RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy5573
(338 letters)
>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId:
9606]}
Length = 408
Score = 79.6 bits (195), Expect = 4e-17
Identities = 31/104 (29%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Query: 11 LTPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKE 70
LTPL A + ++ +V+ LL+ G N T L +A H E
Sbjct: 1 LTPLHVASFMGHLPIVKNLLQRGASPNVSNV-KVETPLHMAARAGH------------TE 47
Query: 71 IVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGA 114
+ LL N A VN K+ T LH A R + +V+ LL + A
Sbjct: 48 VAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTN-MVKLLLENNA 90
Score = 69.6 bits (169), Expect = 8e-14
Identities = 28/100 (28%), Positives = 39/100 (39%), Gaps = 6/100 (6%)
Query: 58 HIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYN 117
H+A+ G IV LL GA N + T LHMA R + + + LL++ A N
Sbjct: 5 HVAS---FMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTE-VAKYLLQNKAKVN 60
Query: 118 VVDGKTGKTPLLHA-GKGAREVNTVLLYFINEIFKLMANN 156
K +TPL A G + +LL
Sbjct: 61 AKA-KDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAG 99
Score = 68.1 bits (165), Expect = 2e-13
Identities = 62/285 (21%), Positives = 105/285 (36%), Gaps = 33/285 (11%)
Query: 13 PLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIV 72
PL A +R+ E LL N K +G T L VAVH N+ +IV
Sbjct: 135 PLHVAAKYGKVRVAELLLERDAHPNAAGK-NGLTPLHVAVHHNN------------LDIV 181
Query: 73 DLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAG 132
LLL G + + G+T LH+A + + + + R LL++G N G TPL A
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE-VARSLLQYGGSANAES-VQGVTPLHLAA 239
Query: 133 KGAREVNTVLLYFINEIFKLMANNDTTILDRLD-----EMKSLILEVTKEFGPGDYNNFS 187
+ LL L + T L + + ++++ ++
Sbjct: 240 QEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYT 299
Query: 188 LLKVAKNDAGETILDIFFELIGKNDTTILDRLDEMKSIKLELTKAFGPGDYNNFSLL--- 244
L VA + ++ + + K L +A G + +LL
Sbjct: 300 PLHVASHYGNIKLVKFLLQHQADVNAK-------TKLGYSPLHQAAQQGHTDIVTLLLKN 352
Query: 245 ---KVTKNDAGETILDIAKKRGFPLLEELEKKLADANNDTTILDR 286
+ G T L IAK+ G+ + ++ K + D + + D+
Sbjct: 353 GASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDK 397
Score = 64.6 bits (156), Expect = 3e-12
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 18/158 (11%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
TPL + ++ + + L++ G V+ + G T L VA H+ + + L+ H A
Sbjct: 266 TPLHLVAQEGHVPVADVLIKHGVMVDATTR-MGYTPLHVASHYGNIKLVKFLLQHQADV- 323
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
N K+ G++ LH A + D IV LL++GA N V G TPL A
Sbjct: 324 -----------NAKTKLGYSPLHQAAQQGHTD-IVTLLLKNGASPNEVS-SDGTTPLAIA 370
Query: 132 GK-GAREVNTVLLYFINEIFKLMA--NNDTTILDRLDE 166
+ G V VL +E ++ + + + +DE
Sbjct: 371 KRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPETVDE 408
Score = 40.7 bits (94), Expect = 2e-04
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 91 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 143
T LH+A IV+ LL+ GA NV + +TPL A G EV LL
Sbjct: 2 TPLHVASF-MGHLPIVKNLLQRGASPNVSN-VKVETPLHMAARAGHTEVAKYLL 53
>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}
Length = 223
Score = 65.8 bits (159), Expect = 3e-13
Identities = 43/213 (20%), Positives = 65/213 (30%), Gaps = 34/213 (15%)
Query: 14 LCAAVWDNNIR-LVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLI-------- 64
+C + + L E +L + D RTAL A H I L+
Sbjct: 7 VCNLAYSGKLEELKESILADKSLATRTDQ-DSRTALHWACSAGHTEIVEFLLQLGVPVND 65
Query: 65 -------------HHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLR 111
G EIV LL GA VN + G T LH A + + I LL
Sbjct: 66 KDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHE-IAVMLLE 124
Query: 112 HGAYYNVVDGKTGKTPLLHAGKGAREVNTVLLYFINEIFKLMANNDTTILDRLDEMKSL- 170
GA + D T + A +L + + T L + + +
Sbjct: 125 GGANPDAKD-HYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVE 183
Query: 171 ILEVTKEFGPGDYNNFSLLKVAKNDAGETILDI 203
++ G +N +T L +
Sbjct: 184 EAKLLVSQGA-SIY-------IENKEEKTPLQV 208
Score = 65.4 bits (158), Expect = 5e-13
Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 24/120 (20%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIH------ 65
TPL A N + LL G + + K TA+ A + + +L++
Sbjct: 105 TPLHYAASKNRHEIAVMLLEGGANPDAKDH-YEATAMHRAAAKGNLKMIHILLYYKASTN 163
Query: 66 ---------------HGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLL 110
E LL+ GA + ++ T L +A I+++++
Sbjct: 164 IQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGL--ILKRMV 221
>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human
(Homo sapiens) [TaxId: 9606]}
Length = 285
Score = 66.1 bits (160), Expect = 5e-13
