCNTGYNLNGYSTRTCQSSGSWSQTAPACAAVQCPTLSNPTNGA 191
Query: 45 LGLRNCNTGGLGLRSCNTG----GLGLRNCNT---------------------------G 73
+ + N G + SCNTG G R C + G
Sbjct: 192 VSYSSRNYGDVASYSCNTGYNLNGYSTRTCQSSGSWSYSAPTCEGINTGQCPTLSNPTNG 251
Query: 74 GLGLRNCNTGGLGLRNCNTG----GLGLRNCNTRGLVAFTGPT 112
+ + N G + +CNTG G R C + G +++ PT
Sbjct: 252 AVSYSSRNYGDVAFYSCNTGYNLNGYSTRTCQSSGSWSYSAPT 294
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 51/151 (33%), Gaps = 50/151 (33%)
Query: 12 TGGLGLRNCNTG----GLGLRNCNTGGLG--------------LRNCNTGGLGLRNCNTG 53
TG + +CNTG G R C + G L N G + + N G
Sbjct: 83 TGDVASYSCNTGYNLAGSSTRTCQSSGYWSGYAPTCQAVQCPTLYNPTNGDVSYSSRNYG 142
Query: 54 GLGLRSCNTG----GLGLRNCNT------------------------GGLGLRNCNTGGL 85
+ SCNTG G R C + G + + N G +
Sbjct: 143 DVASYSCNTGYNLNGYSTRTCQSSGSWSQTAPACAAVQCPTLSNPTNGAVSYSSRNYGDV 202
Query: 86 GLRNCNTG----GLGLRNCNTRGLVAFTGPT 112
+CNTG G R C + G +++ PT
Sbjct: 203 ASYSCNTGYNLNGYSTRTCQSSGSWSYSAPT 233
>gi|428211486|ref|YP_007084630.1| putative low-complexity protein [Oscillatoria acuminata PCC 6304]
gi|427999867|gb|AFY80710.1| putative low-complexity protein [Oscillatoria acuminata PCC 6304]
Length = 404
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L CN GL L G+ LR + + L N G L + G L N
Sbjct: 247 AGAKLWGCNLQGLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDANL 306
Query: 63 GGLGLRNCNTG-----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G L C+ G L+N N LRN N L N G
Sbjct: 307 SGADLHRCSLALASLSGASLKNANLQEANLRNANLSDADLSGANLAG 353
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 35/102 (34%), Gaps = 5/102 (4%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
GL L G+ LR + + L N G L + G L + N G L C+
Sbjct: 258 GLDLSGAQLPGVKLRGADLSDIDLSEANLTGAKLAGADASGALLSDANLSGADLHRCSLA 317
Query: 64 -----GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
G L+N N LRN N L N G L
Sbjct: 318 LASLSGASLKNANLQEANLRNANLSDADLSGANLAGADLHQA 359
>gi|17230797|ref|NP_487345.1| hypothetical protein all3305 [Nostoc sp. PCC 7120]
gi|17132400|dbj|BAB75004.1| all3305 [Nostoc sp. PCC 7120]
Length = 496
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 38/100 (38%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
L LRN N + L N LR C+ G LR C+ G L G L N
Sbjct: 228 LDLRNINLRRVELLGANLQRADLRGCDFRGADLRGCDFSGANLEGAELAGSILFEANFLK 287
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L+ N G L GG LR+ N G LR N G
Sbjct: 288 ANLQGANIQGANLNRAELGGANLRSANLMGASLRAANLPG 327
>gi|339631806|ref|YP_004723448.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331162|emb|CCC26842.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 1255
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
>gi|427710065|ref|YP_007052442.1| pentapeptide repeat-containing protein [Nostoc sp. PCC 7107]
gi|427362570|gb|AFY45292.1| pentapeptide repeat protein [Nostoc sp. PCC 7107]
Length = 575
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 41/101 (40%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G L + N G+ N N G+ L + LRN N G+ L N + L N
Sbjct: 152 GANLTDANMRGVRFDNVNLQGVNLNGVDLSNADLRNFNFRGVSLNGVNLSRVNLNGYNLR 211
Query: 64 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
G+ L+N N L+N + L N + L N N +G
Sbjct: 212 GVELKNANLSYANLQNADLSNARLNNADLQNANLYNANLQG 252
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 40/108 (37%), Gaps = 5/108 (4%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC-- 60
G LRN N L N L + N L + N G LRN N L +
Sbjct: 86 SGANLRNINLSKAKLSRANAFRADLVSANLSDADLSSTNLSGADLRNANLTRADLTNADL 145
Query: 61 ---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
N G L + N G+ N N G+ L + LRN N RG+
Sbjct: 146 SGANLNGANLTDANMRGVRFDNVNLQGVNLNGVDLSNADLRNFNFRGV 193
>gi|289750499|ref|ZP_06509877.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289691086|gb|EFD58515.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 1660
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1062 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1121
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1122 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1170
>gi|220917215|ref|YP_002492519.1| hypothetical protein A2cp1_2113 [Anaeromyxobacter dehalogenans
2CP-1]
gi|219955069|gb|ACL65453.1| Repeat of unknown function XGLTT [Anaeromyxobacter dehalogenans
2CP-1]
Length = 462
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 94 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 153
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 154 INTNGIDTNGINTNGINTNGINTNGINTNGINTNGI 189
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 104 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGIDTNG 163
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 164 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 199
