BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5556
(115 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6C908|PAN1_YARLI Actin cytoskeleton-regulatory complex protein PAN1 OS=Yarrowia
lipolytica (strain CLIB 122 / E 150) GN=PAN1 PE=3 SV=1
Length = 1634
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
Query: 1 MSGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRS 59
++GG+ L+ TG + L+ +TG L++ TGG L++ TGG L++ TGG L+S
Sbjct: 399 ITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTGGAPLQS 458
Query: 60 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TGG L+ +TG L+ +TG L+ +TG + +
Sbjct: 459 QLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQSTGYMPQQQT 499
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 6 GLRNCNTGGLGLRNCNTGGL-GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
++ TGG+ L+ TG + L+ +TG L++ TGG L++ TGG L+S TGG
Sbjct: 394 AMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQSQLTGGAPLQSQLTGG 453
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
L++ TGG L+ +TG L+ +TG L+ +T
Sbjct: 454 APLQSQLTGGAPLQQQSTGYAPLQQQSTGYAPLQQQST 491
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 22 TGGLGLRNCNTGGL--GLRNCNTGGLGLRNCNTGGL-GLRSCNTGGLGLRNCNTGGLGLR 78
TG ++ +TG ++ TGG+ L+ TG + L+ +TG L++ TGG L+
Sbjct: 378 TGYQPMQQQSTGYPMQAMQPQITGGMPLQQQRTGPMQPLQQQSTGYAPLQSQLTGGAPLQ 437
Query: 79 NCNTGGLGLRNCNTGGLGLRN 99
+ TGG L++ TGG L++
Sbjct: 438 SQLTGGAPLQSQLTGGAPLQS 458
>sp|Q6MWY2|PPE54_MYCTU Uncharacterized PPE family protein PPE54 OS=Mycobacterium
tuberculosis GN=ppe54 PE=3 SV=1
Length = 2523
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 305 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 364
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 365 SYNTGSFNAGEANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 413
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 1490 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 1549
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 1550 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 1598
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 49/109 (44%), Gaps = 3/109 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLR 58
SG +GL N TG +G N TG G+ N + G+ N GL N NTG +
Sbjct: 2066 SGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNAGGFNTGVVNAG 2125
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGLVA 107
S NTG NTGG + NTG L + NTG + NT ++
Sbjct: 2126 SYNTGSFNAGQANTGGFNPGSVNTGWLNTGDINTGVANSGDVNTGAFIS 2174
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
Query: 15 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNT 72
GL N +G N + GL N G +GL N G G+GL N G G N +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 73 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTR 103
+GL N TG +G N TG LG+ N +
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNSGSH 831
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 287 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 346
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 347 STGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGFNPGSVNT 388
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 1472 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 1531
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 1532 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 1573
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTG 63
G+GL N G G N +G +GL N TG +G N TG G+ N + G+ +
Sbjct: 2048 GIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIA 2107
Query: 64 GLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
GL N NTG + + NTG NTGG + NT
Sbjct: 2108 STGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGFNPGSVNT 2149
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 81 NTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N
Sbjct: 314 GTGNVGFFNSGTGNWGVFNS 333
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 81 NTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNS 1518
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 23 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRSCNTGGLGLRNCNTGGLGLRNC 80
G +G N + GL N G +G N +G G+GL N G G N +G +GL N
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 81 NTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNS 2094
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 254 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 313