Identities = 28/135 (20%), Positives = 48/135 (35%), Gaps = 27/135 (20%)
Query: 12 TPLCAAVWDNNIRLVEYLL-RTGHDVNEKMKLDGRTALFVAVHFNHRHIAAL---LIHHG 67
T L A ++ +++ LL G DVN + + + + + A+ L+ HG
Sbjct: 150 TALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHG 209
Query: 68 A---------------------KEIVDLLLD-NGADVNFKSATGFTALHMACRFHDDDSI 105
A +V LL+ ++N + G TAL +A I
Sbjct: 210 ADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKK-I 268
Query: 106 VRKLLRHGAYYNVVD 120
L + GA + D
Sbjct: 269 AELLCKRGASTDCGD 283
Score = 58.4 bits (140), Expect = 2e-10
Identities = 64/303 (21%), Positives = 104/303 (34%), Gaps = 65/303 (21%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLI------- 64
L AV + ++ LV+ LL G +VN + + G T L AV + I LL+
Sbjct: 7 HLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPV 66
Query: 65 --------------HHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLL 110
G+ +++ L L GADVN GFTA A + ++
Sbjct: 67 LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYK 126
Query: 111 RHGAY--------YNVVDGKTGKTPLLHA-GKGAREVNTVLLYFINEIFKLMANNDTTIL 161
R K G T L+ A KG EV +LL D
Sbjct: 127 RGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILL--------DEMGADVNAC 178
Query: 162 DRLDEMKSLILEVTKEFGPGDYNNFSLLKV-----AKNDAGETILDIFFELIGKNDTTIL 216
D + + ++ + + LL + + G+T L + E K ++
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVE---KKHLGLV 235
Query: 217 DRLDEMKSIKLELTKAFGPGDYNNFSLLKVTKNDAGETILDIAKKRGFP-LLEELEKKLA 275
RL E + I++ + G+T L +A + + E L K+ A
Sbjct: 236 QRLLEQEHIEIND------------------TDSDGKTALLLAVELKLKKIAELLCKRGA 277
Query: 276 DAN 278
+
Sbjct: 278 STD 280
Score = 56.5 bits (135), Expect = 8e-10
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 18/87 (20%)
Query: 4 GATINVE----LTPLCAAVWDNNIRLVEYLL-RTGHDVNEKMKLDGRTALFVAVHFNHRH 58
GA +NV TPL AV ++ LV+ LL + ++N+ DG+TAL +AV
Sbjct: 209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDS-DGKTALLLAVELKL-- 265
Query: 59 IAALLIHHGAKEIVDLLLDNGADVNFK 85
K+I +LL GA +
Sbjct: 266 ----------KKIAELLCKRGASTDCG 282
Score = 45.7 bits (107), Expect = 3e-06
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 14/77 (18%)
Query: 42 LDGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFK-SATGFTALHMACRFH 100
++ L AV ++V LL+ GA+VNF+ G+T LH A +
Sbjct: 3 VEDNHLLIKAVQNED------------VDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS 50
Query: 101 DDDSIVRKLLRHGAYYN 117
+D IV LLRHGA
Sbjct: 51 RED-IVELLLRHGADPV 66
>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1,
MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}
Length = 291
Score = 63.6 bits (153), Expect = 5e-12
Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 18/108 (16%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
T L A +++ L++ +DVN K DG T L A H+ +E
Sbjct: 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDY-DGWTPLHAAAHWGK------------EEA 247
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVV 119
+L++N D+ + G TA +A I+ L N++
Sbjct: 248 CRILVENLCDMEAVNKVGQTAFDVADE-----DILGYLEELQKKQNLL 290
Score = 55.9 bits (133), Expect = 1e-09
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 14/113 (12%)
Query: 19 WDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDN 78
+R L +GH + + G TAL VA + E++ LL+
Sbjct: 174 ERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGY------------TEVLKLLIQA 221
Query: 79 GADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
DVN K G+T LH A + ++ R L+ + V+ K G+T A
Sbjct: 222 RYDVNIKDYDGWTPLHAAAHWGKEE-ACRILVENLCDMEAVN-KVGQTAFDVA 272
Score = 48.2 bits (113), Expect = 4e-07
Identities = 47/276 (17%), Positives = 81/276 (29%), Gaps = 45/276 (16%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
AA + V LL G D+N DG TAL A ++ + L+ +GA
Sbjct: 42 AVFLAACSSGDTEEVLRLLERGADINYANV-DGLTALHQACIDDNVDMVKFLVENGANIN 100
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
A I L+ GA+ V+
Sbjct: 101 QPDNEGWIP-------------LHAAASCGYLDIAEYLISQGAHVGAVN----------- 136
Query: 132 GKGAREVNTVLLYFINEIFKLMANNDTTILDRLDEMKSLILEVTKEFGPGDYNNFSLLKV 191
+G ++ + E+ + N ++ + + + N+ + V
Sbjct: 137 SEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEE---RIMLRDARQWLNSGHINDV 193
Query: 192 AKNDAGETILDIFFELIGKNDTTILDRLDEM-----KSIKLELTKAFGPGDYNNFSLLKV 246
+G T L + K T +L L + T + ++
Sbjct: 194 RHAKSGGTALHVAAA---KGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRI 250
Query: 247 ---------TKNDAGETILDIAKKRGFPLLEELEKK 273
N G+T D+A + LEEL+KK
Sbjct: 251 LVENLCDMEAVNKVGQTAFDVADEDILGYLEELQKK 286
Score = 47.4 bits (111), Expect = 1e-06
Identities = 19/61 (31%), Positives = 24/61 (39%), Gaps = 12/61 (19%)
