Your job contains 1 sequence.
>psy5570
MYLGIHPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARAPG
FPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADV
AVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASSRS
IHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRERKKK
TGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSS
VSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTN
SKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTS
FNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQCAESFYDRMTECVYSSPLTSFNHGIKPD
PWFYVDVMGKGKVALQEVNQKLGQIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYT
DIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSY
ELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQYQPVRDD
IVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLV
FPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSV
STQARQPYIKSRVRCPPLKKEKSGVNITRLSITLNFSTSDTLSWLLDSNTNVTVSALSWA
FMVNVSSFPAHFMILVILRKKREHDLDTLQGHLYF
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5570
(875 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F5GWT9 - symbol:PFAS "Phosphoribosylformylglyci... 385 3.7e-73 3
RGD|1304926 - symbol:Pfas "phosphoribosylformylglycinamid... 385 7.7e-73 3
UNIPROTKB|O15067 - symbol:PFAS "Phosphoribosylformylglyci... 385 3.3e-72 3
MGI|MGI:2684864 - symbol:Pfas "phosphoribosylformylglycin... 387 4.0e-72 3
UNIPROTKB|E2QYQ9 - symbol:PFAS "Uncharacterized protein" ... 382 7.2e-72 3
ZFIN|ZDB-GENE-030131-4420 - symbol:pfas "phosphoribosylfo... 381 3.6e-71 3
UNIPROTKB|I3L712 - symbol:PFAS "Uncharacterized protein" ... 379 4.5e-70 3
UNIPROTKB|F1N4K1 - symbol:PFAS "Uncharacterized protein" ... 377 1.1e-68 3
TAIR|locus:2019637 - symbol:PUR4 "purine biosynthesis 4" ... 375 3.5e-64 3
FB|FBgn0000052 - symbol:ade2 "adenosine 2" species:7227 "... 331 6.4e-63 3
DICTYBASE|DDB_G0288145 - symbol:purL "PFAS" species:44689... 379 2.6e-58 2
WB|WBGene00008654 - symbol:F10F2.2 species:6239 "Caenorha... 360 6.1e-58 2
SGD|S000003293 - symbol:ADE6 "Formylglycinamidine-ribonuc... 308 8.8e-42 3
ASPGD|ASPL0000009625 - symbol:AN8121 species:162425 "Emer... 298 6.1e-37 2
CGD|CAL0001264 - symbol:ADE6 species:5476 "Candida albica... 277 6.4e-34 2
UNIPROTKB|Q9KTN2 - symbol:purL "Phosphoribosylformylglyci... 272 9.2e-34 2
TIGR_CMR|VC_0869 - symbol:VC_0869 "phosphoribosylformylgl... 272 9.2e-34 2
TIGR_CMR|CPS_3675 - symbol:CPS_3675 "phosphoribosylformyl... 288 2.2e-33 2
TIGR_CMR|CBU_0631 - symbol:CBU_0631 "phosphoribosylformyl... 261 3.0e-33 3
TIGR_CMR|SO_3287 - symbol:SO_3287 "phosphoribosylformylgl... 270 3.9e-33 3
POMBASE|SPAC6F12.10c - symbol:ade3 "phosphoribosylformylg... 255 6.1e-33 2
UNIPROTKB|P15254 - symbol:purL species:83333 "Escherichia... 244 7.7e-33 4
UNIPROTKB|G4NB68 - symbol:MGG_11541 "Phosphoribosylformyl... 247 2.1e-29 3
ZFIN|ZDB-GENE-040426-59 - symbol:tyms "thymidylate syntha... 228 7.6e-17 1
FB|FBgn0024920 - symbol:Ts "Ts" species:7227 "Drosophila ... 224 3.9e-16 1
UNIPROTKB|F1N8Y2 - symbol:TYMS "Thymidylate synthase" spe... 222 4.1e-16 1
UNIPROTKB|I3LB48 - symbol:TYMS "Thymidylate synthase" spe... 212 4.4e-16 1
UNIPROTKB|F1PNM3 - symbol:TYMS "Thymidylate synthase" spe... 211 5.6e-16 1
MGI|MGI:98878 - symbol:Tyms "thymidylate synthase" specie... 216 2.3e-15 1
RGD|3921 - symbol:Tyms "thymidylate synthetase" species:1... 216 2.3e-15 1
FB|FBgn0032987 - symbol:RpL21 "Ribosomal protein L21" spe... 205 2.4e-15 1
UNIPROTKB|Q8WYK3 - symbol:TS "Thymidylate synthetase, iso... 205 2.4e-15 1
UNIPROTKB|Q8WYK4 - symbol:TS "Thymidylate synthase" speci... 205 2.4e-15 1
UNIPROTKB|F1PU23 - symbol:TYMS "Uncharacterized protein" ... 211 6.2e-15 2
UNIPROTKB|F1PNL9 - symbol:TYMS "Uncharacterized protein" ... 211 3.7e-14 2
UNIPROTKB|F1MY63 - symbol:TYMS "Thymidylate synthase" spe... 208 8.4e-14 1
UNIPROTKB|Q2TA32 - symbol:TYMS "Thymidylate synthase" spe... 208 8.4e-14 1
UNIPROTKB|P04818 - symbol:TYMS "Thymidylate synthase" spe... 205 8.6e-14 1
TAIR|locus:2042649 - symbol:THY-1 "thymidylate synthase 1... 209 2.1e-13 1
TIGR_CMR|BA_2236 - symbol:BA_2236 "thymidylate synthase" ... 201 2.9e-13 1
UNIPROTKB|D0UZU4 - symbol:ORF75 "ORF75 protein" species:3... 118 3.4e-13 3
RGD|2320757 - symbol:LOC100361103 "ribosomal protein L21-... 183 5.5e-13 1
TAIR|locus:2139544 - symbol:THY-2 "thymidylate synthase 2... 205 7.0e-13 1
RGD|1562601 - symbol:RGD1562601 "similar to ribosomal pro... 182 7.1e-13 1
RGD|1583496 - symbol:LOC681195 "similar to ribosomal prot... 181 9.0e-13 1
RGD|2324079 - symbol:LOC100362779 "ribosomal protein L21-... 181 9.0e-13 1
MGI|MGI:1278340 - symbol:Rpl21 "ribosomal protein L21" sp... 180 1.2e-12 1
RGD|2321753 - symbol:LOC100360604 "ribosomal protein L21-... 180 1.2e-12 1
RGD|68390 - symbol:Rpl21 "ribosomal protein L21" species:... 180 1.2e-12 1
UNIPROTKB|Q6PDW2 - symbol:LOC100360604 "RCG42727, isoform... 180 1.2e-12 1
UNIPROTKB|J9NSP4 - symbol:J9NSP4 "Uncharacterized protein... 180 1.2e-12 1
RGD|1562469 - symbol:RGD1562469 "similar to ribosomal pro... 180 1.2e-12 1
UNIPROTKB|P46778 - symbol:RPL21 "60S ribosomal protein L2... 179 1.5e-12 1
UNIPROTKB|F1RTJ9 - symbol:RPL21 "60S ribosomal protein L2... 179 1.5e-12 1
UNIPROTKB|F1NP85 - symbol:RPL21 "Uncharacterized protein"... 179 1.5e-12 1
UNIPROTKB|F1PWM2 - symbol:RPL21 "Uncharacterized protein"... 179 1.5e-12 1
UNIPROTKB|J9P4T5 - symbol:LOC100855701 "Uncharacterized p... 178 1.9e-12 1
RGD|1586616 - symbol:LOC686080 "similar to ribosomal prot... 178 1.9e-12 1
RGD|1597962 - symbol:LOC682512 "similar to ribosomal prot... 178 1.9e-12 1
UNIPROTKB|Q861S4 - symbol:RPL21 "Similar to ribosomal pro... 178 1.9e-12 1
UNIPROTKB|J9NVK8 - symbol:J9NVK8 "Uncharacterized protein... 178 1.9e-12 1
UNIPROTKB|Q0C504 - symbol:thyA "Thymidylate synthase" spe... 187 2.1e-12 1
RGD|1562839 - symbol:RGD1562839 "similar to ribosomal pro... 177 2.4e-12 1
ZFIN|ZDB-GENE-030131-8512 - symbol:rpl21 "ribosomal prote... 177 2.4e-12 1
RGD|1560414 - symbol:RGD1560414 "similar to ribosomal pro... 177 2.4e-12 1
UNIPROTKB|J9NXT7 - symbol:LOC478864 "Uncharacterized prot... 177 2.4e-12 1
RGD|1562923 - symbol:RGD1562923 "similar to ribosomal pro... 177 2.4e-12 1
RGD|2321582 - symbol:LOC100364176 "ribosomal protein L21-... 177 2.4e-12 1
UNIPROTKB|F1N7U3 - symbol:Bt.86815 "Uncharacterized prote... 177 2.4e-12 1
UNIPROTKB|G3V1B3 - symbol:RPL21 "Ribosomal protein L21, i... 177 2.4e-12 1
WB|WBGene00004433 - symbol:rpl-21 species:6239 "Caenorhab... 177 2.4e-12 1
UNIPROTKB|P49666 - symbol:RPL21 "60S ribosomal protein L2... 177 2.4e-12 1
RGD|1562971 - symbol:RGD1562971 "similar to ribosomal pro... 175 3.9e-12 1
RGD|1561815 - symbol:RGD1561815 "similar to ribosomal pro... 175 3.9e-12 1
RGD|1564634 - symbol:RGD1564634 "similar to ribosomal pro... 162 4.9e-12 2
RGD|1565370 - symbol:RGD1565370 "similar to ribosomal pro... 174 5.1e-12 1
RGD|2320219 - symbol:LOC100364846 "ribosomal protein L21-... 174 5.1e-12 1
RGD|1565159 - symbol:RGD1565159 "similar to ribosomal pro... 174 5.1e-12 1
RGD|1564552 - symbol:RGD1564552 "similar to ribosomal pro... 173 6.5e-12 1
UNIPROTKB|G5E6D6 - symbol:G5E6D6 "Uncharacterized protein... 173 6.5e-12 1
RGD|1561957 - symbol:RGD1561957 "similar to ribosomal pro... 173 6.5e-12 1
RGD|1589437 - symbol:LOC680639 "similar to ribosomal prot... 173 6.5e-12 1
RGD|1562929 - symbol:RGD1562929 "similar to ribosomal pro... 172 8.3e-12 1
RGD|1561875 - symbol:RGD1561875 "similar to ribosomal pro... 172 8.3e-12 1
RGD|1566270 - symbol:RGD1566270 "similar to ribosomal pro... 172 8.3e-12 1
UNIPROTKB|J9NZU6 - symbol:J9NZU6 "Uncharacterized protein... 171 1.1e-11 1
RGD|2322974 - symbol:LOC100363471 "ribosomal protein L21-... 170 1.4e-11 1
RGD|2321746 - symbol:LOC100360611 "ribosomal protein L21-... 170 1.4e-11 1
UNIPROTKB|F1MUN0 - symbol:F1MUN0 "Uncharacterized protein... 170 1.4e-11 1
RGD|1559531 - symbol:RGD1559531 "similar to 60S ribosomal... 169 1.7e-11 1
UNIPROTKB|F1LWH4 - symbol:F1LWH4 "Uncharacterized protein... 169 1.7e-11 1
WB|WBGene00022455 - symbol:Y110A7A.4 species:6239 "Caenor... 185 2.1e-11 1
UNIPROTKB|P67044 - symbol:thyA "Thymidylate synthase" spe... 180 2.2e-11 1
RGD|1566326 - symbol:RGD1566326 "similar to ribosomal pro... 168 2.2e-11 1
UNIPROTKB|J9NYS9 - symbol:J9NYS9 "Uncharacterized protein... 167 2.8e-11 1
RGD|2318391 - symbol:LOC100365794 "ribosomal protein L21-... 166 3.6e-11 1
UNIPROTKB|D4A4U4 - symbol:D4A4U4 "Uncharacterized protein... 165 4.6e-11 1
UNIPROTKB|F1PL86 - symbol:F1PL86 "Uncharacterized protein... 165 4.6e-11 1
TAIR|locus:2012275 - symbol:AT1G09590 species:3702 "Arabi... 164 5.9e-11 1
TAIR|locus:2024387 - symbol:AT1G09690 species:3702 "Arabi... 164 5.9e-11 1
WARNING: Descriptions of 48 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F5GWT9 [details] [associations]
symbol:PFAS "Phosphoribosylformylglycinamidine synthase"
species:9606 "Homo sapiens" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=IEA]
[GO:0006189 "'de novo' IMP biosynthetic process" evidence=IEA]
[GO:0006541 "glutamine metabolic process" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] InterPro:IPR010073
InterPro:IPR016188 EMBL:AC135178 GO:GO:0006189 InterPro:IPR017926
PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 GO:GO:0004642 TIGRFAMs:TIGR01735 HGNC:HGNC:8863
ChiTaRS:PFAS IPI:IPI01012022 ProteinModelPortal:F5GWT9 SMR:F5GWT9
Ensembl:ENST00000545834 ArrayExpress:F5GWT9 Bgee:F5GWT9
Uniprot:F5GWT9
Length = 914
Score = 385 (140.6 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
Identities = 79/120 (65%), Positives = 93/120 (77%)
Query: 53 FTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGP 112
F L R P PP +SV QAL V+RL +V SKR+LTNKVDR V GL+AQQQCVGP
Sbjct: 217 FFLQRKPPMLQPLALPPGLSVHQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGP 276
Query: 113 LHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
L TPLADVAVVAL H +L GAAT++GEQP+K L+DPK AR+AVAEALTNLVFA ++DL+
Sbjct: 277 LQTPLADVAVVALSHEELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLR 336
Score = 352 (129.0 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
Identities = 70/132 (53%), Positives = 85/132 (64%)
Query: 647 RIGPKYQYQPVRDDI-VGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQD 705
R+GP Y P V G +A+LREEG NGDREM+ + GFEVWD+T+QD
Sbjct: 614 RMGPSYCLPPTFPKASVPREPGGPSPRVAILREEGSNGDREMADAFHLAGFEVWDVTMQD 673
Query: 706 LLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGV 765
L I LD F+G+ F GGFSYAD LGSAKGWAA++ + +L +F R DTFS GV
Sbjct: 674 LCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFHPRAGAELRRFRKRPDTFSLGV 733
Query: 766 CNGCQLMNLLGW 777
CNGCQL+ LLGW
Sbjct: 734 CNGCQLLALLGW 745
Score = 135 (52.6 bits), Expect = 3.7e-73, Sum P(3) = 3.7e-73
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 547 LKR-NPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKL 605
LKR + C +L + E H ++SV N VL E +G L +WE TS++L++L
Sbjct: 541 LKRYRDAGLHCLELGHTG-EAGPHAMVRVSV--NGAVVLEEPVGELRALWEETSFQLDRL 597
Query: 606 QMNARCADEEYNSLVTRIGPKYQYQP 631
Q RC EE L R+GP Y P
Sbjct: 598 QAEPRCVAEEERGLRERMGPSYCLPP 623
Score = 96 (38.9 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + ++ P+ + DD+ TE YP+NPNGSPG
Sbjct: 812 GYVAFSSPELQAQIEARGLAPLHWADDDGNPTEQYPLNPNGSPG 855
Score = 49 (22.3 bits), Expect = 5.5e-32, Sum P(2) = 5.5e-32
Identities = 19/67 (28%), Positives = 25/67 (37%)
Query: 215 DDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNV-T 273
D N E P + PG R +GRY ++ V G P G G V V +
Sbjct: 749 DPNEDAAEMGPDSQPARPGLLLRHNLSGRYESRWASVRVGPG-PALMLRGMEGAVLPVWS 807
Query: 274 QHAVGVI 280
H G +
Sbjct: 808 AHGEGYV 814
>RGD|1304926 [details] [associations]
symbol:Pfas "phosphoribosylformylglycinamidine synthase"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=IEA;ISO] [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=IEA] [GO:0006541 "glutamine
metabolic process" evidence=IDA] [GO:0009156 "ribonucleoside
monophosphate biosynthetic process" evidence=IDA] [GO:0042493
"response to drug" evidence=IEP] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586 RGD:1304926
GO:GO:0042493 GO:GO:0006189 GO:GO:0006541 InterPro:IPR017926
PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 GO:GO:0009156 GO:GO:0004642 TIGRFAMs:TIGR01735
GeneTree:ENSGT00390000007600 OrthoDB:EOG4WDD9X IPI:IPI00369646
ProteinModelPortal:D4AB17 PRIDE:D4AB17 Ensembl:ENSRNOT00000007087
UCSC:RGD:1304926 Uniprot:D4AB17
Length = 1271
Score = 385 (140.6 bits), Expect = 7.7e-73, Sum P(3) = 7.7e-73
Identities = 80/125 (64%), Positives = 97/125 (77%)
Query: 49 IPQV-FTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQ 107
+PQ F L R P PP++SV QAL V+RL +V SKR+LTNKVDR V GL+AQQ
Sbjct: 564 MPQKEFFLQRKPPVLQPLALPPDLSVGQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQ 623
Query: 108 QCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAK 167
QCVGPL TPLADVAVVAL H +L GAAT++GEQP+K L+DPK AR+AV+EALTNLVFA
Sbjct: 624 QCVGPLQTPLADVAVVALSHQELVGAATALGEQPVKSLLDPKAAARLAVSEALTNLVFAL 683
Query: 168 ISDLK 172
++DL+
Sbjct: 684 VTDLR 688
Score = 367 (134.2 bits), Expect = 7.7e-73, Sum P(3) = 7.7e-73
Identities = 71/132 (53%), Positives = 87/132 (65%)
Query: 647 RIGPKYQYQPVRDDI-VGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQD 705
RIGP Y P V G + +A+LREEG NGDREM+ + GFEVWD+T+QD
Sbjct: 971 RIGPSYCLPPTFPVASVPCKPGGPIPRVAILREEGSNGDREMADAFHLAGFEVWDVTMQD 1030
Query: 706 LLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGV 765
L + LD F+G+ F GGFSYAD LGSAKGWAA++ N + +L +F R DTFS GV
Sbjct: 1031 LCSGAVRLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFNPQAREELGRFRRRPDTFSLGV 1090
Query: 766 CNGCQLMNLLGW 777
CNGCQL+ LLGW
Sbjct: 1091 CNGCQLLALLGW 1102
Score = 190 (71.9 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNE 581
E+GLA D WDL++YT F+ +L+RNP++VE FDLAQSNSEHSRHWFFK + V+ +
Sbjct: 119 ELGLALDSWDLDFYTKRFQ-ELQRNPSTVEVFDLAQSNSEHSRHWFFKGQLHVDGK 173
Score = 125 (49.1 bits), Expect = 7.7e-73, Sum P(3) = 7.7e-73
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 574 ISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQP 631
+ V+VN V+ E +G L +WE TS++L+ LQ RC EE L RIGP Y P
Sbjct: 923 VRVSVNGTVVVEEPVGQLRALWEETSFQLDLLQAEPRCVTEEKQGLKERIGPSYCLPP 980
Score = 96 (38.9 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + + +P+ + DD+ TE YP+NPNGSPG
Sbjct: 1169 GYMAFSSPELQAKIKAKGLVPLHWADDDGNPTEQYPLNPNGSPG 1212
Score = 84 (34.6 bits), Expect = 2.2e-56, Sum P(4) = 2.2e-56
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 456 SFYDRMTECVYSSPLTSFNHGIKPDPWF-YVDVMGKGKVALQEVNQKLG 503
+ +DRMTE Y P+ SF+ P P ++++ +G+ AL++ NQ+LG
Sbjct: 73 ALHDRMTEQHYPDPIQSFSPQSIPAPLKDSINILAEGRPALEKANQELG 121
Score = 55 (24.4 bits), Expect = 2.2e-53, Sum P(4) = 2.2e-53
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 404 SFYDRMTECVYSSPLTSFNHGIKPDPWF-YVDVMGKGKVA 442
+ +DRMTE Y P+ SF+ P P ++++ +G+ A
Sbjct: 73 ALHDRMTEQHYPDPIQSFSPQSIPAPLKDSINILAEGRPA 112
>UNIPROTKB|O15067 [details] [associations]
symbol:PFAS "Phosphoribosylformylglycinamidine synthase"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006541 "glutamine metabolic process" evidence=IEA] [GO:0042493
"response to drug" evidence=IEA] [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=IEA;NAS] [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=NAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006144 "purine nucleobase metabolic process"
evidence=TAS] [GO:0009168 "purine ribonucleoside monophosphate
biosynthetic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055086 "nucleobase-containing
small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 UniPathway:UPA00074 GO:GO:0005829
GO:GO:0005524 GO:GO:0006144 DrugBank:DB00130 DrugBank:DB00142
EMBL:AC135178 GO:GO:0006189 GO:GO:0006541 InterPro:IPR017926
PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 eggNOG:COG0046 HOGENOM:HOG000261358 KO:K01952
GO:GO:0004642 TIGRFAMs:TIGR01735 EMBL:AB002359 EMBL:BC146768
EMBL:BC167158 IPI:IPI00004534 RefSeq:NP_036525.1 UniGene:Hs.573976
ProteinModelPortal:O15067 SMR:O15067 IntAct:O15067 STRING:O15067
MEROPS:C56.972 PhosphoSite:O15067 PaxDb:O15067 PRIDE:O15067
Ensembl:ENST00000314666 GeneID:5198 KEGG:hsa:5198 UCSC:uc002gkr.3
CTD:5198 GeneCards:GC17P008152 H-InvDB:HIX0019361 HGNC:HGNC:8863
HPA:HPA022140 HPA:HPA022886 MIM:602133 neXtProt:NX_O15067
HOVERGEN:HBG108309 InParanoid:O15067 OMA:SASAKMC OrthoDB:EOG4WDD9X
PhylomeDB:O15067 ChiTaRS:PFAS GenomeRNAi:5198 NextBio:20106
ArrayExpress:O15067 Bgee:O15067 CleanEx:HS_PFAS
Genevestigator:O15067 GermOnline:ENSG00000178921 Uniprot:O15067
Length = 1338
Score = 385 (140.6 bits), Expect = 3.3e-72, Sum P(3) = 3.3e-72
Identities = 79/120 (65%), Positives = 93/120 (77%)
Query: 53 FTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGP 112
F L R P PP +SV QAL V+RL +V SKR+LTNKVDR V GL+AQQQCVGP
Sbjct: 641 FFLQRKPPMLQPLALPPGLSVHQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGP 700
Query: 113 LHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
L TPLADVAVVAL H +L GAAT++GEQP+K L+DPK AR+AVAEALTNLVFA ++DL+
Sbjct: 701 LQTPLADVAVVALSHEELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLR 760
Score = 352 (129.0 bits), Expect = 3.3e-72, Sum P(3) = 3.3e-72
Identities = 70/132 (53%), Positives = 85/132 (64%)
Query: 647 RIGPKYQYQPVRDDI-VGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQD 705
R+GP Y P V G +A+LREEG NGDREM+ + GFEVWD+T+QD
Sbjct: 1038 RMGPSYCLPPTFPKASVPREPGGPSPRVAILREEGSNGDREMADAFHLAGFEVWDVTMQD 1097
Query: 706 LLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGV 765
L I LD F+G+ F GGFSYAD LGSAKGWAA++ + +L +F R DTFS GV
Sbjct: 1098 LCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFHPRAGAELRRFRKRPDTFSLGV 1157
Query: 766 CNGCQLMNLLGW 777
CNGCQL+ LLGW
Sbjct: 1158 CNGCQLLALLGW 1169
Score = 194 (73.4 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 35/60 (58%), Positives = 49/60 (81%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLN 585
E+GLA D WDL++YT F+ +L+RNP++VE FDLAQSNSEHSRHWFFK + V+ + +++
Sbjct: 190 ELGLALDSWDLDFYTKRFQ-ELQRNPSTVEAFDLAQSNSEHSRHWFFKGQLHVDGQKLVH 248
Score = 135 (52.6 bits), Expect = 3.3e-72, Sum P(3) = 3.3e-72
Identities = 32/86 (37%), Positives = 44/86 (51%)
Query: 547 LKR-NPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKL 605
LKR + C +L + E H ++SV N VL E +G L +WE TS++L++L
Sbjct: 965 LKRYRDAGLHCLELGHTG-EAGPHAMVRVSV--NGAVVLEEPVGELRALWEETSFQLDRL 1021
Query: 606 QMNARCADEEYNSLVTRIGPKYQYQP 631
Q RC EE L R+GP Y P
Sbjct: 1022 QAEPRCVAEEERGLRERMGPSYCLPP 1047
Score = 96 (38.9 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + ++ P+ + DD+ TE YP+NPNGSPG
Sbjct: 1236 GYVAFSSPELQAQIEARGLAPLHWADDDGNPTEQYPLNPNGSPG 1279
Score = 93 (37.8 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 18/49 (36%), Positives = 34/49 (69%)
Query: 456 SFYDRMTECVYSSPLTSFNHGIKPDPWFY-VDVMGKGKVALQEVNQKLG 503
+ +DRMTE + P+ SF+ P+P ++++G+G++AL++ NQ+LG
Sbjct: 144 TLHDRMTEQHFPHPIQSFSPESMPEPLNGPINILGEGRLALEKANQELG 192
Score = 64 (27.6 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 404 SFYDRMTECVYSSPLTSFNHGIKPDPWFY-VDVMGKGKVA 442
+ +DRMTE + P+ SF+ P+P ++++G+G++A
Sbjct: 144 TLHDRMTEQHFPHPIQSFSPESMPEPLNGPINILGEGRLA 183
Score = 49 (22.3 bits), Expect = 2.3e-31, Sum P(2) = 2.3e-31
Identities = 19/67 (28%), Positives = 25/67 (37%)
Query: 215 DDNNKITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNV-T 273
D N E P + PG R +GRY ++ V G P G G V V +
Sbjct: 1173 DPNEDAAEMGPDSQPARPGLLLRHNLSGRYESRWASVRVGPG-PALMLRGMEGAVLPVWS 1231
Query: 274 QHAVGVI 280
H G +
Sbjct: 1232 AHGEGYV 1238
>MGI|MGI:2684864 [details] [associations]
symbol:Pfas "phosphoribosylformylglycinamidine synthase
(FGAR amidotransferase)" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006164
"purine nucleotide biosynthetic process" evidence=IEA] [GO:0006189
"'de novo' IMP biosynthetic process" evidence=IEA] [GO:0006541
"glutamine metabolic process" evidence=ISO] [GO:0009156
"ribonucleoside monophosphate biosynthetic process" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586
UniPathway:UPA00074 MGI:MGI:2684864 GO:GO:0005524 GO:GO:0005737
GO:GO:0006189 GO:GO:0006541 EMBL:AL645902 InterPro:IPR017926
PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 eggNOG:COG0046 HOGENOM:HOG000261358 KO:K01952
GO:GO:0004642 TIGRFAMs:TIGR01735 GeneTree:ENSGT00390000007600
HSSP:P74881 CTD:5198 OMA:SASAKMC OrthoDB:EOG4WDD9X EMBL:BC114997
EMBL:AK172938 IPI:IPI00265406 RefSeq:NP_001152991.1
UniGene:Mm.340288 ProteinModelPortal:Q5SUR0 SMR:Q5SUR0
STRING:Q5SUR0 PhosphoSite:Q5SUR0 PaxDb:Q5SUR0 PRIDE:Q5SUR0
Ensembl:ENSMUST00000021282 GeneID:237823 KEGG:mmu:237823
UCSC:uc007jot.2 InParanoid:Q5SUR0 NextBio:383508 Bgee:Q5SUR0
Genevestigator:Q5SUR0 Uniprot:Q5SUR0
Length = 1337
Score = 387 (141.3 bits), Expect = 4.0e-72, Sum P(3) = 4.0e-72
Identities = 80/125 (64%), Positives = 96/125 (76%)
Query: 49 IPQV-FTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQ 107
+PQ F L R P PP +SV QALN V+RL +V SKR+LTNKVDR V GL+AQQ
Sbjct: 635 MPQKEFFLQRKPPVLQPLALPPELSVRQALNRVLRLPAVASKRYLTNKVDRSVGGLVAQQ 694
Query: 108 QCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAK 167
QCVGPL TPLADVAVVAL H + GAAT++GEQP+K L+DPK AR+AV+EALTNLVFA
Sbjct: 695 QCVGPLQTPLADVAVVALSHQECIGAATALGEQPVKSLLDPKAAARLAVSEALTNLVFAL 754
Query: 168 ISDLK 172
++DL+
Sbjct: 755 VTDLR 759
Score = 367 (134.2 bits), Expect = 4.0e-72, Sum P(3) = 4.0e-72
Identities = 72/133 (54%), Positives = 87/133 (65%)
Query: 647 RIGPKYQYQPVRDDIVGATL--GKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQ 704
R GP Y Y P + G V +A+LREEG NGDREM+ + GFEVWD+T+Q
Sbjct: 1037 RTGPSY-YLPPTFPVASVPCKPGGPVPRVAILREEGSNGDREMADAFHLAGFEVWDVTMQ 1095
Query: 705 DLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFG 764
DL I LD F+G+ F GGFSYAD LGSAKGWAA++ N + +L +F R DTFS G
Sbjct: 1096 DLCSGAIRLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFNPQAREELGRFRRRPDTFSLG 1155
Query: 765 VCNGCQLMNLLGW 777
VCNGCQL+ LLGW
Sbjct: 1156 VCNGCQLLALLGW 1168
Score = 190 (71.9 bits), Expect = 6.1e-56, Sum P(4) = 6.1e-56
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNE 581
E+GLA D WDL++YT F+ +L+RNP++VE FDLAQSNSEHSRHWFFK + V+ +
Sbjct: 190 ELGLALDSWDLDFYTKRFQ-ELQRNPSTVEVFDLAQSNSEHSRHWFFKGQLHVDGK 244
Score = 117 (46.2 bits), Expect = 4.0e-72, Sum P(3) = 4.0e-72
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 576 VAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQP 631
++VN V+ E +G L +WE TS++L+ LQ RC EE L R GP Y P
Sbjct: 991 ISVNKAVVVEEPVGELRALWEETSFQLDLLQAEPRCVIEEKQGLKERTGPSYYLPP 1046
Score = 99 (39.9 bits), Expect = 8.0e-37, Sum P(2) = 8.0e-37
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + ++ +P+ + DD+ TE YP+NPNGSPG
Sbjct: 1235 GYMAFSSPELQAKIEAKGLVPLHWADDDGNPTEQYPLNPNGSPG 1278
Score = 89 (36.4 bits), Expect = 6.1e-56, Sum P(4) = 6.1e-56
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 456 SFYDRMTECVYSSPLTSFNHGIKPDPWF-YVDVMGKGKVALQEVNQKLG 503
+ +DRMTE Y P+ SF+ P P +D++ +G+ AL++ NQ+LG
Sbjct: 144 ALHDRMTEQHYPDPIQSFSPQSIPAPLKGSIDILAEGRPALEKANQELG 192
Score = 60 (26.2 bits), Expect = 6.2e-53, Sum P(4) = 6.2e-53
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 404 SFYDRMTECVYSSPLTSFNHGIKPDPWF-YVDVMGKGKVA 442
+ +DRMTE Y P+ SF+ P P +D++ +G+ A
Sbjct: 144 ALHDRMTEQHYPDPIQSFSPQSIPAPLKGSIDILAEGRPA 183
>UNIPROTKB|E2QYQ9 [details] [associations]
symbol:PFAS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=IEA] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586 GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 GeneTree:ENSGT00390000007600 CTD:5198
EMBL:AAEX03003641 RefSeq:XP_850167.2 ProteinModelPortal:E2QYQ9
Ensembl:ENSCAFT00000026959 GeneID:489490 KEGG:cfa:489490
NextBio:20862664 Uniprot:E2QYQ9
Length = 1341
Score = 382 (139.5 bits), Expect = 7.2e-72, Sum P(3) = 7.2e-72
Identities = 75/105 (71%), Positives = 89/105 (84%)
Query: 68 PPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVH 127
PP + V QAL V+RL +V SKR+LTNKVDR V GL+AQQQCVGPLHTPLADVAVVAL H
Sbjct: 656 PPGLRVRQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLHTPLADVAVVALSH 715
Query: 128 NDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
+L GAAT++GEQP+K L+DPK AR+AVAEALTNLVFA ++DL+
Sbjct: 716 QELIGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLR 760
Score = 357 (130.7 bits), Expect = 7.2e-72, Sum P(3) = 7.2e-72
Identities = 73/143 (51%), Positives = 92/143 (64%)
Query: 647 RIGPKYQYQPVRDDI-VGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQD 705
R+GP+Y V G V +A+LREEG NGDREM+ + GFEVWD+T QD
Sbjct: 1038 RMGPRYCLPAAFPKASVPREPGGPVPRVAILREEGSNGDREMADAFHLAGFEVWDVTTQD 1097
Query: 706 LLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGV 765
L I LD F+G+ F GGFSYAD LGSAKGWAA++ + + +L +F R DTFS GV
Sbjct: 1098 LCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFHPVARAELRRFRKRPDTFSLGV 1157
Query: 766 CNGCQLMNLLGWF--SVSTQARQ 786
CNGCQL+ LLGW S S +A++
Sbjct: 1158 CNGCQLLALLGWVGGSPSEEAKE 1180
Score = 192 (72.6 bits), Expect = 5.5e-44, Sum P(3) = 5.5e-44
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 520 CIVQR--HEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFK 573
C +++ E+GLA D WDL++YT F+ +L+RNP++VE FDLAQSNSEHSRHWFFK
Sbjct: 182 CALEKANQELGLALDSWDLDFYTKRFQ-ELQRNPSTVEAFDLAQSNSEHSRHWFFK 236
Score = 130 (50.8 bits), Expect = 7.2e-72, Sum P(3) = 7.2e-72
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 547 LKR-NPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKL 605
LKR + C +L + + H ++SV N VL E +G L +WE TS++L++L
Sbjct: 965 LKRYRVAGLHCMELGPTG-DAGPHALVRVSV--NGAVVLEEAVGQLRAVWEETSFQLDRL 1021
Query: 606 QMNARCADEEYNSLVTRIGPKY 627
Q RC EE L R+GP+Y
Sbjct: 1022 QAEPRCVAEEEQGLRERMGPRY 1043
Score = 110 (43.8 bits), Expect = 2.0e-37, Sum P(2) = 2.0e-37
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + ++ P+ + DDN K TE YPMNPNGSPG
Sbjct: 1239 GYMAFSSPELQAQIEARGLAPLHWADDNGKPTEQYPMNPNGSPG 1282
Score = 84 (34.6 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 456 SFYDRMTECVYSSPLTSFNHGIKPDPWF-YVDVMGKGKVALQEVNQKLG 503
+ +DRMTE + P+ SF+ G P +++++ +G+ AL++ NQ+LG
Sbjct: 144 TLHDRMTEQHFPHPIQSFSLGSISTPLNGHINILAEGRCALEKANQELG 192
Score = 55 (24.4 bits), Expect = 5.5e-44, Sum P(3) = 5.5e-44
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 404 SFYDRMTECVYSSPLTSFNHGIKPDPWF-YVDVMGKGKVA 442
+ +DRMTE + P+ SF+ G P +++++ +G+ A
Sbjct: 144 TLHDRMTEQHFPHPIQSFSLGSISTPLNGHINILAEGRCA 183
>ZFIN|ZDB-GENE-030131-4420 [details] [associations]
symbol:pfas "phosphoribosylformylglycinamidine
synthase" species:7955 "Danio rerio" [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=IEA]
[GO:0006189 "'de novo' IMP biosynthetic process" evidence=IEA]
InterPro:IPR000728 InterPro:IPR010073 InterPro:IPR016188
Pfam:PF00586 ZFIN:ZDB-GENE-030131-4420 GO:GO:0016740 GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 EMBL:BX322665 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0046
HOGENOM:HOG000261358 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 GeneTree:ENSGT00390000007600 CTD:5198
HOVERGEN:HBG108309 OrthoDB:EOG4WDD9X IPI:IPI00481638
RefSeq:NP_001038667.1 UniGene:Dr.77652 Ensembl:ENSDART00000012581
GeneID:570437 KEGG:dre:570437 InParanoid:Q5TZ72 NextBio:20890128
Uniprot:Q5TZ72
Length = 1314
Score = 381 (139.2 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 78/105 (74%), Positives = 88/105 (83%)
Query: 68 PPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVH 127
P +SVL AL V+RL +V SKR+LTNKVDR VTGL+AQQQCVGPLHTPLADVAVVAL
Sbjct: 645 PAGLSVLPALERVLRLPAVASKRYLTNKVDRSVTGLVAQQQCVGPLHTPLADVAVVALSP 704
Query: 128 NDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
