BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5557
(213 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|125811580|ref|XP_001361929.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|195170162|ref|XP_002025882.1| GL10169 [Drosophila persimilis]
gi|54637105|gb|EAL26508.1| GA18077 [Drosophila pseudoobscura pseudoobscura]
gi|194110746|gb|EDW32789.1| GL10169 [Drosophila persimilis]
Length = 137
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGNQYGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGENVVLLGEI 80
>gi|195382173|ref|XP_002049805.1| GJ21790 [Drosophila virilis]
gi|194144602|gb|EDW60998.1| GJ21790 [Drosophila virilis]
Length = 137
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/52 (90%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGNQYGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNQYGDIPRGVFIIRGENVVLLGEI 80
>gi|198437342|ref|XP_002124367.1| PREDICTED: similar to U6 snRNA-associated Sm-like protein LSm1
(Cancer-associated Sm-like) (Small nuclear ribonuclear
CaSm) [Ciona intestinalis]
Length = 133
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/66 (72%), Positives = 57/66 (86%)
Query: 113 EEQNRQQGLYPNQKRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENV 172
EE +++Q + R LIGYLRSVDQFANLVLHKT+ER+HVG+ YGDIPRGIF+IRGENV
Sbjct: 12 EEIDKKQLVMLRDGRILIGYLRSVDQFANLVLHKTVERVHVGSMYGDIPRGIFVIRGENV 71
Query: 173 VLMGEV 178
VL+GEV
Sbjct: 72 VLLGEV 77
>gi|427786347|gb|JAA58625.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 135
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 121 LYPNQKRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
++ RTLIGYLRS+DQFANLVLH+TIERIHVG QYGDIPRGIF+IRG+NVVL+GE+
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEI 79
>gi|148298867|ref|NP_001091827.1| LSM1-like protein [Bombyx mori]
gi|95102704|gb|ABF51290.1| LSM1-like protein [Bombyx mori]
Length = 138
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLR VDQFANLVLHKTIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 30 RTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVLLGEI 81
>gi|357609556|gb|EHJ66513.1| LSM1-like protein [Danaus plexippus]
Length = 138
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLR VDQFANLVLHKTIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 30 RTLIGYLRCVDQFANLVLHKTIERIHVGREYGDIPRGIFIVRGENVVLLGEI 81
>gi|346471247|gb|AEO35468.1| hypothetical protein [Amblyomma maculatum]
Length = 135
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/58 (77%), Positives = 53/58 (91%)
Query: 121 LYPNQKRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
++ RTLIGYLRS+DQFANLVLH+TIERIHVG QYGDIPRGIF+IRG+NVVL+GE+
Sbjct: 22 VFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGKQYGDIPRGIFVIRGDNVVLLGEI 79
>gi|66770685|gb|AAY54654.1| IP04948p [Drosophila melanogaster]
Length = 137
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEI 80
>gi|194881822|ref|XP_001975020.1| GG20797 [Drosophila erecta]
gi|190658207|gb|EDV55420.1| GG20797 [Drosophila erecta]
Length = 137
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEI 80
>gi|195025615|ref|XP_001986091.1| GH21171 [Drosophila grimshawi]
gi|193902091|gb|EDW00958.1| GH21171 [Drosophila grimshawi]
Length = 137
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEI 80
>gi|195429567|ref|XP_002062829.1| GK19486 [Drosophila willistoni]
gi|194158914|gb|EDW73815.1| GK19486 [Drosophila willistoni]
Length = 137
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEI 80
>gi|24656769|ref|NP_611559.1| LSm1 [Drosophila melanogaster]
gi|195346337|ref|XP_002039722.1| GM15742 [Drosophila sechellia]
gi|195486602|ref|XP_002091574.1| GE13737 [Drosophila yakuba]
gi|195585326|ref|XP_002082440.1| GD25220 [Drosophila simulans]
gi|7291257|gb|AAF46688.1| LSm1 [Drosophila melanogaster]
gi|66770707|gb|AAY54665.1| IP04848p [Drosophila melanogaster]
gi|194135071|gb|EDW56587.1| GM15742 [Drosophila sechellia]
gi|194177675|gb|EDW91286.1| GE13737 [Drosophila yakuba]
gi|194194449|gb|EDX08025.1| GD25220 [Drosophila simulans]
gi|220951410|gb|ACL88248.1| CG4279-PA [synthetic construct]
Length = 137
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEI 80
>gi|194754723|ref|XP_001959644.1| GF12971 [Drosophila ananassae]
gi|195123083|ref|XP_002006039.1| GI18766 [Drosophila mojavensis]
gi|190620942|gb|EDV36466.1| GF12971 [Drosophila ananassae]
gi|193911107|gb|EDW09974.1| GI18766 [Drosophila mojavensis]
Length = 137
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVL +TIERIHVGN+YGDIPRG+FIIRGENVVL+GE+
Sbjct: 29 RTLIGYLRSVDQFANLVLQRTIERIHVGNEYGDIPRGVFIIRGENVVLLGEI 80
>gi|389609539|dbj|BAM18381.1| Sm protein G, putative [Papilio xuthus]
Length = 138
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLR VDQFANLVLHKTIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 30 RTLIGYLRCVDQFANLVLHKTIERIHVGKEYGDIPRGIFIVRGENVVLLGEI 81
>gi|312380092|gb|EFR26184.1| hypothetical protein AND_26313 [Anopheles darlingi]
Length = 134
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+FIIRGENVVL+GE+
Sbjct: 27 RTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGEI 78
>gi|91093274|ref|XP_971370.1| PREDICTED: similar to LSM1-like protein [Tribolium castaneum]
gi|270016827|gb|EFA13273.1| hypothetical protein TcasGA2_TC001544 [Tribolium castaneum]
Length = 136
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH TIERIHVG +YGDIPRG+FI+RGENVVL+GE+
Sbjct: 28 RTLIGYLRSVDQFANLVLHHTIERIHVGKEYGDIPRGVFIVRGENVVLLGEI 79
>gi|157136994|ref|XP_001656966.1| Sm protein G, putative [Aedes aegypti]
gi|108884233|gb|EAT48458.1| AAEL000478-PA [Aedes aegypti]
Length = 160
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+FIIRGENVVL+GE+
Sbjct: 53 RTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGEI 104
>gi|156553084|ref|XP_001600131.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Nasonia
vitripennis]
Length = 134
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+TIERIHVG +YGDIPRG+FI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGENVVLLGEI 77
>gi|170047804|ref|XP_001851399.1| CaSm [Culex quinquefasciatus]
gi|167870086|gb|EDS33469.1| CaSm [Culex quinquefasciatus]
Length = 134
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+FIIRGENVVL+GE+
Sbjct: 27 RTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVFIIRGENVVLLGEI 78
>gi|307212313|gb|EFN88119.1| U6 snRNA-associated Sm-like protein LSm1 [Harpegnathos saltator]
Length = 134
Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFAN+VLH+TIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGEI 77
>gi|383861132|ref|XP_003706040.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Megachile
rotundata]
Length = 134
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFAN+VLH+TIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGEI 77
>gi|66529526|ref|XP_624639.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Apis
mellifera]
gi|340709308|ref|XP_003393252.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Bombus
terrestris]
gi|350425090|ref|XP_003494008.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Bombus
impatiens]
gi|380023316|ref|XP_003695469.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Apis
florea]
Length = 134
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFAN+VLH+TIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSVDQFANIVLHRTIERIHVGKEYGDIPRGIFIVRGENVVLLGEI 77
>gi|350593418|ref|XP_003359535.2| PREDICTED: hypothetical protein LOC100627320 [Sus scrofa]
Length = 267
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 160 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 211
>gi|321477585|gb|EFX88543.1| hypothetical protein DAPPUDRAFT_304575 [Daphnia pulex]
Length = 137
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+TIERIHVG +YGDIPRG+FI+RGENV L+GE+
Sbjct: 28 RTLIGYLRSVDQFANLVLHRTIERIHVGKEYGDIPRGVFIVRGENVALLGEI 79
>gi|350539892|ref|NP_001232304.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128059|gb|ACH44557.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128060|gb|ACH44558.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
gi|197128061|gb|ACH44559.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 109 bits (273), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|126303350|ref|XP_001372820.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Monodelphis domestica]
gi|395507426|ref|XP_003758025.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Sarcophilus
harrisii]
Length = 133
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|291228074|ref|XP_002734007.1| PREDICTED: Lsm1 protein-like [Saccoglossus kowalevskii]
Length = 134
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+TIERIHVG +YGDIPRG+F++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHRTIERIHVGKEYGDIPRGVFVVRGENVVLLGEI 77
>gi|327284091|ref|XP_003226772.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Anolis
carolinensis]
Length = 133
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|241999432|ref|XP_002434359.1| clathrin heavy chain, putative [Ixodes scapularis]
gi|215497689|gb|EEC07183.1| clathrin heavy chain, putative [Ixodes scapularis]
Length = 459
Score = 109 bits (273), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLHKTIERIHV QYGDIPRGIF++RG+NVVL+GE+
Sbjct: 28 RTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEI 79
>gi|197128062|gb|ACH44560.1| putative U6 snRNA-associated Sm-like protein LSm1 variant 1
[Taeniopygia guttata]
Length = 133
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|58332084|ref|NP_001011191.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus (Silurana)
tropicalis]
gi|56268999|gb|AAH87559.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
[Xenopus (Silurana) tropicalis]
Length = 133
Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|226372840|gb|ACO52045.1| U6 snRNA-associated Sm-like protein LSm1 [Rana catesbeiana]
Length = 133
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|148886747|ref|NP_001092164.1| LSM1 homolog, U6 small nuclear RNA associated [Xenopus laevis]
gi|146327499|gb|AAI41744.1| LOC100049754 protein [Xenopus laevis]
Length = 133
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|148227316|ref|NP_001090109.1| uncharacterized protein LOC735185 [Xenopus laevis]
gi|76779739|gb|AAI06458.1| MGC131170 protein [Xenopus laevis]
Length = 133
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|417408540|gb|JAA50816.1| Putative small nuclear ribonucleoprotein splicing factor, partial
[Desmodus rotundus]
Length = 195
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 88 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 139
>gi|405961598|gb|EKC27377.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 133
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+TIERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|442751753|gb|JAA68036.1| Putative u6 snrna-associated sm-like protein lsm1 [Ixodes ricinus]
Length = 145
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLHKTIERIHV QYGDIPRGIF++RG+NVVL+GE+
Sbjct: 38 RTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEI 89
>gi|405961597|gb|EKC27376.1| U6 snRNA-associated Sm-like protein LSm1 [Crassostrea gigas]
Length = 124
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+TIERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 17 RTLIGYLRSIDQFANLVLHRTIERIHVGKKYGDIPRGIFVVRGENVVLLGEI 68
>gi|363742099|ref|XP_424387.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gallus gallus]
Length = 133
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|157820263|ref|NP_001102346.1| U6 snRNA-associated Sm-like protein LSm1 [Rattus norvegicus]
gi|149057826|gb|EDM09069.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted) [Rattus norvegicus]
Length = 133
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGRKYGDIPRGIFVVRGENVVLLGEI 77
>gi|440897037|gb|ELR48810.1| U6 snRNA-associated Sm-like protein LSm1, partial [Bos grunniens
mutus]
Length = 118
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 11 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 62
>gi|326932811|ref|XP_003212506.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Meleagris
gallopavo]
Length = 133
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|62988318|ref|NP_001017952.1| U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
gi|296222011|ref|XP_002757005.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Callithrix
jacchus]
gi|75057871|sp|Q5E9Z8.1|LSM1_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|59857841|gb|AAX08755.1| Lsm1 protein [Bos taurus]