Query: 37 NEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMA 96
K+K D A E V LL+ GAD+N+ + G TALH A
Sbjct: 33 KTKVKFDDGAVFLAACSSGD------------TEEVLRLLERGADINYANVDGLTALHQA 80
Query: 97 C 97
C
Sbjct: 81 C 81
>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans
[TaxId: 6239]}
Length = 277
Score = 60.9 bits (146), Expect = 3e-11
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 13/100 (13%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
T L A +N+ +V+YL+ +K DG+T + +A E+
Sbjct: 189 TALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGR------------IEV 236
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLR 111
V L+ GA V AT TA +A + + IV R
Sbjct: 237 VMYLIQQGASVEAVDATDHTARQLAQANNHHN-IVDIFDR 275
Score = 60.9 bits (146), Expect = 3e-11
Identities = 22/93 (23%), Positives = 31/93 (33%), Gaps = 7/93 (7%)
Query: 12 TPLC-AAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKE 70
+P+ + + E + R VN RT L + + LI H AKE
Sbjct: 2 SPIKLHTEAAGSYAITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59
Query: 71 IVDLLLDNGADVNFKSATGFTALHMACRFHDDD 103
+ GADVN T L +A
Sbjct: 60 ----CIAAGADVNAMDCDENTPLMLAVLARRRR 88
Score = 49.0 bits (115), Expect = 2e-07
Identities = 21/126 (16%), Positives = 41/126 (32%), Gaps = 15/126 (11%)
Query: 19 WDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDN 78
+ + + + GRTAL A ++ I L+
Sbjct: 163 KLLVEKGAKVDYDGAARKDSEKY-KGRTALHYAAQVSNMPIVKYLVGE-----------K 210
Query: 79 GADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGARE 137
G++ + + G T + +A + + +V L++ GA VD T T A
Sbjct: 211 GSNKDKQDEDGKTPIMLAAQEGRIE-VVMYLIQQGASVEAVD-ATDHTARQLAQANNHHN 268
Query: 138 VNTVLL 143
+ +
Sbjct: 269 IVDIFD 274
Score = 38.9 bits (89), Expect = 4e-04
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 91 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 143
+ + + +I + R N++D + +T L + E + L+
Sbjct: 2 SPIKLHTEAAGSYAITEPITRESV--NIIDPRHNRTVLHWIASNSSAEKSEDLI 53
>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416
{Legionella pneumophila [TaxId: 446]}
Length = 346
Score = 61.4 bits (148), Expect = 3e-11
Identities = 17/137 (12%), Positives = 35/137 (25%), Gaps = 5/137 (3%)
Query: 10 ELTPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHR--HIAALLIHHG 67
E + N ++ + L N + + +AA+
Sbjct: 46 EAIHIFLPGTKNMEQVRQLLCLYYAHYNRN-AKQLWSDAHKKGIKSEVICFVAAITGCSS 104
Query: 68 AKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDG-KTGKT 126
A + + LLL + V A + A +A ++ +L +
Sbjct: 105 ALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLH-VLNRLCELAPTEIMAMIQAENYH 163
Query: 127 PLLHAGKGAREVNTVLL 143
A + L
Sbjct: 164 AFRLAAENGHLHVLNRL 180
Score = 37.2 bits (85), Expect = 0.002
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 11 LTPLCAAVWDNNIRLVEYLLRTGHDVNEK----MKLDGRTALFVAVHFNHRHIAALLIHH 66
L L + + + +LL + D L +A+ ++ ALL+
Sbjct: 280 LRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI 339
Query: 67 G 67
Sbjct: 340 P 340
>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 154
Score = 58.8 bits (141), Expect = 3e-11
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 17/139 (12%)
Query: 11 LTPLCAAVWDNNIRLVEYLLRTGHDVNEKMKL-----DGRTALFVAVHFNHRHIAALLIH 65
L LC AV +I + G D+ EK+ L TAL H+A +
Sbjct: 7 LHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETAL---------HLAVRSVD 57
Query: 66 HGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGK 125
+ IVD L+ N +++ ++ G TA C D+ ++ LLR A + + ++G+
Sbjct: 58 RTSLHIVDFLVQNSGNLDKQTGKGSTA-LHYCCLTDNAECLKLLLRGKASIEIAN-ESGE 115
Query: 126 TPLLHA-GKGAREVNTVLL 143
TPL A +L
Sbjct: 116 TPLDIAKRLKHEHCEELLT 134
Score = 34.2 bits (77), Expect = 0.008
Identities = 8/29 (27%), Positives = 10/29 (34%)
Query: 43 DGRTALFVAVHFNHRHIAALLIHHGAKEI 71
G T L +A H H LL +
Sbjct: 113 SGETPLDIAKRLKHEHCEELLTQALSGRF 141
>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 301
Score = 59.3 bits (142), Expect = 1e-10
Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 11/127 (8%)
Query: 5 ATINVELTPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLI 64
I +T AA L+ ++++ + + + + +
Sbjct: 184 IIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKP---------NDKNGER 234
Query: 65 HHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTG 124
E +DL +N + + G T L++A R + SIV LL +GA + + K+G
Sbjct: 235 KDSILENLDLKWIIANMLNAQDSNGDTCLNIAAR-LGNISIVDALLDYGADPFIAN-KSG 292
Query: 125 KTPLLHA 131
P+
Sbjct: 293 LRPVDFG 299
Score = 46.2 bits (108), Expect = 3e-06
Identities = 27/205 (13%), Positives = 60/205 (29%), Gaps = 23/205 (11%)
Query: 10 ELTPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAK 69
+ + + T ++N + G T L +
