Your job contains 1 sequence.
>psy5569
MDAFGDNFDDNVDPAAEFLAREQNQLAGLEDELQPAVAVNATINGMTNSLLFLNAEKQFV
AEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKKD
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5569
(110 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0024814 - symbol:Clc "Clathrin light chain" specie... 198 3.0e-24 2
UNIPROTKB|Q5ZHR7 - symbol:CLTA "Uncharacterized protein" ... 192 5.2e-21 2
UNIPROTKB|E2RPI8 - symbol:CLTA "Uncharacterized protein" ... 191 2.2e-20 2
UNIPROTKB|F5H6N3 - symbol:CLTA "Clathrin light chain A" s... 191 2.2e-20 2
ZFIN|ZDB-GENE-040426-1986 - symbol:clta "clathrin, light ... 188 2.8e-20 2
UNIPROTKB|P04975 - symbol:CLTB "Clathrin light chain B" s... 179 3.9e-19 2
UNIPROTKB|F6X5M3 - symbol:CLTB "Uncharacterized protein" ... 179 3.9e-19 2
UNIPROTKB|P09497 - symbol:CLTB "Clathrin light chain B" s... 179 3.9e-19 2
MGI|MGI:1921575 - symbol:Cltb "clathrin, light polypeptid... 179 3.9e-19 2
RGD|621353 - symbol:Cltb "clathrin, light chain B" specie... 179 3.9e-19 2
UNIPROTKB|E1C6S9 - symbol:CLTB "Uncharacterized protein" ... 177 6.4e-19 2
UNIPROTKB|G3N252 - symbol:CLTB "Clathrin light chain B" s... 177 6.4e-19 2
UNIPROTKB|E2R2G2 - symbol:CLTB "Uncharacterized protein" ... 177 6.4e-19 2
UNIPROTKB|F1NUW5 - symbol:CLTB "Uncharacterized protein" ... 175 1.0e-18 2
MGI|MGI:894297 - symbol:Clta "clathrin, light polypeptide... 198 7.7e-16 1
UNIPROTKB|E2RPI9 - symbol:CLTA "Uncharacterized protein" ... 192 3.3e-15 1
UNIPROTKB|C9J8P9 - symbol:CLTA "Clathrin light chain A" s... 192 3.3e-15 1
UNIPROTKB|P09496 - symbol:CLTA "Clathrin light chain A" s... 192 3.3e-15 1
RGD|70919 - symbol:Clta "clathrin, light chain A" species... 192 3.3e-15 1
UNIPROTKB|P04973 - symbol:CLTA "Clathrin light chain A" s... 188 8.8e-15 1
UNIPROTKB|D6RJD1 - symbol:CLTB "Clathrin light chain B" s... 178 1.0e-13 1
ASPGD|ASPL0000043860 - symbol:AN2050 species:162425 "Emer... 83 1.8e-05 2
DICTYBASE|DDB_G0277403 - symbol:clc "clathrin light chain... 88 0.00077 1
>FB|FBgn0024814 [details] [associations]
symbol:Clc "Clathrin light chain" species:7227 "Drosophila
melanogaster" [GO:0005905 "coated pit" evidence=ISS;NAS;TAS]
[GO:0030125 "clathrin vesicle coat" evidence=ISS;TAS] [GO:0005326
"neurotransmitter transporter activity" evidence=ISS] [GO:0030132
"clathrin coat of coated pit" evidence=ISS] [GO:0006836
"neurotransmitter transport" evidence=ISS] [GO:0016183 "synaptic
vesicle coating" evidence=ISS;TAS] [GO:0007269 "neurotransmitter
secretion" evidence=ISS;NAS] [GO:0030135 "coated vesicle"
evidence=TAS] [GO:0008021 "synaptic vesicle" evidence=TAS]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030136 "clathrin-coated vesicle" evidence=IDA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0006886 EMBL:AE014296 GO:GO:0005198 GO:GO:0008021
GO:GO:0005905 GO:GO:0007269 GO:GO:0030130 GO:GO:0016183
GO:GO:0030132 GO:GO:0030125 PANTHER:PTHR10639 eggNOG:NOG312397
GeneTree:ENSGT00390000010441 EMBL:AF055900 EMBL:AY121633
RefSeq:NP_001163480.1 RefSeq:NP_001163481.1 RefSeq:NP_524178.2
UniGene:Dm.2515 DIP:DIP-20236N IntAct:Q9VWA1 MINT:MINT-1602526
STRING:Q9VWA1 PaxDb:Q9VWA1 PRIDE:Q9VWA1 EnsemblMetazoa:FBtr0074830
EnsemblMetazoa:FBtr0300813 EnsemblMetazoa:FBtr0301126
EnsemblMetazoa:FBtr0332771 GeneID:40221 KEGG:dme:Dmel_CG6948
CTD:1178 FlyBase:FBgn0024814 InParanoid:Q9VWA1 OMA:MRSIYLH
OrthoDB:EOG47M0F5 PhylomeDB:Q9VWA1 GenomeRNAi:40221 NextBio:817643
Bgee:Q9VWA1 GermOnline:CG6948 Uniprot:Q9VWA1
Length = 219
Score = 198 (74.8 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 40/56 (71%), Positives = 43/56 (76%)
Query: 54 NAEKQFVA-EVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLK 108
NAEKQ E IEPGTEWERIAKLCDFNPKV + KDVSRMRSI L LKQ P++
Sbjct: 159 NAEKQAATLENGTIEPGTEWERIAKLCDFNPKVNKAGKDVSRMRSIYLHLKQNPIQ 214
