Query psy5584
Match_columns 2014
No_of_seqs 1390 out of 7043
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 21:18:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5584.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5584hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q9k_A Lactoperoxidase, LPO; b 100.0 9E-116 3E-120 1117.9 28.7 533 337-975 19-588 (595)
2 1d2v_C Myeloperoxidase; heme-p 100.0 5E-102 2E-106 973.9 33.0 438 436-975 6-461 (466)
3 3nt1_A Prostaglandin-endoperox 100.0 1E-85 3.5E-90 837.9 18.3 432 336-949 102-554 (587)
4 1q4g_A Prostaglandin G/H synth 100.0 2.4E-84 8.1E-89 829.8 22.4 429 349-948 103-553 (553)
5 1d2v_C Myeloperoxidase; heme-p 100.0 5.6E-33 1.9E-37 348.8 8.2 235 18-282 184-464 (466)
6 3q9k_A Lactoperoxidase, LPO; b 100.0 2.4E-33 8.1E-38 358.7 4.0 223 41-283 328-592 (595)
7 4eh1_A Flavohemoprotein; struc 99.9 1.9E-26 6.6E-31 270.9 21.9 223 1730-2014 2-236 (243)
8 1tvc_A Methane monooxygenase c 99.9 3.3E-26 1.1E-30 270.1 20.4 227 1731-2014 10-245 (250)
9 1qfj_A Protein (flavin reducta 99.9 3.8E-26 1.3E-30 266.4 20.6 224 1732-2014 3-230 (232)
10 2r6h_A NADH:ubiquinone oxidore 99.9 3.2E-25 1.1E-29 267.6 24.0 234 1730-2014 8-290 (290)
11 4g1v_A Flavohemoglobin; three 99.9 4.6E-25 1.6E-29 278.0 24.7 223 1728-2014 146-391 (399)
12 4fk8_A Ferredoxin--NADP reduct 99.9 1.1E-25 3.7E-30 268.9 17.4 235 1729-2013 17-268 (271)
13 3jqq_A Ferredoxin NADP reducta 99.9 2.1E-25 7.3E-30 271.4 19.1 240 1731-2013 15-316 (316)
14 1krh_A Benzoate 1,2-dioxygenas 99.9 5.3E-25 1.8E-29 271.4 21.4 225 1730-2014 107-336 (338)
15 1fdr_A Flavodoxin reductase; f 99.9 5.9E-24 2E-28 250.5 25.7 232 1731-2013 4-247 (248)
16 2eix_A NADH-cytochrome B5 redu 99.9 3.5E-24 1.2E-28 251.6 22.7 225 1731-2009 11-241 (243)
17 3lo8_A Ferredoxin--NADP reduct 99.9 3.5E-24 1.2E-28 261.0 23.2 224 1731-2000 28-288 (311)
18 1gvh_A Flavohemoprotein; oxido 99.9 3.4E-24 1.2E-28 270.0 22.7 235 1729-2014 150-391 (396)
19 1cqx_A Flavohemoprotein; globi 99.9 8.1E-24 2.8E-28 267.3 24.8 234 1729-2014 152-397 (403)
20 3vo2_A Putative uncharacterize 99.9 1.5E-23 5E-28 255.1 25.5 227 1731-2002 33-289 (310)
21 2qdx_A Ferredoxin reductase; o 99.9 4.5E-24 1.5E-28 252.8 19.8 228 1731-2013 3-253 (257)
22 2bgi_A Ferredoxin-NADP(H) redu 99.9 1.9E-23 6.5E-28 249.4 23.9 231 1732-2013 17-266 (272)
23 1umk_A B5R, NADH-cytochrome B5 99.9 3.8E-23 1.3E-27 247.4 19.9 226 1731-2009 16-273 (275)
24 2pia_A Phthalate dioxygenase r 99.9 8.7E-23 3E-27 249.4 22.2 212 1731-2014 8-226 (321)
25 2bmw_A Ferredoxin--NADP reduct 99.9 4E-22 1.4E-26 242.0 25.5 231 1731-2003 21-284 (304)
26 1fnb_A Ferredoxin-NADP+ reduct 99.9 6.9E-22 2.4E-26 241.0 26.7 227 1731-2002 37-293 (314)
27 2cnd_A NADH-dependent nitrate 99.9 3.3E-22 1.1E-26 238.7 20.1 222 1731-1997 12-259 (270)
28 2b5o_A FNR, ferredoxin--NADP r 99.9 8.5E-22 2.9E-26 247.2 24.2 226 1731-2000 122-379 (402)
29 2rc5_A Ferredoxin-NADP reducta 99.9 6.2E-22 2.1E-26 241.5 20.0 229 1731-2013 21-299 (314)
30 3a1f_A Cytochrome B-245 heavy 99.9 3E-22 1E-26 225.0 14.8 179 1824-2013 2-186 (186)
31 1ep3_B Dihydroorotate dehydrog 99.9 7.9E-22 2.7E-26 234.1 18.4 212 1732-2013 6-223 (262)
32 1qxp_A MU-like calpain; M-calp 99.9 7.1E-24 2.4E-28 293.2 0.5 341 1070-1484 459-870 (900)
33 1q4g_A Prostaglandin G/H synth 99.8 2E-22 6.8E-27 258.3 4.3 180 47-251 341-552 (553)
34 3nt1_A Prostaglandin-endoperox 99.8 7.7E-23 2.6E-27 261.0 0.3 181 47-253 341-554 (587)
35 2be4_A Hypothetical protein LO 99.8 2.2E-20 7.6E-25 222.4 18.2 231 1210-1484 8-271 (272)
36 1ij5_A Plasmodial specific LAV 99.8 6.3E-21 2.1E-25 232.6 8.5 195 1213-1482 122-319 (323)
37 2f33_A Calbindin; EF-hand, Ca2 99.8 6E-20 2.1E-24 217.5 15.5 213 1166-1482 18-261 (263)
38 2gpj_A Siderophore-interacting 99.8 2.1E-18 7.3E-23 203.0 18.2 209 1731-2013 8-226 (252)
39 3nyv_A Calmodulin-domain prote 99.8 7.6E-19 2.6E-23 227.6 14.8 245 1112-1482 225-481 (484)
40 3q5i_A Protein kinase; CDPK, m 99.8 1E-18 3.5E-23 227.5 14.7 250 1112-1483 245-499 (504)
41 3mwu_A Calmodulin-domain prote 99.8 3.2E-19 1.1E-23 231.2 7.9 257 1112-1482 220-482 (486)
42 3lij_A Calcium/calmodulin depe 99.7 1.1E-18 3.7E-23 226.7 10.6 251 1112-1483 235-490 (494)
43 2d8n_A Recoverin; structural g 99.7 2.6E-17 9E-22 187.8 16.3 182 1221-1491 7-195 (207)
44 3bow_A Calpain-2 catalytic sub 99.7 6.9E-18 2.3E-22 226.3 10.6 230 1070-1439 458-701 (714)
45 1y1x_A Leishmania major homolo 99.7 1.4E-16 4.7E-21 179.6 19.3 162 1212-1481 26-189 (191)
46 2lmt_A Calmodulin-related prot 99.7 4.7E-17 1.6E-21 175.5 14.8 108 1365-1481 39-147 (148)
47 2znd_A Programmed cell death p 99.7 1.8E-16 6E-21 175.3 19.6 163 1211-1481 5-170 (172)
48 3sjs_A URE3-BP sequence specif 99.7 2E-16 6.7E-21 182.6 19.1 170 1193-1481 41-217 (220)
49 2ehb_A Calcineurin B-like prot 99.7 1.5E-16 5.2E-21 181.4 17.9 178 1224-1492 11-194 (207)
50 3u0k_A Rcamp; fluorescent prot 99.7 9.4E-17 3.2E-21 194.3 15.2 108 1365-1481 331-439 (440)
51 2obh_A Centrin-2; DNA repair c 99.7 8.1E-17 2.8E-21 172.5 13.1 136 1249-1480 6-142 (143)
52 1ddg_A Sulfite reductase (NADP 99.7 6.2E-17 2.1E-21 200.4 11.6 185 1758-1999 145-346 (374)
53 2lhi_A Calmodulin, serine/thre 99.7 5.4E-17 1.8E-21 180.4 9.2 137 1249-1482 11-148 (176)
54 1s6c_A KV4 potassium channel-i 99.7 3.9E-16 1.3E-20 174.2 14.7 172 1231-1490 2-177 (183)
55 3i5g_C Myosin catalytic light 99.7 2.1E-16 7E-21 172.7 11.5 109 1365-1483 40-153 (159)
56 1exr_A Calmodulin; high resolu 99.7 6.3E-16 2.2E-20 166.3 14.9 108 1365-1481 39-147 (148)
57 2be4_A Hypothetical protein LO 99.7 6.3E-16 2.1E-20 183.8 16.3 208 1166-1435 13-267 (272)
58 3qrx_A Centrin; calcium-bindin 99.7 4.6E-16 1.6E-20 171.1 13.9 110 1365-1483 57-167 (169)
59 1y1x_A Leishmania major homolo 99.6 3.7E-15 1.3E-19 167.9 21.2 156 1166-1436 29-189 (191)
60 1s1e_A KV channel interacting 99.6 6.1E-16 2.1E-20 179.0 14.4 180 1227-1494 31-214 (224)
61 2jnf_A Troponin C; stretch act 99.6 8.7E-16 3E-20 166.8 14.4 110 1365-1483 43-157 (158)
62 3sjs_A URE3-BP sequence specif 99.6 2.4E-15 8.2E-20 173.5 18.7 165 1152-1437 44-218 (220)
63 2l2e_A Calcium-binding protein 99.6 1.5E-15 5E-20 170.7 16.4 174 1225-1490 3-184 (190)
64 2bl0_C Myosin regulatory light 99.6 8.3E-16 2.8E-20 163.8 13.7 135 1249-1480 6-141 (142)
65 1alv_A Calpain, S-camld; calci 99.6 2.3E-15 8E-20 166.5 17.0 64 1212-1276 3-74 (173)
66 1bjf_A Neurocalcin delta; calc 99.6 2.3E-15 7.8E-20 169.4 17.1 173 1195-1470 6-193 (193)
67 2znd_A Programmed cell death p 99.6 6.4E-15 2.2E-19 162.7 20.2 155 1166-1435 9-169 (172)
68 1m45_A MLC1P, myosin light cha 99.6 4.7E-16 1.6E-20 167.0 10.4 108 1365-1481 33-147 (148)
69 2zfd_A Calcineurin B-like prot 99.6 2.8E-15 9.6E-20 173.7 17.6 120 1372-1492 85-205 (226)
70 3fwb_A Cell division control p 99.6 2.8E-15 9.4E-20 163.1 16.4 108 1365-1481 52-160 (161)
71 3ox6_A Calcium-binding protein 99.6 2E-15 6.9E-20 162.5 14.0 107 1365-1480 40-152 (153)
72 3pm8_A PFCDPK2, calcium-depend 99.6 3.6E-16 1.2E-20 177.1 8.5 109 1367-1482 88-196 (197)
73 1dtl_A Cardiac troponin C; hel 99.6 2.1E-15 7E-20 164.3 14.0 108 1365-1481 48-159 (161)
74 4ds7_A Calmodulin, CAM; protei 99.6 2.9E-15 9.9E-20 160.2 14.5 106 1365-1480 40-146 (147)
75 3k21_A PFCDPK3, calcium-depend 99.6 2.5E-15 8.5E-20 169.4 14.6 108 1367-1480 83-190 (191)
76 2bec_A Calcineurin B homologou 99.6 4.7E-16 1.6E-20 176.7 8.1 104 1374-1482 63-184 (202)
77 1g8i_A Frequenin, neuronal cal 99.6 5.5E-15 1.9E-19 165.8 16.4 173 1227-1491 5-185 (190)
78 3i5g_B Myosin regulatory light 99.6 1.3E-15 4.6E-20 165.1 10.5 105 1365-1483 45-150 (153)
79 1wdc_C Scallop myosin; calcium 99.6 2.4E-15 8.3E-20 163.0 12.4 110 1365-1484 40-153 (156)
80 1gjy_A Sorcin, CP-22, V19; cal 99.6 1.4E-14 4.8E-19 159.2 18.5 61 1217-1277 5-70 (167)
81 1alv_A Calpain, S-camld; calci 99.6 6.1E-15 2.1E-19 163.2 15.6 141 1195-1436 18-169 (173)
82 2i7a_A Calpain 13; calcium-dep 99.6 8.5E-15 2.9E-19 162.2 16.6 143 1195-1434 19-171 (174)
83 2f2o_A Calmodulin fused with c 99.6 5.1E-15 1.7E-19 164.4 14.6 140 1248-1483 10-150 (179)
84 2d8n_A Recoverin; structural g 99.6 1.3E-14 4.4E-19 165.4 18.0 174 1195-1470 14-204 (207)
85 2bl0_B Myosin regulatory light 99.6 3.3E-15 1.1E-19 159.5 12.2 138 1246-1482 2-141 (145)
86 1jba_A GCAP-2, protein (guanyl 99.6 6.6E-15 2.3E-19 167.5 15.1 122 1367-1492 54-187 (204)
87 1bjf_A Neurocalcin delta; calc 99.6 1.3E-14 4.3E-19 163.3 17.1 175 1226-1489 4-183 (193)
88 1k94_A Grancalcin; penta-EF-ha 99.6 1.4E-14 4.8E-19 158.8 16.7 60 1218-1277 4-68 (165)
89 3khe_A Calmodulin-like domain 99.6 5E-15 1.7E-19 166.2 13.3 153 1244-1483 35-187 (191)
90 2lmt_A Calmodulin-related prot 99.6 1.6E-14 5.6E-19 155.5 16.7 137 1213-1435 10-146 (148)
91 1top_A Troponin C; contractIle 99.6 6.2E-15 2.1E-19 160.5 13.6 108 1366-1482 50-161 (162)
92 2mys_C Myosin; muscle protein, 99.6 1.3E-14 4.4E-19 155.5 15.8 105 1366-1481 38-148 (149)
93 1fpw_A Yeast frequenin, calciu 99.6 6.6E-15 2.2E-19 165.2 14.1 115 1372-1490 63-184 (190)
94 2i7a_A Calpain 13; calcium-dep 99.6 2.5E-14 8.4E-19 158.5 18.3 149 1222-1480 13-172 (174)
95 1juo_A Sorcin; calcium-binding 99.6 2.1E-14 7.1E-19 162.7 18.0 155 1213-1478 33-194 (198)
96 4dql_A Bifunctional P-450/NADP 99.6 7.2E-15 2.5E-19 182.8 15.5 191 1758-1998 156-362 (393)
97 1k94_A Grancalcin; penta-EF-ha 99.6 1E-14 3.5E-19 159.9 15.0 140 1195-1436 14-161 (165)
98 3ll8_B Calcineurin subunit B t 99.6 8.5E-15 2.9E-19 158.2 13.4 106 1373-1483 39-146 (155)
99 1uhk_A Aequorin 2, aequorin; E 99.6 1.2E-14 4.3E-19 162.9 15.2 101 1373-1482 63-174 (191)
100 1gjy_A Sorcin, CP-22, V19; cal 99.6 2.1E-14 7E-19 157.9 16.5 140 1195-1436 16-163 (167)
101 2ovk_C Myosin catalytic light 99.6 6.9E-15 2.4E-19 160.1 12.1 109 1365-1483 40-153 (159)
102 1tll_A Nitric-oxide synthase, 99.6 3E-15 1E-19 198.8 11.0 206 1761-2014 418-655 (688)
103 3u0k_A Rcamp; fluorescent prot 99.6 1.9E-14 6.5E-19 174.3 16.9 145 1195-1435 294-438 (440)
104 3sg6_A Gcamp2, myosin light ch 99.6 3.1E-15 1.1E-19 186.4 10.1 164 1222-1481 285-449 (450)
105 1qv0_A Obelin, OBL; photoprote 99.6 1.4E-14 4.9E-19 163.1 14.6 101 1373-1482 67-178 (195)
106 2f33_A Calbindin; EF-hand, Ca2 99.6 1.4E-14 4.8E-19 171.2 14.7 187 1210-1482 13-220 (263)
107 3j04_B Myosin regulatory light 99.6 5.1E-15 1.7E-19 157.8 9.7 135 1249-1483 7-142 (143)
108 1nya_A Calerythrin; EF-hand, m 99.6 3.4E-14 1.1E-18 157.0 16.4 98 1374-1482 60-165 (176)
109 2obh_A Centrin-2; DNA repair c 99.6 4.2E-14 1.4E-18 151.3 16.4 137 1213-1435 6-142 (143)
110 2ct9_A Calcium-binding protein 99.5 1E-14 3.6E-19 166.5 12.0 103 1376-1483 65-184 (208)
111 3fwb_A Cell division control p 99.5 1.1E-13 3.9E-18 150.3 19.5 146 1195-1436 15-160 (161)
112 1w7j_B Myosin light chain 1; m 99.5 2.8E-15 9.5E-20 161.5 6.6 107 1365-1481 39-150 (151)
113 3akb_A Putative calcium bindin 99.5 4.3E-14 1.5E-18 154.3 16.2 99 1373-1482 56-161 (166)
114 3dd4_A KV channel-interacting 99.5 1.9E-14 6.6E-19 167.0 14.1 119 1368-1490 98-223 (229)
115 1f20_A Nitric-oxide synthase; 99.5 2.6E-14 9E-19 180.4 16.4 181 1775-1999 208-405 (435)
116 2l2e_A Calcium-binding protein 99.5 3.1E-14 1E-18 159.8 15.3 155 1195-1436 6-175 (190)
