BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5584
(2014 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2E9E|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Nitrate At 3.25 A Resolution
pdb|2E9E|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Nitrate At 3.25 A Resolution
pdb|2OJV|A Chain A, Crystal Structure Of A Ternary Complex Of Goat
Lactoperoxidase With Cyanide And Iodide Ions At 2.4 A
Resolution
pdb|2EFB|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Phosphate At 2.94 A Resolution
pdb|2EFB|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Phosphate At 2.94 A Resolution
pdb|2EHA|A Chain A, Crystal Structure Of Goat Lactoperoxidase Complexed With
Formate Anion At 3.3 A Resolution
pdb|2EHA|B Chain B, Crystal Structure Of Goat Lactoperoxidase Complexed With
Formate Anion At 3.3 A Resolution
Length = 595
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 225/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R QIN V+S++D S +Y + + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPSLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + P FNN P + T + + GD+R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P E ++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ ++ ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+AV L + K++L K + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQAV---LKNKVLAKKLLDLYK-----TPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 133 RSLVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFT 189
R +++ G A K++ + + DNID++IGG E GPL
Sbjct: 453 RGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLA 512
Query: 190 NIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDI 238
++ QF ++RD DRFW+EN G+FT + ++++K++ +I + T I
Sbjct: 513 CLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICDNTHI 559
>pdb|2R5L|A Chain A, Crystal Structure Of Lactoperoxidase At 2.4a Resolution
pdb|3N8F|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Thiocyanate At 3.2 A Resolution
pdb|3N8F|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Thiocyanate At 3.2 A Resolution
pdb|3NIU|A Chain A, Crystal Structure Of The Complex Of Dimeric Goat
Lactoperoxidase With Diethylene Glycol At 2.9 A
Resolution
pdb|3NIU|B Chain B, Crystal Structure Of The Complex Of Dimeric Goat
Lactoperoxidase With Diethylene Glycol At 2.9 A
Resolution
pdb|3NAK|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Hypothiocyanite At 3.3 A Resolution
pdb|3NAK|B Chain B, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Hypothiocyanite At 3.3 A Resolution
pdb|3QF1|A Chain A, Crystal Structure Of The Complex Of Caprine
Lactoperoxidase With Diethylenediamine At 2.6a
Resolution
pdb|3RKE|A Chain A, Crystal Structure Of Goat Lactoperoxidase Complexed With A
Tightly Bound Inhibitor, 4-Aminophenyl-4h-Imidazole-1-Yl
Methanone At 2.3 A Resolution
pdb|3R55|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Pyrazinamide At 2.1 A Resolution
pdb|3SXV|A Chain A, Crystal Structure Of The Complex Of Goat Lactoperoxidase
With Amitrole At 2.1 A Resolution
Length = 595
Score = 161 bits (407), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 224/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R QIN V+S++D S +Y + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLARDQINAVTSFLDASLVYGSEPXLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + P FNN P + T + + GD+R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYPPFNNVKPSPCEFINTTAHVPCFQAGDSRASEQILLATVHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P E ++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKRLNPHWDGEMLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ ++ ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKNSKLMNQNKMVTSELRNKLFQPTHKVHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+AV L + K++L K + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQAV---LKNKVLAKKLLDLYK-----TPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 133 RSLVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFT 189
R +++ G A K++ + + DNID++IGG E GPL
Sbjct: 453 RGFCGLSQPKTLKGLQAVLKNKVLAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLA 512
Query: 190 NIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDI 238
++ QF ++RD DRFW+EN G+FT + ++++K++ +I + T I
Sbjct: 513 CLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICDNTHI 559
>pdb|2IKC|A Chain A, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
pdb|2IKC|B Chain B, Crystal Structure Of Sheep Lactoperoxidase At 3.25 A
Resolution Reveals The Binding Sites For Formate
Length = 595
Score = 157 bits (397), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 226/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R QIN V+S++D S +Y + + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLARDQINSVTSFLDASLVYGSEPSLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + P FNN P + T + + GD+R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYPPFNNMKPSPCEFINTTARVPCFQAGDSRASEQILLATVHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKRLNPHWDGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
P Y+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPRYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P P L P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQPR---GPEAEL-----------PLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ ++ ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKKSKLMNQNKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+AV L + K++L K + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQAV---LKNKILAKKLLDLYK-----TPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 133 RSLVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFT 189
R +++ G A KI+ + + DNID++IGG E GPL
Sbjct: 453 RGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLA 512
Query: 190 NIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDI 238
++ QF ++RD DRFW+EN G+FT + ++++K++ +I + T I
Sbjct: 513 CLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICDNTHI 559
>pdb|3R5Q|A Chain A, Crystal Structure Of Sheep Lactoperoxidase In Complex With
Tetrahydrofuran At 2.7 A Resolution
Length = 595
Score = 157 bits (396), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 225/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R QIN V+S++D S +Y + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLARDQINSVTSFLDASLVYGSEPXLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + P FNN P + T + + GD+R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYPPFNNMKPSPCEFINTTARVPCFQAGDSRASEQILLATVHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKRLNPHWDGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
P Y+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPRYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P P L P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQPR---GPEAEL-----------PLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ ++ ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKKSKLMNQNKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+AV L + K++L K + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQAV---LKNKILAKKLLDLYK-----TPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 5/109 (4%)
Query: 133 RSLVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFT 189
R +++ G A KI+ + + DNID++IGG E GPL
Sbjct: 453 RGFCGLSQPKTLKGLQAVLKNKILAKKLLDLYKTPDNIDIWIGGNAEPMVERGRVGPLLA 512
Query: 190 NIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDI 238
++ QF ++RD DRFW+EN G+FT + ++++K++ +I + T I
Sbjct: 513 CLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICDNTHI 559
>pdb|2GJ1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.3a
Resolution
Length = 583
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 225/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y + + + +R+ ++ L
Sbjct: 143 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSS-PLGLM 201
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 202 AVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 261
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P + E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 262 NRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 312
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 313 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 332
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 333 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 373
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ +D ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 374 IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 433
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+ V K + K+L Y + DNID++IGG
Sbjct: 434 MPGYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGN 485
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 486 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 543
Query: 931 ATDI 934
T I
Sbjct: 544 NTHI 547
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 462 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 521
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K++ +I + T I
Sbjct: 522 --GVFTEKQRDSLQKVSFSRLICDNTHI 547
>pdb|2IPS|A Chain A, Crystal Structure Of A Ternary Complex Of Bovine
Lactoperoxidase With Thiocyanate And Iodide At 3.1 A
Resolution
pdb|2NQX|A Chain A, Crystal Structure Of Bovine Lactoperoxidase With Iodide
Ions At 2.9a Resolution
Length = 595
Score = 156 bits (394), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 225/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y + + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P + E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ +D ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+ V K + K+L Y + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 474 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 533
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K++ +I + T I
Sbjct: 534 --GVFTEKQRDSLQKVSFSRLICDNTHI 559
>pdb|2PT3|A Chain A, Crystal Structure Of Bovine Lactoperoxidase At 2.34 A
Resolution Reveals Multiple Anion Binding Sites
pdb|2PUM|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complex With
Catechol And Iodide At 2.7 A Resolution
pdb|2QPK|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Salicylhydroxamic Acid At 2.34 A Resolution
pdb|2QQT|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Acetyl Salicylic Acid At 2.5 A Resolution
pdb|2QRB|A Chain A, Crystal Structure Of Chloride Saturated Bovine
Lactoperoxidase At 2.5 A Resolution Shows Multiple
Halide Binding Sites
pdb|3BXI|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Its Catalyzed Product Hypothiocyanate Ion At 2.3a
Resolution
pdb|3ERI|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3GC1|A Chain A, Crystal Structure Of Bovine Lactoperoxidase
pdb|3GCJ|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCK|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3GCL|A Chain A, Mode Of Ligand Binding And Assignment Of Subsites In
Mammalian Peroxidases: Crystal Structure Of
Lactoperoxidase Complexes With Acetyl Salycylic Acid,
Salicylhydroxamic Acid And Benzylhydroxamic Acid
pdb|3I6N|A Chain A, Mode Of Binding Of The Tuberculosis Prodrug Isoniazid To
Peroxidases: Crystal Structure Of Bovine Lactoperoxidase
With Isoniazid At 2.7 Resolution
pdb|3KRQ|A Chain A, Crystal Structure Of The Complex Of Lactoperoxidase With A
Potent Inhibitor Amino-Triazole At 2.2a Resolution
pdb|3NYH|A Chain A, Crystal Structure Of Lactoperoxidase Complexed
Simultaneously With Thiocyanate Ion, Iodide Ion, Bromide
Ion, Chloride Ion Through The Substrate Diffusion
Channel Reveals A Preferential Queue Of The Inorganic
Substrates Towards The Distal Heme Cavity
pdb|3OGW|A Chain A, Structure Of The Complex Of Bovine Lactoperoxidase With
Indomethacin At 1.9a Resolution
pdb|3PY4|A Chain A, Crystal Structure Of Bovine Lactoperoxidase In Complex
With Paracetamol At 2.4a Resolution
pdb|3Q9K|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Phenyl Isothiocyanate At 1.7 A Resolution
pdb|3QL6|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Nimesulide At 1.7 A Resolution
pdb|3S4F|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 1h- Pyrazolo[4,3-C] Pyridine At 1.99 A Resolution
pdb|3R4X|A Chain A, Crystal Structure Of Bovine Lactoperoxidase Complexed With
Pyrazine-2- Carboxamide At 2 A Resolution
pdb|3R5O|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With 4- Allyl-2-Methoxyphenol At 2.6 A Resolution
pdb|3TGY|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Ascorbic Acid At 2.35 A Resolution
pdb|3TUW|A Chain A, Crystal Structure Of Lactoperoxidase Complexed With
Pyrazinamide At 2.2a Resolution
pdb|3UBA|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With P- Hydroxycinnamic Acid At 2.6 A Resolution
pdb|3V6Q|A Chain A, Crystal Structure Of The Complex Of Bovine Lactoperoxidase
With Carbon Monoxide At 2.0 A Resolution
pdb|4GM7|A Chain A, Structure Of Cinnamic Acid Bound Bovine Lactoperoxidase At
2.6a Resolution.
pdb|4GN6|A Chain A, Structure Of Paracetamol Bound Bovine Lactoperoxidase At
2.45a Resolution
Length = 595
Score = 155 bits (392), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 224/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPXLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P + E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ +D ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+ V K + K+L Y + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 474 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 533
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K++ +I + T I
Sbjct: 534 --GVFTEKQRDSLQKVSFSRLICDNTHI 559
>pdb|2GJM|A Chain A, Crystal Structure Of Buffalo Lactoperoxidase At 2.75a
Resolution
Length = 583
Score = 154 bits (389), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 218/482 (45%), Gaps = 84/482 (17%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y + + + +R+ ++ L
Sbjct: 143 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSS-PLGLM 201
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 202 AVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 261
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P + E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 262 NRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 312
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 313 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 332
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 333 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTWRIIK 376
Query: 757 VMTYSTLEEILMGMASQLSEKEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNGIA 815
L L+ S+L +D ++ S++R+KLF P ++ DL A+N+ R RD+G+
Sbjct: 377 DGGIDPLTRGLLAKKSKLM-NQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMP 435
Query: 816 DYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLE 875
YN+ R L + K+ L+ V K + K+L Y + DNID++IGG E
Sbjct: 436 GYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGNAE 487
Query: 876 ---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNAT 932
GPL ++ QF ++RD DRFW+EN G+FT + ++++K + +I + T
Sbjct: 488 PMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKFSFSRLICDNT 545
Query: 933 DI 934
I
Sbjct: 546 HI 547
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 462 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 521
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K + +I + T I
Sbjct: 522 --GVFTEKQRDSLQKFSFSRLICDNTHI 547
>pdb|2O86|A Chain A, Crystal Structure Of A Ternary Complex Of Buffalo
Lactoperoxidase With Nitrate And Iodide At 2.8 A
Resolution
Length = 595
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 129/484 (26%), Positives = 225/484 (46%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y + + + +++ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLQNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYLPFNNRKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P+ E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKKLNPQWDGEKLYQEARKILGAFVQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ +D ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+ V K + K+L Y + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKMSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 474 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 533
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K++ +I + T I
Sbjct: 534 --GVFTEKQRDSLQKMSFSRLICDNTHI 559
>pdb|3ERH|A Chain A, First Structural Evidence Of Substrate Specificity In
Mammalian Peroxidases: Crystal Structures Of Substrate
Complexes With Lactoperoxidases From Two Different
Species
pdb|3FAQ|A Chain A, Crystal Struture Of Lactoperoxidase Complex With Cyanide
Length = 595
Score = 153 bits (387), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 132/482 (27%), Positives = 217/482 (45%), Gaps = 84/482 (17%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y + + +R+ ++ L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPXLASRLRNLSS-PLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P + E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTWRIIK 388
Query: 757 VMTYSTLEEILMGMASQLSEKEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNGIA 815
L L+ S+L +D ++ S++R+KLF P ++ DL A+N+ R RD+G+
Sbjct: 389 DGGIDPLTRGLLAKKSKLM-NQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMP 447
Query: 816 DYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLE 875
YN+ R L + K+ L+ V K + K+L Y + DNID++IGG E
Sbjct: 448 GYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGNAE 499
Query: 876 ---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNAT 932
GPL ++ QF ++RD DRFW+EN G+FT + ++++K + +I + T
Sbjct: 500 PMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKFSFSRLICDNT 557
Query: 933 DI 934
I
Sbjct: 558 HI 559
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 474 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 533
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K + +I + T I
Sbjct: 534 --GVFTEKQRDSLQKFSFSRLICDNTHI 559
>pdb|2Z5Z|A Chain A, Crystal Structure Of The Complex Of Buffalo
Lactoperoxidase With Fluoride Ion At 3.5a Resolution
pdb|3FNL|A Chain A, Crystal Structure Of The Complex Of Buffalo
Lactoperoxidase With Salicylhydroxamic Acid At 2.48 A
Resolution
Length = 595
Score = 153 bits (386), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/484 (27%), Positives = 222/484 (45%), Gaps = 88/484 (18%)
Query: 460 GKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATD 519
GK +PF RAG+ T + R+QIN V+S++D S +Y SE L + + L
Sbjct: 155 GKCMPFFRAGFVCPTPPYQSLAREQINAVTSFLDASLVYG-SEPXLASRLQNLSSPLGLM 213
Query: 520 ASGKMPVKNTMRVPLFNNPVPHS---LRTLSPERLYLLGDARSNQNPALLAFSILFFRWH 576
A + + + FNN P + T + +L GD R+++ L L R H
Sbjct: 214 AVNQEAWDHGLAYLPFNNRKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREH 273
Query: 577 NVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHP 636
N +A +++ +P+ E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 274 NRLARELKKLNPQWDGEKLYQEARKILGAFVQIITFRDYLPIVLGSEMQKW--------- 324
Query: 637 GISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQT 696
PPY+GY V P IS+VF T
Sbjct: 325 ---------------------------------------IPPYQGYNNSVDPRISNVF-T 344
Query: 697 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTN 756
AFRFGH +P + R DE N++P W P L N W
Sbjct: 345 FAFRFGHMEVPSTVSRLDE--NYQP--------------WGPEAELPLHTLFFNTW---R 385
Query: 757 VMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNG 813
++ ++ ++ G+ ++ S+ +D ++ S++R+KLF P ++ DL A+N+ R RD+G
Sbjct: 386 IIKDGGIDPLVRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHG 445
Query: 814 IADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGM 873
+ YN+ R L + K+ L+ V K + K+L Y + DNID++IGG
Sbjct: 446 MPGYNSWRGFCGLSQPKTLKGLQTV-------LKNKILAKKLMDLY-KTPDNIDIWIGGN 497
Query: 874 LE---SHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVN 930
E GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I +
Sbjct: 498 AEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKMSFSRLICD 555
Query: 931 ATDI 934
T I
Sbjct: 556 NTHI 559
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 154 KIVLRGYYSYGNSLDNIDLYIGGMLE---SHEGPGPLFTNIILEQFTRLRDADRFWFENT 210
KI+ + + DNID++IGG E GPL ++ QF ++RD DRFW+EN
Sbjct: 474 KILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP 533
Query: 211 ENGMFTAAEVEAIRKITLWDIIVNATDI 238
G+FT + ++++K++ +I + T I
Sbjct: 534 --GVFTEKQRDSLQKMSFSRLICDNTHI 559
>pdb|1MYP|C Chain C, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MYP|D Chain D, X-Ray Crystal Structure Of Canine Myeloperoxidase At 3
Angstroms Resolution
pdb|1MHL|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
pdb|1MHL|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Crystallized In Space Group P2(1) At Ph 5.5 And 20 Deg C
Length = 466
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 224/507 (44%), Gaps = 110/507 (21%)
Query: 463 IPFHRAGYDRSTGTSPNSP---RQQINRVSSWIDGSFIYSTSEAWLNAMRSFTN--GSLA 517
IPF R S P S R QIN ++S++D S +Y + E +R+ +N G LA
Sbjct: 32 IPFFR-----SCPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLA 86
Query: 518 TD------ASGKMPVKNTMRVPLFNNPVPHSLRTLSPERL--YLLGDARSNQNPALLAFS 569
+ +P N L ++P L T R+ +L GD RS++ P L +
Sbjct: 87 VNQRFQDNGRALLPFDN-----LHDDPC---LLTNRSARIPCFLAGDTRSSEMPELTSMH 138
Query: 570 ILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRG 629
L R HN +A +++ +P E ++Q+ R++V A +Q + +Y+P LG
Sbjct: 139 TLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG-------- 190
Query: 630 YKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPG 689
PT P YR Y V P
Sbjct: 191 ---------------------------------------PTAMRKYLPTYRSYNDSVDPR 211
Query: 690 ISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCS 749
I++VF T AFR+GH+LI P ++R D N + +P + L
Sbjct: 212 IANVF-TNAFRYGHTLIQPFMFRLD-------------------NRYQPMEPNPRVPLSR 251
Query: 750 NWWDSTNVMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGPNEFSRRDLGALNIM 807
++ S V+ ++ IL G+ + ++ +++ + +IR++LF DL ALN+
Sbjct: 252 VFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQ 311
Query: 808 RGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNID 867
R RD+G+ YN R L + ++ L V ++ ++L YG +NID
Sbjct: 312 RSRDHGLPGYNAWRRFCGLPQPETVGQLGTV-------LRNLKLARKLMEQYGTP-NNID 363
Query: 868 LYIGGMLESHEGPG---PLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITL 924
+++GG+ E + G PL II QF +LRD DRFW+EN G+F+ + +A+ +I+L
Sbjct: 364 IWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWEN--EGVFSMQQRQALAQISL 421
Query: 925 WDIIVNATDIGADAIQKNVFFWNATDP 951
II + T G + KN F + + P
Sbjct: 422 PRIICDNT--GITTVSKNNIFMSNSYP 446
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 147 GAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLESHEGPG---PLFTNIILEQFTRLRDAD 203
G +K+ + YG +NID+++GG+ E + G PL II QF +LRD D
Sbjct: 340 GTVLRNLKLARKLMEQYGTP-NNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGD 398
Query: 204 RFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDP 255
RFW+EN G+F+ + +A+ +I+L II + T G + KN F + + P
Sbjct: 399 RFWWEN--EGVFSMQQRQALAQISLPRIICDNT--GITTVSKNNIFMSNSYP 446
>pdb|3F9P|C Chain C, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3F9P|D Chain D, Crystal Structure Of Myeloperoxidase From Human Leukocytes
pdb|3ZS0|C Chain C, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS0|D Chain D, Human Myeloperoxidase Inactivated By Tx2
pdb|3ZS1|C Chain C, Human Myeloperoxidase Inactivated By Tx5
pdb|3ZS1|D Chain D, Human Myeloperoxidase Inactivated By Tx5
Length = 467
Score = 152 bits (385), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 224/507 (44%), Gaps = 110/507 (21%)
Query: 463 IPFHRAGYDRSTGTSPNSP---RQQINRVSSWIDGSFIYSTSEAWLNAMRSFTN--GSLA 517
IPF R S P S R QIN ++S++D S +Y + E +R+ +N G LA
Sbjct: 32 IPFFR-----SXPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLA 86
Query: 518 TD------ASGKMPVKNTMRVPLFNNPVPHSLRTLSPERL--YLLGDARSNQNPALLAFS 569
+ +P N L ++P L T R+ +L GD RS++ P L +
Sbjct: 87 VNQRFQDNGRALLPFDN-----LHDDPC---LLTNRSARIPCFLAGDTRSSEMPELTSMH 138
Query: 570 ILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRG 629
L R HN +A +++ +P E ++Q+ R++V A +Q + +Y+P LG
Sbjct: 139 TLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG-------- 190
Query: 630 YKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPG 689
PT P YR Y V P
Sbjct: 191 ---------------------------------------PTAMRKYLPTYRSYNDSVDPR 211
Query: 690 ISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCS 749
I++VF T AFR+GH+LI P ++R D N + +P + L
Sbjct: 212 IANVF-TNAFRYGHTLIQPFMFRLD-------------------NRYQPMEPNPRVPLSR 251
Query: 750 NWWDSTNVMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGPNEFSRRDLGALNIM 807
++ S V+ ++ IL G+ + ++ +++ + +IR++LF DL ALN+
Sbjct: 252 VFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQ 311
Query: 808 RGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNID 867
R RD+G+ YN R L + ++ L V ++ ++L YG +NID
Sbjct: 312 RSRDHGLPGYNAWRRFCGLPQPETVGQLGTV-------LRNLKLARKLMEQYGTP-NNID 363
Query: 868 LYIGGMLESHEGPG---PLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITL 924
+++GG+ E + G PL II QF +LRD DRFW+EN G+F+ + +A+ +I+L
Sbjct: 364 IWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWEN--EGVFSMQQRQALAQISL 421
Query: 925 WDIIVNATDIGADAIQKNVFFWNATDP 951
II + T G + KN F + + P
Sbjct: 422 PRIICDNT--GITTVSKNNIFMSNSYP 446
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 147 GAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLESHEGPG---PLFTNIILEQFTRLRDAD 203
G +K+ + YG +NID+++GG+ E + G PL II QF +LRD D
Sbjct: 340 GTVLRNLKLARKLMEQYGTP-NNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGD 398
Query: 204 RFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDP 255
RFW+EN G+F+ + +A+ +I+L II + T G + KN F + + P
Sbjct: 399 RFWWEN--EGVFSMQQRQALAQISLPRIICDNT--GITTVSKNNIFMSNSYP 446
>pdb|1CXP|C Chain C, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1CXP|D Chain D, Cryogenic Crystal Structure Of Human Myeloperoxidase
Isoform C
pdb|1D2V|C Chain C, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D2V|D Chain D, Crystal Structure Of Bromide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D7W|C Chain C, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D7W|D Chain D, Crystal Structure Of Human Myeloperoxidase Isoform C