gi|59857907|gb|AAX08788.1| Lsm1 protein [Bos taurus]
gi|59857923|gb|AAX08796.1| Lsm1 protein [Bos taurus]
gi|296472336|tpg|DAA14451.1| TPA: U6 snRNA-associated Sm-like protein LSm1 [Bos taurus]
Length = 133
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|290562435|gb|ADD38614.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 49/52 (94%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG LRSVDQ+ANLVLH+ IERIHVGN YGDIPRGIF++RGENVVL+GE+
Sbjct: 28 RTLIGILRSVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGEI 79
>gi|7657313|ref|NP_055277.1| U6 snRNA-associated Sm-like protein LSm1 [Homo sapiens]
gi|114619705|ref|XP_001170479.1| PREDICTED: uncharacterized protein LOC746776 [Pan troglodytes]
gi|291409096|ref|XP_002720830.1| PREDICTED: Lsm1 protein [Oryctolagus cuniculus]
gi|301763723|ref|XP_002917277.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Ailuropoda melanoleuca]
gi|332240911|ref|XP_003269631.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Nomascus
leucogenys]
gi|344281630|ref|XP_003412581.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Loxodonta
africana]
gi|345781536|ref|XP_532806.3| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Canis lupus
familiaris]
gi|348554227|ref|XP_003462927.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Cavia
porcellus]
gi|395847347|ref|XP_003796340.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Otolemur
garnettii]
gi|397521395|ref|XP_003830782.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Pan paniscus]
gi|402878015|ref|XP_003902702.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Papio anubis]
gi|410956402|ref|XP_003984831.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Felis catus]
gi|426256398|ref|XP_004021827.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Ovis aries]
gi|426359374|ref|XP_004046951.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Gorilla
gorilla gorilla]
gi|20177943|sp|O15116.1|LSM1_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm1; AltName:
Full=Cancer-associated Sm-like; AltName: Full=Small
nuclear ribonuclear CaSm
gi|2232057|gb|AAB62189.1| CaSm [Homo sapiens]
gi|5262854|emb|CAB45865.1| Lsm1 protein [Homo sapiens]
gi|12804683|gb|AAH01767.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gi|119583736|gb|EAW63332.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_a [Homo sapiens]
gi|189053287|dbj|BAG35093.1| unnamed protein product [Homo sapiens]
gi|261859266|dbj|BAI46155.1| U6 snRNA-associated Sm-like protein LSm1 [synthetic construct]
gi|351699797|gb|EHB02716.1| U6 snRNA-associated Sm-like protein LSm1 [Heterocephalus glaber]
gi|355697873|gb|EHH28421.1| Cancer-associated Sm-like protein [Macaca mulatta]
gi|355779633|gb|EHH64109.1| Cancer-associated Sm-like protein [Macaca fascicularis]
gi|380811796|gb|AFE77773.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|383412789|gb|AFH29608.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|384943820|gb|AFI35515.1| U6 snRNA-associated Sm-like protein LSm1 [Macaca mulatta]
gi|410210930|gb|JAA02684.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410252368|gb|JAA14151.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410293390|gb|JAA25295.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|410336323|gb|JAA37108.1| LSM1 homolog, U6 small nuclear RNA associated [Pan troglodytes]
gi|431902255|gb|ELK08756.1| U6 snRNA-associated Sm-like protein LSm1 [Pteropus alecto]
Length = 133
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|149742575|ref|XP_001493258.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like [Equus
caballus]
Length = 133
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|354472085|ref|XP_003498271.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Cricetulus griseus]
gi|344238558|gb|EGV94661.1| U6 snRNA-associated Sm-like protein LSm1 [Cricetulus griseus]
Length = 133
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|110625667|ref|NP_080308.1| U6 snRNA-associated Sm-like protein LSm1 [Mus musculus]
gi|20177947|sp|Q8VC85.1|LSM1_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm1
gi|18204794|gb|AAH21460.1| LSM1 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gi|26334347|dbj|BAC30891.1| unnamed protein product [Mus musculus]
gi|148700874|gb|EDL32821.1| mCG14522 [Mus musculus]
Length = 133
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|432099963|gb|ELK28857.1| U6 snRNA-associated Sm-like protein LSm1 [Myotis davidii]
Length = 133
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|118794287|ref|XP_321407.3| AGAP001686-PA [Anopheles gambiae str. PEST]
gi|116116223|gb|EAA00900.3| AGAP001686-PA [Anopheles gambiae str. PEST]
Length = 134
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 45/52 (86%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+TIERIHVGN+YGDI RG+ IIRGENVVL+GE+
Sbjct: 27 RTLIGYLRSVDQFANLVLHRTIERIHVGNEYGDIQRGVVIIRGENVVLLGEI 78
>gi|432874730|ref|XP_004072564.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Oryzias
latipes]
Length = 133
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 77
>gi|348516098|ref|XP_003445576.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Oreochromis niloticus]
Length = 133
Score = 107 bits (266), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 77
>gi|410925290|ref|XP_003976114.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Takifugu
rubripes]
Length = 133
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 77
>gi|47209042|emb|CAF91744.1| unnamed protein product [Tetraodon nigroviridis]
Length = 133
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 77
>gi|349805161|gb|AEQ18053.1| putative u6 snrna-associated sm protein lsm1 [Hymenochirus
curtipes]
Length = 83
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|387915626|gb|AFK11422.1| u6 snRNA-associated Sm-like protein LSm1-like protein
[Callorhinchus milii]
Length = 133
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLH+T+E IHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGYLRSVDQFANLVLHQTVEGIHVGRKYGDIPRGIFVVRGENVVLLGEI 77
>gi|242021605|ref|XP_002431235.1| lsm1, putative [Pediculus humanus corporis]
gi|212516484|gb|EEB18497.1| lsm1, putative [Pediculus humanus corporis]
Length = 139
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQFANLVLHKTIERIHVG +YGDI RG+FI+RGEN+VL+GE+