117 1ggw_A Protein (CDC4P); light 99.5 1.5E-14 5.2E-19 153.6 12.0 132 1249-1481 5-139 (140)
118 2l4h_A Calcium and integrin-bi 99.5 1.3E-14 4.5E-19 166.6 12.1 117 1375-1491 94-212 (214)
119 2mys_B Myosin; muscle protein, 99.5 4.6E-14 1.6E-18 154.7 15.8 104 1368-1484 58-162 (166)
120 1exr_A Calmodulin; high resolu 99.5 1.5E-13 5E-18 147.8 19.1 137 1213-1435 10-146 (148)
121 2jul_A Calsenilin; EF-hand, ca 99.5 3.8E-14 1.3E-18 167.5 15.8 174 1229-1490 73-250 (256)
122 1g8i_A Frequenin, neuronal cal 99.5 9.7E-14 3.3E-18 155.6 18.2 155 1195-1436 6-175 (190)
123 1juo_A Sorcin; calcium-binding 99.5 4.6E-14 1.6E-18 159.8 15.6 139 1195-1435 47-193 (198)
124 1fpw_A Yeast frequenin, calciu 99.5 9.1E-14 3.1E-18 155.8 17.8 155 1195-1436 6-175 (190)
125 1wdc_B Scallop myosin; calcium 99.5 4.6E-14 1.6E-18 153.0 14.9 105 1366-1484 48-153 (156)
126 1ij5_A Plasmodial specific LAV 99.5 8.1E-15 2.8E-19 178.7 9.8 201 1151-1437 114-319 (323)
127 1dgu_A Calcium-saturated CIB; 99.5 3.4E-14 1.2E-18 158.6 14.1 117 1375-1491 63-181 (183)
128 2f2o_A Calmodulin fused with c 99.5 4.6E-14 1.6E-18 156.6 15.1 140 1212-1437 10-149 (179)
129 4ds7_A Calmodulin, CAM; protei 99.5 8.6E-14 2.9E-18 148.7 16.6 136 1213-1435 11-146 (147)
130 2r2i_A Guanylyl cyclase-activa 99.5 1.2E-14 4E-19 164.7 10.2 118 1372-1492 52-170 (198)
131 1s6i_A CDPK, calcium-dependent 99.5 4E-15 1.4E-19 167.2 6.2 108 1366-1484 40-147 (188)
132 3qrx_A Centrin; calcium-bindin 99.5 1.4E-13 4.7E-18 151.2 18.3 138 1213-1436 28-165 (169)
133 2ccm_A Calexcitin; EF hand, ca 99.5 5.2E-14 1.8E-18 158.1 15.3 98 1374-1482 66-172 (191)
134 3e3r_A Calcyphosin, calcyphosi 99.5 4.2E-14 1.4E-18 160.6 14.6 156 1213-1459 37-200 (204)
135 2ggz_A Guanylyl cyclase-activa 99.5 1.1E-14 3.7E-19 166.8 9.8 117 1372-1491 57-173 (211)
136 1dtl_A Cardiac troponin C; hel 99.5 8.5E-14 2.9E-18 151.4 15.9 149 1195-1436 10-159 (161)
137 3e3r_A Calcyphosin, calcyphosi 99.5 1.1E-14 3.8E-19 165.3 8.8 143 1249-1483 37-183 (204)
138 2aao_A CDPK, calcium-dependent 99.5 1.3E-14 4.6E-19 158.8 8.7 106 1366-1482 57-162 (166)
139 1s6c_A KV4 potassium channel-i 99.5 9E-14 3.1E-18 155.0 15.5 151 1198-1435 2-167 (183)
140 2ggz_A Guanylyl cyclase-activa 99.5 2E-14 7E-19 164.5 10.4 164 1211-1483 17-188 (211)
141 3ox6_A Calcium-binding protein 99.5 1.3E-13 4.4E-18 148.2 16.1 149 1195-1435 3-152 (153)
142 2bl0_C Myosin regulatory light 99.5 1.3E-13 4.4E-18 146.7 15.7 136 1212-1434 5-140 (142)
143 1jfj_A Ehcabp, calcium-binding 99.5 2.8E-14 9.6E-19 149.6 10.2 101 1366-1479 30-133 (134)
144 2lhi_A Calmodulin, serine/thre 99.5 2.8E-14 9.7E-19 158.4 10.7 136 1213-1435 11-146 (176)
145 2ovk_B RLC, myosin regulatory 99.5 2.3E-14 7.8E-19 154.9 9.5 106 1365-1484 45-151 (153)
146 3cs1_A Flagellar calcium-bindi 99.5 4.4E-15 1.5E-19 171.2 3.9 91 1384-1482 106-196 (219)
147 3mse_B Calcium-dependent prote 99.5 4.8E-14 1.7E-18 157.1 12.2 99 1371-1481 72-178 (180)
148 2qtl_A MSR;, methionine syntha 99.5 3.3E-14 1.1E-18 183.0 12.3 150 1761-1919 278-454 (539)
149 1qxp_A MU-like calpain; M-calp 99.5 1.4E-14 4.7E-19 200.6 9.2 199 1212-1482 533-803 (900)
150 3a8r_A Putative uncharacterize 99.5 1.4E-13 4.8E-18 153.3 15.2 114 1366-1484 53-173 (179)
151 2jnf_A Troponin C; stretch act 99.5 2.3E-13 7.9E-18 147.6 16.5 141 1213-1435 13-154 (158)
152 2hpk_A Photoprotein berovin; s 99.5 8.6E-14 2.9E-18 158.8 13.4 94 1378-1482 87-191 (208)
153 3dtp_E RLC, myosin regulatory 99.5 4.7E-14 1.6E-18 159.5 11.0 106 1365-1484 86-192 (196)
154 3pm8_A PFCDPK2, calcium-depend 99.5 1.8E-14 6.1E-19 163.2 7.4 136 1213-1435 57-194 (197)
155 1jba_A GCAP-2, protein (guanyl 99.5 2.2E-13 7.6E-18 154.8 16.5 138 1211-1435 20-175 (204)
156 2sas_A Sarcoplasmic calcium-bi 99.5 6.1E-14 2.1E-18 156.1 11.3 98 1374-1482 62-168 (185)
157 2r2i_A Guanylyl cyclase-activa 99.5 1.9E-13 6.5E-18 154.6 15.5 136 1213-1435 14-158 (198)
158 1q80_A SCP, sarcoplasmic calci 99.5 1.1E-13 3.8E-18 152.6 12.6 96 1374-1482 57-157 (174)
159 2lvv_A Flagellar calcium-bindi 99.5 2.6E-14 9E-19 165.5 7.9 102 1374-1483 94-200 (226)
160 1m45_A MLC1P, myosin light cha 99.5 1.1E-13 3.7E-18 148.5 11.9 140 1215-1435 6-146 (148)
161 1s1e_A KV channel interacting 99.5 2.4E-13 8.3E-18 157.2 15.3 155 1195-1436 32-201 (224)
162 1top_A Troponin C; contractIle 99.5 3.9E-13 1.3E-17 146.2 15.6 140 1213-1435 20-159 (162)
163 1nya_A Calerythrin; EF-hand, m 99.5 4.1E-13 1.4E-17 148.2 15.5 143 1213-1436 7-164 (176)
164 1jfj_A Ehcabp, calcium-binding 99.5 1.2E-13 4.2E-18 144.7 10.3 132 1215-1434 2-133 (134)
165 1wdc_C Scallop myosin; calcium 99.5 5.6E-13 1.9E-17 144.3 15.4 138 1213-1436 9-150 (156)
166 2mys_C Myosin; muscle protein, 99.5 1.2E-12 4E-17 140.1 17.8 137 1213-1435 8-147 (149)
167 3khe_A Calmodulin-like domain 99.4 1.8E-13 6.2E-18 153.4 11.9 140 1210-1438 37-187 (191)
168 2ccm_A Calexcitin; EF hand, ca 99.4 5.2E-13 1.8E-17 149.9 15.6 146 1213-1438 12-173 (191)
169 3bow_A Calpain-2 catalytic sub 99.4 3.6E-13 1.2E-17 180.6 16.7 162 1212-1483 531-700 (714)
170 2qac_A Myosin A tail domain in 99.4 2E-13 6.9E-18 146.1 11.3 101 1365-1480 44-145 (146)
171 3i5g_C Myosin catalytic light 99.4 5.4E-13 1.9E-17 145.5 14.8 145 1196-1435 2-150 (159)
172 3k21_A PFCDPK3, calcium-depend 99.4 2E-13 7E-18 153.7 11.6 134 1213-1435 52-190 (191)
173 1qv0_A Obelin, OBL; photoprote 99.4 6.4E-13 2.2E-17 149.5 14.9 159 1194-1438 11-179 (195)
174 2bpo_A CPR, P450R, NADPH-cytoc 99.4 6.8E-14 2.3E-18 185.9 7.6 204 1759-1999 414-654 (682)
175 2bl0_B Myosin regulatory light 99.4 8.4E-13 2.9E-17 140.7 14.8 137 1212-1436 4-140 (145)
176 2ovk_C Myosin catalytic light 99.4 9.9E-13 3.4E-17 142.9 15.5 139 1213-1436 9-151 (159)
177 2sas_A Sarcoplasmic calcium-bi 99.4 4.5E-13 1.6E-17 149.0 12.9 146 1213-1438 8-169 (185)
178 3akb_A Putative calcium bindin 99.4 9.6E-13 3.3E-17 143.6 14.9 144 1212-1437 3-161 (166)
179 2jul_A Calsenilin; EF-hand, ca 99.4 9.1E-13 3.1E-17 155.6 15.1 155 1195-1436 72-241 (256)
180 3qfs_A CPR, P450R, NADPH--cyto 99.4 8.5E-13 2.9E-17 166.2 15.2 185 1773-1999 230-429 (458)
181 1w7j_B Myosin light chain 1; m 99.4 2.7E-13 9.2E-18 145.8 9.2 138 1213-1435 10-149 (151)
182 3lyu_A Putative hydrogenase; t 99.4 2E-13 6.9E-18 145.6 8.0 136 1823-2009 3-138 (142)
183 1uhk_A Aequorin 2, aequorin; E 99.4 1.2E-12 4.2E-17 146.6 14.7 149 1213-1437 16-174 (191)
184 3lrx_A Putative hydrogenase; a 99.4 2.4E-13 8.2E-18 147.8 8.2 140 1820-2013 4-146 (158)
185 2ehb_A Calcineurin B-like prot 99.4 1.5E-12 5.3E-17 148.2 15.0 155 1195-1436 15-183 (207)
186 2mys_B Myosin; muscle protein, 99.4 5E-12 1.7E-16 138.4 18.2 134 1213-1436 25-159 (166)
187 2hpk_A Photoprotein berovin; s 99.4 1.4E-12 4.7E-17 148.7 14.2 146 1213-1437 36-191 (208)
188 3qe2_A CPR, P450R, NADPH--cyto 99.4 1.7E-12 5.8E-17 170.6 15.6 194 1761-1999 381-589 (618)
189 2aao_A CDPK, calcium-dependent 99.4 3.7E-13 1.3E-17 147.2 7.7 135 1213-1436 27-161 (166)
190 3j04_B Myosin regulatory light 99.4 1.2E-12 4E-17 139.4 11.1 133 1213-1435 7-139 (143)
191 1s6i_A CDPK, calcium-dependent 99.4 4.2E-13 1.4E-17 150.7 7.9 134 1213-1435 10-143 (188)
192 3mse_B Calcium-dependent prote 99.4 2.7E-12 9.1E-17 143.0 13.8 131 1213-1435 39-177 (180)
193 1q80_A SCP, sarcoplasmic calci 99.4 4.6E-12 1.6E-16 139.6 14.9 139 1213-1437 6-157 (174)
194 2hps_A Coelenterazine-binding 99.4 3.2E-13 1.1E-17 150.9 5.6 95 1377-1482 70-167 (186)
195 3i5g_B Myosin regulatory light 99.4 3.3E-12 1.1E-16 138.3 13.3 140 1195-1435 8-147 (153)
196 3dd4_A KV channel-interacting 99.4 4.9E-12 1.7E-16 146.7 15.6 153 1197-1436 47-214 (229)
197 1wdc_B Scallop myosin; calcium 99.4 1E-11 3.5E-16 134.4 17.1 132 1213-1435 18-149 (156)
198 3ll8_B Calcineurin subunit B t 99.3 3.5E-12 1.2E-16 137.6 13.1 136 1213-1438 6-146 (155)
199 2bec_A Calcineurin B homologou 99.3 3.9E-12 1.3E-16 144.3 13.9 150 1213-1436 29-183 (202)
200 3sg6_A Gcamp2, myosin light ch 99.3 7.2E-12 2.5E-16 156.3 17.2 137 1213-1435 312-448 (450)
201 2zfd_A Calcineurin B-like prot 99.3 1.7E-11 5.7E-16 141.9 18.2 137 1213-1436 48-194 (226)
202 3nyv_A Calmodulin-domain prote 99.3 4E-12 1.4E-16 164.5 14.3 136 1213-1437 335-481 (484)
203 3q5i_A Protein kinase; CDPK, m 99.3 2.9E-12 9.8E-17 166.7 12.9 137 1213-1438 355-499 (504)
204 1ggw_A Protein (CDC4P); light 99.3 6.9E-12 2.3E-16 133.0 12.5 134 1213-1435 5-138 (140)
205 2lvv_A Flagellar calcium-bindi 99.3 2E-12 7E-17 149.6 9.0 138 1213-1437 51-199 (226)
206 3lij_A Calcium/calmodulin depe 99.3 2.3E-12 7.9E-17 167.1 10.3 137 1213-1438 346-490 (494)
207 2ovk_B RLC, myosin regulatory 99.3 6.1E-12 2.1E-16 135.7 11.7 140 1195-1435 8-147 (153)
208 3dtp_E RLC, myosin regulatory 99.3 1.2E-11 4.1E-16 139.8 13.9 132 1213-1435 57-188 (196)
209 5pal_A Parvalbumin; calcium-bi 99.3 8.7E-12 3E-16 126.5 10.2 104 1365-1481 2-108 (109)
210 3cs1_A Flagellar calcium-bindi 99.3 5.1E-12 1.7E-16 145.5 9.4 155 1196-1437 28-196 (219)
211 3mwu_A Calmodulin-domain prote 99.3 5.1E-12 1.7E-16 163.6 10.5 138 1213-1437 331-482 (486)
212 1bu3_A Calcium-binding protein 99.3 1E-11 3.6E-16 125.9 10.5 106 1365-1480 3-108 (109)
213 3fs7_A Parvalbumin, thymic; ca 99.3 3.5E-12 1.2E-16 129.5 6.9 106 1365-1480 3-108 (109)
214 2hps_A Coelenterazine-binding 99.3 9.2E-12 3.1E-16 138.9 10.5 139 1213-1439 14-169 (186)
215 1rwy_A Parvalbumin alpha; EF-h 99.3 7.5E-12 2.6E-16 126.9 8.3 107 1365-1481 2-108 (109)
216 3a8r_A Putative uncharacterize 99.2 2.1E-11 7.3E-16 135.6 12.3 82 1195-1276 41-125 (179)
217 2pvb_A Protein (parvalbumin); 99.2 8.6E-12 2.9E-16 126.3 7.9 105 1365-1480 3-107 (108)
218 2ct9_A Calcium-binding protein 99.2 3.3E-11 1.1E-15 137.4 13.4 149 1213-1436 29-182 (208)
219 1dgu_A Calcium-saturated CIB; 99.2 6E-11 2.1E-15 132.1 15.1 141 1195-1435 12-170 (183)
220 1pva_A Parvalbumin; calcium bi 99.2 6.1E-12 2.1E-16 127.8 6.3 108 1364-1481 2-109 (110)
221 2qac_A Myosin A tail domain in 99.2 7.1E-11 2.4E-15 126.2 14.3 130 1214-1435 15-145 (146)
222 1rro_A RAT oncomodulin; calciu 99.2 1.3E-11 4.5E-16 125.0 6.9 106 1365-1480 2-107 (108)
223 2l4h_A Calcium and integrin-bi 99.2 5.5E-11 1.9E-15 136.3 12.5 153 1194-1436 28-202 (214)
224 1djx_A PLC-D1, phosphoinositid 99.2 7.2E-12 2.4E-16 164.3 5.7 136 1248-1483 10-151 (624)
225 3a4u_B Multiple coagulation fa 99.2 1.5E-11 5E-16 131.6 5.9 105 1374-1479 29-142 (143)
226 1sjj_A Actinin; 3-helix bundle 99.2 3.1E-11 1E-15 167.2 9.8 132 1249-1484 725-862 (863)
227 3h4s_E KCBP interacting Ca2+-b 99.1 1.5E-11 5E-16 130.3 4.6 101 1374-1483 5-107 (135)
228 1d2v_A Myeloperoxidase; heme-p 99.1 3.2E-12 1.1E-16 127.1 -1.8 90 337-433 5-101 (104)
229 1bu3_A Calcium-binding protein 99.1 2.4E-10 8.4E-15 115.8 11.7 106 1205-1398 2-107 (109)
230 3fs7_A Parvalbumin, thymic; ca 99.1 1.3E-10 4.6E-15 117.7 9.7 106 1206-1399 3-108 (109)
231 5pal_A Parvalbumin; calcium-bi 99.1 3.3E-10 1.1E-14 114.7 12.2 105 1207-1399 3-107 (109)
232 2kyc_A Parvalbumin-3, parvalbu 99.1 9.1E-12 3.1E-16 126.2 -0.1 106 1365-1480 2-107 (108)
233 2pvb_A Protein (parvalbumin); 99.1 2.3E-10 7.8E-15 115.8 10.2 106 1205-1399 2-107 (108)
234 1eg3_A Dystrophin; EF-hand lik 99.1 2E-10 6.8E-15 132.6 10.9 117 1371-1490 131-251 (261)
235 1rwy_A Parvalbumin alpha; EF-h 99.1 2.4E-10 8.3E-15 115.7 9.9 106 1206-1399 2-107 (109)