Complexed With Cyanide And Bromide At Ph 4.0
pdb|1D5L|C Chain C, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1D5L|D Chain D, Crystal Structure Of Cyanide-Bound Human Myeloperoxidase
Isoform C At Ph 5.5
pdb|1DNU|C Chain C, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNU|D Chain D, Structural Analyses Of Human Myeloperoxidase-Thiocyanate
Complex
pdb|1DNW|C Chain C, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|1DNW|D Chain D, Human Myeloperoxidase-Cyanide-Thiocyanate Complex
pdb|4DL1|C Chain C, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|D Chain D, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|G Chain G, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|H Chain H, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|K Chain K, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|L Chain L, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|O Chain O, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
pdb|4DL1|P Chain P, Crystal Structure Of Human Myeloperoxidase With Covalent
Thioxanthine Analog
Length = 466
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 138/507 (27%), Positives = 224/507 (44%), Gaps = 110/507 (21%)
Query: 463 IPFHRAGYDRSTGTSPNSP---RQQINRVSSWIDGSFIYSTSEAWLNAMRSFTN--GSLA 517
IPF R S P S R QIN ++S++D S +Y + E +R+ +N G LA
Sbjct: 32 IPFFR-----SXPACPGSNITIRNQINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLA 86
Query: 518 TD------ASGKMPVKNTMRVPLFNNPVPHSLRTLSPERL--YLLGDARSNQNPALLAFS 569
+ +P N L ++P L T R+ +L GD RS++ P L +
Sbjct: 87 VNQRFQDNGRALLPFDN-----LHDDPC---LLTNRSARIPCFLAGDTRSSEMPELTSMH 138
Query: 570 ILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRG 629
L R HN +A +++ +P E ++Q+ R++V A +Q + +Y+P LG
Sbjct: 139 TLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG-------- 190
Query: 630 YKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPG 689
PT P YR Y V P
Sbjct: 191 ---------------------------------------PTAMRKYLPTYRSYNDSVDPR 211
Query: 690 ISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCS 749
I++VF T AFR+GH+LI P ++R D N + +P + L
Sbjct: 212 IANVF-TNAFRYGHTLIQPFMFRLD-------------------NRYQPMEPNPRVPLSR 251
Query: 750 NWWDSTNVMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGPNEFSRRDLGALNIM 807
++ S V+ ++ IL G+ + ++ +++ + +IR++LF DL ALN+
Sbjct: 252 VFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQ 311
Query: 808 RGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNID 867
R RD+G+ YN R L + ++ L V ++ ++L YG +NID
Sbjct: 312 RSRDHGLPGYNAWRRFCGLPQPETVGQLGTV-------LRNLKLARKLMEQYGTP-NNID 363
Query: 868 LYIGGMLESHEGPG---PLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITL 924
+++GG+ E + G PL II QF +LRD DRFW+EN G+F+ + +A+ +I+L
Sbjct: 364 IWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWEN--EGVFSMQQRQALAQISL 421
Query: 925 WDIIVNATDIGADAIQKNVFFWNATDP 951
II + T G + KN F + + P
Sbjct: 422 PRIICDNT--GITTVSKNNIFMSNSYP 446
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 8/112 (7%)
Query: 147 GAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLESHEGPG---PLFTNIILEQFTRLRDAD 203
G +K+ + YG +NID+++GG+ E + G PL II QF +LRD D
Sbjct: 340 GTVLRNLKLARKLMEQYGTP-NNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGD 398
Query: 204 RFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDP 255
RFW+EN G+F+ + +A+ +I+L II + T G + KN F + + P
Sbjct: 399 RFWWEN--EGVFSMQQRQALAQISLPRIICDNT--GITTVSKNNIFMSNSYP 446
>pdb|3A1F|A Chain A, The Crystal Structure Of Nadph Binding Domain Of Gp91(Phox)
Length = 186
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 104/198 (52%), Gaps = 19/198 (9%)
Query: 1823 IRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLW 1882
I ++GPFG ++D + +EV ++VG GIGVTP+ASIL V+ N + + KK+YF W
Sbjct: 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKS-VWYKYCNNATNLKLKKIYFYW 59
Query: 1883 ICPSHKHFEWFIDVLR----DVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHF-- 1936
+C FEWF D+L+ +++++ L +I++T + NHF
Sbjct: 60 LCRDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLTGWDES----------QANHFAV 109
Query: 1937 QRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIM-SACE 1995
+ + TGLK +GRP+ + K + +H ++IGVF CGP L +++ +
Sbjct: 110 HHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPN-TRIGVFLCGPEALAETLSKQSIS 168
Query: 1996 EVNKGRKLPYFIHHFENF 2013
G + +FI + ENF
Sbjct: 169 NSESGPRGVHFIFNKENF 186
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B,
Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 36 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 94
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D++G I GEL ++L+ +V +L D+Q+ +++D +A D ++++
Sbjct: 95 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVDKTIINADKDGDGRISFE 150
Query: 1474 DF 1475
+F
Sbjct: 151 EF 152
Score = 64.7 bits (156), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 36 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 94
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F + D D++G I GEL ++L+ +V +L D+Q+ +++D
Sbjct: 95 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVD 133
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 36 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 94
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLV 136
F + D D++G I GEL ++L+ +V
Sbjct: 95 FRIYDMDKDGYISNGELFQVLKMMV 119
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 80 DKDGDGRISFQEFLDTV 96
DKDGDGRISF+EF V
Sbjct: 140 DKDGDGRISFEEFCAVV 156
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1223 DKDGDGRISFQEFLDTV 1239
DKDGDGRISF+EF V
Sbjct: 140 DKDGDGRISFEEFCAVV 156
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1382 DKDGDGRISFQEFLDTV 1398
DKDGDGRISF+EF V
Sbjct: 140 DKDGDGRISFEEFCAVV 156
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 37 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 95
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D++G I GEL ++L+ +V +L D+Q+ +++D +A D ++++
Sbjct: 96 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVDKTIINADKDGDGRISFE 151
Query: 1474 DF 1475
+F
Sbjct: 152 EF 153
Score = 64.7 bits (156), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 37 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 95
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F + D D++G I GEL ++L+ +V +L D+Q+ +++D
Sbjct: 96 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVD 134
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 37 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 95
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLV 136
F + D D++G I GEL ++L+ +V
Sbjct: 96 FRIYDMDKDGYISNGELFQVLKMMV 120
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 80 DKDGDGRISFQEFLDTV 96
DKDGDGRISF+EF V
Sbjct: 141 DKDGDGRISFEEFCAVV 157
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1223 DKDGDGRISFQEFLDTV 1239
DKDGDGRISF+EF V
Sbjct: 141 DKDGDGRISFEEFCAVV 157
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1382 DKDGDGRISFQEFLDTV 1398
DKDGDGRISF+EF V
Sbjct: 141 DKDGDGRISFEEFCAVV 157
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 69.7 bits (169), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 22 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 80
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D++G I GEL ++L+ +V +L D+Q+ +++D +A D ++++
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 1474 DF 1475
+F
Sbjct: 137 EF 138
Score = 64.7 bits (156), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 22 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 80
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F + D D++G I GEL ++L+ +V +L D+Q+ +++D
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVD 119
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 22 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 80
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLV 136
F + D D++G I GEL ++L+ +V
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMV 105
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 80 DKDGDGRISFQEFLDTV 96
DKDGDGRISF+EF V
Sbjct: 126 DKDGDGRISFEEFCAVV 142
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1223 DKDGDGRISFQEFLDTV 1239
DKDGDGRISF+EF V
Sbjct: 126 DKDGDGRISFEEFCAVV 142
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1382 DKDGDGRISFQEFLDTV 1398
DKDGDGRISF+EF V
Sbjct: 126 DKDGDGRISFEEFCAVV 142
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 69.3 bits (168), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 72/122 (59%), Gaps = 6/122 (4%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 23 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 81
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D++G I GEL ++L+ +V +L D+Q+ +++D +A D ++++
Sbjct: 82 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVDKTIINADKDGDGRISFE 137
Query: 1474 DF 1475
+F
Sbjct: 138 EF 139
Score = 64.3 bits (155), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 63/103 (61%), Gaps = 6/103 (5%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 23 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 81
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F + D D++G I GEL ++L+ +V +L D+Q+ +++D
Sbjct: 82 FRIYDMDKDGYISNGELFQVLKMMV----GNNLKDTQLQQIVD 120
Score = 59.3 bits (142), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
SLS EF S ++ + + R++ +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 23 SLSVEEFMSLPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 81
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLV 136
F + D D++G I GEL ++L+ +V
Sbjct: 82 FRIYDMDKDGYISNGELFQVLKMMV 106
Score = 31.6 bits (70), Expect = 4.3, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 80 DKDGDGRISFQEFLDTV 96
DKDGDGRISF+EF V
Sbjct: 127 DKDGDGRISFEEFCAVV 143
Score = 31.6 bits (70), Expect = 4.3, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1223 DKDGDGRISFQEFLDTV 1239
DKDGDGRISF+EF V
Sbjct: 127 DKDGDGRISFEEFCAVV 143
Score = 31.6 bits (70), Expect = 4.3, Method: Composition-based stats.
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 1382 DKDGDGRISFQEFLDTV 1398
DKDGDGRISF+EF V
Sbjct: 127 DKDGDGRISFEEFCAVV 143
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432
F +FN+ D++ DGRI F EF+ + + SRG ++KLR F + D D +G I + E+ +
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123
Query: 1433 MLRSLVEM-ARTTSLTDSQVT--ELIDGMF--QDAGLDSKDFLTYQDFK 1476
++ ++ +M T L + + T + +D +F D D K LT Q+F+
Sbjct: 124 IVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGK--LTLQEFQ 170
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F +FN+ D++ DGRI F EF+ + + SRG ++KLR F + D D +G I + E+ +
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123
Query: 1274 MLRSLVEMARTT 1285
++ ++ +M T
Sbjct: 124 IVDAIYQMVGNT 135
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 43/69 (62%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
F +FN+ D++ DGRI F EF+ + + SRG ++KLR F + D D +G I + E+ +
Sbjct: 64 FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLD 123
Query: 131 MLRSLVEMA 139
++ ++ +M
Sbjct: 124 IVDAIYQMV 132
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+V MF D +GD I F E++ + L RG E KL+ F + D DRNG ID+ EL +
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307
++ S+ ++ + S+ +V G +P E++
Sbjct: 120 IVESIYKLKKACSV---EVEAEQQGKLLTPEEVV 150
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432
+V MF D +GD I F E++ + L RG E KL+ F + D DRNG ID+ EL +
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 1433 MLRSLVEMARTTSL 1446
++ S+ ++ + S+
Sbjct: 120 IVESIYKLKKACSV 133
Score = 54.3 bits (129), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
+V MF D +GD I F E++ + L RG E KL+ F + D DRNG ID+ EL +
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLD 119
Query: 131 MLRSLVEMART 141
++ S+ ++ +
Sbjct: 120 IVESIYKLKKA 130
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta At
2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta At
2.4 Angstroms
Length = 193
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F +F D +GDG I F+EF+ + + SRG E KL+ F M D D NG I K E+ E
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 1274 MLRSLVEMARTT 1285
+++++ +M +
Sbjct: 124 IVQAIYKMVSSV 135
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432
F +F D +GDG I F+EF+ + + SRG E KL+ F M D D NG I K E+ E
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 1433 MLRSLVEMARTT 1444
+++++ +M +
Sbjct: 124 IVQAIYKMVSSV 135
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
F +F D +GDG I F+EF+ + + SRG E KL+ F M D D NG I K E+ E
Sbjct: 64 FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLE 123
Query: 131 MLRSLVEMART 141
+++++ +M +
Sbjct: 124 IVQAIYKMVSS 134
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDN 1419
+LG ++ M N VD DGDG I F EFL ++ +R +E+++R F + D
Sbjct: 330 SLGQNPTEAELQDMINEVDADGDGTIDFPEFL---IMMARKMKDTDSEEEIREAFRVFDK 386
Query: 1420 DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 387 DGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 437
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 12/96 (12%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDN 1260
+LG ++ M N VD DGDG I F EFL ++ +R +E+++R F + D
Sbjct: 330 SLGQNPTEAELQDMINEVDADGDGTIDFPEFL---IMMARKMKDTDSEEEIREAFRVFDK 386
Query: 1261 DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
D NG I EL ++ +L E LTD +V E+I
Sbjct: 387 DGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI 417
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 7/80 (8%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDN 117
+LG ++ M N VD DGDG I F EFL ++ +R +E+++R F + D
Sbjct: 330 SLGQNPTEAELQDMINEVDADGDGTIDFPEFL---IMMARKMKDTDSEEEIREAFRVFDK 386
Query: 118 DRNGVIDKGELAEMLRSLVE 137
D NG I EL ++ +L E
Sbjct: 387 DGNGYISAAELRHVMTNLGE 406
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E L
Sbjct: 308 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF------L 361
Query: 1279 VEMARTTSLTDSQ 1291
+ MAR TDS+
Sbjct: 362 IMMARKMKDTDSE 374
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E L
Sbjct: 308 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF------L 361
Query: 1438 VEMARTTSLTDSQ 1450
+ MAR TDS+
Sbjct: 362 IMMARKMKDTDSE 374
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E L
Sbjct: 308 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEF------L 361
Query: 136 VEMAR 140
+ MAR
Sbjct: 362 IMMAR 366
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 1196 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1251
L+ EF G+K S +V MF D + DG I F E++ + L +G + KL
Sbjct: 31 QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL 90
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT-SLTDSQVTELI 1296
R F + D D NG ID+GEL +++++ + R ++T + T ++
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMV 136
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 1355 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
L+ EF G+K S +V MF D + DG I F E++ + L +G + KL
Sbjct: 31 QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL 90
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT-SLTDSQVTELI 1455
R F + D D NG ID+GEL +++++ + R ++T + T ++
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMV 136
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 53 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 108
L+ EF G+K S +V MF D + DG I F E++ + L +G + KL
Sbjct: 31 QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL 90
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTS 142
R F + D D NG ID+GEL +++++ + R +
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCN 124
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 285 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 337
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DGDG I F EFL + +E+++R F +
Sbjct: 338 ------SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 391
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 392 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 442
Query: 1477 LMM 1479
MM
Sbjct: 443 QMM 445
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 397
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 398 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 425
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 397
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 398 GYISAAELRHVMTNLGE 414
Score = 37.7 bits (86), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 371
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 372 --MARKMKDTDSE 382
Score = 35.0 bits (79), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 338
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DGDG I F EFL + +E+++R F +
Sbjct: 339 ------SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRV 392
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 443
Query: 1477 LMM 1479
MM
Sbjct: 444 QMM 446
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 399 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 426
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 399 GYISAAELRHVMTNLGE 415
Score = 38.5 bits (88), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 372
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 373 --MARKMKYTDSE 383
Score = 35.0 bits (79), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 373
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 54.7 bits (130), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 85/183 (46%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 338
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + + + +E+++R F +
Sbjct: 339 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRV 392
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 443
Query: 1477 LMM 1479
MM
Sbjct: 444 QMM 446
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 19/144 (13%)
Query: 1154 TRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1213
TR++ ++ F+EA++L K G+ E G VMR +LG
Sbjct: 301 TRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR----------SLGQNPTEA 347
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELA 1272
++ M N VD DG+G I F EFL + + + +E+++R F + D D NG I EL
Sbjct: 348 ELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Query: 1273 EMLRSLVEMARTTSLTDSQVTELI 1296
++ +L E LTD +V E+I
Sbjct: 408 HVMTNLGE-----KLTDEEVDEMI 426
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + + + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGN 398
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 399 GYISAAELRHVMTNLGE 415
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 54.7 bits (130), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 398 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 445
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 398 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 425
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 398 GYISAAELRHVMTNLGE 414
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 371
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 372 --MARKMKYTDSE 382
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 371
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 372 --MARKMKYTDSE 382
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 398 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 445
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 398 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 425
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 338 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 397
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 398 GYISAAELRHVMTNLGE 414
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 371
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 372 --MARKMKYTDSE 382
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 371
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 372 --MARKMKYTDSE 382
Score = 35.0 bits (79), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 316 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 372
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 53.9 bits (128), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 252 FKEDGNILGHKLEYNSRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 304
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 305 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 358
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 359 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 409
Query: 1477 LMM 1479
MM
Sbjct: 410 QMM 412
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 1151 KAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM 1208
K E R Q E F+EA++L K G+ E G VMR +LG
Sbjct: 262 KLEYNSRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR----------SLGQ 308
Query: 1209 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVID 1267
++ M N VD DG+G I F EFL + +E+++R F + D D NG I
Sbjct: 309 NPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYIS 368
Query: 1268 KGELAEMLRSLVEMARTTSLTDSQVTELI 1296
EL ++ +L E LTD +V E+I
Sbjct: 369 AAELRHVMTNLGE-----KLTDEEVDEMI 392
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 305 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 364
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 365 GYISAAELRHVMTNLGE 381
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 283 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 249 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 301
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 302 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 355
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 356 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 406
Query: 1477 LMM 1479
MM
Sbjct: 407 QMM 409
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 1154 TRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1213
TR++ ++ F+EA++L K G+ E G VMR +LG
Sbjct: 264 TRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR----------SLGQNPTEA 310
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
++ M N VD DG+G I F EFL + +E+++R F + D D NG I EL
Sbjct: 311 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 370
Query: 1273 EMLRSLVEMARTTSLTDSQVTELI 1296
++ +L E LTD +V E+I
Sbjct: 371 HVMTNLGE-----KLTDEEVDEMI 389
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 302 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 361
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 362 GYISAAELRHVMTNLGE 378
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 280 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 336
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 252 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 304
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 305 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 358
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 359 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 409
Query: 1477 LMM 1479
MM
Sbjct: 410 QMM 412
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 1154 TRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1213
TR++ ++ F+EA++L K G+ E G VMR +LG
Sbjct: 267 TRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR----------SLGQNPTEA 313
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
++ M N VD DG+G I F EFL + +E+++R F + D D NG I EL
Sbjct: 314 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 373
Query: 1273 EMLRSLVEMARTTSLTDSQVTELI 1296
++ +L E LTD +V E+I
Sbjct: 374 HVMTNLGE-----KLTDEEVDEMI 392
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 305 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 364
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 365 GYISAAELRHVMTNLGE 381
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 283 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 339
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 287 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 339
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 340 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 393
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 394 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 444
Query: 1477 LMM 1479
MM
Sbjct: 445 QMM 447
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 1154 TRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1213
TR++ ++ F+EA++L K G+ E G VMR +LG
Sbjct: 302 TRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR----------SLGQNPTEA 348
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
++ M N VD DG+G I F EFL + +E+++R F + D D NG I EL
Sbjct: 349 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 408
Query: 1273 EMLRSLVEMARTTSLTDSQVTELI 1296
++ +L E LTD +V E+I
Sbjct: 409 HVMTNLGE-----KLTDEEVDEMI 427
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 340 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 399
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 400 GYISAAELRHVMTNLGE 416
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 318 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 374
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 338
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 339 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 392
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 443
Query: 1477 LMM 1479
MM
Sbjct: 444 QMM 446
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 399 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 426
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 399 GYISAAELRHVMTNLGE 415
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 372
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 373 --MARKMKDTDSE 383
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 338
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 339 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRV 392
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 443
Query: 1477 LMM 1479
MM
Sbjct: 444 QMM 446
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 399 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 426
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGN 398
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 399 GYISAAELRHVMTNLGE 415
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 372
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 373 --MARKMKYTDSE 383
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 1300 FQSPRELMLAKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F+ ++ K E R Q E F+EA++L K G+ E G VMR