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 114 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGIDTNGINTNGINTNG 173
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 174 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 209
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 124 INTNGINTNGINTNGINTNGINTNGINTNGINTNGIDTNGINTNGINTNGINTNGINTNG 183
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 184 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 219
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 134 INTNGINTNGINTNGINTNGINTNGIDTNGINTNGINTNGINTNGINTNGINTNGINTNG 193
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 194 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 229
>gi|196039990|ref|ZP_03107293.1| acetyltransferase, GNAT family [Bacillus cereus NVH0597-99]
gi|196029249|gb|EDX67853.1| acetyltransferase, GNAT family [Bacillus cereus NVH0597-99]
Length = 308
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 9/105 (8%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
+ L+N + G +RN N + NCN RN N + N G GG
Sbjct: 190 VNLKNSSFVGSNIRNMN-----VSNCNVSQSKFRNINFRSSSYADLNLSGSKFSLVTLGG 244
Query: 65 LGLRNC----NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ ++ N + C+ G + N N + + NC+ G+
Sbjct: 245 VQFKDTSLGENKHPISFNRCDLEGSTISNSNLKNMEIENCDITGM 289
>gi|260791410|ref|XP_002590722.1| hypothetical protein BRAFLDRAFT_89528 [Branchiostoma floridae]
gi|229275918|gb|EEN46733.1| hypothetical protein BRAFLDRAFT_89528 [Branchiostoma floridae]
Length = 374
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 47/146 (32%), Gaps = 43/146 (29%)
Query: 4 GLGLRNCNTGGLGLRNCNTG---------------GLGLRNCNTGGLGLRNCNTG----- 43
G+G R N G+G R N G+G R N G+G R N
Sbjct: 106 GIGYRKLNRTGIGYRKLNRSSFIKLNRSPFINTRTGIGYRKLNRTGIGYRKLNRSPFIKL 165
Query: 44 ----------GLGLRNCNTG-------GLGLRSCNTGGLGLRNCNTGGL-----GLRNCN 81
G+G R N G+G R G+G R N N
Sbjct: 166 NRSSFINTRTGIGYRKLNRSPFINTRTGIGYRKLTRTGIGYRKLNRSSFIKLNHSFINTR 225
Query: 82 TGGLGLRNCNTGGLGLRNCNTRGLVA 107
T G+G R N G+G R N +
Sbjct: 226 T-GIGYRKLNRTGIGYRKLNRSPFIK 250
>gi|289574600|ref|ZP_06454827.1| PPE family protein [Mycobacterium tuberculosis K85]
gi|289539031|gb|EFD43609.1| PPE family protein [Mycobacterium tuberculosis K85]
Length = 1751
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1088 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1147
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1148 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1196
>gi|433634807|ref|YP_007268434.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070017]
gi|432166400|emb|CCK63895.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070017]
Length = 757
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNAGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG + NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGAFNTGSVNTGFLNAGNINTGVFNIGHMN 430
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNAGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG + NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGAFNTGSVNT 411
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGAFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
+ NTG L N NTG + + N G
Sbjct: 408 SVNTGFLNAGNINTGVFNIGHMNNG 432
>gi|309791671|ref|ZP_07686163.1| proprotein convertase P [Oscillochloris trichoides DG-6]
gi|308226293|gb|EFO80029.1| proprotein convertase P [Oscillochloris trichoides DG6]
Length = 1838
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%), Gaps = 12/66 (18%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G G+R+ TGG G+R +TGG G+R +TGG G+R +TGG G+R +TGG G+RS T
Sbjct: 1435 AGAGIRS--TGGAGIR--STGGAGIR--STGGAGIR--STGGAGIR--STGGAGIRS--T 1482
Query: 63 GGLGLR 68
GG +R
Sbjct: 1483 GGTFIR 1488
>gi|66362534|ref|XP_628233.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain
[Cryptosporidium parvum Iowa II]
gi|46229715|gb|EAK90533.1| protein with DEXDc plus ring plus HELICc; possible SNF2 domain
[Cryptosporidium parvum Iowa II]
Length = 2042
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 33/102 (32%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
++ G N NT N NT N NT N NT N NT +
Sbjct: 250 ITANFGTANSNTANFNTANSNTANFNTANSNTANFNTTNSNTANSNTANSNTANFNTANS 309
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NT N NT N NT N NT N NT
Sbjct: 310 NTANSNTANSNTSNSNTANSNTSNSNTANSNTANSNTSNSNT 351
>gi|433641890|ref|YP_007287649.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070008]
gi|432158438|emb|CCK55732.1| Conserved protein of unknown function, probable ancestor of PPE
family protein PPE24 (fragment) [Mycobacterium canettii
CIPT 140070008]
Length = 1258
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
Score = 34.7 bits (78), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