Score = 94 (38.1 bits), Expect = 3.0e-24, Sum P(2) = 3.0e-24
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 1 MDAFGDNF--DDNVDPAAEFLAREQNQLAGLEDEL 33
MD FGD+F ++VDPAAEFLAREQ+ L LE E+
Sbjct: 1 MD-FGDDFAAKEDVDPAAEFLAREQSALGDLEAEI 34
>UNIPROTKB|Q5ZHR7 [details] [associations]
symbol:CLTA "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00581 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 GO:GO:0030130 GO:GO:0030132
PANTHER:PTHR10639 eggNOG:NOG312397 CTD:1211
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 KO:K04644 OMA:ESNGPSD OrthoDB:EOG4TF0M2
EMBL:AADN02065324 EMBL:AADN02065325 EMBL:AADN02065326 EMBL:AJ721067
IPI:IPI00594350 RefSeq:NP_001034402.1 UniGene:Gga.4834
STRING:Q5ZHR7 Ensembl:ENSGALT00000024737 GeneID:427284
KEGG:gga:427284 InParanoid:Q5ZHR7 NextBio:20828568 Uniprot:Q5ZHR7
Length = 215
Score = 192 (72.6 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
AE+ FV++ +D+ PGTEWER+A+LCDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 161 AEEAFVSDAEDVFPGTEWERVAQLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 213
Score = 69 (29.3 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 11/20 (55%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA+++N++AG+E++
Sbjct: 27 DPAAAFLAQQENEIAGIEND 46
>UNIPROTKB|E2RPI8 [details] [associations]
symbol:CLTA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0030130 GO:GO:0030132 PANTHER:PTHR10639
GeneTree:ENSGT00390000010441 KO:K04644 EMBL:AAEX03007962
RefSeq:XP_003639440.1 Ensembl:ENSCAFT00000003598 GeneID:100856559
KEGG:cfa:100856559 NextBio:20850719 Uniprot:E2RPI8
Length = 218
Score = 191 (72.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
AE+ FV ++D+ PGTEWER+A+LCDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 164 AEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 216
Score = 64 (27.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 30 DPAAAFLAQQESEIAGIEND 49
>UNIPROTKB|F5H6N3 [details] [associations]
symbol:CLTA "Clathrin light chain A" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0006886 GO:GO:0016192 GO:GO:0005198 GO:GO:0030130
GO:GO:0030132 PANTHER:PTHR10639 CTD:1211 KO:K04644 EMBL:AL158830
EMBL:AL161792 UniGene:Hs.522114 DNASU:1211 GeneID:1211
KEGG:hsa:1211 HGNC:HGNC:2090 ChiTaRS:CLTA GenomeRNAi:1211
NextBio:4985 IPI:IPI00977178 RefSeq:NP_001171691.1
Ensembl:ENST00000540080 UCSC:uc022bgp.1 ArrayExpress:F5H6N3
Bgee:F5H6N3 Uniprot:F5H6N3
Length = 166
Score = 191 (72.3 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
AE+ FV ++D+ PGTEWER+A+LCDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 112 AEEAFVNDIDESSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 164
Score = 64 (27.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 30 DPAAAFLAQQESEIAGIEND 49
>ZFIN|ZDB-GENE-040426-1986 [details] [associations]
symbol:clta "clathrin, light chain (Lca)"
species:7955 "Danio rerio" [GO:0030132 "clathrin coat of coated
pit" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR000996 Pfam:PF01086
PROSITE:PS00224 PROSITE:PS00581 ZFIN:ZDB-GENE-040426-1986
GO:GO:0006886 GO:GO:0016192 GO:GO:0005198 GO:GO:0030130
GO:GO:0030132 PANTHER:PTHR10639 eggNOG:NOG312397 CTD:1211
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 KO:K04644 OMA:ESNGPSD OrthoDB:EOG4TF0M2
EMBL:CT033816 EMBL:BC060939 IPI:IPI00513269 RefSeq:NP_998210.1
UniGene:Dr.31168 STRING:Q6P937 DNASU:406318
Ensembl:ENSDART00000067082 GeneID:406318 KEGG:dre:406318
InParanoid:Q6P937 NextBio:20817943 Uniprot:Q6P937
Length = 235
Score = 188 (71.2 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
AE+ V+E+D+ PGTEWER+A+LCDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 181 AEEAMVSELDENSPGTEWERVARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 233
Score = 66 (28.3 bits), Expect = 2.8e-20, Sum P(2) = 2.8e-20
Identities = 11/28 (39%), Positives = 22/28 (78%)