Sbjct: 286 FKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFD--KDGDGTITTKELG-TVMR---- 338
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM 1416
+LG ++ M N VD DG+G I F EFL + +E+++R F +
Sbjct: 339 ------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRV 392
Query: 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
D D NG I EL ++ +L E LTD +V E+I ++A +D + Y++F
Sbjct: 393 FDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFV 443
Query: 1477 LMM 1479
MM
Sbjct: 444 QMM 446
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 399 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 426
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 339 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 398
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 399 GYISAAELRHVMTNLGE 415
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 372
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 373 --MARKMKDTDSE 383
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 317 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 373
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central
Helix
Length = 146
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1423
+LG ++ M N VD DG+G I F EFL T++ +E+++R F + D D NG
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFL-TMMARKMKDSEEEIREAFRVFDKDGNG 96
Query: 1424 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 97 FISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVTMM 143
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1264
+LG ++ M N VD DG+G I F EFL T++ +E+++R F + D D NG
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFL-TMMARKMKDSEEEIREAFRVFDKDGNG 96
Query: 1265 VIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
I EL ++ +L E LTD +V E+I
Sbjct: 97 FISAAELRHVMTNLGE-----KLTDEEVDEMI 123
Score = 40.8 bits (94), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 121
+LG ++ M N VD DG+G I F EFL T++ +E+++R F + D D NG
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFL-TMMARKMKDSEEEIREAFRVFDKDGNG 96
Query: 122 VIDKGELAEMLRSLVE 137
I EL ++ +L E
Sbjct: 97 FISAAELRHVMTNLGE 112
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 52.0 bits (123), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 1360 EFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFD 1415
EF + LG++ + ++N D + DG + F EF+ V L + E KL+ F
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 1416 MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF 1475
+ D D NG IDK EL +M ++ + +L+ E I+ +F +++ LT ++F
Sbjct: 101 LYDADGNGSIDKNELLDMFMAVQALNGQQTLSPE---EFINLVFHKIDINNDGELTLEEF 157
Score = 49.3 bits (116), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 1201 EFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFD 1256
EF + LG++ + ++N D + DG + F EF+ V L + E KL+ F
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 1257 MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
+ D D NG IDK EL +M ++ + +L+ + L+
Sbjct: 101 LYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLV 140
Score = 47.4 bits (111), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 58 EFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFD 113
EF + LG++ + ++N D + DG + F EF+ V L + E KL+ F
Sbjct: 41 EFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFK 100
Query: 114 MCDNDRNGVIDKGELAEMLRSL 135
+ D D NG IDK EL +M ++
Sbjct: 101 LYDADGNGSIDKNELLDMFMAV 122
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 145
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DGDG I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GYISAAELRHVMTNLGE 114
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 35.4 bits (80), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTID 64
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1423
+LG ++ M N VD DG+G I F EFL + + +++R F + D D NG
Sbjct: 34 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNG 93
Query: 1424 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 94 YISAAELRHVMTNLGE-----KLTDEEVDEMI----REANIDGDGQVNYEEFVQMM 140
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1264
+LG ++ M N VD DG+G I F EFL + + +++R F + D D NG
Sbjct: 34 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNG 93
Query: 1265 VIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
I EL ++ +L E LTD +V E+I
Sbjct: 94 YISAAELRHVMTNLGE-----KLTDEEVDEMI 120
Score = 39.3 bits (90), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 121
+LG ++ M N VD DG+G I F EFL + + +++R F + D D NG
Sbjct: 34 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEIREAFRVFDKDGNG 93
Query: 122 VIDKGELAEMLRSLVE 137
I EL ++ +L E
Sbjct: 94 YISAAELRHVMTNLGE 109
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ +FN D DG+G I F++F+ + + RG +KL+ F++ D +++G I K E+
Sbjct: 128 TTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187
Query: 129 AEMLRSLVE-MARTSFP 144
+++S+ + M R ++P
Sbjct: 188 LAIMKSIYDMMGRHTYP 204
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ +FN D DG+G I F++F+ + + RG +KL+ F++ D +++G I K E+
Sbjct: 128 TTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187
Query: 1272 AEMLRSLVEM 1281
+++S+ +M
Sbjct: 188 LAIMKSIYDM 197
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ +FN D DG+G I F++F+ + + RG +KL+ F++ D +++G I K E+
Sbjct: 128 TTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEM 187
Query: 1431 AEMLRSLVEM 1440
+++S+ +M
Sbjct: 188 LAIMKSIYDM 197
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 51.2 bits (121), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
M + VD DG+G I F EFL + + E++L+ F + D D+NG I EL ++
Sbjct: 51 MISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMI 110
Query: 1436 SLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+L E LTD +V ++I ++A LD + Y++F MM
Sbjct: 111 NLGE-----KLTDEEVEQMI----KEADLDGDGQVNYEEFVKMM 145
Score = 43.5 bits (101), Expect = 0.001, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
M + VD DG+G I F EFL + + E++L+ F + D D+NG I EL ++
Sbjct: 51 MISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMI 110
Query: 1277 SLVEMARTTSLTDSQVTELI 1296
+L E LTD +V ++I
Sbjct: 111 NLGE-----KLTDEEVEQMI 125
Score = 38.9 bits (89), Expect = 0.029, Method: Composition-based stats.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E +
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL---- 71
Query: 1438 VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
MA+ TD++ E + F+ D +++ + + +M
Sbjct: 72 --MAKKVKDTDAE--EELKEAFKVFDKDQNGYISASELRHVM 109
Score = 38.9 bits (89), Expect = 0.030, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
M + VD DG+G I F EFL + + E++L+ F + D D+NG I EL ++
Sbjct: 51 MISEVDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMI 110
Query: 134 SLVE 137
+L E
Sbjct: 111 NLGE 114
Score = 38.5 bits (88), Expect = 0.041, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E +
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSL---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MA+ TD++
Sbjct: 72 --MAKKVKDTDAE 82
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 136 VE 137
V+
Sbjct: 76 VK 77
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 1325 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1384
F+EA+AL F K G+ E G VMR+ LG ++ M N VD D
Sbjct: 12 FKEAFAL-FD-KDGDGTITTKELG-TVMRS----------LGQNPTEAELQDMINEVDAD 58
Query: 1385 GDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443
G+G I F EFL + +E++L F + D D NG+I EL ++ +L E
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE---- 114
Query: 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
LTD +V E+I ++A +D + Y++F MM
Sbjct: 115 -KLTDDEVDEMI----READIDGDGHINYEEFVRMM 145
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1225
F+EA+AL F K G+ E G VMR+ LG ++ M N VD D
Sbjct: 12 FKEAFAL-FD-KDGDGTITTKELG-TVMRS----------LGQNPTEAELQDMINEVDAD 58
Query: 1226 GDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284
G+G I F EFL + +E++L F + D D NG+I EL ++ +L E
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE---- 114
Query: 1285 TSLTDSQVTELI 1296
LTD +V E+I
Sbjct: 115 -KLTDDEVDEMI 125
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 23 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 82
F+EA+AL F K G+ E G VMR+ LG ++ M N VD D
Sbjct: 12 FKEAFAL-FD-KDGDGTITTKELG-TVMRS----------LGQNPTEAELQDMINEVDAD 58
Query: 83 GDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
G+G I F EFL + +E++L F + D D NG+I EL ++ +L E
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F + DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL---- 71
Query: 1279 VEMARTTSLTDSQVTELIDG--MFQSPRELMLAKAETR 1314
MAR DS+ ELI+ +F +++ AE R
Sbjct: 72 --MARKMKEQDSE-EELIEAFKVFDRDGNGLISAAELR 106
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 50.8 bits (120), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 1325 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1384
F+EA+AL F K G+ E G VMR+ LG ++ M N VD D
Sbjct: 12 FKEAFAL-FD-KDGDGTITTKELG-TVMRS----------LGQNPTEAELQDMINEVDAD 58
Query: 1385 GDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443
G+G I F EFL + +E++L F + D D NG+I EL ++ +L E
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE---- 114
Query: 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
LTD +V E+I ++A +D + Y++F MM
Sbjct: 115 -KLTDDEVDEMI----READIDGDGHINYEEFVRMM 145
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1225
F+EA+AL F K G+ E G VMR+ LG ++ M N VD D
Sbjct: 12 FKEAFAL-FD-KDGDGTITTKELG-TVMRS----------LGQNPTEAELQDMINEVDAD 58
Query: 1226 GDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284
G+G I F EFL + +E++L F + D D NG+I EL ++ +L E
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE---- 114
Query: 1285 TSLTDSQVTELI 1296
LTD +V E+I
Sbjct: 115 -KLTDDEVDEMI 125
Score = 38.5 bits (88), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 23 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 82
F+EA+AL F K G+ E G VMR+ LG ++ M N VD D
Sbjct: 12 FKEAFAL-FD-KDGDGTITTKELG-TVMRS----------LGQNPTEAELQDMINEVDAD 58
Query: 83 GDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
G+G I F EFL + +E++L F + D D NG+I EL ++ +L E
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE 114
Score = 34.7 bits (78), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F + DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 16 FALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSL---- 71
Query: 1279 VEMARTTSLTDSQVTELIDG--MFQSPRELMLAKAETR 1314
MAR DS+ ELI+ +F +++ AE R
Sbjct: 72 --MARKMKEQDSE-EELIEAFKVFDRDGNGLISAAELR 106
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms Resolution
Length = 148
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----REANIDGDGQVNYEEFVQMM 145
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GYISAAELRHVMTNLGE 114
Score = 37.4 bits (85), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 37.4 bits (85), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.7 bits (78), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 11/118 (9%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D+N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F K+MM
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READVDGDGQINYEEFVKVMM 147
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D+N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D+N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GFISAAELRHVMTNLGE 115
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 96 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 143
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 96 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 123
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 96 GYISAAELRHVMTNLGE 112
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 69
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 70 --MARKMKDTDSE 80
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 69
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 70 --MARKMKDTDSE 80
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 96 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 143
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 96 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 123
Score = 38.5 bits (88), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 96 GYISAAELRHVMTNLGE 112
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 69
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 70 --MARKMKDTDSE 80
Score = 37.4 bits (85), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 69
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 70 --MARKMKDTDSE 80
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 34 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 93
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 94 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 141
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 34 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 93
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 94 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 121
Score = 38.1 bits (87), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 34 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 93
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 94 GYISAAELRHVMTNLGE 110
Score = 37.4 bits (85), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 67
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 68 --MARKMKDTDSE 78
Score = 37.4 bits (85), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 67
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 68 --MARKMKDTDSE 78
Score = 34.7 bits (78), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 12 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 68
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin
Light Chain Kinase From Combination Of Nmr And Aqueous
And Contrast-matched Saxs Data
Length = 148
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVTMM 145
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 38.1 bits (87), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GFISAAELRHVMTNLGE 114
Score = 37.0 bits (84), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 37.0 bits (84), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.7 bits (78), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition
On The Basis Of X-Ray Structures
Length = 144
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 35 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 94
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 95 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 142
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 35 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 94
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 95 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 122
Score = 38.5 bits (88), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 35 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 94
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 95 GYISAAELRHVMTNLGE 111
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 68
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 69 --MARKMKDTDSE 79
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 68
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 69 --MARKMKDTDSE 79
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 69
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By
Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By
Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVTMM 145
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 38.1 bits (87), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GFISAAELRHVMTNLGE 114
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 37.0 bits (84), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.7 bits (78), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 146
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GYISAAELRHVMTNLGE 115
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 96 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 143
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 96 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 123
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 36 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 95
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 96 GYISAAELRHVMTNLGE 112
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 69
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 70 --MARKMKDTDSE 80
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 69
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 70 --MARKMKDTDSE 80
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 14 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX
Length = 152
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 42 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 101
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 102 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 149
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 42 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 101
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 102 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 129
Score = 38.5 bits (88), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 42 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 101
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 102 GYISAAELRHVMTNLGE 118
Score = 37.4 bits (85), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 20 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 75
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 76 --MARKMKDTDSE 86
Score = 37.4 bits (85), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 20 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 75
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 76 --MARKMKDTDSE 86
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 20 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 68
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 44 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 103
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 104 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 151
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 44 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 103
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 104 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 131
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 44 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 103
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 104 GYISAAELRHVMTNLGE 120
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 22 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 77
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 78 --MARKMKDTDSE 88
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 22 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 77
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 78 --MARKMKDTDSE 88
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 22 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 78
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 11/114 (9%)
Query: 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDND 1420
LG ++ M + VD+DG G + F EFL +V S+G TE++L +F M D +
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKN 107
Query: 1421 RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-DG-MFQDAGLDSKDFLTY 1472
+G ID EL ML++ E ++T+ + EL+ DG D +D +FL +
Sbjct: 108 ADGYIDLEELKIMLQATGE-----TITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Score = 47.0 bits (110), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 10/98 (10%)
Query: 1206 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDND 1261
LG ++ M + VD+DG G + F EFL +V S+G TE++L +F M D +
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKN 107
Query: 1262 RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-DG 1298
+G ID EL ML++ E ++T+ + EL+ DG
Sbjct: 108 ADGYIDLEELKIMLQATGE-----TITEDDIEELMKDG 140
Score = 45.1 bits (105), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 63 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDND 118
LG ++ M + VD+DG G + F EFL +V S+G TE++L +F M D +
Sbjct: 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKN 107
Query: 119 RNGVIDKGELAEMLRSLVE 137
+G ID EL ML++ E
Sbjct: 108 ADGYIDLEELKIMLQATGE 126
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin And 3'
Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin And 3'
Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin And 3'
Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin, 3',5'
Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin, 3',5'
Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin, 3',5'
Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A Ryanodine
Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1) Iq
Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1) Iq
Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3) Iq
Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2 C-Terminal
Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2 C-Terminal
Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2 C-Terminal
Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2 C-Terminal
Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin Interaction:
A Novel 1-26 Calmodulin Binding Motif With A Bipartite
Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First Endogenous
Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With The
Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam Binding
Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 145
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GYISAAELRHVMTNLGE 114
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 37.4 bits (85), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 145
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GYISAAELRHVMTNLGE 114
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVTMM 146
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GFISAAELRHVMTNLGE 115
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GYISAAELRHVMTNLGE-----XLTDEEVDEMI----READIDGDGQVNYEEFVQMM 146
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GYISAAELRHVMTNLGE-----XLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GYISAAELRHVMTNLGE 115
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 98 GYISAAELRHVMTNLGE-----XLTDEEVDEMI----READIDGDGQVNYEEFVQMM 145
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GYISAAELRHVMTNLGE-----XLTDEEVDEMI 125
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GYISAAELRHVMTNLGE 114
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 37.4 bits (85), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.7 bits (78), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ F +FN+ D D +G I F+EF+ + + SRG DKL F + D D NG+I E+
Sbjct: 62 SAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 129 AEMLRSLVEMA 139
++ ++ +M
Sbjct: 122 LRIVDAIYKMV 132
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ F +FN+ D D +G I F+EF+ + + SRG DKL F + D D NG+I E+
Sbjct: 62 SAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 1272 AEMLRSLVEMA 1282
++ ++ +M
Sbjct: 122 LRIVDAIYKMV 132
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ F +FN+ D D +G I F+EF+ + + SRG DKL F + D D NG+I E+
Sbjct: 62 SAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEM 121
Query: 1431 AEMLRSLVEMA 1441
++ ++ +M
Sbjct: 122 LRIVDAIYKMV 132
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVTMM 146
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GFISAAELRHVMTNLGE 115
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 146
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GYISAAELRHVMTNLGE 115
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.4 bits (85), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 40 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 99
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 100 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 147
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 40 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 99
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 100 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 127
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 40 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 99
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 100 GYISAAELRHVMTNLGE 116
Score = 37.4 bits (85), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 18 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 73
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 74 --MARKMKDTDSE 84
Score = 37.4 bits (85), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 18 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 73
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 74 --MARKMKDTDSE 84
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 18 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 74
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin And 2'
Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin And 2'
Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax
Edema Factor (Ef) In Complex With Calmodulin And 2'
Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between Calmodulin
And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between Calmodulin
And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between Calmodulin
And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between Calmodulin
And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A Dap
Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated Sodium
Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A Trpv1
C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 146
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GYISAAELRHVMTNLGE 115
Score = 37.4 bits (85), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.4 bits (85), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human Drp-1
Kinase
Length = 150
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 146
Score = 43.9 bits (102), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GYISAAELRHVMTNLGE 115