>gi|433631009|ref|YP_007264637.1| Conserved protein of unknown function, PPE family protein PPE24
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432162602|emb|CCK59982.1| Conserved protein of unknown function, PPE family protein PPE24
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 793
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 44/101 (43%), Gaps = 3/101 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
+GL N G +G N TG G+ N NTGG NTG + NTG + N
Sbjct: 345 IGLFNSGNGNIGFFNSGTGNFGIGNSGSYNTGGWNTGQANTGFFNAGSFNTGSFNVGDAN 404
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
TG + NTG + NTG + NTG + + NT
Sbjct: 405 TGMFNPGSYNTGDANPGSTNTGSFNTGDTNTGFVNSGDINT 445
>gi|340626761|ref|YP_004745213.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
gi|340004951|emb|CCC44099.1| ppe family protein [Mycobacterium canettii CIPT 140010059]
Length = 1308
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
>gi|306790595|ref|ZP_07428917.1| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu004]
gi|308332994|gb|EFP21845.1| putative PPE family protein [Mycobacterium tuberculosis SUMu004]
Length = 364
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 249 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 308
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 309 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 348
>gi|385991283|ref|YP_005909581.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
gi|339298476|gb|AEJ50586.1| PPE family protein [Mycobacterium tuberculosis CCDC5180]
Length = 1707
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1109 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1168
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1169 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1217
>gi|183982826|ref|YP_001851117.1| PPE family protein [Mycobacterium marinum M]
gi|183176152|gb|ACC41262.1| PPE family protein [Mycobacterium marinum M]
Length = 1021
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR---SC 60
G+GL N TG +GL N G +G N +G G+ N G G+ N G GL S
Sbjct: 298 GIGLLNSGTGNVGLFNSGDGNIGFFNSGSGNFGIGNTGNFGTGIFNSGNGSTGLFNAGSF 357
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + + NTG L + N GG + NTG + NT
Sbjct: 358 NTGVLNVGDGNTGILNTGSYNMGGFNPGSSNTGSFNIGGANT 399
>gi|289443397|ref|ZP_06433141.1| PPE family protein [Mycobacterium tuberculosis T46]
gi|289416316|gb|EFD13556.1| PPE family protein [Mycobacterium tuberculosis T46]
Length = 1810
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1051 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1110
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1111 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1159
>gi|289570001|ref|ZP_06450228.1| PPE family protein [Mycobacterium tuberculosis T17]
gi|289543755|gb|EFD47403.1| PPE family protein [Mycobacterium tuberculosis T17]
Length = 1833
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1028 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1087
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1088 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1136
>gi|308370232|ref|ZP_07420740.2| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308324932|gb|EFP13783.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 385
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 353
>gi|121637822|ref|YP_978045.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224990306|ref|YP_002644993.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|378771665|ref|YP_005171398.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
gi|121493469|emb|CAL71942.1| PPE family protein [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|224773419|dbj|BAH26225.1| PPE family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|341601849|emb|CCC64523.1| PPE family protein [Mycobacterium bovis BCG str. Moreau RDJ]
gi|356593986|gb|AET19215.1| PPE family protein [Mycobacterium bovis BCG str. Mexico]
Length = 1835
Score = 35.4 bits (80), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1172 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1231
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1232 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1280
>gi|156394479|ref|XP_001636853.1| predicted protein [Nematostella vectensis]
gi|156223960|gb|EDO44790.1| predicted protein [Nematostella vectensis]
Length = 117
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL + +T LGL +T LGL + +T LGL + T LGL + +T LGL S +T
Sbjct: 3 LGLCSYSTMTLGLCTYSTMTLGLCSYSTMTLGLCSYCTMTLGLCSYSTMTLGLCSYSTMT 62
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + +T LGL + LGL +T L
Sbjct: 63 LGLCSYSTMTLGLCSYSTMTLGLCTYSIMTLGLCTYSTMTL 103