Query: 5 GDNFDDNVDPAAEFLAREQNQLAGLEDE 32
G+ + DPAA FLA++++++AG+E++
Sbjct: 15 GNGVGADEDPAAAFLAQQESEIAGIEND 42
>UNIPROTKB|P04975 [details] [associations]
symbol:CLTB "Clathrin light chain B" species:9913 "Bos
taurus" [GO:0030118 "clathrin coat" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0030132 "clathrin coat of
coated pit" evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi
network vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0030118 GO:GO:0030130 GO:GO:0030132 PANTHER:PTHR10639
eggNOG:NOG312397 GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 OrthoDB:EOG4TF0M2 EMBL:X04852 EMBL:X04853
IPI:IPI00710408 IPI:IPI00714905 PIR:C26599 RefSeq:NP_776702.1
UniGene:Bt.10 PDB:3LVG PDB:3LVH PDBsum:3LVG PDBsum:3LVH
MINT:MINT-1209554 STRING:P04975 PRIDE:P04975
Ensembl:ENSBTAT00000014218 Ensembl:ENSBTAT00000014220 GeneID:281698
KEGG:bta:281698 CTD:1212 InParanoid:P04975 KO:K04645
NextBio:20805622 Uniprot:P04975
Length = 228
Score = 179 (68.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 52 FLNAEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
++ +E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 171 YVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 228
Score = 64 (27.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>UNIPROTKB|F6X5M3 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0030130 GO:GO:0030132 PANTHER:PTHR10639
GeneTree:ENSGT00390000010441 CTD:1212 KO:K04645 OMA:VMEQEWR
Ensembl:ENSCAFT00000026430 GeneID:489104 KEGG:cfa:489104
EMBL:AAEX03002978 RefSeq:XP_546220.2 Uniprot:F6X5M3
Length = 229
Score = 179 (68.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 52 FLNAEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
++ +E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 172 YVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
Score = 64 (27.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>UNIPROTKB|P09497 [details] [associations]
symbol:CLTB "Clathrin light chain B" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0042277 "peptide binding"
evidence=IEA] [GO:0060170 "cilium membrane" evidence=IEA]
[GO:0030118 "clathrin coat" evidence=ISS;NAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006886 "intracellular protein
transport" evidence=NAS] Reactome:REACT_11123 InterPro:IPR000996
Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 GO:GO:0042277 GO:GO:0005802
GO:GO:0030118 Pathway_Interaction_DB:arf_3pathway GO:GO:0030130
GO:GO:0030132 GO:GO:0060170 EMBL:CH471195 PANTHER:PTHR10639
eggNOG:NOG312397 HOGENOM:HOG000008147 HOVERGEN:HBG003386
OrthoDB:EOG4TF0M2 CTD:1212 KO:K04645 EMBL:M20469 EMBL:M20470
EMBL:BT007028 EMBL:CR536577 EMBL:BC006332 EMBL:BC006457
IPI:IPI00014589 IPI:IPI00216472 PIR:B31775 RefSeq:NP_001825.1
RefSeq:NP_009028.1 UniGene:Hs.484241 ProteinModelPortal:P09497
IntAct:P09497 MINT:MINT-1390805 STRING:P09497 PhosphoSite:P09497
DMDM:116505 OGP:P09497 PaxDb:P09497 PRIDE:P09497 DNASU:1212
Ensembl:ENST00000310418 Ensembl:ENST00000345807 GeneID:1212
KEGG:hsa:1212 UCSC:uc003meh.3 UCSC:uc003mei.3 GeneCards:GC05M175819
HGNC:HGNC:2091 HPA:CAB003692 MIM:118970 neXtProt:NX_P09497
PharmGKB:PA26617 InParanoid:P09497 OMA:VMEQEWR PhylomeDB:P09497
ChiTaRS:CLTB GenomeRNAi:1212 NextBio:4993 PMAP-CutDB:P09497
ArrayExpress:P09497 Bgee:P09497 CleanEx:HS_CLTB
Genevestigator:P09497 GermOnline:ENSG00000175416 Uniprot:P09497
Length = 229
Score = 179 (68.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 52 FLNAEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
++ +E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 172 YVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
Score = 64 (27.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>MGI|MGI:1921575 [details] [associations]
symbol:Cltb "clathrin, light polypeptide (Lcb)"