L+GAAT+IGEQPIKGL+ P GARMAV EALTNLVFA++S LK
Sbjct: 705 FSLQGAATAIGEQPIKGLLSPAAGARMAVGEALTNLVFARVSALK 749
Score = 353 (129.3 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 68/127 (53%), Positives = 84/127 (66%)
Query: 651 KYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENK 710
K + P + I+ K +AV+REEG NGDREMSA + GFEVWD+T+QDL
Sbjct: 1033 KLTFDPSQTPIIKELATGKA-RVAVVREEGSNGDREMSASLFMAGFEVWDVTMQDLCSGS 1091
Query: 711 ITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQ 770
TLD F+ +VF GGFSYAD LGSAKGWAA++ N + + +F R DT S GVCNGCQ
Sbjct: 1092 TTLDPFRAVVFVGGFSYADVLGSAKGWAATVTFNNRAREEFERFRKREDTLSLGVCNGCQ 1151
Query: 771 LMNLLGW 777
L+ LLGW
Sbjct: 1152 LLALLGW 1158
Score = 224 (83.9 bits), Expect = 8.5e-56, Sum P(3) = 8.5e-56
Identities = 43/67 (64%), Positives = 53/67 (79%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLN 585
E+GLAFD WDL+YYT +F+ K+KRNPTSVECFDLAQSNSEHSRHWFF+ + ++ +
Sbjct: 186 ELGLAFDSWDLDYYTALFQ-KVKRNPTSVECFDLAQSNSEHSRHWFFRGRMVIDGK---- 240
Query: 586 EDLGTLF 592
E TLF
Sbjct: 241 EQKETLF 247
Score = 140 (54.3 bits), Expect = 8.5e-56, Sum P(3) = 8.5e-56
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 458 YDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
YD MTEC+Y+ P+TSF I+P F VD++GKG+ AL++ N +LG
Sbjct: 143 YDSMTECIYAQPITSFAVDIRPQDVFEVDILGKGRAALEKANDELG 188
Score = 128 (50.1 bits), Expect = 3.6e-71, Sum P(3) = 3.6e-71
Identities = 29/67 (43%), Positives = 38/67 (56%)
Query: 573 KISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGP--KYQYQ 630
K+ V++ VLNE L TL IWE TS+ELE+LQ N C EE L +R P K +
Sbjct: 978 KVRVSLCGREVLNERLPTLRAIWESTSFELERLQANPLCVQEEEQGLASRTQPYLKLTFD 1037
Query: 631 PVRDDIV 637
P + I+
Sbjct: 1038 PSQTPII 1044
Score = 121 (47.7 bits), Expect = 8.6e-44, Sum P(3) = 8.6e-44
Identities = 39/118 (33%), Positives = 56/118 (47%)
Query: 357 NMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVD-IKCAESFYDRMTECVYS 415
++ S G + TR SR RH P K G++ I C YD MTEC+Y+
Sbjct: 99 SICQSAGLSQVTRVELSR---RHLIKPQEGCKVGMKDGEMESLISC---LYDSMTECIYA 152
Query: 416 SPLTSFNHGIKPDPWFYVDVMGKGKVAFN-SNS---LVFFQCAESFYDRMTECVYSSP 469
P+TSF I+P F VD++GKG+ A +N L F +Y + + V +P
Sbjct: 153 QPITSFAVDIRPQDVFEVDILGKGRAALEKANDELGLAFDSWDLDYYTALFQKVKRNP 210
Score = 100 (40.3 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 28/81 (34%), Positives = 38/81 (46%)
Query: 171 LKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNG 230
LK + S+ + + H G F++ L S P+RYVDD+ TE YP+NPNG
Sbjct: 1196 LKGMEGSALGVWVAHGE--GLMQFRSPEAQQKLIGSSLAPLRYVDDSGNPTEIYPINPNG 1253
Query: 231 SP-GKRERKKKTGRYLGKYGH 250
S G GR+L H
Sbjct: 1254 SAQGVAGICSADGRHLAMMPH 1274
Score = 38 (18.4 bits), Expect = 3.7e-35, Sum P(3) = 3.7e-35
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 173 FLFASSRSIHIFHYSFSGR 191
F A S S H H+ F GR
Sbjct: 216 FDLAQSNSEHSRHWFFRGR 234
Score = 38 (18.4 bits), Expect = 9.8e-27, Sum P(2) = 9.8e-27
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 625 PKYQYQPVRDDIVGATLGKKVTRIGPKYQY 654
P Y + + + A G ++ IGP+ +
Sbjct: 60 PPYSVSLLEEPTLKAEHGARLVEIGPRLNF 89
Score = 37 (18.1 bits), Expect = 1.1e-29, Sum P(2) = 1.1e-29
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 412 CVYSSPLTSFNHGIKPDPWFYVDVMGKGK-----VAFNSNSLVFFQ 452
C S+ L F + + Y DV+G K V FN+ + F+
Sbjct: 1088 CSGSTTLDPFRAVVFVGGFSYADVLGSAKGWAATVTFNNRAREEFE 1133
>UNIPROTKB|I3L712 [details] [associations]
symbol:PFAS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=IEA] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586 GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 GeneTree:ENSGT00390000007600 CTD:5198
EMBL:CU571295 RefSeq:XP_003358324.1 Ensembl:ENSSSCT00000024827
GeneID:100620093 KEGG:ssc:100620093 Uniprot:I3L712
Length = 1338
Score = 379 (138.5 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 75/105 (71%), Positives = 89/105 (84%)
Query: 68 PPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVH 127
PP +SV QAL V+RL +V SKR+LTNKVDR V GL+AQQQCVGPL TPLADVAVVAL H
Sbjct: 656 PPGLSVRQALERVLRLPAVASKRYLTNKVDRSVGGLVAQQQCVGPLQTPLADVAVVALSH 715
Query: 128 NDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
+L GAAT++GEQP+K L+DPK AR+AVAEALTNLVFA ++DL+
Sbjct: 716 QELVGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFALVTDLR 760
Score = 352 (129.0 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 70/132 (53%), Positives = 82/132 (62%)
Query: 647 RIGPKYQYQPVRDDI-VGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQD 705
R GP Y P V G +A+ REEG NGDREM+ + GFEVWD+T+QD
Sbjct: 1038 RTGPTYYLPPTFPKASVPHAPGGAAPRVAIFREEGSNGDREMADAFHLAGFEVWDVTMQD 1097
Query: 706 LLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGV 765
L I LD F+G F GGFSYAD LGSAKGWAA++ N +L +F R DTFS GV
Sbjct: 1098 LCSGAIGLDTFRGAAFVGGFSYADVLGSAKGWAAAVTFNPRAGAELRRFRERPDTFSLGV 1157
Query: 766 CNGCQLMNLLGW 777
CNGCQL+ LLGW
Sbjct: 1158 CNGCQLLALLGW 1169
Score = 187 (70.9 bits), Expect = 7.1e-47, Sum P(3) = 7.1e-47
Identities = 34/48 (70%), Positives = 41/48 (85%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFK 573
E+GLA D WDL++YT F+ +L+RNP+ VE FDLAQSNSEHSRHWFFK
Sbjct: 190 ELGLALDSWDLDFYTKRFQ-ELQRNPSIVEAFDLAQSNSEHSRHWFFK 236
Score = 121 (47.7 bits), Expect = 4.5e-70, Sum P(3) = 4.5e-70
Identities = 34/113 (30%), Positives = 52/113 (46%)
Query: 519 LCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAV 578
L ++ E GLA + + D+ R + + + C +L + H +ISV
Sbjct: 942 LPVLFAEEPGLALEVQE----PDLARVLARYRDSGLHCLELG-CTGDAGPHAMVRISV-- 994
Query: 579 NNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQP 631
N + E +G L +WE TS++LE+LQ +C EE L R GP Y P
Sbjct: 995 NGAVAVEEPVGRLRSLWEETSFQLERLQAEPQCVAEEELGLRERTGPTYYLPP 1047
Score = 97 (39.2 bits), Expect = 9.8e-36, Sum P(2) = 9.8e-36
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + ++ P+ + DD+ TE YP+NPNGSPG
Sbjct: 1236 GYMAFSSPELQAQIEARGLAPLHWADDDGNPTEQYPLNPNGSPG 1279
Score = 93 (37.8 bits), Expect = 7.1e-47, Sum P(3) = 7.1e-47
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 456 SFYDRMTECVYSSPLTSFNHGIKPDPWFY-VDVMGKGKVALQEVNQKLG 503
+ +DRMTE + P+ SF+ G P P +D++ +G+ AL++ NQ+LG
Sbjct: 144 TLHDRMTEQHFPRPIQSFSLGCVPAPLSGPIDILAEGRSALEKANQELG 192
Score = 64 (27.6 bits), Expect = 7.5e-44, Sum P(3) = 7.5e-44
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 404 SFYDRMTECVYSSPLTSFNHGIKPDPWFY-VDVMGKGKVA 442
+ +DRMTE + P+ SF+ G P P +D++ +G+ A
Sbjct: 144 TLHDRMTEQHFPRPIQSFSLGCVPAPLSGPIDILAEGRSA 183
Score = 39 (18.8 bits), Expect = 2.2e-34, Sum P(3) = 2.2e-34
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 173 FLFASSRSIHIFHYSFSGR 191
F A S S H H+ F GR
Sbjct: 220 FDLAQSNSEHSRHWFFKGR 238
Score = 39 (18.8 bits), Expect = 2.2e-34, Sum P(3) = 2.2e-34
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 6 HPGAFSRVPYHGAHSSQHIRAPGPEQRHAPCISHIVTLTSYISIPQVFTLARA 58
HPG R+ Y QH R G A C S + + +P+ L RA
Sbjct: 844 HPGGRGRLLYVPLSPGQH-RLGGTAL--AQCFSQLGEQPPDLDLPE--NLVRA 891
>UNIPROTKB|F1N4K1 [details] [associations]
symbol:PFAS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=IEA] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586 GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 GeneTree:ENSGT00390000007600 CTD:5198
EMBL:DAAA02048815 IPI:IPI00727269 RefSeq:NP_001243493.1
UniGene:Bt.63778 Ensembl:ENSBTAT00000044654 GeneID:520318
KEGG:bta:520318 NextBio:20873080 Uniprot:F1N4K1
Length = 1338
Score = 377 (137.8 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 80/125 (64%), Positives = 96/125 (76%)
Query: 49 IPQV-FTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQ 107
+PQ F L R+ PP +SV QAL V+RL +V SKR+LTNKVDR V GL+AQQ
Sbjct: 636 MPQKEFFLQRSLPLLQPLTLPPGLSVRQALARVLRLPAVASKRYLTNKVDRSVGGLVAQQ 695
Query: 108 QCVGPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAK 167
QCVGPL TPLADVAVVAL H +L GAAT++GEQP+K L+DPK AR+AVAEALTNLVFA
Sbjct: 696 QCVGPLQTPLADVAVVALSHQELVGAATALGEQPVKSLLDPKVAARLAVAEALTNLVFAL 755
Query: 168 ISDLK 172
++DL+
Sbjct: 756 VTDLQ 760
Score = 349 (127.9 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 69/137 (50%), Positives = 86/137 (62%)
Query: 647 RIGPKYQYQPVRDDI-VGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQD 705
R GP + P V G +A++REEG NGDREM+ + GFEVWD+T+QD
Sbjct: 1038 RAGPTFCLPPTFPRASVPCEPGGPAPRVAIIREEGSNGDREMADAFHLAGFEVWDVTMQD 1097
Query: 706 LLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGV 765
L I LD F+G+ F GGFSYAD LGSAKGWAA++ N ++ +F R DTFS GV
Sbjct: 1098 LCSGAIGLDTFRGVAFVGGFSYADVLGSAKGWAAAVTFNPQAGAEMKRFRQRPDTFSLGV 1157
Query: 766 CNGCQLMNLLGWFSVST 782
CNGCQL+ LLGW S+
Sbjct: 1158 CNGCQLLALLGWVGGSS 1174
Score = 190 (71.9 bits), Expect = 3.6e-47, Sum P(3) = 3.6e-47
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNE 581
E+GLA D WDL++YT F+ +L+RNP++VE FDLAQSNSEHSRHWFFK + V+ +
Sbjct: 190 ELGLALDSWDLDFYTKRFQ-ELQRNPSTVEVFDLAQSNSEHSRHWFFKGRLHVDGQ 244
Score = 113 (44.8 bits), Expect = 1.1e-68, Sum P(3) = 1.1e-68
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 549 RNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMN 608
RN + C +L + + H ++SV N VL E +G L +WE TS++L++LQ
Sbjct: 969 RN-AGLHCLELGLTG-DTGPHAMVRVSV--NRTVVLEEPVGQLRALWEETSFQLDRLQAK 1024
Query: 609 ARCADEEYNSLVTRIGPKYQYQP 631
C +E L R GP + P
Sbjct: 1025 PHCVAQEEQGLRERAGPTFCLPP 1047
Score = 97 (39.2 bits), Expect = 1.6e-35, Sum P(2) = 1.6e-35
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPG 233
G AF + + ++ P+ + DD+ TE YP+NPNGSPG
Sbjct: 1236 GYMAFSSPELQAQMEARGLAPLHWADDDGNPTEQYPLNPNGSPG 1279
Score = 96 (38.9 bits), Expect = 3.6e-47, Sum P(3) = 3.6e-47
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 456 SFYDRMTECVYSSPLTSFNHGIKPDPWFY-VDVMGKGKVALQEVNQKLG 503
+ +DRMTE + P+ SF+ G P P +DV+ +G+ AL++ NQ+LG
Sbjct: 144 TLHDRMTEQHFPQPIQSFSSGCIPAPLSGPIDVLAEGRSALEKANQELG 192
Score = 68 (29.0 bits), Expect = 3.0e-44, Sum P(3) = 3.0e-44
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 395 DIVDIKCAESFYDRMTECVYSSPLTSFNHGIKPDPWFY-VDVMGKGKVA 442
D+ I A + +DRMTE + P+ SF+ G P P +DV+ +G+ A
Sbjct: 136 DLEAIALA-TLHDRMTEQHFPQPIQSFSSGCIPAPLSGPIDVLAEGRSA 183
Score = 39 (18.8 bits), Expect = 3.2e-33, Sum P(3) = 3.2e-33
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 173 FLFASSRSIHIFHYSFSGR 191
F A S S H H+ F GR
Sbjct: 220 FDLAQSNSEHSRHWFFKGR 238
>TAIR|locus:2019637 [details] [associations]
symbol:PUR4 "purine biosynthesis 4" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=IEA;TAS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0055046
"microgametogenesis" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 UniPathway:UPA00074 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005739 GO:GO:0005524 GO:GO:0009507
GO:GO:0006189 GO:GO:0006541 InterPro:IPR017926 PROSITE:PS51273
EMBL:AC020579 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 EMBL:EU091297 IPI:IPI00884609 PIR:A96771
RefSeq:NP_177566.3 UniGene:At.34898 ProteinModelPortal:Q9M8D3
SMR:Q9M8D3 STRING:Q9M8D3 PaxDb:Q9M8D3 PRIDE:Q9M8D3 ProMEX:Q9M8D3
GeneID:843766 KEGG:ath:AT1G74260 TAIR:At1g74260 eggNOG:COG0046
HOGENOM:HOG000261358 InParanoid:Q9M8D3 KO:K01952 OMA:TVKAVGM
Genevestigator:Q9M8D3 GermOnline:AT1G74260 GO:GO:0004642
TIGRFAMs:TIGR01735 Uniprot:Q9M8D3
Length = 1407
Score = 375 (137.1 bits), Expect = 3.5e-64, Sum P(3) = 3.5e-64
Identities = 69/105 (65%), Positives = 80/105 (76%)
Query: 673 IAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALG 732
+AV+REEG NGDREMSA GFE WD+TV DLL ITLD+F+G+VF GGFSYAD L
Sbjct: 1142 VAVIREEGSNGDREMSAAFYAAGFEPWDVTVSDLLAGDITLDQFRGIVFVGGFSYADVLD 1201
Query: 733 SAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGW 777
SAKGWAAS+ NE + +Q +F R DTFS G+CNGCQLM LLGW
Sbjct: 1202 SAKGWAASIRFNEPVLSQFQEFYKRPDTFSLGICNGCQLMALLGW 1246
Score = 341 (125.1 bits), Expect = 3.5e-64, Sum P(3) = 3.5e-64
Identities = 71/109 (65%), Positives = 84/109 (77%)
Query: 69 PNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHN 128
P I+++ AL V+RL SV SKRFLT KVDRCVTGL+AQQQ VGPL LADVAV+A
Sbjct: 737 PGITLMDALKRVLRLPSVSSKRFLTTKVDRCVTGLVAQQQTVGPLQITLADVAVIAQTFT 796
Query: 129 DLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFAS 177
DL G A +IGEQPIKGL+DPK AR+AV EALTNLV+AK++ L + AS
Sbjct: 797 DLTGGACAIGEQPIKGLLDPKAMARLAVGEALTNLVWAKVTALSDVKAS 845
Score = 212 (79.7 bits), Expect = 8.3e-56, Sum P(3) = 8.3e-56
Identities = 38/71 (53%), Positives = 53/71 (74%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLN 585
E+GLAFDE DL+YYT +FR +KR+PT+VE FD+AQSNSEHSRHWFF ++ ++ +P+
Sbjct: 274 EMGLAFDEQDLQYYTRLFREDIKRDPTNVELFDIAQSNSEHSRHWFFAGNMVIDGKPMDK 333
Query: 586 EDLGTLFLIWE 596
+ + WE
Sbjct: 334 SLMQIVKSTWE 344
Score = 130 (50.8 bits), Expect = 8.3e-56, Sum P(3) = 8.3e-56
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 454 AESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
A +DRMTECVY+ L SF + P+ YV VM KG+ AL+E+NQ++G
Sbjct: 227 AAMVHDRMTECVYTQKLVSFETNVVPEEVKYVPVMEKGRKALEEINQEMG 276
Score = 124 (48.7 bits), Expect = 2.4e-34, Sum P(2) = 2.4e-34
Identities = 26/62 (41%), Positives = 33/62 (53%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSP-GKRERKKKTGRYLGKY 248
GR F + G+ DH+ S P+RY DD+ +TE YP N NGSP G GR+L
Sbjct: 1305 GRAYFPDEGVLDHMLHSDLAPLRYCDDDGNVTEAYPFNLNGSPLGIAAICSPDGRHLAMM 1364
Query: 249 GH 250
H
Sbjct: 1365 PH 1366
Score = 97 (39.2 bits), Expect = 1.1e-38, Sum P(3) = 1.1e-38
Identities = 25/64 (39%), Positives = 33/64 (51%)
Query: 402 AESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNS-NS---LVFFQCAESF 457
A +DRMTECVY+ L SF + P+ YV VM KG+ A N L F + +
Sbjct: 227 AAMVHDRMTECVYTQKLVSFETNVVPEEVKYVPVMEKGRKALEEINQEMGLAFDEQDLQY 286
Query: 458 YDRM 461
Y R+
Sbjct: 287 YTRL 290
Score = 81 (33.6 bits), Expect = 3.5e-64, Sum P(3) = 3.5e-64
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 574 ISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQ 628
I V V+ L+E L +WE TS++LEKLQ A C + E L R P ++
Sbjct: 1067 IEVKVDGITHLSEKTSFLRDMWEDTSFQLEKLQRLASCVEMEKEGLKFRHEPNWK 1121
>FB|FBgn0000052 [details] [associations]
symbol:ade2 "adenosine 2" species:7227 "Drosophila
melanogaster" [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=ISS;NAS] [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=ISS;NAS] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586
UniPathway:UPA00074 GO:GO:0005524 EMBL:AE014134 GO:GO:0006189
GO:GO:0006541 InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0046
KO:K01952 OMA:TVKAVGM GO:GO:0004642 TIGRFAMs:TIGR01735
GeneTree:ENSGT00390000007600 EMBL:U00683 EMBL:BT011143 PIR:T13363
RefSeq:NP_477212.1 RefSeq:NP_723146.1 RefSeq:NP_723147.1
UniGene:Dm.4474 ProteinModelPortal:P35421 DIP:DIP-22769N
IntAct:P35421 MINT:MINT-1579795 STRING:P35421 PaxDb:P35421
EnsemblMetazoa:FBtr0079219 EnsemblMetazoa:FBtr0079220
EnsemblMetazoa:FBtr0079221 GeneID:33847 KEGG:dme:Dmel_CG9127
CTD:33847 FlyBase:FBgn0000052 InParanoid:P35421 OrthoDB:EOG4J9KDQ
PhylomeDB:P35421 GenomeRNAi:33847 NextBio:785582 Bgee:P35421
GermOnline:CG9127 Uniprot:P35421
Length = 1354
Score = 331 (121.6 bits), Expect = 6.4e-63, Sum P(3) = 6.4e-63
Identities = 68/104 (65%), Positives = 79/104 (75%)
Query: 68 PPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVH 127
P + + +AL V+ LV+VGSKRFLTNKVDRCV GLIAQQQCVGPL PLAD A+ + H
Sbjct: 664 PKGLLLDEALERVLSLVAVGSKRFLTNKVDRCVGGLIAQQQCVGPLQAPLADYALTTVSH 723
Query: 128 NDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDL 171
G ATSIG QP+KGL+DP ARM VAEAL+NLVF KIS+L
Sbjct: 724 FSHSGIATSIGTQPLKGLLDPAAMARMCVAEALSNLVFVKISEL 767
Score = 322 (118.4 bits), Expect = 6.4e-63, Sum P(3) = 6.4e-63
Identities = 58/107 (54%), Positives = 77/107 (71%)
Query: 671 ISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADA 730
+ +AVLREEG+N +REM A FEV D+T+ DLL+ ++ +++GL+FPGGFSYAD
Sbjct: 1085 VRVAVLREEGVNSEREMMACLLRANFEVHDVTMSDLLQGTASVSQYRGLIFPGGFSYADT 1144
Query: 731 LGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGW 777
LGSAKGWAA++L N + Q F R D FS G+CNGCQLM L+G+
Sbjct: 1145 LGSAKGWAANILHNPRLLPQFEAFKRRQDVFSLGICNGCQLMTLIGF 1191
Score = 192 (72.6 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 33/48 (68%), Positives = 42/48 (87%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFK 573
E+GLAF+++DL+YY D+F +L RNPT+VE FD AQSNSEHSRHWFF+
Sbjct: 194 ELGLAFNDYDLDYYHDLFAKELGRNPTTVELFDCAQSNSEHSRHWFFR 241
Score = 134 (52.2 bits), Expect = 6.4e-63, Sum P(3) = 6.4e-63
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 583 VLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQ 628
+L++ L L+ WERTSYELEKLQ N CA+ EYNSL R P+Y+
Sbjct: 1022 LLDQPLRVLYKKWERTSYELEKLQANPECAEAEYNSLEYRQAPQYR 1067
Score = 132 (51.5 bits), Expect = 3.8e-34, Sum P(2) = 3.8e-34
Identities = 28/62 (45%), Positives = 36/62 (58%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSP-GKRERKKKTGRYLGKY 248
GRFAF++ + HL Q + ++YVDD K TE YP+NPNGSP G GR+L
Sbjct: 1249 GRFAFRDEKLISHLQSEQLVTLQYVDDVGKPTELYPLNPNGSPQGIAGLCSSDGRHLALM 1308
Query: 249 GH 250
H
Sbjct: 1309 PH 1310
Score = 95 (38.5 bits), Expect = 1.9e-53, Sum P(4) = 1.9e-53
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 459 DRMTECVYS---SPLTSFNHGI--KPDPWFYVDVMGKGKVALQEVNQKLG 503
DRMT+C+Y+ +P SF+ + + W +V V+ +G+ AL+ +NQ+LG
Sbjct: 147 DRMTQCLYTEENTPKASFDEQLPERQANWHFVPVLEEGRAALERINQELG 196
Score = 64 (27.6 bits), Expect = 3.1e-50, Sum P(4) = 3.1e-50
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 407 DRMTECVYS---SPLTSFNHGI--KPDPWFYVDVMGKGKVA 442
DRMT+C+Y+ +P SF+ + + W +V V+ +G+ A
Sbjct: 147 DRMTQCLYTEENTPKASFDEQLPERQANWHFVPVLEEGRAA 187
Score = 39 (18.8 bits), Expect = 2.1e-32, Sum P(3) = 2.1e-32
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 176 ASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGS 231
A S S H H+ F GR + D +++ + L IR + D T NPN +
Sbjct: 228 AQSNSEHSRHWFFRGRM------VIDGVEQPKSL-IRMIMDTQAHT-----NPNNT 271
>DICTYBASE|DDB_G0288145 [details] [associations]
symbol:purL "PFAS" species:44689 "Dictyostelium
discoideum" [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=IEA] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=IEA;ISS] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0006164 "purine nucleotide biosynthetic
process" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=IEA;ISS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0006541 "glutamine metabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000728 InterPro:IPR010073 InterPro:IPR016188
Pfam:PF00586 UniPathway:UPA00074 dictyBase:DDB_G0288145
GO:GO:0005524 GO:GO:0005737 GO:GO:0006164 GenomeReviews:CM000154_GR
EMBL:AAFI02000109 GO:GO:0006189 GO:GO:0006541 InterPro:IPR017926
PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 eggNOG:COG0046 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 RefSeq:XP_636865.1 HSSP:P74881
ProteinModelPortal:Q54JC8 STRING:Q54JC8 PRIDE:Q54JC8
EnsemblProtists:DDB0230086 GeneID:8626476 KEGG:ddi:DDB_G0288145
ProtClustDB:CLSZ2429920 Uniprot:Q54JC8
Length = 1355
Score = 379 (138.5 bits), Expect = 2.6e-58, Sum P(2) = 2.6e-58
Identities = 83/213 (38%), Positives = 121/213 (56%)
Query: 579 NNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVG 638
NN +EDL + + ++ Y ++ Q++ + + Y + + P + +++ +
Sbjct: 997 NNNNGSDEDL-FIVKVGDKLIYNIKLSQLSKQWEETSYQLELLQANPTFVESEMKNLLKR 1055
Query: 639 ATLGK-KVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFE 697
AT GK K Y+ P+ ++ A L K +AV+REEG NGDREM+A GF+
Sbjct: 1056 AT-GKGKGPNYNMTYKISPISKEL--ALLANKAPKVAVIREEGSNGDREMAAAFHFAGFQ 1112
Query: 698 VWDITVQDLLENKITLD-RFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIA 756
+D+T+ DLL I LD RFKG+ F GGFSY D + SAKGWA S+ N+ + Q + F
Sbjct: 1113 AFDVTMSDLLNGNIQLDERFKGVAFVGGFSYGDVMDSAKGWAGSIRFNQQVSKQFDHFYG 1172
Query: 757 RSDTFSFGVCNGCQLMNLLGW--FSVSTQARQP 787
R+DTFS G+CNGCQLM LLGW + Q QP
Sbjct: 1173 RNDTFSLGLCNGCQLMALLGWVPYRGIEQTHQP 1205
Score = 312 (114.9 bits), Expect = 2.6e-58, Sum P(2) = 2.6e-58
Identities = 62/97 (63%), Positives = 78/97 (80%)
Query: 75 QALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAA 134
+ LN V+RL+SVGSKRFL NKVDR VTGL+A+QQCVGPLHTP+++VAV++ + GAA
Sbjct: 660 ECLNRVLRLLSVGSKRFLINKVDRAVTGLVARQQCVGPLHTPVSNVAVISSGYFGKSGAA 719
Query: 135 TSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDL 171
TSIGEQPIKG + K A + V EALTNL++A I+DL
Sbjct: 720 TSIGEQPIKGFISAKSMAYLTVGEALTNLMWASITDL 756
Score = 214 (80.4 bits), Expect = 5.3e-48, Sum P(2) = 5.3e-48
Identities = 47/98 (47%), Positives = 62/98 (63%)
Query: 503 GQIGLLFIYF-IVQRTKLCIVQ-RHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLA 560
G I +Y +V+ + + + E+GLAFDE DL YTD+F+N+LKRNP+ VECFD+
Sbjct: 168 GIIPKAVVYIPVVEEGRAALERVNKEMGLAFDEQDLALYTDLFQNQLKRNPSDVECFDIG 227
Query: 561 QSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERT 598
QSNSEHSRHWFF + V+ N TLF I + T
Sbjct: 228 QSNSEHSRHWFFNGKLIVDG----NMSDKTLFQIVKNT 261
Score = 126 (49.4 bits), Expect = 9.3e-39, Sum P(2) = 9.3e-39
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 452 QCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
Q E +DRMTEC+Y +P+ SF+ GI P Y+ V+ +G+ AL+ VN+++G
Sbjct: 144 QFLELIHDRMTECLYPTPIKSFDTGIIPKAVVYIPVVEEGRAALERVNKEMG 195
Score = 115 (45.5 bits), Expect = 2.7e-30, Sum P(2) = 2.7e-30
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSP-GKRERKKKTGRYLGKY 248
GRF ++ I + + + PIRYVDD+ +ITE YP NP+G+ G K GR+L
Sbjct: 1249 GRFWSEDQSIVNDIKANNLSPIRYVDDDGEITESYPFNPSGTQEGFASLCSKDGRHLAIM 1308
Query: 249 GH 250
H
Sbjct: 1309 PH 1310
Score = 98 (39.6 bits), Expect = 8.0e-36, Sum P(2) = 8.0e-36
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 403 ESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVA 442
E +DRMTEC+Y +P+ SF+ GI P Y+ V+ +G+ A
Sbjct: 147 ELIHDRMTECLYPTPIKSFDTGIIPKAVVYIPVVEEGRAA 186
Score = 84 (34.6 bits), Expect = 4.8e-27, Sum P(2) = 4.8e-27
Identities = 37/140 (26%), Positives = 57/140 (40%)
Query: 576 VAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRI-----GPKYQ-- 628
V V ++ + N L L WE TSY+LE LQ N + E +L+ R GP Y
Sbjct: 1009 VKVGDKLIYNIKLSQLSKQWEETSYQLELLQANPTFVESEMKNLLKRATGKGKGPNYNMT 1068
Query: 629 YQ--PVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATL---GKKVISIAV--LREEGI 681
Y+ P+ ++ A L K ++ + D + A G + + + L I
Sbjct: 1069 YKISPISKEL--ALLANKAPKVAVIREEGSNGDREMAAAFHFAGFQAFDVTMSDLLNGNI 1126
Query: 682 NGDREMSAMAQVCGFEVWDI 701
D +A V GF D+
Sbjct: 1127 QLDERFKGVAFVGGFSYGDV 1146
Score = 42 (19.8 bits), Expect = 5.9e-30, Sum P(2) = 5.9e-30
Identities = 25/131 (19%), Positives = 56/131 (42%)
Query: 70 NISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQ--QCVGPLHTPLADVAVV--AL 125
N+S++ + R + + ++D+ + LI + +C+ P D ++ A+
Sbjct: 116 NLSIIDRIERSRRYLVKSVSKLSEKQIDQFLE-LIHDRMTECLYPTPIKSFDTGIIPKAV 174
Query: 126 VH----NDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK-FLFASSRS 180
V+ + R A + ++ GL ++ + + N + SD++ F S S
Sbjct: 175 VYIPVVEEGRAALERVNKE--MGLAFDEQDLAL-YTDLFQNQLKRNPSDVECFDIGQSNS 231
Query: 181 IHIFHYSFSGR 191
H H+ F+G+
Sbjct: 232 EHSRHWFFNGK 242
>WB|WBGene00008654 [details] [associations]
symbol:F10F2.2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=IEA]
[GO:0006189 "'de novo' IMP biosynthetic process" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000728 InterPro:IPR010073 InterPro:IPR016188
Pfam:PF00586 UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737
GO:GO:0040010 GO:GO:0006189 GO:GO:0006541 InterPro:IPR017926
PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 EMBL:Z35598 eggNOG:COG0046 HOGENOM:HOG000261358
OMA:TVKAVGM GO:GO:0004642 TIGRFAMs:TIGR01735 PIR:T20718
RefSeq:NP_497942.2 ProteinModelPortal:Q19311 SMR:Q19311
MINT:MINT-3386428 STRING:Q19311 PaxDb:Q19311 EnsemblMetazoa:F10F2.2
GeneID:175608 KEGG:cel:CELE_F10F2.2 UCSC:F10F2.2 CTD:175608
WormBase:F10F2.2 GeneTree:ENSGT00390000007600 InParanoid:Q19311
NextBio:888888 Uniprot:Q19311
Length = 1324
Score = 360 (131.8 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 74/122 (60%), Positives = 90/122 (73%)
Query: 51 QVFTLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCV 110
+VF L AP P N++V +AL V+ L SV SKR+LT KVDR VTGL+AQQQCV
Sbjct: 614 KVFKLKSAPRVLKKLELPENLTVRKALKRVLMLPSVASKRYLTCKVDRSVTGLVAQQQCV 673
Query: 111 GPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISD 170
GPLHTPLADVAVVAL H D G A S+GEQPIK L+D ++GARM +AE + NL++A I+D
Sbjct: 674 GPLHTPLADVAVVALSHFDTVGGAVSLGEQPIKMLIDAEKGARMCIAETIMNLIWAPITD 733
Query: 171 LK 172
LK
Sbjct: 734 LK 735
Score = 328 (120.5 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
Identities = 80/219 (36%), Positives = 120/219 (54%)
Query: 605 LQMNARCAD--EEYNSLVTRIGPKYQYQP--VRDDI-VGATLGKKVTRIGPKYQYQP--V 657
L++N + D EE+ + R+G ++Q P +++ V T K + + Y P +
Sbjct: 984 LEINEKLVDLREEWELVGDRLG-EFQTNPKSLKEAREVRRTCQKINYKCDFDWYYNPAFI 1042
Query: 658 RDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFK 717
++ +T + +A++REEG NGDREM++ + GF+ +D+T+ D+L TL+ ++
Sbjct: 1043 HNEQYFSTAPR----VAIIREEGSNGDREMASAFTLAGFQTFDVTMTDILAGH-TLEAYR 1097
Query: 718 GLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGW 777
G+ F GGFSYAD LGSAKGWAA + NE + Q F +R DTFS+GVCNGCQLM LGW
Sbjct: 1098 GVAFVGGFSYADVLGSAKGWAAGVQFNESVSKQFEAFRSRPDTFSYGVCNGCQLMAQLGW 1157
Query: 778 FSVSTQARQPYIKSRVRCPPLKKEKSGVNITR-LSITLN 815
Q C V I + +SI L+
Sbjct: 1158 IGDEEQKGPTVFLDENECGRFDSSFGPVKIEKNVSIMLS 1196
Score = 202 (76.2 bits), Expect = 3.4e-41, Sum P(2) = 3.4e-41
Identities = 37/77 (48%), Positives = 55/77 (71%)
Query: 504 QIGLLFIYFIVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSN 563
QI +F+ +++ + I E+GLA D+ DL++Y D F NK+K+NPT VE FDLAQS+
Sbjct: 158 QIEKVFLIDVLESKQNLIKANEELGLALDQLDLDFYYDFFVNKVKKNPTDVELFDLAQSD 217
Query: 564 SEHSRHWFFKISVAVNN 580
SEHSRHWFF+ + +++
Sbjct: 218 SEHSRHWFFRGEIWIDD 234
Score = 70 (29.7 bits), Expect = 2.4e-27, Sum P(2) = 2.4e-27
Identities = 23/74 (31%), Positives = 39/74 (52%)
Query: 450 FFQCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG----QI 505
FF+ A D+MTE +Y + + + + + F +DV+ + K L + N++LG Q+
Sbjct: 133 FFEIAA---DKMTEAIYGNDVKFDDESHQIEKVFLIDVL-ESKQNLIKANEELGLALDQL 188
Query: 506 GLLFIY-FIVQRTK 518
L F Y F V + K
Sbjct: 189 DLDFYYDFFVNKVK 202
Score = 66 (28.3 bits), Expect = 2.0e-30, Sum P(2) = 2.0e-30
Identities = 21/69 (30%), Positives = 30/69 (43%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITED-------YPMNPNGS-PGKRERKKKT 241
GRF ++N + +L + + IR+ DD D YP NPNGS +
Sbjct: 1212 GRFTYRNLQNFQNLKTNGQVCIRFCDDRGMTGADHGSVKLPYPWNPNGSIDDVAAICSRD 1271
Query: 242 GRYLGKYGH 250
GR+L H
Sbjct: 1272 GRHLAMMPH 1280
Score = 54 (24.1 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 391 YKVGDIVDI-KCAESFYDRMTECVYSSPLTSFNHGIKPDPWFYVDVMGKGKVAFNSNS-- 447
Y V D VD+ + E D+MTE +Y + + + + + F +DV+ + +N
Sbjct: 122 YLVEDDVDVNEFFEIAADKMTEAIYGNDVKFDDESHQIEKVFLIDVLESKQNLIKANEEL 181
Query: 448 -LVFFQC-AESFYDRMTECVYSSP 469
L Q + +YD V +P
Sbjct: 182 GLALDQLDLDFYYDFFVNKVKKNP 205
Score = 44 (20.5 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 16/57 (28%), Positives = 22/57 (38%)
Query: 574 ISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQ 630
+ + VN +NE L L WE L + Q N + E V R K Y+
Sbjct: 976 VKIHVNGHLEINEKLVDLREEWELVGDRLGEFQTNPKSLKEARE--VRRTCQKINYK 1030
Score = 39 (18.8 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 94 NKVDRCVTGLIAQQQCVGPLHTPL 117
+KV V L+ +++ GPL P+
Sbjct: 865 SKVFSIVQQLLNREELAGPLRKPI 888
>SGD|S000003293 [details] [associations]
symbol:ADE6 "Formylglycinamidine-ribonucleotide
(FGAM)-synthetase" species:4932 "Saccharomyces cerevisiae"
[GO:0006164 "purine nucleotide biosynthetic process"
evidence=IEA;IMP;TAS] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006189 "'de
novo' IMP biosynthetic process" evidence=IEA;TAS] [GO:0004642
"phosphoribosylformylglycinamidine synthase activity"
evidence=IEA;TAS] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0006541 "glutamine