Sbjct: 73 NQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIAN------------L 120
Query: 70 EIVDLLLDNGADVNFKSATGFTALHMACRFHD--DDSIVRKLLRHGAYYNVVDGKTGKTP 127
E+V L+ +G++ + G + L A + + D LL + +++ +T
Sbjct: 121 ELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTI 180
Query: 128 LLHAGKGARE--VNTVLLYFINEIFKLMANNDTTILDRLDEMKSLILEVTKEFGPGDYNN 185
L H + + Y+++ + + + K
Sbjct: 181 LHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILE 240
Query: 186 FSLLKV-------AKNDAGETILDI 203
LK A++ G+T L+I
Sbjct: 241 NLDLKWIIANMLNAQDSNGDTCLNI 265
>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor
I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId:
10090]}
Length = 255
Score = 58.6 bits (140), Expect = 2e-10
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
TPL AV ++E LL+ G D +M GRT L A+ + +A LL HGA E
Sbjct: 194 TPLHLAVEAQAASVLELLLKAGADPTARMY-GGRTPLGSALLRPNPILARLLRAHGAPEP 252
Query: 72 VD 73
D
Sbjct: 253 ED 254
Score = 57.0 bits (136), Expect = 4e-10
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 53 HFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRH 112
R L + A +++LLL GAD + G T L A + + R L H
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPI-LARLLRAH 247
Query: 113 GA 114
GA
Sbjct: 248 GA 249
Score = 49.3 bits (116), Expect = 2e-07
Identities = 45/257 (17%), Positives = 69/257 (26%), Gaps = 29/257 (11%)
Query: 43 DGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDD 102
DG TAL +AV H L+ A ++ ++ G TALH+A +
Sbjct: 8 DGDTALHLAVIHQHEPFLDFLLGFSA---------GHEYLDLQNDLGQTALHLAAI-LGE 57
Query: 103 DSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGAREVNTVLLYFINEIFKLMANNDTTILD 162
S V KL GA V + L A VLL + ++ T
Sbjct: 58 ASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ 117
Query: 163 RLDEMKSLILEVTKEFGPGDYNNFSLLKVAKNDAGETILDIFFELIGKNDTTILDRLDEM 222
S + + + D L + + +
Sbjct: 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177
Query: 223 KS---------IKLELTKAFGPGDYNNFSLLKV---------TKNDAGETILDIAKKRGF 264
+ T + S+L++ + G T L A R
Sbjct: 178 RDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237
Query: 265 P-LLEELEKKLADANND 280
P L L A D
Sbjct: 238 PILARLLRAHGAPEPED 254
Score = 49.3 bits (116), Expect = 2e-07
Identities = 16/142 (11%), Positives = 32/142 (22%), Gaps = 36/142 (25%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLD--GRTALFVAVHFNH------------- 56
T L AV + +++LL + G+TAL +A
Sbjct: 11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70
Query: 57 --------RHIAALLIHHGAKEIVDLLLDNGADVNFKSA-------------TGFTALHM 95
L A +LL ++ T +
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 96 ACRFHDDDSIVRKLLRHGAYYN 117
+ + ++ +
Sbjct: 131 DSQPNPENEEEPRDEDWRLQLE 152
Score = 45.1 bits (105), Expect = 5e-06
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 83 NFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKT--GKTPLLHA 131
+ + G TALH+A H + + LL A + +D + G+T L A
Sbjct: 3 GYVTEDGDTALHLAVI-HQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLA 52
Score = 43.2 bits (100), Expect = 2e-05
Identities = 25/164 (15%), Positives = 40/164 (24%), Gaps = 36/164 (21%)
Query: 15 CAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIH-HGAKEIVD 73
A LL+ T AA+ + E
Sbjct: 83 HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEP 142
Query: 74 LLLDNGADVNFKSATGFTALHMACRFHDDD------------------------------ 103
D + ++ G T LH+A D +
Sbjct: 143 RDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEA 202
Query: 104 ---SIVRKLLRHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 143
S++ LL+ GA G+TPL A + + +L
Sbjct: 203 QAASVLELLLKAGADPTARM-YGGRTPLGSALLRPNPILARLLR 245
>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens)
[TaxId: 9606]}
Length = 221
Score = 55.3 bits (131), Expect = 2e-09
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 43 DGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFH 100
DG + L +A+ + + E++ + + A +NF++ T LH+A +
Sbjct: 1 DGDSFLHLAIIHEEKALT--------MEVIRQVKGDLAFLNFQNNLQQTPLHLAVITN 50
Score = 51.0 bits (120), Expect = 3e-08
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 13 PLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIV 72
L A + +VE L+ G DVN + +GRTAL +AV + ++V
Sbjct: 114 CLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQN------------PDLV 161
Query: 73 DLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGA 114
LLL GADVN + G++ + I ++L +
Sbjct: 162 SLLLKCGADVNRVTYQGYSPYQLTWGRPSTR-IQQQLGQLTL 202
Score = 48.0 bits (112), Expect = 4e-07
Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 1/63 (1%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