species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030118 "clathrin
coat" evidence=ISO] [GO:0030130 "clathrin coat of trans-Golgi
network vesicle" evidence=IEA] [GO:0030132 "clathrin coat of coated
pit" evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0042277 "peptide binding" evidence=ISO] [GO:0060170 "cilium
membrane" evidence=IDA] InterPro:IPR000996 Pfam:PF01086
PROSITE:PS00224 PROSITE:PS00581 MGI:MGI:1921575 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 GO:GO:0042277 GO:GO:0005802
GO:GO:0030118 GO:GO:0030130 GO:GO:0030132 GO:GO:0060170
PANTHER:PTHR10639 eggNOG:NOG312397 GeneTree:ENSGT00390000010441
HOGENOM:HOG000008147 HOVERGEN:HBG003386 OrthoDB:EOG4TF0M2 CTD:1212
KO:K04645 OMA:VMEQEWR EMBL:AK009844 EMBL:AK029382 EMBL:AK045989
EMBL:BC070404 IPI:IPI00228978 IPI:IPI00554923 IPI:IPI00555094
RefSeq:NP_083146.1 UniGene:Mm.290026 ProteinModelPortal:Q6IRU5
IntAct:Q6IRU5 STRING:Q6IRU5 PhosphoSite:Q6IRU5
REPRODUCTION-2DPAGE:Q6IRU5 PaxDb:Q6IRU5 PRIDE:Q6IRU5
Ensembl:ENSMUST00000049575 Ensembl:ENSMUST00000091609 GeneID:74325
KEGG:mmu:74325 UCSC:uc007qon.1 UCSC:uc007qoo.1 InParanoid:Q6IRU5
NextBio:340453 Bgee:Q6IRU5 CleanEx:MM_CLTB Genevestigator:Q6IRU5
GermOnline:ENSMUSG00000047547 Uniprot:Q6IRU5
Length = 229
Score = 179 (68.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 52 FLNAEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
++ +E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 172 YVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
Score = 64 (27.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>RGD|621353 [details] [associations]
symbol:Cltb "clathrin, light chain B" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005326 "neurotransmitter transporter activity"
evidence=NAS] [GO:0005802 "trans-Golgi network" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006836
"neurotransmitter transport" evidence=NAS] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016183 "synaptic
vesicle coating" evidence=NAS] [GO:0030118 "clathrin coat"
evidence=IDA] [GO:0030125 "clathrin vesicle coat" evidence=NAS]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=NAS] [GO:0042277 "peptide binding" evidence=IDA]
[GO:0060170 "cilium membrane" evidence=IEA;ISO] InterPro:IPR000996
Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581 RGD:621353
GO:GO:0006886 GO:GO:0005198 GO:GO:0042277 GO:GO:0005802
GO:GO:0007269 GO:GO:0030130 GO:GO:0016183 GO:GO:0030132
GO:GO:0030125 GO:GO:0060170 PANTHER:PTHR10639 eggNOG:NOG312397
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 OrthoDB:EOG4TF0M2 CTD:1212 KO:K04645 OMA:VMEQEWR
EMBL:M15883 EMBL:M19262 IPI:IPI00207308 IPI:IPI00230927 PIR:B25994
RefSeq:NP_446287.1 UniGene:Rn.3440 STRING:P08082 PhosphoSite:P08082
PRIDE:P08082 Ensembl:ENSRNOT00000023651 Ensembl:ENSRNOT00000032402
GeneID:116561 KEGG:rno:116561 UCSC:RGD:621353 InParanoid:P08082
NextBio:619229 Genevestigator:P08082 GermOnline:ENSRNOG00000017506
GO:GO:0005326 Uniprot:P08082
Length = 229
Score = 179 (68.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 52 FLNAEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
++ +E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 172 YVASEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 229
Score = 64 (27.6 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>UNIPROTKB|E1C6S9 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0006886 GO:GO:0016192 GO:GO:0005198 GO:GO:0030130
GO:GO:0030132 PANTHER:PTHR10639 GeneTree:ENSGT00390000010441
EMBL:AADN02028710 IPI:IPI00582897 PRIDE:E1C6S9
Ensembl:ENSGALT00000005292 Uniprot:E1C6S9
Length = 210
Score = 177 (67.4 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 30/55 (54%), Positives = 44/55 (80%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
+E+ F+ E + PG+EWE++A+LCDFNPK + +KDVSRMRS+++ LKQTPL +