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 UniPathway:UPA00074 SGD:S000003293
GO:GO:0005524 GO:GO:0005737 EMBL:BK006941 GO:GO:0006164
GO:GO:0006189 GO:GO:0006541 InterPro:IPR017926 PROSITE:PS51273
InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326
eggNOG:COG0046 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 GeneTree:ENSGT00390000007600
HOGENOM:HOG000261359 OrthoDB:EOG4V72QQ EMBL:U14566 EMBL:Z72846
PIR:S64356 RefSeq:NP_011575.1 ProteinModelPortal:P38972 SMR:P38972
DIP:DIP-1175N IntAct:P38972 MINT:MINT-401068 STRING:P38972
PaxDb:P38972 PeptideAtlas:P38972 EnsemblFungi:YGR061C GeneID:852952
KEGG:sce:YGR061C CYGD:YGR061c BioCyc:MetaCyc:MONOMER-486
NextBio:972711 ArrayExpress:P38972 Genevestigator:P38972
GermOnline:YGR061C Uniprot:P38972
Length = 1358
Score = 308 (113.5 bits), Expect = 8.8e-42, Sum P(3) = 8.8e-42
Identities = 69/171 (40%), Positives = 96/171 (56%)
Query: 654 YQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITL 713
Y P D +G L + +A+LRE+G+NG EM+ Q GF D+T+ DLLE + L
Sbjct: 1074 YNPADDMKIGLELSSQRPKVAILREQGVNGQMEMAWCFQQAGFNSVDVTMTDLLEGRFHL 1133
Query: 714 DRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFI-ARSDTFSFGVCNGCQLM 772
D F GL GGFSY D LG+ GWA S+L +EG+++Q +KF R DTF+FG CNGCQ +
Sbjct: 1134 DDFIGLAACGGFSYGDVLGAGAGWAKSVLYHEGVRSQFSKFFNERQDTFAFGACNGCQFL 1193
Query: 773 NLL--------GWFSVSTQARQPYIKSRVRCPPLKKEKSGVNITRLSITLN 815
+ L W S + Y ++RV + +EK N + S+ LN
Sbjct: 1194 SRLKDIIPGCENWPSFERNVSEQY-EARVCMVQISQEKD--NSSEESVFLN 1241
Score = 180 (68.4 bits), Expect = 8.8e-42, Sum P(3) = 8.8e-42
Identities = 46/128 (35%), Positives = 67/128 (52%)
Query: 54 TLARAPGFPTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPL 113
T+ A P A+ S+ A+ V+ L SVGSK FL DR VTGLI + Q VGP
Sbjct: 656 TITEALNLPE-ANLSEIPSLQDAIQRVLNLPSVGSKSFLITIGDRSVTGLIDRDQFVGPW 714
Query: 114 HTPLADVAVVALVHNDL---RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISD 170
P+ADV V + G A ++GE+P+ L+ A+++VAE+L N+ A +
Sbjct: 715 QVPVADVGVTGTSLGETIISTGEAMAMGEKPVNALISASASAKLSVAESLLNIFAADVKS 774
Query: 171 LKFLFASS 178
L + S+
Sbjct: 775 LNHIKLSA 782
Score = 121 (47.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 33/95 (34%), Positives = 44/95 (46%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLN 585
E+GLA D ++EY F +KR+PT VE F AQ NSEH RH F ++ +
Sbjct: 213 ELGLALDSGEMEYLIHAFVETMKRDPTDVELFMFAQVNSEHCRHKIFNADWTIDG---IK 269
Query: 586 EDLGTLFLIWERT-----SYELEKLQMNARCADEE 615
+ TLF + T Y + NA D E
Sbjct: 270 QQF-TLFQMIRNTHKLNPEYTISAYSDNAAVLDSE 303
Score = 98 (39.6 bits), Expect = 8.8e-42, Sum P(3) = 8.8e-42
Identities = 29/110 (26%), Positives = 47/110 (42%)
Query: 543 FRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLFLIWERTSYEL 602
F L N + E + S S+ KI + N+ + L W +TSYE+
Sbjct: 986 FEKILNENGVAKEYISIVGKPSFQSQE--IKIINSTTNDVIYANSRSELEQTWSKTSYEM 1043
Query: 603 EKLQMNARCADEEYNSLVTRIGPKYQY----QPVRDDIVGATLGKKVTRI 648
+KL+ N + A+EE+ S+ P QY P D +G L + ++
Sbjct: 1044 QKLRDNPKTAEEEFASITDDRDPGLQYALTYNPADDMKIGLELSSQRPKV 1093
Score = 84 (34.6 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 19/41 (46%), Positives = 22/41 (53%)
Query: 211 IRYVDDNNKITEDYPMNPNGSP-GKRERKKKTGRYLGKYGH 250
IRYVD+ +TE +P NPNGS G K GR L H
Sbjct: 1279 IRYVDNYGNVTERFPFNPNGSTNGIAGIKSPNGRVLAMMPH 1319
Score = 75 (31.5 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 28/107 (26%), Positives = 54/107 (50%)
Query: 583 VLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVR------DDI 636
+ NE+LG +F I + + EK+ +N +EY S+V + P +Q Q ++ +D+
Sbjct: 967 LFNEELGAVFQISAKNLSKFEKI-LNENGVAKEYISIVGK--PSFQSQEIKIINSTTNDV 1023
Query: 637 VGATLGKKVTRIGPK--YQYQPVRDDIVGATLGKKVISIAVLREEGI 681
+ A ++ + K Y+ Q +RD+ T ++ SI R+ G+
Sbjct: 1024 IYANSRSELEQTWSKTSYEMQKLRDN--PKTAEEEFASITDDRDPGL 1068
Score = 50 (22.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 397 VDIKCAESFYDRMTECVY-SSP---LTSFNHGIKPDPWFYVDVMGK 438
+ +KC YDRMT+ +Y + P ++ F H +P P +V + K
Sbjct: 156 ISLKCV---YDRMTQQLYLTEPPNTMSIFTHE-EPKPLVHVPLTPK 197
Score = 48 (22.0 bits), Expect = 1.9e-30, Sum P(3) = 1.9e-30
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 458 YDRMTECVY-SSP---LTSFNHGIKPDPWFYVDVMGKG-----KVALQEVNQKLG 503
YDRMT+ +Y + P ++ F H +P P +V + K K L + N +LG
Sbjct: 162 YDRMTQQLYLTEPPNTMSIFTHE-EPKPLVHVPLTPKDTKQSPKDILSKANTELG 215
Score = 37 (18.1 bits), Expect = 6.1e-27, Sum P(3) = 6.1e-27
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 302 SRKTC-LAQFYVADGKLSCQLYQRSADMGLGVPFNIAS 338
S+ C L+ F V+D L ++ ++ +G P++IAS
Sbjct: 364 SKTKCGLSGFSVSD--LLIPGNEQPWELNIGKPYHIAS 399
>ASPGD|ASPL0000009625 [details] [associations]
symbol:AN8121 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004642 "phosphoribosylformylglycinamidine
synthase activity" evidence=RCA] [GO:0006189 "'de novo' IMP
biosynthetic process" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=IEA] InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 EMBL:BN001302 GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 EMBL:AACD01000139
InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326
eggNOG:COG0046 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 HOGENOM:HOG000261359 OrthoDB:EOG4V72QQ
RefSeq:XP_681390.1 ProteinModelPortal:Q5AUA9 STRING:Q5AUA9
EnsemblFungi:CADANIAT00004154 GeneID:2869027 KEGG:ani:AN8121.2
Uniprot:Q5AUA9
Length = 1360
Score = 298 (110.0 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 60/181 (33%), Positives = 95/181 (52%)
Query: 595 WERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQY 654
W TSY +++++ NA CAD+EY +++ P + P D PK +
Sbjct: 1035 WASTSYHMQRIRDNAACADQEYANILDDTDPGLSWNPTFD---------------PKDRA 1079
Query: 655 QPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLD 714
P + + +A+LRE+G+N EM+ GF D+ + D++ +++L
Sbjct: 1080 LPFLTSLTSMSPFANKPRVAILREQGVNSQAEMAFAFNTAGFAAIDVHMTDIISGRVSLS 1139
Query: 715 RFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNL 774
F GL GGFSY D LG+ +GWA S+LL++ + + F R DTF+ GVCNGCQ ++
Sbjct: 1140 SFVGLAACGGFSYGDVLGAGQGWAKSVLLHDNTRAEFQSFFNRPDTFALGVCNGCQFLSR 1199
Query: 775 L 775
L
Sbjct: 1200 L 1200
Score = 193 (73.0 bits), Expect = 6.1e-37, Sum P(2) = 6.1e-37
Identities = 49/106 (46%), Positives = 63/106 (59%)
Query: 69 PNISVL--QALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVA-- 124
PN + L +A N V+ L +VGSK FL DR V GL A+ Q VG TP++DVAV A
Sbjct: 662 PNRAELIGEAANRVLSLPAVGSKSFLITIGDRTVGGLTARDQMVGRWQTPVSDVAVTATA 721
Query: 125 LVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISD 170
LV G A ++GE+P L+ P ARMAVAE+L N+ A + D
Sbjct: 722 LVQGAKTGEAMAMGEKPTLALISPGASARMAVAESLMNIAAADLVD 767
Score = 99 (39.9 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 527 VGLAFDEWDLEYYTDIFR--NKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVL 584
+GLA +E ++EY + L R+PT VE F AQ NSEH RH F S ++ +
Sbjct: 189 MGLALEESEIEYLAAAYGPDGPLARDPTDVELFMFAQVNSEHCRHKQFNASWTIDGMEMP 248
Query: 585 N 585
N
Sbjct: 249 N 249
Score = 71 (30.1 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 27/81 (33%), Positives = 36/81 (44%)
Query: 210 PIRYVDDNN-KITEDYPMNPNGSP-GKRERKKKTGRYLGKYGHG--AVQKG----MPFKD 261
P+++VD+ K T YP NPNGSP G + GR + H V G +P K
Sbjct: 1280 PVQWVDNATLKPTMKYPFNPNGSPEGIAGIRNANGRVMAIMPHPERTVMNGIASWLPAKA 1339
Query: 262 YH----GKTGRVFNVTQHAVG 278
G GR+F + VG
Sbjct: 1340 EEWGDIGPWGRIFFSARRWVG 1360
Score = 46 (21.3 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 581 EPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIG 624
E + NE+LG +F + R +E++ A C L+ +IG
Sbjct: 965 ETLFNEELGAVFQV--RKEHEMQFRSCFATCGPPA--GLIHKIG 1004
Score = 38 (18.4 bits), Expect = 4.7e-26, Sum P(3) = 4.7e-26
Identities = 16/53 (30%), Positives = 25/53 (47%)
Query: 458 YDRMTECVYSS-P---LTSFNHGIKPDPWFYVDVMGKGKV---ALQEVNQKLG 503
+DRMT+ + + P L H P P + + G K LQE N+++G
Sbjct: 140 HDRMTQLISETEPDLHLMFSEHS--PLPLETIPLSGSDKSPKEVLQEANKRMG 190
>CGD|CAL0001264 [details] [associations]
symbol:ADE6 species:5476 "Candida albicans" [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006164 "purine nucleotide
biosynthetic process" evidence=IEA] InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 Pfam:PF00586 CGD:CAL0001264
GO:GO:0006189 InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 EMBL:AACQ01000214
EMBL:AACQ01000213 eggNOG:COG0046 KO:K01952 GO:GO:0004642
TIGRFAMs:TIGR01735 RefSeq:XP_711102.1 RefSeq:XP_711119.1
ProteinModelPortal:Q59MZ5 STRING:Q59MZ5 GeneID:3647292
GeneID:3647304 KEGG:cal:CaO19.13694 KEGG:cal:CaO19.6317
Uniprot:Q59MZ5
Length = 1370
Score = 277 (102.6 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 61/154 (39%), Positives = 89/154 (57%)
Query: 627 YQYQPVRDDIVGATLG----KKVTRIGPKYQ--YQPVRDDIVGATLGKKVISIAVLREEG 680
Y Q +RD+ + +T K G YQ YQP + K +A+LRE+G
Sbjct: 1059 YHIQKLRDNPITSTQEYDAIKDDNDPGISYQLTYQPNEFKKYSSQQPK----VAILREQG 1114
Query: 681 INGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAAS 740
+N +EM+ Q GF+V+D+T+ D+LE + TLD F G+ GGFSY D LG+ GWA S
Sbjct: 1115 VNSQQEMAWCFQQAGFDVYDVTMSDILEGRTTLDDFVGIAACGGFSYGDVLGAGAGWAKS 1174
Query: 741 LLLNEGIKTQLNKFIA-RSDTFSFGVCNGCQLMN 773
+L ++ + + KF R+DTF+FG CNGCQ ++
Sbjct: 1175 VLFHDKARQEFKKFFQDRNDTFAFGACNGCQFLS 1208
Score = 186 (70.5 bits), Expect = 6.4e-34, Sum P(2) = 6.4e-34
Identities = 43/108 (39%), Positives = 62/108 (57%)
Query: 67 TPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALV 126
T N+ V ++++ V++L +VGSK FL DR +TGL+ + Q VGP P+ADV V A
Sbjct: 686 TNNNLDVSESIDRVLQLPAVGSKNFLITIGDRFITGLVDRDQMVGPWQVPVADVGVTATS 745
Query: 127 HNDL---RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDL 171
D G A ++GE+P L+ A+M VAE+L N+ A I L
Sbjct: 746 LGDTILSTGEAMAMGEKPTLALISASASAKMCVAESLLNIFAADIPSL 793
Score = 142 (55.0 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 55/198 (27%), Positives = 87/198 (43%)
Query: 513 IVQRTKLCIVQRHEVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFF 572
I+ ++ I E+GLA D+ +++Y + F+ + RNPT VE F AQ NSEH RH F
Sbjct: 217 IISDSENLIKANKELGLALDQGEIDYLINAFKEIIGRNPTDVELFMFAQVNSEHCRHKIF 276
Query: 573 KISVAVNNEPVLNEDLGTLFLI---WERT-SYELEKLQMNARCADEEYNSLVTRIGPKYQ 628
++ ++L +I E+T Y + NA + + T Q
Sbjct: 277 NADWTIDGT---TKELSLFKMIKNTHEKTPQYTISAYSDNAAVFEGHEGYVWTPDFKTKQ 333
Query: 629 YQPVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMS 688
++ +++ + TL K T P P GA G S +R+EG G R
Sbjct: 334 WKSIKEKV--QTLVKVETHNHPT-AVSP----FAGAATG----SGGEIRDEGAVG-RGSK 381
Query: 689 AMAQVCGFEVWDITVQDL 706
+ A + GF V D+ + L
Sbjct: 382 SKAGLSGFSVADLNIPTL 399
Score = 100 (40.3 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 32/81 (39%), Positives = 38/81 (46%)
Query: 171 LKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNG 230
LK + S I + H GR FK + + D Q I YVD+ KITE+YP NPNG
Sbjct: 1252 LKNMKGSKLPIAVAHGE--GRAQFK--ALQEQKD-FQLDVIHYVDNYGKITENYPFNPNG 1306
Query: 231 SP-GKRERKKKTGRYLGKYGH 250
SP G GR L H
Sbjct: 1307 SPNGIAGITNSNGRVLAMMPH 1327
Score = 88 (36.0 bits), Expect = 6.8e-14, Sum P(2) = 6.8e-14
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 574 ISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQ 630
I ++ N P+ + G L +W TSY ++KL+ N + +EY+++ P YQ
Sbjct: 1033 IDISFNGTPIYSSTRGHLQQLWSNTSYHIQKLRDNPITSTQEYDAIKDDNDPGISYQ 1089
Score = 62 (26.9 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 444 NSNSLVFFQCAESFYDRMTECVY-SSPLTSFNHGI---KPDPWFYVDVMGKGKVALQEVN 499
NSNS+ S +DRMT+ +Y + + +N P P +D++ + L + N
Sbjct: 170 NSNSIPIETLLTSVFDRMTQSIYFGNNVPQYNDLFAHHSPKPLVTIDIISDSE-NLIKAN 228
Query: 500 QKLG 503
++LG
Sbjct: 229 KELG 232
Score = 43 (20.2 bits), Expect = 5.7e-19, Sum P(2) = 5.7e-19
Identities = 11/47 (23%), Positives = 22/47 (46%)
Query: 404 SFYDRMTECVY-SSPLTSFNHGI---KPDPWFYVDVMGKGKVAFNSN 446
S +DRMT+ +Y + + +N P P +D++ + +N
Sbjct: 182 SVFDRMTQSIYFGNNVPQYNDLFAHHSPKPLVTIDIISDSENLIKAN 228
Score = 41 (19.5 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 19/90 (21%), Positives = 42/90 (46%)
Query: 583 VLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRD------DI 636
+ NE+LG +F I + + +++ ++ DE + ++ + PK+ + + D I
Sbjct: 986 LFNEELGAVFQIKFKDYTKFQQIFLD-NGIDENFIQIIGK--PKFDSKQLIDISFNGTPI 1042
Query: 637 VGATLGK-KVTRIGPKYQYQPVRDDIVGAT 665
+T G + Y Q +RD+ + +T
Sbjct: 1043 YSSTRGHLQQLWSNTSYHIQKLRDNPITST 1072
>UNIPROTKB|Q9KTN2 [details] [associations]
symbol:purL "Phosphoribosylformylglycinamidine synthase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_00419 InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 InterPro:IPR022940
Pfam:PF00586 UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 GO:GO:0009152 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0046
KO:K01952 OMA:TVKAVGM GO:GO:0004642 TIGRFAMs:TIGR01735
ProtClustDB:PRK05297 PIR:A82272 RefSeq:NP_230516.1
ProteinModelPortal:Q9KTN2 PRIDE:Q9KTN2 DNASU:2614536 GeneID:2614536
KEGG:vch:VC0869 PATRIC:20080842 Uniprot:Q9KTN2
Length = 1297
Score = 272 (100.8 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 54/129 (41%), Positives = 78/129 (60%)
Query: 648 IGPKYQYQPVRDDIVGATLGKKVI-SIAVLREEGINGDREMSAMAQVCGFEVWDITVQDL 706
+ K Y V+ D+ + K V +A+LRE+G+N EM+A GF+ D+ + D+
Sbjct: 1019 LNAKLTYD-VQADVAAPYIAKGVRPKMAILREQGVNSHVEMAAAFDRAGFDAVDVHMSDI 1077
Query: 707 LENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVC 766
L + LD ++GLV GGFSY D LG+ +GWA S+L N + Q +F R DTFS GVC
Sbjct: 1078 LTGQTVLDAYQGLVACGGFSYGDVLGAGEGWAKSILFNAQAREQFEQFFQRKDTFSLGVC 1137
Query: 767 NGCQLMNLL 775
NGCQ+++ L
Sbjct: 1138 NGCQMLSNL 1146
Score = 189 (71.6 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 43/102 (42%), Positives = 61/102 (59%)
Query: 71 ISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDL 130
I + +A++ V+RL +V K FL DR VTGL+A+ Q VGP P+A+ AV A +
Sbjct: 631 IELNEAVDRVLRLPAVAEKTFLITIGDRSVTGLVARDQMVGPWQVPVANCAVTAASFDSY 690
Query: 131 RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
G A S+GE+ L+D AR+AV EA+TN+ I +LK
Sbjct: 691 HGEAMSMGERTPVALLDFGASARLAVGEAITNIAATDIGELK 732
Score = 101 (40.6 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 527 VGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNE 586
+GLA E +++Y + F KL RNP +E AQ+NSEH RH F ++ + +
Sbjct: 178 LGLALAEDEIDYLVESF-TKLGRNPNDIELMMFAQANSEHCRHKIFNADWTIDG---VKQ 233
Query: 587 DLGTLFLI---WERT-SYELEKLQMNA 609
D +I +E+T Y L + NA
Sbjct: 234 DKSLFKMIKNTFEQTPDYVLSAYKDNA 260
Score = 80 (33.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 158 EALTNLVFAKISDLKFL--FASSRS-IHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYV 214
EA +LV + S F A SR I + H GR ++ +++S + IR+V
Sbjct: 1168 EARFSLVEVQKSPSLFFSEMAGSRMPIAVSHGE--GRVEVRDAQHLAAIEQSGTVAIRFV 1225
Query: 215 DDNNKITEDYPMNPNGSP 232
D+ + T+ YP NPNGSP
Sbjct: 1226 DNFGQPTQAYPSNPNGSP 1243
Score = 67 (28.6 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 458 YDRMTECVYSSPLTSFNHGI---KPDPWFYVDVMGKGKVALQEVNQKLG 503
+DRM E V++ LT +P P VDV+ G+ AL+E N LG
Sbjct: 132 HDRMMEVVFAE-LTDAQQLFSVAEPAPMSQVDVLAGGRRALEEANVSLG 179
Score = 63 (27.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 573 KISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGP----KYQ 628
++ + E ++ L IW +++++ L+ N+ CAD+E+ + P K
Sbjct: 965 RLLITCGEEVLIERSRTELRTIWAEMTHKMQALRDNSACADQEFAAKQDNRDPGLNAKLT 1024
Query: 629 YQPVRDDIVGATLGKKV 645
Y V+ D+ + K V
Sbjct: 1025 YD-VQADVAAPYIAKGV 1040
Score = 43 (20.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 24/80 (30%), Positives = 34/80 (42%)
Query: 101 TGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAAT--SIGEQPIKGLVDPKRGARMAVAE 158
T L A Q + L L D ++ +V +L A S+ E VD G R A+ E
Sbjct: 117 TALTAAQ--IATLEALLHD-RMMEVVFAELTDAQQLFSVAEPAPMSQVDVLAGGRRALEE 173
Query: 159 ALTNLVFAKISD-LKFLFAS 177
A +L A D + +L S
Sbjct: 174 ANVSLGLALAEDEIDYLVES 193
>TIGR_CMR|VC_0869 [details] [associations]
symbol:VC_0869 "phosphoribosylformylglycinamidine synthase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] HAMAP:MF_00419 InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 InterPro:IPR022940 Pfam:PF00586
UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 GO:GO:0009152 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0046
KO:K01952 OMA:TVKAVGM GO:GO:0004642 TIGRFAMs:TIGR01735
ProtClustDB:PRK05297 PIR:A82272 RefSeq:NP_230516.1
ProteinModelPortal:Q9KTN2 PRIDE:Q9KTN2 DNASU:2614536 GeneID:2614536
KEGG:vch:VC0869 PATRIC:20080842 Uniprot:Q9KTN2
Length = 1297
Score = 272 (100.8 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 54/129 (41%), Positives = 78/129 (60%)
Query: 648 IGPKYQYQPVRDDIVGATLGKKVI-SIAVLREEGINGDREMSAMAQVCGFEVWDITVQDL 706
+ K Y V+ D+ + K V +A+LRE+G+N EM+A GF+ D+ + D+
Sbjct: 1019 LNAKLTYD-VQADVAAPYIAKGVRPKMAILREQGVNSHVEMAAAFDRAGFDAVDVHMSDI 1077
Query: 707 LENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVC 766
L + LD ++GLV GGFSY D LG+ +GWA S+L N + Q +F R DTFS GVC
Sbjct: 1078 LTGQTVLDAYQGLVACGGFSYGDVLGAGEGWAKSILFNAQAREQFEQFFQRKDTFSLGVC 1137
Query: 767 NGCQLMNLL 775
NGCQ+++ L
Sbjct: 1138 NGCQMLSNL 1146
Score = 189 (71.6 bits), Expect = 9.2e-34, Sum P(2) = 9.2e-34
Identities = 43/102 (42%), Positives = 61/102 (59%)
Query: 71 ISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDL 130
I + +A++ V+RL +V K FL DR VTGL+A+ Q VGP P+A+ AV A +
Sbjct: 631 IELNEAVDRVLRLPAVAEKTFLITIGDRSVTGLVARDQMVGPWQVPVANCAVTAASFDSY 690
Query: 131 RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
G A S+GE+ L+D AR+AV EA+TN+ I +LK
Sbjct: 691 HGEAMSMGERTPVALLDFGASARLAVGEAITNIAATDIGELK 732
Score = 101 (40.6 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 527 VGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNE 586
+GLA E +++Y + F KL RNP +E AQ+NSEH RH F ++ + +
Sbjct: 178 LGLALAEDEIDYLVESF-TKLGRNPNDIELMMFAQANSEHCRHKIFNADWTIDG---VKQ 233
Query: 587 DLGTLFLI---WERT-SYELEKLQMNA 609
D +I +E+T Y L + NA
Sbjct: 234 DKSLFKMIKNTFEQTPDYVLSAYKDNA 260
Score = 80 (33.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 158 EALTNLVFAKISDLKFL--FASSRS-IHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYV 214
EA +LV + S F A SR I + H GR ++ +++S + IR+V
Sbjct: 1168 EARFSLVEVQKSPSLFFSEMAGSRMPIAVSHGE--GRVEVRDAQHLAAIEQSGTVAIRFV 1225
Query: 215 DDNNKITEDYPMNPNGSP 232
D+ + T+ YP NPNGSP
Sbjct: 1226 DNFGQPTQAYPSNPNGSP 1243
Score = 67 (28.6 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 458 YDRMTECVYSSPLTSFNHGI---KPDPWFYVDVMGKGKVALQEVNQKLG 503
+DRM E V++ LT +P P VDV+ G+ AL+E N LG
Sbjct: 132 HDRMMEVVFAE-LTDAQQLFSVAEPAPMSQVDVLAGGRRALEEANVSLG 179
Score = 63 (27.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 573 KISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGP----KYQ 628
++ + E ++ L IW +++++ L+ N+ CAD+E+ + P K
Sbjct: 965 RLLITCGEEVLIERSRTELRTIWAEMTHKMQALRDNSACADQEFAAKQDNRDPGLNAKLT 1024
Query: 629 YQPVRDDIVGATLGKKV 645
Y V+ D+ + K V
Sbjct: 1025 YD-VQADVAAPYIAKGV 1040
Score = 43 (20.2 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 24/80 (30%), Positives = 34/80 (42%)
Query: 101 TGLIAQQQCVGPLHTPLADVAVVALVHNDLRGAAT--SIGEQPIKGLVDPKRGARMAVAE 158
T L A Q + L L D ++ +V +L A S+ E VD G R A+ E
Sbjct: 117 TALTAAQ--IATLEALLHD-RMMEVVFAELTDAQQLFSVAEPAPMSQVDVLAGGRRALEE 173
Query: 159 ALTNLVFAKISD-LKFLFAS 177
A +L A D + +L S
Sbjct: 174 ANVSLGLALAEDEIDYLVES 193
>TIGR_CMR|CPS_3675 [details] [associations]
symbol:CPS_3675 "phosphoribosylformylglycinamidine
synthase" species:167879 "Colwellia psychrerythraea 34H"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_00419 InterPro:IPR000728
InterPro:IPR010073 InterPro:IPR016188 InterPro:IPR022940
Pfam:PF00586 UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0046 KO:K01952
GO:GO:0004642 TIGRFAMs:TIGR01735 RefSeq:YP_270343.1 HSSP:Q9X0X3
ProteinModelPortal:Q47XX7 STRING:Q47XX7 PRIDE:Q47XX7 GeneID:3519702
KEGG:cps:CPS_3675 PATRIC:21470275 HOGENOM:HOG000261359
ProtClustDB:PRK05297 BioCyc:CPSY167879:GI48-3697-MONOMER
Uniprot:Q47XX7
Length = 1320
Score = 288 (106.4 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 75/224 (33%), Positives = 115/224 (51%)
Query: 556 CFDLAQSNSEHSRHWFFKISVAVNNEPVLNEDLGTLF-LIWERTSYELEKLQMNARCADE 614
C D+ + N+E + I + + E VL E+ T + +W +T+Y ++ L+ N CA +
Sbjct: 965 CTDIGRLNNEDT------IRFSRDGEVVL-ENSRTYYRTVWAQTTYRMQSLRDNPECAQQ 1017
Query: 615 EYNSLVTRIGPKYQYQ---PVRDDIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVI 671
E++ P + + +DIV A L + R K + +DI
Sbjct: 1018 EHDVKFDTEDPGLNTELTFDINEDIV-ADL---IIRDAVK-DAENSANDITNPR------ 1066
Query: 672 SIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADAL 731
+A+LRE+G+N EM+A GF D+ + D+L + L F GLV GGFSY D L
Sbjct: 1067 -VAILREQGVNSHVEMAAAFDRAGFVAIDVHMSDILSGRADLADFNGLVACGGFSYGDVL 1125
Query: 732 GSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLL 775
G+ +GWA S+L N +T F R DTF+ GVCNGCQ+++ L
Sbjct: 1126 GAGEGWAKSILFNANARTMFKTFFEREDTFTLGVCNGCQMLSNL 1169
Score = 169 (64.5 bits), Expect = 2.2e-33, Sum P(2) = 2.2e-33
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 71 ISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDL 130
+++ A + ++ L +V K FL DR VTG++ + Q VGP P+AD V A +
Sbjct: 639 VTLADAADRILSLPTVAEKTFLITIGDRSVTGMVNRDQMVGPWQVPVADCGVTASALDSY 698
Query: 131 RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDL 171
G A S+GE+ L++ AR+AVAE+LTN+ I DL
Sbjct: 699 HGEAMSLGERTPVALLNFGASARLAVAESLTNIAGTDIGDL 739
Score = 104 (41.7 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 518 KLCIVQRH-EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFF 572
K +VQ + E+GLA E ++ Y + F KL RNP +E + AQ+NSEH RH F
Sbjct: 171 KNALVQANIELGLALAEDEVNYLFENF-TKLGRNPHDIELYMFAQANSEHCRHKIF 225
Score = 82 (33.9 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGS 231
G F + D + S + +RYV++ +TE YP NPNGS
Sbjct: 1224 GHAEFSSDAAIDAANNSGTVSMRYVNNYGDVTETYPANPNGS 1265
Score = 49 (22.3 bits), Expect = 7.9e-21, Sum P(2) = 7.9e-21
Identities = 13/48 (27%), Positives = 25/48 (52%)
Query: 458 YDRMTECVYS--SPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
+DRM E +++ + ++ +P +D+ GK AL + N +LG
Sbjct: 135 HDRMMESIFNDFAQASTLFASSEPGELTAIDIESGGKNALVQANIELG 182
Score = 47 (21.6 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 418 LTSFNHGIKPDPWFYVDVMGKGK-----VAFNSNSLVFFQCAESFYDR 460
L FN + + Y DV+G G+ + FN+N+ F+ +F++R
Sbjct: 1107 LADFNGLVACGGFSYGDVLGAGEGWAKSILFNANARTMFK---TFFER 1151
Score = 38 (18.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 17/82 (20%), Positives = 38/82 (46%)
Query: 154 MAVAEALTNLVFAKIS-------DLK-FLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDR 205
+A+AE N +F + D++ ++FA + S H H F+ + D + +
Sbjct: 183 LALAEDEVNYLFENFTKLGRNPHDIELYMFAQANSEHCRHKIFNAEWTI------DGVKQ 236
Query: 206 SQCLPIRYVDDNNKITEDYPMN 227
+ L + + + ++I DY ++
Sbjct: 237 EKSL-FKMIRNTHEINPDYVLS 257
Score = 37 (18.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 134 ATSIGEQPIKGLV 146
AT IG +P GLV
Sbjct: 324 ATGIGSKPKAGLV 336
>TIGR_CMR|CBU_0631 [details] [associations]
symbol:CBU_0631 "phosphoribosylformylglycinamidine
synthase" species:227377 "Coxiella burnetii RSA 493" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 UniPathway:UPA00074 GO:GO:0005524
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 HOGENOM:HOG000261359 ProtClustDB:PRK05297
RefSeq:NP_819661.2 ProteinModelPortal:Q83DR5 PRIDE:Q83DR5
GeneID:1208516 KEGG:cbu:CBU_0631 PATRIC:17929943
BioCyc:CBUR227377:GJ7S-629-MONOMER Uniprot:Q83DR5
Length = 1324
Score = 261 (96.9 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 55/135 (40%), Positives = 77/135 (57%)
Query: 641 LGKKVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWD 700
L KK T + K + D + K +A+LRE+G NG REM+A + GFE D
Sbjct: 1041 LDKKDTGLFTKITFDNNEDIALPYINSGKRPRVAILREQGTNGHREMAAAFHLAGFESVD 1100
Query: 701 ITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDT 760
+ + DLL ++ L FKG V GGFSY D LG+ +GWA +L++ I+ + + F D
Sbjct: 1101 VHMSDLLNERVNLMDFKGAVAGGGFSYGDVLGAGRGWAQVILMHPKIRDKFSLFFESKDR 1160
Query: 761 FSFGVCNGCQLMNLL 775
F+ GVCNGCQL + L
Sbjct: 1161 FALGVCNGCQLFSHL 1175
Score = 173 (66.0 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 43/115 (37%), Positives = 60/115 (52%)
Query: 64 TAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVV 123
TA I+ A+ V++ V K FL DR V G++A+ Q VGP P+ADVAV
Sbjct: 657 TAWNISKINWADAVKRVLQYPCVADKSFLITIGDRTVGGMVARDQMVGPWQIPVADVAVT 716
Query: 124 ALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLKFLFASS 178
A G A ++GE+ +V P ARMAV EA+TN+ A I + + S+
Sbjct: 717 AHSFTGYEGQALAMGERSPIAIVHPAASARMAVGEAITNIAAAPIKAISDIVLSA 771
Score = 112 (44.5 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 52/185 (28%), Positives = 78/185 (42%)
Query: 527 VGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLNE 586
+GLA + D+ Y F ++L RNPT +E AQ NSEH RH F ++ + E
Sbjct: 206 LGLALSDPDIHYLLRAF-HQLNRNPTDIELMMFAQVNSEHCRHKIFNAQWTIDGKEK-KE 263
Query: 587 DLGTLFLIWERTSYE--LEKLQMNARCADEEYNSLVTRIGPK-YQYQPVRDDIVGATLGK 643
L + +T E L + NA E +N I P + Y+ + + T+ K
Sbjct: 264 SLFDMIRYTYKTHPEKILVAYKDNAAVI-EGFNCESFLINPSNHSYEKQKGRL--HTVLK 320
Query: 644 KVTRIGPKYQYQPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITV 703
T P P GA G S +R+E G R ++A + GF V + +
Sbjct: 321 VETHNHPT-AIAP----FAGAATG----SGGEIRDEAATG-RGAQSLAGLAGFSVSHLRI 370
Query: 704 QDLLE 708
D L+
Sbjct: 371 PDFLQ 375
Score = 80 (33.2 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSP 232
GR F+ + + + + +RYV+ + TE+YP NPNGSP
Sbjct: 1230 GRVVFEKNT--QEFENEKLIALRYVNYAGQPTENYPANPNGSP 1270
Score = 72 (30.4 bits), Expect = 3.0e-33, Sum P(3) = 3.0e-33
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 581 EPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTR 622
+ + E TL W TSY L+ L+ N CA ++Y+ L+ +
Sbjct: 1002 QTLYQETRTTLQRWWSETSYRLQSLRDNPECAKQQYDGLLDK 1043
Score = 68 (29.0 bits), Expect = 2.1e-22, Sum P(3) = 2.1e-22
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 454 AESFYDRMTECVY--SSPLTS-FNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
A YD +TE + + L F H P + + V+GKG+ AL+E +Q LG
Sbjct: 156 ASELYDPLTESLLFDAEDLAQLFQHPA-PKTFNDIPVLGKGEAALKEADQNLG 207
Score = 44 (20.5 bits), Expect = 6.3e-20, Sum P(3) = 6.3e-20
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 111 GPLHTPLADVAVVALVHNDLRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISD 170
G L L ++A A H + S+G+ + + + + GA + V E ++VF +
Sbjct: 919 GGLLATLCEMAFTA--HVGITIKLDSLGDDALASVFNEELGAVIQVKEKNIDIVFEILKS 976
Query: 171 LKFLFASSRSIHIFHYSFSGRFAFKNHGIY 200
K L A S I + F F+ +Y
Sbjct: 977 HK-LQAHSHVIGELNQLDEIIFNFRGQTLY 1005
>TIGR_CMR|SO_3287 [details] [associations]
symbol:SO_3287 "phosphoribosylformylglycinamidine synthase"
species:211586 "Shewanella oneidensis MR-1" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] HAMAP:MF_00419 InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 InterPro:IPR022940 Pfam:PF00586
UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 eggNOG:COG0046 KO:K01952
OMA:TVKAVGM GO:GO:0004642 TIGRFAMs:TIGR01735 HOGENOM:HOG000261359
ProtClustDB:PRK05297 RefSeq:NP_718841.1 ProteinModelPortal:Q8EC57
GeneID:1170977 KEGG:son:SO_3287 PATRIC:23526258 Uniprot:Q8EC57
Length = 1293
Score = 270 (100.1 bits), Expect = 3.9e-33, Sum P(3) = 3.9e-33
Identities = 58/155 (37%), Positives = 88/155 (56%)
Query: 627 YQYQPVRDDIVGAT----LGKKVTRIG--PKYQYQPVRDDIVGATLGKKVISIAVLREEG 680
Y+ Q +RD+ A L + T +G + P D L +A+LRE+G
Sbjct: 988 YRMQAMRDNPACALEEFKLKQDETDLGLTVNLSFDPSEDVAAPYILKGAAPKMAILREQG 1047
Query: 681 INGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAAS 740
+N EM+A GFE D+ + D+L +I+L+ F+GLV GGFSY D LG+ +GWA S
Sbjct: 1048 VNSHVEMAAAFDRAGFESRDVHMSDILSGRISLEEFQGLVACGGFSYGDVLGAGEGWAKS 1107
Query: 741 LLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLL 775
+L NE + + ++F R +F+ GVCNGCQ+++ L
Sbjct: 1108 ILFNERARNEFSRFFERDSSFALGVCNGCQMLSNL 1142
Score = 177 (67.4 bits), Expect = 3.9e-33, Sum P(3) = 3.9e-33