T L AV N LV LL+ G DVN G + + I L + +
Sbjct: 147 TALHLAVDLQNPDLVSLLLKCGADVNRVTY-QGYSPYQLTWGRPSTRIQQQLGQLTLENL 205
Query: 72 VDL 74
L
Sbjct: 206 QML 208
Score = 41.4 bits (95), Expect = 5e-05
Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 89 GFTALHMACRFHDDDS---IVRKLLRHGAYYNVVDGKTGKTPLLHA 131
G + LH+A + ++R++ A+ N + +TPL A
Sbjct: 2 GDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQN-NLQQTPLHLA 46
Score = 37.2 bits (84), Expect = 0.002
Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Query: 12 TPLCAAVWDNNIR----LVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRH 58
+ L A+ ++ + +N + +T L +AV N
Sbjct: 4 SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNN-LQQTPLHLAVITNQPE 53
Score = 26.8 bits (57), Expect = 4.0
Identities = 3/30 (10%), Positives = 11/30 (36%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMK 41
+P + R+ + L + + + +
Sbjct: 180 SPYQLTWGRPSTRIQQQLGQLTLENLQMLP 209
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 228
Score = 54.1 bits (128), Expect = 4e-09
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 14/95 (14%)
Query: 13 PLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIV 72
PL AV +N++ +V+ LL+ G +VN +M G +AL A +V
Sbjct: 147 PLIHAVENNSLSMVQLLLQHGANVNAQMY-SGSSALHSASGRGL------------LPLV 193
Query: 73 DLLLDNGADVNFKSATGFTALHMACRFHDDDSIVR 107
L+ +GAD + K+ T L +A D I+R
Sbjct: 194 RTLVRSGADSSLKNCHNDTPLMVARSRRVID-ILR 227
Score = 52.2 bits (123), Expect = 2e-08
Identities = 13/58 (22%), Positives = 22/58 (37%), Gaps = 8/58 (13%)
Query: 43 DGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFH 100
DG T L +AV + +V+L G +++ + T LH+A
Sbjct: 2 DGDTPLHIAVVQGNLPAV--------HRLVNLFQQGGRELDIYNNLRQTPLHLAVITT 51
Score = 43.7 bits (101), Expect = 1e-05
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 14/120 (11%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
T L AV V+ LL G D++ GR+ L AV N + LL+ HGA
Sbjct: 112 TALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANV- 170
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
N + +G +ALH A +VR L+R GA ++ + TPL+ A
Sbjct: 171 -----------NAQMYSGSSALHSASGRGLLP-LVRTLVRSGADSSLKN-CHNDTPLMVA 217
Score = 39.4 bits (90), Expect = 3e-04
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Query: 89 GFTALHMACRFHDDD---SIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
G T LH+A + +V + G ++ + +TPL A
Sbjct: 3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYN-NLRQTPLHLA 47
Score = 37.5 bits (85), Expect = 0.001
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 12 TPLCAAVWDNNIRLVEYLLRT----GHDVNEKMKLDGRTALFVAVHFNHRH 58
TPL AV N+ V L+ G +++ +T L +AV
Sbjct: 5 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNN-LRQTPLHLAVITTLPS 54
>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 209
Score = 49.0 bits (115), Expect = 1e-07
Identities = 45/216 (20%), Positives = 72/216 (33%), Gaps = 24/216 (11%)
Query: 69 KEIVDLLLDNGADVNFKS-ATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTP 127
+++ LL GA++N TG T+LH+A RF D ++LL GA N D
Sbjct: 2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARAD-AAKRLLDAGADANSQDNTGRTPL 60
Query: 128 LLHAGKGAREVNTVLLYFINEIFKLMANNDTTILDRLDEMKSLILEVTKEFGPGDYNNFS 187
A V +LL ++ TT L + + D N
Sbjct: 61 HAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADIN--- 117
Query: 188 LLKVAKNDAGETILDI-----FFELIGKNDTTILDRLDEMKSIKLELTKAFGPGDYNNFS 242
A +++G+T L E + +R + + L A G Y
Sbjct: 118 ----AADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASK 173
Query: 243 LL------KVTKNDAGETILDIAKKRGFP----LLE 268
L + + D+A +R LL+
Sbjct: 174 ALLDNFANREITDHMDRLPRDVASERLHHDIVRLLD 209
Score = 49.0 bits (115), Expect = 2e-07
Identities = 29/119 (24%), Positives = 39/119 (32%), Gaps = 23/119 (19%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIH------ 65
TPL A +VE L+ D+N G+TAL A N+ +L+
Sbjct: 92 TPLILAARLAIEGMVEDLITADADINAADN-SGKTALHWAAAVNNTEAVNILLMHHANRD 150
Query: 66 ---------------HGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKL 109
G+ E LLDN A+ +A D IVR L
Sbjct: 151 AQDDKDETPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHD-IVRLL 208
Score = 44.4 bits (103), Expect = 6e-06
Identities = 12/43 (27%), Positives = 20/43 (46%)
Query: 24 RLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHH 66
+++ LL G ++N M G T+L +A F A L+
Sbjct: 3 QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDA 45
Score = 37.5 bits (85), Expect = 0.001
Identities = 28/186 (15%), Positives = 44/186 (23%), Gaps = 59/186 (31%)
Query: 4 GATINVEL-----TPLCAAVWDNNIRLVEYLL---------------------RTGHDVN 37
GA +N + T L A + LL