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
LGL +T LGL + +T LGL + T LGL + +T LGL + +T LGL S +T
Sbjct: 13 LGLCTYSTMTLGLCSYSTMTLGLCSYCTMTLGLCSYSTMTLGLCSYSTMTLGLCSYSTMT 72
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
LGL + +T LGL + LGL +T LGL +T L
Sbjct: 73 LGLCSYSTMTLGLCTYSIMTLGLCTYSTMTLGLCTYSTMTL 113
>gi|433627012|ref|YP_007260641.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
gi|432154618|emb|CCK51856.1| Conserved protein of unknown function, PPE family protein
[Mycobacterium canettii CIPT 140060008]
Length = 1781
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 953 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1012
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1013 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1061
>gi|407464899|ref|YP_006775781.1| pentapeptide repeat-containing protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048087|gb|AFS82839.1| pentapeptide repeat-containing protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 165
Score = 35.4 bits (80), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 33/89 (37%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L + G L N G +R N L + G LRN N G L +
Sbjct: 51 DLSESDLSGAILFNVKLRGADMRGVNLSNAKLWDAELYGADLRNANISGADLFYADLRNA 110
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGG 94
L N N G+ LR+ N G L + N G
Sbjct: 111 DLNNANMQGVNLRHANFTGTILTSVNFAG 139
>gi|218247487|ref|YP_002372858.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8801]
gi|257061177|ref|YP_003139065.1| pentapeptide repeat-containing protein [Cyanothece sp. PCC 8802]
gi|218167965|gb|ACK66702.1| pentapeptide repeat protein [Cyanothece sp. PCC 8801]
gi|256591343|gb|ACV02230.1| pentapeptide repeat protein [Cyanothece sp. PCC 8802]
Length = 401
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 35/99 (35%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L N N G+ L N L+N N L+N N L++ L G+
Sbjct: 40 DLENANLKGMNLEGANLEKANLKNANLERANLKNANLKQAILQDAKLTEAQLEGVMLDGV 99
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
N G+ L N G+ N G+ L N N G
Sbjct: 100 NFINAKLKGVNLSGVNLKGVNFVNAEMDGIILTNANLEG 138
>gi|339631970|ref|YP_004723612.1| PPE family protein [Mycobacterium africanum GM041182]
gi|339331326|emb|CCC27010.1| PPE family protein [Mycobacterium africanum GM041182]
Length = 1838
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1198 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1257
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1258 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1306
>gi|306786226|ref|ZP_07424548.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
gi|308329162|gb|EFP18013.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 575
Score = 35.0 bits (79), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC--- 60
G G N +G +GL N TG +G N TG G+ N + G+ N GL +
Sbjct: 27 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 86
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG + + NTG NTGG + NTG L + NT
Sbjct: 87 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINT 128
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 52/134 (38%), Gaps = 25/134 (18%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC-----------------------NTGGLGLR 38
SG +GL N TG +G N TG G+ N NTG +
Sbjct: 35 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 94
Query: 39 NCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 98
+ NTG NTGG S NTG L + NTG + NTG N + G
Sbjct: 95 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFISGNYSNG--AFW 152
Query: 99 NCNTRGLVAFTGPT 112
+ +GL+ F+ P
Sbjct: 153 TGDYQGLLDFSFPV 166
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 17 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 76
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 77 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 118
>gi|389608533|dbj|BAM17876.1| similar to CG3800 [Papilio xuthus]
Length = 144
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 42/119 (35%), Gaps = 20/119 (16%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRN------------CNTGGLGLRNCNTGGLGLR 48
MS + + CN G R C GG+ R+ CN G R+C
Sbjct: 1 MSSSVCYK-CNRTGHFARECTQGGVASRDTGFNRQREKCFKCNRTGHFARDCKEEADRCY 59
Query: 49 NCNTGGLGLRSC--NTGGLGLRNCNTGGLGLRNC-----NTGGLGLRNCNTGGLGLRNC 100
CN G R C + NCN G RNC ++ G CN G RNC
Sbjct: 60 RCNGTGHIARECAQSPDEPSCYNCNKTGHIARNCPEGGRDSSGQTCYTCNKAGHISRNC 118
>gi|294464869|gb|ADE77940.1| unknown [Picea sitchensis]
Length = 253
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
R+ G N N LR C G LR G L++ N L SC+
Sbjct: 126 FRDSEADGSNFHNAN-----LRECEFVGASLRGALLAGANLQSANLQDASLDSCSFCEAD 180
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
LR+ + G L + N G L N G+ L+ N
Sbjct: 181 LRSAHLQGADLTDANLSGANLEGANLKGVKLKGAN 215