Sbjct: 31 RTLIGYLRSVDQFANLVLHKTIERIHVGKEYGDIYRGVFIVRGENMVLLGEI 82
>gi|403294428|ref|XP_003938189.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1 [Saimiri
boliviensis boliviensis]
Length = 102
Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|82571526|gb|AAI10195.1| LSM1 protein [Bos taurus]
Length = 95
Score = 105 bits (263), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+T+ERIHVG +YGDIPRGIF++RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVLHQTVERIHVGKKYGDIPRGIFVVRGENVVLLGEI 77
>gi|209733634|gb|ACI67686.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
gi|303661389|gb|ADM16038.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 77
>gi|307172327|gb|EFN63815.1| U6 snRNA-associated Sm-like protein LSm1 [Camponotus floridanus]
Length = 138
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 49/52 (94%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYL+SVDQFAN+VL TIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 30 RTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGEI 81
>gi|209733674|gb|ACI67706.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 133
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEI 77
>gi|322779353|gb|EFZ09609.1| hypothetical protein SINV_06406 [Solenopsis invicta]
Length = 138
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 49/52 (94%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYL+SVDQFAN+VL TIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 30 RTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGEI 81
>gi|332018346|gb|EGI58951.1| U6 snRNA-associated Sm-like protein LSm1 [Acromyrmex echinatior]
Length = 138
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 43/52 (82%), Positives = 49/52 (94%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYL+SVDQFAN+VL TIERIHVG +YGDIPRGIFI+RGENVVL+GE+
Sbjct: 30 RTLIGYLKSVDQFANIVLQSTIERIHVGQEYGDIPRGIFIVRGENVVLLGEI 81
>gi|225713684|gb|ACO12688.1| U6 snRNA-associated Sm-like protein LSm1 [Lepeophtheirus salmonis]
Length = 138
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG LR VDQ+ANLVLH+ IERIHVGN YGDIPRGIF++RGENVVL+GE+
Sbjct: 28 RTLIGILRPVDQYANLVLHRAIERIHVGNDYGDIPRGIFVVRGENVVLLGEI 79
>gi|57525910|ref|NP_001003551.1| U6 snRNA-associated Sm-like protein LSm1 [Danio rerio]
gi|50417210|gb|AAH78334.1| Zgc:101136 [Danio rerio]
Length = 133
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG LRS+DQFANLVLH+T+ERIHVG ++GDIPRGIF++RGENVVL+GEV
Sbjct: 26 RTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIPRGIFVVRGENVVLLGEV 77
>gi|209734138|gb|ACI67938.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 132
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGENVVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGENVVLLGEM 77
>gi|390358403|ref|XP_003729250.1| PREDICTED: LOW QUALITY PROTEIN: U6 snRNA-associated Sm-like protein
LSm1-like [Strongylocentrotus purpuratus]
Length = 134
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 50/54 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEVVT 180
RTLIG LRS+DQFANLVLH+TIERIHVG QYGDIPRG+ ++RGENVVL+GE+ T
Sbjct: 26 RTLIGILRSIDQFANLVLHRTIERIHVGRQYGDIPRGVXVVRGENVVLLGEIDT 79
>gi|156391102|ref|XP_001635608.1| predicted protein [Nematostella vectensis]
gi|156222703|gb|EDO43545.1| predicted protein [Nematostella vectensis]
Length = 138
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 51/52 (98%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANLVL +TIERI+VG++YGDIPRGIF++RGEN+VL+GE+
Sbjct: 26 RTLIGYLRSIDQFANLVLQETIERIYVGDRYGDIPRGIFLVRGENLVLLGEI 77
>gi|324527990|gb|ADY48863.1| U6 snRNA-associated Sm-like protein LSm1 [Ascaris suum]
Length = 141
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 42/52 (80%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLR++DQFANLVLH+T+ERIHV YGDIPRGIF+IRGENVVL GE+
Sbjct: 30 RTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIPRGIFLIRGENVVLAGEI 81
>gi|209737588|gb|ACI69663.1| U6 snRNA-associated Sm-like protein LSm1 [Salmo salar]
Length = 168
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLV H+T+ERIHVG ++GDIPRGIFI+RGE+VVL+GE+
Sbjct: 26 RTLIGFLRSIDQFANLVFHQTVERIHVGKKFGDIPRGIFIVRGESVVLLGEI 77
>gi|196009920|ref|XP_002114825.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
gi|190582887|gb|EDV22959.1| hypothetical protein TRIADDRAFT_58702 [Trichoplax adhaerens]
Length = 137
Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRSVDQFANLVL TIERIHVG QYGDIPRG+F+IRG+NV ++GE+
Sbjct: 30 RTLIGFLRSVDQFANLVLQDTIERIHVGKQYGDIPRGLFVIRGDNVAILGEM 81
>gi|391341680|ref|XP_003745155.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like
[Metaseiulus occidentalis]
Length = 166
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGE 177
R LIG LRS+DQFANLVLH+TIERIHVG +YGDIPRG+FI+RGENVVL+GE
Sbjct: 56 RVLIGILRSIDQFANLVLHRTIERIHVGKKYGDIPRGVFIVRGENVVLLGE 106
>gi|443683303|gb|ELT87602.1| hypothetical protein CAPTEDRAFT_179858 [Capitella teleta]
Length = 136
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 49/52 (94%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG+LRS+DQFANLVLH+TIERIHVG ++G IP GIF+IRGENVVL+GE+
Sbjct: 28 RTLIGFLRSIDQFANLVLHRTIERIHVGKKFGTIPHGIFLIRGENVVLLGEI 79
>gi|340385838|ref|XP_003391415.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANL+L T+ERIHVG +YGDIPRGIF++RGEN+VL GE+
Sbjct: 43 RTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLVRGENMVLCGEI 94
>gi|170578282|ref|XP_001894349.1| U6 snRNA-associated Sm-like protein LSm [Brugia malayi]
gi|158599116|gb|EDP36811.1| U6 snRNA-associated Sm-like protein LSm, putative [Brugia malayi]
gi|402591550|gb|EJW85479.1| LSM1 protein [Wuchereria bancrofti]
Length = 139
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLR++DQFANLVLH+T+ERIHV N YGDI RG+F+IRGENVVL GE+
Sbjct: 30 RTLIGYLRTIDQFANLVLHETLERIHVDNYYGDIERGVFLIRGENVVLAGEI 81
>gi|254281302|ref|NP_001156840.1| LSM1 homolog, U6 small nuclear RNA associated [Acyrthosiphon pisum]
Length = 135
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 50/52 (96%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRSVDQ+ANL+L +T+ERIHVG ++GDIPRG+F++RGENVVL+GE+
Sbjct: 27 RTLIGYLRSVDQYANLLLQQTVERIHVGKKFGDIPRGVFLVRGENVVLLGEI 78
>gi|340376043|ref|XP_003386543.1| PREDICTED: u6 snRNA-associated Sm-like protein LSm1-like