Sbjct: 12 GAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGV 71
Query: 38 EKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALH--- 94
++ L R A + L + +V+ L+ AD+N +G TALH
Sbjct: 72 FQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAA 131
Query: 95 -----------------------------MACRFHDDDSIVRKLLRHGAYYNVVDGKTGK 125
+ LL + A + D +
Sbjct: 132 AVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREITD-HMDR 190
Query: 126 TPLLHA 131
P A
Sbjct: 191 LPRDVA 196
>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit
10, gankyrin {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 229
Score = 47.5 bits (111), Expect = 6e-07
Identities = 22/103 (21%), Positives = 36/103 (34%), Gaps = 15/103 (14%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
PL A +++L+E L G G T LF A+ H A LL
Sbjct: 140 IPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLL-------- 191
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGA 114
+ GA+ + G A +A ++ + + L +
Sbjct: 192 ---VEKYGAEYDLVDNKGAKAEDVAL----NEQVKKFFLNNVV 227
Score = 46.7 bits (109), Expect = 1e-06
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHG 67
PL A +N V+ LL + + + DGR L +V F I + L+
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57
Score = 43.7 bits (101), Expect = 1e-05
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 17/71 (23%)
Query: 12 TPLCAAVWDNNIRLVEYLL-RTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKE 70
TPL A+ + + L+ + G + + G A VA++ ++
Sbjct: 174 TPLFHALAEGHGDAAVLLVEKYGAEYDLVDN-KGAKAEDVALN---------------EQ 217
Query: 71 IVDLLLDNGAD 81
+ L+N D
Sbjct: 218 VKKFFLNNVVD 228
Score = 43.3 bits (100), Expect = 1e-05
Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 13/120 (10%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEI 71
T L AV + ++L+ G V K K + L A + LL G
Sbjct: 107 TCLHLAVGKKWFEVSQFLIENGASVRIKDK-FNQIPLHRAASVGSLKLIELLCGLGKS-- 163
Query: 72 VDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
VN++ G+T L A D+ V + ++GA Y++VD G A
Sbjct: 164 ---------AVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVD-NKGAKAEDVA 213
Score = 41.0 bits (94), Expect = 9e-05
Identities = 10/54 (18%), Positives = 14/54 (25%), Gaps = 11/54 (20%)
Query: 46 TALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRF 99
L A N L+H + + K G LH + F
Sbjct: 2 YPLHQACMENEFFKVQELLHSK-----------PSLLLQKDQDGRIPLHWSVSF 44
Score = 37.1 bits (84), Expect = 0.002
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Query: 91 TALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHA 131
LH AC ++ + L + D + G+ PL +
Sbjct: 2 YPLHQACMENEFFKVQELLHSKPSLLLQKD-QDGRIPLHWS 41
>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 130
Score = 42.4 bits (98), Expect = 9e-06
Identities = 12/136 (8%), Positives = 33/136 (24%), Gaps = 17/136 (12%)
Query: 11 LTPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKE 70
L L + + LV+ ++ D + + + L+
Sbjct: 2 LALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG---- 57
Query: 71 IVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPL-L 129
+ + ++ + + L+ GA + +T
Sbjct: 58 ----------VNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADK 107
Query: 130 H--AGKGAREVNTVLL 143
+G + + L
Sbjct: 108 CEEMEEGYTQCSQFLY 123
Score = 38.5 bits (88), Expect = 2e-04
Identities = 10/53 (18%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 19 WDNNIRLVEYLLRTGHDVNEKMKLDGRTA--LFVAVHFNHRHIAALLIHHGAK 69
NN+++ ++L+ +G V D +TA + + + L K
Sbjct: 76 SCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEK 128
>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 153
Score = 42.5 bits (98), Expect = 1e-05
Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 25/141 (17%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAK-- 69
L A V L+ G G + L +A + H +L+ G
Sbjct: 4 KKLLEAARAGQDDEVRILMANGAPFTTDW--LGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61
Query: 70 -------------------EIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLL 110
IV++LL +GADVN K TALH A + + +V L+
Sbjct: 62 ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQE-VVELLI 120
Query: 111 RHGAYYNVVDGKTGKTPLLHA 131
++GA + K KT +
Sbjct: 121 KYGADVHTQS-KFCKTAFDIS 140
Score = 39.8 bits (91), Expect = 1e-04
Identities = 14/50 (28%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 14 LCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALL 63
L A N+ +VE L++ G DV+ + K +TA +++ + +A +L
Sbjct: 104 LHWATEHNHQEVVELLIKYGADVHTQSK-FCKTAFDISIDNGNEDLAEIL 152
Score = 31.8 bits (70), Expect = 0.062
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 13/58 (22%)
Query: 43 DGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFH 100