236 1pva_A Parvalbumin; calcium bi 99.1 2.4E-10 8.2E-15 116.0 9.0 107 1205-1399 2-108 (110)
237 1rro_A RAT oncomodulin; calciu 99.0 4E-10 1.4E-14 113.9 9.0 105 1206-1398 2-106 (108)
238 1djx_A PLC-D1, phosphoinositid 99.0 1.8E-10 6.2E-15 151.0 6.7 133 1213-1436 11-149 (624)
239 3h4s_E KCBP interacting Ca2+-b 99.0 2.2E-10 7.5E-15 121.2 5.2 62 1215-1276 5-67 (135)
240 2zkm_X 1-phosphatidylinositol- 98.9 5.6E-10 1.9E-14 149.7 8.1 95 1382-1483 196-299 (799)
241 2jjz_A Ionized calcium-binding 98.9 4.5E-10 1.5E-14 121.1 4.2 114 1210-1425 21-134 (150)
242 2kyc_A Parvalbumin-3, parvalbu 98.9 3.6E-10 1.2E-14 114.3 1.4 68 1206-1277 2-69 (108)
243 3a4u_B Multiple coagulation fa 98.8 1.9E-09 6.5E-14 115.2 4.9 64 1214-1277 28-96 (143)
244 2lv7_A Calcium-binding protein 98.8 5.6E-09 1.9E-13 104.1 5.7 63 1408-1479 36-98 (100)
245 1eg3_A Dystrophin; EF-hand lik 98.7 2.3E-08 7.9E-13 115.4 10.9 110 69-181 131-244 (261)
246 1sjj_A Actinin; 3-helix bundle 98.7 1.3E-08 4.3E-13 141.0 9.8 130 1212-1435 724-858 (863)
247 1s6j_A CDPK, calcium-dependent 98.7 1.9E-09 6.6E-14 104.3 0.4 85 1384-1479 1-85 (87)
248 2kld_A Polycystin-2; PC2, PKD2 98.6 2.1E-09 7.2E-14 111.6 -1.5 103 1364-1485 4-112 (123)
249 3ohm_B 1-phosphatidylinositol- 98.6 9.5E-08 3.2E-12 127.9 13.4 93 1384-1483 202-303 (885)
250 2lv7_A Calcium-binding protein 98.6 3.8E-08 1.3E-12 98.1 6.7 63 1213-1275 36-98 (100)
251 2zkm_X 1-phosphatidylinositol- 98.6 5.4E-08 1.9E-12 130.6 8.1 130 1212-1436 145-297 (799)
252 2kz2_A Calmodulin, CAM; TR2C, 98.6 1.5E-07 5.2E-12 92.6 9.2 70 1403-1481 24-93 (94)
253 3nso_A Protein S100-A3; EF-han 98.5 4.4E-08 1.5E-12 97.4 5.1 70 1408-1482 10-82 (101)
254 3n22_A Protein S100-A2; EF-han 98.5 1.3E-07 4.3E-12 93.8 8.1 70 1408-1482 11-83 (98)
255 1tiz_A Calmodulin-related prot 98.5 8.1E-08 2.8E-12 87.5 6.2 64 1409-1481 2-65 (67)
256 1k9u_A Polcalcin PHL P 7; poll 98.5 1.8E-07 6E-12 88.3 8.0 71 1407-1487 2-72 (78)
257 4drw_A Protein S100-A10/annexi 98.5 6.3E-08 2.1E-12 99.3 5.2 58 1365-1422 48-121 (121)
258 2jjz_A Ionized calcium-binding 98.5 4.9E-08 1.7E-12 105.1 4.4 95 1369-1482 21-115 (150)
259 1wy9_A Allograft inflammatory 98.5 9.8E-08 3.3E-12 102.4 6.5 86 1248-1425 47-132 (147)
260 2kz2_A Calmodulin, CAM; TR2C, 98.5 4.2E-07 1.4E-11 89.4 10.5 73 1204-1276 20-92 (94)
261 4eto_A Protein S100-A4; calciu 98.5 1.4E-07 4.8E-12 92.5 6.8 70 1408-1482 10-82 (93)
262 3zwh_A Protein S100-A4; Ca-bin 98.5 1.6E-07 5.6E-12 93.9 7.1 70 1408-1482 13-85 (104)
263 1tiz_A Calmodulin-related prot 98.5 3.1E-07 1.1E-11 83.6 8.4 64 1214-1277 2-65 (67)
264 1yx7_A Calsensin, LAN3-6 antig 98.5 1.1E-07 3.7E-12 90.9 5.5 72 1405-1481 4-77 (83)
265 1wlz_A DJBP, CAP-binding prote 98.5 1.9E-07 6.4E-12 93.7 7.3 85 1388-1482 5-89 (105)
266 1s6j_A CDPK, calcium-dependent 98.5 3.9E-08 1.3E-12 94.9 2.1 50 1225-1276 1-50 (87)
267 2b1u_A Calmodulin-like protein 98.5 1E-07 3.4E-12 88.0 4.8 68 1405-1481 3-70 (71)
268 3ohm_B 1-phosphatidylinositol- 98.4 6.1E-07 2.1E-11 120.2 13.7 130 1212-1436 149-301 (885)
269 3li6_A Calcium-binding protein 98.4 1.1E-07 3.6E-12 86.6 4.5 63 1410-1481 2-64 (66)
270 2joj_A Centrin protein; N-term 98.4 2.3E-07 7.8E-12 87.2 6.8 66 1407-1481 6-71 (77)
271 2lnk_A Protein S100-A4; EF-han 98.4 2E-07 6.8E-12 94.6 6.6 71 1407-1482 21-94 (113)
272 2ktg_A Calmodulin, putative; e 98.4 6.5E-07 2.2E-11 85.8 10.0 66 1213-1278 14-79 (85)
273 2opo_A Polcalcin CHE A 3; calc 98.4 3.4E-07 1.1E-11 88.2 7.8 71 1407-1487 10-80 (86)
274 2kn2_A Calmodulin; S MAPK phos 98.4 8.7E-07 3E-11 86.4 10.9 81 1248-1415 8-91 (92)
275 2wcb_A Protein S100-A12; calci 98.4 3.6E-07 1.2E-11 90.1 8.1 66 1408-1482 12-84 (95)
276 2opo_A Polcalcin CHE A 3; calc 98.4 6.2E-07 2.1E-11 86.3 9.5 64 1213-1277 11-74 (86)
277 1fi6_A EH domain protein REPS1 98.4 4.8E-07 1.6E-11 88.6 8.7 65 1407-1482 8-72 (92)
278 1c7v_A CAVP, calcium vector pr 98.4 1.1E-07 3.8E-12 90.4 3.9 71 1404-1484 5-76 (81)
279 1avs_A Troponin C; muscle cont 98.4 1.7E-07 6E-12 91.1 5.2 66 1407-1481 19-84 (90)
280 2ktg_A Calmodulin, putative; e 98.4 3.2E-07 1.1E-11 88.0 6.8 66 1408-1482 14-79 (85)
281 2b1u_A Calmodulin-like protein 98.4 3.3E-07 1.1E-11 84.5 6.4 66 1211-1276 4-69 (71)
282 1avs_A Troponin C; muscle cont 98.4 7.5E-07 2.6E-11 86.6 9.2 65 1213-1277 20-84 (90)
283 4drw_A Protein S100-A10/annexi 98.4 1.7E-07 5.7E-12 96.2 4.4 70 1408-1483 15-85 (121)
284 2joj_A Centrin protein; N-term 98.4 5.7E-07 2E-11 84.4 7.8 65 1213-1277 7-71 (77)
285 3li6_A Calcium-binding protein 98.4 1.4E-07 4.9E-12 85.7 3.4 62 1215-1276 2-63 (66)
286 1qx2_A Vitamin D-dependent cal 98.4 3.2E-07 1.1E-11 85.8 6.0 67 1406-1481 3-73 (76)
287 3nxa_A Protein S100-A16; S100 98.4 4E-07 1.4E-11 90.5 6.7 72 1408-1483 11-85 (100)
288 2y5i_A S100Z, S100 calcium bin 98.4 5.1E-07 1.8E-11 89.7 7.4 71 1407-1482 9-82 (99)
289 1k9u_A Polcalcin PHL P 7; poll 98.4 6.6E-07 2.2E-11 84.3 7.8 64 1213-1277 3-66 (78)
290 1j55_A S-100P protein; metal b 98.3 4.6E-07 1.6E-11 89.3 6.7 70 1408-1482 9-81 (95)
291 1c07_A Protein (epidermal grow 98.3 4.4E-07 1.5E-11 89.5 6.4 65 1407-1482 9-73 (95)
292 1qjt_A EH1, epidermal growth f 98.3 3.4E-07 1.2E-11 91.0 5.5 66 1406-1482 9-74 (99)
293 1fi6_A EH domain protein REPS1 98.3 1.7E-06 5.8E-11 84.7 10.1 65 1213-1279 9-73 (92)
294 3nso_A Protein S100-A3; EF-han 98.3 8.1E-07 2.8E-11 88.2 7.7 67 1212-1278 9-82 (101)
295 3rm1_A Protein S100-B; alpha-h 98.3 5.9E-07 2E-11 88.0 6.2 65 1408-1482 9-81 (92)
296 2kn2_A Calmodulin; S MAPK phos 98.3 1.4E-06 4.9E-11 84.8 9.0 67 1212-1278 8-74 (92)
297 2kgr_A Intersectin-1; structur 98.3 9.6E-07 3.3E-11 89.7 7.9 66 1407-1483 13-78 (111)
298 2pmy_A RAS and EF-hand domain- 98.3 1.1E-06 3.9E-11 85.7 7.9 64 1407-1481 26-89 (91)
299 3n22_A Protein S100-A2; EF-han 98.3 1.5E-06 5.2E-11 86.0 8.8 67 1212-1278 10-83 (98)
300 2d58_A Allograft inflammatory 98.3 8.8E-07 3E-11 89.3 6.9 68 1408-1484 32-99 (107)
301 1c7v_A CAVP, calcium vector pr 98.3 7.2E-07 2.5E-11 84.7 5.8 67 1210-1277 6-73 (81)
302 1wlz_A DJBP, CAP-binding prote 98.3 9.5E-07 3.3E-11 88.5 7.0 67 1211-1277 22-88 (105)
303 1qx2_A Vitamin D-dependent cal 98.3 1E-06 3.5E-11 82.3 6.5 67 1211-1277 3-73 (76)
304 1k2h_A S100A1, S-100 protein, 98.2 9.5E-07 3.3E-11 86.3 6.4 67 1407-1482 8-81 (93)
305 2kgr_A Intersectin-1; structur 98.2 2.4E-06 8.3E-11 86.7 9.6 65 1213-1279 14-78 (111)
306 1qjt_A EH1, epidermal growth f 98.2 1.3E-06 4.6E-11 86.6 7.4 68 1212-1281 10-77 (99)
307 2pmy_A RAS and EF-hand domain- 98.2 1.9E-06 6.6E-11 84.0 8.4 63 1213-1277 27-89 (91)
308 1j7q_A CAVP, calcium vector pr 98.2 9.9E-07 3.4E-11 84.9 6.1 68 1407-1481 13-80 (86)
309 1iq3_A Ralbp1-interacting prot 98.2 4.7E-07 1.6E-11 91.7 3.9 66 1406-1482 20-85 (110)
310 2kld_A Polycystin-2; PC2, PKD2 98.2 1E-07 3.6E-12 98.8 -1.2 101 1205-1402 4-110 (123)
311 1c07_A Protein (epidermal grow 98.2 1.5E-06 5.1E-11 85.7 7.1 66 1212-1279 9-74 (95)
312 2jq6_A EH domain-containing pr 98.2 1.9E-06 6.6E-11 90.3 8.3 66 1406-1483 49-114 (139)
313 2lnk_A Protein S100-A4; EF-han 98.2 1.9E-06 6.5E-11 87.4 7.9 66 1212-1277 21-93 (113)
314 2h2k_A Protein S100-A13; calci 98.2 8.5E-07 2.9E-11 89.1 5.0 66 1408-1482 22-91 (106)
315 3zwh_A Protein S100-A4; Ca-bin 98.2 2.9E-06 1E-10 84.8 8.7 67 1212-1278 12-85 (104)
316 1snl_A Nucleobindin 1, calnuc; 98.2 2.7E-06 9.2E-11 85.1 8.4 73 1409-1482 21-101 (103)
317 1eh2_A EPS15; calcium binding, 98.2 1.9E-06 6.5E-11 86.5 7.3 64 1408-1483 15-78 (106)
318 1yx7_A Calsensin, LAN3-6 antig 98.2 1.2E-06 4.2E-11 83.5 5.7 67 1212-1278 6-78 (83)
319 4eto_A Protein S100-A4; calciu 98.2 2.8E-06 9.6E-11 83.2 8.3 67 1212-1278 9-82 (93)
320 1j7q_A CAVP, calcium vector pr 98.2 3.1E-06 1.1E-10 81.3 8.3 64 1213-1277 14-80 (86)
321 1wy9_A Allograft inflammatory 98.2 2.5E-06 8.6E-11 91.3 8.2 92 1372-1482 22-113 (147)
322 3rm1_A Protein S100-B; alpha-h 98.2 3.7E-06 1.3E-10 82.3 8.6 66 1212-1278 8-81 (92)
323 2y5i_A S100Z, S100 calcium bin 98.2 4E-06 1.4E-10 83.2 8.6 66 1212-1277 9-81 (99)
324 1cb1_A Calbindin D9K; calcium- 98.1 8.2E-07 2.8E-11 83.5 3.3 67 1406-1481 5-75 (78)
325 2wcb_A Protein S100-A12; calci 98.1 3E-06 1E-10 83.4 7.5 66 1212-1277 11-83 (95)
326 1a4p_A S100A10; S100 family, E 98.1 2.5E-06 8.4E-11 84.2 6.8 65 1408-1482 9-78 (96)
327 1xk4_A Calgranulin A; S100 fam 98.1 8.6E-07 2.9E-11 86.9 3.4 66 1408-1482 10-78 (93)
328 1k8u_A S100A6, calcyclin, CACY 98.1 1.4E-06 4.7E-11 84.5 4.8 66 1408-1482 10-80 (90)
329 2kax_A Protein S100-A5; EF-han 98.1 2.1E-06 7.2E-11 84.0 6.1 68 1408-1482 10-79 (92)
330 1k2h_A S100A1, S-100 protein, 98.1 3.4E-06 1.2E-10 82.3 7.6 68 1212-1279 8-82 (93)
331 1cb1_A Calbindin D9K; calcium- 98.1 2.1E-06 7.2E-11 80.6 5.8 68 1210-1277 4-75 (78)
332 1xk4_C Calgranulin B; S100 fam 98.1 2.5E-06 8.5E-11 87.0 6.7 70 1408-1482 12-85 (113)
333 1iq3_A Ralbp1-interacting prot 98.1 1.9E-06 6.6E-11 87.2 5.7 67 1211-1279 20-86 (110)
334 2d58_A Allograft inflammatory 98.1 4.2E-06 1.4E-10 84.2 8.1 66 1212-1277 31-96 (107)
335 1j55_A S-100P protein; metal b 98.1 3.5E-06 1.2E-10 83.0 7.0 66 1212-1277 8-80 (95)
336 1eh2_A EPS15; calcium binding, 98.1 6.3E-06 2.2E-10 82.7 8.5 64 1213-1279 15-78 (106)
337 3qr0_A Phospholipase C-beta (P 98.1 3.5E-06 1.2E-10 112.4 8.6 123 1353-1483 169-310 (816)
338 2jq6_A EH domain-containing pr 98.1 8.8E-06 3E-10 85.3 9.6 66 1211-1279 49-114 (139)
339 1h8b_A ACT-EF34, alpha-actinin 98.1 5.7E-06 1.9E-10 77.2 7.2 62 1405-1483 7-73 (75)
340 3qr0_A Phospholipase C-beta (P 98.1 3.3E-06 1.1E-10 112.7 7.4 123 1221-1436 163-308 (816)
341 1qls_A S100C protein, calgizza 98.0 5.6E-06 1.9E-10 81.9 7.3 70 1408-1482 13-85 (99)
342 2kax_A Protein S100-A5; EF-han 98.0 5.1E-06 1.7E-10 81.3 6.7 67 1212-1278 9-79 (92)
343 1k8u_A S100A6, calcyclin, CACY 98.0 4.8E-06 1.6E-10 80.6 6.3 66 1213-1278 10-80 (90)
344 1psr_A Psoriasin, S100A7; EF-h 98.0 3.7E-06 1.3E-10 83.6 4.7 67 1408-1482 10-81 (100)
345 3nxa_A Protein S100-A16; S100 98.0 1.6E-05 5.6E-10 78.9 9.2 67 1212-1278 10-84 (100)
346 2h2k_A Protein S100-A13; calci 98.0 6.9E-06 2.4E-10 82.4 6.3 66 1212-1277 21-90 (106)
347 1xk4_A Calgranulin A; S100 fam 98.0 4.1E-06 1.4E-10 82.1 4.3 67 1212-1278 9-78 (93)
348 1snl_A Nucleobindin 1, calnuc; 98.0 8.1E-06 2.8E-10 81.6 6.4 68 1209-1276 16-99 (103)
349 1xk4_C Calgranulin B; S100 fam 98.0 1.5E-05 5.3E-10 81.1 8.5 65 1213-1277 12-84 (113)
350 1qls_A S100C protein, calgizza 97.9 1.7E-05 6E-10 78.3 6.7 66 1213-1278 13-85 (99)
351 3fia_A Intersectin-1; EH 1 dom 97.8 6.2E-05 2.1E-09 76.5 10.1 72 1195-1279 25-96 (121)
352 1a4p_A S100A10; S100 family, E 97.8 1.7E-05 5.7E-10 78.3 5.6 65 1212-1277 8-77 (96)
353 1psr_A Psoriasin, S100A7; EF-h 97.8 9.7E-06 3.3E-10 80.6 3.7 65 1212-1277 9-80 (100)
354 3fia_A Intersectin-1; EH 1 dom 97.8 3.4E-05 1.2E-09 78.4 7.3 63 1408-1482 33-95 (121)
355 1h8b_A ACT-EF34, alpha-actinin 97.4 0.00033 1.1E-08 65.2 7.3 58 1211-1276 8-70 (75)
356 1sra_A Sparc; extracellular ma 97.3 5E-05 1.7E-09 79.6 1.3 68 1408-1486 77-145 (151)
357 1tuz_A Diacylglycerol kinase a 97.1 6.9E-05 2.4E-09 75.7 0.2 95 3-111 10-118 (118)
358 1sra_A Sparc; extracellular ma 97.0 0.00017 6E-09 75.6 1.9 64 1211-1276 75-139 (151)