[Amphimedon queenslandica]
Length = 151
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLRS+DQFANL+L T+ERIHVG +YGDIPRGIF++RGEN+VL GE+
Sbjct: 43 RTLIGYLRSIDQFANLLLQDTVERIHVGKKYGDIPRGIFLVRGENMVLCGEI 94
>gi|320169252|gb|EFW46151.1| LSM1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 137
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 47/52 (90%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
R LIG+LRS DQFANLVL TIERI+VG+ YGDIPRGIF+IRGENVVL+GE+
Sbjct: 28 RKLIGFLRSFDQFANLVLQDTIERIYVGDAYGDIPRGIFLIRGENVVLLGEI 79
>gi|312084671|ref|XP_003144370.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
gi|307760468|gb|EFO19702.1| U6 snRNA-associated Sm-family protein LSm [Loa loa]
Length = 139
Score = 97.4 bits (241), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 47/52 (90%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIGYLR++DQFANLVLH+T+ERIHV YGDI RG+F+IRGENVVL GE+
Sbjct: 30 RTLIGYLRTIDQFANLVLHETLERIHVDKYYGDIQRGVFLIRGENVVLAGEI 81
>gi|427777815|gb|JAA54359.1| Putative der and-387 small nuclear ribonucleoprotein splicing
factor [Rhipicephalus pulchellus]
Length = 204
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 50/62 (80%), Gaps = 2/62 (3%)
Query: 117 RQQGLYPNQKRTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMG 176
RQ G P + + RS+DQFANLVLH+TIERIHVG QYGDIPRGIF+IRG+NVVL+G
Sbjct: 56 RQYGDIP--RGIFVXXXRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLG 113
Query: 177 EV 178
E+
Sbjct: 114 EI 115
>gi|313213235|emb|CBY37078.1| unnamed protein product [Oikopleura dioica]
gi|313227656|emb|CBY22803.1| unnamed protein product [Oikopleura dioica]
Length = 135
Score = 96.3 bits (238), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG LR++DQFANLVLH+T+ERIHV +GDIPRGIF++RGENV L GEV
Sbjct: 27 RTLIGILRAIDQFANLVLHQTVERIHVDGFFGDIPRGIFVVRGENVALFGEV 78
>gi|221129197|ref|XP_002167435.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm1-like [Hydra
magnipapillata]
Length = 140
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/52 (76%), Positives = 48/52 (92%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
RTLIG LRSVDQFAN+VL TIERIHVGN+YGDI RG+FI+RG+N+VL+GE+
Sbjct: 31 RTLIGELRSVDQFANVVLENTIERIHVGNKYGDISRGVFIVRGDNIVLLGEM 82
>gi|167520007|ref|XP_001744343.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777429|gb|EDQ91046.1| predicted protein [Monosiga brevicollis MX1]
Length = 126
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 46/52 (88%)
Query: 127 RTLIGYLRSVDQFANLVLHKTIERIHVGNQYGDIPRGIFIIRGENVVLMGEV 178
R LIGYLRSVDQFANLVL T+ER +VGN+YGD+P GI+IIRGENV L+GE+
Sbjct: 32 RKLIGYLRSVDQFANLVLQDTVERYYVGNEYGDVPVGIYIIRGENVALLGEM 83
>gi|281211768|gb|EFA85930.1| hypothetical protein PPL_01163 [Polysphondylium pallidum PN500]
Length = 1358
Score = 45.4 bits (106), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 72/107 (67%), Gaps = 12/107 (11%)
Query: 20 KKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDKKK 79
+K+KEE+ +K++ K+EE + KK EE+K K EEK+ +++KKKE++ +K+EEE+ K
Sbjct: 739 QKQKEEKERKQKLKEEELRMKKLEEQK-----KMEEKQRERQKKKEDEARKREEERAKAA 793
Query: 80 EEKKQKKKEEKKQKKKEEKKQKKKKEEKK-------NKKAEEQNRQQ 119
E++ K EK +KKK +++ ++ E KK NKKA EQ++QQ
Sbjct: 794 EKQLDPKAHEKSEKKKRQEQANREAELKKQQQRLDRNKKALEQSKQQ 840
Score = 43.5 bits (101), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 70/95 (73%), Gaps = 6/95 (6%)
Query: 33 KKEEKKQKKKEEKKQKKKEKKEE------KEEKKEKKKEEKKQKKEEEKDKKKEEKKQKK 86
K++E QK+KEEK++K+K K+EE +E+KK ++K+ ++QKK+E++ +K+EE++ K
Sbjct: 733 KQKELVQKQKEEKERKQKLKEEELRMKKLEEQKKMEEKQRERQKKKEDEARKREEERAKA 792
Query: 87 KEEKKQKKKEEKKQKKKKEEKKNKKAEEQNRQQGL 121
E++ K EK +KKK++E+ N++AE + +QQ L
Sbjct: 793 AEKQLDPKAHEKSEKKKRQEQANREAELKKQQQRL 827
>gi|242038941|ref|XP_002466865.1| hypothetical protein SORBIDRAFT_01g015440 [Sorghum bicolor]
gi|241920719|gb|EER93863.1| hypothetical protein SORBIDRAFT_01g015440 [Sorghum bicolor]
Length = 830
Score = 43.1 bits (100), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
Query: 33 KKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDKKKEEKKQKKKEEKKQ 92
K E++++K ++E++QK++++ EEK++K+E + EEKKQK+E+E ++KK+ K++ + EEKKQ
Sbjct: 663 KPEKEQRKPRQEQQQKEEDRPEEKKQKQEDEPEEKKQKQEDEPEEKKQ-KQEDEPEEKKQ 721
Query: 93 KKKEEKKQKKKKEE 106
K+++E +KK+K+E
Sbjct: 722 KQEDEPGKKKRKQE 735
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 59/74 (79%), Gaps = 4/74 (5%)
Query: 22 KKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDKKKEE 81
K E+E +K ++++++K++ + EEKKQK++++ EEK++K+E + EEKKQK+E+E EE
Sbjct: 663 KPEKEQRKPRQEQQQKEEDRPEEKKQKQEDEPEEKKQKQEDEPEEKKQKQEDE----PEE 718
Query: 82 KKQKKKEEKKQKKK 95
KKQK+++E +KK+
Sbjct: 719 KKQKQEDEPGKKKR 732
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 52/66 (78%), Gaps = 3/66 (4%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKK---KEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEE 73
K ++K ++E+ +K++ + EEKKQK+ EEKKQK++++ EEK++K+E + EEKKQK+E+
Sbjct: 666 KEQRKPRQEQQQKEEDRPEEKKQKQEDEPEEKKQKQEDEPEEKKQKQEDEPEEKKQKQED 725
Query: 74 EKDKKK 79
E KKK
Sbjct: 726 EPGKKK 731
>gi|300637978|gb|ADK26153.1| Ycf1, partial [Deeringothamnus rugelii]
Length = 596
Score = 42.7 bits (99), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 81/112 (72%), Gaps = 7/112 (6%)
Query: 14 RIGKRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEK--KEEKEEKKEKKKEEKKQKK 71
R +++KK+KE N QK+KE+ QK+KE+ QK+KE+ ++EKE+ +K+KE QK+
Sbjct: 285 RYLRQRKKEKERLN---QKEKEQLNQKEKEQLNQKEKEQLNQKEKEQLNQKEKERLNQKE 341
Query: 72 EEEKDKKKEEKKQKKKEEKKQKKKEEKKQKKKKEE--KKNKKAEEQNRQQGL 121
+E +KK++E+ KK++E+ KK++E+ +K+KE+ +KN ++ QN+Q+GL
Sbjct: 342 KERLNKKEKERLNKKEKERLNKKEKEQLNQKEKEQPGQKNLGSDPQNQQKGL 393
>gi|156060715|ref|XP_001596280.1| hypothetical protein SS1G_02500 [Sclerotinia sclerotiorum 1980]
gi|154699904|gb|EDN99642.1| hypothetical protein SS1G_02500 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 141
Score = 42.7 bits (99), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 29 KKQKKKEEKKQKKKEEKKQKKKE--KKEEKEEKKEKKKEEKKQK-KEEEKDKKKEEKKQK 85
KKQ+ KE KKQ+ KE KKQ+ KE K+ KE KK++ KE KKQ+ KE +K + KE KKQ+
Sbjct: 47 KKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQR 106
Query: 86 KKEEKKQKKKEEKKQKKK 103
KE KKQ+ KE KKQ+ K
Sbjct: 107 SKEAKKQRSKEAKKQRSK 124