Identities = 43/102 (42%), Positives = 56/102 (54%)
Query: 71 ISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDL 130
I V A+ V+ L +V K FL DR VTGL+ + Q VGP P+AD AV A +
Sbjct: 629 IDVKDAVKRVLSLPTVADKTFLITIGDRTVTGLVNRDQMVGPWQVPVADCAVTAASFDTY 688
Query: 131 RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
G A S+GE+ L+D ARMAVAE++ N+ A I K
Sbjct: 689 AGEAMSLGERTPLALLDFGASARMAVAESIMNIAGADIGSFK 730
Score = 101 (40.6 bits), Expect = 3.7e-26, Sum P(4) = 3.7e-26
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNE 581
E+GLA E +++Y + F +L RNP +E AQ+NSEH RH F ++ +
Sbjct: 176 EMGLALAEDEIDYLVENFV-RLNRNPNDIELMMFAQANSEHCRHKIFNADWTIDGK 230
Score = 71 (30.1 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 204 DRSQCLPIRYVDDNNKITEDYPMNPNGSP 232
+ S + +R+V+ +I YP NPNGSP
Sbjct: 1211 EASGTIALRFVNGKGEIATQYPQNPNGSP 1239
Score = 57 (25.1 bits), Expect = 3.9e-33, Sum P(3) = 3.9e-33
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 574 ISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEY 616
I++ + ++ L +W T+Y ++ ++ N CA EE+
Sbjct: 962 ITIKDGAREIFSDTRVALRTVWSETTYRMQAMRDNPACALEEF 1004
Score = 53 (23.7 bits), Expect = 3.7e-26, Sum P(4) = 3.7e-26
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 458 YDRMTECV---YSSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
+DRM E V ++ F +P P+ V+V+ +G+ AL+ N ++G
Sbjct: 131 HDRMVEVVLNDFAKADVLFKR-TEPAPFKSVNVLAEGRRALEVANVEMG 178
>POMBASE|SPAC6F12.10c [details] [associations]
symbol:ade3 "phosphoribosylformylglycinamidine synthase
Ade3 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006189 "'de novo' IMP biosynthetic process"
evidence=ISO] [GO:0006541 "glutamine metabolic process"
evidence=IEA] InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 UniPathway:UPA00074
PomBase:SPAC6F12.10c GO:GO:0005524 GO:GO:0005794 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 KO:K01952 OMA:TVKAVGM GO:GO:0004642
TIGRFAMs:TIGR01735 HOGENOM:HOG000261359 EMBL:AB027799 PIR:T11661
RefSeq:NP_593296.1 ProteinModelPortal:O14228 STRING:O14228
PRIDE:O14228 EnsemblFungi:SPAC6F12.10c.1 GeneID:2542871
KEGG:spo:SPAC6F12.10c OrthoDB:EOG4V72QQ NextBio:20803911
Uniprot:O14228
Length = 1323
Score = 255 (94.8 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 57/155 (36%), Positives = 80/155 (51%)
Query: 627 YQYQPVRD--DIVGATLGKKVTRIGPKYQYQPVRDDIVGATLGKKVIS---IAVLREEGI 681
Y+ Q +RD + + P Y D V T + S +A+LRE+G+
Sbjct: 1011 YKMQEIRDNPECARQEMENIADNNDPGLGYHLTFDPNVSVTADLALTSRPKVAILREQGV 1070
Query: 682 NGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASL 741
NG EM+ GF D+ + D+L ++ LD F G+ GGFSY D LGS GWA S+
Sbjct: 1071 NGYLEMAYAFYASGFTAVDVHMTDILSGRVHLDDFVGIAACGGFSYGDVLGSGNGWATSI 1130
Query: 742 LLNEGIKTQLNKFI-ARSDTFSFGVCNGCQLMNLL 775
LL+E + + +F R DTF G+CNGCQL + L
Sbjct: 1131 LLHEDARNEFYRFFNERKDTFGLGICNGCQLFSRL 1165
Score = 199 (75.1 bits), Expect = 6.1e-33, Sum P(2) = 6.1e-33
Identities = 48/106 (45%), Positives = 61/106 (57%)
Query: 68 PPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVH 127
P + +L A+ V+R+ +V SK FL DR VTGLIA+ Q VGP P+ADV V +
Sbjct: 641 PSSDPILDAVERVLRMPAVASKSFLITIGDRSVTGLIARDQMVGPWQVPVADVGVTVTSY 700
Query: 128 ND--LRGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDL 171
G A ++GE+PI LV ARMAVAE + NLV A I L
Sbjct: 701 GKGINTGEALAMGEKPISALVSAAASARMAVAECIMNLVAASIPAL 746
Score = 78 (32.5 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSPGKRER-KKKTGRYLGKY 248
GR F + Y+ + I YV++ N+ T YP NPNGS + GR+L
Sbjct: 1223 GRAVFDSESDYEQFKKEGLDLIYYVNNYNERTSRYPFNPNGSRDAIAGVRSPCGRFLAMM 1282
Query: 249 GH 250
H
Sbjct: 1283 PH 1284
Score = 74 (31.1 bits), Expect = 7.3e-14, Sum P(2) = 7.3e-14
Identities = 18/73 (24%), Positives = 32/73 (43%)
Query: 574 ISVAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVR 633
IS + + + + L IW TSY++++++ N CA +E ++ P Y
Sbjct: 985 ISFSRSGKIIFKSTRSKLHGIWHETSYKMQEIRDNPECARQEMENIADNNDPGLGYHLTF 1044
Query: 634 DDIVGATLGKKVT 646
D V T +T
Sbjct: 1045 DPNVSVTADLALT 1057
Score = 44 (20.5 bits), Expect = 9.5e-17, Sum P(2) = 9.5e-17
Identities = 25/103 (24%), Positives = 43/103 (41%)
Query: 304 KTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKG 363
K LA + V+D L+ Y++ ++ +G P++IA+ L M+ G +N
Sbjct: 334 KAGLAGYSVSD--LNIPGYKQPWELDVGKPYHIATS--LDIMLEAPIGSSAFNNEFGRPC 389
Query: 364 YRRGTRDLFSRPFRRHGTIPLSVYMK-VYKVGDIVDIKCAESF 405
R R GT+ + Y K + G I I+ +F
Sbjct: 390 INGYFRTFCMEVPRGDGTLEIRGYHKPIMAAGGIGRIRKQHAF 432
Score = 39 (18.8 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 387 YMKVYKVGDIVD--IKCA-ESFYDRMTECV 413
Y V+K DI + +K A YDRMTE +
Sbjct: 107 YSVVFK-DDISEEMLKSALNHLYDRMTEAL 135
>UNIPROTKB|P15254 [details] [associations]
symbol:purL species:83333 "Escherichia coli K-12"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=IEA;IDA;IMP] [GO:0006189 "'de novo' IMP biosynthetic
process" evidence=IEA;IC] [GO:0006541 "glutamine metabolic process"
evidence=IEA;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005524
"ATP binding" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006164 "purine nucleotide biosynthetic process"
evidence=IEA] HAMAP:MF_00419 InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 InterPro:IPR022940 Pfam:PF00586
UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
EMBL:U36841 GO:GO:0006189 GO:GO:0006541 GO:GO:0042623
InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918 Pfam:PF02769
SUPFAM:SSF56042 SUPFAM:SSF55326 EMBL:M19501 eggNOG:COG0046
KO:K01952 OMA:TVKAVGM GO:GO:0004642 TIGRFAMs:TIGR01735
HOGENOM:HOG000261359 ProtClustDB:PRK05297 PIR:D65033
RefSeq:YP_026170.1 RefSeq:YP_490785.1 ProteinModelPortal:P15254
SMR:P15254 DIP:DIP-10614N IntAct:P15254 MINT:MINT-1262623
PaxDb:P15254 PRIDE:P15254 EnsemblBacteria:EBESCT00000004053
EnsemblBacteria:EBESCT00000015234 GeneID:12930212 GeneID:947032
KEGG:ecj:Y75_p2510 KEGG:eco:b2557 PATRIC:32120513 EchoBASE:EB0790
EcoGene:EG10797 BioCyc:EcoCyc:FGAMSYN-MONOMER
BioCyc:ECOL316407:JW2541-MONOMER BioCyc:MetaCyc:FGAMSYN-MONOMER
Genevestigator:P15254 Uniprot:P15254
Length = 1295
Score = 244 (91.0 bits), Expect = 7.7e-33, Sum P(4) = 7.7e-33
Identities = 46/103 (44%), Positives = 65/103 (63%)
Query: 673 IAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALG 732
+AVLRE+G+N EM+A GF+ D+ + DLL + L+ F LV GGFSY D LG
Sbjct: 1042 VAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHALVACGGFSYGDVLG 1101
Query: 733 SAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLL 775
+ +GWA S+L N+ ++ + F R T + GVCNGCQ+M+ L
Sbjct: 1102 AGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNL 1144
Score = 184 (69.8 bits), Expect = 7.7e-33, Sum P(4) = 7.7e-33
Identities = 41/102 (40%), Positives = 59/102 (57%)
Query: 71 ISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDL 130
I++ A+ V+ L +V K FL DR VTG++A+ Q VGP P+A+ AV +
Sbjct: 631 ITIADAVKRVLHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAVTTASLDSY 690
Query: 131 RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
G A +IGE+ L+D AR+AV EALTN+ +I D+K
Sbjct: 691 YGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIK 732
Score = 112 (44.5 bits), Expect = 2.5e-28, Sum P(5) = 2.5e-28
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 527 VGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNE 581
+GLA E +++Y D F KL RNP +E + AQ+NSEH RH F ++ E
Sbjct: 178 LGLALAEDEIDYLQDAF-TKLGRNPNDIELYMFAQANSEHCRHKIFNADWVIDGE 231
Score = 93 (37.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 171 LKFLFASSRSIHIFHYSFSGRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNG 230
L+ + S I + H GR ++ L+ + +RYVD+ K+TE YP NPNG
Sbjct: 1182 LQGMVGSQMPIAVSHGE--GRVEVRDAAHLAALESKGLVALRYVDNFGKVTETYPANPNG 1239
Query: 231 SP 232
SP
Sbjct: 1240 SP 1241
Score = 82 (33.9 bits), Expect = 7.7e-33, Sum P(4) = 7.7e-33
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 576 VAVNNEPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNS 618
+ N + V +E TL + W T++++++L+ N CAD+E+ +
Sbjct: 966 ITANGQTVFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQA 1008
Score = 68 (29.0 bits), Expect = 2.5e-28, Sum P(5) = 2.5e-28
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 452 QCAESFYDRMTECVY---SSPLTSFNHGIKPDPWFYVDVMGKGKVALQEVNQKLG 503
Q +DRM E V+ F H +P P VD++G+G+ AL + N +LG
Sbjct: 126 QVTAELHDRMMETVFFALDDAEQLFAHH-QPTPVTSVDLLGQGRQALIDANLRLG 179
Score = 49 (22.3 bits), Expect = 2.9e-19, Sum P(4) = 2.9e-19
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 406 YDRMTECVY---SSPLTSFNHGIKPDPWFYVDVMGKGKVAF-NSNSLVFFQCAESFYDRM 461
+DRM E V+ F H +P P VD++G+G+ A ++N + AE D +
Sbjct: 132 HDRMMETVFFALDDAEQLFAHH-QPTPVTSVDLLGQGRQALIDANLRLGLALAEDEIDYL 190
Query: 462 TE 463
+
Sbjct: 191 QD 192
Score = 40 (19.1 bits), Expect = 2.5e-28, Sum P(5) = 2.5e-28
Identities = 10/32 (31%), Positives = 15/32 (46%)
Query: 333 PFNIASYSLLTYMIAHVTGLQRTSNMTNSKGY 364
P I+ +S IAH GLQ+ + + Y
Sbjct: 81 PGTISPWSSKATDIAHNCGLQQVNRLERGVAY 112
Score = 38 (18.4 bits), Expect = 7.7e-33, Sum P(4) = 7.7e-33
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 392 KVGDIVDIKCAESFYDRMTECVYSSPLTSFN 422
K D+ D+ + FYD + V L +++
Sbjct: 853 KPADVRDVAQLKGFYDAIQALVAQRKLLAYH 883
>UNIPROTKB|G4NB68 [details] [associations]
symbol:MGG_11541 "Phosphoribosylformylglycinamidine
synthase" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000728 InterPro:IPR010073
InterPro:IPR016188 Pfam:PF00586 EMBL:CM001235 GO:GO:0043581
GO:GO:0006189 InterPro:IPR017926 PROSITE:PS51273 InterPro:IPR010918
Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326 KO:K01952
GO:GO:0004642 TIGRFAMs:TIGR01735 RefSeq:XP_003718414.1
ProteinModelPortal:G4NB68 EnsemblFungi:MGG_11541T0 GeneID:5050698
KEGG:mgr:MGG_11541 Uniprot:G4NB68
Length = 1359
Score = 247 (92.0 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 59/168 (35%), Positives = 89/168 (52%)
Query: 627 YQYQPVRDDIVGA-----TLG-KKVTRIGPKYQYQPVRDDIVG--ATLGKKVIS---IAV 675
Y+ Q +RD+ A T+ K + K Y P +I+ A+L V S +AV
Sbjct: 1045 YEMQKLRDNPASAEAEFATIADSKDPGLSYKLTYDPAEVNIMPMMASLRGLVTSRPKVAV 1104
Query: 676 LREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALGSAK 735
LRE+G+NG EM+ GF+ D+ + D++ +L + GL GGFS+ D LG+ +
Sbjct: 1105 LREQGVNGHAEMAFAFSAAGFDAVDVHMSDIIGGH-SLQEYAGLAACGGFSFGDTLGAGQ 1163
Query: 736 GWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLGWFSVSTQ 783
GWA S+L N+ + F R DTF+ GVCNGCQ+++ + TQ
Sbjct: 1164 GWAQSILTNDSARQTFQDFFKRPDTFALGVCNGCQMLSTIKELIPGTQ 1211
Score = 177 (67.4 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 47/101 (46%), Positives = 58/101 (57%)
Query: 72 SVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVAL---VHN 128
++ +A V +L SVGSK FL DR V GL A+ Q VGP TPLADV VV +
Sbjct: 662 AIAKATELVFKLASVGSKMFLITIGDRTVGGLTARDQLVGPWQTPLADVGVVLTSFSTSD 721
Query: 129 DLR-GAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKI 168
R G A ++GE+ L+ P ARMAVAE+L NL A I
Sbjct: 722 KTRYGNAEAMGERTPLALISPAASARMAVAESLMNLCAADI 762
Score = 114 (45.2 bits), Expect = 5.3e-23, Sum P(3) = 5.3e-23
Identities = 30/84 (35%), Positives = 47/84 (55%)
Query: 526 EVGLAFDEWDLEYYTDIFRNKLKRNPTSVECFDLAQSNSEHSRHWFFKISVAVNNEPVLN 585
++GLA D+ ++E+ + KL+R PT VE F AQ NSEH RH F S ++ + N
Sbjct: 185 KMGLALDQSEMEHLVSQY-TKLERPPTDVELFMFAQVNSEHCRHKVFNASWVIDGK---N 240
Query: 586 EDLGTLFLIWERTSYELEKLQMNA 609
ED +LF + + T + ++A
Sbjct: 241 EDT-SLFQMIKYTHQQTPDFTVSA 263
Score = 110 (43.8 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 30/113 (26%), Positives = 51/113 (45%)
Query: 595 WERTSYELEKLQMNARCADEEYNSLVTRIGPKYQYQPVRDDIVGATLGKKVTRIGPKYQY 654
W TSYE++KL+ N A+ E+ ++ P Y K+T +
Sbjct: 1040 WSSTSYEMQKLRDNPASAEAEFATIADSKDPGLSY--------------KLTYDPAEVNI 1085
Query: 655 QPVRDDIVGATLGKKVISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLL 707
P+ + G + +AVLRE+G+NG EM+ GF+ D+ + D++
Sbjct: 1086 MPMMASLRGLVTSRP--KVAVLREQGVNGHAEMAFAFSAAGFDAVDVHMSDII 1136
Score = 96 (38.9 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 20/62 (32%), Positives = 31/62 (50%)
Query: 190 GRFAFKNHGIYDHLDRSQCLPIRYVDDNNKITEDYPMNPNGSP-GKRERKKKTGRYLGKY 248
GR F + L + +P++Y D+ ++TE YP +PNGSP G GR++
Sbjct: 1259 GRAMFADESSMHALANAGLIPLKYTDNYGEVTEKYPFSPNGSPIGIAGVSSPDGRFVAMM 1318
Query: 249 GH 250
H
Sbjct: 1319 PH 1320
Score = 47 (21.6 bits), Expect = 5.3e-23, Sum P(3) = 5.3e-23
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 291 PKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGV-PFNIASYSLLTYMIAHV 349
PK + + V+R L Q VAD S Q ++ L + P I+ +S +I+HV
Sbjct: 48 PKGDSNVLAKVAR---LLQ--VADPSPSAPAGQDGENVELYITPRGISPWSSQATVISHV 102
Query: 350 TGLQ 353
GL+
Sbjct: 103 CGLK 106
Score = 46 (21.3 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 581 EPVLNEDLGTLFLIWERTSYELEKLQMNARCADEEYNSLVTRIG 624
+ + NE+LG +F + R S+E + A C + L+ +IG
Sbjct: 970 DALFNEELGAVFQV--RKSHEKRFKECFATCGPPK--GLIKKIG 1009
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 218 NKITEDYPMNPNGSPGKRE-RKKKT-GRYLGKYGHGA 252
N D PM+ PG+++ RK T R L K+ A
Sbjct: 612 NPFPIDLPMDTLFPPGRKQTRKDDTVKRNLTKFDSAA 648
Score = 38 (18.4 bits), Expect = 1.5e-14, Sum P(4) = 1.5e-14
Identities = 28/99 (28%), Positives = 42/99 (42%)
Query: 6 HPGAFSRVPYHGAHSSQHIRAPGPEQR-HAPCISHIVTLTSYISIPQVFTLARAPGFPTT 64
HP A S P + IR G R AP + S ++IP A P +
Sbjct: 306 HPTAISPFPGAATGAGGEIRDEGAVGRGSAPKMGLCGFFVSDLNIPG----AVRP-WEVD 360
Query: 65 AHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDR-CVTG 102
P + + +L+ +M +GS RF +N+ R C+TG
Sbjct: 361 IGKPHHYA--SSLD-IMLEGPIGSARF-SNEFGRACLTG 395
>ZFIN|ZDB-GENE-040426-59 [details] [associations]
symbol:tyms "thymidylate synthase" species:7955
"Danio rerio" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;IDA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0060041 "retina development in camera-type
eye" evidence=IMP] [GO:0042083
"5,10-methylenetetrahydrofolate-dependent methyltransferase
activity" evidence=IDA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 ZFIN:ZDB-GENE-040426-59
GO:GO:0060041 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 HSSP:P04818 CTD:7298 HOVERGEN:HBG001934 EMBL:AY005804
IPI:IPI00510414 RefSeq:NP_571835.1 UniGene:Dr.1047
ProteinModelPortal:Q9DGH5 SMR:Q9DGH5 STRING:Q9DGH5 GeneID:81540
KEGG:dre:81540 InParanoid:Q9DGH5 NextBio:20934154
ArrayExpress:Q9DGH5 Uniprot:Q9DGH5
Length = 319
Score = 228 (85.3 bits), Expect = 7.6e-17, P = 7.6e-17
Identities = 73/196 (37%), Positives = 98/196 (50%)
Query: 229 NGSPGKRERKKKTGRYLGKYG--HGAVQK--GMPFKDYHGK-TGRVFNVTQHAVGVIVNK 283
NGS ++ T R G G +G + G +KD H +G + Q + I +
Sbjct: 118 NGSREFLDKNGFTDREEGDLGPVYGFQWRHFGAEYKDMHTDYSGEGVDQLQKVIDTIKSN 177
Query: 284 RVRTRII-----PKSAEKISSSVSRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIAS 338
RII PK ++ C QFYV++G+LSCQLYQRS D+GLGVPFNIAS
Sbjct: 178 PEDRRIIMCAWNPKDLPLMALPPCHALC--QFYVSNGELSCQLYQRSGDIGLGVPFNIAS 235
Query: 339 YSLLTYMIAHVTGLQRTSNMTNSKG----YRRGTRDLFSRPFRRHGTIP-LSVYMKVYKV 393
Y+LLTYMIAH+TGL + + ++ G Y L + R P L + KV ++
Sbjct: 236 YALLTYMIAHITGL-KPGDFVHTLGDAHIYTNHIEPLKEQIQREPRPFPKLRIKRKVEQI 294
Query: 394 GDIVDIKCAESF--YD 407
D CAE F YD
Sbjct: 295 NDF----CAEDFEIYD 306
>FB|FBgn0024920 [details] [associations]
symbol:Ts "Ts" species:7227 "Drosophila melanogaster"
[GO:0004799 "thymidylate synthase activity" evidence=ISS;NAS]
[GO:0009263 "deoxyribonucleotide biosynthetic process"
evidence=NAS] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 EMBL:AE014134 GO:GO:0022008 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 EMBL:AF073994 eggNOG:COG0207
KO:K00560 OMA:DTNVAYL RefSeq:NP_477367.1 UniGene:Dm.30804
ProteinModelPortal:O76511 SMR:O76511 DIP:DIP-20012N
MINT:MINT-326941 STRING:O76511 PaxDb:O76511 PRIDE:O76511
EnsemblMetazoa:FBtr0077679 GeneID:33499 KEGG:dme:Dmel_CG3181
CTD:33499 FlyBase:FBgn0024920 GeneTree:ENSGT00390000014786
InParanoid:O76511 OrthoDB:EOG495X7Q PhylomeDB:O76511
GenomeRNAi:33499 NextBio:783907 Bgee:O76511 GermOnline:CG3181
Uniprot:O76511
Length = 321
Score = 224 (83.9 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 61/126 (48%), Positives = 75/126 (59%)
Query: 241 TGRYLGK----YG----HGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
TGR +G YG H Q G DY GK G + + + I N RII
Sbjct: 130 TGRAVGDLGPVYGFQWRHFGAQYGTCDDDYSGK-G--IDQLRQVIDTIRNNPSDRRIIMS 186
Query: 293 SAEKIS---SSVSRKTCLAQFYVAD--GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIA 347
+ + ++ CLAQFYV++ G+LSCQLYQRSADMGLGVPFNIASY+LLT+MIA
Sbjct: 187 AWNPLDIPKMALPPCHCLAQFYVSEKRGELSCQLYQRSADMGLGVPFNIASYALLTHMIA 246
Query: 348 HVTGLQ 353
HVTGL+
Sbjct: 247 HVTGLK 252
>UNIPROTKB|F1N8Y2 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9031 "Gallus
gallus" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 EMBL:AADN02021326 IPI:IPI00592996
Ensembl:ENSGALT00000024028 Uniprot:F1N8Y2
Length = 312
Score = 222 (83.2 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 69/166 (41%), Positives = 87/166 (52%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVIVNKRVRTRIIPKSAE-KISSSVSRKT 305
YG G +KD H + + + Q + +I RII + K S ++
Sbjct: 134 YGFQWRHFGADYKDMHTDYSNQGVDQLQKVIEMIKTNPDDRRIIMCAWNPKDISLMALPP 193
Query: 306 C--LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKG 363
C L QFYV +G+LSCQLYQRS DMGLGVPFNIASYSLLTYMIAHVTGL + ++ G
Sbjct: 194 CHALCQFYVLNGELSCQLYQRSGDMGLGVPFNIASYSLLTYMIAHVTGL-KPGEFIHTLG 252
Query: 364 ----YRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESF 405
Y L + R +P ++ KV DI D K AE F
Sbjct: 253 DAHIYLNHVEPLKVQLQREPRPLPKLRILR--KVEDISDFK-AEDF 295
>UNIPROTKB|I3LB48 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9823 "Sus
scrofa" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634 GO:GO:0005743
GO:GO:0005759 GO:GO:0046683 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
Ensembl:ENSSSCT00000031689 OMA:RINDFKA Uniprot:I3LB48
Length = 163
Score = 212 (79.7 bits), Expect = 4.4e-16, P = 4.4e-16
Identities = 49/94 (52%), Positives = 60/94 (63%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQRTSNMTNSKG--- 363
L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL + + ++ G
Sbjct: 48 LCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGL-KPGDFVHTLGDAH 106
Query: 364 -YRRGTRDLFSRPFRRHGTIP-LSVYMKVYKVGD 395
Y L + R P L + KV K+ D
Sbjct: 107 IYLNHIEPLKIQLQREPRPFPKLKILRKVEKIDD 140
>UNIPROTKB|F1PNM3 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
InterPro:IPR000398 Pfam:PF00303 PRINTS:PR00108 UniPathway:UPA00575
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468
Ensembl:ENSCAFT00000018205 Uniprot:F1PNM3
Length = 135
Score = 211 (79.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 39/47 (82%), Positives = 44/47 (93%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 9 LCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 55
>MGI|MGI:98878 [details] [associations]
symbol:Tyms "thymidylate synthase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=ISO]
[GO:0003729 "mRNA binding" evidence=ISO] [GO:0004799 "thymidylate
synthase activity" evidence=ISO] [GO:0005542 "folic acid binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005743
"mitochondrial inner membrane" evidence=ISO] [GO:0005759
"mitochondrial matrix" evidence=ISO] [GO:0006231 "dTMP biosynthetic
process" evidence=ISO] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0046078 "dUMP
metabolic process" evidence=ISO] [GO:0048037 "cofactor binding"
evidence=ISO] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 MGI:MGI:98878
GO:GO:0005634 GO:GO:0005743 GO:GO:0000166 GO:GO:0042493
GO:GO:0005759 GO:GO:0007568 GO:GO:0031100 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0046683
GO:GO:0005542 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574
GO:GO:0006235 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL CTD:7298 HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP
GO:GO:0046078 GO:GO:0019088 EMBL:M13019 EMBL:M13352 EMBL:J02617
EMBL:M13347 EMBL:M13348 EMBL:M13349 EMBL:M13350 EMBL:M13351
EMBL:X14489 IPI:IPI00130734 PIR:A26323 RefSeq:NP_067263.1
UniGene:Mm.268395 PDB:3IHI PDB:4E5O PDB:4EB4 PDBsum:3IHI
PDBsum:4E5O PDBsum:4EB4 ProteinModelPortal:P07607 SMR:P07607
STRING:P07607 PhosphoSite:P07607 REPRODUCTION-2DPAGE:P07607
PaxDb:P07607 PRIDE:P07607 Ensembl:ENSMUST00000026846 GeneID:22171
KEGG:mmu:22171 InParanoid:P07607 BindingDB:P07607 ChEMBL:CHEMBL3160
EvolutionaryTrace:P07607 NextBio:302116 Bgee:P07607 CleanEx:MM_TYMS
Genevestigator:P07607 GermOnline:ENSMUSG00000025747 Uniprot:P07607
Length = 307
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 53/112 (47%), Positives = 64/112 (57%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVIVNKRVRTRII-----PKSAEKISSSV 301
YG G +KD +G+ + Q + I RII PK ++
Sbjct: 129 YGFQWRHFGAEYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPP 188
Query: 302 SRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
C QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGLQ
Sbjct: 189 CHALC--QFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQ 238
>RGD|3921 [details] [associations]
symbol:Tyms "thymidylate synthetase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IDA]
[GO:0003729 "mRNA binding" evidence=IPI] [GO:0004799 "thymidylate
synthase activity" evidence=IDA] [GO:0005542 "folic acid binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005743
"mitochondrial inner membrane" evidence=ISO;ISS] [GO:0005759
"mitochondrial matrix" evidence=ISO;ISS] [GO:0005976 "polysaccharide
metabolic process" evidence=IEP] [GO:0006206 "pyrimidine nucleobase
metabolic process" evidence=IEP] [GO:0006231 "dTMP biosynthetic
process" evidence=IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0007568 "aging" evidence=IEP] [GO:0007623
"circadian rhythm" evidence=IEP] [GO:0008144 "drug binding"
evidence=IPI] [GO:0009636 "response to toxic substance" evidence=IEP]
[GO:0014070 "response to organic cyclic compound" evidence=IEP]
[GO:0019088 "immortalization of host cell by virus" evidence=IEP]
[GO:0019860 "uracil metabolic process" evidence=IEP] [GO:0031100
"organ regeneration" evidence=IEP] [GO:0032570 "response to
progesterone stimulus" evidence=IEP] [GO:0033189 "response to vitamin
A" evidence=IEP] [GO:0034097 "response to cytokine stimulus"
evidence=IEP] [GO:0042493 "response to drug" evidence=IEP]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045471 "response to ethanol" evidence=IEP] [GO:0046078 "dUMP
metabolic process" evidence=IDA] [GO:0046653 "tetrahydrofolate
metabolic process" evidence=IEP] [GO:0046683 "response to
organophosphorus" evidence=IEA;ISO] [GO:0048037 "cofactor binding"
evidence=IDA] [GO:0048589 "developmental growth" evidence=IEP]
[GO:0051216 "cartilage development" evidence=IEP] [GO:0051384
"response to glucocorticoid stimulus" evidence=IEP] [GO:0051593
"response to folic acid" evidence=IEP] [GO:0060574 "intestinal
epithelial cell maturation" evidence=IEP] InterPro:IPR000398
InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 RGD:3921 GO:GO:0042803 GO:GO:0005730
GO:GO:0005743 GO:GO:0000166 GO:GO:0042493 GO:GO:0045471 GO:GO:0005759
GO:GO:0008144 GO:GO:0009636 GO:GO:0007568 GO:GO:0031100 GO:GO:0007623
GO:GO:0034097 GO:GO:0003729 GO:GO:0051384 GO:GO:0051593 GO:GO:0048037
GO:GO:0051216 GO:GO:0032570 GO:GO:0048589 GO:GO:0046683 GO:GO:0033189
GO:GO:0046653 GO:GO:0005542 GO:GO:0005976 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP GeneTree:ENSGT00390000014786
GO:GO:0046078 GO:GO:0019088 EMBL:L12138 EMBL:BC126093 IPI:IPI00207230
PIR:S53715 RefSeq:NP_062052.1 UniGene:Rn.162284 PDB:1RTS PDB:2TSR
PDBsum:1RTS PDBsum:2TSR ProteinModelPortal:P45352 SMR:P45352
STRING:P45352 PhosphoSite:P45352 Ensembl:ENSRNOT00000056243
GeneID:29261 KEGG:rno:29261 InParanoid:P45352 SABIO-RK:P45352
BindingDB:P45352 ChEMBL:CHEMBL4341 EvolutionaryTrace:P45352
NextBio:608588 Genevestigator:P45352 GermOnline:ENSRNOG00000037225
GO:GO:0019860 Uniprot:P45352
Length = 307
Score = 216 (81.1 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 53/112 (47%), Positives = 64/112 (57%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVIVNKRVRTRII-----PKSAEKISSSV 301
YG G +KD +G+ + Q + I RII PK ++
Sbjct: 129 YGFQWRHFGADYKDMDSDYSGQGVDQLQKVIDTIKTNPDDRRIIMCAWNPKDLPLMALPP 188
Query: 302 SRKTCLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
C QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGLQ
Sbjct: 189 CHALC--QFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLQ 238
>FB|FBgn0032987 [details] [associations]
symbol:RpL21 "Ribosomal protein L21" species:7227 "Drosophila
melanogaster" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=ISS] [GO:0006412 "translation" evidence=IEA;ISS]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0003735 "structural
constituent of ribosome" evidence=IDA] [GO:0005840 "ribosome"
evidence=IDA] [GO:0000022 "mitotic spindle elongation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0051298 "centrosome duplication" evidence=IMP]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
EMBL:AE014134 GO:GO:0051298 GO:GO:0005811 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 GO:GO:0000022 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889 OMA:TRYMFAR
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 CTD:6144
ChiTaRS:RPL21 EMBL:AY071556 EMBL:BT001760 RefSeq:NP_610144.1
UniGene:Dm.11743 SMR:Q9V9M7 IntAct:Q9V9M7 MINT:MINT-290965
STRING:Q9V9M7 EnsemblMetazoa:FBtr0085961 EnsemblMetazoa:FBtr0331295
GeneID:35453 KEGG:dme:Dmel_CG12775 UCSC:CG12775-RA
FlyBase:FBgn0032987 InParanoid:Q9V9M7 OrthoDB:EOG4B8GW8
GenomeRNAi:35453 NextBio:793594 Uniprot:Q9V9M7
Length = 159
Score = 205 (77.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 40/71 (56%), Positives = 47/71 (66%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISS 299
K G + GHGAVQKG+P+K YHGKTGR+FNVTQHAVGVIVNKRVR +I+ K
Sbjct: 35 KIGDIVDIKGHGAVQKGLPYKAYHGKTGRIFNVTQHAVGVIVNKRVRGKILAKRVNVRIE 94
Query: 300 SVSRKTCLAQF 310
+ C F
Sbjct: 95 HIHHSKCREDF 105
Score = 204 (76.9 bits), Expect = 3.1e-15, P = 3.1e-15
Identities = 36/43 (83%), Positives = 41/43 (95%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTNSKGYRRGTRD+FSRPFR+HG IPLS YM+V+K+GDIVDIK
Sbjct: 1 MTNSKGYRRGTRDMFSRPFRKHGVIPLSTYMRVFKIGDIVDIK 43
>UNIPROTKB|Q8WYK3 [details] [associations]
symbol:TS "Thymidylate synthetase, isoform CRA_a"
species:9606 "Homo sapiens" [GO:0004799 "thymidylate synthase
activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 Pfam:PF00303
PRINTS:PR00108 GO:GO:0005737 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077208 IPI:IPI00103732 SMR:Q8WYK3 STRING:Q8WYK3
Ensembl:ENST00000323224 UCSC:uc010dkb.1 Uniprot:Q8WYK3
Length = 279
Score = 205 (77.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
L QFYV + +LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 164 LCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 210
>UNIPROTKB|Q8WYK4 [details] [associations]
symbol:TS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0006235 "dTTP biosynthetic process" evidence=IEA]
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 EMBL:CH471113 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 HOGENOM:HOG000257899 HSSP:P04818
HOVERGEN:HBG001934 UniGene:Hs.369762 HGNC:HGNC:12441 EMBL:AP001178
EMBL:AB077207 IPI:IPI00103733 SMR:Q8WYK4 STRING:Q8WYK4
Ensembl:ENST00000323250 UCSC:uc010dkc.1 H-InvDB:HIX0021150
Uniprot:Q8WYK4
Length = 230
Score = 205 (77.2 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
L QFYV + +LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 115 LCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 161
>UNIPROTKB|F1PU23 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GeneTree:ENSGT00390000014786
EMBL:AAEX03005468 Ensembl:ENSCAFT00000029138 Uniprot:F1PU23