359 1nub_A Basement membrane prote 96.4 0.00082 2.8E-08 76.6 1.5 66 1409-1485 156-222 (229)
360 1tuz_A Diacylglycerol kinase a 96.2 0.0043 1.5E-07 62.7 5.7 42 1370-1411 67-116 (118)
361 1nub_A Basement membrane prote 95.8 0.0028 9.7E-08 72.2 2.1 63 1212-1276 154-217 (229)
362 2qpt_A EH domain-containing pr 82.1 2.9 9.9E-05 54.1 9.6 66 1211-1279 456-521 (550)
363 3uto_A Twitchin; kinase, muscl 82.0 0.27 9.2E-06 64.2 -0.0 56 1112-1167 354-414 (573)
364 2qpt_A EH domain-containing pr 79.7 2.8 9.7E-05 54.1 8.3 64 1406-1481 456-519 (550)
365 3hyh_A Carbon catabolite-derep 77.6 0.6 2E-05 54.8 1.0 53 1112-1168 210-267 (275)
366 1pul_A Hypothetical protein C3 75.5 14 0.00049 37.3 10.0 85 1367-1453 17-111 (125)
367 4aw0_A HPDK1, 3-phosphoinositi 74.4 0.46 1.6E-05 56.8 -1.2 46 1112-1161 232-277 (311)
368 1tki_A Titin; serine kinase, m 73.7 0.68 2.3E-05 55.6 0.0 57 1112-1168 201-262 (321)
369 2yab_A Death-associated protei 73.4 0.42 1.4E-05 58.6 -2.0 56 1112-1167 216-276 (361)
370 3soa_A Calcium/calmodulin-depe 71.8 0.69 2.4E-05 58.4 -0.6 57 1112-1168 211-272 (444)
371 1pul_A Hypothetical protein C3 71.6 14 0.00049 37.3 9.0 71 1208-1279 17-94 (125)
372 2bdw_A Hypothetical protein K1 70.7 0.96 3.3E-05 55.3 0.4 57 1112-1168 228-289 (362)
373 3ubd_A Ribosomal protein S6 ki 67.6 0.9 3.1E-05 54.1 -0.8 45 1112-1160 224-268 (304)
374 4b9d_A Serine/threonine-protei 66.8 1.4 4.8E-05 53.5 0.6 53 1112-1167 223-280 (350)
375 2l5y_A Stromal interaction mol 64.7 15 0.00052 38.3 7.8 61 1212-1277 14-75 (150)
376 3tdu_A DCN1-like protein 1; E2 63.5 1.7E+02 0.0058 32.1 16.3 69 1211-1279 2-71 (200)
377 3uc3_A Serine/threonine-protei 62.0 2.1 7.1E-05 52.2 1.0 54 1112-1167 216-278 (361)
378 4fih_A Serine/threonine-protei 61.9 1.1 3.8E-05 54.3 -1.5 55 1112-1167 268-327 (346)
379 4fl4_A Glycoside hydrolase fam 61.3 12 0.0004 35.6 5.7 54 1416-1480 22-77 (88)
380 3kev_A Galieria sulfuraria DCU 60.2 1.2E+02 0.0039 33.4 14.2 108 1365-1482 36-146 (199)
381 2x4f_A Myosin light chain kina 59.4 2.7 9.2E-05 51.5 1.3 57 1112-1168 286-347 (373)
382 2qr7_A Ribosomal protein S6 ki 56.9 2.1 7.3E-05 51.8 -0.2 56 1113-1168 219-282 (342)
383 2k60_A Protein (stromal intera 53.3 11 0.00037 39.4 4.4 63 1210-1277 12-75 (150)
384 2wei_A Calmodulin-domain prote 52.5 4.2 0.00014 47.4 1.4 58 1112-1169 220-282 (287)
385 3hko_A Calcium/calmodulin-depe 52.1 3.8 0.00013 49.1 0.9 57 1112-1168 274-335 (345)
386 4fie_A Serine/threonine-protei 52.0 2 6.9E-05 53.5 -1.6 55 1112-1167 345-404 (423)
387 4b99_A Mitogen-activated prote 51.3 2.2 7.5E-05 52.9 -1.5 57 1112-1168 261-349 (398)
388 2l5y_A Stromal interaction mol 50.0 43 0.0015 35.0 8.2 76 1370-1453 13-88 (150)
389 4dh2_B Dockerin type 1; cellul 49.5 12 0.0004 35.2 3.6 54 1417-1480 8-62 (82)
390 4fl4_A Glycoside hydrolase fam 49.3 17 0.00059 34.5 4.7 56 1381-1436 23-78 (88)
391 2jrf_A Tubulin polymerization- 48.3 27 0.00093 37.7 6.6 69 1408-1481 8-81 (184)
392 1kob_A Twitchin; kinase, intra 48.3 3.2 0.00011 51.2 -0.6 56 1112-1167 248-308 (387)
393 4gba_A DCN1-like protein 3; E3 47.9 3.3E+02 0.011 30.3 15.5 188 1212-1438 5-198 (221)
394 3kk8_A Calcium/calmodulin depe 47.9 3.8 0.00013 47.5 -0.0 57 1112-1168 205-266 (284)
395 3tdu_A DCN1-like protein 1; E2 47.8 1E+02 0.0036 33.8 11.3 108 1365-1482 34-144 (200)
396 2y0a_A Death-associated protei 46.8 3.1 0.0001 49.9 -1.1 56 1112-1167 215-275 (326)
397 3bq3_A Defective in cullin ned 46.5 3.9E+02 0.013 30.7 18.2 188 1210-1435 71-267 (270)
398 3kev_A Galieria sulfuraria DCU 46.0 3.3E+02 0.011 29.8 17.6 105 1210-1332 4-108 (199)
399 1wlm_A Protein CGI-38; structu 45.4 29 0.00099 36.4 6.1 69 1409-1482 16-89 (151)
400 2jam_A Calcium/calmodulin-depe 45.1 4.6 0.00016 47.5 0.1 55 1113-1167 206-265 (304)
401 3c0i_A Peripheral plasma membr 44.7 4.2 0.00014 49.2 -0.4 56 1112-1168 231-291 (351)
402 3f3z_A Calcium/calmodulin-depe 44.6 3.4 0.00012 47.8 -1.2 56 1112-1167 205-265 (277)
403 2k60_A Protein (stromal intera 44.3 23 0.0008 37.0 5.1 78 1368-1453 11-88 (150)
404 4dh2_B Dockerin type 1; cellul 43.6 10 0.00035 35.6 2.1 56 1222-1277 8-63 (82)
405 2y7j_A Phosphorylase B kinase 41.5 4.1 0.00014 49.7 -1.2 55 1112-1166 303-362 (365)
406 2ccl_B Endo-1,4-beta-xylanase 40.8 46 0.0016 29.3 5.9 53 1417-1480 5-57 (63)
407 2jrf_A Tubulin polymerization- 39.8 1.6E+02 0.0054 31.8 10.9 68 1373-1440 9-85 (184)
408 1wlm_A Protein CGI-38; structu 38.3 2.2E+02 0.0074 29.8 11.4 67 1373-1439 16-91 (151)
409 3v8s_A RHO-associated protein 38.0 5 0.00017 49.8 -1.2 56 1112-1167 271-333 (410)
410 2kav_A Sodium channel protein 37.9 22 0.00074 36.3 3.7 29 1458-1486 48-76 (129)
411 1nxk_A MAP kinase-activated pr 37.3 6 0.0002 48.9 -0.7 47 1122-1168 275-326 (400)
412 3zgw_A Maternal embryonic leuc 37.1 9.5 0.00032 46.1 1.1 53 1112-1168 208-265 (347)
413 4f9c_A Cell division cycle 7-r 36.7 4.6 0.00016 49.3 -1.8 32 1136-1167 320-356 (361)
414 1phk_A Phosphorylase kinase; g 35.2 6.8 0.00023 45.7 -0.6 55 1113-1167 228-287 (298)
415 2ac3_A MAP kinase-interacting 34.4 5.6 0.00019 46.9 -1.5 49 1119-1167 246-299 (316)
416 3bhy_A Death-associated protei 34.1 9.9 0.00034 43.9 0.6 59 1113-1171 210-273 (283)
417 2w4o_A Calcium/calmodulin-depe 33.8 8 0.00027 46.7 -0.3 55 1113-1167 249-309 (349)
418 2a2a_A Death-associated protei 33.8 5.9 0.0002 47.0 -1.5 56 1112-1167 216-276 (321)
419 2y3n_B Cellulosomal family-48 33.8 39 0.0013 30.7 4.3 51 1222-1277 7-59 (71)
420 2qjy_A Cytochrome B; cytochrom 33.3 2E+02 0.0068 35.6 11.8 60 1545-1607 51-113 (445)
421 3lm5_A Serine/threonine-protei 33.1 7.1 0.00024 46.6 -0.9 56 1112-1167 231-291 (327)
422 2ccl_B Endo-1,4-beta-xylanase 33.1 55 0.0019 28.8 5.1 52 1221-1276 4-57 (63)
423 2kav_A Sodium channel protein 30.4 23 0.0008 36.1 2.5 30 1250-1279 44-73 (129)
424 3kn6_A Ribosomal protein S6 ki 30.3 3.9 0.00014 48.9 -3.9 49 1119-1167 221-274 (325)
425 1vf5_A Cytochrome B6; photosyn 29.5 3.6E+02 0.012 29.9 11.9 60 1545-1607 40-102 (215)
426 2vn6_B Endoglucanase A; cell a 28.8 61 0.0021 28.7 4.7 50 1382-1436 6-55 (64)
427 2vn6_B Endoglucanase A; cell a 28.3 38 0.0013 30.0 3.2 50 1222-1276 5-54 (64)
428 3ul4_B Cellulosome enzyme, doc 28.0 35 0.0012 30.5 2.9 51 1222-1275 6-56 (65)
429 3cx5_C Cytochrome B-C1 complex 27.0 3.2E+02 0.011 33.1 11.9 60 1545-1607 36-98 (385)
430 1m0f_B GPB, scaffolding protei 26.8 49 0.0017 28.6 3.3 50 11-60 5-55 (68)
431 3fpq_A Serine/threonine-protei 26.6 10 0.00035 44.7 -1.1 54 1112-1167 227-286 (290)
432 3fhr_A MAP kinase-activated pr 25.9 14 0.00048 44.1 -0.0 46 1123-1168 242-292 (336)
433 3ul4_B Cellulosome enzyme, doc 24.1 67 0.0023 28.6 4.0 50 1382-1435 7-57 (65)
434 2y3n_B Cellulosomal family-48 23.6 65 0.0022 29.2 3.9 51 1382-1436 8-59 (71)
435 4gba_A DCN1-like protein 3; E3 22.5 3.8E+02 0.013 29.8 10.6 86 1371-1462 5-90 (221)
436 3g33_A Cell division protein k 21.2 16 0.00054 42.9 -0.9 56 1112-1167 217-300 (308)
437 4dck_A Sodium channel protein 20.6 74 0.0025 33.9 4.1 41 1445-1486 13-53 (168)
438 4g3f_A NF-kappa-beta-inducing 20.3 12 0.00042 45.0 -2.2 48 1112-1160 254-301 (336)
439 3fe3_A MAP/microtubule affinit 20.1 14 0.00047 44.2 -1.8 52 1112-1167 212-268 (328)
No 1
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=100.00 E-value=8.5e-116 Score=1117.89 Aligned_cols=533 Identities=27% Similarity=0.469 Sum_probs=449.2
Q ss_pred Cccccccccccccccccccccccc--ccccccCCCCcccc-----ccccCCccccccccCCCCccccccccccCCcccCC
Q psy5584 337 SKANLAVGTVDKMAVREWLHANHK--RFVKIRLGPETCLH-----TVDRKGEKLRTVNFKNCDTVTIEESQFSTNREFQH 409 (2014)
Q Consensus 337 ~~~~~~~gs~n~~~~~~~~~a~~~--~~~~~~~~~~~~~~-----~~~~~g~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 409 (2014)
++.|+.||+|||+.+|.||+|+++ |.+.+.+.++-..| +.+.+|..||++ +.||.......++...++
T Consensus 19 ~~yRt~DG~CNNl~~P~wGaa~t~f~R~lpp~Y~DGv~~Pr~~~~~~~~~g~~lP~~-----R~VS~~l~~~~~~~~~~~ 93 (595)
T 3q9k_A 19 SPYRTITGDCNNRRSPALGAANRALARWLPAEYEDGLALPFGWTQRKTRNGFRVPLA-----REVSNKIVGYLDEEGVLD 93 (595)
T ss_dssp CSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCH-----HHHHHHHTCCSCCTTCEE
T ss_pred CCccCCCCCccCcCCcccCCCCCCccCCCCcccccccccccccccccccCCCCCCCH-----HHHHHHHHhcccccCCCC
Confidence 578999999999999999999987 44444344322223 234566666655 688865443334555677
Q ss_pred CCCceeeeecCcccccccccccCCCC----------C----CC--CcceeeccCCCCccccCCCCCCceeecccCcccCC
Q psy5584 410 QAKTSIEDFYGDGQVVSSEIVMASES----------G----CP--IEMHEIEIEKCDEMYDKDCEGGKYIPFHRAGYDRS 473 (2014)
Q Consensus 410 ~~~t~~~~~fg~gq~i~hDi~~~~~~----------~----c~--~~~~~i~i~~~Dp~~~~~~~~~~c~~f~Rs~~~~~ 473 (2014)
++.|+|+|+|| |||+|||++|+.. + |+ ++|+||+||++||+|... + .||||+||.+++.
T Consensus 94 ~~~t~~~~~wG--Qfi~HDi~~t~~~~~~~~~~~~~~C~~~c~~~~~C~pI~ip~~Dp~~~~~--~-~Cm~f~RS~~~~~ 168 (595)
T 3q9k_A 94 QNRSLLFMQWG--QIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPKLKTQ--G-KCMPFFRAGFVCP 168 (595)
T ss_dssp EEEEHHHHHHH--HHHHHHHCCCCBCCSCTTCSHHHHHHHHCCCBTTBCCEECCTTCHHHHHS--C-SEECCBCBCBSSC
T ss_pred CCchHHHHHHH--HHHHhhhhccCccccccccCCCcCccccccCCCCceeeeCCCCCCcccCC--C-ceeEeecCCCcCC
Confidence 88999999999 9999999988643 1 43 799999999999998532 3 5999999999987
Q ss_pred CCCCCCCcccccccccccccCCcCCCCCHHHHHhhhcCCC--CccccCCCCCCCCCCCCCCCCCCCCCCCccccc--ccc
Q psy5584 474 TGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTN--GSLATDASGKMPVKNTMRVPLFNNPVPHSLRTL--SPE 549 (2014)
Q Consensus 474 ~g~~~~~~r~q~N~~Ts~lD~S~vYGs~~~~~~~LR~~~~--G~L~~~~~~~~p~~~~~~lp~~~~~~~~~~~~~--~~~ 549 (2014)
+|.....||||+|++|||||||+||||+++++++||+|++ |+||++.. +...+...+|..+.+...|.... ...
T Consensus 169 ~~~~~~~~reQiN~~Ts~lD~S~VYGss~~~~~~LR~~~~~~G~Lk~~~~--~~~~g~~~lP~~~~~~~~c~~~~~~~~~ 246 (595)
T 3q9k_A 169 TPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQE--AWDHGLAYLPFNNKKPSPCEFINTTARV 246 (595)
T ss_dssp SSCCCSSCCCBEECSCSSSSCHHHHCSSHHHHHHTBCCSSTTCCBCCCSS--CCBTTBCCCCBCCCSSCHHHHTCTTTCC
T ss_pred CCCCCcchHhhhccccceeeeeeccCCCHHHHHHHhCCCCCCceeecccc--cCCCCccCCCCCCCCCCcccccCCCCCC
Confidence 6655455999999999999999999999999999999999 99998631 11112222333221111121111 234
Q ss_pred cccccCCcccccchhHHHHHHHHHhhhHHHHHHHHhhCCCCCchHhHHHHHhHHHHHHHHhhhhhhchhhhCCC----CC
Q psy5584 550 RLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRS----LS 625 (2014)
Q Consensus 550 ~~~~~Gd~R~ne~p~l~~lh~lf~R~HN~ia~~L~~~np~w~De~lFq~AR~iv~a~~Q~I~~~e~Lp~ilg~~----~~ 625 (2014)
.||++||.|+||+|+|++|||||+|||||||++|+++||+|+||+||||||+||||+||||||+||||.|||.+ ++
T Consensus 247 ~cf~aGD~R~ne~p~L~~lhtlflREHNria~~L~~~nP~W~dE~LfQeAR~Iv~A~~Q~Ity~E~LP~ilG~~~~~~~~ 326 (595)
T 3q9k_A 247 PCFLAGDFRASEQILLATAHTLLLREHNRLARELKKLNPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIP 326 (595)
T ss_dssp CCBCCSSTTTTSBHHHHHHHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHGGGHHHHSC
T ss_pred cccccCCccccccHHHHHHHHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHHeeeeeHHHHHHHHhCchhhhhCC
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999987 57
Q ss_pred CCCCCCCCCCCCchhHHHHhHhhhccccCCCcccccCcccCCCcCCCCCCCCCCCCCccCCCCCccccchhhhhhccccC
Q psy5584 626 PYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSL 705 (2014)
Q Consensus 626 ~~~~y~~~~~p~is~eF~~aa~RfgHs~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~r~ghs~ 705 (2014)
.|.||++.++|+|++|| +||||||||||++.+.+++. +|...