Sbjct: 156 SEEAFLKESKEETPGSEWEKVAQLCDFNPKSSKQSKDVSRMRSVLISLKQTPLSR 210
Score = 64 (27.6 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 19 DPAAAFLAQQESEIAGIEND 38
>UNIPROTKB|G3N252 [details] [associations]
symbol:CLTB "Clathrin light chain B" species:9913 "Bos
taurus" [GO:0060170 "cilium membrane" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0030132 "clathrin coat of
coated pit" evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi
network vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0005802 GO:GO:0030130 GO:GO:0030132 GO:GO:0060170
PANTHER:PTHR10639 GeneTree:ENSGT00390000010441 OMA:VMEQEWR
EMBL:DAAA02020033 Ensembl:ENSBTAT00000064630 Uniprot:G3N252
Length = 242
Score = 177 (67.4 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
+E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 188 SEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 242
Score = 64 (27.6 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>UNIPROTKB|E2R2G2 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060170 "cilium membrane" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030132
"clathrin coat of coated pit" evidence=IEA] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR000996
Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581 GO:GO:0006886
GO:GO:0016192 GO:GO:0005198 GO:GO:0005802 GO:GO:0030130
GO:GO:0030132 GO:GO:0060170 PANTHER:PTHR10639 CTD:1212 KO:K04645
RefSeq:XP_866115.1 Ensembl:ENSCAFT00000026430 GeneID:489104
KEGG:cfa:489104 NextBio:20862325 Uniprot:E2R2G2
Length = 211
Score = 177 (67.4 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPLKK 109
+E+ FV E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LKQTPL +
Sbjct: 157 SEEAFVKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLKQTPLSR 211
Score = 64 (27.6 bits), Expect = 6.4e-19, Sum P(2) = 6.4e-19
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 22 DPAAAFLAQQESEIAGIEND 41
>UNIPROTKB|F1NUW5 [details] [associations]
symbol:CLTB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0060170 "cilium membrane"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0005802 GO:GO:0030130 GO:GO:0030132 GO:GO:0060170
PANTHER:PTHR10639 GeneTree:ENSGT00390000010441 EMBL:AADN02028710
IPI:IPI00818992 Ensembl:ENSGALT00000005291 OMA:EWERVSK
Uniprot:F1NUW5
Length = 255
Score = 175 (66.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 55 AEKQFVAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
+E+ F+ E + PG+EWE++A+LCDFNPK + +KDVSRMRS+++ LKQTPL
Sbjct: 156 SEEAFLKESKEETPGSEWEKVAQLCDFNPKSSKQSKDVSRMRSVLISLKQTPL 208
Score = 64 (27.6 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
Identities = 10/20 (50%), Positives = 19/20 (95%)
Query: 13 DPAAEFLAREQNQLAGLEDE 32
DPAA FLA++++++AG+E++
Sbjct: 19 DPAAAFLAQQESEIAGIEND 38
>MGI|MGI:894297 [details] [associations]
symbol:Clta "clathrin, light polypeptide (Lca)" species:10090
"Mus musculus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005905 "coated pit" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded
vesicle" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030118 "clathrin coat" evidence=ISO] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0042277 "peptide binding" evidence=ISO]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
MGI:MGI:894297 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0016023 GO:GO:0030130 GO:GO:0030132 EMBL:AL732563
PANTHER:PTHR10639 eggNOG:NOG312397 HOGENOM:HOG000008147
HOVERGEN:HBG003386 ChiTaRS:CLTA EMBL:U91848 IPI:IPI00114409
IPI:IPI00876257 UniGene:Mm.298875 IntAct:O08585 STRING:O08585
PhosphoSite:O08585 PaxDb:O08585 PRIDE:O08585 UCSC:uc008sri.1
CleanEx:MM_CLTA Genevestigator:O08585 GermOnline:ENSMUSG00000028478
Uniprot:O08585
Length = 235
Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
Identities = 42/92 (45%), Positives = 59/92 (64%)