Length = 314
Score = 211 (79.3 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 39/47 (82%), Positives = 44/47 (93%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 199 LCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 245
Score = 42 (19.8 bits), Expect = 6.2e-15, Sum P(2) = 6.2e-15
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 62 PTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIA 105
P PP LQ L V ++S G++ K DR TG ++
Sbjct: 20 PRARPQPPPHGELQYLRQVEHILSCGAR-----KHDRTGTGTLS 58
>UNIPROTKB|F1PNL9 [details] [associations]
symbol:TYMS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] [GO:0046683 "response to organophosphorus"
evidence=IEA] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0046683
GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GeneTree:ENSGT00390000014786 EMBL:AAEX03005468 OMA:HDSIFDY
Ensembl:ENSCAFT00000036918 Uniprot:F1PNL9
Length = 354
Score = 211 (79.3 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 39/47 (82%), Positives = 44/47 (93%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 199 LCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 245
Score = 42 (19.8 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 62 PTTAHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIA 105
P PP LQ L V ++S G++ K DR TG ++
Sbjct: 20 PRARPQPPPHGELQYLRQVEHILSCGAR-----KHDRTGTGTLS 58
>UNIPROTKB|F1MY63 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0046683 "response to organophosphorus" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005634
GO:GO:0005743 GO:GO:0005759 GO:GO:0046683 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 IPI:IPI00708073 UniGene:Bt.7738
GeneTree:ENSGT00390000014786 EMBL:DAAA02056661
Ensembl:ENSBTAT00000009214 OMA:HDSIFDY Uniprot:F1MY63
Length = 354
Score = 208 (78.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 51/110 (46%), Positives = 65/110 (59%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVI-VNKRVRTRIIPKSAEKISSSVSRKT 305
YG G +KD + +G+ + Q + I N R I+ K ++
Sbjct: 138 YGFQWRHFGAEYKDMDSEYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPP 197
Query: 306 C--LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
C L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+T L+
Sbjct: 198 CHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLK 247
>UNIPROTKB|Q2TA32 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9913 "Bos
taurus" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005759
"mitochondrial matrix" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006235 "dTTP
biosynthetic process" evidence=IEA] [GO:0004799 "thymidylate
synthase activity" evidence=IEA] [GO:0006231 "dTMP biosynthetic
process" evidence=IEA] InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
GO:GO:0005634 GO:GO:0005743 GO:GO:0005759 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 EMBL:BC111139 EMBL:AH009263
IPI:IPI00708073 RefSeq:NP_001032905.1 UniGene:Bt.7738 HSSP:P04818
ProteinModelPortal:Q2TA32 SMR:Q2TA32 STRING:Q2TA32 PRIDE:Q2TA32
GeneID:507631 KEGG:bta:507631 CTD:7298 HOVERGEN:HBG001934
InParanoid:Q2TA32 OrthoDB:EOG4ZKJMP NextBio:20868149 Uniprot:Q2TA32
Length = 354
Score = 208 (78.3 bits), Expect = 8.4e-14, P = 8.4e-14
Identities = 51/110 (46%), Positives = 65/110 (59%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVI-VNKRVRTRIIPKSAEKISSSVSRKT 305
YG G +KD + +G+ + Q + I N R I+ K ++
Sbjct: 138 YGFQWRHFGAEYKDMDSEYSGQGVDQLQKVIDTIKTNPNDRRIILCAWNPKDLPLMALPP 197
Query: 306 C--LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
C L QFYV +G+LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+T L+
Sbjct: 198 CHALCQFYVVNGELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITDLK 247
>UNIPROTKB|P04818 [details] [associations]
symbol:TYMS "Thymidylate synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=IEA] [GO:0005542 "folic acid binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005976
"polysaccharide metabolic process" evidence=IEA] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0007568 "aging"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0008144 "drug binding" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0019088 "immortalization of host
cell by virus" evidence=IEA] [GO:0019860 "uracil metabolic process"
evidence=IEA] [GO:0031100 "organ regeneration" evidence=IEA]
[GO:0032570 "response to progesterone stimulus" evidence=IEA]
[GO:0033189 "response to vitamin A" evidence=IEA] [GO:0034097
"response to cytokine stimulus" evidence=IEA] [GO:0042493 "response
to drug" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0045471 "response to ethanol"
evidence=IEA] [GO:0046078 "dUMP metabolic process" evidence=IEA]
[GO:0046653 "tetrahydrofolate metabolic process" evidence=IEA]
[GO:0048037 "cofactor binding" evidence=IEA] [GO:0048589
"developmental growth" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IEA] [GO:0051384 "response to glucocorticoid
stimulus" evidence=IEA] [GO:0051593 "response to folic acid"
evidence=IEA] [GO:0060574 "intestinal epithelial cell maturation"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0048015 "phosphatidylinositol-mediated signaling" evidence=NAS]
[GO:0006260 "DNA replication" evidence=NAS] [GO:0006281 "DNA
repair" evidence=NAS] [GO:0046683 "response to organophosphorus"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005759 "mitochondrial matrix" evidence=IDA] [GO:0005743
"mitochondrial inner membrane" evidence=IDA] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=TAS]
[GO:0009157 "deoxyribonucleoside monophosphate biosynthetic
process" evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell
cycle" evidence=TAS] [GO:0000083 "regulation of transcription
involved in G1/S phase of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0004799
"thymidylate synthase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006206 "pyrimidine nucleobase metabolic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0046134 "pyrimidine nucleoside biosynthetic process"
evidence=TAS] [GO:0055086 "nucleobase-containing small molecule
metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005743 GO:GO:0000166
GO:GO:0042493 GO:GO:0005759 GO:GO:0006260 GO:GO:0007568
GO:GO:0031100 GO:GO:0006206 GO:GO:0006281 GO:GO:0051384
GO:GO:0048037 GO:GO:0051216 GO:GO:0048589 GO:GO:0048015
GO:GO:0046683 GO:GO:0000083 GO:GO:0005542 DrugBank:DB01101
DrugBank:DB00441 DrugBank:DB00544 DrugBank:DB00642 GO:GO:0046134
GO:GO:0006231 Orphanet:240839 Orphanet:240855 Orphanet:240955
Orphanet:240963 GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0060574 GO:GO:0006235
DrugBank:DB00293 DrugBank:DB00322 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL CTD:7298
HOVERGEN:HBG001934 OrthoDB:EOG4ZKJMP EMBL:X02308 EMBL:D00596
EMBL:AB062290 EMBL:BC002567 EMBL:BC013919 EMBL:BC083512 EMBL:D00517
IPI:IPI00221108 PIR:A23047 RefSeq:NP_001062.1 UniGene:Hs.369762
PDB:1HVY PDB:1HW3 PDB:1HW4 PDB:1HZW PDB:1I00 PDB:1JU6 PDB:1JUJ
PDB:1YPV PDB:2ONB PDB:2RD8 PDB:2RDA PDB:3EAW PDB:3EBU PDB:3ED7
PDB:3EDW PDB:3EF9 PDB:3EGY PDB:3EHI PDB:3EJL PDB:3GG5 PDB:3GH0
PDB:3GH2 PDB:3H9K PDB:3HB8 PDB:3N5E PDB:3N5G PDB:3OB7 PDB:4E28
PDB:4GYH PDB:4H1I PDBsum:1HVY PDBsum:1HW3 PDBsum:1HW4 PDBsum:1HZW
PDBsum:1I00 PDBsum:1JU6 PDBsum:1JUJ PDBsum:1YPV PDBsum:2ONB
PDBsum:2RD8 PDBsum:2RDA PDBsum:3EAW PDBsum:3EBU PDBsum:3ED7
PDBsum:3EDW PDBsum:3EF9 PDBsum:3EGY PDBsum:3EHI PDBsum:3EJL
PDBsum:3GG5 PDBsum:3GH0 PDBsum:3GH2 PDBsum:3H9K PDBsum:3HB8
PDBsum:3N5E PDBsum:3N5G PDBsum:3OB7 PDBsum:4E28 PDBsum:4GYH
PDBsum:4H1I DisProt:DP00073 ProteinModelPortal:P04818 SMR:P04818
IntAct:P04818 STRING:P04818 PhosphoSite:P04818 DMDM:136611
PaxDb:P04818 PRIDE:P04818 DNASU:7298 Ensembl:ENST00000323274
GeneID:7298 KEGG:hsa:7298 UCSC:uc010dka.1 GeneCards:GC18P000647
HGNC:HGNC:12441 HPA:CAB002784 MIM:188350 neXtProt:NX_P04818
PharmGKB:PA359 InParanoid:P04818 PhylomeDB:P04818
BioCyc:MetaCyc:HS11096-MONOMER SABIO-RK:P04818 BindingDB:P04818
ChEMBL:CHEMBL1952 ChiTaRS:TYMS DrugBank:DB00650 DrugBank:DB00432
EvolutionaryTrace:P04818 GenomeRNAi:7298 NextBio:28543
ArrayExpress:P04818 Bgee:P04818 CleanEx:HS_TYMS
Genevestigator:P04818 GermOnline:ENSG00000176890 GO:GO:0009157
GO:GO:0046078 GO:GO:0019088 Uniprot:P04818
Length = 313
Score = 205 (77.2 bits), Expect = 8.6e-14, P = 8.6e-14
Identities = 38/47 (80%), Positives = 43/47 (91%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
L QFYV + +LSCQLYQRS DMGLGVPFNIASY+LLTYMIAH+TGL+
Sbjct: 198 LCQFYVVNSELSCQLYQRSGDMGLGVPFNIASYALLTYMIAHITGLK 244
>TAIR|locus:2042649 [details] [associations]
symbol:THY-1 "thymidylate synthase 1" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA] [GO:0006545
"glycine biosynthetic process" evidence=IEA] [GO:0006730
"one-carbon metabolic process" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009257 "10-formyltetrahydrofolate biosynthetic
process" evidence=ISS] InterPro:IPR000398 InterPro:IPR001796
InterPro:IPR012262 InterPro:IPR017925 InterPro:IPR020940
Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389 PRINTS:PR00108
PROSITE:PS00075 PROSITE:PS00091 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0006730 EMBL:AC007047 GO:GO:0009257
GO:GO:0006231 EMBL:L08593 EMBL:AY063968 EMBL:AY114032
IPI:IPI00530946 PIR:E84539 RefSeq:NP_179230.1 UniGene:At.27124
ProteinModelPortal:Q05762 SMR:Q05762 IntAct:Q05762 STRING:Q05762
PaxDb:Q05762 PRIDE:Q05762 EnsemblPlants:AT2G16370.1 GeneID:816134
KEGG:ath:AT2G16370 TAIR:At2g16370 eggNOG:COG0262
HOGENOM:HOG000257901 InParanoid:Q05762 KO:K13998 OMA:NGPACEA
PhylomeDB:Q05762 ProtClustDB:CLSN2683596 Genevestigator:Q05762
GermOnline:AT2G16370 GO:GO:0004146 GO:GO:0004799 GO:GO:0006545
Gene3D:3.30.572.10 Gene3D:3.40.430.10 InterPro:IPR023451
SUPFAM:SSF53597 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 Uniprot:Q05762
Length = 519
Score = 209 (78.6 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 55/110 (50%), Positives = 65/110 (59%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSS--VSRK 304
YG G + D H TG+ F+ + I N RII SA S ++
Sbjct: 341 YGFQWRHFGAKYTDMHADYTGQGFDQLVDVIDKIKNNPDDRRII-MSAWNPSDLKLMALP 399
Query: 305 TC--LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 352
C AQFYVA+G+LSCQ+YQRSADMGLGVPFNIASYSLLT M+AHV L
Sbjct: 400 PCHMFAQFYVAEGELSCQMYQRSADMGLGVPFNIASYSLLTCMLAHVCDL 449
>TIGR_CMR|BA_2236 [details] [associations]
symbol:BA_2236 "thymidylate synthase" species:198094
"Bacillus anthracis str. Ames" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 RefSeq:NP_844627.1
RefSeq:YP_018881.1 RefSeq:YP_028345.1 ProteinModelPortal:Q81R23
SMR:Q81R23 DNASU:1085458 EnsemblBacteria:EBBACT00000013190
EnsemblBacteria:EBBACT00000017828 EnsemblBacteria:EBBACT00000020667
GeneID:1085458 GeneID:2814626 GeneID:2850789 KEGG:ban:BA_2236
KEGG:bar:GBAA_2236 KEGG:bat:BAS2082 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
BioCyc:BANT260799:GJAJ-2150-MONOMER
BioCyc:BANT261594:GJ7F-2225-MONOMER Uniprot:Q81R23
Length = 318
Score = 201 (75.8 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 48/114 (42%), Positives = 67/114 (58%)
Query: 244 YLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS--AEKISSSV 301
+ KYG+ G ++ + G + + + +I R+I + E + S +
Sbjct: 137 FSNKYGYLGDVYGKQWRAWKTTAGETLDQLKDVIEMIKKTPDSRRLIVSAWNPEDVPS-M 195
Query: 302 SRKTC--LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
+ C L QFYVADGKLSCQLYQRS D+ LG+PFNIASYSLLT++IAH GL+
Sbjct: 196 ALPPCHTLFQFYVADGKLSCQLYQRSGDIFLGIPFNIASYSLLTHLIAHECGLE 249
>UNIPROTKB|D0UZU4 [details] [associations]
symbol:ORF75 "ORF75 protein" species:37296 "Human
herpesvirus 8" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR010077 InterPro:IPR016188 GO:GO:0005198 GO:GO:0008152
GO:GO:0019033 InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042
SUPFAM:SSF55326 GO:GO:0004642 EMBL:HQ404500 EMBL:GQ994935
IntAct:D0UZU4 InterPro:IPR024346 Pfam:PF12818 TIGRFAMs:TIGR01739
Uniprot:D0UZU4
Length = 1296
Score = 118 (46.6 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 77 LNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVALVHNDL 130
++ ++R +VGSK F T +DRC GLIAQQ VGPL P++D +V +H+ +
Sbjct: 570 IHQLLRHATVGSKEFFTRHMDRCSNGLIAQQAGVGPLDIPVSDYHLV--LHSSM 621
Score = 110 (43.8 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 37/118 (31%), Positives = 54/118 (45%)
Query: 673 IAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALG 732
+A L G + + A Q GFEV +TV++L + +L F GL+ +
Sbjct: 1019 VAALVLPGSSAPYALMAALQNTGFEVATVTVEELKRGQ-SLSGFSGLITCLRTGCQASYA 1077
Query: 733 SAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCN--GCQLMNLLGWFSVSTQARQPY 788
SA+GW +L + + L +F+ R DTFS C G QL+ LG V PY
Sbjct: 1078 SARGWVLALCNDPTCASTLTEFLNRPDTFSI-CCGEVGFQLLVALG--VVGRSESSPY 1132
Score = 89 (36.4 bits), Expect = 3.4e-13, Sum P(3) = 3.4e-13
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 131 RGAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISDLK 172
RG A ++GEQ K + GA A+ EALTNL+F+ +S L+
Sbjct: 667 RGQAMAMGEQAYKMATNVSTGATYAITEALTNLMFSPVSKLQ 708
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 65 AHTPPNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGP 112
A+T + SV + + + L+ S F + +TGL A + +GP
Sbjct: 242 AYTHVHSSVQRGIRGLGNLL-FHSTLFPGGQTQGALTGLYATEPALGP 288
>RGD|2320757 [details] [associations]
symbol:LOC100361103 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2320757
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
OrthoDB:EOG4K6G5D OMA:RIERIKH IPI:IPI00400550 RefSeq:XP_002726520.1
RefSeq:XP_002729483.1 Ensembl:ENSRNOT00000042619 GeneID:100361103
KEGG:rno:100361103 UCSC:RGD:2320757 Uniprot:D3Z9G3
Length = 160
Score = 183 (69.5 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 42/81 (51%), Positives = 52/81 (64%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDVVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
+I S SR + L + D K
Sbjct: 95 RIKHSKSRDSFLKRVKENDQK 115
Score = 176 (67.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GD+VDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDVVDIK 43
>TAIR|locus:2139544 [details] [associations]
symbol:THY-2 "thymidylate synthase 2" species:3702
"Arabidopsis thaliana" [GO:0004146 "dihydrofolate reductase
activity" evidence=IEA;ISS] [GO:0004799 "thymidylate synthase
activity" evidence=IEA;ISS] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006545 "glycine biosynthetic process"
evidence=IEA] [GO:0006730 "one-carbon metabolic process"
evidence=IEA] [GO:0009165 "nucleotide biosynthetic process"
evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009257
"10-formyltetrahydrofolate biosynthetic process" evidence=ISS]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 InterPro:IPR020940 Pfam:PF00186 Pfam:PF00303
PIRSF:PIRSF000389 PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS00091
PROSITE:PS51330 UniPathway:UPA00077 InterPro:IPR024072
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006730 EMBL:AL161585
EMBL:AL023094 GO:GO:0009257 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 KO:K13998 ProtClustDB:CLSN2683596
GO:GO:0004146 GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10
Gene3D:3.40.430.10 InterPro:IPR023451 SUPFAM:SSF53597
SUPFAM:SSF55831 TIGRFAMs:TIGR03284 EMBL:L08594 EMBL:AK227728
EMBL:BT003159 IPI:IPI00526255 PIR:T05277 RefSeq:NP_195183.2
UniGene:At.31491 ProteinModelPortal:Q05763 SMR:Q05763 STRING:Q05763
PaxDb:Q05763 PRIDE:Q05763 EnsemblPlants:AT4G34570.1 GeneID:829609
KEGG:ath:AT4G34570 TAIR:At4g34570 InParanoid:Q05763 OMA:CEAVHLT
PhylomeDB:Q05763 Genevestigator:Q05763 GermOnline:AT4G34570
Uniprot:Q05763
Length = 565
Score = 205 (77.2 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 54/110 (49%), Positives = 65/110 (59%)
Query: 248 YGHGAVQKGMPFKDYHGK-TGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSS--VSRK 304
YG G + D H TG+ F+ + I N RII SA S ++
Sbjct: 387 YGFQWRHFGAKYTDMHADYTGQGFDQLLDVINKIKNNPDDRRII-MSAWNPSDLKLMALP 445
Query: 305 TC--LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 352
C AQFYVA+G+LSCQ+YQRSADMGLGVPFNIASYSLLT ++AHV L
Sbjct: 446 PCHMFAQFYVANGELSCQMYQRSADMGLGVPFNIASYSLLTCILAHVCDL 495
>RGD|1562601 [details] [associations]
symbol:RGD1562601 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1562601 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00208158
RefSeq:XP_001064745.1 RefSeq:XP_212810.1 PRIDE:D3ZLH3
Ensembl:ENSRNOT00000048420 GeneID:291308 KEGG:rno:291308 CTD:291308
NextBio:632372 Uniprot:D3ZLH3
Length = 160
Score = 182 (69.1 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 35/57 (61%), Positives = 42/57 (73%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
MTN+KG RRGTR +FSRPFR+HG IPL+ YM++YK GDIVDIK + RM Y
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVIPLATYMRIYKKGDIVDIKGMGTVQKRMPHKYY 57
Score = 169 (64.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 41/81 (50%), Positives = 49/81 (60%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQK MP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKRMPHKYYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR L + D K
Sbjct: 95 HIKHSKSRDGFLKRVKENDQK 115
>RGD|1583496 [details] [associations]
symbol:LOC681195 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1583496 RGD:2324079 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:GVIVYKV OrthoDB:EOG4K6G5D
IPI:IPI00475747 RefSeq:XP_002727833.1 RefSeq:XP_003752410.1
Ensembl:ENSRNOT00000048373 GeneID:100362779 KEGG:rno:100362779
UCSC:RGD:1583496 Uniprot:D3ZZH9
Length = 160
Score = 181 (68.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK----SAE 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVQIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM +YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMLIYKKGDIVDIK 43
>RGD|2324079 [details] [associations]
symbol:LOC100362779 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:1583496
RGD:2324079 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:GVIVYKV OrthoDB:EOG4K6G5D
IPI:IPI00475747 RefSeq:XP_002727833.1 RefSeq:XP_003752410.1
Ensembl:ENSRNOT00000048373 GeneID:100362779 KEGG:rno:100362779
UCSC:RGD:1583496 Uniprot:D3ZZH9
Length = 160
Score = 181 (68.8 bits), Expect = 9.0e-13, P = 9.0e-13
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK----SAE 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVQIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM +YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMLIYKKGDIVDIK 43
>MGI|MGI:1278340 [details] [associations]
symbol:Rpl21 "ribosomal protein L21" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003735
"structural constituent of ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 MGI:MGI:1278340
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 eggNOG:COG2139 HOGENOM:HOG000194513
PANTHER:PTHR20981 HOVERGEN:HBG001518 OrthoDB:EOG4K6G5D EMBL:U93863
IPI:IPI00555045 UniGene:Mm.316592 UniGene:Mm.371575
UniGene:Mm.440507 ProteinModelPortal:O09167 SMR:O09167
STRING:O09167 PhosphoSite:O09167 PaxDb:O09167 PRIDE:O09167
InParanoid:O09167 CleanEx:MM_RPL21 Genevestigator:O09167
GermOnline:ENSMUSG00000041453 GermOnline:ENSMUSG00000066443
GermOnline:ENSMUSG00000068014 GermOnline:ENSMUSG00000068397
GermOnline:ENSMUSG00000072901 Uniprot:O09167
Length = 160
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|2321753 [details] [associations]
symbol:LOC100360604 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2321753
RGD:68390 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH474012
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889
OMA:TRYMFAR PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
HOVERGEN:HBG001518 UniGene:Rn.129926 UniGene:Rn.156707
UniGene:Rn.201357 UniGene:Rn.203267 UniGene:Rn.83200 EMBL:BC058459
EMBL:BC086441 IPI:IPI00565398 RefSeq:XP_002728035.1
RefSeq:XP_002730236.1 RefSeq:XP_003752673.1 RefSeq:XP_003754779.1
SMR:Q6PDW2 STRING:Q6PDW2 Ensembl:ENSRNOT00000001265
Ensembl:ENSRNOT00000040249 Ensembl:ENSRNOT00000046791
Ensembl:ENSRNOT00000047936 GeneID:100361811 GeneID:100362550
KEGG:rno:100361811 KEGG:rno:100362550 UCSC:RGD:2321753
InParanoid:Q6PDW2 NextBio:717396 Genevestigator:Q6PDW2
Uniprot:Q6PDW2
Length = 160
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|68390 [details] [associations]
symbol:Rpl21 "ribosomal protein L21" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=ISO] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 RGD:68390 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 CTD:6144
HOVERGEN:HBG001518 OrthoDB:EOG4K6G5D EMBL:M27905 EMBL:X15216
IPI:IPI00421720 PIR:A33295 RefSeq:NP_445782.1 UniGene:Rn.129926
UniGene:Rn.156707 UniGene:Rn.201357 UniGene:Rn.203267
UniGene:Rn.83200 ProteinModelPortal:P20280 SMR:P20280 STRING:P20280
PRIDE:P20280 GeneID:79449 KEGG:rno:79449 InParanoid:P20280
NextBio:614816 ArrayExpress:P20280 Genevestigator:P20280
GermOnline:ENSRNOG00000000957 GermOnline:ENSRNOG00000029410
GermOnline:ENSRNOG00000032803 GermOnline:ENSRNOG00000034135
Uniprot:P20280
Length = 160
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>UNIPROTKB|Q6PDW2 [details] [associations]
symbol:LOC100360604 "RCG42727, isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2321753
RGD:68390 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:CH474012
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889
OMA:TRYMFAR PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
HOVERGEN:HBG001518 UniGene:Rn.129926 UniGene:Rn.156707
UniGene:Rn.201357 UniGene:Rn.203267 UniGene:Rn.83200 EMBL:BC058459
EMBL:BC086441 IPI:IPI00565398 RefSeq:XP_002728035.1
RefSeq:XP_002730236.1 RefSeq:XP_003752673.1 RefSeq:XP_003754779.1
SMR:Q6PDW2 STRING:Q6PDW2 Ensembl:ENSRNOT00000001265
Ensembl:ENSRNOT00000040249 Ensembl:ENSRNOT00000046791
Ensembl:ENSRNOT00000047936 GeneID:100361811 GeneID:100362550
KEGG:rno:100361811 KEGG:rno:100362550 UCSC:RGD:2321753
InParanoid:Q6PDW2 NextBio:717396 Genevestigator:Q6PDW2
Uniprot:Q6PDW2
Length = 160
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>UNIPROTKB|J9NSP4 [details] [associations]
symbol:J9NSP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OMA:NVSKHAL GeneTree:ENSGT00390000001293
EMBL:AAEX03007872 Ensembl:ENSCAFT00000037808 Uniprot:J9NSP4
Length = 160
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDVKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 176 (67.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVD+K
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDVK 43
>RGD|1562469 [details] [associations]
symbol:RGD1562469 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562469 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00369443 RefSeq:XP_001054778.1
PRIDE:D3ZXP5 Ensembl:ENSRNOT00000044723 GeneID:366689
KEGG:rno:366689 UCSC:RGD:1562469 CTD:366689 NextBio:689861
Uniprot:D3ZXP5
Length = 160
Score = 180 (68.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 41/75 (54%), Positives = 49/75 (65%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA-- 294
R K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K
Sbjct: 32 RTYKKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINV 91
Query: 295 --EKISSSVSRKTCL 307
E I S SR + L
Sbjct: 92 WIEHIKHSKSRDSFL 106
Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM+ YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRTYKKGDIVDIK 43
>UNIPROTKB|P46778 [details] [associations]
symbol:RPL21 "60S ribosomal protein L21" species:9606 "Homo
sapiens" [GO:0006412 "translation" evidence=NAS;TAS] [GO:0003735
"structural constituent of ribosome" evidence=NAS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IDA] [GO:0003723 "RNA
binding" evidence=TAS] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
Reactome:REACT_116125 GO:GO:0000184 GO:GO:0006413 GO:GO:0003723
GO:GO:0003735 Orphanet:55654 GO:GO:0006415 GO:GO:0006414
InterPro:IPR008991 SUPFAM:SSF50104 Reactome:REACT_1762
GO:GO:0006614 GO:GO:0022625 GO:GO:0019083 eggNOG:COG2139 KO:K02889
OMA:TRYMFAR PANTHER:PTHR20981 EMBL:X89401 EMBL:U14967 EMBL:AB061826
EMBL:BC001603 EMBL:BC007505 EMBL:BC062981 EMBL:BC070184
EMBL:BC070323 EMBL:BC070330 EMBL:U25789 EMBL:L38826 EMBL:AB007176
IPI:IPI00247583 PIR:S55913 RefSeq:NP_000973.2 UniGene:Hs.381123
UniGene:Hs.535873 ProteinModelPortal:P46778 SMR:P46778
IntAct:P46778 STRING:P46778 PhosphoSite:P46778 DMDM:1172991
SWISS-2DPAGE:P46778 PaxDb:P46778 PRIDE:P46778
Ensembl:ENST00000272274 Ensembl:ENST00000311549
Ensembl:ENST00000319826 Ensembl:ENST00000326092 GeneID:6144
KEGG:hsa:6144 UCSC:uc001uqz.1 CTD:6144 GeneCards:GC13P027827
H-InvDB:HIX0096689 HGNC:HGNC:10313 HPA:HPA047252 MIM:603636
neXtProt:NX_P46778 PharmGKB:PA34683 HOVERGEN:HBG001518
InParanoid:P46778 OrthoDB:EOG4K6G5D PhylomeDB:P46778 ChiTaRS:RPL21
GenomeRNAi:6144 NextBio:23871 ArrayExpress:P46778 Bgee:P46778
CleanEx:HS_RPL21 Genevestigator:P46778 GermOnline:ENSG00000122026
Uniprot:P46778
Length = 160
Score = 179 (68.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>UNIPROTKB|F1RTJ9 [details] [associations]
symbol:RPL21 "60S ribosomal protein L21" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
GO:GO:0006412 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:CU695218 RefSeq:XP_003482912.1
RefSeq:XP_003482913.1 RefSeq:XP_003482914.1 RefSeq:XP_003482915.1
ProteinModelPortal:F1RTJ9 SMR:F1RTJ9 PRIDE:F1RTJ9
Ensembl:ENSSSCT00000010191 GeneID:100736809 KEGG:ssc:100736809
Uniprot:F1RTJ9
Length = 160
Score = 179 (68.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>UNIPROTKB|F1NP85 [details] [associations]
symbol:RPL21 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
GO:GO:0006412 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AADN02005176 IPI:IPI00598409
Ensembl:ENSGALT00000030100 Uniprot:F1NP85
Length = 163
Score = 179 (68.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 31/46 (67%), Positives = 40/46 (86%)
Query: 355 TSNMTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
++ MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 SAKMTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 46
Score = 176 (67.0 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 40/72 (55%), Positives = 48/72 (66%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQ+GMP K YHGKTGRV+NVTQHAVGVIVNK+V+ +I+ K E
Sbjct: 38 KKGDIVDIKGMGTVQQGMPHKCYHGKTGRVYNVTQHAVGVIVNKKVKGKILAKRINVRIE 97
Query: 296 KISSSVSRKTCL 307
I S SR + L
Sbjct: 98 HIKHSKSRDSFL 109
>UNIPROTKB|F1PWM2 [details] [associations]
symbol:RPL21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
OMA:TRYMFAR PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
EMBL:AAEX03014245 Ensembl:ENSCAFT00000010959 Uniprot:F1PWM2
Length = 162
Score = 179 (68.1 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E
Sbjct: 37 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 96
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 97 HIKHSKSRDSFLKRVKENDQK 117
Score = 166 (63.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGT--IPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGAGVVPLATYMRIYKKGDIVDIK 45
>UNIPROTKB|J9P4T5 [details] [associations]
symbol:LOC100855701 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OMA:NDAARHE
EMBL:AAEX03007831 Ensembl:ENSCAFT00000037820 Uniprot:J9P4T5
Length = 160
Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRGSFLKRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|1586616 [details] [associations]
symbol:LOC686080 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1586616 RGD:1597962