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Query: 29 KKQKKKEEKKQKKKEEKKQKKKE--KKEEKEEKKEKKKEEKKQK-KEEEKDKKKEEKKQK 85
KKQ+ KE KKQ+ KE KKQ+ KE K+ KE KK++ KE KKQ+ KE +K + KE KKQ+
Sbjct: 55 KKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQR 114
Query: 86 KKEEKKQKKKEEKKQKKK 103
KE KKQ+ KE KKQ+ K
Sbjct: 115 SKEAKKQRSKEAKKQRNK 132
Score = 39.3 bits (90), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 52/73 (71%), Gaps = 3/73 (4%)
Query: 34 KEEKKQKKKEEKKQKKKE--KKEEKEEKKEKKKEEKKQK-KEEEKDKKKEEKKQKKKEEK 90
KE KKQ+ KE KKQ+ KE K+ KE KK++ KE KKQ+ KE +K + KE KKQ+ KE K
Sbjct: 44 KEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAK 103
Query: 91 KQKKKEEKKQKKK 103
KQ+ KE KKQ+ K
Sbjct: 104 KQRSKEAKKQRSK 116
Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%), Gaps = 3/71 (4%)
Query: 29 KKQKKKEEKKQKKKEEKKQKKKE--KKEEKEEKKEKKKEEKKQK-KEEEKDKKKEEKKQK 85
KKQ+ KE KKQ+ KE KKQ+ KE K+ KE KK++ KE KKQ+ KE +K + KE KKQ+
Sbjct: 63 KKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQRSKEAKKQR 122
Query: 86 KKEEKKQKKKE 96
KE KKQ+ KE
Sbjct: 123 SKEAKKQRNKE 133
>gi|389585789|dbj|GAB68519.1| cyclic-nucleotide binding protein [Plasmodium cynomolgi strain B]
Length = 3436
Score = 42.7 bits (99), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 65/98 (66%), Gaps = 19/98 (19%)
Query: 27 NKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEE------------ 74
+ K++K++E K+++++E +K+K++E K E E+++E K E++KQ+K +E
Sbjct: 694 DAKREKQREAKRERQREMEKEKQREIKAEMEKQREMKAEQEKQRKIKEEMERQRIMEEKR 753
Query: 75 -------KDKKKEEKKQKKKEEKKQKKKEEKKQKKKKE 105
K +K EEKKQ+K EEK+Q+K EEK+Q+K +E
Sbjct: 754 KRKMEEKKQRKMEEKKQRKMEEKRQRKMEEKRQRKMEE 791
>gi|170070922|ref|XP_001869756.1| Av71 muscle cell intermediate filament [Culex quinquefasciatus]
gi|167866839|gb|EDS30222.1| Av71 muscle cell intermediate filament [Culex quinquefasciatus]
Length = 523
Score = 42.4 bits (98), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 84/134 (62%), Gaps = 19/134 (14%)
Query: 3 ISIAPK-GAISPRIGKR-----KKKKKEEENKKKQK--KKEEKKQKKKEE--KKQKKKEK 52
+ AP G + R+GK+ + KK+E NKK++ KK+E + KK+E KKQ+ + K
Sbjct: 70 VRTAPNHGCQTERVGKKNEQETRNKKQETRNKKQETRNKKQETRNKKQETRNKKQETRNK 129
Query: 53 KEEKEEKKE---KKKEEKKQKKEEEKDKKKEEKKQKKKEEKKQKKKEEKKQKK----KKE 105
K+E KK+ KK+E + KK+E ++KK+E + KK+E + KK+E + +K+ KK+
Sbjct: 130 KQETRNKKQETRNKKQETRNKKQETRNKKQETRN--KKQETRNKKQETRNKKQETRNKKQ 187
Query: 106 EKKNKKAEEQNRQQ 119
E +NKK E +N++Q
Sbjct: 188 ETRNKKQETRNKKQ 201
>gi|300637994|gb|ADK26161.1| Ycf1, partial [Deeringothamnus pulchellus]
gi|300638014|gb|ADK26171.1| Ycf1, partial [Deeringothamnus pulchellus]
Length = 606
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Query: 14 RIGKRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEK--KEEKEEKKEKKKEEKKQKK 71
R +++KK+KE N QK+KE+ QK+KE+ QK+KE+ ++EKE+ +K+KE QK+
Sbjct: 285 RYLRQRKKEKERLN---QKEKEQLNQKEKEQLNQKEKEQLNQKEKEQLNQKEKERLNQKE 341
Query: 72 EEEKDKKKEEKKQKK-KEEKKQKKKEEKKQKKKKEE-KKNKKAEEQNRQQGL 121
+E +KK++E+ KK KE QK+KE+ QK+K++ +KN ++ QN+Q+GL
Sbjct: 342 KERLNKKEKERLNKKEKERLNQKEKEQLNQKEKEQPGQKNLGSDPQNQQKGL 393
>gi|428173027|gb|EKX41932.1| hypothetical protein GUITHDRAFT_141669 [Guillardia theta CCMP2712]
Length = 888
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 89/121 (73%), Gaps = 16/121 (13%)
Query: 19 KKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEK------KEEKEEKKEKKKEEKKQKKE 72
++K KE+E ++K K++EE+++ K++E+++K KE+ KE++E++K K++EE+++ KE
Sbjct: 57 QRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKE 116
Query: 73 EE---KDKKKEEKKQKKKEEKKQKKKEEKKQKKKKEEKKNKKAEEQNRQQGL-------Y 122
+E K K++EE+++ K++E+++K KE+++Q+K KE+++ +K +EQ Q+ L Y
Sbjct: 117 QEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKDLLAMEY 176
Query: 123 P 123
P
Sbjct: 177 P 177
Score = 40.4 bits (93), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 96/128 (75%), Gaps = 10/128 (7%)
Query: 4 SIAPKGAISP--RIGKRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEK-----KEEK 56
++A + P R+ + +++K+EEE +K ++++E++K K++EE+++ K+++ KE++
Sbjct: 32 AVAHLVELCPCSRMVEIRQEKREEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQE 91
Query: 57 EEKKEKKKEEKKQKKEEE---KDKKKEEKKQKKKEEKKQKKKEEKKQKKKKEEKKNKKAE 113
E++K K++EE+++ KE+E K K++EE+++ K++E+++K KE+++Q+K KE+++ +K +
Sbjct: 92 EQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLKEQEEQRKLK 151
Query: 114 EQNRQQGL 121
EQ Q+ L
Sbjct: 152 EQEEQRKL 159
>gi|260834587|ref|XP_002612291.1| hypothetical protein BRAFLDRAFT_122528 [Branchiostoma floridae]
gi|229297668|gb|EEN68300.1| hypothetical protein BRAFLDRAFT_122528 [Branchiostoma floridae]
Length = 2617
Score = 40.4 bits (93), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 20 KKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDKKK 79
+KK EEE K + +E +Q +E+ K KK+ ++ +KE +K K ++ E++KDK +
Sbjct: 356 RKKFEEEQKTWNRLQEMHEQALREDAKYKKRLSFDDWNRQKELEKIHKMEEHEDDKDKNQ 415
Query: 80 E-EKKQKKKEEKKQKKKEEKKQKKKKEEKKNKKAEEQNRQQGL 121
+ E++QK E+ QK K+Q++ ++E++ +K E++ Q+ L
Sbjct: 416 QKERRQKMSAEEYQKWVLRKEQEELEKERQKQKEAEKDYQRWL 458
>gi|300638036|gb|ADK26182.1| Ycf1, partial [Disepalum pulchrum]
Length = 668
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 6/101 (5%)
Query: 17 KRKKKKKEEENKK---KQKKKEEKKQKKKEEKKQKKKEKKEE--KEEKKEKKKEEKKQKK 71
K+ KKK+ +NKK Q KKE+ Q KKE+ Q KKE+ + KE+ + KKE+ Q K
Sbjct: 348 KQNKKKRLNQNKKEQLNQNKKEQLNQNKKEQLNQNKKEQLNQNKKEQLNQNKKEQLNQNK 407
Query: 72 EEEKDKK-KEEKKQKKKEEKKQKKKEEKKQKKKKEEKKNKK 111
+E+ ++K KE+ QK+KE+ QK+KE+ QK+K++ +NKK
Sbjct: 408 KEQLNQKEKEQLNQKEKEQLNQKEKEQLNQKEKEQLNQNKK 448
>gi|449275918|gb|EMC84654.1| Translation initiation factor IF-2 [Columba livia]
Length = 640
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 386 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 445
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 446 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 499
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 397 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 456
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 457 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 510
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 408 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 467
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 468 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 521