T Consensus 327 ~~~gY~~~v~p~i~neF-~aafRfgHsli~~~~~~~~~--~~~~~----------------------------------- 368 (595)
T 3q9k_A 327 PYQGYNNSVDPRISNVF-TFAFRFGHMEVPSTVSRLDE--NYQPW----------------------------------- 368 (595)
T ss_dssp SCCCCCTTSCCCCBTTH-HHHGGGGGGGCCSEEECBCT--TSSBC-----------------------------------
T ss_pred CccCCCCCCCCccHHHH-HHHHHhHHhhCcchhhccCc--ccccc-----------------------------------
Confidence 89999999999999999 99999999999998876655 11110
Q ss_pred CCCCccccCcccCCCCCCCCCcccccccCCCCCCCCCccccccccccCcccccCcCcHHHHHHHHhhcccc--ccccccc
Q psy5584 706 IPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTNVMTYSTLEEILMGMASQLSE--KEDAVLC 783 (2014)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ll~g~~~q~a~--~~d~~~~ 783 (2014)
...+.++|++.||+++.++.++++|++++||+.|+++ +.|..++
T Consensus 369 ----------------------------------~~~~~~~L~~~ff~~~~~~~~~gid~llrGl~~q~a~~~~~d~~~~ 414 (595)
T 3q9k_A 369 ----------------------------------GPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAKKSKLMNQDKMVT 414 (595)
T ss_dssp ----------------------------------STTCEEEGGGGBTCCHHHHTTTCSHHHHHHHHHSEEECCCTTSCSC
T ss_pred ----------------------------------CCCCceeHHHHhcChHHhhhccchHHHHHHHhhCcccccCCCccCC
Confidence 0012389999999999998899999999999999999 8999999
Q ss_pred HHhhhccCCCCCCC-CcchhhhhhhhhccCCCCChHHHHHhcCCCCCCChhhhhhhccccccccchHHHHHHHHHHhCCC
Q psy5584 784 SDIRDKLFGPNEFS-RRDLGALNIMRGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNS 862 (2014)
Q Consensus 784 ~~l~~~lf~~~~~~-~~DL~alnIqRgRd~Glp~yn~~R~~~gl~~~~~f~dl~~~~~~~~~~~~~~~~~~~L~~lY~~~ 862 (2014)
++|+++||++.+.. |+||+|+|||||||||||+||+||++|||++++||+||+ +.+. + ++++++|+++|++
T Consensus 415 ~~l~~~Lf~~~~~~~g~DL~alnIqRgRdhGlp~yn~~R~~~gl~~~~sf~dl~---~~~~--~--~~~~~~l~~lY~~- 486 (595)
T 3q9k_A 415 SELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQ---TVLK--N--KILAKKLMDLYKT- 486 (595)
T ss_dssp HHHHTCEECTTSCSEEECHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHH---HHHT--C--HHHHHHHHHHHSS-
T ss_pred HHHHHHhccCCCccccccHHHHHHHHHHHhCCCCHHHHHHHcCCCCCCCHHHHh---hhcC--c--HHHHHHHHHHhCC-
Confidence 99999999988777 999999999999999999999999999999999999995 3343 2 8899999999995
Q ss_pred CCCcccccccccCCC---CCCChHHHHHHHHHHHHhhcCCcceeccCCCCCCCHHHHHHHHhcchhhHhhhcCCCCcccc
Q psy5584 863 LDNIDLYIGGMLESH---EGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAI 939 (2014)
Q Consensus 863 ~ddiDL~~G~l~E~~---~~~Gpt~~~ii~~qf~rlr~gDRf~~en~~~~~ft~~ql~ei~~~tl~~iic~n~~~~~~~i 939 (2014)
|||||||||+|+|++ +.+||||+|||++||+|||+|||||||| ++.||++||+||||+||++|||+|+++ +.|
T Consensus 487 ~d~iDl~vG~l~E~~~~g~~~Gptf~~ii~~qf~~lr~gDRf~yen--~~~ft~~ql~ei~~~sla~iic~n~~i--~~v 562 (595)
T 3q9k_A 487 PDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWEN--PGVFTEKQRDSLQKVSFSRLICDNTHI--TKV 562 (595)
T ss_dssp GGGSCHHHHHHHSCCCTTBSSCHHHHHHHHHHHHHHHHTCTTCTTS--BTTBCHHHHHHHTTCCHHHHHHHHSSC--CEE
T ss_pred ccccceeecccccccCCCCCcCHHHHHHHHHHHHHHHhcCCCeecC--CCcCCHHHHHHHHhCCHHHHHhcCCCc--ccc
Confidence 999999999999998 7899999999999999999999999998 589999999999999999999999875 799
Q ss_pred ccccccccCCCCCCCCcccCCCCCCCCCCCCcccCC
Q psy5584 940 QKNVFFWNATDPCPQPAQLNASMMMPCSYLKGFDYF 975 (2014)
Q Consensus 940 q~~~F~~~~~~~c~~~~~~~~~~~~~c~~~~~~d~~ 975 (2014)
|++||..++ ..|.+++|++++.+|+-
T Consensus 563 q~~~F~~~~----------~~n~~v~C~~ip~~dL~ 588 (595)
T 3q9k_A 563 PLHAFQANN----------YPHDFVDCSTVDKLDLS 588 (595)
T ss_dssp ESSTTSCCC----------TTTTEEEGGGSCCCCCG
T ss_pred cHhhccCCC----------CCCCCccCCCCCCCChH
Confidence 999999654 35789999999999974
No 2
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=100.00 E-value=4.9e-102 Score=973.94 Aligned_cols=438 Identities=31% Similarity=0.556 Sum_probs=382.1
Q ss_pred CC--CCcceeeccCCCCccccCCCCCCceeecccCcccCCCCCCCCCcccccccccccccCCcCCCCCHHHHHhhhcCCC
Q psy5584 436 GC--PIEMHEIEIEKCDEMYDKDCEGGKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTN 513 (2014)
Q Consensus 436 ~c--~~~~~~i~i~~~Dp~~~~~~~~~~c~~f~Rs~~~~~~g~~~~~~r~q~N~~Ts~lD~S~vYGs~~~~~~~LR~~~~ 513 (2014)
.| .++|+||+||++||+|+. +..||||+||.+++.+| +++||||+|++|||||||+||||+++++++||+|++
T Consensus 6 ~c~~~~~C~pI~ip~~Dp~~~~---~~~cl~f~Rs~~~~~~g--~~~~req~N~~T~~lD~S~vYGs~~~~~~~LR~~~~ 80 (466)
T 1d2v_C 6 SCVQQPPCFPLKIPPNDPRIKN---QADCIPFFRSCPACPGS--NITIRNQINALTSFVDASMVYGSEEPLARNLRNMSN 80 (466)
T ss_dssp CCCCCTTBCCEECCTTCSSCCC---TTCEECCBCCCBSSTTC--SSSCCCBEECSCSSSSCHHHHCSSHHHHHHHBCCSS
T ss_pred cCCCCCCCcceeCCCCCCCcCC---CCcceeeecCccccCCC--CCCHHHHhhccccccccccCcCCCHHHHHHHhccCC
Confidence 46 479999999999999863 46899999999998776 568999999999999999999999999999999998
Q ss_pred --CccccCCCCCCCCCCCCCCCCCCC-CCCCcccc--cccccccccCCcccccchhHHHHHHHHHhhhHHHHHHHHhhCC
Q psy5584 514 --GSLATDASGKMPVKNTMRVPLFNN-PVPHSLRT--LSPERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHP 588 (2014)
Q Consensus 514 --G~L~~~~~~~~p~~~~~~lp~~~~-~~~~~~~~--~~~~~~~~~Gd~R~ne~p~l~~lh~lf~R~HN~ia~~L~~~np 588 (2014)
|+|+++.. ++..+...+|..+. +++ |... .....||++||.|+||+|+|++|||+|+|||||||++|+++||
T Consensus 81 ~~G~Lk~~~~--~~~~g~~~lP~~~~~~~~-c~~~~~~~~~~cf~~GD~R~ne~p~l~~lhtlflReHNria~~L~~~nP 157 (466)
T 1d2v_C 81 QLGLLAVNQR--FQDNGRALLPFDNLHDDP-CLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLATELKSLNP 157 (466)
T ss_dssp SSCCBCCCSS--CCBTTBCCCCBCCCTTCS-GGGGCTTTCCCCBCCSSTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCeeccCCc--cCCCCCcCCCCCCCCCCc-ccccccCCCcchhcccCcccccCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998631 11111122222211 222 3221 2234699999999999999999999999999999999999999
Q ss_pred CCCchHhHHHHHhHHHHHHHHhhhhhhchhhhCCC-----CCCCCCCCCCCCCCchhHHHHhHhhhccccCCCcccccCc
Q psy5584 589 ELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRS-----LSPYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDE 663 (2014)
Q Consensus 589 ~w~De~lFq~AR~iv~a~~Q~I~~~e~Lp~ilg~~-----~~~~~~y~~~~~p~is~eF~~aa~RfgHs~v~~~~~~~~~ 663 (2014)
+|+||+||||||+||||+||||||+||||.|||.+ .+.|.||++.++|+|++|| +||||||||||++.+.+++.
T Consensus 158 ~W~DE~LFqeAR~Iv~a~~Q~I~~~EyLp~ilG~~~~~~~~~~~~gy~~~v~p~isnEF-~aafRfgHsli~~~~~~~~~ 236 (466)
T 1d2v_C 158 RWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPTYRSYNDSVDPRIANVF-TNAFRYGHTLIQPFMFRLDN 236 (466)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHSCCCCCCCTTSCCSCBHHH-HHHGGGGGGGCCSEEECBCT
T ss_pred CCChHHHHHHHHHHHHHHHHHHhHHHHHHHHhCchhhhhcCCcccCCCCCCCCchhHHH-HHHHhcccccCchhhccccc
Confidence 99999999999999999999999999999999964 5788999999999999999 99999999999998776554
Q ss_pred ccCCCcCCCCCCCCCCCCCccCCCCCccccchhhhhhccccCCCCCccccCcccCCCCCCCCCcccccccCCCCCCCCCc
Q psy5584 664 KCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDP 743 (2014)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~r~ghs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (2014)
+|.+. + ..+
T Consensus 237 --~~~~~-----------------------------------------------------~----------------~~~ 245 (466)
T 1d2v_C 237 --RYQPM-----------------------------------------------------E----------------PNP 245 (466)
T ss_dssp --TSSBC-----------------------------------------------------S----------------SCS
T ss_pred --ccccc-----------------------------------------------------C----------------CCC
Confidence 12110 0 012
Q ss_pred cccccccccCcccccCcCcHHHHHHHHhhcccc--cccccccHHhhhccCCCCCCCCcchhhhhhhhhccCCCCChHHHH
Q psy5584 744 AIRLCSNWWDSTNVMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGPNEFSRRDLGALNIMRGRDNGIADYNTVR 821 (2014)
Q Consensus 744 ~~~l~~~~~~~~~~~~~~~~~~ll~g~~~q~a~--~~d~~~~~~l~~~lf~~~~~~~~DL~alnIqRgRd~Glp~yn~~R 821 (2014)
.++|++.||+++.++.++++|++++||+.|+++ +.|..++++|+++||++.+..|+||+|+|||||||||||+||+||
T Consensus 246 ~~~l~~~~f~~~~~~~~~g~d~~lrgl~~q~a~~~~~d~~l~~~l~~~lf~~~~~~~~DL~alnIqRgRDhGlp~YN~~R 325 (466)
T 1d2v_C 246 RVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWR 325 (466)
T ss_dssp EEEGGGTTTCHHHHHHTTCHHHHHHHHHHSEEECCBTTBCSCHHHHTCBTGGGSSSCBCHHHHHHHHHHHTTCCCHHHHH
T ss_pred ceeHHHHhcChHHHhhccCchHHHHHHhhCccccccCchhhhHHHHHHhhcccCccchhHHHHHHHHHHHcCCCCHHHHH
Confidence 388999999999888899999999999999998 689999999999999988888999999999999999999999999
Q ss_pred HhcCCCCCCChhhhhhhccccccccchHHHHHHHHHHhCCCCCCcccccccccCCC---CCCChHHHHHHHHHHHHhhcC
Q psy5584 822 SNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESH---EGPGPLFTNIILEQFTRLRDA 898 (2014)
Q Consensus 822 ~~~gl~~~~~f~dl~~~~~~~~~~~~~~~~~~~L~~lY~~~~ddiDL~~G~l~E~~---~~~Gpt~~~ii~~qf~rlr~g 898 (2014)
++|||++++||+||+ +.+. | ++++++|+++|++ |||||||||+++|++ +.+||||+|||++||+|||+|
T Consensus 326 ~~~gL~~~~tf~dl~---~~~~--d--~~~~~~L~~lY~~-~d~vDL~vG~laE~~~~G~~~Gptf~~ii~~qf~rLr~g 397 (466)
T 1d2v_C 326 RFCGLPQPETVGQLG---TVLR--N--LKLARKLMEQYGT-PNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDG 397 (466)
T ss_dssp HHTTCCCCCSHHHHH---HHHT--C--HHHHHHHHHHHSS-GGGSCHHHHHHHSCCCTTCSSCHHHHHHHHHHHHHHHHT
T ss_pred HHcCCCCCCCHHHHh---hccC--C--HHHHHHHHHHhCC-ccccceeecccccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999999999999995 3342 2 8999999999995 999999999999998 789999999999999999999
Q ss_pred CcceeccCCCCCCCHHHHHHHHhcchhhHhhhcCCCCccccccc-cccccCCCCCCCCcccCCCCCCCCCCCCcccCC
Q psy5584 899 DRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKN-VFFWNATDPCPQPAQLNASMMMPCSYLKGFDYF 975 (2014)
Q Consensus 899 DRf~~en~~~~~ft~~ql~ei~~~tl~~iic~n~~~~~~~iq~~-~F~~~~~~~c~~~~~~~~~~~~~c~~~~~~d~~ 975 (2014)
||||||| |+.||++|++||||+||++|||+|+++ +.||++ ||..++ ..|..++|++++.+|+-
T Consensus 398 DRf~yen--~~~ft~~ql~ei~~~sl~~iic~n~~~--~~iq~~~~F~~~~----------~~n~~~~C~~ip~~dl~ 461 (466)
T 1d2v_C 398 DRFWWEN--EGVFSMQQRQALAQISLPRIICDNTGI--TTVSKNNIFMSNS----------YPRDFVNCSTLPALNLA 461 (466)
T ss_dssp CTTCTTS--TTTSCHHHHHHHTTCCHHHHHHHHSSC--CEEECSCTTTCCS----------TTTTEEEGGGSCCCCCG
T ss_pred CcccccC--CCcccchhhHHHHhCCHHHHHHhcCCC--cccCCCccccCCC----------CCCCCcCcccCCCCCch
Confidence 9999997 689999999999999999999999975 799999 999876 24778999999999974
No 3
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=100.00 E-value=1e-85 Score=837.95 Aligned_cols=432 Identities=16% Similarity=0.252 Sum_probs=346.2
Q ss_pred CCcccccccccccccccccccccccccccccCCCCccccccccCCccccccccCCCCccccccccccCCcccCCCCCcee
Q psy5584 336 PSKANLAVGTVDKMAVREWLHANHKRFVKIRLGPETCLHTVDRKGEKLRTVNFKNCDTVTIEESQFSTNREFQHQAKTSI 415 (2014)
Q Consensus 336 ~~~~~~~~gs~n~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~t~~ 415 (2014)
..+.|+.||+||+-.+.+++++.|.+.+. |.|. ..|..| |+|+.|+.. .+......+++++.|+|
T Consensus 102 ~~~Yrs~dg~~N~t~~~R~lPp~y~dg~~-P~g~--------~~~~~L-----P~pr~vs~~-l~~r~~~~p~~~~~s~l 166 (587)
T 3nt1_A 102 HYGYKSWEAFSNLSYYTRALPPVADDCPT-PMGV--------KGNKEL-----PDSKEVLEK-VLLRREFIPDPQGSNMM 166 (587)
T ss_dssp TBSSCCHHHHHCTTBCBBSSCCCCTTCSB-TTBS--------SSCSSC-----CCHHHHHHH-HTBCSSCCBCTTCBBHH
T ss_pred CCCccccccccCCCeeecccCCccccCCC-cccc--------CCCCCC-----CCHHHHHHH-HhcCCCcCCCCCCccHH
Confidence 45689999999998899999888776653 2222 223444 555788753 23334556788899999
Q ss_pred eeecCcccccccccccCCCCCCCCcceeeccCCCCccccCCCCCCceeecccCcccCCCCCCCCCcccccccccccccCC
Q psy5584 416 EDFYGDGQVVSSEIVMASESGCPIEMHEIEIEKCDEMYDKDCEGGKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGS 495 (2014)
Q Consensus 416 ~~~fg~gq~i~hDi~~~~~~~c~~~~~~i~i~~~Dp~~~~~~~~~~c~~f~Rs~~~~~~g~~~~~~r~q~N~~Ts~lD~S 495 (2014)
+++|| |||+||++.|.... |++ +.|++|||||||
T Consensus 167 ~~~fg--Q~i~Hd~f~t~~~~-------------------------~~~-------------------~~n~~t~~lD~S 200 (587)
T 3nt1_A 167 FAFFA--QHFTHQFFKTDHKR-------------------------GPG-------------------FTRGLGHGVDLN 200 (587)
T ss_dssp HHHHH--HHHHTTTCCBCTTT-------------------------CTT-------------------BBSCTTCSCCCH
T ss_pred HHHHH--HHHhhhccccCCCC-------------------------CCc-------------------cccCccceeeec
Confidence 99999 99999998874211 111 268899999999
Q ss_pred cCCCCCHHHHHhhhcCCCCccccC--CCCCCCCCCC-CCCCCCCCCCCCcccccccccccccCCcccccchhHHHHHHHH
Q psy5584 496 FIYSTSEAWLNAMRSFTNGSLATD--ASGKMPVKNT-MRVPLFNNPVPHSLRTLSPERLYLLGDARSNQNPALLAFSILF 572 (2014)
Q Consensus 496 ~vYGs~~~~~~~LR~~~~G~L~~~--~~~~~p~~~~-~~lp~~~~~~~~~~~~~~~~~~~~~Gd~R~ne~p~l~~lh~lf 572 (2014)
+||||+++++++||+|++|+||++ ++..+|+... ..+++..++ ..+...||++||.|+||+|+|++|||||
T Consensus 201 ~IYGss~~~~~~LR~~~~G~Lk~~~~~g~~~pP~~~~~~~~~~~~~------~~~~~~cf~~GD~R~ne~pgL~alhtlf 274 (587)