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
OrthoDB:EOG4K6G5D IPI:IPI00764351 PRIDE:D4A870
Ensembl:ENSRNOT00000045446 Uniprot:D4A870
Length = 160
Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPQKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKMINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKQSKSRDSFLNRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|1597962 [details] [associations]
symbol:LOC682512 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1586616 RGD:1597962
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
OrthoDB:EOG4K6G5D IPI:IPI00764351 PRIDE:D4A870
Ensembl:ENSRNOT00000045446 Uniprot:D4A870
Length = 160
Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 42/81 (51%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPQKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKMINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKQSKSRDSFLNRVKENDQK 115
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>UNIPROTKB|Q861S4 [details] [associations]
symbol:RPL21 "Similar to ribosomal protein L21"
species:9913 "Bos taurus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
eggNOG:COG2139 HOGENOM:HOG000194513 KO:K02889 OMA:TRYMFAR
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 CTD:6144
HOVERGEN:HBG001518 OrthoDB:EOG4K6G5D EMBL:DAAA02033166
EMBL:AB098887 EMBL:AB099050 EMBL:AB099075 IPI:IPI00715868
RefSeq:NP_001178341.1 UniGene:Bt.5211 STRING:Q861S4
Ensembl:ENSBTAT00000002160 GeneID:326584 KEGG:bta:326584
InParanoid:Q861S4 NextBio:20809657 Uniprot:Q861S4
Length = 160
Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 40/72 (55%), Positives = 48/72 (66%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E I S SR
Sbjct: 44 GMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRD 103
Query: 305 TCLAQFYVADGK 316
+ L + D K
Sbjct: 104 SFLKRVKENDQK 115
Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 30/43 (69%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++Y+ GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYRKGDIVDIK 43
>UNIPROTKB|J9NVK8 [details] [associations]
symbol:J9NVK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 EMBL:AAEX03015332
Ensembl:ENSCAFT00000025360 OMA:NGKEHEL Uniprot:J9NVK8
Length = 160
Score = 178 (67.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVHIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L D K
Sbjct: 95 HIKHSKSRDSFLKHVKENDQK 115
Score = 169 (64.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGT +FSRP+R+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTHYMFSRPYRKHGVVPLATYMRIYKKGDIVDIK 43
>UNIPROTKB|Q0C504 [details] [associations]
symbol:thyA "Thymidylate synthase" species:228405
"Hyphomonas neptunium ATCC 15444" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 GO:GO:0009265 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:YP_759189.1 ProteinModelPortal:Q0C504 SMR:Q0C504
STRING:Q0C504 GeneID:4287829 KEGG:hne:HNE_0459 PATRIC:32213710
BioCyc:HNEP228405:GI69-503-MONOMER Uniprot:Q0C504
Length = 264
Score = 187 (70.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 37/48 (77%), Positives = 41/48 (85%)
Query: 306 CLAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
CL QF V DGKL+CQLYQRSAD+ LGVPFNIASY+LLT M+A TGLQ
Sbjct: 148 CLFQFNVMDGKLNCQLYQRSADVFLGVPFNIASYALLTMMMARATGLQ 195
>RGD|1562839 [details] [associations]
symbol:RGD1562839 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562839 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00213243 RefSeq:XP_001073633.1
RefSeq:XP_213130.1 PRIDE:D3ZMI8 Ensembl:ENSRNOT00000048115
GeneID:300731 KEGG:rno:300731 UCSC:RGD:1562839 CTD:300731
NextBio:647396 Uniprot:D3ZMI8
Length = 160
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
Score = 175 (66.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAK 87
>ZFIN|ZDB-GENE-030131-8512 [details] [associations]
symbol:rpl21 "ribosomal protein L21" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
ZFIN:ZDB-GENE-030131-8512 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 CTD:6144 HOVERGEN:HBG001518
OrthoDB:EOG4K6G5D EMBL:AL929009 EMBL:BC071354 IPI:IPI00502862
RefSeq:NP_001002155.1 UniGene:Dr.75923 SMR:Q6IQQ0 STRING:Q6IQQ0
Ensembl:ENSDART00000002595 GeneID:336568 KEGG:dre:336568
InParanoid:Q6IQQ0 NextBio:20811808 Uniprot:Q6IQQ0
Length = 160
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G +QKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGTGTIQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCL 307
I S SR + L
Sbjct: 95 HIKHSKSRDSFL 106
Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN++G RRGTR +F+RPFR+HG IPLS YM++YK GDIVDIK
Sbjct: 1 MTNTRGKRRGTRYMFARPFRKHGPIPLSTYMRIYKKGDIVDIK 43
>RGD|1560414 [details] [associations]
symbol:RGD1560414 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1560414 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00361993
Ensembl:ENSRNOT00000054860 Uniprot:D3ZRA9
Length = 155
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 34/57 (59%), Positives = 41/57 (71%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
MTN+KG RRGT +FSRPFR+HG IPL+ YM++YK GDIVDIK +F M Y
Sbjct: 1 MTNTKGKRRGTWSMFSRPFRKHGVIPLATYMRIYKKGDIVDIKGMGTFQKGMPHKCY 57
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 39/72 (54%), Positives = 47/72 (65%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G QKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTFQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVWIE 94
Query: 296 KISSSVSRKTCL 307
I S SR + L
Sbjct: 95 HIKHSKSRDSFL 106
>UNIPROTKB|J9NXT7 [details] [associations]
symbol:LOC478864 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OMA:GVIVYKV
EMBL:AAEX03016746 RefSeq:XP_003434068.1 Ensembl:ENSCAFT00000013992
GeneID:607788 KEGG:cfa:607788 Uniprot:J9NXT7
Length = 160
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
Score = 172 (65.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 40/81 (49%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+N TQHAVG++VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNDTQHAVGIVVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
>RGD|1562923 [details] [associations]
symbol:RGD1562923 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562923 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00196172
RefSeq:XP_001070972.1 RefSeq:XP_212786.1 PRIDE:D3ZEK2
Ensembl:ENSRNOT00000058595 GeneID:290825 KEGG:rno:290825
UCSC:RGD:1562923 CTD:290825 NextBio:631721 Uniprot:D3ZEK2
Length = 160
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
Score = 172 (65.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 33/53 (62%), Positives = 41/53 (77%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQKGMP K YHGKTGRV+NVTQH+VG+IVNK+V+ +I+ K
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKYYHGKTGRVYNVTQHSVGIIVNKQVKGKILAK 87
>RGD|2321582 [details] [associations]
symbol:LOC100364176 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:2321582 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981 OMA:NVSKHAL
OrthoDB:EOG4K6G5D IPI:IPI00400601 RefSeq:XP_002727250.1
RefSeq:XP_002730079.1 Ensembl:ENSRNOT00000049571 GeneID:100360604
KEGG:rno:100360604 Uniprot:D3ZPN7
Length = 160
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
Score = 172 (65.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKT RV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTRRVYNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
>UNIPROTKB|F1N7U3 [details] [associations]
symbol:Bt.86815 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:GVIVYKV EMBL:DAAA02053574
IPI:IPI00903844 Ensembl:ENSBTAT00000036093 NextBio:20871445
Uniprot:F1N7U3
Length = 160
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+V+ +I+ K E I S SR
Sbjct: 44 GMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRD 103
Query: 305 TCLAQFYVADGK 316
+ L + D K
Sbjct: 104 SFLKRVEEDDQK 115
Score = 166 (63.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGT +FSRPFR+HG +PL+ YM++Y+ GDIVDIK
Sbjct: 1 MTNTKGKRRGTCYMFSRPFRKHGVVPLATYMRIYRKGDIVDIK 43
>UNIPROTKB|G3V1B3 [details] [associations]
symbol:RPL21 "Ribosomal protein L21, isoform CRA_f"
species:9606 "Homo sapiens" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
EMBL:CH471075 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 UniGene:Hs.381123
UniGene:Hs.535873 HGNC:HGNC:10313 ChiTaRS:RPL21 EMBL:AL159977
ProteinModelPortal:G3V1B3 SMR:G3V1B3 PRIDE:G3V1B3
Ensembl:ENST00000461690 ArrayExpress:G3V1B3 Bgee:G3V1B3
Uniprot:G3V1B3
Length = 87
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
Score = 158 (60.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 30/45 (66%), Positives = 35/45 (77%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKR 284
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG++VNK+
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIVVNKQ 79
>WB|WBGene00004433 [details] [associations]
symbol:rpl-21 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0009792 GO:GO:0040007
GO:GO:0006915 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 EMBL:FO080531 eggNOG:COG2139 HOGENOM:HOG000194513
KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 PIR:S44757 RefSeq:NP_498774.1
ProteinModelPortal:P34334 SMR:P34334 DIP:DIP-24597N IntAct:P34334
MINT:MINT-1072893 STRING:P34334 PaxDb:P34334
EnsemblMetazoa:C14B9.7.1 EnsemblMetazoa:C14B9.7.2 GeneID:176146
KEGG:cel:CELE_C14B9.7 UCSC:C14B9.7.2 CTD:176146 WormBase:C14B9.7
InParanoid:P34334 NextBio:891328 Uniprot:P34334
Length = 161
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 34/61 (55%), Positives = 41/61 (67%)
Query: 250 HGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQ 309
+GA QKGMPFK YHG+TGR+FNVT+ AVG+IVNKRVR I+PK + C
Sbjct: 45 NGAFQKGMPFKAYHGRTGRIFNVTRGAVGIIVNKRVRGNILPKRINIRIEHIKPSKCRTD 104
Query: 310 F 310
F
Sbjct: 105 F 105
Score = 144 (55.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRM 409
MTNSKG RRGTR +F+R FR+HG LS Y YK GD+VDIK +F M
Sbjct: 1 MTNSKGLRRGTRYMFARDFRKHGVEHLSTYYTQYKRGDLVDIKTNGAFQKGM 52
>UNIPROTKB|P49666 [details] [associations]
symbol:RPL21 "60S ribosomal protein L21" species:9823 "Sus
scrofa" [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D
EMBL:F14727 ProteinModelPortal:P49666 SMR:P49666 STRING:P49666
Uniprot:P49666
Length = 62
Score = 177 (67.4 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/43 (72%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|1562971 [details] [associations]
symbol:RGD1562971 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562971 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00368302 Ensembl:ENSRNOT00000047249
UCSC:RGD:1562971 NextBio:688282 Uniprot:D3ZEP1
Length = 157
Score = 175 (66.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 34/53 (64%), Positives = 41/53 (77%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAK 87
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
M N+KG RRGTR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MMNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|1561815 [details] [associations]
symbol:RGD1561815 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1561815 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00210546 RefSeq:XP_001076371.1
RefSeq:XP_212947.1 PRIDE:D4A4G9 Ensembl:ENSRNOT00000050384
GeneID:295472 KEGG:rno:295472 UCSC:RGD:1561815 CTD:295472
NextBio:639640 Uniprot:D4A4G9
Length = 160
Score = 175 (66.7 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 42/81 (51%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKIPAKRINVWFE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 169 (64.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGT +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTWYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|1564634 [details] [associations]
symbol:RGD1564634 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1564634 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 IPI:IPI00957983
Ensembl:ENSRNOT00000046324 Uniprot:F1LY43
Length = 154
Score = 162 (62.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 36/72 (50%), Positives = 46/72 (63%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS----AE 295
K G + G G+VQKGMP K YH KTGRV+NVTQH VG+IVNK+++ + + K E
Sbjct: 29 KKGDIVDIKGMGSVQKGMPHKCYHSKTGRVYNVTQHDVGIIVNKQIKGKTLAKRINVRTE 88
Query: 296 KISSSVSRKTCL 307
I S SR + L
Sbjct: 89 HIKHSKSRDSFL 100
Score = 154 (59.3 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 34/76 (44%), Positives = 44/76 (57%)
Query: 365 RRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSPLTSFNHG 424
RRGT+ +FSRPFR+HG +PL+ YM++YK GDIVDIK S M Y S +
Sbjct: 2 RRGTQYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGSVQKGMPHKCYHSKTGRVYNV 61
Query: 425 IKPDPWFYVDVMGKGK 440
+ D V+ KGK
Sbjct: 62 TQHDVGIIVNKQIKGK 77
Score = 37 (18.1 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 643 KKVTRIGPKYQYQPVRDDIVGATLGKK 669
+K T + PK+Q P R+ T GK+
Sbjct: 115 EKGTWVQPKHQPAPPREAQFVRTNGKE 141
>RGD|1565370 [details] [associations]
symbol:RGD1565370 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1565370 RGD:2320219 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00389130
RefSeq:XP_212922.1 Ensembl:ENSRNOT00000041479 GeneID:294700
KEGG:rno:294700 UCSC:RGD:1565370 CTD:294700 NextBio:638437
Uniprot:D3ZPH0
Length = 160
Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHA G+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RR TR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|2320219 [details] [associations]
symbol:LOC100364846 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:1565370
RGD:2320219 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00389130
RefSeq:XP_212922.1 Ensembl:ENSRNOT00000041479 GeneID:294700
KEGG:rno:294700 UCSC:RGD:1565370 CTD:294700 NextBio:638437
Uniprot:D3ZPH0
Length = 160
Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHA G+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAEGIIVNKQVKGKILTKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RR TR +FSRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIK 43
>RGD|1565159 [details] [associations]
symbol:RGD1565159 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1565159 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00209623 RefSeq:XP_001053261.1
RefSeq:XP_227091.1 Ensembl:ENSRNOT00000049363 GeneID:310365
KEGG:rno:310365 CTD:310365 NextBio:661903 Uniprot:D4A219
Length = 160
Score = 174 (66.3 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS----AE 295
K G + G G VQKG+P K YHGKTGRV+NVTQHAVGV+VNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGIPHKCYHGKTGRVYNVTQHAVGVMVNKQVKGKILAKRINVRTE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKDNDQK 115
Score = 158 (60.7 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 28/43 (65%), Positives = 36/43 (83%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
M N+KG RRGT+ + SRPFR+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MRNTKGKRRGTQYMSSRPFRKHGVVPLATYMQIYKKGDIVDIK 43
>RGD|1564552 [details] [associations]
symbol:RGD1564552 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1564552 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00361923 RefSeq:XP_001068883.1
RefSeq:XP_212816.1 Ensembl:ENSRNOT00000050803 GeneID:291367
KEGG:rno:291367 UCSC:RGD:1564552 CTD:291367 NextBio:632502
Uniprot:D3ZIM9
Length = 160
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 40/72 (55%), Positives = 47/72 (65%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDVVDIKGMGTVQKGMPHKCYHGKTGRVCNVTQHAVGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCL 307
I S SR + L
Sbjct: 95 HIEHSKSRDSFL 106
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 29/43 (67%), Positives = 38/43 (88%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ +M++YK GD+VDIK
Sbjct: 1 MTNTKGKRRGTRCMFSRPFRKHGVVPLATHMRIYKKGDVVDIK 43
>UNIPROTKB|G5E6D6 [details] [associations]
symbol:G5E6D6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OMA:NVSKHAL GeneTree:ENSGT00390000001293 EMBL:DAAA02070079
Ensembl:ENSBTAT00000052276 NextBio:20926471 Uniprot:G5E6D6
Length = 160
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 39/72 (54%), Positives = 48/72 (66%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGMP K YHGKTGRV++VTQHAVG+IVNK+V+ +I+ K E I S SR
Sbjct: 44 GMGTVQKGMPHKCYHGKTGRVYSVTQHAVGIIVNKQVKGKILAKRINVRIEHIKHSKSRD 103
Query: 305 TCLAQFYVADGK 316
+ L + D K
Sbjct: 104 SFLKRVKENDQK 115
Score = 162 (62.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 28/43 (65%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG R+GT +FSRPFR+HG +PL+ YM++Y+ GDIVDIK
Sbjct: 1 MTNTKGKRQGTCYMFSRPFRKHGVVPLATYMRIYRKGDIVDIK 43
>RGD|1561957 [details] [associations]
symbol:RGD1561957 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1561957 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00368433 Ensembl:ENSRNOT00000040493 UCSC:RGD:1561957
NextBio:659603 Uniprot:D3ZKL4
Length = 160
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 33/66 (50%), Positives = 46/66 (69%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MTN+KG RRGT+ +FSRPFR+HG +PL+ YM++YK GDIVDIK + M+ +C +
Sbjct: 1 MTNTKGKRRGTQYMFSRPFRKHGVVPLTTYMQIYKKGDIVDIKGMGTVQKGMSHKCYHGK 60
Query: 417 PLTSFN 422
+N
Sbjct: 61 TRRVYN 66
Score = 161 (61.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 40/81 (49%), Positives = 48/81 (59%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGM K YHGKT RV+NVTQHA+G+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMSHKCYHGKTRRVYNVTQHALGIIVNKQVKGKIMAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR L Q D K
Sbjct: 95 HIKHSKSRDGFLKQVKENDQK 115
>RGD|1589437 [details] [associations]
symbol:LOC680639 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1589437 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00391774
RefSeq:XP_003749224.1 RefSeq:XP_003753561.1
Ensembl:ENSRNOT00000048123 GeneID:100909610 KEGG:rno:100909610
Uniprot:D3ZPU6
Length = 160
Score = 173 (66.0 bits), Expect = 6.5e-12, P = 6.5e-12
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MTN+KG RR TR +FSRPFR+HG +PL+ YM++YK GDIVDIK + M +C +
Sbjct: 1 MTNTKGKRRSTRYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHKCYHGK 60
Query: 417 PLTSFN 422
+ +N
Sbjct: 61 NIRVYN 66
Score = 159 (61.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 39/81 (48%), Positives = 48/81 (59%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGK RV+NVTQHA G+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHKCYHGKNIRVYNVTQHAEGIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 HIKHSKSRDSFLKRVKENDQK 115
>RGD|1562929 [details] [associations]
symbol:RGD1562929 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1562929 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00363559 RefSeq:XP_001055652.1
RefSeq:XP_237550.1 PRIDE:D3ZPV5 Ensembl:ENSRNOT00000056321
GeneID:316745 KEGG:rno:316745 UCSC:RGD:1562929 CTD:316745
NextBio:671209 Uniprot:D3ZPV5
Length = 160
Score = 172 (65.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 33/56 (58%), Positives = 43/56 (76%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
R +K G + G G V+KGMP K YHGKTGRV+NVTQHAVG+IVN++V+ +I+ K
Sbjct: 32 RIRKKGDIVDIKGMGTVEKGMPHKCYHGKTGRVYNVTQHAVGIIVNEQVKGKILAK 87
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++ K GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIRKKGDIVDIK 43
>RGD|1561875 [details] [associations]
symbol:RGD1561875 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1561875 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00205553 RefSeq:XP_001075345.1
RefSeq:XP_212946.1 Ensembl:ENSRNOT00000050291 GeneID:295439
KEGG:rno:295439 CTD:295439 NextBio:639565 Uniprot:D3ZHP4
Length = 160
Score = 172 (65.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR HG IPL+ Y+++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRNHGVIPLATYIRIYKKGDIVDIK 43
Score = 162 (62.1 bits), Expect = 9.7e-11, P = 9.7e-11
Identities = 32/53 (60%), Positives = 38/53 (71%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G QKGMP K YHGKTGR +NVTQHAVG+IVNK+V+ +I K
Sbjct: 35 KKGDIVDIKGMGTAQKGMPHKCYHGKTGRAYNVTQHAVGIIVNKQVKGKIPAK 87
>RGD|1566270 [details] [associations]
symbol:RGD1566270 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1566270 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00362290
RefSeq:XP_001060499.1 RefSeq:XP_212974.1 Ensembl:ENSRNOT00000048356
GeneID:296502 KEGG:rno:296502 UCSC:RGD:1566270 CTD:296502
NextBio:641302 Uniprot:D4A4G7
Length = 160
Score = 172 (65.6 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 41/81 (50%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP K YHGKTGRV+NVTQHAV +IVNK+V+ +I+ K E
Sbjct: 35 KKGGMVDIKGMGTVQKGMPHKCYHGKTGRVYNVTQHAVDIIVNKQVKGKILAKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 95 YIKHSKSRDSFLKRVKENDQK 115
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 27/43 (62%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGT+ +FSRPFR+HG +PL+ Y+++YK G +VDIK
Sbjct: 1 MTNTKGKRRGTQYMFSRPFRKHGVVPLATYLRIYKKGGMVDIK 43
>UNIPROTKB|J9NZU6 [details] [associations]
symbol:J9NZU6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03007785
Ensembl:ENSCAFT00000001596 OMA:RIERIKH Uniprot:J9NZU6
Length = 118
Score = 171 (65.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 38/72 (52%), Positives = 48/72 (66%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGMP K YHGKTGRV++VTQHAVG++VNK+V+ +I+ K E I S SR
Sbjct: 2 GMGTVQKGMPHKCYHGKTGRVYSVTQHAVGIVVNKQVKGKILAKRINVRIEHIKHSKSRG 61
Query: 305 TCLAQFYVADGK 316
+ L + D K
Sbjct: 62 SFLKRVKENDQK 73
>RGD|2322974 [details] [associations]
symbol:LOC100363471 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 RGD:2322974
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00196783
PRIDE:D3ZUH0 Ensembl:ENSRNOT00000052088 UCSC:RGD:2322974
Uniprot:D3ZUH0
Length = 160
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MTN+KG RRGT +FSRPFR+HG +PL+ YM++YK GDIVDIK + M EC +
Sbjct: 1 MTNTKGKRRGTWYMFSRPFRKHGVVPLATYMRIYKKGDIVDIKGMGTVQKGMPHECYHGK 60
Query: 417 PLTSFN 422
+N
Sbjct: 61 TGKVYN 66
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/81 (49%), Positives = 50/81 (61%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKGMP + YHGKTG+V+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKGMPHECYHGKTGKVYNVTQHAVGIIVNKQVKGKILAKRISVWIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR L + D K
Sbjct: 95 HIKHSKSRDGFLKRVKENDQK 115
>RGD|2321746 [details] [associations]
symbol:LOC100360611 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:2321746 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00361465
RefSeq:XP_002724809.1 RefSeq:XP_002727949.1
Ensembl:ENSRNOT00000051772 GeneID:100360611 KEGG:rno:100360611
UCSC:RGD:2321746 Uniprot:D4A7B4
Length = 160
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+HG +PL+ YM++YK DIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKHGVVPLATYMRIYKKDDIVDIK 43
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 39/72 (54%), Positives = 47/72 (65%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGMP K YHGKT RV+NVTQHAVG+IVNK+V+ +I+ K E I S SR
Sbjct: 44 GMGTVQKGMPHKCYHGKTRRVYNVTQHAVGIIVNKQVKGKILAKRINVRIEYIKHSKSRD 103
Query: 305 TCLAQFYVADGK 316
+ L + D K
Sbjct: 104 SFLNRVKENDQK 115
>UNIPROTKB|F1MUN0 [details] [associations]
symbol:F1MUN0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:DAAA02032091 EMBL:DAAA02032092
IPI:IPI00722898 PRIDE:F1MUN0 Ensembl:ENSBTAT00000001088
NextBio:20898920 Uniprot:F1MUN0
Length = 159
Score = 170 (64.9 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 40/79 (50%), Positives = 50/79 (63%)
Query: 242 GRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKI 297
G +G G VQKGMP K YHGKTGRV+NVTQHAVG+IVNK+V+ +I+ K + I
Sbjct: 36 GDIVGIKGMVTVQKGMPHKCYHGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINVRIKHI 95
Query: 298 SSSVSRKTCLAQFYVADGK 316
S SR + L + D K
Sbjct: 96 KHSKSRDSFLKRVKENDQK 114
Score = 153 (58.9 bits), Expect = 8.9e-10, P = 8.9e-10
Identities = 29/43 (67%), Positives = 36/43 (83%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSR FR+HG +PL+ YM++YK GDIV IK
Sbjct: 1 MTNTKGKRRGTRYMFSRTFRKHGGVPLATYMRIYK-GDIVGIK 42
>RGD|1559531 [details] [associations]
symbol:RGD1559531 "similar to 60S ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1559531 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00388220 Ensembl:ENSRNOT00000048673 UCSC:RGD:1559531
NextBio:633440 Uniprot:D3ZQ96
Length = 155
Score = 169 (64.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/66 (51%), Positives = 45/66 (68%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MTN+K RRGTR +FSRPFR+HG +PL YM++YK GDIVDIK + MT +C +
Sbjct: 1 MTNTKVKRRGTRYVFSRPFRKHGVVPLVTYMRLYKKGDIVDIKGMGAAQKGMTHKCYHGK 60
Query: 417 PLTSFN 422
+ +N
Sbjct: 61 TVRVYN 66
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 42/84 (50%), Positives = 50/84 (59%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA-- 294
R K G + G GA QKGM K YHGKT RV+NVTQHAVG+IVNK+V+ +I+ K
Sbjct: 32 RLYKKGDIVDIKGMGAAQKGMTHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAKRINV 91
Query: 295 --EKISSSVSRKTCLAQFYVADGK 316
E I S SR + L Q D K
Sbjct: 92 WIEHIKHSKSRDSFLKQVKENDQK 115
>UNIPROTKB|F1LWH4 [details] [associations]
symbol:F1LWH4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 IPI:IPI00390548
Ensembl:ENSRNOT00000049138 Uniprot:F1LWH4
Length = 160
Score = 169 (64.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 30/43 (69%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
+TN+KG RRGTR +FSRPFR+HG +PL+ YM +YK GDIVDIK
Sbjct: 1 ITNTKGKRRGTRYMFSRPFRKHGVVPLATYMGIYKKGDIVDIK 43
Score = 167 (63.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 40/81 (49%), Positives = 49/81 (60%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G VQKG+P K YHGKT RV+NVTQHAVG+IVNK+V+ + + K E
Sbjct: 35 KKGDIVDIKGMGTVQKGIPHKCYHGKTERVYNVTQHAVGIIVNKQVKGKFLVKRINVRIE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L Q D K
Sbjct: 95 HIKHSKSRDSFLKQVKENDQK 115
>WB|WBGene00022455 [details] [associations]
symbol:Y110A7A.4 species:6239 "Caenorhabditis elegans"
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0006231 "dTMP biosynthetic process" evidence=IEA;IDA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0009792
GO:GO:0010171 EMBL:FO080728 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
OMA:DTNVAYL HSSP:P04818 GeneTree:ENSGT00390000014786
RefSeq:NP_491532.3 ProteinModelPortal:Q9N588 SMR:Q9N588
STRING:Q9N588 PaxDb:Q9N588 EnsemblMetazoa:Y110A7A.4 GeneID:172149
KEGG:cel:CELE_Y110A7A.4 UCSC:Y110A7A.4 CTD:172149
WormBase:Y110A7A.4 InParanoid:Q9N588 NextBio:874229
ArrayExpress:Q9N588 Uniprot:Q9N588
Length = 312
Score = 185 (70.2 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 35/47 (74%), Positives = 41/47 (87%)
Query: 307 LAQFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
+ QFYV +G+LSCQLYQRS DMGLGVPFN+ASY LLT+MIA V GL+
Sbjct: 197 MCQFYVDNGELSCQLYQRSGDMGLGVPFNLASYGLLTHMIAKVCGLK 243
>UNIPROTKB|P67044 [details] [associations]
symbol:thyA "Thymidylate synthase" species:1773
"Mycobacterium tuberculosis" [GO:0004799 "thymidylate synthase
activity" evidence=IDA] [GO:0006231 "dTMP biosynthetic process"
evidence=IDA] [GO:0046079 "dUMP catabolic process" evidence=IDA]
HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
GO:GO:0046079 eggNOG:COG0207 HOGENOM:HOG000257899 KO:K00560
OMA:DTNVAYL ProtClustDB:PRK01827 PIR:C70881 RefSeq:NP_217280.1
RefSeq:NP_337339.1 RefSeq:YP_006516209.1 PDB:3QJ7 PDBsum:3QJ7
ProteinModelPortal:P67044 SMR:P67044 PRIDE:P67044