>gi|306792899|ref|ZP_07431201.1| hypothetical protein TMEG_04054, partial [Mycobacterium
tuberculosis SUMu005]
gi|308338662|gb|EFP27513.1| hypothetical protein TMEG_04054 [Mycobacterium tuberculosis
SUMu005]
Length = 380
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 19 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 78
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 79 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 131
>gi|298526823|ref|ZP_07014232.1| PPE Family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298496617|gb|EFI31911.1| PPE Family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 374
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 234 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 293
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 294 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 333
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 267 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 326
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLV 106
GL N NTG + + NTG NTGG C GLV
Sbjct: 327 STGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGQCQ-HGLV 371
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 285 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 344
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTG 83
S NTG NTGG C G
Sbjct: 345 SYNTGSFNAGEANTGGFNPGQCQHG 369
>gi|289752049|ref|ZP_06511427.1| PPE family protein [Mycobacterium tuberculosis T92]
gi|289692636|gb|EFD60065.1| PPE family protein [Mycobacterium tuberculosis T92]
Length = 577
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 45/105 (42%), Gaps = 17/105 (16%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR--------------- 48
G+G N G +GL N TG +GL N TG GL N+GG
Sbjct: 8 GIGGLNSGAGNIGLFNSGTGNVGLFNSGTGNFGL--FNSGGYNTGIGNGGTGSTGLFNAG 65
Query: 49 NCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG S NTG + + NTGG + NTG N NTG
Sbjct: 66 NFNTGVANPGSYNTGSFNVGDTNTGGFNPGSINTGWFNTGNANTG 110
>gi|109119808|ref|XP_001115964.1| PREDICTED: hypothetical protein LOC720483 [Macaca mulatta]
Length = 117
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 50/104 (48%)
Query: 1 MSGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
++G L L TG L L TG L L TGGL L TGGL L TGGL L
Sbjct: 13 LTGELSLCVTLTGELILCVTLTGELSLCVTLTGGLSLCVTLTGGLSLCVTLTGGLSLCVT 72
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
TGGL L TGGL L TGGL L TGGL L TR
Sbjct: 73 LTGGLSLCVTLTGGLSLCVTLTGGLILCVTLTGGLSLCVTLTRS 116
>gi|320161171|ref|YP_004174395.1| hypothetical protein ANT_17690 [Anaerolinea thermophila UNI-1]
gi|319995024|dbj|BAJ63795.1| hypothetical protein ANT_17690 [Anaerolinea thermophila UNI-1]
Length = 159
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L N + G + + N GG LRN G LR + G LR G LR N
Sbjct: 46 LSNVDLRGAVMVDANLGGANLRNAVLIGADLRRAHLRGADLR-----GADLREANLAEAD 100
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCN 91
L N G L + N G + L N N
Sbjct: 101 LSEANLTGANLIDANLGAVDLTNAN 125
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 17 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLG 76
L N + G + + N GG LRN G LR + G LR G LR N
Sbjct: 46 LSNVDLRGAVMVDANLGGANLRNAVLIGADLRRAHLRGADLR-----GADLREANLAEAD 100
Query: 77 LRNCNTGGLGLRNCNTGGLGLRNCN 101
L N G L + N G + L N N
Sbjct: 101 LSEANLTGANLIDANLGAVDLTNAN 125
>gi|433628488|ref|YP_007262117.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140060008]
gi|432156094|emb|CCK53347.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140060008]
Length = 364
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNIGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 81 NTGGLGLRNCNTGGLGLRNCNTR 103
TG +G N TG G+ N +
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSY 336
>gi|308377310|ref|ZP_07441826.2| putative PPE family protein, partial [Mycobacterium tuberculosis
SUMu008]
gi|308348293|gb|EFP37144.1| putative PPE family protein [Mycobacterium tuberculosis SUMu008]
Length = 817
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 297 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 356
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 357 NTGVVNAGSYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
>gi|31793109|ref|NP_855602.1| PPE family protein [Mycobacterium bovis AF2122/97]
gi|31618700|emb|CAD94653.1| PPE FAMILY PROTEIN [Mycobacterium bovis AF2122/97]
Length = 1910
Score = 35.0 bits (79), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1247 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1306
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1307 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1355
>gi|298525411|ref|ZP_07012820.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298495205|gb|EFI30499.1| PPE family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 1884