T 3nt1_A 201 HIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTVKDTQVEMIYPP------HIPENLQFAVGQEVFGLVPGLMMYATIW 274 (587)
T ss_dssp HHHCSSHHHHHHHBCSSTTCBCCEEETTEEECCBHHHHCCCCCCCT------TSCGGGCBCCSSTTTTSCHHHHHHHHHH
T ss_pred cCCCCCHHHHHhccCCCCCeeeeecCCCccCCCCCCCcccccccCC------CCCcccccccCCcccccChHHHHHHHHH
Confidence 999999999999999999999975 3334444421 122222111 1234679999999999999999999999
Q ss_pred HhhhHHHHHHHHhhCCCCCchHhHHHHHhHHHHHHHHhhhhhhchhhhCCCCCCCCCCCCC--------CCCCchhHHHH
Q psy5584 573 FRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMD--------VHPGISHVFQT 644 (2014)
Q Consensus 573 ~R~HN~ia~~L~~~np~w~De~lFq~AR~iv~a~~Q~I~~~e~Lp~ilg~~~~~~~~y~~~--------~~p~is~eF~~ 644 (2014)
+|||||||++|+++||+|+||+||||||+||||+||||||+||||.|||.+. .++|||. ++|+|++||++
T Consensus 275 lREHNriA~~L~~~nP~W~DE~LFQeAR~Iv~A~~Q~Ity~EyLP~ilG~~~--~~~~dp~~~~~~~~~~~~~is~eF~~ 352 (587)
T 3nt1_A 275 LREHNRVCDILKQEHPEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHF--KLKFDPELLFNQQFQYQNRIASEFNT 352 (587)
T ss_dssp HHHHHHHHHHHHC-CTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSS--CCCCCGGGGTTSCCCSCCCCBHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhhheeeeHHHHHHHhcCcch--hcccCcccccCCCCCcCchHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999863 2445554 36788888886
Q ss_pred hHhhhccccCCCcccccCcccCCCcCCCCCCCCCCCCCccCCCCCccccchhhhhhccccCCCCCccccCcccCCCCCCC
Q psy5584 645 AAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVK 724 (2014)
Q Consensus 645 aa~RfgHs~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~r~ghs~~~~~~~~~~~~~~~~~~~~ 724 (2014)
| | |+||+|++.+.+.+
T Consensus 353 a-~-~~Hslip~~~~~~~-------------------------------------------------------------- 368 (587)
T 3nt1_A 353 L-Y-HWHPLLPDTFNIED-------------------------------------------------------------- 368 (587)
T ss_dssp H-T-CCGGGSCSSEEETT--------------------------------------------------------------
T ss_pred H-H-hccccCCcccccCC--------------------------------------------------------------
Confidence 5 4 56888876442210
Q ss_pred CCcccccccCCCCCCCCCccccccccccCcccccCcCcHHHHHHHHhhcccccccccccHHhhhccCCCCCCCCcchhhh
Q psy5584 725 GDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTNVMTYSTLEEILMGMASQLSEKEDAVLCSDIRDKLFGPNEFSRRDLGAL 804 (2014)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ll~g~~~q~a~~~d~~~~~~l~~~lf~~~~~~~~DL~al 804 (2014)
+.+.+.+.||++. ++.++++|++++||++|+|+++|.. ++. +..++||+|+
T Consensus 369 ------------------~~~~l~~~ff~p~-~~~~~gid~llrgl~~q~a~~~~~~-----~n~-----~~~~~DL~al 419 (587)
T 3nt1_A 369 ------------------QEYSFKQFLYNNS-ILLEHGLTQFVESFTRQIAGRVAGG-----RNV-----PIAVQAVAKA 419 (587)
T ss_dssp ------------------EEECHHHHTTCTH-HHHHHHHHHHHHHHHHSBCBCSSSS-----SCB-----CGGGHHHHHH
T ss_pred ------------------CcccHHHHhcCcc-ccchhhHHHHHHHHHHhhhhccccc-----ccC-----chHHHHHHHH
Confidence 1266777888874 4557899999999999999998631 111 3457999999
Q ss_pred hhhhhccCCCCChHHHHHhcCCCCCCChhhhhhhccccccccchHHHHHHHHHHhCCCCCCcccccccccCCC---CCCC
Q psy5584 805 NIMRGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESH---EGPG 881 (2014)
Q Consensus 805 nIqRgRd~Glp~yn~~R~~~gl~~~~~f~dl~~~~~~~~~~~~~~~~~~~L~~lY~~~~ddiDL~~G~l~E~~---~~~G 881 (2014)
|||||||||||+||+||++|||++++||+||+. + ++++++|+++|++ |||||||||+++|++ +.+|
T Consensus 420 nIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~--------~--~~~~~~L~~lY~~-~ddIDL~vGglaE~~~pG~~vG 488 (587)
T 3nt1_A 420 SIDQSREMKYQSLNEYRKRFSLKPYTSFEELTG--------E--KEMAAELKALYSD-IDVMELYPALLVEKPRPDAIFG 488 (587)
T ss_dssp HHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHS--------S--SHHHHHHHHHHSS-GGGCCHHHHHHHSCCSTTCSSC
T ss_pred HHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCC--------C--HHHHHHHHHHhCC-HhheeeecccccccCCCCccHH
Confidence 999999999999999999999999999999952 2 7899999999995 999999999999999 7899
Q ss_pred hHHHHHHHHH------HHHhhcCCcceeccCCCCCCCHHH-HHHHHhcchhhHhhhcCCCCccccccccccccCC
Q psy5584 882 PLFTNIILEQ------FTRLRDADRFWFENTENGMFTAAE-VEAIRKITLWDIIVNATDIGADAIQKNVFFWNAT 949 (2014)
Q Consensus 882 pt~~~ii~~q------f~rlr~gDRf~~en~~~~~ft~~q-l~ei~~~tl~~iic~n~~~~~~~iq~~~F~~~~~ 949 (2014)
|||+|| ..| |.++|+||||| +|+.||.+| +++||++||++|||+|++. +|.++|..++.
T Consensus 489 pTf~ci-~~qf~l~~~~~~~r~gDrfw----~~~~Ft~~qgl~~I~~~sL~~lic~N~~~----~p~~~F~~p~~ 554 (587)
T 3nt1_A 489 ETMVEL-GAPFSLKGLMGNPICSPQYW----KPSTFGGEVGFKIINTASIQSLICNNVKG----CPFTSFNVQDP 554 (587)
T ss_dssp HHHHHH-HHHHHHHHHHTSGGGSTTTS----SGGGGTSHHHHHHHHTCCHHHHHHHHSTT----CCCCCSBCC--
T ss_pred HHHHHH-HHHHHHHHHhcCcccCCccc----CcCccChHHHHHHHHHCCHHHHHHhCCCC----CCcceeECCCc
Confidence 999999 666 48999999999 457899877 9999999999999999984 89999999885
No 4
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=100.00 E-value=2.4e-84 Score=829.78 Aligned_cols=429 Identities=16% Similarity=0.227 Sum_probs=337.9
Q ss_pred ccccccccc--cccccccccCCCCcc-ccccccCCccccccccCCCCccccccccccCCcccCCCCCceeeeecCccccc
Q psy5584 349 MAVREWLHA--NHKRFVKIRLGPETC-LHTVDRKGEKLRTVNFKNCDTVTIEESQFSTNREFQHQAKTSIEDFYGDGQVV 425 (2014)
Q Consensus 349 ~~~~~~~~a--~~~~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~t~~~~~fg~gq~i 425 (2014)
-.+|+||.+ ++++.+.+|+....| .|+....+.. ||+|+.|+... ..+....+++++.|+|+++|| |||
T Consensus 103 ~~~pswgs~~n~t~~~R~lpp~y~Dg~~p~~~~~~~~-----LP~pr~vs~~l-~~~~~~~p~~~~~s~l~~~fg--Qfi 174 (553)
T 1q4g_A 103 HDYISWESFSNVSYYTRILPSVPRDCPTPMGTKGKKQ-----LPDAEFLSRRF-LLRRKFIPDPQGTNLMFAFFA--QHF 174 (553)
T ss_dssp CSSCCHHHHHCTTBCEESSCCCCTTCSBTTBSSSCSS-----CCCHHHHHHHH-TBCSSCCBCTTCBBHHHHHHH--HHH
T ss_pred cCCCCCCCCCCCCceeeccCCCccCCCCcccCCCCCC-----CCCHHHHHHHH-hccCCCCCCCCCccHHHHHHH--HHH
Confidence 467899965 355444443333223 1221112233 55667888532 223345567889999999999 999
Q ss_pred ccccccCCCCCCCCcceeeccCCCCccccCCCCCCceeecccCcccCCCCCCCCCcccccccccccccCCcCCCCCHHHH
Q psy5584 426 SSEIVMASESGCPIEMHEIEIEKCDEMYDKDCEGGKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWL 505 (2014)
Q Consensus 426 ~hDi~~~~~~~c~~~~~~i~i~~~Dp~~~~~~~~~~c~~f~Rs~~~~~~g~~~~~~r~q~N~~Ts~lD~S~vYGs~~~~~ 505 (2014)
+|||+.|+ |. .+.+|+|++|||||||+||||+++++
T Consensus 175 ~HDi~~t~-----------------~~---------------------------~~~~~~N~~T~~lD~S~vYGs~~~~~ 210 (553)
T 1q4g_A 175 THQFFKTS-----------------GK---------------------------MGPGFTKALGHGVDLGHIYGDNLERQ 210 (553)
T ss_dssp HTTTCCBC-----------------TT---------------------------TCTTBBSCTTCSSSCHHHHCSSHHHH
T ss_pred hhhhhccc-----------------cc---------------------------cchhhcccccccccccccCCCCHHHH
Confidence 99998873 10 01256899999999999999999999
Q ss_pred HhhhcCCCCccccCC--CCCCCCC-CCCCCCCCCCCCCCcccccccccccccCCcccccchhHHHHHHHHHhhhHHHHHH
Q psy5584 506 NAMRSFTNGSLATDA--SGKMPVK-NTMRVPLFNNPVPHSLRTLSPERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQ 582 (2014)
Q Consensus 506 ~~LR~~~~G~L~~~~--~~~~p~~-~~~~lp~~~~~~~~~~~~~~~~~~~~~Gd~R~ne~p~l~~lh~lf~R~HN~ia~~ 582 (2014)
++||+|++|+|+++. +..+||. ...++++..++. .....||.+||.|+||+|+|++|||||+|||||||++
T Consensus 211 ~~LR~~~~G~Lk~~~~~g~~~~P~~~~~~~~~~~~~~------~~~~~cf~~GD~R~ne~p~L~~lhtlflReHNria~~ 284 (553)
T 1q4g_A 211 YQLRLFKDGKLKYQMLNGEVYPPSVEEAPVLMHYPRG------IPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDL 284 (553)
T ss_dssp HHHBCSSTTCBCCEEETTEEECCBTTTSCCCCCCCTT------CCGGGSBCCSSTTGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhcCCCCEecccCCCCccCCCccCCCCCcccCCCC------CCchhccccCccccCcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999863 2234432 223334332221 1246799999999999999999999999999999999
Q ss_pred HHhhCCCCCchHhHHHHHhHHHHHHHHhhhhhhchhhhCCCCCCCCCCCCC--------CCCCchhHHHHhHhhhccccC
Q psy5584 583 IEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMD--------VHPGISHVFQTAAFRFGHSLI 654 (2014)
Q Consensus 583 L~~~np~w~De~lFq~AR~iv~a~~Q~I~~~e~Lp~ilg~~~~~~~~y~~~--------~~p~is~eF~~aa~RfgHs~v 654 (2014)
|+++||+|+||+||||||+||||+||||||+||||.|+|... -+.|||. ++|+|++||++ ||| |||||
T Consensus 285 L~~~nP~W~DE~LFQeAR~Iv~a~~Q~I~~~EyLp~ilg~~~--~~~~dp~~~~~~~~~~~~~is~EF~~-ayR-~Hsli 360 (553)
T 1q4g_A 285 LKAEHPTWGDEQLFQTARLILIGETIKIVIEEYVQQLSGYFL--QLKFDPELLFGAQFQYRNRIAMEFNQ-LYH-WHPLM 360 (553)
T ss_dssp HHHHCTTCCHHHHHHHHHHHHHHHHHHHHHHTHHHHHHCCSS--CCCCCGGGGTTSCCCCCCCCBHHHHH-HTC-CGGGS
T ss_pred HHHhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcc--ccccCcccccCCCcccCcchhHHHHH-Hhc-ccccC
Confidence 999999999999999999999999999999999999999752 1345554 56777888875 477 57777
Q ss_pred CCcccccCcccCCCcCCCCCCCCCCCCCccCCCCCccccchhhhhhccccCCCCCccccCcccCCCCCCCCCcccccccC
Q psy5584 655 PPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSN 734 (2014)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~r~ghs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 734 (2014)
++.+.+.+
T Consensus 361 p~~~~~~~------------------------------------------------------------------------ 368 (553)
T 1q4g_A 361 PDSFRVGP------------------------------------------------------------------------ 368 (553)
T ss_dssp CSSEEETT------------------------------------------------------------------------
T ss_pred CcccccCC------------------------------------------------------------------------
Confidence 76432110
Q ss_pred CCCCCCCCccccccccccCcccccCcCcHHHHHHHHhhcccccccccccHHhhhccCCCCCCCCcchhhhhhhhhccCCC
Q psy5584 735 WWDSTNVDPAIRLCSNWWDSTNVMTYSTLEEILMGMASQLSEKEDAVLCSDIRDKLFGPNEFSRRDLGALNIMRGRDNGI 814 (2014)
Q Consensus 735 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ll~g~~~q~a~~~d~~~~~~l~~~lf~~~~~~~~DL~alnIqRgRd~Gl 814 (2014)
..+.+.+.||++. ++.+.+++++++||+.|+++++| ++++. +..++||+++||||||||||
T Consensus 369 --------~~~~l~~~ff~~~-~~~~~g~~~ll~g~~~q~a~~~~-----~~~n~-----~~~~~dL~alnIqRgRDhGl 429 (553)
T 1q4g_A 369 --------QDYSYEQFLFNTS-MLVDYGVEALVDAFSRQPAGRIG-----GGRNI-----DHHILHVAVDVIKESRVLRL 429 (553)
T ss_dssp --------EEECHHHHTTCSS-HHHHHCHHHHHHHHHHSBCBCSS-----SSSCB-----CTTTHHHHHHHHHHHHHTTC
T ss_pred --------CcccHHHHhcCch-hhhcccHHHHHHHhhhchhhccc-----ccccC-----cHHHHHHHHHHHHHHHhhCC
Confidence 1256778888885 44568999999999999999984 12221 23469999999999999999
Q ss_pred CChHHHHHhcCCCCCCChhhhhhhccccccccchHHHHHHHHHHhCCCCCCcccccccccCCC---CCCChHHHHHHHH-
Q psy5584 815 ADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESH---EGPGPLFTNIILE- 890 (2014)
Q Consensus 815 p~yn~~R~~~gl~~~~~f~dl~~~~~~~~~~~~~~~~~~~L~~lY~~~~ddiDL~~G~l~E~~---~~~Gpt~~~ii~~- 890 (2014)
|+||+||++|||+++++|+||+. | ++++++|+++|++ |||||||||+|+|++ +.+||||+|||++
T Consensus 430 p~YN~~R~~~gL~~~~tf~dl~~--------d--~~~~~~L~~lY~~-~ddiDL~vG~laE~~~~G~~~Gpt~~~ii~~~ 498 (553)
T 1q4g_A 430 QPFNEYRKRFGMKPYTSFQELTG--------E--KEMAAELEELYGD-IDALEFYPGLLLEKCHPNSIFGESMIEMGAPF 498 (553)
T ss_dssp CCHHHHHHHTTCCCCSSHHHHHS--------S--SHHHHHHHHHHSS-GGGCCHHHHHHHSCBCTTCSSBHHHHHHHHHH
T ss_pred CcHHHHHHHcCCCCCCCHHHhcC--------C--HHHHHHHHHHhcC-hhhccccccccccccCCCCCccHHHHHHHHHH
Confidence 99999999999999999999952 2 7999999999995 999999999999998 6899999999998
Q ss_pred HHHHhh---cCCcceeccCCCCCCCHHHHHHHHh-cchhhHhhhcCCCCccccccccccccC
Q psy5584 891 QFTRLR---DADRFWFENTENGMFTAAEVEAIRK-ITLWDIIVNATDIGADAIQKNVFFWNA 948 (2014)
Q Consensus 891 qf~rlr---~gDRf~~en~~~~~ft~~ql~ei~~-~tl~~iic~n~~~~~~~iq~~~F~~~~ 948 (2014)
||+||+ +|||||| +|+.||++|+.||+| +||++|||+|++ .||.++|.+++
T Consensus 499 ~~~~l~~~~~~d~~~~---~~~~ft~~ql~ei~~~~sla~iic~n~~----~~p~~~F~~p~ 553 (553)
T 1q4g_A 499 SLKGLLGNPICSPEYW---KASTFGGEVGFNLVKTATLKKLVCLNTK----TCPYVSFHVPD 553 (553)
T ss_dssp HHHHHHTSGGGSTTTC---SGGGGTSHHHHHHHHTCCHHHHHHTTSS----SCCCCCSBCCC
T ss_pred HHHHHhhCcCCCcccc---CCCCcCHHHHHHHHHhCCHHHHHHHcCC----CCCcccccCCC
Confidence 799997 5999888 368999999999977 599999999997 79999998764
No 5
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C* 1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Probab=99.97 E-value=5.6e-33 Score=348.81 Aligned_cols=235 Identities=23% Similarity=0.335 Sum_probs=191.8
Q ss_pred hhhHHHHHHHHHHhCCccCCcccccccCcccccccccCHHHHHhhhCCCCChHHHHHHHHhhccCC-----CCcccHHHH
Q psy5584 18 KLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDG-----DGRISFQEF 92 (2014)
Q Consensus 18 ~l~~~~~~~~~~~~~l~~~~~~~~~~y~~~v~ps~~i~~~EF~~al~~rf~~s~~~~~f~~fD~d~-----~g~I~f~Ef 92 (2014)
=|+.+++...|+++ .++...|+++++|+++ +|| .| ++||+|++++..+.+.|.+. .+.+.+.++
T Consensus 184 yLp~ilG~~~~~~~------~~~~~gy~~~v~p~is---nEF-~a-afRfgHsli~~~~~~~~~~~~~~~~~~~~~l~~~ 252 (466)