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 314 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 353
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 1439 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 1498
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 1499 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 1538
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N + GL N G +G N +G G+GL N G G N +G +GL +
Sbjct: 2015 GNIGFGNAGSYNFGLANMGVGNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNS 2074
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC 100
TG +G N TG G+ N + G+ N GL N
Sbjct: 2075 GTGNVGFFNSGTGNWGVFNSGSYNTGIGNSGIASTGLFNA 2114
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 5 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTG--GLGLRNCNTGGLGLRSCNT 62
GL N +G N + GL N G +GL N G G+GL N G G + +
Sbjct: 741 FGLGNIGFDNVGFGNAGSSNFGLANMGIGNIGLANTGNGNIGIGLSGDNLTGFGGFNSGS 800
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNC 90
+GL N TG +G N TG LG+ N
Sbjct: 801 ENVGLFNSGTGNVGFFNSGTGNLGVFNS 828
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ +
Sbjct: 274 GNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNS 333
Query: 61 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGL 105
+ G+ N GL N NTG + + NTG NT G
Sbjct: 334 GSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGEANTGGF 381
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ +
Sbjct: 1459 GNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNS 1518
Query: 61 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGL 105
+ G+ N GL N NTG + + NTG NT G
Sbjct: 1519 GSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGF 1566
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 3 GGLGLRNCNTG--GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC 60
G +G N +G G+GL N G G N +G +GL N TG +G N TG G+ +
Sbjct: 2035 GNIGFANTGSGNFGIGLTGDNLTGFGGFNTGSGNVGLFNSGTGNVGFFNSGTGNWGVFNS 2094
Query: 61 NTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTRGL 105
+ G+ N GL N NTG + + NTG NT G
Sbjct: 2095 GSYNTGIGNSGIASTGLFNAGGFNTGVVNAGSYNTGSFNAGQANTGGF 2142
>sp|Q79FL2|PPE24_MYCTU Uncharacterized PPE family protein PPE24 OS=Mycobacterium
tuberculosis GN=ppe24 PE=3 SV=1
Length = 1053
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 3/103 (2%)
Query: 2 SGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLR 58
SG +G N G G+ N NTGG + NTG + NTG L + N NTG L
Sbjct: 328 SGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTG 387
Query: 59 SCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
S N G + NTG N NTG L N NTG + + N
Sbjct: 388 SYNMGDFNPGSSNTGTFNTGNANTGFLNAGNINTGVFNIGHMN 430
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 4 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNC---NTGGLGLRNCNTGGLGLRSC 60
G+G N TG GL N +G +G N G G+ N NTGG + NTG S
Sbjct: 310 GIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHGNTGFFNAGSF 369
Query: 61 NTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNT 102
NTG L + N NTG L + N G + NTG N NT
Sbjct: 370 NTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTGNANT 411
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 40/85 (47%)
Query: 9 NCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLR 68
N NTGG + NTG + NTG L + N NTG L + N G S NTG
Sbjct: 348 NFNTGGWNSGHGNTGFFNAGSFNTGMLDVGNANTGSLNTGSYNMGDFNPGSSNTGTFNTG 407
Query: 69 NCNTGGLGLRNCNTGGLGLRNCNTG 93
N NTG L N NTG + + N G
Sbjct: 408 NANTGFLNAGNINTGVFNIGHMNNG 432
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 14 GLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSC---NTGGLGLRNC 70
G+GL N G+G N TG GL N +G +G N G G+ + NTGG +
Sbjct: 300 GIGLTGNNQIGIGGLNSGTGNFGLFNSGSGNVGFFNSGNGNFGIGNSGNFNTGGWNSGHG 359
Query: 71 NTGGLGLRNCNTGGLGLRNCNTGGL 95
NTG + NTG L + N NTG L
Sbjct: 360 NTGFFNAGSFNTGMLDVGNANTGSL 384
>sp|Q52118|YMO3_ERWST Uncharacterized protein in mobD 3'region OS=Erwinia stewartii PE=4
SV=1
Length = 295
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 33/96 (34%)
Query: 6 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGL 65
L N N G L N N L N N G L + N L + L + +
Sbjct: 123 DLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRA 182
Query: 66 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
L N N G L N N L N N G L + N
Sbjct: 183 DLSNANLSGADLTNANLNQTDLPNVNLSGANLAHAN 218
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 30/89 (33%)