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 1125 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 1184
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 1185 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 1233
>gi|306968023|ref|ZP_07480684.1| hypothetical protein TMIG_04078, partial [Mycobacterium
tuberculosis SUMu009]
gi|308354353|gb|EFP43204.1| hypothetical protein TMIG_04078 [Mycobacterium tuberculosis
SUMu009]
Length = 392
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 21 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 80
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 81 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 133
>gi|306790594|ref|ZP_07428916.1| hypothetical protein TMDG_04045, partial [Mycobacterium
tuberculosis SUMu004]
gi|308332995|gb|EFP21846.1| hypothetical protein TMDG_04045 [Mycobacterium tuberculosis
SUMu004]
Length = 542
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 51/117 (43%), Gaps = 13/117 (11%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG-------GLGLRNC--- 50
G G N +G +GL N TG +G N TG G+ N NTG GL N
Sbjct: 12 GFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGF 71
Query: 51 NTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
NTG + S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 72 NTGVVNAGSYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 128
>gi|433632450|ref|YP_007266078.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
gi|432164043|emb|CCK61476.1| Conserved protein of unknown function, PPE family protein, PPE54
(fragment) [Mycobacterium canettii CIPT 140070010]
Length = 390
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + +GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNVGLANMGVGNIGFANTGSGNIGIGLSGDNLTGFGGFNTGSGNVGLFNS 313
Query: 81 NTGGLGLRNCNTGGLGLRNCNTRGLV 106
TG +G N TG G C+ RG++
Sbjct: 314 GTGNVGFFNSGTGNWG---CSIRGVI 336
>gi|306802486|ref|ZP_07439154.1| hypothetical protein TMHG_04066, partial [Mycobacterium
tuberculosis SUMu008]
gi|308350777|gb|EFP39628.1| hypothetical protein TMHG_04066 [Mycobacterium tuberculosis
SUMu008]
Length = 410
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 21 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 80
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 81 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 133
>gi|167537358|ref|XP_001750348.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771176|gb|EDQ84847.1| predicted protein [Monosiga brevicollis MX1]
Length = 1036
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
L C+ G R C+ + N +R + G LRNCN LRSCN G
Sbjct: 937 LPRCSFEGASCRGCD-----FEDSNFEDANMRVASFKGASLRNCN-----LRSCNLAGSD 986
Query: 67 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L C+ G CN G LR NT +T
Sbjct: 987 LSECDLSG-----CNLQGTNLRGTNTQRAKFHKIST 1017
>gi|306784667|ref|ZP_07422989.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu003]
gi|308330608|gb|EFP19459.1| PPE family protein [Mycobacterium tuberculosis SUMu003]
Length = 401
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 21 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 80
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 81 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 133
>gi|306779454|ref|ZP_07417791.1| PPE family protein, partial [Mycobacterium tuberculosis SUMu002]
gi|308327594|gb|EFP16445.1| PPE family protein [Mycobacterium tuberculosis SUMu002]
Length = 414
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 18 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 77
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 78 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 130
>gi|354569116|ref|ZP_08988274.1| pentapeptide repeat protein [Fischerella sp. JSC-11]
gi|353538991|gb|EHC08491.1| pentapeptide repeat protein [Fischerella sp. JSC-11]
Length = 477
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 41/102 (40%), Gaps = 10/102 (9%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGL---RNCNT--GGLGLRS 59
L LRN + + L N N L LR N L+ N L + C+T L+S
Sbjct: 198 LDLRNTDIRQVDLSNANLQRLDLRGANLTKANLQKANLFAANLEGAKLCSTTLYEANLQS 257
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
CN L+ N G L N G LR+ N G LR N
Sbjct: 258 CN-----LQEANLHGANLNRANLSGANLRSANLSGASLRAAN 294
>gi|156065797|ref|XP_001598820.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980]
gi|154691768|gb|EDN91506.1| hypothetical protein SS1G_00909 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 502
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 19 NCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGL 75
NC+ G +R+C RNC G ++C G RS G+ + CN G