Score = 37.4 bits (85), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.4 bits (85), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V
Length = 145
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 37 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 96
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F MM
Sbjct: 97 GYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDGDGQVNYEEFVQMM 144
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 37 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 96
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 97 GYISAAELRHVMTNLGE-----KLTDEEVDEMI 124
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 37 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 96
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 97 GYISAAELRHVMTNLGE 113
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 15 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 70
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 71 --MARKMKDTDSE 81
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 15 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 70
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 71 --MARKMKDTDSE 81
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 15 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 71
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D+N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y +F K+MM
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READVDGDGQINYDEFVKVMM 147
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D+N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 39.7 bits (91), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D+N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GFISAAELRHVMTNLGE 115
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 65
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL+ + +E+KL+ F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F ++MM
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READVDGDGQVNYEEFVQVMM 146
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL+ + +E+KL+ F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL+ + +E+KL+ F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GFISAAELRHVMTNLGE 114
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V D M ++A +D + Y++F MM
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEV----DQMIREADIDGDGQVNYEEFVQMM 146
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V ++I
Sbjct: 99 GYISAAELRHVMTNLGE-----KLTDEEVDQMI 126
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GYISAAELRHVMTNLGE 115
Score = 37.4 bits (85), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.4 bits (85), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.7 bits (78), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State (
Crystal Form 2)
Length = 149
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I EL ++ +L E LTD +V E+I +++ +D + Y++F MM
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----RESDIDGDGQVNYEEFVTMM 146
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 99 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 126
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 99 GFISAAELRHVMTNLGE 115
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 72
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 73 --MARKMKDTDSE 83
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ +FN D D +G +SF++F+ + + RG ++KL F++ D +++G I K E+
Sbjct: 101 TTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEM 160
Query: 129 AEMLRSLVE-MARTSFP 144
++++++ + M + ++P
Sbjct: 161 LDIMKAIYDMMGKCTYP 177
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ +FN D D +G +SF++F+ + + RG ++KL F++ D +++G I K E+
Sbjct: 101 TTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEM 160
Query: 1272 AEMLRSLVEM 1281
++++++ +M
Sbjct: 161 LDIMKAIYDM 170
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 43/70 (61%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ +FN D D +G +SF++F+ + + RG ++KL F++ D +++G I K E+
Sbjct: 101 TTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEM 160
Query: 1431 AEMLRSLVEM 1440
++++++ +M
Sbjct: 161 LDIMKAIYDM 170
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D N
Sbjct: 35 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 94
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F ++MM
Sbjct: 95 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READVDGDGQVNYEEFVQVMM 143
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D N
Sbjct: 35 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 94
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 95 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 122
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D N
Sbjct: 35 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 94
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 95 GFISAAELRHVMTNLGE 111
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 68
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 69 --MARKMKDTDSE 79
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 68
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 69 --MARKMKDTDSE 79
Score = 34.3 bits (77), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 13 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 11/118 (9%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMM 1479
G I EL ++ +L E LTD +V E+I ++A +D + Y++F ++MM
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI----READVDGDGQVNYEEFVQVMM 146
Score = 44.3 bits (103), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL ++ +L E LTD +V E+I
Sbjct: 98 GFISAAELRHVMTNLGE-----KLTDEEVDEMI 125
Score = 38.5 bits (88), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N VD DG+G I F EFL+ + +E++L+ F + D D N
Sbjct: 38 SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL ++ +L E
Sbjct: 98 GFISAAELRHVMTNLGE 114
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E +
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNL---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 34.3 bits (77), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 64
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 10/117 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG ++ M N V DG+G I F +FL + +E+++R F + D N
Sbjct: 339 SLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGN 398
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
G I +L ++ +L E LTD +V E+I ++AG+D + Y+ F MM
Sbjct: 399 GYISAAQLRHVMTNLGE-----KLTDEEVDEMI----REAGIDGDGQVNYEQFVQMM 446
Score = 38.9 bits (89), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG ++ M N V DG+G I F +FL + +E+++R F + D N
Sbjct: 339 SLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGN 398
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I +L ++ +L E LTD +V E+I
Sbjct: 399 GYISAAQLRHVMTNLGE-----KLTDEEVDEMI 426
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ ++ + + TE +L+ + + D NG ID + M
Sbjct: 317 FSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLTM---- 372
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 373 --MARKMKDTDSE 383
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG ++ M N V DG+G I F +FL + +E+++R F + D N
Sbjct: 339 SLGQNPTEAELQDMINEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGN 398
Query: 121 GVIDKGELAEMLRSLVE 137
G I +L ++ +L E
Sbjct: 399 GYISAAQLRHVMTNLGE 415
Score = 32.0 bits (71), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ ++ + + TE +L+ + + D NG ID
Sbjct: 317 FSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTID 365
>pdb|1DDX|A Chain A, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|B Chain B, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|C Chain C, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|1DDX|D Chain D, Crystal Structure Of A Mixture Of Arachidonic Acid And
Prostaglandin Bound To The Cyclooxygenase Active Site Of
Cox-2: Prostaglandin Structure
pdb|3NTG|A Chain A, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|B Chain B, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|C Chain C, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
pdb|3NTG|D Chain D, Crystal Structure Of Cox-2 With Selective Compound 23d-(R)
Length = 552
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 197 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 253
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 254 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 309
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 310 IKIVIEDYVQHLSG 323
>pdb|3RR3|A Chain A, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|B Chain B, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|C Chain C, Structure Of (R)-Flurbiprofen Bound To Mcox-2
pdb|3RR3|D Chain D, Structure Of (R)-Flurbiprofen Bound To Mcox-2
Length = 560
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 197 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 253
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 254 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 309
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 310 IKIVIEDYVQHLSG 323
>pdb|3KRK|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of L531f Murine Cox-2
pdb|3KRK|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of L531f Murine Cox-2
Length = 591
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 201 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 257
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 258 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 313
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 314 IKIVIEDYVQHLSG 327
>pdb|3HS5|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS5|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS6|A Chain A, X-Ray Crystal Structure Of Eicosapentaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS6|B Chain B, X-Ray Crystal Structure Of Eicosapentaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS7|A Chain A, X-Ray Crystal Structure Of Docosahexaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3HS7|B Chain B, X-Ray Crystal Structure Of Docosahexaenoic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 591
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 201 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 257
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 258 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 313
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 314 IKIVIEDYVQHLSG 327
>pdb|3MDL|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3MDL|B Chain B, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 587
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 202 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 258
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 259 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 314
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 315 IKIVIEDYVQHLSG 328
>pdb|3OLT|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLT|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLU|A Chain A, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of R513h Murine Cox-2
pdb|3OLU|B Chain B, X-Ray Crystal Structure Of 1-Arachidonoyl Glycerol Bound
To The Cyclooxygenase Channel Of R513h Murine Cox-2
Length = 592
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 202 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 258
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 259 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 314
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 315 IKIVIEDYVQHLSG 328
>pdb|3NT1|A Chain A, High Resolution Structure Of Naproxen:cox-2 Complex.
pdb|3NT1|B Chain B, High Resolution Structure Of Naproxen:cox-2 Complex.
pdb|3NTB|A Chain A, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|B Chain B, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|C Chain C, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3NTB|D Chain D, Structure Of 6-Methylthio Naproxen Analog Bound To Mcox-2.
pdb|3LN0|A Chain A, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|B Chain B, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|C Chain C, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN0|D Chain D, Structure Of Compound 5c-S Bound At The Active Site Of
Cox-2
pdb|3LN1|A Chain A, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|B Chain B, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|C Chain C, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3LN1|D Chain D, Structure Of Celecoxib Bound At The Cox-2 Active Site
pdb|3MQE|A Chain A, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|B Chain B, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|C Chain C, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3MQE|D Chain D, Structure Of Sc-75416 Bound At The Cox-2 Active Site
pdb|3Q7D|A Chain A, Structure Of (R)-Naproxen Bound To Mcox-2.
pdb|3Q7D|B Chain B, Structure Of (R)-Naproxen Bound To Mcox-2
Length = 587
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 197 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 253
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 254 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 309
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 310 IKIVIEDYVQHLSG 323
>pdb|3QH0|A Chain A, X-Ray Crystal Structure Of Palmitic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QH0|B Chain B, X-Ray Crystal Structure Of Palmitic Acid Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QMO|A Chain A, X-Ray Crystal Structure Of Ns-398 Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|3QMO|B Chain B, X-Ray Crystal Structure Of Ns-398 Bound To The
Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|4E1G|A Chain A, X-Ray Crystal Structure Of Alpha-Linolenic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
pdb|4E1G|B Chain B, X-Ray Crystal Structure Of Alpha-Linolenic Acid Bound To
The Cyclooxygenase Channel Of Cyclooxygenase-2
Length = 610
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 220 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 276
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 277 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 332
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 333 IKIVIEDYVQHLSG 346
>pdb|3TZI|A Chain A, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of G533v Murine Cox-2
pdb|3TZI|B Chain B, X-Ray Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Channel Of G533v Murine Cox-2
Length = 593
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 203 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 259
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 260 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 315
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 316 IKIVIEDYVQHLSG 329
>pdb|1PXX|A Chain A, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|B Chain B, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|C Chain C, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1PXX|D Chain D, Crystal Structure Of Diclofenac Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|4FM5|A Chain A, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|B Chain B, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|C Chain C, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
pdb|4FM5|D Chain D, X-Ray Structure Of Des-Methylflurbiprofen Bound To Murine
Cox-2
Length = 604
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 214 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 270
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R HN + ++ +HPE DE++FQ +R +++
Sbjct: 271 ----FAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEHPEWGDEQLFQTSRLILIGET 326
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 327 IKIVIEDYVQHLSG 340
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 55 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 114
Query: 129 AEMLRSLVE-MARTSFP 144
++++++ + M + ++P
Sbjct: 115 MDIVKAIYDMMGKYTYP 131
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 55 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 114
Query: 1272 AEMLRSLVEM 1281
++++++ +M
Sbjct: 115 MDIVKAIYDM 124
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 55 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 114
Query: 1431 AEMLRSLVEM 1440
++++++ +M
Sbjct: 115 MDIVKAIYDM 124
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 52 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 111
Query: 129 AEMLRSLVE-MARTSFP 144
++++++ + M + ++P
Sbjct: 112 MDIVKAIYDMMGKYTYP 128
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 52 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 111
Query: 1272 AEMLRSLVEM 1281
++++++ +M
Sbjct: 112 MDIVKAIYDM 121
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 52 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 111
Query: 1431 AEMLRSLVEM 1440
++++++ +M
Sbjct: 112 MDIVKAIYDM 121
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 1422
+LG ++ N VD DG+G I+F EFL + +E+++R F + D D N
Sbjct: 38 SLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF 1475
G I EL + +L E LTD +V E I ++A +D + Y++F
Sbjct: 98 GYISAAELRHVXTNLGE-----KLTDEEVDEXI----READIDGDGQVNYEEF 141
Score = 42.4 bits (98), Expect = 0.003, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 1263
+LG ++ N VD DG+G I+F EFL + +E+++R F + D D N
Sbjct: 38 SLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL + +L E LTD +V E I
Sbjct: 98 GYISAAELRHVXTNLGE-----KLTDEEVDEXI 125
Score = 37.7 bits (86), Expect = 0.060, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 120
+LG ++ N VD DG+G I+F EFL + +E+++R F + D D N
Sbjct: 38 SLGCNPTEAELQDXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL + +L E
Sbjct: 98 GYISAAELRHVXTNLGE 114
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E TE +L+ + D D NG I+ E L
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF------L 69
Query: 1279 VEMARTTSLTDSQ 1291
AR TDS+
Sbjct: 70 TXXARCXKDTDSE 82
Score = 33.5 bits (75), Expect = 1.2, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E TE +L+ + D D NG I+ E L
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF------L 69
Query: 1438 VEMARTTSLTDSQ 1450
AR TDS+
Sbjct: 70 TXXARCXKDTDSE 82
Score = 30.8 bits (68), Expect = 8.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
F++ DKDGDG I+ +E TE +L+ + D D NG I+ E
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINFPEF 68
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 88 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 147
Query: 129 AEMLRSLVE-MARTSFP 144
++++++ + M + ++P
Sbjct: 148 MDIVKAIYDMMGKYTYP 164
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 88 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 147
Query: 1272 AEMLRSLVEM 1281
++++++ +M
Sbjct: 148 MDIVKAIYDM 157
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 88 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 147
Query: 1431 AEMLRSLVEM 1440
++++++ +M
Sbjct: 148 MDIVKAIYDM 157
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 46.2 bits (108), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 22/142 (15%)
Query: 1196 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 1248
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 27 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 83
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPREL-- 1306
+L F + D + +G+I EL +L S+ E LTD++V +++ + E+
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDDMLREVSDGSGEINI 138
Query: 1307 -----MLAKAETRERRQKKLEH 1323
+L+K + R+K L +
Sbjct: 139 QQFAALLSKGSSTGTRRKALRN 160
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 1355 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 1407
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 27 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 83
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1455
+L F + D + +G+I EL +L S+ E LTD++V +++
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDDML 126
Score = 40.8 bits (94), Expect = 0.009, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 53 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 105
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 27 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 83
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+L F + D + +G+I EL +L S+ E
Sbjct: 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 115
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 28/162 (17%)
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTEL-----IDGMFQSPRELMLA 1309
F + D D NG I ELA ++RSL S ++++V +L +DG Q LA
Sbjct: 17 FALFDKDNNGSISSSELATVMRSL-----GLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 71
Query: 1310 KAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369
+R+ + E EA+ + D+ G+ ++ + + S +
Sbjct: 72 LM-SRQLKSNDSEQELLEAFKVF------------DKNGDGLISAAELKHVLTSIGEKLT 118
Query: 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
DA M+ + DG G I+ Q+F L S+G + R
Sbjct: 119 DAEVDDMLREV--SDGSGEINIQQF---AALLSKGSSTGTRR 155
>pdb|3N8Y|B Chain B, Structure Of Aspirin Acetylated Cyclooxygenase-1 In
Complex With Diclofenac
Length = 553
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 197 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 252
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 253 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 312
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 313 VIEEYVQQLSGYFLQ 327
>pdb|1EBV|A Chain A, Ovine Pghs-1 Complexed With Salicyl Hydroxamic Acid
Length = 551
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 196 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 251
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 252 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 311
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 312 VIEEYVQQLSGYFLQ 326
>pdb|1DIY|A Chain A, Crystal Structure Of Arachidonic Acid Bound In The
Cyclooxygenase Active Site Of Pghs-1
pdb|1Q4G|A Chain A, 2.0 Angstrom Crystal Structure Of Ovine Prostaglandin H2
Synthase-1, In Complex With
Alpha-Methyl-4-Biphenylacetic Acid
pdb|1Q4G|B Chain B, 2.0 Angstrom Crystal Structure Of Ovine Prostaglandin H2
Synthase-1, In Complex With
Alpha-Methyl-4-Biphenylacetic Acid
pdb|2AYL|A Chain A, 2.0 Angstrom Crystal Structure Of Manganese Protoporphyrin
Ix- Reconstituted Ovine Prostaglandin H2 Synthase-1
Complexed With Flurbiprofen
pdb|2AYL|B Chain B, 2.0 Angstrom Crystal Structure Of Manganese Protoporphyrin
Ix- Reconstituted Ovine Prostaglandin H2 Synthase-1
Complexed With Flurbiprofen
pdb|3KK6|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Celecoxib
pdb|3KK6|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Celecoxib
pdb|3N8V|A Chain A, Crystal Structure Of Unoccupied Cyclooxygenase-1
pdb|3N8V|B Chain B, Crystal Structure Of Unoccupied Cyclooxygenase-1
pdb|3N8W|A Chain A, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1
Heterodimer Mutant In Complex With Flurbiprofen
pdb|3N8X|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Nimesulide
pdb|3N8X|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Nimesulide
pdb|3N8Y|A Chain A, Structure Of Aspirin Acetylated Cyclooxygenase-1 In
Complex With Diclofenac
pdb|3N8Z|A Chain A, Crystal Structure Of Cyclooxygenase-1 In Complex With
Flurbiprofen
pdb|3N8Z|B Chain B, Crystal Structure Of Cyclooxygenase-1 In Complex With
Flurbiprofen
Length = 553
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 197 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 252
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 253 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 312
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 313 VIEEYVQQLSGYFLQ 327
>pdb|1PTH|A Chain A, The Structural Basis Of Aspirin Activity Inferred From The
Crystal Structure Of Inactivated Prostaglandin H2
Synthase
pdb|1PTH|B Chain B, The Structural Basis Of Aspirin Activity Inferred From The
Crystal Structure Of Inactivated Prostaglandin H2
Synthase
Length = 576
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 204 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 259
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 260 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 319
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 320 VIEEYVQQLSGYFLQ 334
>pdb|3N8W|B Chain B, Crystal Structure Of R120qNATIVE CYCLOOXYGENASE-1
Heterodimer Mutant In Complex With Flurbiprofen
Length = 553
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 197 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 252
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 253 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 312
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 313 VIEEYVQQLSGYFLQ 327
>pdb|1HT5|A Chain A, The 2.75 Angstrom Resolution Model Of Ovine Cox-1
Complexed With Methyl Ester Flurbiprofen
pdb|1HT5|B Chain B, The 2.75 Angstrom Resolution Model Of Ovine Cox-1
Complexed With Methyl Ester Flurbiprofen
pdb|1HT8|A Chain A, The 2.7 Angstrom Resolution Model Of Ovine Cox-1 Complexed
With Alclofenac
pdb|1HT8|B Chain B, The 2.7 Angstrom Resolution Model Of Ovine Cox-1 Complexed
With Alclofenac
Length = 551
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 196 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 251
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 252 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 311
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 312 VIEEYVQQLSGYFLQ 326
>pdb|1PGE|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen)
pdb|1PGE|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
P-(2'-Iodo-5'-Thenoyl) Hydrotropic Acid (Iodosuprofen)
pdb|1PGF|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Cis Model
pdb|1PGF|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Cis Model
pdb|1PGG|A Chain A, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Trans Model
pdb|1PGG|B Chain B, Prostaglandin H2 Synthase-1 Complexed With
1-(4-Iodobenzoyl)-5- Methoxy-2-Methylindole-3-Acetic
Acid (Iodoindomethacin), Trans Model
pdb|1FE2|A Chain A, Crystal Structure Of Dihomo-Gamma-Linoleic Acid Bound In
The Cyclooxygenase Channel Of Prostaglandin Endoperoxide
H Synthase-1.