EnsemblBacteria:EBMYCT00000000138 EnsemblBacteria:EBMYCT00000070853
GeneID:13319492 GeneID:887728 GeneID:925453 KEGG:mtc:MT2834
KEGG:mtu:Rv2764c KEGG:mtv:RVBD_2764c PATRIC:18127984
TubercuList:Rv2764c BioCyc:MetaCyc:MONOMER-15786 BindingDB:P67044
ChEMBL:CHEMBL1795162 Uniprot:P67044
Length = 263
Score = 180 (68.4 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 35/44 (79%), Positives = 40/44 (90%)
Query: 309 QFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 352
QFYVADG+LSCQLYQRSAD+ LGVPFNIASY+LLT+M+A GL
Sbjct: 151 QFYVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGL 194
>RGD|1566326 [details] [associations]
symbol:RGD1566326 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
RGD:1566326 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00206537 RefSeq:XP_001078943.1
RefSeq:XP_212960.1 Ensembl:ENSRNOT00000051901 GeneID:295941
KEGG:rno:295941 UCSC:RGD:1566326 CTD:295941 NextBio:640359
Uniprot:D3ZE97
Length = 160
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 31/43 (72%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSRPFR+ G IPL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRPFRKPGVIPLATYMRIYKKGDIVDIK 43
Score = 165 (63.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 38/72 (52%), Positives = 46/72 (63%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS----AE 295
K G + G G VQKGMP Y GKTGRV+NVTQHAVG+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGIGTVQKGMPHNCYQGKTGRVYNVTQHAVGIIVNKQVKGKILAKRINGRTE 94
Query: 296 KISSSVSRKTCL 307
I S SR + L
Sbjct: 95 HIKHSKSRDSFL 106
>UNIPROTKB|J9NYS9 [details] [associations]
symbol:J9NYS9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OMA:KQVRNRI EMBL:AAEX03014640
Ensembl:ENSCAFT00000024619 Uniprot:J9NYS9
Length = 137
Score = 167 (63.8 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 30/44 (68%), Positives = 37/44 (84%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
G G VQKGMP K YHGKTGRV+NVTQHA G++VNK+V+ +I+ K
Sbjct: 21 GMGTVQKGMPHKCYHGKTGRVYNVTQHAFGIVVNKQVKGKILAK 64
>RGD|2318391 [details] [associations]
symbol:LOC100365794 "ribosomal protein L21-like" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:2318391 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00568610 PRIDE:F1LV39 Ensembl:ENSRNOT00000044093
Uniprot:F1LV39
Length = 160
Score = 166 (63.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 32/57 (56%), Positives = 42/57 (73%)
Query: 359 TNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVY 414
TN+KG RRGTR +FSRPFR+HG +PL+ +M+ YK GDIVDIK + RM +C +
Sbjct: 2 TNTKGKRRGTRYMFSRPFRKHGVVPLATHMQTYKKGDIVDIKGMGTVQKRMPLKCYH 58
Score = 159 (61.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 39/81 (48%), Positives = 47/81 (58%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS----AE 295
K G + G G VQK MP K YHGKTG+V NVTQHA G+IVNK+V+ +I+ K E
Sbjct: 35 KKGDIVDIKGMGTVQKRMPLKCYHGKTGKVCNVTQHAAGIIVNKQVKGKILAKRINVRTE 94
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR L + D K
Sbjct: 95 HIKHSKSRDGFLKRVKENDQK 115
>UNIPROTKB|D4A4U4 [details] [associations]
symbol:D4A4U4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00557251 Ensembl:ENSRNOT00000012902 Uniprot:D4A4U4
Length = 155
Score = 165 (63.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 29/43 (67%), Positives = 37/43 (86%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSR FR+HG +PL+ Y+++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSRSFRKHGVVPLATYIRIYKKGDIVDIK 43
Score = 149 (57.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 31/53 (58%), Positives = 39/53 (73%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQKG+P K YHGKTGRV+NV QHAV +IVNK+V+ +I+ K
Sbjct: 35 KKGDIVDIKGMGTVQKGIPHKCYHGKTGRVYNV-QHAVRIIVNKQVKGKILAK 86
>UNIPROTKB|F1PL86 [details] [associations]
symbol:F1PL86 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03010901
Ensembl:ENSCAFT00000002445 OMA:RISVWIE Uniprot:F1PL86
Length = 156
Score = 165 (63.1 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQKGMP K YHGK+GRV+N TQHAVG++VNK+V+ +I+ K
Sbjct: 31 KKGDIVDIKGMGVVQKGMPHKCYHGKSGRVYNFTQHAVGIVVNKQVKGKILAK 83
Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRGTR +FSR HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRGTRYMFSR----HGVVPLATYMRIYKKGDIVDIK 39
>TAIR|locus:2012275 [details] [associations]
symbol:AT1G09590 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005730 GO:GO:0006412
EMBL:AC003970 GO:GO:0003735 EMBL:AC000132 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 EMBL:AF370227 EMBL:AY059119
EMBL:BT000775 EMBL:AY059923 EMBL:AY081656 IPI:IPI00530029
PIR:G86230 RefSeq:NP_563847.1 RefSeq:NP_563849.1 UniGene:At.23363
UniGene:At.42214 ProteinModelPortal:Q43291 SMR:Q43291 STRING:Q43291
PRIDE:Q43291 EnsemblPlants:AT1G09590.1 EnsemblPlants:AT1G09690.1
GeneID:837486 GeneID:837497 KEGG:ath:AT1G09590 KEGG:ath:AT1G09690
GeneFarm:250 TAIR:At1g09590 TAIR:At1g09690 eggNOG:COG2139
HOGENOM:HOG000194513 InParanoid:Q43291 KO:K02889 OMA:TRYMFAR
PhylomeDB:Q43291 ProtClustDB:PLN00190 Genevestigator:Q43291
GermOnline:AT1G09590 PANTHER:PTHR20981 Uniprot:Q43291
Length = 164
Score = 164 (62.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEK 296
R K G Y+ +GA+ KGMP K YHG+TGR++NVT+ AVGV VNK++ RII K
Sbjct: 32 RTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHV 91
Query: 297 ISSSVSRKTCLAQF 310
V + C +F
Sbjct: 92 RVEHVQQSRCAEEF 105
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K + + M Y
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFY 57
>TAIR|locus:2024387 [details] [associations]
symbol:AT1G09690 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 GO:GO:0005730 GO:GO:0006412
EMBL:AC003970 GO:GO:0003735 EMBL:AC000132 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 EMBL:AF370227 EMBL:AY059119
EMBL:BT000775 EMBL:AY059923 EMBL:AY081656 IPI:IPI00530029
PIR:G86230 RefSeq:NP_563847.1 RefSeq:NP_563849.1 UniGene:At.23363
UniGene:At.42214 ProteinModelPortal:Q43291 SMR:Q43291 STRING:Q43291
PRIDE:Q43291 EnsemblPlants:AT1G09590.1 EnsemblPlants:AT1G09690.1
GeneID:837486 GeneID:837497 KEGG:ath:AT1G09590 KEGG:ath:AT1G09690
GeneFarm:250 TAIR:At1g09590 TAIR:At1g09690 eggNOG:COG2139
HOGENOM:HOG000194513 InParanoid:Q43291 KO:K02889 OMA:TRYMFAR
PhylomeDB:Q43291 ProtClustDB:PLN00190 Genevestigator:Q43291
GermOnline:AT1G09590 PANTHER:PTHR20981 Uniprot:Q43291
Length = 164
Score = 164 (62.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEK 296
R K G Y+ +GA+ KGMP K YHG+TGR++NVT+ AVGV VNK++ RII K
Sbjct: 32 RTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHV 91
Query: 297 ISSSVSRKTCLAQF 310
V + C +F
Sbjct: 92 RVEHVQQSRCAEEF 105
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K + + M Y
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFY 57
>TAIR|locus:2206480 [details] [associations]
symbol:AT1G57660 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 EMBL:AC079733
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:AC079732 GO:GO:0022625
eggNOG:COG2139 HOGENOM:HOG000194513 KO:K02889 ProtClustDB:PLN00190
PANTHER:PTHR20981 EMBL:AY050840 EMBL:AY091167 EMBL:BT004794
EMBL:AY086851 EMBL:F20014 IPI:IPI00525678 PIR:H96610
RefSeq:NP_564724.1 RefSeq:NP_564726.1 UniGene:At.21612
UniGene:At.48314 UniGene:At.67877 ProteinModelPortal:Q9FDZ9
SMR:Q9FDZ9 STRING:Q9FDZ9 PRIDE:Q9FDZ9 EnsemblPlants:AT1G57660.1
EnsemblPlants:AT1G57860.1 GeneID:842142 GeneID:842161
KEGG:ath:AT1G57660 KEGG:ath:AT1G57860 GeneFarm:251 TAIR:At1g57660
TAIR:At1g57860 InParanoid:Q9FDZ9 OMA:NVSKHAL PhylomeDB:Q9FDZ9
Genevestigator:Q9FDZ9 GermOnline:AT1G57660 Uniprot:Q9FDZ9
Length = 164
Score = 164 (62.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEK 296
R K G Y+ +GA+ KGMP K YHG+TGR++NVT+ AVGV VNK++ RII K
Sbjct: 32 RTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHV 91
Query: 297 ISSSVSRKTCLAQF 310
V + C +F
Sbjct: 92 RVEHVQQSRCAEEF 105
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K + + M Y
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFY 57
>TAIR|locus:2009410 [details] [associations]
symbol:AT1G57860 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0006412 GO:GO:0003735 EMBL:AC079733
InterPro:IPR008991 SUPFAM:SSF50104 EMBL:AC079732 GO:GO:0022625
eggNOG:COG2139 HOGENOM:HOG000194513 KO:K02889 ProtClustDB:PLN00190
PANTHER:PTHR20981 EMBL:AY050840 EMBL:AY091167 EMBL:BT004794
EMBL:AY086851 EMBL:F20014 IPI:IPI00525678 PIR:H96610
RefSeq:NP_564724.1 RefSeq:NP_564726.1 UniGene:At.21612
UniGene:At.48314 UniGene:At.67877 ProteinModelPortal:Q9FDZ9
SMR:Q9FDZ9 STRING:Q9FDZ9 PRIDE:Q9FDZ9 EnsemblPlants:AT1G57660.1
EnsemblPlants:AT1G57860.1 GeneID:842142 GeneID:842161
KEGG:ath:AT1G57660 KEGG:ath:AT1G57860 GeneFarm:251 TAIR:At1g57660
TAIR:At1g57860 InParanoid:Q9FDZ9 OMA:NVSKHAL PhylomeDB:Q9FDZ9
Genevestigator:Q9FDZ9 GermOnline:AT1G57660 Uniprot:Q9FDZ9
Length = 164
Score = 164 (62.8 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEK 296
R K G Y+ +GA+ KGMP K YHG+TGR++NVT+ AVGV VNK++ RII K
Sbjct: 32 RTFKVGDYVDVKVNGAIHKGMPHKFYHGRTGRIWNVTKRAVGVEVNKQIGNRIIRKRIHV 91
Query: 297 ISSSVSRKTCLAQF 310
V + C +F
Sbjct: 92 RVEHVQQSRCAEEF 105
Score = 136 (52.9 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 27/57 (47%), Positives = 35/57 (61%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M G R TRDLF+RPFR+ G IPLS Y++ +KVGD VD+K + + M Y
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFY 57
>UNIPROTKB|F1MSB9 [details] [associations]
symbol:F1MSB9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 Pfam:PF01157
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
EMBL:DAAA02028569 IPI:IPI00842185 PRIDE:F1MSB9
Ensembl:ENSBTAT00000019522 NextBio:20899973 Uniprot:F1MSB9
Length = 160
Score = 161 (61.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 32/53 (60%), Positives = 39/53 (73%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQ GMP K YHGKT RV+NVTQHAVG+IVNK+V+ +I+ K
Sbjct: 35 KEGDIVDIKGMGTVQNGMPHKCYHGKTVRVYNVTQHAVGIIVNKQVKGKILAK 87
Score = 146 (56.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MT++KG RRGT ++ SR FR+HG +PL+ Y+ +YK GDIVDIK + + M +C +
Sbjct: 1 MTDTKGTRRGTCNMSSRSFRKHGIVPLATYVIIYKEGDIVDIKGMGTVQNGMPHKCYHGK 60
Query: 417 PLTSFN 422
+ +N
Sbjct: 61 TVRVYN 66
>UNIPROTKB|F1M081 [details] [associations]
symbol:F1M081 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00949634 Ensembl:ENSRNOT00000048828 Uniprot:F1M081
Length = 142
Score = 160 (61.4 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/44 (65%), Positives = 38/44 (86%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
G G+VQKGMP K YH KTGRV++VTQHA+G+IVNK+V+ +I+ K
Sbjct: 31 GTGSVQKGMPHKCYHSKTGRVYDVTQHAMGIIVNKQVKGKILAK 74
>RGD|1563048 [details] [associations]
symbol:RGD1563048 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1563048 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 OMA:KENDQKQ IPI:IPI00566561
Ensembl:ENSRNOT00000042722 Uniprot:F1LV87
Length = 130
Score = 159 (61.0 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 36/68 (52%), Positives = 44/68 (64%)
Query: 253 VQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK----SAEKISSSVSRKTCLA 308
VQKGMP K YHGK GRV+NVTQHAVG+IVN +V+ +I+ K E I S SR + L
Sbjct: 18 VQKGMPHKCYHGKIGRVYNVTQHAVGIIVNNQVKGKILAKRFNVQTEHIKHSKSRDSFLK 77
Query: 309 QFYVADGK 316
+ D K
Sbjct: 78 RVKENDQK 85
>TIGR_CMR|SO_1335 [details] [associations]
symbol:SO_1335 "thymidylate synthase" species:211586
"Shewanella oneidensis MR-1" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009157 "deoxyribonucleoside
monophosphate biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_716955.1 ProteinModelPortal:Q8EH94 SMR:Q8EH94
GeneID:1169156 KEGG:son:SO_1335 PATRIC:23522326 Uniprot:Q8EH94
Length = 264
Score = 171 (65.3 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 41/96 (42%), Positives = 58/96 (60%)
Query: 256 GMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISS--SVSRKTCLA--QFY 311
G ++ + ++G + + I ++ R+I SA + ++ C A QFY
Sbjct: 95 GAQWRSWPTQSGEAIDQISQVIAQIKSQPDSRRLIV-SAWNVGELDKMALAPCHAFFQFY 153
Query: 312 VADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIA 347
VADGKLSCQLYQRS D+ LG+PFNIASY+LLT M+A
Sbjct: 154 VADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVA 189
>DICTYBASE|DDB_G0279387 [details] [associations]
symbol:rpl21 "S60 ribosomal protein L21"
species:44689 "Dictyostelium discoideum" [GO:0009617 "response to
bacterium" evidence=IEP] [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
dictyBase:DDB_G0279387 GO:GO:0009617 GenomeReviews:CM000152_GR
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:AAFI02000030
InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139 KO:K02889
PANTHER:PTHR20981 RefSeq:XP_641724.1 ProteinModelPortal:Q54X53
SMR:Q54X53 STRING:Q54X53 EnsemblProtists:DDB0229962 GeneID:8621919
KEGG:ddi:DDB_G0279387 OMA:NDAARHE ProtClustDB:PTZ00189
Uniprot:Q54X53
Length = 160
Score = 156 (60.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 237 RKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEK 296
R + G Y+ G V KGMP K YHG+TGRV+NVT AVGVI+NKRV RII K
Sbjct: 32 RTFRLGDYVDIKATGNVHKGMPHKFYHGRTGRVWNVTPRAVGVIINKRVGPRIIAKKIHV 91
Query: 297 ISSSVSRKTCLA 308
+ V +A
Sbjct: 92 RTEHVKPSNSMA 103
Score = 109 (43.4 bits), Expect = 0.00053, P = 0.00053
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M +S G R TR LFSR FR HG + + +++ +++GD VDIK + + M Y
Sbjct: 1 MPHSFGLRARTRYLFSRGFRNHGLLQTTTFLRTFRLGDYVDIKATGNVHKGMPHKFY 57
>RGD|1566281 [details] [associations]
symbol:RGD1566281 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1566281 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 IPI:IPI00767177 Ensembl:ENSRNOT00000048719
ArrayExpress:F1M5C7 Uniprot:F1M5C7
Length = 128
Score = 156 (60.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 38/81 (46%), Positives = 47/81 (58%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G G +QKGMP K YHGK RV+NVTQHAV +IVNK+V+ +I+ K E
Sbjct: 3 KKGDIVDIKGMGTIQKGMPHKCYHGKIRRVYNVTQHAVCIIVNKQVKGKILAKRINVRIE 62
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L D K
Sbjct: 63 HIKQSKSRDSFLKHVKENDQK 83
>TIGR_CMR|CBU_1547 [details] [associations]
symbol:CBU_1547 "thymidylate synthase" species:227377
"Coxiella burnetii RSA 493" [GO:0004799 "thymidylate synthase
activity" evidence=ISS] [GO:0009265 "2'-deoxyribonucleotide
biosynthetic process" evidence=ISS] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
RefSeq:NP_820530.1 ProteinModelPortal:Q83BG2 SMR:Q83BG2
GeneID:1209457 KEGG:cbu:CBU_1547 PATRIC:17931857
BioCyc:CBUR227377:GJ7S-1527-MONOMER Uniprot:Q83BG2
Length = 264
Score = 169 (64.5 bits), Expect = 5.9e-10, P = 5.9e-10
Identities = 45/102 (44%), Positives = 58/102 (56%)
Query: 256 GMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISS--SVSRKTC--LAQFY 311
G ++ +H GR + Q + I R+I SA + ++ C L QFY
Sbjct: 95 GKQWRRWHCPDGRTVDQMQRLIREIKTNPDSRRLIV-SAWNVGELDQMALPPCHLLFQFY 153
Query: 312 VADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
VADG LSC+L QRSAD LGVPFNIASYSLLT++IA L+
Sbjct: 154 VADGFLSCKLTQRSADAFLGVPFNIASYSLLTHLIARQCNLK 195
>UNIPROTKB|F1LVT4 [details] [associations]
symbol:LOC691365 "Protein LOC691365" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001147 Pfam:PF01157
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 IPI:IPI00763171
Ensembl:ENSRNOT00000041159 OMA:NITQHAM Uniprot:F1LVT4
Length = 128
Score = 152 (58.6 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 36/81 (44%), Positives = 47/81 (58%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS----AE 295
K G + G G VQKGMP K YH KT RV+N+TQHA+G+IV K+V+ + + K E
Sbjct: 3 KKGDIVDIKGMGTVQKGMPHKCYHSKTRRVYNITQHAMGIIVKKQVKGKTLAKRINVRTE 62
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR + L + D K
Sbjct: 63 HIKHSKSRDSFLKRVKENDQK 83
>UNIPROTKB|P0A884 [details] [associations]
symbol:thyA "thymidylate synthase" species:83333
"Escherichia coli K-12" [GO:0006231 "dTMP biosynthetic process"
evidence=IEA] [GO:0006235 "dTTP biosynthetic process" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303 PRINTS:PR00108
PROSITE:PS00091 UniPathway:UPA00575 GO:GO:0005737 GO:GO:0006417
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U29581 GO:GO:0003723 GO:GO:0006231
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:X03966 GO:GO:0006235 EMBL:J01710
eggNOG:COG0207 KO:K00560 OMA:DTNVAYL ProtClustDB:PRK01827
HOGENOM:HOG000257900 PIR:A00549 RefSeq:NP_417304.1
RefSeq:YP_491032.1 PDB:1AIQ PDB:1AJM PDB:1AN5 PDB:1AOB PDB:1AXW
PDB:1BDU PDB:1BID PDB:1BJG PDB:1BQ1 PDB:1BQ2 PDB:1DDU PDB:1DNA
PDB:1EV5 PDB:1EV8 PDB:1EVF PDB:1EVG PDB:1F4B PDB:1F4C PDB:1F4D
PDB:1F4E PDB:1F4F PDB:1F4G PDB:1FFL PDB:1FWM PDB:1JG0 PDB:1JTQ
PDB:1JTU PDB:1JUT PDB:1KCE PDB:1KZI PDB:1KZJ PDB:1NCE PDB:1QQQ
PDB:1SYN PDB:1TDU PDB:1TJS PDB:1TLC PDB:1TLS PDB:1TRG PDB:1TSD
PDB:1TSN PDB:1TYS PDB:1ZPR PDB:2A9W PDB:2BBQ PDB:2FTN PDB:2FTO
PDB:2FTQ PDB:2G8O PDB:2G8X PDB:2KCE PDB:2TSC PDB:2VET PDB:2VF0
PDB:3B5B PDB:3B9H PDB:3BFI PDB:3BGX PDB:3BHL PDB:3BHR PDB:3TMS
PDB:4F2V PDB:4GEV PDBsum:1AIQ PDBsum:1AJM PDBsum:1AN5 PDBsum:1AOB
PDBsum:1AXW PDBsum:1BDU PDBsum:1BID PDBsum:1BJG PDBsum:1BQ1
PDBsum:1BQ2 PDBsum:1DDU PDBsum:1DNA PDBsum:1EV5 PDBsum:1EV8
PDBsum:1EVF PDBsum:1EVG PDBsum:1F4B PDBsum:1F4C PDBsum:1F4D
PDBsum:1F4E PDBsum:1F4F PDBsum:1F4G PDBsum:1FFL PDBsum:1FWM
PDBsum:1JG0 PDBsum:1JTQ PDBsum:1JTU PDBsum:1JUT PDBsum:1KCE
PDBsum:1KZI PDBsum:1KZJ PDBsum:1NCE PDBsum:1QQQ PDBsum:1SYN
PDBsum:1TDU PDBsum:1TJS PDBsum:1TLC PDBsum:1TLS PDBsum:1TRG
PDBsum:1TSD PDBsum:1TSN PDBsum:1TYS PDBsum:1ZPR PDBsum:2A9W
PDBsum:2BBQ PDBsum:2FTN PDBsum:2FTO PDBsum:2FTQ PDBsum:2G8O
PDBsum:2G8X PDBsum:2KCE PDBsum:2TSC PDBsum:2VET PDBsum:2VF0
PDBsum:3B5B PDBsum:3B9H PDBsum:3BFI PDBsum:3BGX PDBsum:3BHL
PDBsum:3BHR PDBsum:3TMS PDBsum:4F2V PDBsum:4GEV
ProteinModelPortal:P0A884 SMR:P0A884 DIP:DIP-48261N IntAct:P0A884
MINT:MINT-1265510 PRIDE:P0A884 EnsemblBacteria:EBESCT00000001730
EnsemblBacteria:EBESCT00000017304 GeneID:12933064 GeneID:949035
KEGG:ecj:Y75_p2761 KEGG:eco:b2827 PATRIC:32121072 EchoBASE:EB0995
EcoGene:EG11002 BioCyc:EcoCyc:THYMIDYLATESYN-MONOMER
BioCyc:ECOL316407:JW2795-MONOMER
BioCyc:MetaCyc:THYMIDYLATESYN-MONOMER SABIO-RK:P0A884
BindingDB:P0A884 ChEMBL:CHEMBL2555 EvolutionaryTrace:P0A884
Genevestigator:P0A884 Uniprot:P0A884
Length = 264
Score = 166 (63.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 309 QFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
QFYVADGKLSCQLYQRS D+ LG+PFNIASY+LL +M+A L+
Sbjct: 151 QFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLE 195
>UNIPROTKB|D4A9T8 [details] [associations]
symbol:D4A9T8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00205341
Ensembl:ENSRNOT00000021161 Uniprot:D4A9T8
Length = 161
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RRG+ L SRPF HG +PL+ YM++YK GDI+DIK
Sbjct: 1 MTNTKGKRRGSWCLLSRPFSNHGVVPLATYMQIYKKGDIIDIK 43
Score = 144 (55.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGR-VFNVTQHAVGVIVNKRVRTRIIPK 292
K G + G G VQKGMP K YHGKT +NVTQ+AVG+IVNK+V+ +I+ K
Sbjct: 35 KKGDIIDIKGMGTVQKGMPHKCYHGKTEESTYNVTQYAVGIIVNKQVKGKILAK 88
>UNIPROTKB|F1LXP6 [details] [associations]
symbol:F1LXP6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00568095 Ensembl:ENSRNOT00000049422 Uniprot:F1LXP6
Length = 123
Score = 149 (57.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 253 VQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRKTCLA 308
VQK MP YH KTGRV+NVTQHA+G+IVNK+V+ +I+ K E+I S SR + L
Sbjct: 16 VQKRMPHYCYHSKTGRVYNVTQHALGIIVNKQVKGKILAKRINVRIEQIKHSKSRDSFLK 75
Query: 309 QFYVADGK 316
+ +D K
Sbjct: 76 RVKESDQK 83
>SGD|S000000395 [details] [associations]
symbol:RPL21A "Ribosomal 60S subunit protein L21A"
species:4932 "Saccharomyces cerevisiae" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=TAS]
[GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
SGD:S000000395 EMBL:BK006936 GO:GO:0003735 GO:GO:0002181
EMBL:Z21487 PDB:4B6A PDBsum:4B6A InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 EMBL:U02073 PDB:1K5Y PDB:1S1I PDB:3IZS PDB:3O58
PDB:3O5H PDB:3U5E PDB:3U5I PDBsum:1K5Y PDBsum:1S1I PDBsum:3IZS
PDBsum:3O58 PDBsum:3O5H PDBsum:3U5E PDBsum:3U5I
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
EMBL:M86408 EMBL:Z36059 PIR:S28921 RefSeq:NP_009750.1
ProteinModelPortal:Q02753 SMR:Q02753 IntAct:Q02753
MINT:MINT-1324156 STRING:Q02753 PeptideAtlas:Q02753 PRIDE:Q02753
EnsemblFungi:YBR191W GeneID:852489 KEGG:sce:YBR191W CYGD:YBR191w
GeneTree:ENSGT00390000001293 OMA:GVIVYKV EvolutionaryTrace:Q02753
NextBio:971474 Genevestigator:Q02753 GermOnline:YBR191W
Uniprot:Q02753
Length = 160
Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 31/57 (54%), Positives = 35/57 (61%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M S GYR TR +F R FR+HG + LS Y+KVYKVGDIVDIK S M Y
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFY 57
Score = 141 (54.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISS 299
K G + +G++QKGMP K Y GKTG V+NVT+ +VGVI+NK V R + K
Sbjct: 35 KVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVE 94
Query: 300 SVSRKTCLAQF 310
+ C +F
Sbjct: 95 HIKHSKCRQEF 105
>UNIPROTKB|J9PAH7 [details] [associations]
symbol:J9PAH7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03003187
Ensembl:ENSCAFT00000029967 Uniprot:J9PAH7
Length = 150
Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 37/81 (45%), Positives = 45/81 (55%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKS----AE 295
KTG + G VQ MP K YHGKTG+V+N TQHAVG+ VNK+V+ R + K +E
Sbjct: 26 KTGDTVAIKGVNTVQNEMPHKRYHGKTGKVYNGTQHAVGIAVNKQVKGRRLAKRIDVRSE 85
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I S SR L D K
Sbjct: 86 HIKHSKSRDRLLKPLKENDQK 106
>UNIPROTKB|D4A5A5 [details] [associations]
symbol:D4A5A5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00949731 Ensembl:ENSRNOT00000057353 Uniprot:D4A5A5
Length = 54
Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 28/43 (65%), Positives = 34/43 (79%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
M N+KG RRGT +FSRPFR+ G IPL+ M++YK GDIVDIK
Sbjct: 1 MANTKGKRRGTWYMFSRPFRKRGVIPLATSMRIYKKGDIVDIK 43
>UNIPROTKB|F1M235 [details] [associations]
symbol:F1M235 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00564280 Ensembl:ENSRNOT00000045804 Uniprot:F1M235
Length = 129
Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 31/54 (57%), Positives = 39/54 (72%)
Query: 240 KTGRYLGKYGHGAVQKGMP-FKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
K G ++ G G VQK MP K YH KTGRV+NVTQHAVG+IVNK+V+ + + K
Sbjct: 3 KKGDFVDIKGMGTVQKRMPPHKCYHVKTGRVYNVTQHAVGIIVNKQVKGKALAK 56
>GENEDB_PFALCIPARUM|PF14_0240 [details] [associations]
symbol:PF14_0240 "ribosomal protein L21e,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0005739 GO:GO:0006412
GO:GO:0003735 EMBL:AE014187 InterPro:IPR008991 SUPFAM:SSF50104
GO:GO:0022625 HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981
OMA:KQVRNRI ProtClustDB:PTZ00189 RefSeq:XP_001348414.1
ProteinModelPortal:Q8ILK3 IntAct:Q8ILK3 MINT:MINT-1664699
PRIDE:Q8ILK3 EnsemblProtists:PF14_0240:mRNA GeneID:811822
KEGG:pfa:PF14_0240 EuPathDB:PlasmoDB:PF3D7_1426000 Uniprot:Q8ILK3
Length = 161
Score = 146 (56.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 219 KITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVG 278
K ++ + + + K K G Y+ QKGMPF YHGKTG++F++T+ VG
Sbjct: 15 KFSKKFRKHGECTANKYLEKLNYGDYVDIVCDSTQQKGMPFNYYHGKTGKIFHITKRGVG 74
Query: 279 VIVNKRVRTRIIPKSAEKISSSVSRKTCLAQF 310
V+VNKRV+ RI K V + C F
Sbjct: 75 VLVNKRVKHRIEQKKVCVRIEHVRKSRCNEDF 106
>UNIPROTKB|Q8ILK3 [details] [associations]
symbol:PF14_0240 "60S ribosomal protein L21e, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=ISS] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 GO:GO:0005739
GO:GO:0006412 GO:GO:0003735 EMBL:AE014187 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 HOGENOM:HOG000194513 KO:K02889
PANTHER:PTHR20981 OMA:KQVRNRI ProtClustDB:PTZ00189
RefSeq:XP_001348414.1 ProteinModelPortal:Q8ILK3 IntAct:Q8ILK3
MINT:MINT-1664699 PRIDE:Q8ILK3 EnsemblProtists:PF14_0240:mRNA
GeneID:811822 KEGG:pfa:PF14_0240 EuPathDB:PlasmoDB:PF3D7_1426000
Uniprot:Q8ILK3
Length = 161
Score = 146 (56.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 33/92 (35%), Positives = 47/92 (51%)
Query: 219 KITEDYPMNPNGSPGKRERKKKTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVG 278
K ++ + + + K K G Y+ QKGMPF YHGKTG++F++T+ VG
Sbjct: 15 KFSKKFRKHGECTANKYLEKLNYGDYVDIVCDSTQQKGMPFNYYHGKTGKIFHITKRGVG 74
Query: 279 VIVNKRVRTRIIPKSAEKISSSVSRKTCLAQF 310
V+VNKRV+ RI K V + C F
Sbjct: 75 VLVNKRVKHRIEQKKVCVRIEHVRKSRCNEDF 106
>SGD|S000006000 [details] [associations]
symbol:RPL21B "Ribosomal 60S subunit protein L21B"
species:4932 "Saccharomyces cerevisiae" [GO:0005840 "ribosome"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0002181 "cytoplasmic
translation" evidence=TAS] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=TAS] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 SGD:S000006000 EMBL:BK006949
GO:GO:0003735 GO:GO:0002181 EMBL:U41849 InterPro:IPR008991
SUPFAM:SSF50104 GO:GO:0022625 eggNOG:COG2139 HOGENOM:HOG000194513
KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
GeneTree:ENSGT00390000001293 PIR:S61108 RefSeq:NP_015246.1
ProteinModelPortal:Q12672 SMR:Q12672 IntAct:Q12672 STRING:Q12672
PaxDb:Q12672 PeptideAtlas:Q12672 EnsemblFungi:YPL079W GeneID:856026
KEGG:sce:YPL079W CYGD:YPL079w OMA:KQVRNRI NextBio:980941
Genevestigator:Q12672 GermOnline:YPL079W Uniprot:Q12672
Length = 160
Score = 145 (56.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 29/57 (50%), Positives = 35/57 (61%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVY 414
M S GYR TR +F R FR+HG + +S Y+K+YKVGDIVDIK S M Y
Sbjct: 1 MGKSHGYRSRTRYMFQRDFRKHGAVHMSTYLKIYKVGDIVDIKANGSIQKGMPHKFY 57
Score = 141 (54.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISS 299
K G + +G++QKGMP K Y GKTG V+NVT+ +VGVI+NK V R + K
Sbjct: 35 KVGDIVDIKANGSIQKGMPHKFYQGKTGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVE 94
Query: 300 SVSRKTCLAQF 310
+ C +F
Sbjct: 95 HIKHSKCRQEF 105
>UNIPROTKB|E1BM31 [details] [associations]
symbol:E1BM31 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 InterPro:IPR018259
Pfam:PF01157 PROSITE:PS01171 GO:GO:0006412 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:DAAA02062634 IPI:IPI00702461
Ensembl:ENSBTAT00000014565 OMA:KENDQKQ Uniprot:E1BM31
Length = 139
Score = 143 (55.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MTN+KG RR T +F R R+HG +PL+ YM++YK GDIVDIK
Sbjct: 1 MTNTKGKRRDTPYMFPRSLRKHGVVPLATYMQIYKKGDIVDIK 43
>RGD|1565555 [details] [associations]
symbol:RGD1565555 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1565555 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00778366 Ensembl:ENSRNOT00000058884 OMA:SIPYELM
Uniprot:D3ZCN5
Length = 158
Score = 143 (55.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G+G KGMP + YHGK R +NVTQHA+G+IVNK+V+ +I+ K E I SR
Sbjct: 47 GNGHCSKGMPHQCYHGKARRDYNVTQHAMGIIVNKQVKGKILAKRINVRIEHIKHLKSRD 106
Query: 305 TCLAQFYVADGK 316
+ L Q +D K
Sbjct: 107 SFLKQVKESDQK 118
>UNIPROTKB|Q66542 [details] [associations]
symbol:BNRF1 "P140" species:10376 "Human herpesvirus 4"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR010077
InterPro:IPR016188 GO:GO:0005198 GO:GO:0008152 GO:GO:0019033
InterPro:IPR010918 Pfam:PF02769 SUPFAM:SSF56042 SUPFAM:SSF55326
GO:GO:0004642 InterPro:IPR024346 Pfam:PF12818 TIGRFAMs:TIGR01739
EMBL:X67777 PIR:S29606 ProteinModelPortal:Q66542 IntAct:Q66542
Uniprot:Q66542
Length = 1318
Score = 106 (42.4 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 69 PNISVLQALNNVMRLVSVGSKRFLTNKVDRCVTGLIAQQQCVGPLHTPLADVAVVA 124