Query: 17 EFLAREQNQLAGLEDELQPAVAVNATINGMTNSLL-FLNAEKQFVAEVDDIEPGTEWERI 75
E+ AR+ QL + + VA A L+ ++ AE+ FV ++D+ PGTEWER+
Sbjct: 144 EWYARQDEQLQ--KTKANNRVADEAFYKQPFADLIGYVAAEEAFVNDIDESSPGTEWERV 201
Query: 76 AKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
A+LCDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 202 ARLCDFNPKSSKQAKDVSRMRSVLISLKQAPL 233
>UNIPROTKB|E2RPI9 [details] [associations]
symbol:CLTA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0030130 GO:GO:0030132 PANTHER:PTHR10639
GeneTree:ENSGT00390000010441 KO:K04644 OMA:ESNGPSD
EMBL:AAEX03007962 GeneID:100856559 KEGG:cfa:100856559
NextBio:20850719 RefSeq:XP_003639442.1 Ensembl:ENSCAFT00000003597
Uniprot:E2RPI9
Length = 248
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 21 REQNQLAGLEDELQPAVAVNATINGMTNSLLFLN--AEKQFVAEVDDIEPGTEWERIAKL 78
+ N++A QP V + + + L AE+ FV ++D+ PGTEWER+A+L
Sbjct: 158 KANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARL 217
Query: 79 CDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
CDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 218 CDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>UNIPROTKB|C9J8P9 [details] [associations]
symbol:CLTA "Clathrin light chain A" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0006886 GO:GO:0016192 GO:GO:0005198 GO:GO:0030130
GO:GO:0030132 PANTHER:PTHR10639 HOGENOM:HOG000008147 EMBL:AL158830
EMBL:AL161792 HGNC:HGNC:2090 ChiTaRS:CLTA IPI:IPI00946844
ProteinModelPortal:C9J8P9 STRING:C9J8P9 Ensembl:ENST00000466396
ArrayExpress:C9J8P9 Bgee:C9J8P9 Uniprot:C9J8P9
Length = 196
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 21 REQNQLAGLEDELQPAVAVNATINGMTNSLLFLN--AEKQFVAEVDDIEPGTEWERIAKL 78
+ N++A QP V + + + L AE+ FV ++D+ PGTEWER+A+L
Sbjct: 106 KANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARL 165
Query: 79 CDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
CDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 166 CDFNPKSSKQAKDVSRMRSVLISLKQAPL 194
>UNIPROTKB|P09496 [details] [associations]
symbol:CLTA "Clathrin light chain A" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0042277
"peptide binding" evidence=IEA] [GO:0030118 "clathrin coat"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0042059 "negative regulation of epidermal growth factor
receptor signaling pathway" evidence=TAS] [GO:0048011 "neurotrophin
TRK receptor signaling pathway" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0006892 "post-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007411 "axon guidance" evidence=TAS] [GO:0016044
"cellular membrane organization" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0030669 "clathrin-coated endocytic
vesicle membrane" evidence=TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=ISS] Reactome:REACT_11123
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0030669 GO:GO:0032588 GO:GO:0019886 GO:GO:0005198
GO:GO:0006897 GO:GO:0042277 EMBL:CH471071 GO:GO:0030118
GO:GO:0016044 GO:GO:0006892 Pathway_Interaction_DB:arf_3pathway
GO:GO:0030130 GO:GO:0042059 GO:GO:0030132 PANTHER:PTHR10639
eggNOG:NOG312397 CTD:1211 HOGENOM:HOG000008147 HOVERGEN:HBG003386
KO:K04644 OMA:ESNGPSD EMBL:M20471 EMBL:M20472 EMBL:DQ270158
EMBL:BT007170 EMBL:AK291078 EMBL:AK295692 EMBL:AL158830
EMBL:AL161792 EMBL:BC009201 EMBL:BC019287 IPI:IPI00014587
IPI:IPI00216393 IPI:IPI00790571 IPI:IPI00945731 PIR:A31775
RefSeq:NP_001070145.1 RefSeq:NP_001171689.1 RefSeq:NP_001824.1
RefSeq:NP_009027.1 UniGene:Hs.522114 ProteinModelPortal:P09496
IntAct:P09496 STRING:P09496 PhosphoSite:P09496 DMDM:116501
OGP:P09496 PaxDb:P09496 PRIDE:P09496 DNASU:1211
Ensembl:ENST00000242285 Ensembl:ENST00000345519
Ensembl:ENST00000396603 Ensembl:ENST00000433436
Ensembl:ENST00000470744 Ensembl:ENST00000538225 GeneID:1211
KEGG:hsa:1211 UCSC:uc003zzc.3 UCSC:uc003zzd.3 UCSC:uc003zze.3