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 419 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 478
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 479 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 532
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 430 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 489
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 490 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 543
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 441 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 500
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 501 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 554
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 452 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 511
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 512 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 565
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 463 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 522
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 523 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 576
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 474 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 533
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 534 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 587
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 485 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 544
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 545 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 598
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 496 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 555
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 556 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 609
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 507 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 566
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 567 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 620
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 82/115 (71%), Gaps = 12/115 (10%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 518 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 577
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKK-----KEEKKNKKA---EEQNRQQG 120
EK++K+ +K +KEEK+++K EK++K++ KEEK+ +K EE+ R++G
Sbjct: 578 EKEEKR-RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKG 631
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 73/101 (72%), Gaps = 13/101 (12%)
Query: 17 KRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKK---KEEKKQKKEE 73
+RK +KEE+ ++K +KEEK+++K EK++K++ K EKEEK+ +K KEEK+++K
Sbjct: 540 RRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGG 599
Query: 74 EKDKK-------KEEKKQKK---KEEKKQKKKEEKKQKKKK 104
EK++K KEEK+++K KEEK+++K EK++K+KK
Sbjct: 600 EKEEKRRRKGGEKEEKRRRKGGEKEEKRRRKGGEKEEKRKK 640
>gi|198476752|ref|XP_002132434.1| GA25185 [Drosophila pseudoobscura pseudoobscura]
gi|198137836|gb|EDY69836.1| GA25185 [Drosophila pseudoobscura pseudoobscura]
Length = 4986
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 59/75 (78%), Gaps = 1/75 (1%)
Query: 24 EEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDKKKEEKK 83
+ E+K+K+K E+K + +++K+KE+K +EEK++++K +++++KE ++ K KEEK+
Sbjct: 1035 QPEDKEKEKAHPERK-TQTHHQEEKEKERKSHQEEKEKERKAQQQEEKERDERKAKEEKE 1093
Query: 84 QKKKEEKKQKKKEEK 98
+K +EE++QK+++EK
Sbjct: 1094 RKAQEEREQKERDEK 1108
>gi|241955721|ref|XP_002420581.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223643923|emb|CAX41660.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 1042
Score = 38.1 bits (87), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 18 RKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEE---E 74
++KK+E+ +KKQ+ E KKQ+ E KKQ+ E+K++++ + EK+KE +++K+E+ E
Sbjct: 729 HERKKQEDHERKKQEDHERKKQEDHERKKQEDHERKKQEDHEHEKQKEHERKKQEDHEHE 788
Query: 75 KDKKKEEKKQKKKEEKKQKKKEEKKQKKKKEEKKN 109
K K+ E KKQ+ E +KQK+ E KKQ+ + EK++
Sbjct: 789 KQKEHERKKQEDHEHEKQKEHERKKQEDHEREKED 823
Score = 36.2 bits (82), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 10/100 (10%)
Query: 13 PRIGKRKK-----KKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEK 67
P++ RKK KK+E+ +KKQ+ E KKQ+ E KKQ+ E+K K+E E+KK+E
Sbjct: 711 PKVIDRKKQDHERKKQEDHERKKQEDHERKKQEDHERKKQEDHERK--KQEDHERKKQE- 767
Query: 68 KQKKEEEKDKKKEEKKQKKKEEKKQKKKEEKKQKKKKEEK 107
E EK K+ E KKQ+ E +KQK+ E KKQ+ + EK
Sbjct: 768 --DHEHEKQKEHERKKQEDHEHEKQKEHERKKQEDHEHEK 805
>gi|403218547|emb|CCK73037.1| hypothetical protein KNAG_0M01840 [Kazachstania naganishii CBS
8797]
Length = 1291
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 68/99 (68%), Gaps = 15/99 (15%)
Query: 32 KKKEEKKQKKKEEKKQKKKE--KKEEKEEKKEKKKEEKKQKKEEE-----------KDKK 78
+K EE ++KK EE+K+K +E K+EE +E + K KEE+K+K++EE K++K
Sbjct: 672 RKVEESRRKKDEERKRKLEEQRKREEIQENQRKLKEEQKRKRDEERKQKELEQKRIKEQK 731
Query: 79 KEEKKQKKKEEK--KQKKKEEKKQKKKKEEKKNKKAEEQ 115
+ E+++K EEK K++K E ++QK ++EE++ KK EE+
Sbjct: 732 RLEQERKAAEEKRIKEQKLEAERQKIREEEERQKKLEEE 770
>gi|321467016|gb|EFX78008.1| hypothetical protein DAPPUDRAFT_105663 [Daphnia pulex]
Length = 4511
Score = 37.7 bits (86), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 22 KKEEENKKKQKKKEEKK--QKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDK-- 77
K+EEE ++ QK+ EEK QK+ EEK + KEK+E++ +KE +++++ QK+ EEKD+
Sbjct: 2427 KEEEEKQRIQKESEEKDRLQKETEEKDRLLKEKEEKQRMQKESEEKDRLQKEAEEKDRLL 2486
Query: 78 KKEEKK---QKKKEEKK--QKKKEEKKQKKKKEEKK---NKKAEEQNRQQ 119
K+EE+K QK+ EEK QK+ EEK + K+EE+K K++EE++R Q
Sbjct: 2487 KEEEEKRRIQKESEEKDRLQKETEEKDRLLKEEEEKQRMQKESEEKDRLQ 2536
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 22 KKEEENKKKQKKKEEKK--QKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKD--- 76
K+EEE ++ QK+ EEK QK+ EEK + KE++E++ +KE +++++ QK+ EEKD
Sbjct: 2397 KEEEEKQRIQKESEEKDRLQKEAEEKDRLLKEEEEKQRIQKESEEKDRLQKETEEKDRLL 2456
Query: 77 KKKEEKKQKKKE----EKKQKKKEEKKQKKKKEEKK---NKKAEEQNRQQ 119
K+KEEK++ +KE ++ QK+ EEK + K+EE+K K++EE++R Q
Sbjct: 2457 KEKEEKQRMQKESEEKDRLQKEAEEKDRLLKEEEEKRRIQKESEEKDRLQ 2506
Score = 36.6 bits (83), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 22 KKEEENKKKQKKKEEKK--QKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDK-- 77
