BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy556
MGRRIAVKCNNLISNFKGLENGLVQGSSLSTLLFAVFMNDIFHVINLPTRGLLFVDDLLL
TIRGKILEQLGSRNPTLPLIMLNGNQLKFDNTAKFLGLIWDRKMSWKQHVKYTKIKALTA
LNALKIVMLDYGSPIYGSAKDHVIAKLNTEHHIGIRIVTGALRTSPVPSLYVESGIPPLV
IRRQKLLLNYVTKISACPSNPVYNILFPTSLRRRLGIYEFTRTPKPLFVRFRAIEAYVQE
LDRCDMMEYKDLTPPWSDDMSEVIDLWRNLTSNNIKLTFIWCPSHCGIEGNEEVDRAANR
DGHTQAINICSPDDLKTMVKKLAYNNWQVLWNQTDPLNKLKQIKPIISTWKTSQQSRRYD
EVVLSRLRIGHTRVTHSYLFERTTPPLCSCGENLLTVKHLLDCVHHAPVRSTLSSKPSLL
DEPEGVKATNANVKK

High Scoring Gene Products

Symbol, full name Information P value

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy556
        (435 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ASPGD|ASPL0000075333 - symbol:AN10625 species:162425 "Eme...   131  2.3e-05   1
ASPGD|ASPL0000033911 - symbol:AN2796 species:162425 "Emer...    88  0.00044   4


>ASPGD|ASPL0000075333 [details] [associations]
            symbol:AN10625 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 EMBL:BN001303 GO:GO:0004523
            EnsemblFungi:CADANIAT00005305 Uniprot:C8V7Z8
        Length = 486

 Score = 131 (51.2 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 43/165 (26%), Positives = 71/165 (43%)

Query:   275 IKLTFIWCPSHCGIEGNEEVDRAANRD-------GHTQAINICSPDDLKTMVKKLAYNNW 327
             + + F W P+H G+EGNE+ DR A          GH   + I S   +K    ++    W
Sbjct:   284 LNVHFRWIPAHRGVEGNEQADRRAKEATGWRRIRGHRGRMTIRSA--VKRRAHEVVNARW 341

Query:   328 QVLWNQTDPLNKLKQIKPIIS--TWKTSQQSRRYDEVVLSRLRIGHTRVTHSYLFERTTP 385
             +  W       +L ++ P  +    +  Q   R    ++ ++R G   + H YL++R  P
Sbjct:   342 ENDWKSCHHGRELYELTPTPTRKVLRVHQDLHRALSTIIVQMRTGKIGLRH-YLYQRGVP 400

Query:   386 PL----CSCGENLLTVKH-LLDCVHHAPVRSTLSSKPSLLDEPEG 425
              +    C CG    +V+H LL C   + +R  +    S   E EG
Sbjct:   401 DVPNSDCQCGRATQSVRHILLACPTFSGLREEIFGGRSGGPEGEG 445


>ASPGD|ASPL0000033911 [details] [associations]
            symbol:AN2796 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006278
            "RNA-dependent DNA replication" evidence=IEA] [GO:0003964
            "RNA-directed DNA polymerase activity" evidence=IEA] [GO:0003723
            "RNA binding" evidence=IEA] [GO:0004523 "ribonuclease H activity"
            evidence=IEA] InterPro:IPR000477 InterPro:IPR002156
            InterPro:IPR012337 Pfam:PF00075 Pfam:PF00078 PROSITE:PS50878
            PROSITE:PS50879 EMBL:BN001306 GO:GO:0003723 SUPFAM:SSF53098
            GO:GO:0003964 GO:GO:0006278 GO:GO:0004523 EMBL:AACD01000049
            HOGENOM:HOG000137572 OrthoDB:EOG4N8VCV RefSeq:XP_660400.1
            ProteinModelPortal:Q5B9I4 EnsemblFungi:CADANIAT00010307
            GeneID:2873721 KEGG:ani:AN2796.2 OMA:MAHDHES Uniprot:Q5B9I4
        Length = 686

 Score = 88 (36.0 bits), Expect = 0.00044, Sum P(4) = 0.00044
 Identities = 37/130 (28%), Positives = 50/130 (38%)

Query:   281 WCPSHCGIEGNEEVDRAANRDGHTQAINIC-SPDDLKTMVKK-LAYNNWQVLWNQTDPLN 338
             W P H GI GNE  D+ A       + NI  SP  L+   K+ L    +    ++     
Sbjct:   503 WIPGHSGIAGNELADKLAKLGSSIYSPNIPPSPAYLRREAKQWLRTEAYTAYASKAPQAY 562

Query:   339 KLKQIKPIISTWKTSQQSRRYDEVVLSRL---RIGHTRVT--HSYLFERTTPPLCSCGEN 393
             K   I+P   T ++  +  +    VL RL   R GH   T  H           CSCG+ 
Sbjct:   563 KTLDIRP--HTKESRTREHKLPRWVLGRLVAARTGHGDFTAYHQRFNHSDYLESCSCGKT 620

Query:   394 LLTVKHLLDC 403
                V H   C
Sbjct:   621 KTPV-HFFFC 629

 Score = 65 (27.9 bits), Expect = 0.00044, Sum P(4) = 0.00044
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query:     2 GRRIAVKCNNLISNFKGLENGLVQGSSLSTLLFAVFMNDIFHVINLPTRGLLFVDDLLLT 61
             GR ++V      +    ++ GL QGS LS +LF ++   I   +        + DD+ + 
Sbjct:   123 GRSVSVHIKESTATAP-IKGGLPQGSPLSPILFLLYAARIISTLE---SSFCYADDMGIL 178

Query:    62 IRGKILEQ 69
             + G  LE+
Sbjct:   179 LTGNTLEE 186

 Score = 49 (22.3 bits), Expect = 0.00044, Sum P(4) = 0.00044
 Identities = 9/36 (25%), Positives = 22/36 (61%)

Query:    78 PLIMLNG-NQLKFDNTAKFLGLIWDRKMSWKQHVKY 112
             P++ L G  ++      ++LG++ D K+++K H+ +
Sbjct:   228 PIVTLPGIGEITPSLYTRWLGVLLDTKLTFKAHINW 263

 Score = 42 (19.8 bits), Expect = 0.00044, Sum P(4) = 0.00044
 Identities = 11/49 (22%), Positives = 23/49 (46%)

Query:   131 YGSPIY--GSAKDHVIAKLNTEHHIGIRIVTGALRTSPVPSLYVESGIP 177
             YG+ ++  G  +  V+  L +        +  A +T+P  +L  E+ +P
Sbjct:   304 YGAEVFYTGKRQQWVVNSLLSLFRTAALAIIPAYKTTPTAALLREADLP 352


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.137   0.419    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      435       435   0.00087  118 3  11 22  0.37    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  624 (66 KB)
  Total size of DFA:  287 KB (2149 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  34.55u 0.10s 34.65t   Elapsed:  00:00:10
  Total cpu time:  34.55u 0.10s 34.65t   Elapsed:  00:00:11
  Start:  Thu Aug 15 17:26:30 2013   End:  Thu Aug 15 17:26:41 2013

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