Query: 16 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGL 75
L N N G L N N L N N G L + N L + L N +
Sbjct: 123 DLSNANLSGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRA 182
Query: 76 GLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L N N G L N N L N N G
Sbjct: 183 DLSNANLSGADLTNANLNQTDLPNVNLSG 211
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 30/92 (32%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRN 69
N G+ L + + G L + N L + N L N L L N
Sbjct: 67 INLKGVNLSDTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSN 126
Query: 70 CNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCN 101
N G L N N L N N G L + N
Sbjct: 127 ANLSGADLTNANLNQTDLPNVNLSGANLAHAN 158
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 30/89 (33%)
Query: 3 GGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNT 62
G L N N L N N G L + N L + L N + L + N
Sbjct: 130 SGADLTNANLNQTDLPNVNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLSNANL 189
Query: 63 GGLGLRNCNTGGLGLRNCNTGGLGLRNCN 91
G L N N L N N G L + N
Sbjct: 190 SGADLTNANLNQTDLPNVNLSGANLAHAN 218
>sp|Q80UN1|KCTD9_MOUSE BTB/POZ domain-containing protein KCTD9 OS=Mus musculus GN=Kctd9
PE=2 SV=1
Length = 339
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCN---TGGLG--LRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
N G+ + N G LR CN GL L N G+ + G+ LR
Sbjct: 223 ANLQGVKMLCSNAEGASLRLCNFEDPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKN 282
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L+NCN LR G L NC+ G L+ N RG
Sbjct: 283 AKLKNCN-----LRGATLAGTDLENCDLSGCDLQEANLRG 317
>sp|Q4N8L0|DRE2_THEPA Anamorsin homolog OS=Theileria parva GN=TP01_0461 PE=3 SV=1
Length = 317
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 26 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGL 85
G ++ NT GL+ L L++ NT GL+S NT GL+ LGL+N L
Sbjct: 48 GTKSLNTKSFGLK-----SLSLKSLNTKSSGLKSLNTKSSGLK-----SLGLKN-EFDYL 96
Query: 86 GLRNCNTGGL 95
+ GL
Sbjct: 97 TFEQVKSSGL 106
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 11/70 (15%)
Query: 16 GLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGL 75
G ++ NT GL+ L L++ NT GL++ NT GL+S LGL+N L
Sbjct: 48 GTKSLNTKSFGLK-----SLSLKSLNTKSSGLKSLNTKSSGLKS-----LGLKN-EFDYL 96
Query: 76 GLRNCNTGGL 85
+ GL
Sbjct: 97 TFEQVKSSGL 106
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 11/70 (15%)
Query: 36 GLRNCNTGGLGLRNCNTGGLGLRSCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGL 95
G ++ NT GL+ L L+S NT GL++ NT GL+ LGL+N L
Sbjct: 48 GTKSLNTKSFGLK-----SLSLKSLNTKSSGLKSLNTKSSGLK-----SLGLKN-EFDYL 96
Query: 96 GLRNCNTRGL 105
+ GL
Sbjct: 97 TFEQVKSSGL 106
>sp|Q7L273|KCTD9_HUMAN BTB/POZ domain-containing protein KCTD9 OS=Homo sapiens GN=KCTD9
PE=2 SV=1
Length = 389
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 10/100 (10%)
Query: 10 CNTGGLGLRNCNTGGLGLRNCN---TGGLG--LRNCNTGGLGLRNCNTGGLGLRSCNTGG 64
N G+ + N G L+ CN GL L N G+ + G+ LR
Sbjct: 273 ANLQGVKMLCSNAEGASLKLCNFEDPSGLKANLEGANLKGVDMEGSQMTGINLRVATLKN 332
Query: 65 LGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRG 104
L+NCN LR G L NC+ G L+ N RG
Sbjct: 333 AKLKNCN-----LRGATLAGTDLENCDLSGCDLQEANLRG 367
>sp|Q8ILR9|YPF17_PLAF7 Protein PF14_0175 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0175
PE=4 SV=1
Length = 4662
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/104 (21%), Positives = 35/104 (33%), Gaps = 2/104 (1%)
Query: 2 SGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRSCN 61
S L N N G+ N N G+ N N G+ N N G+ N N + + N
Sbjct: 3930 STSLNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNINNVGMNQPNIN--NVSMNQPN 3987
Query: 62 TGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTGGLGLRNCNTRGL 105
+ + N + + N + NT + +T
Sbjct: 3988 INNVNMNQPNINNVSMNQPNINNFSMNQSNTNNFNMNKPSTSSF 4031
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.145 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,325,683
Number of Sequences: 539616
Number of extensions: 2799008
Number of successful extensions: 5856
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 3761
Number of HSP's gapped (non-prelim): 907
length of query: 115
length of database: 191,569,459
effective HSP length: 83
effective length of query: 32
effective length of database: 146,781,331
effective search space: 4697002592
effective search space used: 4697002592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)