K+EEE ++ QK+ EEK QK+ EEK + KE++E++ +KE +++++ QK+ EEKD+
Sbjct: 2277 KEEEEKRRIQKESEEKDRLQKEAEEKDRLLKEEEEKRRIQKESEEKDRLQKEAEEKDRLL 2336
Query: 78 KKEEKKQ---KKKEEKK--QKKKEEKKQKKKKEEKK---NKKAEEQNRQQ 119
K+EE+KQ K+ EEK QK+ EEK + K+EE+K K++EE++R Q
Sbjct: 2337 KEEEEKQRIQKESEEKDRLQKEAEEKDRLLKEEEEKQRIQKESEEKDRLQ 2386
Score = 36.2 bits (82), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 77/110 (70%), Gaps = 12/110 (10%)
Query: 22 KKEEENKKKQKKKEEKK--QKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDK-- 77
K+EEE ++ QK+ EEK QK+ EEK + KE++E++ +KE +++++ QK+ EEKD+
Sbjct: 2307 KEEEEKRRIQKESEEKDRLQKEAEEKDRLLKEEEEKQRIQKESEEKDRLQKEAEEKDRLL 2366
Query: 78 KKEEKKQ---KKKEEKK--QKKKEEKKQKKKKEEKK---NKKAEEQNRQQ 119
K+EE+KQ K+ EEK QK+ EEK + K+EE+K K++EE++R Q
Sbjct: 2367 KEEEEKQRIQKESEEKDRLQKEAEEKDRLLKEEEEKQRIQKESEEKDRLQ 2416
>gi|326427171|gb|EGD72741.1| hypothetical protein PTSG_04470 [Salpingoeca sp. ATCC 50818]
Length = 859
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 91/158 (57%), Gaps = 24/158 (15%)
Query: 34 KEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEKDKKKEEKKQKKKEEKKQK 93
K E++++K++EKK++++ +++EK+E++E++++EKK+++E+ + + +E+++Q+ ++ +
Sbjct: 679 KREQRERKRQEKKEQRERERQEKKEQRERERQEKKEQREQRQRELQEKREQQLRKRCARA 738
Query: 94 KKEEKKQKKKKEEKKNKKAEEQNRQQGLYPNQKRTLIGYLRSVDQFANLVLHKTIERIHV 153
+ + ++Q+ ++ K++K+ E +NR+ LV + I+R V
Sbjct: 739 RAKRERQEARERSKRHKQEERENRR---------------------IELVALRRIQR-RV 776
Query: 154 GNQYGDIPRGIFIIRGENVVLM--GEVVTVVNVKVIKG 189
Q GD ++ R VL+ GEV ++ +G
Sbjct: 777 RTQDGDTGTVVWFTRARATVLLDTGEVKAFPFSQLFRG 814
>gi|118379597|ref|XP_001022964.1| TPR Domain containing protein [Tetrahymena thermophila]
gi|89304731|gb|EAS02719.1| TPR Domain containing protein [Tetrahymena thermophila SB210]
Length = 2086
Score = 37.4 bits (85), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 79/104 (75%), Gaps = 8/104 (7%)
Query: 19 KKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKE-----KKEEKEEKKEKKKEEKKQKKEE 73
KKK +E E+KK+Q++ EEK+++++ E K+K +E K++E EEK+++++ E+K+K++E
Sbjct: 810 KKKLQESEDKKRQQEIEEKRKQQEAEDKKKLQEAEERKKQQEAEEKRKQQEAEEKRKQQE 869
Query: 74 EKDKKKEEKKQKKKEEKKQKKKEEKKQKKKKEEKKNKKAEEQNR 117
+DKK++ Q+ +E+KKQ++ EEKK+ ++ EE K K+ E+N+
Sbjct: 870 AEDKKRQ---QEAEEKKKQQEAEEKKKIQEAEELKLKQQAEENK 910
>gi|50311997|ref|XP_456030.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645166|emb|CAG98738.1| KLLA0F21164p [Kluyveromyces lactis]
Length = 420
Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 15/117 (12%)
Query: 19 KKKKKEEENKKKQKKKEEKKQKK--KEEKKQKKKEKKEEKEEKKEKK------KEEKKQK 70
KK+ K+E+ + K +KK K +KK K+EKKQ K EKK K+EKK K K+EKKQ
Sbjct: 260 KKQPKDEKKQPKDEKKHSKDEKKQPKDEKKQPKDEKKHSKDEKKHSKDEKKHSKDEKKQP 319
Query: 71 KEE---EKDKKKEEKKQKK--KEEKKQKKKEEKKQKKKKEEKKN--KKAEEQNRQQG 120
K+E KD+KK K +KK K+EKK K E+K K +K+ K+ K A+ +N Q+G
Sbjct: 320 KDEKKHSKDEKKHSKDEKKHSKDEKKHSKDEKKHSKDEKKHSKDEEKHAKSENSQKG 376
Score = 36.6 bits (83), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 7/103 (6%)
Query: 14 RIGKRKKKKKEEENKKKQKKKEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEE 73
+ GK+ K +E+ + K +EKKQ K +EKKQ K EKK K+EKK K+EKKQ K+E
Sbjct: 209 KWGKKHHKGHKEDREHDDKGDDEKKQPK-DEKKQPKDEKKHSKDEKKH-SKDEKKQPKDE 266
Query: 74 ---EKDKKKEEKKQKK--KEEKKQKKKEEKKQKKKKEEKKNKK 111
KD+KK K +KK K+EKKQ K E+K K +K+ K++K
Sbjct: 267 KKQPKDEKKHSKDEKKQPKDEKKQPKDEKKHSKDEKKHSKDEK 309
>gi|288802976|ref|ZP_06408412.1| putative penicillin-binding protein 2 [Prevotella melaninogenica
D18]
gi|288334493|gb|EFC72932.1| putative penicillin-binding protein 2 [Prevotella melaninogenica
D18]
Length = 788
Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 44 EKKQKKKEKKEEKEEKKEKKKEEKKQK-KEEEKDKKKEEKKQKKKEEKKQKKKEEKKQKK 102
E K+K K K++ KE+ K+K KE+ K K KE+ K+K KE+ K K KE+ K K KE+ K+K
Sbjct: 711 ENKEKPKVKEKSKEQSKDKAKEQPKVKSKEQAKEKPKEQPKAKPKEQVKDKAKEQPKEKS 770
Query: 103 KKEEKKNKKAEE 114
K + +K++E
Sbjct: 771 KGQSNDKQKSKE 782
>gi|219990761|gb|ACL68754.1| RE47545p [Drosophila melanogaster]
Length = 749
Score = 36.6 bits (83), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 90/133 (67%), Gaps = 25/133 (18%)
Query: 3 ISIAPKGAISP---RIGKRKKKKKEEENKKKQKKKEEK--KQKKKEEKKQKKKEKKEEKE 57
++ APKG ++P R+ +++KK +EE K+QK EE+ KQ+ KE ++Q+KK++++EKE
Sbjct: 45 VTGAPKG-LTPKQQRLMEQRKKAREE---KEQKLAEERRLKQQDKEHREQQKKQERDEKE 100
Query: 58 EKKEKKKEEKKQK-----------KEEEKDKKKEEKKQK--KKEEKKQKKKEEKK---QK 101
++++ ++++K+Q+ ++ E D K EEK+++ KEE ++KK EE++ Q+
Sbjct: 101 QQRKLERDQKEQQRKMEKEEKERKRQAEVDSKNEEKRKRNEAKEEVQRKKDEERRKKEQE 160
Query: 102 KKKEEKKNKKAEE 114
+++ E+K K+A E
Sbjct: 161 REEAEQKKKRAAE 173
>gi|423389893|ref|ZP_17367119.1| hypothetical protein ICG_01741 [Bacillus cereus BAG1X1-3]
gi|401641984|gb|EJS59701.1| hypothetical protein ICG_01741 [Bacillus cereus BAG1X1-3]
Length = 385
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 26/190 (13%)
Query: 34 KEEKKQKKKEEKKQKKKEKKEEKEEKKEKKKEEKKQKKEEEK---DKKKEEKKQKKKEEK 90
K E++QK KE+K+ + K+K EEK+ +E+KK E KQK EE+K ++KK E KQK +E+K
Sbjct: 150 KAEEEQKAKEQKEAEDKQKAEEKKLAEEQKKAEDKQKAEEKKLAEEQKKAEDKQKAEEKK 209
Query: 91 KQKKKEEKKQKKKKEEKK----NKKAEEQNRQQGLYPNQKR--TLIGYLRSVDQFANLVL 144
+++++ + K+K EEKK KKAEE+ ++ Y R I ++ + A +
Sbjct: 210 LAEEQKKAENKQKTEEKKLAEEQKKAEEKQKEFASYAQNIRGGNFIKDMKLSNNEAEITF 269
Query: 145 HKTIERIHVGN--------QY------GDIPRGIFIIRGENVVLMGEVVTVVNVKVIKGG 190
H + N QY GD +F+ E L+ + + VK+
Sbjct: 270 HDSFSSYKSANPTSLNTEEQYKQYFSTGDAIEKMFV--SEPARLLRQFPDLNTVKITLPF 327
Query: 191 DSGKKWLRGV 200
D GK + +
Sbjct: 328 D-GKTYSTSL 336
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.301 0.124 0.316
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,448,991,074
Number of Sequences: 23463169
Number of extensions: 206578762
Number of successful extensions: 28960354
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 201208
Number of HSP's successfully gapped in prelim test: 54049
Number of HSP's that attempted gapping in prelim test: 10646509
Number of HSP's gapped (non-prelim): 7869122
length of query: 213
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 77
effective length of database: 9,168,204,383
effective search space: 705951737491
effective search space used: 705951737491
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 73 (32.7 bits)