pdb|1IGZ|A Chain A, Crystal Structure Of Linoleic Acid Bound In The
Cyclooxygenase Channel Of Prostaglandin Endoperoxide H
Synthase-1.
pdb|1IGX|A Chain A, Crystal Structure Of Eicosapentanoic Acid Bound In The
Cyclooxygenase Channel Of Prostaglandin Endoperoxide H
Synthase-1
Length = 576
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 204 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 259
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 260 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 319
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 320 VIEEYVQQLSGYFLQ 334
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 52 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 111
Query: 129 AEMLRSLVEM 138
++++++ +M
Sbjct: 112 MDIVKAIYDM 121
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 52 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 111
Query: 1272 AEMLRSLVEM 1281
++++++ +M
Sbjct: 112 MDIVKAIYDM 121
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 42/70 (60%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ + +FN D G + F++F+ + + RG +KLR F++ D +++G I+K E+
Sbjct: 52 STYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEM 111
Query: 1431 AEMLRSLVEM 1440
++++++ +M
Sbjct: 112 MDIVKAIYDM 121
>pdb|1CQE|A Chain A, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen
pdb|1CQE|B Chain B, Prostaglandin H2 Synthase-1 Complex With Flurbiprofen
pdb|1EQG|A Chain A, The 2.6 Angstrom Model Of Ovine Cox-1 Complexed With
Ibuprofen
pdb|1EQG|B Chain B, The 2.6 Angstrom Model Of Ovine Cox-1 Complexed With
Ibuprofen
pdb|1EQH|A Chain A, The 2.7 Angstrom Model Of Ovine Cox-1 Complexed With
Flurbiprofen
pdb|1EQH|B Chain B, The 2.7 Angstrom Model Of Ovine Cox-1 Complexed With
Flurbiprofen
Length = 580
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 208 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 263
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 264 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 323
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 324 VIEEYVQQLSGYFLQ 338
>pdb|2OYE|P Chain P, Indomethacin-(r)-alpha-ethyl-ethanolamide Bound To
Cyclooxygenase-1
pdb|2OYU|P Chain P, Indomethacin-(S)-Alpha-Ethyl-Ethanolamide Bound To
Cyclooxygenase-1
Length = 600
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 58/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 228 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 283
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 284 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 343
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 344 VIEEYVQQLSGYFLQ 358
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 45.4 bits (106), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 1422
+LG ++ N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF 1475
G I EL + +L E LTD +V E I ++A +D + Y++F
Sbjct: 98 GYISAAELRHVXTNLGE-----KLTDEEVDEXI----READIDGDGQVNYEEF 141
Score = 41.6 bits (96), Expect = 0.004, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 1263
+LG ++ N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL + +L E LTD +V E I
Sbjct: 98 GYISAAELRHVXTNLGE-----KLTDEEVDEXI 125
Score = 37.4 bits (85), Expect = 0.082, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 120
+LG ++ N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 38 SLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL + +L E
Sbjct: 98 GYISAAELRHVXTNLGE 114
Score = 37.0 bits (84), Expect = 0.10, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + TE +L+ + D D NG ID E L
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF------L 69
Query: 1279 VEMARTTSLTDSQ 1291
AR TDS+
Sbjct: 70 TXXARKXKDTDSE 82
Score = 37.0 bits (84), Expect = 0.10, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + TE +L+ + D D NG ID E L
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF------L 69
Query: 1438 VEMARTTSLTDSQ 1450
AR TDS+
Sbjct: 70 TXXARKXKDTDSE 82
Score = 34.3 bits (77), Expect = 0.80, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
F++ DKDGDG I+ +E + TE +L+ + D D NG ID E
Sbjct: 16 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 68
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 70 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 130 EMLRSLVEM 138
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1273 EMLRSLVEM 1281
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1432 EMLRSLVEM 1440
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 70 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 130 EMLRSLVEM 138
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1273 EMLRSLVEM 1281
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1432 EMLRSLVEM 1440
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 70 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 64 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 123
Query: 130 EMLRSLVEM 138
E++ ++ +M
Sbjct: 124 EIVTAIFKM 132
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 64 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 123
Query: 1273 EMLRSLVEM 1281
E++ ++ +M
Sbjct: 124 EIVTAIFKM 132
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 64 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 123
Query: 1432 EMLRSLVEM 1440
E++ ++ +M
Sbjct: 124 EIVTAIFKM 132
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 70 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 130 EMLRSLVEM 138
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1273 EMLRSLVEM 1281
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ + +F D + DG + F+E++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1432 EMLRSLVEM 1440
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F +F + DKD +G I F+EF+ + SRG E+KL F++ D + +G I E+
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 1274 MLRSLVE-MARTTSLTDSQVT 1293
++ S+ + M +L + + T
Sbjct: 124 IVASVYKMMGSMVTLNEDEAT 144
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432
F +F + DKD +G I F+EF+ + SRG E+KL F++ D + +G I E+
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 1433 MLRSLVE-MARTTSLTDSQVT 1452
++ S+ + M +L + + T
Sbjct: 124 IVASVYKMMGSMVTLNEDEAT 144
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
F +F + DKD +G I F+EF+ + SRG E+KL F++ D + +G I E+
Sbjct: 64 FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLT 123
Query: 131 MLRSLVEM 138
++ S+ +M
Sbjct: 124 IVASVYKM 131
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 31/138 (22%)
Query: 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS---ALGMKSDAVFVRMMFNIV 1222
F+EA+AL D +G S+S +E A+ +LG+ V + N +
Sbjct: 13 FKEAFALF----------DKDNSG------SISASELATVMRSLGLSPSEAEVADLMNEI 56
Query: 1223 DKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
D DG+ I F EFL L SR +E +L F + D + +G+I EL +L S+
Sbjct: 57 DVDGNHAIEFSEFL---ALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113
Query: 1279 VEMARTTSLTDSQVTELI 1296
E LTD++V E++
Sbjct: 114 GE-----KLTDAEVDEML 126
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 31/138 (22%)
Query: 1325 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS---ALGMKSDAVFVRMMFNIV 1381
F+EA+AL D +G S+S +E A+ +LG+ V + N +
Sbjct: 13 FKEAFALF----------DKDNSG------SISASELATVMRSLGLSPSEAEVADLMNEI 56
Query: 1382 DKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
D DG+ I F EFL L SR +E +L F + D + +G+I EL +L S+
Sbjct: 57 DVDGNHAIEFSEFL---ALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113
Query: 1438 VEMARTTSLTDSQVTELI 1455
E LTD++V E++
Sbjct: 114 GE-----KLTDAEVDEML 126
Score = 39.3 bits (90), Expect = 0.022, Method: Composition-based stats.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 26/122 (21%)
Query: 23 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS---ALGMKSDAVFVRMMFNIV 79
F+EA+AL D +G S+S +E A+ +LG+ V + N +
Sbjct: 13 FKEAFALF----------DKDNSG------SISASELATVMRSLGLSPSEAEVADLMNEI 56
Query: 80 DKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
D DG+ I F EFL L SR +E +L F + D + +G+I EL +L S+
Sbjct: 57 DVDGNHAIEFSEFL---ALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113
Query: 136 VE 137
E
Sbjct: 114 GE 115
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ M + VD+DG G + F EFL +V S+G TE++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 1430 LAEMLRSLVEMARTTSLTDSQVTELI-DGMFQDAG-LDSKDFLTY 1472
L ML++ E ++T+ + EL+ DG + G +D +FL +
Sbjct: 117 LKIMLQATGE-----TITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ M + VD+DG G + F EFL +V S+G TE++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 1271 LAEMLRSLVEMARTTSLTDSQVTELI 1296
L ML++ E ++T+ + EL+
Sbjct: 117 LKIMLQATGE-----TITEDDIEELM 137
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ M + VD+DG G + F EFL +V S+G TE++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEE 116
Query: 128 LAEMLRSLVE 137
L ML++ E
Sbjct: 117 LKIMLQATGE 126
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 1196 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 1248
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 82
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
+L F + D + +G+I EL +L S+ E LTD++V +++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDDML 125
Score = 44.7 bits (104), Expect = 6e-04, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 15/108 (13%)
Query: 1355 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 1407
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 82
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1455
+L F + D + +G+I EL +L S+ E LTD++V +++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDDML 125
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 53 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 105
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 82
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+L F + D + +G+I EL +L S+ E
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
Score = 30.4 bits (67), Expect = 9.8, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 25/145 (17%)
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTEL-----IDGMFQSPRELMLA 1309
F + D D NG I ELA ++RSL S ++++V +L +DG Q LA
Sbjct: 16 FALFDKDNNGSISSSELATVMRSL-----GLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 1310 KAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369
+R+ + E EA+ + D+ G+ ++ + + S +
Sbjct: 71 LM-SRQLKSNDSEQELLEAFKVF------------DKNGDGLISAAELKHVLTSIGEKLT 117
Query: 1370 DAVFVRMMFNIVDKDGDGRISFQEF 1394
DA M+ + DG G I+ Q+F
Sbjct: 118 DAEVDDMLREV--SDGSGEINIQQF 140
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 44.3 bits (103), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 1422
+LG ++ N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 98
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF 1475
G I EL + +L E LTD +V + I ++A +D + Y++F
Sbjct: 99 GYISAAELRHVXTNLGE-----KLTDEEVDQXI----READIDGDGQVNYEEF 142
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 1263
+LG ++ N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 98
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G I EL + +L E LTD +V + I
Sbjct: 99 GYISAAELRHVXTNLGE-----KLTDEEVDQXI 126
Score = 37.4 bits (85), Expect = 0.082, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRN 120
+LG ++ N VD DG+G I F EFL + +E+++R F + D D N
Sbjct: 39 SLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGN 98
Query: 121 GVIDKGELAEMLRSLVE 137
G I EL + +L E
Sbjct: 99 GYISAAELRHVXTNLGE 115
Score = 37.0 bits (84), Expect = 0.10, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + TE +L+ + D D NG ID E L
Sbjct: 17 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF------L 70
Query: 1279 VEMARTTSLTDSQ 1291
AR TDS+
Sbjct: 71 TXXARKXKDTDSE 83
Score = 37.0 bits (84), Expect = 0.10, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + TE +L+ + D D NG ID E L
Sbjct: 17 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF------L 70
Query: 1438 VEMARTTSLTDSQ 1450
AR TDS+
Sbjct: 71 TXXARKXKDTDSE 83
Score = 34.3 bits (77), Expect = 0.79, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
F++ DKDGDG I+ +E + TE +L+ + D D NG ID E
Sbjct: 17 FSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEF 69
>pdb|1U67|A Chain A, Crystal Structure Of Arachidonic Acid Bound To A Mutant Of
Prostagladin H Synthase-1 That Forms Predominantly
11-hpete
Length = 600
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/125 (21%), Positives = 55/125 (44%), Gaps = 5/125 (4%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 228 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 283
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R HN + ++ +HP DE++FQ R +++ +
Sbjct: 284 QMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGDEQLFQTARLILIGETIKI 343
Query: 611 IAYEY 615
+ EY
Sbjct: 344 VIEEY 348
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent
Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And
The Junction Domain (Jd)
Length = 188
Score = 44.3 bits (103), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 25/137 (18%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++ +F ++D D G I+F E D + E +++ + D D D++G ID GE
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 1434 LRSLVEMARTTSLTDS------------QVTEL-------------IDGMFQDAGLDSKD 1468
L ++ R +L + + E+ ID M ++ D+
Sbjct: 72 TVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDG 131
Query: 1469 FLTYQDFKLMMRDYKGD 1485
+ Y +F MMR KG+
Sbjct: 132 QIDYGEFAAMMRKRKGN 148
Score = 40.0 bits (92), Expect = 0.015, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
++ +F ++D D G I+F E D + E +++ + D D D++G ID GE
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 1275 LRSLVEMARTTSLTDS 1290
L ++ R +L +
Sbjct: 72 TVHLNKLEREENLVSA 87
Score = 38.5 bits (88), Expect = 0.040, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
++ +F ++D D G I+F E D + E +++ + D D D++G ID GE
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA 71
Query: 132 LRSLVEMAR 140
L ++ R
Sbjct: 72 TVHLNKLER 80
Score = 35.4 bits (80), Expect = 0.34, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRG--HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F+ DKDG G I+ E F H +D ++ I D D +G ID GE A M+R
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEI----DQDNDGQIDYGEFAAMMR 143
Score = 35.4 bits (80), Expect = 0.34, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRG--HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F+ DKDG G I+ E F H +D ++ I D D +G ID GE A M+R
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEI----DQDNDGQIDYGEFAAMMR 143
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 70 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ + +F D + DG + F++++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 130 EMLRSLVEM 138
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ + +F D + DG + F++++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1273 EMLRSLVEM 1281
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ + +F D + DG + F++++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1432 EMLRSLVEM 1440
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 70 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ + +F D + DG + F++++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 130 EMLRSLVEM 138
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ + +F D + DG + F++++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1273 EMLRSLVEM 1281
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ + +F D + DG + F++++ + + S G T KL F + D D NG I K E+
Sbjct: 63 AYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVL 122
Query: 1432 EMLRSLVEM 1440
E++ ++ +M
Sbjct: 123 EIVTAIFKM 131
>pdb|1CVU|A Chain A, Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Active Site Of Cox-2
pdb|1CVU|B Chain B, Crystal Structure Of Arachidonic Acid Bound To The
Cyclooxygenase Active Site Of Cox-2
Length = 552
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 197 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 253
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R H + ++ +HPE DE++FQ ++ +++
Sbjct: 254 ----FAVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGET 309
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 310 IKIVIEDYVQHLSG 323
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 1430 LAEMLRSLVEMARTTSLTDSQVTELI-DGMFQDAG-LDSKDFLTY 1472
L ML+ A ++T+ + EL+ DG + G +D +FL +
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 1271 LAEMLRSLVEMARTTSLTDSQVTELI 1296
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 40.4 bits (93), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDE 116
Query: 128 LAEMLRSLVE 137
L ML++ E
Sbjct: 117 LKIMLQATGE 126
>pdb|3PGH|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|3PGH|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Flurbiprofen
pdb|4COX|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|4COX|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Non- Selective Inhibitor, Indomethacin
pdb|5COX|A Chain A, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|B Chain B, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|C Chain C, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|5COX|D Chain D, Uninhibited Mouse Cyclooxygenase-2 (Prostaglandin
Synthase-2)
pdb|6COX|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558 In I222 Space Group
pdb|6COX|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558 In I222 Space Group
pdb|1CX2|A Chain A, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|B Chain B, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|C Chain C, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
pdb|1CX2|D Chain D, Cyclooxygenase-2 (Prostaglandin Synthase-2) Complexed With
A Selective Inhibitor, Sc-558
Length = 587
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 61/134 (45%), Gaps = 11/134 (8%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDASG----KMPVKNTMRVPLFNNPVPHSLRTLS 547
+D + IY + + +R F +G L G VK+T ++ +P +L+
Sbjct: 197 VDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPPHIPENLQ--- 253
Query: 548 PERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASL 607
+ +G P L+ ++ ++ R H + ++ +HPE DE++FQ ++ +++
Sbjct: 254 ----FAVGQEVFGLVPGLMMYATIWLREHQRVCDILKQEHPEWGDEQLFQTSKLILIGET 309
Query: 608 QNVIAYEYIPAFLG 621
++ +Y+ G
Sbjct: 310 IKIVIEDYVQHLSG 323
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 1430 LAEMLRSLVEMARTTSLTDSQVTELI-DGMFQDAG-LDSKDFLTY 1472
L ML+ A ++T+ + EL+ DG + G +D +FL +
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 1271 LAEMLRSLVEMARTTSLTDSQVTELI 1296
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDE 116
Query: 128 LAEMLRSLVE 137
L ML++ E
Sbjct: 117 LKIMLQATGE 126
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer Bepridil
At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 58/105 (55%), Gaps = 11/105 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 1430 LAEMLRSLVEMARTTSLTDSQVTELI-DGMFQDAG-LDSKDFLTY 1472
L ML+ A ++T+ + EL+ DG + G +D +FL +
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 1271 LAEMLRSLVEMARTTSLTDSQVTELI 1296
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 39.7 bits (91), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEE 116
Query: 128 LAEMLRSLVE 137
L ML++ E
Sbjct: 117 LKIMLQATGE 126
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And Kinase-
Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And Kinase-
Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1389 ISFQEFLDTVVLFSRGHTED-KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1447
+SF++FLD + +FS T D K F + D D +G +++ +L+ ++ L T L+
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS 137
Query: 1448 DSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
S++ +LID + +++ +D + +F+
Sbjct: 138 ASEMKQLIDNILEESDIDRDGTINLSEFQ 166
Score = 38.5 bits (88), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1230 ISFQEFLDTVVLFSRGHTED-KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1288
+SF++FLD + +FS T D K F + D D +G +++ +L+ ++ L T L+
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS 137
Query: 1289 DSQVTELIDGMFQ 1301
S++ +LID + +
Sbjct: 138 ASEMKQLIDNILE 150
>pdb|1PRH|A Chain A, The X-Ray Crystal Structure Of The Membrane Protein
Prostaglandin H2 Synthase-1
pdb|1PRH|B Chain B, The X-Ray Crystal Structure Of The Membrane Protein
Prostaglandin H2 Synthase-1
Length = 554
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 5/135 (3%)
Query: 492 IDGSFIYSTSEAWLNAMRSFTNGSLATDA-SGKMPVKNTMRVPLFNNPVPHSLRTLSPER 550
+D IY + +R F +G L +G++ + P+ H R + P+
Sbjct: 196 VDLGHIYGDNLERQYQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLM----HYPRGIPPQS 251
Query: 551 LYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNV 610
+G P L+ ++ ++ R H + ++ +HP DE++FQ + +++ +
Sbjct: 252 QMAVGQEVFGLLPGLMLYATIWLREHQRVCDLLKAEHPTWGDEQLFQTAKLILIGETIKI 311
Query: 611 IAYEYIPAFLGRSLS 625
+ EY+ G L
Sbjct: 312 VIEEYVQQLSGYFLQ 326
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 42.4 bits (98), Expect = 0.002, Method: Composition-based stats.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 1128 EGFLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1187
+GF++ LI V+ + L+ + E RQ+ F R A L GL PG R E
Sbjct: 28 DGFISREDYELIAVRIAKIAKLSAEKAEETRQE----FLRVADQL--GLAPGV--RISVE 79
Query: 1188 TGEVVMRTSLSRAEFASALGMKSDAVFVRMM-FNIVDKDGDGRISFQEFLDTVVLFSRGH 1246
V SL + + K+ AV ++ ++ +D D DG +S EF +
Sbjct: 80 EAAVNATDSLLKXKGEE----KAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFLQAVGPDL 135
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
T+DK F+ D ++NG I + E + + T+L ++ +L+D
Sbjct: 136 TDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALANAFYGDLVD 186