T 1d2v_C 184 YLPLVLGPTAMRKY------LPTYRSYNDSVDPRIA---NVF-TN-AFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLSRV 252 (466)
T ss_dssp THHHHHHHHHHHHH------SCCCCCCCTTSCCSCB---HHH-HH-HGGGGGGGCCSEEECBCTTSSBCSSCSEEEGGGT
T ss_pred HHHHHhCchhhhhc------CCcccCCCCCCCCchh---HHH-HH-HHhcccccCchhhccccccccccCCCCceeHHHH
Confidence 56677887777775 2345789999999999 999 77 89999999999999888764 257999999
Q ss_pred HhhhhhccCCCHHHHHHHHH-h------hccCCCCccccHHHHHHHH--------HHH--HHhhcC---CCCC-------
Q psy5584 93 LDTVVLFSRGHTEDKLRIIF-D------MCDNDRNGVIDKGELAEML--------RSL--VEMART---SFPS------- 145 (2014)
Q Consensus 93 i~~~~~l~~~~~~d~l~~~f-~------~~D~d~~G~Is~~El~~~L--------~dL--~niqrg---glp~------- 145 (2014)
++++..+...+..+.+..++ . .+|...+ +|+++.| .|| +||||| |||+
T Consensus 253 ~f~~~~~~~~~g~d~~lrgl~~q~a~~~~~d~~l~-----~~l~~~lf~~~~~~~~DL~alnIqRgRDhGlp~YN~~R~~ 327 (466)
T 1d2v_C 253 FFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAV-----DEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRF 327 (466)
T ss_dssp TTCHHHHHHTTCHHHHHHHHHHSEEECCBTTBCSC-----HHHHTCBTGGGSSSCBCHHHHHHHHHHHTTCCCHHHHHHH
T ss_pred hcChHHHhhccCchHHHHHHhhCccccccCchhhh-----HHHHHHhhcccCccchhHHHHHHHHHHHcCCCCHHHHHHH
Confidence 99886654443345554553 2 1344444 7888765 466 999999 9999
Q ss_pred -C-CCchh-------H-HHHHHHhhhhcCCCCcchhhhhhccccccC---CCCchhhhHHHHHHHHhhcccccccccCCC
Q psy5584 146 -G-GAATT-------V-VKIVLRGYYSYGNSLDNIDLYIGGMLESHE---GPGPLFTNIILEQFTRLRDADRFWFENTEN 212 (2014)
Q Consensus 146 -~-~~a~~-------i-~~~~l~~~~~~~~~~~~idl~~gg~~E~~~---~~gp~~~~i~~~qf~r~r~gdrf~~e~~~~ 212 (2014)
| +++++ + +++++++|++.|++|+|||||||||+|.+. .+||||+|||++||.|||+|||||||| |
T Consensus 328 ~gL~~~~tf~dl~~~~~d~~~~~~L~~lY~~~d~vDL~vG~laE~~~~G~~~Gptf~~ii~~qf~rLr~gDRf~yen--~ 405 (466)
T 1d2v_C 328 CGLPQPETVGQLGTVLRNLKLARKLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWEN--E 405 (466)
T ss_dssp TTCCCCCSHHHHHHHHTCHHHHHHHHHHHSSGGGSCHHHHHHHSCCCTTCSSCHHHHHHHHHHHHHHHHTCTTCTTS--T
T ss_pred cCCCCCCCHHHHhhccCCHHHHHHHHHHhCCccccceeecccccccCCCCCCCHHHHHHHHHHHHHHHhcCcccccC--C
Confidence 5 55555 2 357889999999999999999999999985 399999999999999999999999998 5
Q ss_pred CCCCHHHHHHHHhccchhhhhccCcccccccccc-cccccCCCCCCCccccccCCCcCCCCCCCCCCCCcc
Q psy5584 213 GMFTAAEVEAIRKITLWDIIVNATDIGADAIQKN-VFFWNATDPCPQPAQLNASMMMPCSYLKGFDYFEPV 282 (2014)
Q Consensus 213 ~~ft~~ql~~i~~~~l~~i~c~~~~~~~~~~q~~-~f~~~~~~~c~~~~~~~~~~~~~c~~~~~~d~~~~~ 282 (2014)
+.||++|++|||++||++|||+|++ ++.||++ ||..++. .|..++|+.++.+|+-.|.
T Consensus 406 ~~ft~~ql~ei~~~sl~~iic~n~~--~~~iq~~~~F~~~~~----------~n~~~~C~~ip~~dl~~w~ 464 (466)
T 1d2v_C 406 GVFSMQQRQALAQISLPRIICDNTG--ITTVSKNNIFMSNSY----------PRDFVNCSTLPALNLASWR 464 (466)
T ss_dssp TTSCHHHHHHHTTCCHHHHHHHHSS--CCEEECSCTTTCCST----------TTTEEEGGGSCCCCCGGGS
T ss_pred CcccchhhHHHHhCCHHHHHHhcCC--CcccCCCccccCCCC----------CCCCcCcccCCCCCchhhc
Confidence 8999999999999999999999996 6799999 9998652 3567899999999987664
No 6
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase, phenyl isothiocyanat iodide, PEG, edman reagent; HET: SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A* 2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A* 3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A* 3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Probab=99.97 E-value=2.4e-33 Score=358.72 Aligned_cols=223 Identities=23% Similarity=0.393 Sum_probs=180.6
Q ss_pred ccccCcccccccccCHHHHHhhhCCCCChHHHHHHHHhhccCC-----CCcccHHHHHhhhhhcc-CCCHHHHHHHHHhh
Q psy5584 41 RDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDG-----DGRISFQEFLDTVVLFS-RGHTEDKLRIIFDM 114 (2014)
Q Consensus 41 ~~~y~~~v~ps~~i~~~EF~~al~~rf~~s~~~~~f~~fD~d~-----~g~I~f~Efi~~~~~l~-~~~~~d~l~~~f~~ 114 (2014)
...|+++++|+++ +|| .| ++||+|++++..+.++|.+. .+.+.+.++++++..+. .++.+..++.....
T Consensus 328 ~~gY~~~v~p~i~---neF-~a-afRfgHsli~~~~~~~~~~~~~~~~~~~~~L~~~ff~~~~~~~~~gid~llrGl~~q 402 (595)
T 3q9k_A 328 YQGYNNSVDPRIS---NVF-TF-AFRFGHMEVPSTVSRLDENYQPWGPEAELPLHTLFFNTWRIIKDGGIDPLVRGLLAK 402 (595)
T ss_dssp CCCCCTTSCCCCB---TTH-HH-HGGGGGGGCCSEEECBCTTSSBCSTTCEEEGGGGBTCCHHHHTTTCSHHHHHHHHHS
T ss_pred ccCCCCCCCCccH---HHH-HH-HHHhHHhhCcchhhccCccccccCCCCceeHHHHhcChHHhhhccchHHHHHHHhhC
Confidence 4689999999999 999 77 89999999999999888764 25899999999998665 44554444443222
Q ss_pred ccC--CCCccccHHHHHHHH---------HHH--HHhhcC---CCCC--------C-CCchh-------HH-HHHHHhhh
Q psy5584 115 CDN--DRNGVIDKGELAEML---------RSL--VEMART---SFPS--------G-GAATT-------VV-KIVLRGYY 161 (2014)
Q Consensus 115 ~D~--d~~G~Is~~El~~~L---------~dL--~niqrg---glp~--------~-~~a~~-------i~-~~~l~~~~ 161 (2014)
-.. ..|..++ +||++.| .|| +||||| |||+ | .++++ ++ ++++++|.
T Consensus 403 ~a~~~~~d~~~~-~~l~~~Lf~~~~~~~g~DL~alnIqRgRdhGlp~yn~~R~~~gl~~~~sf~dl~~~~~~~~~~~~l~ 481 (595)
T 3q9k_A 403 KSKLMNQDKMVT-SELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGFCGLSQPKTLKGLQTVLKNKILAKKLM 481 (595)
T ss_dssp EEECCCTTSCSC-HHHHTCEECTTSCSEEECHHHHHHHHHHHTTCCCHHHHHHHTTCCCCCSHHHHHHHHTCHHHHHHHH
T ss_pred cccccCCCccCC-HHHHHHhccCCCccccccHHHHHHHHHHHhCCCCHHHHHHHcCCCCCCCHHHHhhhcCcHHHHHHHH
Confidence 111 2223333 7888755 466 999999 9999 5 55554 22 55668899
Q ss_pred hcCCCCcchhhhhhccccccCC---CCchhhhHHHHHHHHhhcccccccccCCCCCCCHHHHHHHHhccchhhhhccCcc
Q psy5584 162 SYGNSLDNIDLYIGGMLESHEG---PGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDI 238 (2014)
Q Consensus 162 ~~~~~~~~idl~~gg~~E~~~~---~gp~~~~i~~~qf~r~r~gdrf~~e~~~~~~ft~~ql~~i~~~~l~~i~c~~~~~ 238 (2014)
..|++++|||||||||+|++++ +||||+|||++||.|||+||||||||. |.||++||+||||+||++|||+|++
T Consensus 482 ~lY~~~d~iDl~vG~l~E~~~~g~~~Gptf~~ii~~qf~~lr~gDRf~yen~--~~ft~~ql~ei~~~sla~iic~n~~- 558 (595)
T 3q9k_A 482 DLYKTPDNIDIWIGGNAEPMVERGRVGPLLACLLGRQFQQIRDGDRFWWENP--GVFTEKQRDSLQKVSFSRLICDNTH- 558 (595)
T ss_dssp HHHSSGGGSCHHHHHHHSCCCTTBSSCHHHHHHHHHHHHHHHHTCTTCTTSB--TTBCHHHHHHHTTCCHHHHHHHHSS-
T ss_pred HHhCCccccceeecccccccCCCCCcCHHHHHHHHHHHHHHHhcCCCeecCC--CcCCHHHHHHHHhCCHHHHHhcCCC-
Confidence 9999999999999999999753 999999999999999999999999985 8999999999999999999999976
Q ss_pred cccccccccccccCCCCCCCccccccCCCcCCCCCCCCCCCCccc
Q psy5584 239 GADAIQKNVFFWNATDPCPQPAQLNASMMMPCSYLKGFDYFEPVS 283 (2014)
Q Consensus 239 ~~~~~q~~~f~~~~~~~c~~~~~~~~~~~~~c~~~~~~d~~~~~~ 283 (2014)
++.||++||..+. ..|..++|++++.+|+-.|.+
T Consensus 559 -i~~vq~~~F~~~~----------~~n~~v~C~~ip~~dL~~W~~ 592 (595)
T 3q9k_A 559 -ITKVPLHAFQANN----------YPHDFVDCSTVDKLDLSPWAS 592 (595)
T ss_dssp -CCEEESSTTSCCC----------TTTTEEEGGGSCCCCCGGGCC
T ss_pred -cccccHhhccCCC----------CCCCCccCCCCCCCChHHhhC
Confidence 6899999999643 245689999999999977654
No 7
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.94 E-value=1.9e-26 Score=270.90 Aligned_cols=223 Identities=17% Similarity=0.243 Sum_probs=180.5
Q ss_pred eeeEeEEEEEEEcCCCEEEEEEecCC---CCcccCCCEEEEEecCCCC--CcccccccCCCCCCCeEEEEEEec------
Q psy5584 1730 KYMALDILETELLPSDVIKIRFYRPP---NFTYHSGQWVRLACTAFKN--AAYHSFTLTSAPHENFLSCHIKAQ------ 1798 (2014)
Q Consensus 1730 ~~~~~~v~~v~~l~~~v~~l~~~~p~---~~~~~pGQyv~L~~p~~~~--~e~HPFTIaS~p~~~~l~l~Ir~~------ 1798 (2014)
.+..++|++++.+++++++++|+.|. ...|+|||||+|.+|..+. .++|||||+|+|.++.++|+||..
T Consensus 2 ~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~~~~~i~vk~~~~~~~~ 81 (243)
T 4eh1_A 2 DGRTFVVREKQVESAYVTSFVLVPADGGAVLDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNGREYRISVKREGVGSDN 81 (243)
T ss_dssp CCEEEEEEEEEECSSSEEEEEEEESSCSCCCCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCCSSCEEEEEECTTTTSSS
T ss_pred CcEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCcCCCCEEEEEEecCCCccccceeeEeccCCCCCeEEEEEEEeecCCCC
Confidence 34678899999999999999999875 3679999999999986543 378999999999889999999999
Q ss_pred -CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccE
Q psy5584 1799 -GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKK 1877 (2014)
Q Consensus 1799 -G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~k 1877 (2014)
|.+|+.|++.+..+. ++.|.||||.+... ..++++|||||||||||++++++++.... ..+
T Consensus 82 ~G~~S~~l~~~l~~G~--------~v~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~~--------~~~- 143 (243)
T 4eh1_A 82 PGLVSHYLHNNVKVGD--------SVKLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQN--------KSG- 143 (243)
T ss_dssp CCHHHHHHHHHCCTTC--------EEEEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHTT--------CCS-
T ss_pred CCeehhHHHhcCCCCC--------EEEEEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHcC--------CCe-
Confidence 889999987655543 89999999998865 67899999999999999999999998752 123
Q ss_pred EEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCC
Q psy5584 1878 VYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRP 1957 (2014)
Q Consensus 1878 V~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRP 1957 (2014)
|+|+|++|+.+++. +.++|+++.+.. .+++++++++...... +.||+
T Consensus 144 v~l~~~~r~~~~~~-~~~el~~l~~~~---~~~~~~~~s~~~~~~~-----------------------------~~g~~ 190 (243)
T 4eh1_A 144 VTYLYACNSAKEHT-FAQETAQLIAQQ---GWMQQVWYRDESADDV-----------------------------LQGEM 190 (243)
T ss_dssp EEEEEEESSGGGCT-THHHHHHHHHHH---TCEEEEEESSCCCTTC-----------------------------EESSC
T ss_pred EEEEEEeCChhhhh-HHHHHHHHHHhC---CeEEEEEEccCCCccc-----------------------------ccCCc
Confidence 99999999999875 678888887653 6788888887432110 22666
Q ss_pred CHHHHHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1958 DMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1958 d~~~il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
+...+ ..+. ....||+|||++|++++++.+++. |++.-++|+|.||
T Consensus 191 ~~~~~------~~~~-~~~~vyvCGp~~m~~~v~~~l~~~----g~~~~~i~~E~F~ 236 (243)
T 4eh1_A 191 QLAEL------ILPI-EDGDFYLCGPIGFMQYVVKQLLAL----GVDKARIHYEVFG 236 (243)
T ss_dssp CCTTS------CCCT-TTCEEEEEECHHHHHHHHHHHHHH----TCCGGGEEEEECC
T ss_pred cHHHe------eccC-CCcEEEEECCHHHHHHHHHHHHHc----CCCHHHEEEeccC
Confidence 54332 1122 356799999999999999999988 6777789999997
No 8
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.94 E-value=3.3e-26 Score=270.05 Aligned_cols=227 Identities=17% Similarity=0.310 Sum_probs=180.3
Q ss_pred eeEeEEEEEEEcCCCEEEEEEec-C-C----CCcccCCCEEEEEecCCCCCcccccccCCCCC-CCeEEEEEEec--CCc
Q psy5584 1731 YMALDILETELLPSDVIKIRFYR-P-P----NFTYHSGQWVRLACTAFKNAAYHSFTLTSAPH-ENFLSCHIKAQ--GPW 1801 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~-p-~----~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~-~~~l~l~Ir~~--G~~ 1801 (2014)
.+.++|++++.+++++++++|+. | . .+.|+|||||.|.+|. ..++|||||+|.|. ++.++|+||.. |.+
T Consensus 10 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~--~~~~R~ySi~s~~~~~~~l~i~vk~~~~G~~ 87 (250)
T 1tvc_A 10 SFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG--TDVSRSYSPANLPNPEGRLEFLIRVLPEGRF 87 (250)
T ss_dssp EEEEEBCCCEEEETTEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS--CSSSEEECCBCCSSSSCCEEEEECCCTTSSS
T ss_pred eEEEEEEEEEEcCCCeEEEEEEecCCCCcccccCcCCCcEEEEEeCC--CccccccccCCCCCCCCeEEEEEEECCCCCc
Confidence 46788889999999999999998 7 5 5789999999999875 36899999999986 68899999999 999
Q ss_pred cHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEE
Q psy5584 1802 TWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFL 1881 (2014)
Q Consensus 1802 T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~li 1881 (2014)
|+.|++.+..+ ..+.|.||||.+......++++|||||||||||++++++++..... .++|+|+
T Consensus 88 s~~l~~~l~~G--------d~v~v~gP~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~~--------~~~v~l~ 151 (250)
T 1tvc_A 88 SDYLRNDARVG--------QVLSVKGPLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEWTA--------PNETRIY 151 (250)
T ss_dssp HHHHHHHSSSS--------SEEEEEEEECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHHTC--------CSCEEEE
T ss_pred hHHHHhcCCCC--------CEEEEEcCccccccCccCCceEEEEEeccCHHHHHHHHHHHHhcCC--------CceEEEE
Confidence 99998655544 3899999999998654456899999999999999999999987531 2589999
Q ss_pred EEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHH
Q psy5584 1882 WICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSS 1961 (2014)
Q Consensus 1882 W~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~ 1961 (2014)
|++|+.+++ ++.++|+++.+.. +.+++++++|+..+. +.| +.||++ +.