GeneCards:GC09P036180 HGNC:HGNC:2090 HPA:CAB002665 MIM:118960
neXtProt:NX_P09496 PharmGKB:PA26616 InParanoid:P09496
OrthoDB:EOG4TF0M2 PhylomeDB:P09496 ChiTaRS:CLTA GenomeRNAi:1211
NextBio:4985 PMAP-CutDB:P09496 ArrayExpress:P09496 Bgee:P09496
CleanEx:HS_CLTA Genevestigator:P09496 GermOnline:ENSG00000122705
Uniprot:P09496
Length = 248
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 21 REQNQLAGLEDELQPAVAVNATINGMTNSLLFLN--AEKQFVAEVDDIEPGTEWERIAKL 78
+ N++A QP V + + + L AE+ FV ++D+ PGTEWER+A+L
Sbjct: 158 KANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARL 217
Query: 79 CDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
CDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 218 CDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>RGD|70919 [details] [associations]
symbol:Clta "clathrin, light chain A" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005905 "coated pit" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEP] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=ISO] [GO:0030118 "clathrin coat" evidence=IDA] [GO:0030125
"clathrin vesicle coat" evidence=NAS] [GO:0030130 "clathrin coat of
trans-Golgi network vesicle" evidence=IEA] [GO:0030132 "clathrin
coat of coated pit" evidence=NAS] [GO:0030136 "clathrin-coated
vesicle" evidence=IDA] [GO:0030669 "clathrin-coated endocytic
vesicle membrane" evidence=TAS] [GO:0042277 "peptide binding"
evidence=IDA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 EMBL:M19261 RGD:70919 Reactome:REACT_111984
GO:GO:0006886 GO:GO:0030669 GO:GO:0005198 GO:GO:0006897
GO:GO:0042277 GO:GO:0030130 GO:GO:0030132 GO:GO:0030125
PANTHER:PTHR10639 eggNOG:NOG312397 CTD:1211
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147 HOVERGEN:HBG003386
KO:K04644 OMA:ESNGPSD EMBL:M15882 EMBL:M19260 IPI:IPI00207305
IPI:IPI00230870 PIR:A25994 RefSeq:NP_114180.1 UniGene:Rn.112599
IntAct:P08081 MINT:MINT-4996128 STRING:P08081 PRIDE:P08081
Ensembl:ENSRNOT00000019737 Ensembl:ENSRNOT00000036361
Ensembl:ENSRNOT00000036366 GeneID:83800 KEGG:rno:83800
UCSC:RGD:70919 InParanoid:P08081 NextBio:616385 ArrayExpress:P08081
Genevestigator:P08081 GermOnline:ENSRNOG00000014635 Uniprot:P08081
Length = 248
Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 21 REQNQLAGLEDELQPAVAVNATINGMTNSLLFLN--AEKQFVAEVDDIEPGTEWERIAKL 78
+ N++A QP V + + + L AE+ FV ++D+ PGTEWER+A+L
Sbjct: 158 KASNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIDESSPGTEWERVARL 217
Query: 79 CDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
CDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 218 CDFNPKSSKQAKDVSRMRSVLISLKQAPL 246
>UNIPROTKB|P04973 [details] [associations]
symbol:CLTA "Clathrin light chain A" species:9913 "Bos
taurus" [GO:0030132 "clathrin coat of coated pit" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
GO:GO:0030130 GO:GO:0030132 PANTHER:PTHR10639 eggNOG:NOG312397
EMBL:X04849 EMBL:X04851 EMBL:BC118427 IPI:IPI00695192
IPI:IPI00705831 IPI:IPI00838590 PIR:A26599 RefSeq:NP_776447.1
UniGene:Bt.1617 PDB:1XI4 PDB:3IYV PDBsum:1XI4 PDBsum:3IYV
MINT:MINT-1209505 STRING:P04973 PRIDE:P04973
Ensembl:ENSBTAT00000001518 Ensembl:ENSBTAT00000046425
Ensembl:ENSBTAT00000055956 GeneID:281078 KEGG:bta:281078 CTD:1211
GeneTree:ENSGT00390000010441 HOGENOM:HOG000008147
HOVERGEN:HBG003386 InParanoid:P04973 KO:K04644 OMA:ESNGPSD
EvolutionaryTrace:P04973 NextBio:20805157 Uniprot:P04973
Length = 243
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 21 REQNQLAGLEDELQPAVAVNATINGMTNSLLFLN--AEKQFVAEVDDIEPGTEWERIAKL 78
+ N++A QP V + + + L AE+ FV ++++ PGTEWER+A+L
Sbjct: 153 KANNRVADEAFYKQPFADVIGYVTNINHPCYSLEQAAEEAFVNDIEESSPGTEWERVARL 212
Query: 79 CDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
CDFNPK + KDVSRMRS+++ LKQ PL
Sbjct: 213 CDFNPKSSKQAKDVSRMRSVLISLKQAPL 241
>UNIPROTKB|D6RJD1 [details] [associations]