Score = 37.7 bits (86), Expect = 0.067, Method: Composition-based stats.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 9/143 (6%)
Query: 1315 ERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFV 1374
E+ ++ + F R A L GL PG R E V SL + + K+ AV
Sbjct: 52 EKAEETRQEFLRVADQL--GLAPGV--RISVEEAAVNATDSLLKXKGEE----KAXAVIQ 103
Query: 1375 RMM-FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++ ++ +D D DG +S EF + T+DK F+ D ++NG I + E
Sbjct: 104 SLIXYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVT 163
Query: 1434 LRSLVEMARTTSLTDSQVTELID 1456
+ + T+L ++ +L+D
Sbjct: 164 VNDFLFGLEETALANAFYGDLVD 186
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 66 KSDAVFVRMM-FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
K+ AV ++ ++ +D D DG +S EF + T+DK F+ D ++NG I
Sbjct: 97 KAXAVIQSLIXYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQIS 156
Query: 125 KGEL 128
+ E
Sbjct: 157 RDEF 160
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1389 ISFQEFLDTVVLFSRGHTED-KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1447
+SF++FLD + +FS T D K F + D D +G +++ +L+ ++ L T L+
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS 168
Query: 1448 DSQVTELIDGMFQDAGLDSKDFLTYQDFK 1476
S++ +LID + +++ +D + +F+
Sbjct: 169 ASEMKQLIDNILEESDIDRDGTINLSEFQ 197
Score = 38.1 bits (87), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 1230 ISFQEFLDTVVLFSRGHTED-KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1288
+SF++FLD + +FS T D K F + D D +G +++ +L+ ++ L T L+
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLS 168
Query: 1289 DSQVTELIDGMFQ 1301
S++ +LID + +
Sbjct: 169 ASEMKQLIDNILE 181
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 1271 LAEMLRSLVEMARTTSLTDSQVTELI 1296
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 1430 LAEMLRSLVEMARTTSLTDSQVTELI 1455
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 128 LAEMLRSLVE 137
L ML++ E
Sbjct: 117 LKIMLQATGE 126
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 1271 LAEMLRSLVEMARTTSLTDSQVTELI 1296
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 1430 LAEMLRSLVEMARTTSLTDSQVTELI 1455
L ML+ A ++T+ + EL+
Sbjct: 117 LKIMLQ-----ATGETITEDDIEELM 137
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ M + VD+DG G + F EFL +V S+G +E++L +F M D + +G ID E
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDE 116
Query: 128 LAEMLRSLVE 137
L ML++ E
Sbjct: 117 LKIMLQATGE 126
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 1196 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 1248
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 82
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292
+L F + D + +G+I EL +L S+ E LTD+++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEL 121
Score = 41.6 bits (96), Expect = 0.005, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 15/104 (14%)
Query: 1355 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 1407
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 82
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1451
+L F + D + +G+I EL +L S+ E LTD+++
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEL 121
Score = 40.4 bits (93), Expect = 0.010, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 53 SLSRAEFAS---ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTE 105
S+S +E A+ +LG+ V + N +D DG+ +I F EFL L SR +E
Sbjct: 26 SISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL---ALMSRQLKSNDSE 82
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+L F + D + +G+I EL +L S+ E
Sbjct: 83 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE 114
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTE---DKLRIIFDMCDNDRNGVIDKGELAEML 132
F + DKDG G+IS +E LFS+ + ++L I + DN+++G +D E EML
Sbjct: 423 FKMFDKDGSGKISTKELFK---LFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Query: 133 RSLV 136
++ V
Sbjct: 480 QNFV 483
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTE---DKLRIIFDMCDNDRNGVIDKGELAEML 1275
F + DKDG G+IS +E LFS+ + ++L I + DN+++G +D E EML
Sbjct: 423 FKMFDKDGSGKISTKELFK---LFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Query: 1276 RSLV 1279
++ V
Sbjct: 480 QNFV 483
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTE---DKLRIIFDMCDNDRNGVIDKGELAEML 1434
F + DKDG G+IS +E LFS+ + ++L I + DN+++G +D E EML
Sbjct: 423 FKMFDKDGSGKISTKELFK---LFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEML 479
Query: 1435 RSLV 1438
++ V
Sbjct: 480 QNFV 483
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 1182 RRRDDETGEVVMRTSLSRA--EFASALGMKSDAVF----------VRMMFNIVDKDGDGR 1229
R+ D ++ R L R EF G+ S+++ + + ++D DG G
Sbjct: 338 RKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGS 397
Query: 1230 ISFQEF----LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEMA 1282
I + EF +D +L SR +++ F M D D +G I EL ++ S ++M
Sbjct: 398 IEYSEFIASAIDRTILLSR----ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME 453
Query: 1283 RTTSLTDSQVTELIDG 1298
S+ + QV DG
Sbjct: 454 ELESIIE-QVDNNKDG 468
Score = 32.0 bits (71), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 24/136 (17%)
Query: 1341 RRRDDETGEVVMRTSLSRA--EFASALGMKSDAVF----------VRMMFNIVDKDGDGR 1388
R+ D ++ R L R EF G+ S+++ + + ++D DG G
Sbjct: 338 RKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGS 397
Query: 1389 ISFQEF----LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEMA 1441
I + EF +D +L SR +++ F M D D +G I EL ++ S ++M
Sbjct: 398 IEYSEFIASAIDRTILLSR----ERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME 453
Query: 1442 RTTSLTDSQVTELIDG 1457
S+ + QV DG
Sbjct: 454 ELESIIE-QVDNNKDG 468
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From
Human Epithelial Cells
Length = 148
Score = 40.8 bits (94), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1422
+LG +R M + +D+DG+G + F EFL + E+++R F + D D N
Sbjct: 38 SLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGN 97
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF 1475
G + EL ++ L E L+D +V E+I + A D + Y++F
Sbjct: 98 GFVSAAELRHVMTRLGE-----KLSDEEVDEMI----RAADTDGDGQVNYEEF 141
Score = 40.4 bits (93), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 1263
+LG +R M + +D+DG+G + F EFL + E+++R F + D D N
Sbjct: 38 SLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGN 97
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
G + EL ++ L E L+D +V E+I
Sbjct: 98 GFVSAAELRHVMTRLGE-----KLSDEEVDEMI 125
Score = 35.4 bits (80), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRN 120
+LG +R M + +D+DG+G + F EFL + E+++R F + D D N
Sbjct: 38 SLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGN 97
Query: 121 GVIDKGELAEMLRSLVE 137
G + EL ++ L E
Sbjct: 98 GFVSAAELRHVMTRLGE 114
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +LR + D D NG +D E M
Sbjct: 16 FSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TD++
Sbjct: 72 --MARKMKDTDNE 82
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +LR + D D NG +D E M
Sbjct: 16 FSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TD++
Sbjct: 72 --MARKMKDTDNE 82
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
F++ DKDGDG I+ +E + + TE +LR + D D NG +D
Sbjct: 16 FSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVD 64
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 40.4 bits (93), Expect = 0.011, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 1362 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRII 1413
AS L + + + +F +DK+GDG++ QE +D V +F E ++ I
Sbjct: 53 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 112
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
D DRNG ID E V M R + L+ ++ QD
Sbjct: 113 LGAADFDRNGYIDYSEFVT-----VAMDRKSLLSKDKLESAFQKFDQDG 156
Score = 38.9 bits (89), Expect = 0.029, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 41/94 (43%), Gaps = 13/94 (13%)
Query: 60 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRII 111
AS L + + + +F +DK+GDG++ QE +D V +F E ++ I
Sbjct: 53 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 112
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPS 145
D DRNG ID E V M R S S
Sbjct: 113 LGAADFDRNGYIDYSEFVT-----VAMDRKSLLS 141
Score = 38.9 bits (89), Expect = 0.029, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 13/98 (13%)
Query: 1203 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRII 1254
AS L + + + +F +DK+GDG++ QE +D V +F E ++ I
Sbjct: 53 ASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAI 112
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292
D DRNG ID E V M R + L+ ++
Sbjct: 113 LGAADFDRNGYIDYSEFVT-----VAMDRKSLLSKDKL 145
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRII--FDMCDNDR 1262
ALG + ++ M + +DKDG G I F+EFL T++ G + + I+ F + D+D
Sbjct: 56 ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL-TMMTAKMGERDSREEILKAFRLFDDDN 114
Query: 1263 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
+G I +L + + L E +LT+ ++ E+I
Sbjct: 115 SGTITIKDLRRVAKELGE-----NLTEEELQEMI 143
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRII--FDMCDNDR 1421
ALG + ++ M + +DKDG G I F+EFL T++ G + + I+ F + D+D
Sbjct: 56 ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL-TMMTAKMGERDSREEILKAFRLFDDDN 114
Query: 1422 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1455
+G I +L + + L E +LT+ ++ E+I
Sbjct: 115 SGTITIKDLRRVAKELGE-----NLTEEELQEMI 143
Score = 36.6 bits (83), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRII--FDMCDNDR 119
ALG + ++ M + +DKDG G I F+EFL T++ G + + I+ F + D+D
Sbjct: 56 ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL-TMMTAKMGERDSREEILKAFRLFDDDN 114
Query: 120 NGVIDKGELAEMLRSLVE 137
+G I +L + + L E
Sbjct: 115 SGTITIKDLRRVAKELGE 132
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 39.7 bits (91), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 1245 GHTEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSL------VEMARTTSLTDSQVTEL 1295
G TE++ +R FD+ D D +G ID EL +R+L E+ + + D +
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 1296 IDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTS 1355
ID F+ ++M AK R+ R++ ++ F + DDETG++ + +
Sbjct: 61 ID--FEEFLQMMTAKMGERDSREEIMKAF---------------RLFDDDETGKISFK-N 102
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L R A LG ++ M + D+DGDG ++ +EF
Sbjct: 103 LKRV--AKELGENMTDEELQEMIDEADRDGDGEVNEEEFF 140
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTEDKLRIIFDMCDNDR 1262
ALG + ++ M +DKDG G I F+EFL T + R E+ ++ F + D+D
Sbjct: 36 ALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMK-AFRLFDDDE 94
Query: 1263 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
G I L + + L E ++TD ++ E+ID
Sbjct: 95 TGKISFKNLKRVAKELGE-----NMTDEELQEMID 124
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 8/95 (8%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTEDKLRIIFDMCDNDR 1421
ALG + ++ M +DKDG G I F+EFL T + R E+ ++ F + D+D
Sbjct: 36 ALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMK-AFRLFDDDE 94
Query: 1422 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1456
G I L + + L E ++TD ++ E+ID
Sbjct: 95 TGKISFKNLKRVAKELGE-----NMTDEELQEMID 124
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTEDKLRIIFDMCDNDR 119
ALG + ++ M +DKDG G I F+EFL T + R E+ ++ F + D+D
Sbjct: 36 ALGFEPKKEEIKKMIADIDKDGSGTIDFEEFLQMMTAKMGERDSREEIMK-AFRLFDDDE 94
Query: 120 NGVI 123
G I
Sbjct: 95 TGKI 98
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.7 bits (91), Expect = 0.018, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 79 VDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
VD D +G I + EF +D +LFS E++LR F++ D D++G I K ELA +
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFS----EERLRRAFNLFDTDKSGKITKEELANLF 461
Score = 39.7 bits (91), Expect = 0.018, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 1222 VDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
VD D +G I + EF +D +LFS E++LR F++ D D++G I K ELA +
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFS----EERLRRAFNLFDTDKSGKITKEELANLF 461
Score = 39.7 bits (91), Expect = 0.018, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 1381 VDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
VD D +G I + EF +D +LFS E++LR F++ D D++G I K ELA +
Sbjct: 408 VDFDKNGYIEYSEFISVCMDKQILFS----EERLRRAFNLFDTDKSGKITKEELANLF 461
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 12/119 (10%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL--FSRGHTEDKLRIIFDMCDNDR 1421
ALG + ++ M + +DK+G G+++F +FL TV+ S T++++ F + D+D
Sbjct: 34 ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL-TVMTQKMSEKDTKEEILKAFKLFDDDE 92
Query: 1422 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
G I L + + L E +LTD ++ E+ID +A D ++ Q+F +M+
Sbjct: 93 TGKISFKNLKRVAKELGE-----NLTDEELQEMID----EADRDGDGEVSEQEFLRIMK 142
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL--FSRGHTEDKLRIIFDMCDNDR 1262
ALG + ++ M + +DK+G G+++F +FL TV+ S T++++ F + D+D
Sbjct: 34 ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL-TVMTQKMSEKDTKEEILKAFKLFDDDE 92
Query: 1263 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
G I L + + L E +LTD ++ E+ID
Sbjct: 93 TGKISFKNLKRVAKELGE-----NLTDEELQEMID 122
Score = 37.7 bits (86), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 28/153 (18%)
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSL------VEMARTTSLTDSQVTELID-GMFQS 1302
++R FD+ D D G ID EL +R+L E+ + S D + T ++ G F +
Sbjct: 7 EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 1303 PRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA 1362
+++ +T+E K + F DDETG++ + +L R A
Sbjct: 67 VMTQKMSEKDTKEEILKAFKLF------------------DDDETGKISFK-NLKRV--A 105
Query: 1363 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
LG ++ M + D+DGDG +S QEFL
Sbjct: 106 KELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Score = 33.9 bits (76), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 90 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Score = 33.9 bits (76), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 90 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL--FSRGHTEDKLRIIFDMCDNDR 119
ALG + ++ M + +DK+G G+++F +FL TV+ S T++++ F + D+D
Sbjct: 34 ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL-TVMTQKMSEKDTKEEILKAFKLFDDDE 92
Query: 120 NGVI 123
G I
Sbjct: 93 TGKI 96
>pdb|4HHR|A Chain A, Crystal Structure Of Fatty Acid Alpha-dioxygenase
(arabidopsis Thaliana)
pdb|4HHS|A Chain A, Crystal Structure Of Fatty Acid Alpha-dioxygenase
(arabidopsis Thaliana)
Length = 652
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 800 DLGALNIMRGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSY 859
DL AL I R R+ + YN R + + + W DL +E ++ L Y
Sbjct: 490 DLAALEIYRDRERSVPRYNEFRRSMFMIPITKWEDL----------TEDEEAIEVLDDVY 539
Query: 860 GNSLDNIDLYIGGMLESHEGPGPLFTN---IILEQFTRLRDADRFWFENTENGMFTAAEV 916
++ +DL +G M E + I L TR +ADRF+ + ++T +
Sbjct: 540 DGDVEELDLLVGLMAEKKIKGFAISETAFYIFLIMATRRLEADRFFTSDFNETIYTKKGL 599
Query: 917 EAIRKI-TLWDII 928
E + +L D+I
Sbjct: 600 EWVNTTESLKDVI 612
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.9 bits (89), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 13/110 (11%)
Query: 1361 FASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRI 1412
AS L + + + +F +DK+GDG++ QE +D V +F E ++
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394
Query: 1413 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
I D DRNG ID E V M R + L+ ++ QD
Sbjct: 395 ILGAADFDRNGYIDYSEFV-----TVAMDRKSLLSKDKLESAFQKFDQDG 439
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 59 FASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRI 110
AS L + + + +F +DK+GDG++ QE +D V +F E ++
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394
Query: 111 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPS 145
I D DRNG ID E V M R S S
Sbjct: 395 ILGAADFDRNGYIDYSEFV-----TVAMDRKSLLS 424
Score = 38.1 bits (87), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 13/99 (13%)
Query: 1202 FASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRI 1253
AS L + + + +F +DK+GDG++ QE +D V +F E ++
Sbjct: 335 MASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDA 394
Query: 1254 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292
I D DRNG ID E V M R + L+ ++
Sbjct: 395 ILGAADFDRNGYIDYSEFV-----TVAMDRKSLLSKDKL 428
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 38.9 bits (89), Expect = 0.032, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ + +F D + DG + F+E++ + + G T KL F + D D NG I K E+ E
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 131 MLRSL 135
++ ++
Sbjct: 132 IVXAI 136
Score = 38.9 bits (89), Expect = 0.032, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ + +F D + DG + F+E++ + + G T KL F + D D NG I K E+ E
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 1274 MLRSL 1278
++ ++
Sbjct: 132 IVXAI 136
Score = 38.9 bits (89), Expect = 0.032, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432
+ + +F D + DG + F+E++ + + G T KL F + D D NG I K E+ E
Sbjct: 72 YAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLE 131
Query: 1433 MLRSL 1437
++ ++
Sbjct: 132 IVXAI 136
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 38.5 bits (88), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 1128 EGFLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1187
+GF++ LI V+ + L+ + E RQ F R A L GL PG
Sbjct: 28 DGFISREDYELIAVRIAKIAKLSAEKAEETRQ----EFLRVADQL--GLAPG-------- 73
Query: 1188 TGEVVMRTSLSRAEFA---SALGMKSD----AVFVRM-MFNIVDKDGDGRISFQEFLDTV 1239
+R S+ A S L MK + AV + M++ +D D DG +S EF +
Sbjct: 74 -----VRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFL 128
Query: 1240 VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
T+DK F+ D ++NG I + E + + T+L ++ +L+D
Sbjct: 129 QAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALANAFYGDLVD 186
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 1315 ERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA---SALGMKSD- 1370
E+ ++ + F R A L GL PG +R S+ A S L MK +
Sbjct: 52 EKAEETRQEFLRVADQL--GLAPG-------------VRISVEEAAVNATDSLLKMKGEE 96
Query: 1371 ---AVFVRM-MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1426
AV + M++ +D D DG +S EF + T+DK F+ D ++NG I
Sbjct: 97 KAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQIS 156
Query: 1427 KGELAEMLRSLVEMARTTSLTDSQVTELID 1456
+ E + + T+L ++ +L+D
Sbjct: 157 RDEFLVTVNDFLFGLEETALANAFYGDLVD 186
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 74 MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
+M++ +D D DG +S EF + T+DK F+ D ++NG I + E
Sbjct: 106 IMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDE 159
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 38.1 bits (87), Expect = 0.050, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 38.1 bits (87), Expect = 0.050, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 38.1 bits (87), Expect = 0.050, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 38.1 bits (87), Expect = 0.050, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Score = 38.1 bits (87), Expect = 0.050, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
Score = 38.1 bits (87), Expect = 0.050, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 17 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 38.1 bits (87), Expect = 0.051, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 38.1 bits (87), Expect = 0.051, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 38.1 bits (87), Expect = 0.051, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 38.1 bits (87), Expect = 0.054, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 135 L 135
+
Sbjct: 65 I 65
Score = 38.1 bits (87), Expect = 0.054, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 1278 L 1278
+
Sbjct: 65 I 65
Score = 38.1 bits (87), Expect = 0.054, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 1437 L 1437
+
Sbjct: 65 I 65
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal
Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal
Domain Fragment, Residues 1-90
Length = 90
Score = 38.1 bits (87), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1279 VEMARTTSLTDSQ 1291
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 38.1 bits (87), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTM---- 71
Query: 1438 VEMARTTSLTDSQ 1450
MAR TDS+
Sbjct: 72 --MARKMKDTDSE 82
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 38.1 bits (87), Expect = 0.056, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 135 L 135
+
Sbjct: 65 I 65
Score = 38.1 bits (87), Expect = 0.056, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 1278 L 1278
+
Sbjct: 65 I 65
Score = 38.1 bits (87), Expect = 0.056, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 1437 L 1437
+
Sbjct: 65 I 65
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 38.1 bits (87), Expect = 0.057, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 136 VE 137
V+
Sbjct: 76 VK 77
Score = 38.1 bits (87), Expect = 0.057, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 1279 VE 1280
V+
Sbjct: 76 VK 77
Score = 38.1 bits (87), Expect = 0.057, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLMAKK 75
Query: 1438 VE 1439
V+
Sbjct: 76 VK 77
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 37.7 bits (86), Expect = 0.058, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 135 L 135
+
Sbjct: 65 I 65
Score = 37.7 bits (86), Expect = 0.058, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 1278 L 1278
+
Sbjct: 65 I 65
Score = 37.7 bits (86), Expect = 0.058, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 32/61 (52%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+ S
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS 64
Query: 1437 L 1437
+
Sbjct: 65 I 65
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