Sbjct: 319 NCSEIGHRVRDCPIPREDKFACRNCKKSGHSSKDC----TGPRSAE--GVECKKCNEIGH 372
Query: 76 GLRNCNTGGLGL----RNCNTGGLGLRNC-NTRGLV 106
R+C TGG G RNCN G + C N R ++
Sbjct: 373 FSRDCPTGGGGDGGVCRNCNQPGHHSKECTNERVII 408
>gi|197122449|ref|YP_002134400.1| XGLTT repeat-containing protein [Anaeromyxobacter sp. K]
gi|196172298|gb|ACG73271.1| XGLTT repeat protein [Anaeromyxobacter sp. K]
Length = 437
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 79 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 138
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 139 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 174
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 84 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 143
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 144 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 179
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 89 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 148
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 149 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 184
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 94 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 153
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 154 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 189
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 99 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 158
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 159 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 194
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 104 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 163
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 164 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 199
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 40/96 (41%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 109 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 168
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G+
Sbjct: 169 INTNGINTNGINTNGINTNGINTNGINTNGINTNGI 204
Score = 34.3 bits (77), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 39/96 (40%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
NT G+ NT G+ NT G+ NT G+ NT G+ NT G+
Sbjct: 114 INTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNGINTNG 173
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
NT G+ NT G+ NT G+ NT G
Sbjct: 174 INTNGINTNGINTNGINTNGINTNGINTNGINTNGF 209
>gi|37520242|ref|NP_923619.1| hypothetical protein glr0673 [Gloeobacter violaceus PCC 7421]
gi|35211235|dbj|BAC88614.1| glr0673 [Gloeobacter violaceus PCC 7421]
Length = 181
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
+CN G L N + G+ L + + LR + G L + G + N G+G
Sbjct: 54 SCNLAGANLSNMDLSGVDLSFASLRAVNLRGSDLTGALLNGADLRGAKIEGANLTGVGCF 113
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
NC GG LR G+ L N + G L N +
Sbjct: 114 NCQLGGASLRGATMAGMTLSNADLTGADLSNTD 146
>gi|306797745|ref|ZP_07436047.1| hypothetical protein TMFG_04055, partial [Mycobacterium
tuberculosis SUMu006]
gi|308341933|gb|EFP30784.1| hypothetical protein TMFG_04055 [Mycobacterium tuberculosis
SUMu006]
Length = 411
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 46/113 (40%), Gaps = 14/113 (12%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRN-------------- 49
G GL N G G N TG +GL N TG +G+ N TG G+ N
Sbjct: 22 GFGLTGDNQQGFGGWNSGTGNIGLFNSGTGNIGIGNTGTGNFGIGNSGTSYNTGIGNTGQ 81
Query: 50 CNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG NTG N NTG L + NTG + NTG N NT
Sbjct: 82 ANTGFFNAGIANTGIGNTGNYNTGSFNLGSFNTGDFNTGSSNTGFFNPGNLNT 134
>gi|154301789|ref|XP_001551306.1| hypothetical protein BC1G_10046 [Botryotinia fuckeliana B05.10]
Length = 533
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 19/116 (16%)
Query: 10 CNTGGLGLRNCNTGGL-GLR------NCNTGGLGLRNCN---TGGLGLRNCNTGGLGLRS 59
CN G +++C + G R NC G +R+C RNC G +
Sbjct: 252 CNELGHTVKHCTEERVDGERVQVQCFNCGEIGHRVRDCPIPREDKFACRNCKKSGHSSKE 311
Query: 60 C----NTGGLGLRNCNTGGLGLRNCNTGGLGL----RNCNTGGLGLRNC-NTRGLV 106
C + G+ +NCN G R+C TGG G RNCN G ++C N R ++
Sbjct: 312 CPEPRSAEGVECKNCNEIGHFSRDCPTGGGGDGGLCRNCNQPGHRAKDCTNERVMI 367
>gi|306973799|ref|ZP_07486460.1| hypothetical protein TMJG_04098, partial [Mycobacterium
tuberculosis SUMu010]
gi|308356852|gb|EFP45703.1| hypothetical protein TMJG_04098 [Mycobacterium tuberculosis
SUMu010]
Length = 277
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 5/86 (5%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 188 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 247
Query: 81 NTGGLGLRNCNTGGLGLRNCNTRGLV 106
TG +G N TG G C+ RG++
Sbjct: 248 GTGNVGFFNSGTGNWG---CSIRGVI 270
>gi|428313938|ref|YP_007124915.1| low-complexity protein [Microcoleus sp. PCC 7113]