symbol:CLTB "Clathrin light chain B" species:9606 "Homo
sapiens" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=IEA]
[GO:0030132 "clathrin coat of coated pit" evidence=IEA]
InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224 PROSITE:PS00581
GO:GO:0006886 GO:GO:0016192 GO:GO:0005198 GO:GO:0030130
GO:GO:0030132 PANTHER:PTHR10639 HOGENOM:HOG000008147 HGNC:HGNC:2091
ChiTaRS:CLTB EMBL:AC138956 IPI:IPI00965502 Ensembl:ENST00000502877
ArrayExpress:D6RJD1 Bgee:D6RJD1 Uniprot:D6RJD1
Length = 125
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 42/104 (40%), Positives = 62/104 (59%)
Query: 13 DPAAEFLAREQNQLAGLE-DE------------LQPAVAVNATINGMTNSLLFLNAEKQF 59
DPAA FLA++++++AG+E DE QP A M ++ ++ F
Sbjct: 22 DPAAAFLAQQESEIAGIENDEGFGAPAGSHAAPAQPGPTSGAGSEDMGTTVNGDVFQEAF 81
Query: 60 VAEVDDIEPGTEWERIAKLCDFNPKVGRTNKDVSRMRSIILQLK 103
V E + PGTEWE++A+LCDFNPK + KDVSR+RS+++ LK
Sbjct: 82 VKESKEETPGTEWEKVAQLCDFNPKSSKQCKDVSRLRSVLMSLK 125
>ASPGD|ASPL0000043860 [details] [associations]
symbol:AN2050 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] InterPro:IPR000996
Pfam:PF01086 GO:GO:0006886 GO:GO:0016192 GO:GO:0005198
EMBL:BN001307 EMBL:AACD01000032 GO:GO:0030130 GO:GO:0030132
PANTHER:PTHR10639 HOGENOM:HOG000190326 OMA:GTSWERI
OrthoDB:EOG4HX895 eggNOG:NOG247223 RefSeq:XP_659654.1 STRING:Q5BBN0
EnsemblFungi:CADANIAT00008719 GeneID:2875472 KEGG:ani:AN2050.2
Uniprot:Q5BBN0
Length = 240
Score = 83 (34.3 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 21/52 (40%), Positives = 29/52 (55%)
Query: 57 KQFVAEVDDIEPG-TEWERIAKLCDFNPKV---GRTNKDVSRMRSIILQLKQ 104
+QF+A +D G T WERIAKL D + K G + R R ++L LK+
Sbjct: 179 EQFLANREDTSSGGTSWERIAKLVDVSGKGTRGGASGSGKERFRELLLSLKK 230
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 17 EFLAREQNQLAGLEDELQPAVAVNATINGMTNSLLFLNAEK 57
+FLARE+ L G +D Q A A + T + N L E+
Sbjct: 28 DFLARER-ALLG-DDADQFATAQDVTSTDVNNDELLGGPEE 66
>DICTYBASE|DDB_G0277403 [details] [associations]
symbol:clc "clathrin light chain" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006907
"pinocytosis" evidence=IMP] [GO:0048268 "clathrin coat assembly"
evidence=IMP] [GO:0031154 "culmination involved in sorocarp
development" evidence=IMP] [GO:0030125 "clathrin vesicle coat"
evidence=IDA] [GO:0009992 "cellular water homeostasis"
evidence=IMP] [GO:0006897 "endocytosis" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=IEA;ISS] [GO:0006869
"lipid transport" evidence=ISS] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=ISS] [GO:0030132 "clathrin coat of coated pit"
evidence=IEA] [GO:0030130 "clathrin coat of trans-Golgi network
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR000996 Pfam:PF01086 PROSITE:PS00224
PROSITE:PS00581 dictyBase:DDB_G0277403 GO:GO:0006898 GO:GO:0006886
GO:GO:0006869 GO:GO:0005198 GenomeReviews:CM000151_GR GO:GO:0000910
EMBL:AAFI02000020 GO:GO:0031154 GO:GO:0009992 GO:GO:0048268
GO:GO:0030130 GO:GO:0030132 GO:GO:0030125 PANTHER:PTHR10639
EMBL:AY394008 RefSeq:XP_642650.1 EnsemblProtists:DDB0191305
GeneID:8621066 KEGG:ddi:DDB_G0277403 eggNOG:NOG247223 OMA:NFYSERE
Uniprot:Q8MN58
Length = 194
Score = 88 (36.0 bits), Expect = 0.00077, P = 0.00077
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 62 EVDDIEPGTE--WERIAKLCDFNPKVGRTNKDVSRMRSIILQLKQTPL 107
E D T WE + + D K NKD SRMR I+++LK P+
Sbjct: 146 ETDSTSGNTTHTWESVVSMIDLQAKPNPANKDTSRMREILIRLKNQPI 193
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.133 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 110 110 0.00091 102 3 11 22 0.48 30
29 0.42 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 547 (58 KB)
Total size of DFA: 115 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 12.73u 0.08s 12.81t Elapsed: 00:00:27
Total cpu time: 12.73u 0.08s 12.81t Elapsed: 00:00:30
Start: Thu Aug 15 10:58:05 2013 End: Thu Aug 15 10:58:35 2013