Score = 37.7 bits (86), Expect = 0.068, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F + DKDGDG I+ +E + + TE++L+ + D D NG I+ E ++
Sbjct: 16 FGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFLSLM 72
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 37.4 bits (85), Expect = 0.097, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 9/73 (12%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
E++L+ F + D D+NG I EL ++ +L E LTD +V ++I ++A LD
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGE-----KLTDEEVEQMI----KEADLDG 53
Query: 1467 KDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 54 DGQVNYEEFVKMM 66
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 37.0 bits (84), Expect = 0.100, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F++ DKDGDG I+ +E + TE +L+ + + D D NG ID E M+ +
Sbjct: 16 FSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARI 75
Query: 136 VE 137
++
Sbjct: 76 MK 77
Score = 37.0 bits (84), Expect = 0.100, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F++ DKDGDG I+ +E + TE +L+ + + D D NG ID E M+ +
Sbjct: 16 FSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARI 75
Query: 1279 VE 1280
++
Sbjct: 76 MK 77
Score = 37.0 bits (84), Expect = 0.100, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F++ DKDGDG I+ +E + TE +L+ + + D D NG ID E M+ +
Sbjct: 16 FSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLTMMARI 75
Query: 1438 VE 1439
++
Sbjct: 76 MK 77
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
M N VD DG+G I F EFL + +E+++R F + D D NG I EL ++
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 134 SL 135
+L
Sbjct: 66 NL 67
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
M N VD DG+G I F EFL + +E+++R F + D D NG I EL ++
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 1277 SL 1278
+L
Sbjct: 66 NL 67
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
M N VD DG+G I F EFL + +E+++R F + D D NG I EL ++
Sbjct: 6 MINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMT 65
Query: 1436 SL 1437
+L
Sbjct: 66 NL 67
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 37.0 bits (84), Expect = 0.11, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READID 77
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 78 GDGQVNYEEFVQMM 91
Score = 30.4 bits (67), Expect = 9.3, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
+E+++R F + D D NG I EL ++ +L E LTD +V E+I
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI 71
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 37.0 bits (84), Expect = 0.11, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READIDG 51
Query: 1467 KDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 52 DGQVNYEEFVQMM 64
Score = 31.2 bits (69), Expect = 6.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+R F + DKDG+G IS E + T++++ + D D +G ++ E +M
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 132 L 132
+
Sbjct: 64 M 64
Score = 31.2 bits (69), Expect = 6.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+R F + DKDG+G IS E + T++++ + D D +G ++ E +M
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 1275 L 1275
+
Sbjct: 64 M 64
Score = 31.2 bits (69), Expect = 6.6, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+R F + DKDG+G IS E + T++++ + D D +G ++ E +M
Sbjct: 4 IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 63
Query: 1434 L 1434
+
Sbjct: 64 M 64
Score = 30.4 bits (67), Expect = 9.6, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296
E+++R F + D D NG I EL ++ +L E LTD +V E+I
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI 44
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 36.2 bits (82), Expect = 0.20, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E ++
Sbjct: 16 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Score = 36.2 bits (82), Expect = 0.20, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E ++
Sbjct: 16 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
Score = 36.2 bits (82), Expect = 0.20, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E ++
Sbjct: 16 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLM 72
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 36.2 bits (82), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 35.8 bits (81), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
Score = 35.4 bits (80), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D NG ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 72
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 63 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNG 121
G++ + MFN D G+G+I F EFL + + +ED LR F D + G
Sbjct: 35 FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTG 94
Query: 122 VIDKGELAEMLRSL 135
I K L + L +L
Sbjct: 95 YIPKAALQDALLNL 108
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1206 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNG 1264
G++ + MFN D G+G+I F EFL + + +ED LR F D + G
Sbjct: 35 FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTG 94
Query: 1265 VIDKGELAEMLRSL 1278
I K L + L +L
Sbjct: 95 YIPKAALQDALLNL 108
Score = 35.4 bits (80), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNG 1423
G++ + MFN D G+G+I F EFL + + +ED LR F D + G
Sbjct: 35 FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTG 94
Query: 1424 VIDKGELAEMLRSL 1437
I K L + L +L
Sbjct: 95 YIPKAALQDALLNL 108
>pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
pdb|1EG4|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
Length = 261
Score = 35.0 bits (79), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 40/97 (41%), Gaps = 1/97 (1%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+ N+ D GRI F ++ + H EDK R +F + G D+ L +L
Sbjct: 137 LLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASS-TGFCDQRRLGLLLHD 195
Query: 135 LVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNID 171
+++ R + ++ +R + + N+ I+
Sbjct: 196 SIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPEIE 232
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ N+ D GRI F ++ + H EDK R +F + G D+ L +L
Sbjct: 137 LLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASS-TGFCDQRRLGLLLHD 195
Query: 1437 LVEMAR----TTSLTDSQVTELIDGMFQDAG 1463
+++ R S S + + FQ A
Sbjct: 196 SIQIPRQLGEVASFGGSNIEPSVRSCFQFAN 226
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ N+ D GRI F ++ + H EDK R +F + G D+ L +L
Sbjct: 137 LLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVASS-TGFCDQRRLGLLLHD 195
Query: 1278 LVEMAR 1283
+++ R
Sbjct: 196 SIQIPR 201
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE 127
++ +F ++D D G I+F E D + E +++ + D D D++G ID GE
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 80
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE 1270
++ +F ++D D G I+F E D + E +++ + D D D++G ID GE
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 80
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE 1429
++ +F ++D D G I+F E D + E +++ + D D D++G ID GE
Sbjct: 25 LKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGE 80
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 35.0 bits (79), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E++L+ F + D D+NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGE-----KLTDEEVDEMI----READVD 52
Query: 1466 SKDFLTYQDF-KLMM 1479
+ Y++F K+MM
Sbjct: 53 GDGQINYEEFVKVMM 67
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 35.0 bits (79), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 10/75 (13%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
E++L+ F + D D+NG I EL ++ +L E LTD +V ++I ++A LD
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGE-----KLTDEEVEQMI----KEADLD 57
Query: 1466 SKDFLTYQDF-KLMM 1479
+ Y++F K+MM
Sbjct: 58 GDGQVNYEEFVKMMM 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 34.7 bits (78), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READID 53
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 54 GDGQVNYEEFVQMM 67
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READID 53
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 54 GDGQVNYEEFVQMM 67
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 22 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 70
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 22 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 70
Score = 34.3 bits (77), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 22 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 70
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic
Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis
In Presence Of C-Terminal Calmodulin And 1mm Calcium
Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes Catalytic
Domain Of Adenylyl Cyclase Toxin Of Bordetella Pertussis
In Presence Of C-Terminal Calmodulin
Length = 74
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READID 57
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 58 GDGQVNYEEFVQMM 71
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 34.3 bits (77), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READID 54
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 55 GDGQVNYEEFVQMM 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin Carboxy-
Terminal Domain
Length = 73
Score = 34.3 bits (77), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMI----READID 56
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 57 GDGQVNYEEFVQMM 70
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 83 MKEDAKGKS 91
Score = 34.3 bits (77), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 83 MKEDAKGKS 91
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 135 LVEMAR 140
+ E A+
Sbjct: 83 MKEDAK 88
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 83 MKEDAKGKS 91
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 83 MKEDAKGKS 91
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 135 LVEMAR 140
+ E A+
Sbjct: 83 MKEDAK 88
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 33.9 bits (76), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E+++R F + D D NG I +L ++ +L E LTD +V E+I ++A +D
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGE-----KLTDEEVDEMI----READID 55
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y+DF MM
Sbjct: 56 GDGQVNYEDFVQMM 69
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 33.9 bits (76), Expect = 0.89, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 66 KSDAVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 122
K A V+ +F +D D G + E FL +R TE + + + D DND +G
Sbjct: 37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGK 96
Query: 123 IDKGELAEMLRS 134
I E EM+ S
Sbjct: 97 IGADEFQEMVHS 108
Score = 33.9 bits (76), Expect = 0.89, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1209 KSDAVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1265
K A V+ +F +D D G + E FL +R TE + + + D DND +G
Sbjct: 37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGK 96
Query: 1266 IDKGELAEMLRS 1277
I E EM+ S
Sbjct: 97 IGADEFQEMVHS 108
Score = 33.9 bits (76), Expect = 0.89, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 1368 KSDAVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1424
K A V+ +F +D D G + E FL +R TE + + + D DND +G
Sbjct: 37 KMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGK 96
Query: 1425 IDKGELAEMLRS 1436
I E EM+ S
Sbjct: 97 IGADEFQEMVHS 108
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ +F DK+ DG++S EF + + FS T++ + F+ D D NG ++ E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 132 LRSLV 136
+ ++
Sbjct: 63 IEKML 67
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ +F DK+ DG++S EF + + FS T++ + F+ D D NG ++ E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 1275 LRSLV 1279
+ ++
Sbjct: 63 IEKML 67
Score = 33.9 bits (76), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 33/65 (50%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ +F DK+ DG++S EF + + FS T++ + F+ D D NG ++ E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSC 62
Query: 1434 LRSLV 1438
+ ++
Sbjct: 63 IEKML 67
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Score = 33.9 bits (76), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F++ DKDGDG I+ +E + + TE +L+ + + D D +G ID E M+
Sbjct: 16 FSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMM 72
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 23 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 82
F+EA++L F K G+ E G VMR +LG ++ M N VD D
Sbjct: 12 FKEAFSL-FD-KDGDGTITTKELG-TVMR----------SLGQNPTEAELQDMINEVDAD 58
Query: 83 GDGRISFQEFL 93
GDG I F EFL
Sbjct: 59 GDGTIDFPEFL 69
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1225
F+EA++L F K G+ E G VMR +LG ++ M N VD D
Sbjct: 12 FKEAFSL-FD-KDGDGTITTKELG-TVMR----------SLGQNPTEAELQDMINEVDAD 58
Query: 1226 GDGRISFQEFL 1236
GDG I F EFL
Sbjct: 59 GDGTIDFPEFL 69
Score = 30.8 bits (68), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 13/71 (18%)
Query: 1325 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1384
F+EA++L F K G+ E G VMR +LG ++ M N VD D
Sbjct: 12 FKEAFSL-FD-KDGDGTITTKELG-TVMR----------SLGQNPTEAELQDMINEVDAD 58
Query: 1385 GDGRISFQEFL 1395
GDG I F EFL
Sbjct: 59 GDGTIDFPEFL 69
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 32 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 80
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 32 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 80
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
DDETG++ + +L R A LG ++ M + D+DGDG +S QEFL
Sbjct: 32 DDETGKISFK-NLKRV--AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 80
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+R F + D+DG+G IS QE + E +L +I D D +G +D E +
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
Query: 132 L 132
L
Sbjct: 98 L 98
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+R F + D+DG+G IS QE + E +L +I D D +G +D E +
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
Query: 1275 L 1275
L
Sbjct: 98 L 98
Score = 33.5 bits (75), Expect = 1.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+R F + D+DG+G IS QE + E +L +I D D +G +D E +
Sbjct: 38 IREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
Query: 1434 L 1434
L
Sbjct: 98 L 98
Score = 30.8 bits (68), Expect = 8.5, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+++R F + D D NG I K EL +RSL M L + + +D M D +D +
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVEL--EVIIQRLD-MDGDGQVDFE 92
Query: 1468 DFLT 1471
+F+T
Sbjct: 93 EFVT 96
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 32.7 bits (73), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 135 LVEMAR 140
+ E A+
Sbjct: 86 MKEDAK 91
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle
Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle
Troponin C
Length = 162
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 32.7 bits (73), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 135 LVEMAR 140
+ E A+
Sbjct: 86 MKEDAK 91
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle
Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight Muscle
Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight Muscle
Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight Muscle
Quick Frozen After A Length Step
Length = 159
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 83 MKEDAKGKS 91
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 83 MKEDAKGKS 91
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 82
Query: 135 LVEMAR 140
+ E A+
Sbjct: 83 MKEDAK 88
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E++L F + D D NG+I EL ++ +L E LTD +V E+I ++A +D
Sbjct: 6 SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE-----KLTDDEVDEMI----READID 56
Query: 1466 SKDFLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 57 GDGHINYEEFVRMM 70
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal
Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 135 LVEMAR 140
+ E A+
Sbjct: 86 MKEDAK 91
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1278 LVEMARTTS 1286
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1437 LVEMARTTS 1445
+ E A+ S
Sbjct: 86 MKEDAKGKS 94
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 135 LVEMAR 140
+ E A+
Sbjct: 86 MKEDAK 91
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 131
+ F++ D DG G IS + + + + T+++L I + D D +G ID E L M
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 132 LRSLVEMA 139
+R + E A
Sbjct: 83 VRQMKEDA 90
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 1274
+ F++ D DG G IS + + + + T+++L I + D D +G ID E L M
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 1275 LRSLVEMA 1282
+R + E A
Sbjct: 83 VRQMKEDA 90
Score = 33.5 bits (75), Expect = 1.3, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 1433
+ F++ D DG G IS + + + + T+++L I + D D +G ID E L M
Sbjct: 23 KAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 82
Query: 1434 LRSLVEMA 1441
+R + E A
Sbjct: 83 VRQMKEDA 90
>pdb|1U5I|A Chain A, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
Length = 700
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 98
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1241
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1400
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
>pdb|1DF0|A Chain A, Crystal Structure Of M-Calpain
Length = 700
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 98
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1241
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1400
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
>pdb|3DF0|A Chain A, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|A Chain A, Structure Of M-Calpain In Complex With Calpastatin
Length = 714
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 98
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1241
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1400
D E ++T L R A +KSD + ++M +++D+DG G++ +EF +L
Sbjct: 545 DAEISAFELQTILRRV-LAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEF---YIL 600
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 601 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 631
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 135 LVEMA 139
+ E A
Sbjct: 86 MKEDA 90
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1278 LVEMA 1282
+ E A
Sbjct: 86 MKEDA 90
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 85
Query: 1437 LVEMA 1441
+ E A
Sbjct: 86 MKEDA 90
>pdb|1KFX|L Chain L, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|L Chain L, Crystal Structure Of Human M-Calpain Form Ii
Length = 699
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 98
D E ++T L R A +KSD + ++M +++D DG G++ +EF +L
Sbjct: 544 DAEISAFELQTILRRV-LAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEF---YIL 599
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 600 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 630
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1241
D E ++T L R A +KSD + ++M +++D DG G++ +EF +L
Sbjct: 544 DAEISAFELQTILRRV-LAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEF---YIL 599
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 600 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 630
Score = 33.1 bits (74), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFV---RMMFNIVDKDGDGRISFQEFLDTVVL 1400
D E ++T L R A +KSD + ++M +++D DG G++ +EF +L
Sbjct: 544 DAEISAFELQTILRRV-LAKRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEF---YIL 599
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+++ K + I+ D DR+G ++ E+ + L
Sbjct: 600 WTKIQ---KYQKIYREIDVDRSGTMNSYEMRKAL 630
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 32.7 bits (73), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 10/100 (10%)
Query: 1381 VDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439
+ + +G+++F EF + R TE+++R F + D D +G I EL ++ +L E
Sbjct: 55 AENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGE 114
Query: 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+TD ++ E+I ++A D + Y++F M+
Sbjct: 115 -----KVTDEEIDEMI----READFDGDGMINYEEFVWMI 145
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L + E +S L ++ DA V + +D++GDG + FQEF+
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L + E +S L ++ DA V + +D++GDG + FQEF+
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
Score = 32.7 bits (73), Expect = 2.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L + E +S L ++ DA V + +D++GDG + FQEF+
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 1145 RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS 1204
+ L A+T +R Q +E FFR GL+ G++ + + + +L+ A+ A
Sbjct: 52 KNLGATPAQT-QRHQDCVEAFFRGC-----GLEYGKETKFPEF---LEGWKNLANADLAK 102
Query: 1205 ALGMKSDAVFVR----MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN 1260
+++ +R +F+I DKDG G I+ E+ + +E+ F CD
Sbjct: 103 W--ARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDL 160
Query: 1261 DRNGVIDKGEL 1271
D +G +D E+
Sbjct: 161 DNSGELDVDEM 171
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 1304 RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS 1363
+ L A+T +R Q +E FFR GL+ G++ + + + +L+ A+ A
Sbjct: 52 KNLGATPAQT-QRHQDCVEAFFRGC-----GLEYGKETKFPEF---LEGWKNLANADLAK 102
Query: 1364 ALGMKSDAVFVR----MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN 1419
+++ +R +F+I DKDG G I+ E+ + +E+ F CD
Sbjct: 103 W--ARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDL 160
Query: 1420 DRNGVIDKGEL 1430
D +G +D E+
Sbjct: 161 DNSGELDVDEM 171
Score = 32.0 bits (71), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+F+I DKDG G I+ E+ + +E+ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEM 171
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 32.3 bits (72), Expect = 2.9, Method: Composition-based stats.