D L A + V +L+ NGA G + LH+A ++
Sbjct: 1 DLGKKLLEAARAGQ------------DDEVRILMANGAPFT-TDWLGTSPLHLAAQYG 45
>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId:
9606]}
Length = 156
Score = 37.6 bits (85), Expect = 6e-04
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 3/43 (6%)
Query: 58 HIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFH 100
AA G E + LL N +VN ++ G TAL + +
Sbjct: 6 ASAA---ARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGN 45
Score = 36.8 bits (83), Expect = 0.001
Identities = 10/49 (20%), Positives = 23/49 (46%)
Query: 19 WDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHG 67
+ ++R+VE+L++ G TA +A + + +L+ +G
Sbjct: 108 KEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156
Score = 33.7 bits (75), Expect = 0.015
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRH 58
L +A ++ + LL+ +VN + GRTAL V N
Sbjct: 3 NELASAAARGDLEQLTSLLQNNVNVNAQNG-FGRTALQVMKLGNPEI 48
Score = 33.3 bits (74), Expect = 0.016
Identities = 7/31 (22%), Positives = 11/31 (35%), Gaps = 1/31 (3%)
Query: 91 TALHMACRFHDDDSIVRKLLRHGAYYNVVDG 121
L A D + LL++ N +G
Sbjct: 3 NELASAAA-RGDLEQLTSLLQNNVNVNAQNG 32
Score = 32.9 bits (73), Expect = 0.022
Identities = 7/32 (21%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 82 VNFKSATGFTALHMACRFHDDDSIVRKLLRHG 113
V ++ G TA +A + ++ +V + +G
Sbjct: 126 VGHRNHKGDTACDLARLYGRNE-VVSLMQANG 156
Score = 26.8 bits (57), Expect = 2.8
Identities = 4/22 (18%), Positives = 6/22 (27%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTG 33
T A +V + G
Sbjct: 135 TACDLARLYGRNEVVSLMQANG 156
>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo
sapiens) [TaxId: 9606]}
Length = 156
Score = 35.6 bits (80), Expect = 0.003
Identities = 32/154 (20%), Positives = 57/154 (37%), Gaps = 26/154 (16%)
Query: 12 TPLCAAVWDNNIRLVEYLL-RTGHDVNEKMKLDGRTALFVAVHFNHRHIAAL-------- 62
L A +++ V LL R + + G+TAL V + + L
Sbjct: 4 DRLSGAAARGDVQEVRRLLHRELVHPDALNR-FGKTALQVMMFGSTAIALELLKQGASPN 62
Query: 63 ------------LIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLL 110
G + + +L+++GADVN TG +H+A + +
Sbjct: 63 VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA- 121
Query: 111 RHGAYYNVVDGKTGKTPLLHA-GKGAREVNTVLL 143
+ + D G TPL A +GA+++ +L
Sbjct: 122 -AESDLHRRD-ARGLTPLELALQRGAQDLVDILQ 153
Score = 35.2 bits (79), Expect = 0.004
Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 35 DVNEKMKLDGRTALFVAVHFNHRHIAALLIHH 66
D++ + G T L +A+ + + +L H
Sbjct: 125 DLHRRDA-RGLTPLELALQRGAQDLVDILQGH 155
Score = 34.0 bits (76), Expect = 0.010
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 80 ADVNFKSATGFTALHMACRFHDDDSIVRKLLRH 112
+D++ + A G T L +A + D +V L H
Sbjct: 124 SDLHRRDARGLTPLELALQRGAQD-LVDILQGH 155
Score = 27.5 bits (59), Expect = 1.9
Identities = 9/39 (23%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 89 GFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTP 127
L A D + R L R + + ++ + GKT
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALN-RFGKTA 39
>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo
sapiens) [TaxId: 9606]}
Length = 125
Score = 34.5 bits (77), Expect = 0.005
Identities = 19/119 (15%), Positives = 32/119 (26%), Gaps = 21/119 (17%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNE--------------------KMKLDGRTALFVA 51
L A + V LL G + N ++ L A
Sbjct: 5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64
Query: 52 VHFNHRHIAALLIHHGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLL 110
G + + +L GA ++ + A G + +A D + R L
Sbjct: 65 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRD-VARYLR 122
Score = 31.8 bits (70), Expect = 0.041
Identities = 9/27 (33%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 91 TALHMACRFHDDDSIVRKLLRHGAYYN 117
L A + VR LL GA N
Sbjct: 5 DWLATAAARGRVE-EVRALLEAGANPN 30
>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 118
Score = 30.6 bits (67), Expect = 0.088
Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 25/120 (20%)
Query: 12 TPLCAAVWDNNIRLVEYLLRTGHDVNEKMKLDGRTALFVAVHFNHRHIAALLIH------ 65
A+ + ++ V+ + G DVN ++ + + A + LL+
Sbjct: 4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63
Query: 66 --------------HGAKEIVDLLLDNGADVNFKSATGFTALHMACRFHDDDSIVRKLLR 111
G V LLL GAD K G TAL D+ ++ LL+
Sbjct: 64 PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT-----DNQAIKALLQ 118
>d1jeya1 b.131.1.1 (A:254-534) Ku70 subunit middle domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 281
Score = 31.0 bits (70), Expect = 0.15
Identities = 28/168 (16%), Positives = 56/168 (33%), Gaps = 24/168 (14%)