gi|428255550|gb|AFZ21509.1| putative low-complexity protein [Microcoleus sp. PCC 7113]
Length = 343
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G L N N G L N N G L N N G N G LR N G L S N
Sbjct: 180 GADLINANLSGADLINANLSGTDLINANLSG-----ANLSGANLRYANLSGANLSSANLS 234
Query: 64 GLGLRNCNTGGLGLRNCN-TGGLGLRNCNTGGLGLRNCNTRGL 105
G L+ N G L NC L N N G L N+R +
Sbjct: 235 GANLKYANLSGADL-NCTLLSDANLSNANLSGALLFFVNSREV 276
>gi|433629998|ref|YP_007263626.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070010]
gi|432161591|emb|CCK58936.1| Conserved protein of unknown function, PPE family (fragment)
[Mycobacterium canettii CIPT 140070010]
Length = 1545
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG----G 54
SG LG N +G +G N G LG N G G N G GL N NTG G
Sbjct: 241 SGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGLNNVGFGNTGTNNVG 300
Query: 55 LGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL G G N + +GL N TG +G+ N TG G+ N
Sbjct: 301 IGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGVGNS 346
Score = 34.7 bits (78), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTG----G 54
SG LG N +G +G N G LG N G G N G GL N NTG G
Sbjct: 1182 SGNLGDFNLGSGNVGGYNVGPGNLGSYNIGFGNAGDYNLGLGNTGLNNVGFGNTGTNNVG 1241
Query: 55 LGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
+GL G G N + +GL N TG +G+ N TG G+ N
Sbjct: 1242 IGLSGIGQVGFGAWNSGSANVGLFNSGTGNVGVFNSGTGNWGVGNS 1287
>gi|385994897|ref|YP_005913195.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
gi|339294851|gb|AEJ46962.1| PPE family protein [Mycobacterium tuberculosis CCDC5079]
Length = 1248
Score = 34.7 bits (78), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 52/109 (47%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G +G N G +G+ N NTG + N NTG N NTG
Sbjct: 627 SGNIGFFNSGNGNIGFFNSGNGNVGIGNSGNYNTGLGNVGNANTGLFNTGNVNTGIGNAG 686
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG + NTG L N NTG L L + NTG + + NT L++
Sbjct: 687 SYNTGSYNAGDTNTGDLNPGNANTGYLNLGDLNTGWGNIGDLNTGALIS 735
>gi|241164842|ref|XP_002409557.1| hypothetical protein IscW_ISCW002486 [Ixodes scapularis]
gi|215494588|gb|EEC04229.1| hypothetical protein IscW_ISCW002486 [Ixodes scapularis]
Length = 105
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 33/92 (35%), Gaps = 6/92 (6%)
Query: 12 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG---LR 68
G +R C G +R G +R C G R C G +R C G LR
Sbjct: 14 VAGCCVRGCCVAGRWVR---VAGCWVRGCCITGCWRRGCCASGSCVRGCCVAGFASCWLR 70
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
C G +R C R C+ G +R C
Sbjct: 71 GCCVLGCWIRGCRISDCWARGCSVAGWWMRGC 102
>gi|417860811|ref|ZP_12505866.1| hypothetical protein Agau_L100210 [Agrobacterium tumefaciens F2]
gi|338821215|gb|EGP55184.1| hypothetical protein Agau_L100210 [Agrobacterium tumefaciens F2]
Length = 112
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 28/80 (35%)
Query: 27 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLG 86
+ N G N N G N N G N G + + N GL L N N G
Sbjct: 22 FNDVNLSGTVFDNVNLSGASFNNINLSGASFTDNNMSGWSIDDVNFSGLKLSNSNLSGAQ 81
Query: 87 LRNCNTGGLGLRNCNTRGLV 106
+ +C G+ + L+
Sbjct: 82 ITSCRMTGMKIDGIAVEDLM 101
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 24/62 (38%)
Query: 7 LRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLG 66
N N G N N G + N G + + N GL L N N G + SC G+
Sbjct: 32 FDNVNLSGASFNNINLSGASFTDNNMSGWSIDDVNFSGLKLSNSNLSGAQITSCRMTGMK 91
Query: 67 LR 68
+
Sbjct: 92 ID 93
>gi|378582929|ref|ZP_09831540.1| hypothetical protein CKS_5479 [Pantoea stewartii subsp. stewartii
DC283]
gi|377814439|gb|EHT97579.1| hypothetical protein CKS_5479 [Pantoea stewartii subsp. stewartii
DC283]
Length = 375
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 33/96 (34%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L N N G L N N L N N G L + N L + L + +
Sbjct: 203 DLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRA 262
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L N N G L N N L N N G L + N
Sbjct: 263 DLSNANLSGADLTNANLNQTDLPNVNLSGANLAHAN 298
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.145 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,360,277,419
Number of Sequences: 23463169
Number of extensions: 121549303
Number of successful extensions: 338796
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1581
Number of HSP's successfully gapped in prelim test: 1695
Number of HSP's that attempted gapping in prelim test: 216231
Number of HSP's gapped (non-prelim): 46358
length of query: 115
length of database: 8,064,228,071
effective HSP length: 82
effective length of query: 33
effective length of database: 6,140,248,213
effective search space: 202628191029
effective search space used: 202628191029
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)