Identities = 36/147 (24%), Positives = 59/147 (40%), Gaps = 15/147 (10%)
Query: 1339 EKRRRDDETGEVVMRTSLSR-AEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDT 1397
E RD ET E R S + LG++ +R + + D G+G I F F
Sbjct: 16 ETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKII 75
Query: 1398 VVLF-----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVT 1452
F + + +LR F + D + NG I + E+ L E+ T S +
Sbjct: 76 GARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREI---LAELDETLS------S 126
Query: 1453 ELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
E +D M + D + +++F +M
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVM 153
Score = 31.6 bits (70), Expect = 5.2, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 7/122 (5%)
Query: 1180 EKRRRDDETGEVVMRTSLSR-AEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDT 1238
E RD ET E R S + LG++ +R + + D G+G I F F
Sbjct: 16 ETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKII 75
Query: 1239 VVLF-----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVT 1293
F + + +LR F + D + NG I + E+L L E + L D+ +
Sbjct: 76 GARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDL-DAMID 134
Query: 1294 EL 1295
E+
Sbjct: 135 EI 136
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 134
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 15 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 74
Query: 135 L 135
+
Sbjct: 75 M 75
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1277
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 15 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 74
Query: 1278 L 1278
+
Sbjct: 75 M 75
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEMLRS 1436
F++ D DG G IS +E + + + T+++L I + D D +G ID E L M+R
Sbjct: 15 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ 74
Query: 1437 L 1437
+
Sbjct: 75 M 75
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 1228 GRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1287
G ++ F V L +G T+ +++ +F++ D D++G I++ EL +L+ R L
Sbjct: 22 GTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR--DL 77
Query: 1288 TDSQVTELI 1296
D++ L+
Sbjct: 78 NDTETKALL 86
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 1387 GRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1446
G ++ F V L +G T+ +++ +F++ D D++G I++ EL +L+ R L
Sbjct: 22 GTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR--DL 77
Query: 1447 TDSQVTELI 1455
D++ L+
Sbjct: 78 NDTETKALL 86
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+++ F D+DGDG I+ E + + +++L + D D++G ++ E A M
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Query: 132 L 132
L
Sbjct: 68 L 68
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+++ F D+DGDG I+ E + + +++L + D D++G ++ E A M
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Query: 1275 L 1275
L
Sbjct: 68 L 68
Score = 32.0 bits (71), Expect = 3.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+++ F D+DGDG I+ E + + +++L + D D++G ++ E A M
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
Query: 1434 L 1434
L
Sbjct: 68 L 68
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 32.0 bits (71), Expect = 3.4, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 131
+ F++ D DG G IS +E + + + T+ +L I D D +G ID E L M
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMM 82
Query: 132 LRSLVEMA 139
+R + E A
Sbjct: 83 VRQMKEDA 90
Score = 32.0 bits (71), Expect = 3.4, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 1274
+ F++ D DG G IS +E + + + T+ +L I D D +G ID E L M
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMM 82
Query: 1275 LRSLVEMA 1282
+R + E A
Sbjct: 83 VRQMKEDA 90
Score = 32.0 bits (71), Expect = 3.4, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 1433
+ F++ D DG G IS +E + + + T+ +L I D D +G ID E L M
Sbjct: 23 KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMM 82
Query: 1434 LRSLVEMA 1441
+R + E A
Sbjct: 83 VRQMKEDA 90
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
DDETG++ + +L R A LG ++ + D+DGDG +S QEFL
Sbjct: 115 DDETGKISFK-NLKRV--AKELGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
DDETG++ + +L R A LG ++ + D+DGDG +S QEFL
Sbjct: 115 DDETGKISFK-NLKRV--AKELGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
Score = 32.0 bits (71), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
DDETG++ + +L R A LG ++ + D+DGDG +S QEFL
Sbjct: 115 DDETGKISFK-NLKRV--AKELGENLTDEELQEXIDEADRDGDGEVSEQEFL 163
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R+M +++D+D G + F EF + + + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISLDTDRSGTVDPQELQKA 128
Query: 132 LRSL 135
L ++
Sbjct: 129 LTTM 132
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
R+M +++D+D G + F EF + + + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISLDTDRSGTVDPQELQKA 128
Query: 1275 LRSL 1278
L ++
Sbjct: 129 LTTM 132
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R+M +++D+D G + F EF + + + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISLDTDRSGTVDPQELQKA 128
Query: 1434 LRSL 1437
L ++
Sbjct: 129 LTTM 132
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 31.6 bits (70), Expect = 4.7, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 74 MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
++ + +D DG G+I + EF+ L + ++ + F + D D +G I ELA +L
Sbjct: 91 LLLDQIDSDGSGKIDYTEFI-AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHIL 148
Score = 31.6 bits (70), Expect = 4.7, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 1217 MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
++ + +D DG G+I + EF+ L + ++ + F + D D +G I ELA +L
Sbjct: 91 LLLDQIDSDGSGKIDYTEFI-AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHIL 148
Score = 30.4 bits (67), Expect = 9.3, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 31/181 (17%)
Query: 1230 ISFQEFLDTVVLF-SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML-RSLVEMARTTSL 1287
+ FQ+ T++ S + +KL+ F + D D G I K +L + L + +++ L
Sbjct: 32 LKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDL 91
Query: 1288 TDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDET 1347
Q+ DG + +A A R++ KKL + + + D
Sbjct: 92 LLDQIDS--DGSGKIDYTEFIAAALDRKQLSKKLIYCAFRVFDV-------------DND 136
Query: 1348 GEVVMRTSLSRAEFASAL--GMKS------DAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399
GE+ + AE A L G K D V+ M VDK+ DG+I F EF + +
Sbjct: 137 GEI------TTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Query: 1400 L 1400
L
Sbjct: 191 L 191
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d Mutant
Length = 109
Score = 31.6 bits (70), Expect = 4.7, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1450
+ D ++ +F + D D++G ID+ EL +L+ AR S +++
Sbjct: 39 SADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETK 83
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
ALG + ++ M + +DKDG G I F+EFL
Sbjct: 58 ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
ALG + ++ M + +DKDG G I F+EFL
Sbjct: 58 ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Score = 31.2 bits (69), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
ALG + ++ M + +DKDG G I F+EFL
Sbjct: 58 ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 39 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 98
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 14 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ +F D D +G+IDK EL + L
Sbjct: 73 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 100
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1182 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 14 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ +F D D +G+IDK EL + L
Sbjct: 73 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 100
Score = 31.2 bits (69), Expect = 5.6, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1400
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 14 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ +F D D +G+IDK EL + L
Sbjct: 73 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 100
>pdb|1EJ3|A Chain A, Crystal Structure Of Aequorin
pdb|1EJ3|B Chain B, Crystal Structure Of Aequorin
pdb|1UHI|A Chain A, Crystal Structure Of I-aequorin
pdb|1UHI|B Chain B, Crystal Structure Of I-aequorin
pdb|1UHK|A Chain A, Crystal Structure Of N-Aequorin
pdb|1UHK|B Chain B, Crystal Structure Of N-Aequorin
Length = 191
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 66 KSDAVFVRM----MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 121
K++ +R+ +F+IVDKD +G I+ E+ + + F +CD D +G
Sbjct: 101 KNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 160
Query: 122 VIDKGEL 128
+D E+
Sbjct: 161 QLDVDEM 167
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 1209 KSDAVFVRM----MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1264
K++ +R+ +F+IVDKD +G I+ E+ + + F +CD D +G
Sbjct: 101 KNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 160
Query: 1265 VIDKGEL 1271
+D E+
Sbjct: 161 QLDVDEM 167
Score = 31.2 bits (69), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 1368 KSDAVFVRM----MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1423
K++ +R+ +F+IVDKD +G I+ E+ + + F +CD D +G
Sbjct: 101 KNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESG 160
Query: 1424 VIDKGEL 1430
+D E+
Sbjct: 161 QLDVDEM 167
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 31.2 bits (69), Expect = 5.9, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 39 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 98
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 14 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ +F D D +G+IDK EL + L
Sbjct: 73 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 100
Score = 31.2 bits (69), Expect = 5.9, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1182 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 14 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ +F D D +G+IDK EL + L
Sbjct: 73 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 100
Score = 31.2 bits (69), Expect = 5.9, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1400
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 14 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ +F D D +G+IDK EL + L
Sbjct: 73 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 100
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 39 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 98
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 10 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 68
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ +F D D +G+IDK EL + L
Sbjct: 69 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 96
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1182 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 10 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 68
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ +F D D +G+IDK EL + L
Sbjct: 69 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 96
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1400
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 10 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 68
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ +F D D +G+IDK EL + L
Sbjct: 69 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 96
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 39 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 98
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 32 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 90
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ +F D D +G+IDK EL + L
Sbjct: 91 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 118
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1182 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 32 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 90
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ +F D D +G+IDK EL + L
Sbjct: 91 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 118
Score = 31.2 bits (69), Expect = 6.0, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1400
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 32 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 90
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ +F D D +G+IDK EL + L
Sbjct: 91 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 118
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 31.2 bits (69), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+KL F + D D++ I + EL ++LR +V +++D Q+ + D Q+A D
Sbjct: 113 NKLHFAFRLYDLDKDDKISRDELLQVLRMMV----GVNISDEQLGSIADRTIQEADQDGD 168
Query: 1468 DFLTYQDF 1475
+++ +F
Sbjct: 169 SAISFTEF 176
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 39 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 98
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 11 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ +F D D +G+IDK EL + L
Sbjct: 70 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 97
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1182 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 11 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ +F D D +G+IDK EL + L
Sbjct: 70 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 97
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1400
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 11 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ +F D D +G+IDK EL + L
Sbjct: 70 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 97
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 39 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 98
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 11 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 99 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ +F D D +G+IDK EL + L
Sbjct: 70 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 97
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1182 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 11 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ +F D D +G+IDK EL + L
Sbjct: 70 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 97
Score = 31.2 bits (69), Expect = 6.2, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1400
+R D + V+ T L +A ++ + V VR + ++ D++ ++F EF
Sbjct: 11 QRVDKDRSGVISDTELQQA-LSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 69
Query: 1401 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ +F D D +G+IDK EL + L
Sbjct: 70 ITDWQN------VFRTYDRDNSGMIDKNELKQAL 97
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R+M +++D+D G + F EF + + + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 132 LRSL 135
L ++
Sbjct: 129 LTTM 132
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
R+M +++D+D G + F EF + + + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 1275 LRSL 1278
L ++
Sbjct: 129 LTTM 132
Score = 31.2 bits (69), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R+M +++D+D G + F EF + + + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 1434 LRSL 1437
L ++
Sbjct: 129 LTTM 132
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor Calcineurin
B Homologous Protein 1
Length = 195
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+KL F + D D++ I + EL ++LR +V +++D Q+ + D Q+A D
Sbjct: 113 NKLHFAFRLYDLDKDEKISRDELLQVLRMMV----GVNISDEQLGSIADRTIQEADQDGD 168
Query: 1468 DFLTYQDF 1475
+++ +F
Sbjct: 169 SAISFTEF 176
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 31.2 bits (69), Expect = 6.8, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 12/106 (11%)
Query: 49 VMRTSLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTE 105
+++ L++ E +D F +R F++VDK+ DGR++ +E + + L + +
Sbjct: 74 IVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKL 133
Query: 106 DKLR--------IIFDMCDNDRNGVIDKGEL-AEMLRSLVEMARTS 142
K++ +I + D G I+ +L A +L+S E A S
Sbjct: 134 SKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEAAARS 179
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 56 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 111
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 391 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 446
Query: 112 FDMCDNDRNGVIDKGELA 129
F M D+D +G I ELA
Sbjct: 447 FRMFDSDNSGKISSTELA 464
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1199 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 1254
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 391 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 446
Query: 1255 FDMCDNDRNGVIDKGELA 1272
F M D+D +G I ELA
Sbjct: 447 FRMFDSDNSGKISSTELA 464
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 1413
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 391 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 446
Query: 1414 FDMCDNDRNGVIDKGELA 1431
F M D+D +G I ELA
Sbjct: 447 FRMFDSDNSGKISSTELA 464
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 56 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 111
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 392 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 447
Query: 112 FDMCDNDRNGVIDKGELA 129
F M D+D +G I ELA
Sbjct: 448 FRMFDSDNSGKISSTELA 465
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1199 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 1254
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 392 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 447
Query: 1255 FDMCDNDRNGVIDKGELA 1272
F M D+D +G I ELA
Sbjct: 448 FRMFDSDNSGKISSTELA 465
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 1413
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 392 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 447
Query: 1414 FDMCDNDRNGVIDKGELA 1431
F M D+D +G I ELA
Sbjct: 448 FRMFDSDNSGKISSTELA 465
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 31.2 bits (69), Expect = 7.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L + E + L + DA V + +D+DGDG + FQE++
Sbjct: 36 LLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDFQEYV 75
Score = 31.2 bits (69), Expect = 7.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L + E + L + DA V + +D+DGDG + FQE++
Sbjct: 36 LLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDFQEYV 75
Score = 31.2 bits (69), Expect = 7.0, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L + E + L + DA V + +D+DGDG + FQE++
Sbjct: 36 LLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDFQEYV 75
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+F+I DKDG G IS E+ + +++ F CD D +G +D E+
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEM 174
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+F+I DKDG G IS E+ + +++ F CD D +G +D E+
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEM 174
Score = 30.8 bits (68), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+F+I DKDG G IS E+ + +++ F CD D +G +D E+
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEM 174
>pdb|1SL8|A Chain A, Calcium-Loaded Apo-Aequorin From Aequorea Victoria
Length = 191
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+F+I+DKD +G IS E+ + + F +CD D +G +D E+
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+F+I+DKD +G IS E+ + + F +CD D +G +D E+
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167
Score = 30.8 bits (68), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+F+I+DKD +G IS E+ + + F +CD D +G +D E+
Sbjct: 114 LFDIIDKDQNGAISLDEWKAYTKSAGIIQSSEDCEETFRVCDIDESGQLDVDEM 167
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 56 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 111
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 368 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 423
Query: 112 FDMCDNDRNGVIDKGELA 129
F M D+D +G I ELA
Sbjct: 424 FRMFDSDNSGKISSTELA 441
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1199 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 1254
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 368 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 423
Query: 1255 FDMCDNDRNGVIDKGELA 1272
F M D+D +G I ELA
Sbjct: 424 FRMFDSDNSGKISSTELA 441
Score = 30.8 bits (68), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF----LDTVVLFSRGHTEDKLRII 1413
+ + AS L + V + + VD D +G I + EF +D L SR ++L
Sbjct: 368 KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSR----ERLERA 423
Query: 1414 FDMCDNDRNGVIDKGELA 1431
F M D+D +G I ELA
Sbjct: 424 FRMFDSDNSGKISSTELA 441
Score = 30.4 bits (67), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 35/168 (20%)
Query: 1241 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM-ARTTSLTDS--------Q 1291
L S+ T++ L IF D + +G +D+ EL E + L+ M + S+ D+ Q
Sbjct: 328 LTSQDETKE-LTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQ 386
Query: 1292 VTELID----GMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDET 1347
V + +D G + + +A +++LE FR + D +
Sbjct: 387 VLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDS--------------DNS 432
Query: 1348 GEVVMRTSLSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 1394
G++ S E A+ G+ D+ + + + VDK+ DG + F EF
Sbjct: 433 GKI------SSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 30.8 bits (68), Expect = 7.7, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFL------DTVVLFSRG--HTEDKLRIIFDMCDNDRN 120
A + +M + D + DG++ E + +L +G + F++ D D N
Sbjct: 146 AEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGN 205
Query: 121 GVIDKGELAEMLRSLVE 137
G ID+ EL +L+ L E
Sbjct: 206 GYIDENELDALLKDLCE 222
Score = 30.8 bits (68), Expect = 7.7, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFL------DTVVLFSRG--HTEDKLRIIFDMCDNDRN 1263
A + +M + D + DG++ E + +L +G + F++ D D N
Sbjct: 146 AEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGN 205
Query: 1264 GVIDKGELAEMLRSLVE 1280
G ID+ EL +L+ L E
Sbjct: 206 GYIDENELDALLKDLCE 222
Score = 30.8 bits (68), Expect = 7.7, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFL------DTVVLFSRG--HTEDKLRIIFDMCDNDRN 1422
A + +M + D + DG++ E + +L +G + F++ D D N
Sbjct: 146 AEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGN 205
Query: 1423 GVIDKGELAEMLRSLVE 1439
G ID+ EL +L+ L E
Sbjct: 206 GYIDENELDALLKDLCE 222
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEM 171
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLD 94
V+ M +D DGDG ISFQEF D
Sbjct: 46 VKHMMAEIDTDGDGFISFQEFTD 68
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLD 1237
V+ M +D DGDG ISFQEF D
Sbjct: 46 VKHMMAEIDTDGDGFISFQEFTD 68
Score = 30.8 bits (68), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 16/23 (69%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLD 1396
V+ M +D DGDG ISFQEF D
Sbjct: 46 VKHMMAEIDTDGDGFISFQEFTD 68
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Score = 30.8 bits (68), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+F+I DKDG G I+ E+ + +++ F CD D +G +D E+
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 30.8 bits (68), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 1402 SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-DGMFQ 1460
S+G TE++L +F M D + +G ID EL ML++ E ++T+ + EL+ DG
Sbjct: 4 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGE-----TITEDDIEELMKDGDKN 58
Query: 1461 DAG-LDSKDFLTY 1472
+ G +D +FL +
Sbjct: 59 NDGRIDYDEFLEF 71
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin C
Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin C
Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 30.8 bits (68), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 7/73 (9%)
Query: 1402 SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-DGMFQ 1460
S+G TE++L +F M D + +G ID EL ML++ E ++T+ + EL+ DG
Sbjct: 9 SKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGE-----TITEDDIEELMKDGDKN 63
Query: 1461 DAG-LDSKDFLTY 1472
+ G +D +FL +
Sbjct: 64 NDGRIDYDEFLEF 76
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 30.8 bits (68), Expect = 9.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F + D +GDG I F EF ++ G T+ ++ D D NGVID E +++
Sbjct: 14 FKVFDANGDGVIDFDEF--KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Query: 133 R 133
+
Sbjct: 72 K 72
Score = 30.8 bits (68), Expect = 9.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F + D +GDG I F EF ++ G T+ ++ D D NGVID E +++
Sbjct: 14 FKVFDANGDGVIDFDEF--KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Query: 1276 R 1276
+
Sbjct: 72 K 72
Score = 30.8 bits (68), Expect = 9.1, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
F + D +GDG I F EF ++ G T+ ++ D D NGVID E +++
Sbjct: 14 FKVFDANGDGVIDFDEF--KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Query: 1435 R 1435
+
Sbjct: 72 K 72
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 30.4 bits (67), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 1217 MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
++ + +D DG G I + EFL + R ++ + F + D D +G I ELA +L
Sbjct: 94 LLLDQIDSDGSGNIDYTEFL-AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLF 152
Query: 1277 SLVEMARTTSLTDSQVTELI 1296
+ + T +QV ++I
Sbjct: 153 NGNKRGNITERDVNQVKKMI 172
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,213,101
Number of Sequences: 62578
Number of extensions: 2524939
Number of successful extensions: 8336
Number of sequences better than 100.0: 244
Number of HSP's better than 100.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 6257
Number of HSP's gapped (non-prelim): 1629
length of query: 2014
length of database: 14,973,337
effective HSP length: 113
effective length of query: 1901
effective length of database: 7,902,023
effective search space: 15021745723
effective search space used: 15021745723
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)