P +S+ L +++ +VGSK L DR G +AQQ VGPL PLAD A VA
Sbjct: 607 PWLSLESCLTSILSHPTVGSKEHLVRHTDRVSGGRVAQQPGVGPLDLPLADYAFVA 662
Score = 84 (34.6 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 30/127 (23%), Positives = 55/127 (43%)
Query: 673 IAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADALG 732
+AVL G G + A G + +++ +N LD++ GL G D+
Sbjct: 1040 VAVLCAPGTRGHESLLAAFTNAGCLCRRVFFREVRDNTF-LDKYVGLAIGGVHGARDSAL 1098
Query: 733 SAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCN-GCQLMNLLGWFSVSTQARQPYIKS 791
+ + A + + ++ + KF+ R DTFS + G Q++ LG + P ++
Sbjct: 1099 AGRATVALINRSPALRDAILKFLNRPDTFSVALGELGVQVLAGLGAVGSTDNPPAPGVEV 1158
Query: 792 RVRCPPL 798
V+ PL
Sbjct: 1159 NVQRSPL 1165
Score = 83 (34.3 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 132 GAATSIGEQPIKGLVDPKRGARMAVAEALTNLVFAKISD 170
G ++GEQ K +D + G R+A+AEAL N FA I D
Sbjct: 703 GTVITLGEQGYKVSLDLREGTRLAMAEALLNAAFAPILD 741
Score = 45 (20.9 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 146 VDPKRGARMAVAEALTNLV-FAKISDLKFLFASS 178
+DP+R AV EA+T +A+ +K F S+
Sbjct: 753 LDPRRADNSAVMEAMTAASDYARGLGVKLTFGSA 786
>POMBASE|SPAC959.08 [details] [associations]
symbol:rpl2102 "60S ribosomal protein L21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 PomBase:SPAC959.08
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003735 GO:GO:0002181
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
EMBL:AB010901 PIR:T43320 RefSeq:NP_594175.1
ProteinModelPortal:O42706 SMR:O42706 STRING:O42706 PRIDE:O42706
EnsemblFungi:SPAC959.08.1 GeneID:2543337 KEGG:spo:SPAC959.08
OMA:HVDVKVN NextBio:20804353 Uniprot:O42706
Length = 160
Score = 141 (54.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 250 HGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQ 309
+GAVQKGMP K YHGKTG V+NVTQ +VGV++ K V R + K V C
Sbjct: 45 NGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQD 104
Query: 310 F 310
F
Sbjct: 105 F 105
Score = 128 (50.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 27/43 (62%), Positives = 29/43 (67%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
M +S G R TR F R FR HG I LS Y+K YKVGDIVDIK
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIK 43
>POMBASE|SPBC365.03c [details] [associations]
symbol:rpl2101 "60S ribosomal protein L21 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001147
InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171 PomBase:SPBC365.03c
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
InterPro:IPR008991 SUPFAM:SSF50104 GO:GO:0022625 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 OMA:TRYMFAR PANTHER:PTHR20981
PIR:T40310 RefSeq:NP_596032.1 ProteinModelPortal:Q9UUC1 SMR:Q9UUC1
STRING:Q9UUC1 EnsemblFungi:SPBC365.03c.1 GeneID:2540950
KEGG:spo:SPBC365.03c OrthoDB:EOG412QFT NextBio:20802065
Uniprot:Q9UUC1
Length = 160
Score = 141 (54.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 250 HGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTCLAQ 309
+GAVQKGMP K YHGKTG V+NVTQ +VGV++ K V R + K V C
Sbjct: 45 NGAVQKGMPHKYYHGKTGVVYNVTQSSVGVLIYKVVGNRYMEKRVNVRIEHVKHSKCRQD 104
Query: 310 F 310
F
Sbjct: 105 F 105
Score = 128 (50.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 27/43 (62%), Positives = 29/43 (67%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
M +S G R TR F R FR HG I LS Y+K YKVGDIVDIK
Sbjct: 1 MPHSYGIRARTRYTFQRGFREHGQIRLSTYLKTYKVGDIVDIK 43
>UNIPROTKB|G4MSD5 [details] [associations]
symbol:MGG_04458 "Thymidylate synthase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_00008 InterPro:IPR000398 InterPro:IPR020940
Pfam:PF00303 PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575
EMBL:CM001232 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
KO:K00560 RefSeq:XP_003713554.1 ProteinModelPortal:G4MSD5
SMR:G4MSD5 EnsemblFungi:MGG_04458T0 GeneID:2678156
KEGG:mgr:MGG_04458 Uniprot:G4MSD5
Length = 339
Score = 160 (61.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 31/38 (81%), Positives = 33/38 (86%)
Query: 315 GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 352
G L CQLYQRS DMGLGVPFNIASY+LLT+MIA TGL
Sbjct: 226 GHLHCQLYQRSCDMGLGVPFNIASYALLTHMIARATGL 263
>UNIPROTKB|F1M1P0 [details] [associations]
symbol:F1M1P0 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 IPI:IPI00564025
Ensembl:ENSRNOT00000051232 Uniprot:F1M1P0
Length = 160
Score = 140 (54.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 365 RRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
RRGTR +FSRPFR+HG +PL+ YM++Y G++VDIK
Sbjct: 6 RRGTRYMFSRPFRKHGVVPLAAYMRIYNKGNVVDIK 41
Score = 137 (53.3 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 26/42 (61%), Positives = 33/42 (78%)
Query: 251 GAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
G VQKG P K YHGKTGRV +VTQ AV +IVNK+++ +I+ K
Sbjct: 44 GTVQKGTPHKCYHGKTGRVCSVTQDAVAIIVNKQIKGKILAK 85
>CGD|CAL0005915 [details] [associations]
symbol:CDC21 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0004799 "thymidylate synthase activity"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 CGD:CAL0005915
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0006231 DrugBank:DB01099
GO:GO:0004799 Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207 KO:K00560
EMBL:J04230 PIR:A32805 RefSeq:XP_714908.1 RefSeq:XP_714971.1
ProteinModelPortal:P12461 SMR:P12461 STRING:P12461 GeneID:3643367
GeneID:3643463 KEGG:cal:CaO19.11033 KEGG:cal:CaO19.3549
Uniprot:P12461
Length = 315
Score = 154 (59.3 bits), Expect = 7.4e-08, P = 7.4e-08
Identities = 32/44 (72%), Positives = 34/44 (77%)
Query: 309 QFYVADGKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 352
Q A KLSC LYQRS DMGLGVPFNIASY+LLT MIAHV +
Sbjct: 198 QAKTAKPKLSCLLYQRSCDMGLGVPFNIASYALLTKMIAHVVDM 241
>UNIPROTKB|G3MZB4 [details] [associations]
symbol:G3MZB4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001147 Pfam:PF01157
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 GeneTree:ENSGT00390000001293
EMBL:DAAA02006102 Ensembl:ENSBTAT00000028027 OMA:KRINACI
NextBio:20927125 Uniprot:G3MZB4
Length = 165
Score = 134 (52.2 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 32/61 (52%), Positives = 42/61 (68%)
Query: 251 GAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRKTC 306
G VQKGM K YHGKTGRV+ +TQHAVG+ VNK+V+ +I+ K ++I S SR +
Sbjct: 46 GNVQKGMLQKCYHGKTGRVY-ITQHAVGITVNKQVKGKILVKRINACIKQIKHSKSRDSF 104
Query: 307 L 307
L
Sbjct: 105 L 105
Score = 128 (50.1 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 24/43 (55%), Positives = 31/43 (72%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
MT++KG RRGT +FSRPF G +PL+ YM++YK D VD K
Sbjct: 1 MTSTKGERRGTLHMFSRPFGELGIVPLATYMQIYKKDDTVDTK 43
>POMBASE|SPAC15E1.04 [details] [associations]
symbol:SPAC15E1.04 "thymidylate synthase (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0004799 "thymidylate
synthase activity" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006231 "dTMP biosynthetic process" evidence=ISS]
[GO:0050660 "flavin adenine dinucleotide binding" evidence=ISM]
InterPro:IPR000398 InterPro:IPR003382 InterPro:IPR020940
Pfam:PF00303 Pfam:PF02441 PRINTS:PR00108 PROSITE:PS00091
UniPathway:UPA00575 PomBase:SPAC15E1.04 GO:GO:0005829 EMBL:CU329670
GO:GO:0050660 eggNOG:COG0452 KO:K01598 Gene3D:3.40.50.1950
SUPFAM:SSF52507 GO:GO:0006231 GO:GO:0004799 Gene3D:3.30.572.10
InterPro:IPR023451 SUPFAM:SSF55831 TIGRFAMs:TIGR03284 GO:GO:0006235
PIR:T37719 RefSeq:NP_594305.1 HSSP:P13100 ProteinModelPortal:Q9UTI7
SMR:Q9UTI7 STRING:Q9UTI7 EnsemblFungi:SPAC15E1.04.1 GeneID:2542801
KEGG:spo:SPAC15E1.04 OrthoDB:EOG418FX9 NextBio:20803844
Uniprot:Q9UTI7
Length = 625
Score = 158 (60.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/52 (67%), Positives = 41/52 (78%)
Query: 309 QFYVAD-----GK--LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
QFYV++ GK LS +YQRSADMGLGVPFNIASYSLLT+MIAH+ G +
Sbjct: 502 QFYVSEPCKPGGKPQLSSMMYQRSADMGLGVPFNIASYSLLTHMIAHMCGYE 553
>UNIPROTKB|D4A886 [details] [associations]
symbol:D4A886 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D IPI:IPI00564567
Ensembl:ENSRNOT00000052276 Uniprot:D4A886
Length = 141
Score = 133 (51.9 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 30/55 (54%), Positives = 37/55 (67%)
Query: 253 VQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSR 303
VQK M K YH KTGRV+NVTQHAV +IVNK+V+ +++ K E I S SR
Sbjct: 40 VQKEMSHKCYHSKTGRVYNVTQHAVAIIVNKQVKGKMLAKRINVRIEHIKHSKSR 94
Score = 116 (45.9 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 28/65 (43%), Positives = 39/65 (60%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYSSP 417
M N+KG RRGT+ +FSR FR HG +PL+ MK GDI+DIK + + +C +S
Sbjct: 1 MMNTKGRRRGTQ-MFSRLFREHGVVPLATCMK----GDIIDIKNVQK--EMSHKCYHSKT 53
Query: 418 LTSFN 422
+N
Sbjct: 54 GRVYN 58
>ASPGD|ASPL0000066643 [details] [associations]
symbol:AN7028 species:162425 "Emericella nidulans"
[GO:0006139 "nucleobase-containing compound metabolic process"
evidence=RCA] [GO:0004799 "thymidylate synthase activity"
evidence=RCA] [GO:0008616 "queuosine biosynthetic process"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process" evidence=IEA]
[GO:0008479 "queuine tRNA-ribosyltransferase activity"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] HAMAP:MF_00008
InterPro:IPR000398 InterPro:IPR002616 InterPro:IPR004803
InterPro:IPR020940 Pfam:PF00303 Pfam:PF01702 PRINTS:PR00108
PROSITE:PS00091 EMBL:BN001304 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0008616 GO:GO:0008479 Gene3D:3.20.20.105
SUPFAM:SSF51713 TIGRFAMs:TIGR00449 TIGRFAMs:TIGR00430
EnsemblFungi:CADANIAT00000445 Uniprot:C8VB77
Length = 674
Score = 157 (60.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 30/38 (78%), Positives = 34/38 (89%)
Query: 315 GKLSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGL 352
G+LSC LYQRS DMGLGVPFNIASY+LLT++IAH T L
Sbjct: 564 GELSCLLYQRSCDMGLGVPFNIASYALLTHIIAHATDL 601
>ASPGD|ASPL0000075029 [details] [associations]
symbol:AN4802 species:162425 "Emericella nidulans"
[GO:0005829 "cytosol" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 InterPro:IPR018259 Pfam:PF01157 PROSITE:PS01171
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 EMBL:BN001303
EMBL:AACD01000081 InterPro:IPR008991 SUPFAM:SSF50104 eggNOG:COG2139
HOGENOM:HOG000194513 KO:K02889 PANTHER:PTHR20981 OrthoDB:EOG412QFT
OMA:GVIVYKV RefSeq:XP_662406.1 ProteinModelPortal:Q5B3S8 SMR:Q5B3S8
STRING:Q5B3S8 EnsemblFungi:CADANIAT00005619 GeneID:2872596
KEGG:ani:AN4802.2 Uniprot:Q5B3S8
Length = 158
Score = 130 (50.8 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 30/58 (51%), Positives = 35/58 (60%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMTECVYS 415
M +S G R GTR FSR FR G I LS Y+K Y+VGDIVDIK + M VY+
Sbjct: 1 MGHSHGLRSGTRYAFSRNFREKGQIRLSTYLKTYRVGDIVDIKVNGAVQKGMPYKVYN 58
Score = 127 (49.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 25/43 (58%), Positives = 34/43 (79%)
Query: 250 HGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPK 292
+GAVQKGMP+K Y+GKTG V+NVT+ +VGV++ K V R + K
Sbjct: 45 NGAVQKGMPYKVYNGKTGVVYNVTKSSVGVLLYKVVGNRYLEK 87
>RGD|1565713 [details] [associations]
symbol:RGD1565713 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1565713 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00564035 Ensembl:ENSRNOT00000048255 UCSC:RGD:1565713
NextBio:630806 Uniprot:D3ZM68
Length = 157
Score = 129 (50.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/81 (43%), Positives = 45/81 (55%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----E 295
K G + G AVQKG K YHGK GRV +VTQHA+G+IVN +V+ +++ K E
Sbjct: 32 KKGDIVDIKGMVAVQKGTTPKCYHGKPGRVCSVTQHAMGIIVNTQVKGKLLAKRISVRIE 91
Query: 296 KISSSVSRKTCLAQFYVADGK 316
+I SR L Q D K
Sbjct: 92 QIKQLRSRDGFLKQVQENDQK 112
Score = 117 (46.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 28/61 (45%), Positives = 36/61 (59%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MTN+K RR TR + SR RHG +PLS M ++K GDIVDIK + T +C +
Sbjct: 1 MTNTKERRRVTRSMLSR---RHGVVPLSTCMGIHKKGDIVDIKGMVAVQKGTTPKCYHGK 57
Query: 417 P 417
P
Sbjct: 58 P 58
>UNIPROTKB|D4A4G8 [details] [associations]
symbol:D4A4G8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 IPI:IPI00562174
Ensembl:ENSRNOT00000050067 Uniprot:D4A4G8
Length = 144
Score = 129 (50.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSS 416
MTN+KG RRGT +FSRP R+HG + L+ M+++K GDI DIK + M +C +S
Sbjct: 1 MTNTKGRRRGTWCMFSRPLRKHGAVLLATNMRIHK-GDIADIKGMGTVQKGMPPKCYHSK 59
Query: 417 PLTSFN 422
+N
Sbjct: 60 TGRVYN 65
>TIGR_CMR|APH_0225 [details] [associations]
symbol:APH_0225 "putative
phosphoribosylformylglycinamidine synthase I" species:212042
"Anaplasma phagocytophilum HZ" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR010075 PIRSF:PIRSF001586 GO:GO:0005737
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 KO:K01952 GO:GO:0004642
eggNOG:COG0047 HOGENOM:HOG000238239 OMA:FSYGDDT
ProtClustDB:CLSK749580 RefSeq:YP_504844.1 STRING:Q2GLA7
GeneID:3931135 KEGG:aph:APH_0225 PATRIC:20949024
BioCyc:APHA212042:GHPM-257-MONOMER Uniprot:Q2GLA7
Length = 260
Score = 144 (55.7 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Query: 701 ITVQDLLENKITLDRFKGLVFPGGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDT 760
+ +++LL N L F +V PGGFSY D G+ +A L+ G+ + F+AR DT
Sbjct: 37 VHIKELLSNPKQLASFNTMVIPGGFSYGDDTGAGNAYALRLI--HGLNEHIRDFMAR-DT 93
Query: 761 FSFGVCNGCQLM 772
G+CNGCQ++
Sbjct: 94 LLLGICNGCQIL 105
>RGD|1596172 [details] [associations]
symbol:LOC689132 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1596172 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104
PANTHER:PTHR20981 GeneTree:ENSGT00390000001293 OrthoDB:EOG4K6G5D
IPI:IPI00568318 Ensembl:ENSRNOT00000047160 Uniprot:D3ZH87
Length = 156
Score = 127 (49.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 23/42 (54%), Positives = 31/42 (73%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRII 290
G G VQK MP K YH +TGR +NVTQH +G I +K+V+ +I+
Sbjct: 40 GMGTVQKRMPQKCYHSQTGRXYNVTQHVIGTIAHKQVKGKIL 81
Score = 117 (46.2 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTIPL-SVYMKVYKVGDIVDIKCAESFYDRMTE-CVYS 415
MTN+KG RRG + PFR+H +PL +YM++Y G I+DIK + RM + C +S
Sbjct: 1 MTNTKGKRRG-----NHPFRKHVVVPLICIYMQIYNKGGIIDIKGMGTVQKRMPQKCYHS 55
Query: 416 SPLTSFN 422
+N
Sbjct: 56 QTGRXYN 62
>RGD|1594606 [details] [associations]
symbol:LOC691874 "similar to ribosomal protein L21"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001147 Pfam:PF01157 RGD:1594606 RGD:1595537
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 InterPro:IPR008991
SUPFAM:SSF50104 PANTHER:PTHR20981 OrthoDB:EOG4K6G5D IPI:IPI00387693
Ensembl:ENSRNOT00000030924 Uniprot:D3ZPB0
Length = 159
Score = 127 (49.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGM + H KT RV++VTQ AVG+IVNK+V+ +I+ K E I S+SR
Sbjct: 44 GMGTVQKGMLPRVTHSKTARVYSVTQQAVGIIVNKQVKGKILAKRISVRIEHIRHSMSRD 103
Query: 305 TCLAQFYVADGK 316
L + D K
Sbjct: 104 GFLKRVKENDQK 115
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTI-PLSVYMKVYKVGDIVDIK 400
M N+KG RRGTR +FSRP R+ G + PL+ M++++ D+VD K
Sbjct: 1 MMNTKGERRGTRYMFSRPLRKRGVVVPLAANMRIHR-RDVVDTK 43
>RGD|1595537 [details] [associations]
symbol:LOC678883 "hypothetical protein LOC678883" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 RGD:1594606 RGD:1595537 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
OrthoDB:EOG4K6G5D IPI:IPI00387693 Ensembl:ENSRNOT00000030924
Uniprot:D3ZPB0
Length = 159
Score = 127 (49.8 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 33/72 (45%), Positives = 43/72 (59%)
Query: 249 GHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSA----EKISSSVSRK 304
G G VQKGM + H KT RV++VTQ AVG+IVNK+V+ +I+ K E I S+SR
Sbjct: 44 GMGTVQKGMLPRVTHSKTARVYSVTQQAVGIIVNKQVKGKILAKRISVRIEHIRHSMSRD 103
Query: 305 TCLAQFYVADGK 316
L + D K
Sbjct: 104 GFLKRVKENDQK 115
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 358 MTNSKGYRRGTRDLFSRPFRRHGTI-PLSVYMKVYKVGDIVDIK 400
M N+KG RRGTR +FSRP R+ G + PL+ M++++ D+VD K
Sbjct: 1 MMNTKGERRGTRYMFSRPLRKRGVVVPLAANMRIHR-RDVVDTK 43
>TAIR|locus:2049389 [details] [associations]
symbol:AT2G21550 species:3702 "Arabidopsis thaliana"
[GO:0004146 "dihydrofolate reductase activity" evidence=IEA]
[GO:0004799 "thymidylate synthase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006231 "dTMP
biosynthetic process" evidence=IEA] [GO:0006545 "glycine
biosynthetic process" evidence=IEA] [GO:0006730 "one-carbon
metabolic process" evidence=IEA] [GO:0009165 "nucleotide
biosynthetic process" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
InterPro:IPR000398 InterPro:IPR001796 InterPro:IPR012262
InterPro:IPR017925 Pfam:PF00186 Pfam:PF00303 PIRSF:PIRSF000389
PRINTS:PR00108 PROSITE:PS00075 PROSITE:PS51330 UniPathway:UPA00077
InterPro:IPR024072 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006730 GO:GO:0046654 GO:GO:0006231 eggNOG:COG0262
HOGENOM:HOG000257901 ProtClustDB:CLSN2683596 GO:GO:0004146
GO:GO:0004799 GO:GO:0006545 Gene3D:3.30.572.10 Gene3D:3.40.430.10
InterPro:IPR023451 SUPFAM:SSF53597 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 EMBL:AC007119 HSSP:P13100 IPI:IPI00533060
PIR:F84602 RefSeq:NP_179750.1 UniGene:At.50088
ProteinModelPortal:Q9SIK4 SMR:Q9SIK4 STRING:Q9SIK4
EnsemblPlants:AT2G21550.1 GeneID:816694 KEGG:ath:AT2G21550
TAIR:At2g21550 InParanoid:Q9SIK4 OMA:CHNIAID PhylomeDB:Q9SIK4
ArrayExpress:Q9SIK4 Genevestigator:Q9SIK4 Uniprot:Q9SIK4
Length = 492
Score = 159 (61.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 34/85 (40%), Positives = 50/85 (58%)
Query: 270 FNVTQHAVGVIVNKRVRTRIIPKSAEKISSSVSRKTC--LAQFYVADGKLSCQLYQRSAD 327
F+ + I N RI+ + + +S C QFYVA+G++SCQ+YQ S +
Sbjct: 350 FSQLSDVINKIKNNPHDQRIMLAACNPLDFKLSVSPCHTFTQFYVANGEVSCQIYQSSTE 409
Query: 328 MGLGVPFNIASYSLLTYMIAHVTGL 352
+G+PF+IA+YSLLT +IAHV L
Sbjct: 410 ASIGIPFSIATYSLLTCIIAHVCDL 434
Score = 37 (18.1 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 186 YSFSGRFAFKNHGIYDHLDRSQ-CLPIRYVDDNNKITE 222
YSF + F+ H + +L+ Q + ++DN+ +++
Sbjct: 222 YSFLPKMVFERHEEFGYLNLVQNIISSGDMNDNSTLSK 259
>UNIPROTKB|F1PUD9 [details] [associations]
symbol:F1PUD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
GeneTree:ENSGT00390000001293 EMBL:AAEX03000212
Ensembl:ENSCAFT00000030679 Uniprot:F1PUD9
Length = 150
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 240 KTGRYLGKYGHGAVQKGMPFKDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAEKI 297
K G + G G++Q+GMP K YH + RV +VTQ+AVG++VNK+ + +I+ K I
Sbjct: 35 KKGDIVSLKGMGSIQEGMPHKCYHVRPERVCSVTQYAVGIVVNKQGKGKILAKRTNVI 92
Score = 111 (44.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/114 (29%), Positives = 55/114 (48%)
Query: 360 NSKGYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIKCAESFYDRMT-ECVYSSP- 417
N + R +FS R+HG +PL+ M++YK GDIV +K S + M +C + P
Sbjct: 3 NDQNKEEEKRYMFSGSSRKHGVVPLATSMRIYKKGDIVSLKGMGSIQEGMPHKCYHVRPE 62
Query: 418 ----LTSFNHGIKPDPWFYVDVMGKGKVAFNSNSLVFFQC----AESFYDRMTE 463
+T + GI V+ GKGK+ +++ + ++SF RM E
Sbjct: 63 RVCSVTQYAVGI------VVNKQGKGKILAKRTNVIIERMKHSKSDSFRKRMKE 110
>UNIPROTKB|F1M361 [details] [associations]
symbol:F1M361 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001147
Pfam:PF01157 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
InterPro:IPR008991 SUPFAM:SSF50104 PANTHER:PTHR20981
IPI:IPI00782358 PRIDE:F1M361 Ensembl:ENSRNOT00000021633
Uniprot:F1M361
Length = 149
Score = 124 (48.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 36/81 (44%), Positives = 45/81 (55%)
Query: 244 YLGKYGHG-AVQ-KGM-PF-----KDYHGKTGRVFNVTQHAVGVIVNKRVRTRIIPKSAE 295
Y+G Y G V KGM P K Y KTGRV +VTQHAVG+IVNK+V+ +++ K E
Sbjct: 25 YMGIYKKGDTVDIKGMSPVRKTSHKCYRSKTGRVCSVTQHAVGIIVNKQVKDKMLAKRIE 84
Query: 296 KISSSVSRKTCLAQFYVADGK 316
I SR L + D K
Sbjct: 85 HIKHPKSRDGFLKRVKANDQK 105
Score = 107 (42.7 bits), Expect = 0.00022, P = 0.00022
Identities = 21/38 (55%), Positives = 25/38 (65%)
Query: 363 GYRRGTRDLFSRPFRRHGTIPLSVYMKVYKVGDIVDIK 400
G +R R LFS F +HG +PL YM +YK GD VDIK
Sbjct: 1 GKQRAVRYLFSGTFWKHGVVPLVTYMGIYKKGDTVDIK 38
>SGD|S000005600 [details] [associations]
symbol:CDC21 "Thymidylate synthase" species:4932
"Saccharomyces cerevisiae" [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0009165
"nucleotide biosynthetic process" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0032259 "methylation"
evidence=IEA] [GO:0006231 "dTMP biosynthetic process"
evidence=IEA;TAS] [GO:0004799 "thymidylate synthase activity"
evidence=IEA;IDA] [GO:0006235 "dTTP biosynthetic process"
evidence=IEA] InterPro:IPR000398 InterPro:IPR020940 Pfam:PF00303
PRINTS:PR00108 PROSITE:PS00091 UniPathway:UPA00575 SGD:S000005600
GO:GO:0005634 EMBL:BK006948 EMBL:Z70678 GO:GO:0006231 GO:GO:0004799
Gene3D:3.30.572.10 InterPro:IPR023451 SUPFAM:SSF55831
TIGRFAMs:TIGR03284 GO:GO:0006235 eggNOG:COG0207
HOGENOM:HOG000257899 KO:K00560 OMA:DTNVAYL
GeneTree:ENSGT00390000014786 OrthoDB:EOG418FX9 EMBL:J02706
EMBL:Z74982 EMBL:M29100 PIR:S66957 RefSeq:NP_014717.2
ProteinModelPortal:P06785 SMR:P06785 DIP:DIP-2786N IntAct:P06785
MINT:MINT-562757 STRING:P06785 PaxDb:P06785 PeptideAtlas:P06785
EnsemblFungi:YOR074C GeneID:854241 KEGG:sce:YOR074C CYGD:YOR074c
NextBio:976141 Genevestigator:P06785 Uniprot:P06785
Length = 304
Score = 143 (55.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 34/55 (61%), Positives = 39/55 (70%)
Query: 308 AQFYVA-------DGK--LSCQLYQRSADMGLGVPFNIASYSLLTYMIAHVTGLQ 353
+QFYV+ GK LSC LYQRS DMGLGVPFNIASY+LLT MIA V ++
Sbjct: 181 SQFYVSFPKEGEGSGKPRLSCLLYQRSCDMGLGVPFNIASYALLTRMIAKVVDME 235
>TIGR_CMR|DET_0378 [details] [associations]
symbol:DET_0378 "phosphoribosylformylglycinamidine
synthase I" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] HAMAP:MF_00421 InterPro:IPR010075
PIRSF:PIRSF001586 UniPathway:UPA00074 GO:GO:0005524 GO:GO:0005737
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0006189 GO:GO:0006541
InterPro:IPR017926 PROSITE:PS51273 KO:K01952 GO:GO:0004642
eggNOG:COG0047 TIGRFAMs:TIGR01737 RefSeq:YP_181124.1
ProteinModelPortal:Q3Z9H5 STRING:Q3Z9H5 GeneID:3230300
KEGG:det:DET0378 PATRIC:21607825 HOGENOM:HOG000238239 OMA:FSYGDDT
ProtClustDB:CLSK837519 BioCyc:DETH243164:GJNF-378-MONOMER
Uniprot:Q3Z9H5
Length = 255
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 671 ISIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADA 730
+ +LR G N D E S ++ G E + + +LL L F+ + FPGGF Y D
Sbjct: 4 VKTLILRTPGTNCDIETSYAFELAGSETEMVHINELLAKPSRLAEFQIMAFPGGFGYGDD 63
Query: 731 LGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQLM 772
LG+ + A + L G K +N+F S G+CNG Q +
Sbjct: 64 LGAGRVLANEVRLKLGEK--INRF-HESGGLIIGICNGFQAL 102
>UNIPROTKB|Q2GDW3 [details] [associations]
symbol:NSE_0448 "Putative phosphoribosylformylglycinamidine
synthase I" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR010075 PIRSF:PIRSF001586
GO:GO:0005737 GO:GO:0006189 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR017926 PROSITE:PS51273 GO:GO:0009152 KO:K01952
GO:GO:0004642 eggNOG:COG0047 HOGENOM:HOG000238239 OMA:FSYGDDT
RefSeq:YP_506333.1 ProteinModelPortal:Q2GDW3 STRING:Q2GDW3
GeneID:3931771 KEGG:nse:NSE_0448 PATRIC:22680949
ProtClustDB:CLSK2528137 BioCyc:NSEN222891:GHFU-469-MONOMER
Uniprot:Q2GDW3
Length = 240
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 672 SIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADAL 731
S+ VL G+N + E ++ GF + + DLL L + L PGGFS+AD
Sbjct: 3 SVLVLSGYGLNCEDETLRAFELSGFAGSVLHLDDLLNKPNKLCNHQVLAIPGGFSFADNT 62
Query: 732 GSAKGWAASLL-LNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLL 775
G+ +A + L E ++ LNK D G+CNG Q++ L
Sbjct: 63 GAGNAFACKTIPLLEEVENFLNK-----DKLVIGICNGAQILTRL 102
>TIGR_CMR|NSE_0448 [details] [associations]
symbol:NSE_0448 "putative
phosphoribosylformylglycinamidine synthase I" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR010075 PIRSF:PIRSF001586 GO:GO:0005737
GO:GO:0006189 EMBL:CP000237 GenomeReviews:CP000237_GR
InterPro:IPR017926 PROSITE:PS51273 GO:GO:0009152 KO:K01952
GO:GO:0004642 eggNOG:COG0047 HOGENOM:HOG000238239 OMA:FSYGDDT
RefSeq:YP_506333.1 ProteinModelPortal:Q2GDW3 STRING:Q2GDW3
GeneID:3931771 KEGG:nse:NSE_0448 PATRIC:22680949
ProtClustDB:CLSK2528137 BioCyc:NSEN222891:GHFU-469-MONOMER
Uniprot:Q2GDW3
Length = 240
Score = 124 (48.7 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 34/105 (32%), Positives = 51/105 (48%)
Query: 672 SIAVLREEGINGDREMSAMAQVCGFEVWDITVQDLLENKITLDRFKGLVFPGGFSYADAL 731
S+ VL G+N + E ++ GF + + DLL L + L PGGFS+AD
Sbjct: 3 SVLVLSGYGLNCEDETLRAFELSGFAGSVLHLDDLLNKPNKLCNHQVLAIPGGFSFADNT 62
Query: 732 GSAKGWAASLL-LNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLL 775
G+ +A + L E ++ LNK D G+CNG Q++ L
Sbjct: 63 GAGNAFACKTIPLLEEVENFLNK-----DKLVIGICNGAQILTRL 102
>TIGR_CMR|ECH_0362 [details] [associations]
symbol:ECH_0362 "putative
phosphoribosylformylglycinamidine synthase I" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0004642
"phosphoribosylformylglycinamidine synthase activity" evidence=ISS]
[GO:0009152 "purine ribonucleotide biosynthetic process"
evidence=ISS] InterPro:IPR010075 PIRSF:PIRSF001586 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 KO:K01952 GO:GO:0004642
eggNOG:COG0047 HOGENOM:HOG000238239 OMA:FSYGDDT RefSeq:YP_507182.1
ProteinModelPortal:Q2GHA1 STRING:Q2GHA1 GeneID:3927193
KEGG:ech:ECH_0362 PATRIC:20576213 ProtClustDB:CLSK749580
BioCyc:ECHA205920:GJNR-363-MONOMER Uniprot:Q2GHA1
Length = 267
Score = 124 (48.7 bits), Expect = 0.00011, P = 0.00011
Identities = 34/121 (28%), Positives = 60/121 (49%)
Query: 669 KVISIAVLREEGINGDRE-MSAMAQV-----CGFEVWDITVQDLLENKITLDRFKGLVFP 722
K + + VL G+N + E + A + C + + + +++ L + L P
Sbjct: 2 KKMKVIVLSGYGLNCEEETLFAFVKAGELLSCDVQGKIVHINEVISCPNLLRDYNVLAIP 61
Query: 723 GGFSYADALGSAKGWAASLLLNEGIKTQLNKFIARSDTFSFGVCNGCQ-LMNLLGWFSVS 781
GGFSY D G+ +A + N ++ ++++F+A D G+CNGCQ LM L+ F+
Sbjct: 62 GGFSYGDDTGAGNAFALRIFHN--LREEISEFLA-GDKLVIGICNGCQILMRLISDFACI 118
Query: 782 T 782
T
Sbjct: 119 T 119
>TIGR_CMR|GSU_1635 [details] [associations]
symbol:GSU_1635 "phosphoribosylformylglycinamidine
synthase I, putative" species:243231 "Geobacter sulfurreducens PCA"
[GO:0004642 "phosphoribosylformylglycinamidine synthase activity"
evidence=ISS] [GO:0009152 "purine ribonucleotide biosynthetic
process" evidence=ISS] InterPro:IPR010075 PIRSF:PIRSF001586
GO:GO:0005737 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0006189
InterPro:IPR017926 PROSITE:PS51273 KO:K01952 GO:GO:0004642
HOGENOM:HOG000238239 OMA:FSYGDDT RefSeq:NP_952686.1
ProteinModelPortal:Q74CN8 GeneID:2687210 KEGG:gsu:GSU1635
PATRIC:22026119 ProtClustDB:CLSK828454
BioCyc:GSUL243231:GH27-1611-MONOMER Uniprot:Q74CN8
Length = 275
Score = 117 (46.2 bits), Expect = 0.00072, P = 0.00072
Identities = 38/109 (34%), Positives = 51/109 (46%)
Query: 675 VLREEGINGDREMSAMAQVCGFEVWDIT-VQDLLENKITLDRFKGLVFPGGFSYADALGS 733
V+ G N + E + ++ GF+ I + D+L +I LD F L GGF D LGS
Sbjct: 8 VITGNGTNCEMEAAHACRLGGFDETVIAHISDILTGEIRLDDFHFLNLTGGFLDGDDLGS 67
Query: 734 AKGWAASLL------LNEGIKTQLNKFIARSDTFSFGVCNGCQLMNLLG 776
AK A L E + Q+ +FI GVCNG QLM +G
Sbjct: 68 AKAQANRFRYARVDDLEEHLIDQIIRFIDAGKLI-LGVCNGFQLMTKMG 115
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 875 863 0.00084 122 3 11 22 0.50 33
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 148
No. of states in DFA: 625 (66 KB)
Total size of DFA: 433 KB (2206 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 75.04u 0.13s 75.17t Elapsed: 00:00:04
Total cpu time: 75.06u 0.13s 75.19t Elapsed: 00:00:04
Start: Thu Aug 15 11:00:42 2013 End: Thu Aug 15 11:00:46 2013
WARNINGS ISSUED: 1