Query: 85 KSATGFTALHMACRFHDDDSIVRKLLRHGAYYNVVDGKTGKTPLLHAGKGAREVNTVL-- 142
S+T F+AL + C + ++ R R V + L L
Sbjct: 124 GSSTLFSALLIKCLEKEVAALCRYTPRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVF 183
Query: 143 LYFINEIFKLMANNDTTILDR-LDEMKSLILEVTKEFGPGDYNNFSLLKVAKN------- 194
L F ++ K+ + +MK+++ ++ + + N L + +N
Sbjct: 184 LPFADDKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFENPVLQQHFRNLEALALD 243
Query: 195 -DAGETILDIF---FELIGKNDTTILDRLDEMKSIKLELTKAFGPGDY 238
E +D+ E + K +++D E + P DY
Sbjct: 244 LMEPEQAVDLTLPKVEAMNKRLGSLVD----------EFKELVYPPDY 281
>d1mxsa_ c.1.10.1 (A:) KDPG aldolase {Pseudomonas putida [TaxId:
303]}
Length = 216
Score = 30.7 bits (69), Expect = 0.18
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Query: 10 ELTPLCAAVWDNNIRLVEYLLRT--GHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHG 67
++ PL A+ IR +E LR+ G + ++ A R + A + G
Sbjct: 30 DILPLADALAAGGIRTLEVTLRSQHGLKAIQVLREQRPELCVGAGTVLDRSMFAAVEAAG 89
Query: 68 AKEIV 72
A+ +V
Sbjct: 90 AQFVV 94
>d1wbha1 c.1.10.1 (A:1-213) KDPG aldolase {Escherichia coli
[TaxId: 562]}
Length = 213
Score = 29.5 bits (66), Expect = 0.41
Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 10 ELTPLCAAVWDNNIRLVEYLLRT--GHDVNEKMKLDGRTALFVAVHFNHRHIAALLIHHG 67
P+ A+ +R++ LRT D + + A+ A + A + G
Sbjct: 28 HAVPMAKALVAGGVRVLNVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAG 87
Query: 68 AK 69
A+
Sbjct: 88 AQ 89
>d1t47a1 d.32.1.3 (A:16-178) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Streptomyces avermitilis [TaxId: 33903]}
Length = 163
Score = 27.9 bits (61), Expect = 1.4
Identities = 10/70 (14%), Positives = 21/70 (30%), Gaps = 6/70 (8%)
Query: 52 VHFNHRHIAALLIHHGAKEIV------DLLLDNGADVNFKSATGFTALHMACRFHDDDSI 105
R A+ ++ +G+ V + + G + +A D +
Sbjct: 39 PENGSRETASYVLTNGSARFVLTSVIKPATPWGHFLADHVAEHGDGVVDLAIEVPDARAA 98
Query: 106 VRKLLRHGAY 115
+ HGA
Sbjct: 99 HAYAIEHGAR 108
>d1yt8a4 c.46.1.2 (A:243-372) Thiosulfate sulfurtransferase PA2603
{Pseudomonas aeruginosa [TaxId: 287]}
Length = 130
Score = 26.9 bits (58), Expect = 1.9
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Query: 247 TKNDAGETILDIAKKRGFPLL--EELEKKLADANNDTTILD 285
T+ A + +A + G L L + + + T +LD
Sbjct: 5 TRKAAAQRARAVADRAGVERLDLAGLAQWQDEHDRTTYLLD 45
>d2b7ma1 a.118.17.2 (A:73-623) Exocyst complex component EXO70
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 551
Score = 27.2 bits (60), Expect = 3.6
Identities = 11/74 (14%), Positives = 26/74 (35%)
Query: 135 AREVNTVLLYFINEIFKLMANNDTTILDRLDEMKSLILEVTKEFGPGDYNNFSLLKVAKN 194
+ + K++ +N E+ I +V K + N++LL+
Sbjct: 204 LSPLISAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKELQNYNLLQDCTQ 263
Query: 195 DAGETILDIFFELI 208
+ + +F + I
Sbjct: 264 EVRQVTQSLFRDAI 277
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis
cinerea) [TaxId: 5346]}
Length = 150
Score = 25.6 bits (56), Expect = 5.8
Identities = 9/35 (25%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Query: 76 LDNGAD---VNFKSATGFTALHMACRFHDDDSIVR 107
++ NF SA LH++ R ++ IV
Sbjct: 30 FNSKGGTTVFNFLSAGENILLHISIRP-GENVIVF 63
>d1wa3a1 c.1.10.1 (A:2-203) KDPG aldolase {Thermotoga maritima
[TaxId: 2336]}
Length = 202
Score = 25.7 bits (56), Expect = 6.7
Identities = 13/66 (19%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 10 ELTPLCAAVWDNNIRLVEYLLRTGHD---VNEKMKLDGRTALFVAVHFNHRHIAALLIHH 66
E AV++ + L+E + E L + A+ A +
Sbjct: 22 EAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVES 81
Query: 67 GAKEIV 72
GA+ IV
Sbjct: 82 GAEFIV 87
>d1sqda1 d.32.1.3 (A:14-180) 4-hydroxyphenylpyruvate dioxygenase,
HppD {Mouse-ear cress (Arabidopsis thaliana) [TaxId:
3702]}
Length = 167
Score = 25.2 bits (54), Expect = 9.8
Identities = 11/89 (12%), Positives = 24/89 (26%), Gaps = 10/89 (11%)
Query: 36 VNEKMKLDGRTALFVAVHFNHRHIAALLIHHGAKEIVDLLL----------DNGADVNFK 85
+ G + + + + D+G+ +F
Sbjct: 39 SAKSDLSTGNMVHASYLLTSGDLRFLFTAPYSPSLSAGEIKPTTTASIPSFDHGSCRSFF 98
Query: 86 SATGFTALHMACRFHDDDSIVRKLLRHGA 114
S+ G +A D +S + +GA
Sbjct: 99 SSHGLGVRAVAIEVEDAESAFSISVANGA 127
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.139 0.398
Gapped
Lambda K H
0.267 0.0700 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,256,807
Number of extensions: 60602
Number of successful extensions: 463
Number of sequences better than 10.0: 1
Number of HSP's gapped: 347
Number of HSP's successfully gapped: 103
Length of query: 338
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 252
Effective length of database: 1,226,816
Effective search space: 309157632
Effective search space used: 309157632
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.3 bits)