T Consensus 152 ~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~-----------------------~~g-----~~g~v~-~~ 199 (250)
T 1tvc_A 152 FGVNTEPEL-FYIDELKSLERSM--RNLTVKACVWHPSGD-----------------------WEG-----EQGSPI-DA 199 (250)
T ss_dssp EECSSSTTC-CCHHHHHHHHHHS--SSCEEEECCSSCSSC-----------------------CSS-----SSSSSS-HH
T ss_pred EEeCCHHHh-hhHHHHHHHHHhC--CCeEEEEEeccCCCC-----------------------cCC-----ccceeh-HH
Confidence 999999988 5788899887643 457888777764211 112 126665 23
Q ss_pred HHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1962 FLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1962 il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
+.+.+. ... ....||+|||++|++++++.+++. |++.-++|.|.|+
T Consensus 200 l~~~~~-~~~--~~~~vyvCGp~~m~~~v~~~l~~~----G~~~~~i~~e~F~ 245 (250)
T 1tvc_A 200 LREDLE-SSD--ANPDIYLCGPPGMIDAACELVRSR----GIPGEQVFFEKFL 245 (250)
T ss_dssp HHHHHH-HSS--SSSEEEEESSHHHHHHHHHHHHHH----CCCCSEEEECCCS
T ss_pred HHhhhh-ccc--CCcEEEEeCCHHHHHHHHHHHHHc----CCCHHHEEEEecc
Confidence 333332 211 245699999999999999999987 7778899999996
No 9
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.94 E-value=3.8e-26 Score=266.44 Aligned_cols=224 Identities=17% Similarity=0.242 Sum_probs=175.1
Q ss_pred eEeEEEEEEEcCCCEEEEEEecCCCCcccCCCEEEEEecCCCCCcccccccCCCCCC-CeEEEEEEec--CCccHHHHhh
Q psy5584 1732 MALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHE-NFLSCHIKAQ--GPWTWKLRNY 1808 (2014)
Q Consensus 1732 ~~~~v~~v~~l~~~v~~l~~~~p~~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~-~~l~l~Ir~~--G~~T~~L~~~ 1808 (2014)
..++|++++.+++++++++|+.|..+.|+||||+.|.+|. .++|||||+|+|.+ +.++|+||.. |++|..+.+.
T Consensus 3 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~---~~~R~ySi~s~~~~~~~l~l~i~~~~~G~~s~~~~~~ 79 (232)
T 1qfj_A 3 LSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDE---RDKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDR 79 (232)
T ss_dssp EEEEEEEEEESSSSCEEEEEEESSCCCCCTTCEEEEESSS---SCEEEEECCSCTTSTTCEEEEEC------CCHHHHHH
T ss_pred eEEEEEEEEecCCCEEEEEEecCCCCCcCCCCEEEEECCC---CceeeeecCCCCCCCCcEEEEEEEccCCchhHHHHHh
Confidence 4678999999999999999998878899999999999985 58999999999975 6899999997 4688887776
Q ss_pred hccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcc
Q psy5584 1809 FDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHK 1888 (2014)
Q Consensus 1809 ~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~ 1888 (2014)
++.+. ++.|.||||.+......++++|||||||||||++++++++..... .++|+|+|++|+.+
T Consensus 80 l~~Gd--------~v~v~gP~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~--------~~~v~l~~~~r~~~ 143 (232)
T 1qfj_A 80 ILKDH--------QIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNP--------NRDITIYWGGREEQ 143 (232)
T ss_dssp HHHHS--------EEEEEEEECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHHCT--------TCCEEEEEEESSGG
T ss_pred CCCCC--------EEEEeCCccceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhcCC--------CCcEEEEEeeCCHH
Confidence 66553 899999999987654457899999999999999999999987632 25899999999999
Q ss_pred cHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHH
Q psy5584 1889 HFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQK 1968 (2014)
Q Consensus 1889 ~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~ 1968 (2014)
++. +.++|+++++.. ++++++.++++..+. +.| +.||++ +.+.+
T Consensus 144 ~~~-~~~el~~l~~~~--~~~~~~~~~s~~~~~-----------------------~~g-----~~g~v~-~~~~~---- 187 (232)
T 1qfj_A 144 HLY-DLCELEALSLKH--PGLQVVPVVEQPEAG-----------------------WRG-----RTGTVL-TAVLQ---- 187 (232)
T ss_dssp GCT-THHHHHHHHHHC--TTEEEEEEESSCCTT-----------------------CCS-----EESCHH-HHHHH----
T ss_pred Hhh-hHHHHHHHHHHC--CCeEEEEEEcCCCCC-----------------------cCC-----ceeeHH-HHHHH----
Confidence 884 778888887653 468888888774221 111 125544 22222
Q ss_pred hCCCCCeEEEEEeCChhhHHHHHHHH-HhhhcCCCCCeEEEEEecCC
Q psy5584 1969 KHSYVSKIGVFSCGPRPLTKSIMSAC-EEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1969 ~~~~~~~v~V~vCGP~~m~~~vr~a~-~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
...+.....||+|||++|++++++.+ .+. |++.-++|.|.|+
T Consensus 188 ~~~~~~~~~vyvCGp~~m~~~v~~~l~~~~----g~~~~~i~~E~F~ 230 (232)
T 1qfj_A 188 DHGTLAEHDIYIAGRFEMAKIARDLFCSER----NAREDRLFGDAFA 230 (232)
T ss_dssp HCSCCTTCEEEEESCHHHHHHHHHHHHHHS----CCCGGGEECTHHH
T ss_pred hcCCccccEEEEECCHHHHHHHHHHHHHHc----CCCHHHEEEeeec
Confidence 22222456799999999999999999 776 7788889999984
No 10
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.93 E-value=3.2e-25 Score=267.60 Aligned_cols=234 Identities=18% Similarity=0.391 Sum_probs=179.8
Q ss_pred eeeEeEEEEEEEcCCCEEEEEEecCC--CCcccCCCEEEEEecCC-----------------------------CCCccc
Q psy5584 1730 KYMALDILETELLPSDVIKIRFYRPP--NFTYHSGQWVRLACTAF-----------------------------KNAAYH 1778 (2014)
Q Consensus 1730 ~~~~~~v~~v~~l~~~v~~l~~~~p~--~~~~~pGQyv~L~~p~~-----------------------------~~~e~H 1778 (2014)
..+.++|++++.+++++++|+|..|. .+.|+|||||.|.+|.. +...+|
T Consensus 8 ~~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~R 87 (290)
T 2r6h_A 8 KEWECEVLSNKNVSTFIKEFVVKLPEGETMNFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVR 87 (290)
T ss_dssp CEEEEEEEEEEESSSSEEEEEEECSTTCCCCCCTTCEEEEEECSEEEEGGGCCCCTTTHHHHHHTTGGGCEEEECSCEEE
T ss_pred eEEEEEEEEeeecCCCeEEEEEEcCCCCccccCCCceEEEEcccccccccccccchhhcccccccccccccccCCCCcce
Confidence 34678999999999999999999875 67899999999999852 246789
Q ss_pred ccccCCCCCC-CeEEEEEEe-----------------cCCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCc
Q psy5584 1779 SFTLTSAPHE-NFLSCHIKA-----------------QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFE 1840 (2014)
Q Consensus 1779 PFTIaS~p~~-~~l~l~Ir~-----------------~G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~ 1840 (2014)
||||+|+|.+ +.++|+||. .|.+|+.|.+ ++.+ .++.|.||||.+... ...+
T Consensus 88 ~ySi~s~~~~~~~l~l~v~~~~~~~~~~~~~~~~~~~~G~~S~~l~~-l~~G--------d~v~v~gP~G~f~~~-~~~~ 157 (290)
T 2r6h_A 88 AYSMANYPAEGNIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFS-LKPG--------DKVMMSGPYGDFHIQ-DTDA 157 (290)
T ss_dssp EEECCSCTTCCSEEEEEEECCCCCEETTTTEECTTCCCCHHHHHHTT-CCTT--------CEEEEEEEECCCCCC-SSSC
T ss_pred eeeccCCCCCCCEEEEEEEEeccccccccccccccCCCcchhhHHhc-CCCC--------CEEEEEecccCCcCC-CCCC
Confidence 9999999964 789999996 4778888876 4333 389999999998754 4678
Q ss_pred eEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCC
Q psy5584 1841 VAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFH 1920 (2014)
Q Consensus 1841 ~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~ 1920 (2014)
++|||||||||||++|+|++++..... .++|+|+|++|+.+++ +|.++|+++++.. ..+++++++++...
T Consensus 158 ~~vliagGtGitP~~s~l~~~~~~~~~-------~~~v~l~~~~r~~~d~-~~~~el~~l~~~~--~~~~~~~~~s~~~~ 227 (290)
T 2r6h_A 158 EMLYIGGGAGMAPLRAQILHLFRTLKT-------GRKVSYWYGARSKNEI-FYEEDFREIEREF--PNFKFHIALSDPQP 227 (290)
T ss_dssp EEEEEEEGGGHHHHHHHHHHHHHTSCC-------CSCEEEEEEESSGGGC-CSHHHHHHHHHHC--TTEEEEEEESSCCG
T ss_pred eEEEEECccCHHHHHHHHHHHHHhcCC-------CCcEEEEEEcCCHHHH-HHHHHHHHHHHhC--CCeEEEEEEccCCc
Confidence 999999999999999999998865322 2589999999999887 4788899887653 46888888887421
Q ss_pred CCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcC
Q psy5584 1921 KFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKG 2000 (2014)
Q Consensus 1921 ~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~ 2000 (2014)
. +.+.|. .||.+. .+++.+...........||+|||++|+++|++.+.+.
T Consensus 228 ~---------------------~~~~g~-----~g~v~~-~~~~~~l~~~~~~~~~~vyvCGp~~m~~~v~~~l~~~--- 277 (290)
T 2r6h_A 228 E---------------------DNWTGY-----VGFIHQ-VIYDNYLKDHDAPEDIEYYMCGPGPMANAVKGMLENL--- 277 (290)
T ss_dssp G---------------------GCCCSC-----BSCHHH-HHHHHTTTTCSCGGGEEEEEECCHHHHHHHHHHHHHH---
T ss_pred c---------------------cCCCCe-----eEecCH-HHHHhHHhhccCcCCcEEEEECCHHHHHHHHHHHHHc---
Confidence 1 011221 255431 2223222222222467899999999999999999987
Q ss_pred CCCCeEEEEEecCC
Q psy5584 2001 RKLPYFIHHFENFG 2014 (2014)
Q Consensus 2001 ~g~~~~~~h~E~Fg 2014 (2014)
|++.-.+|.|.||
T Consensus 278 -G~~~~~i~~e~F~ 290 (290)
T 2r6h_A 278 -GVPRNMLFFDDFG 290 (290)
T ss_dssp -TCCGGGEEEECCC
T ss_pred -CCCHHHEEecccC
Confidence 6777899999997
No 11
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.93 E-value=4.6e-25 Score=278.02 Aligned_cols=223 Identities=18% Similarity=0.265 Sum_probs=182.2
Q ss_pred eeeeeEeEEEEEEEcCCCEEEEEEecCC--CC-----cccCCCEEEEEecCC----CCCcccccccCCCCCCCeEEEEEE
Q psy5584 1728 RTKYMALDILETELLPSDVIKIRFYRPP--NF-----TYHSGQWVRLACTAF----KNAAYHSFTLTSAPHENFLSCHIK 1796 (2014)
Q Consensus 1728 ~r~~~~~~v~~v~~l~~~v~~l~~~~p~--~~-----~~~pGQyv~L~~p~~----~~~e~HPFTIaS~p~~~~l~l~Ir 1796 (2014)
++.+..++|++++.++++++.++++.|. .+ .|+|||||.|.++.. +..++|||||+|+|.++.++|+||
T Consensus 146 w~~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~l~~~~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~~~~~~i~Vk 225 (399)
T 4g1v_A 146 WPGWKPFEITAKEYVASDIVEFTVKPKFGSGIELESLPITPGQYITVNTHPIRQENQYDALRHYSLCSASTKNGLRFAVK 225 (399)
T ss_dssp SCSCEEEEEEEEEEEETTEEEEEEEECTTSCCCGGGCCCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCCTTCEEEEEE
T ss_pred CCcceEEEEEEEEEcCCCeEEEEEEcCCCCcCCcCCCCCCCCCEEEEEEeCCCCCCccceeeeecccCCCCCCeEEEEEE
Confidence 4556778999999999999999999874 33 799999999997533 346899999999998899999999
Q ss_pred e--------cCCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcC----CCceEEEEEeccchhhHHHHHHHHHhc
Q psy5584 1797 A--------QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWY----KFEVAVMVGGGIGVTPYASILNDLVFG 1864 (2014)
Q Consensus 1797 ~--------~G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~----~~~~vvlIaGGiGITP~lsiL~~l~~~ 1864 (2014)
. .|.+|+.|++.++.+. ++.|.||||.+..+.. .++++|||||||||||++|++++++..
T Consensus 226 ~~~~~~~~~~G~~S~~L~~~l~~Gd--------~v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~ 297 (399)
T 4g1v_A 226 MEAARENFPAGLVSEYLHKDAKVGD--------EIKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKC 297 (399)
T ss_dssp CCCCBTTBCCCHHHHHHHHTCCTTC--------EEEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHH
T ss_pred eccCCCCCCCCEehhHHHhCCCCCC--------EEEEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHc
Confidence 8 5778999987665543 8999999999876544 578999999999999999999999876
Q ss_pred cCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhccccccccccc
Q psy5584 1865 TSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSM 1944 (2014)
Q Consensus 1865 ~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~ 1944 (2014)
.. .++|+|+|++|+.+++ +|.++|.++.+.. +.+++++++++..
T Consensus 298 ~~--------~~~v~l~~~~r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~------------------------- 341 (399)
T 4g1v_A 298 NP--------NRPIYWIQSSYDEKTQ-AFKKHVDELLAEC--ANVDKIIVHTDTE------------------------- 341 (399)
T ss_dssp CT--------TSCEEEEEEESSSTTS-TTHHHHHHHHTTC--SSEEEEEEETTTS-------------------------
T ss_pred CC--------CCCEEEEEecCCHHHh-hhHHHHHHHHHhC--CCcEEEEEEeCCC-------------------------
Confidence 32 2589999999998887 4778898887653 4688888887631
Q ss_pred ccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1945 FTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1945 ~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
||++...+.+ ..+. ...||+|||++|++++++.+.+. |++.-++|+|.||
T Consensus 342 ----------g~~~~~~l~~----~~~~--~~~vyvCGp~~m~~~v~~~L~~~----Gv~~~~i~~E~Fg 391 (399)
T 4g1v_A 342 ----------PLINAAFLKE----KSPA--HADVYTCGSLAFMQAMIGHLKEL----EHRDDMIHYEPFG 391 (399)
T ss_dssp ----------CCCCHHHHHH----HSCS--SCEEEEEECHHHHHHHHHHHHHT----TCCGGGEEEEESS
T ss_pred ----------CcccHHHHHh----hCCC--CCEEEEECCHHHHHHHHHHHHHc----CCCHHHeeeeccC
Confidence 6777443332 2232 56799999999999999999887 7788899999997
No 12
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.93 E-value=1.1e-25 Score=268.87 Aligned_cols=235 Identities=14% Similarity=0.147 Sum_probs=172.7
Q ss_pred eeeeEeEEEEEEEcCCCEEEEEEecCCCCcccCCCEEEEEecCCCCCcccccccCCCCCCCeEEEEEEec--CCccHHHH
Q psy5584 1729 TKYMALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHENFLSCHIKAQ--GPWTWKLR 1806 (2014)
Q Consensus 1729 r~~~~~~v~~v~~l~~~v~~l~~~~p~~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~~~l~l~Ir~~--G~~T~~L~ 1806 (2014)
..+..++|++++.+++++++++++.|..+.|+||||++|.+|..+..++|||||+|+|.++.++|+|+.. |.+|+.|.
T Consensus 17 ~~~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~~~~~~~v~~~~~G~~s~~l~ 96 (271)
T 4fk8_A 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYEEHLEFFSIKVQNGPLTSRLQ 96 (271)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEECCCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSSEEEEEECCTTCTTHHHHT
T ss_pred ccceeEEEEEEEEcCCCEEEEEEEcCCCCCcCCCCEEEEEccCCCceeeeeEeccCCCCCCcEEEEEEEECCCchhhHHh
Confidence 4467789999999999999999998888999999999999997666789999999999888999999998 99999985
Q ss_pred hhhccCCCCCCCCCcEEEEE-CCCCCCCCCc-CCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEe
Q psy5584 1807 NYFDPCNFNASEDQPKIRLE-GPFGGGNQDW-YKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWIC 1884 (2014)
Q Consensus 1807 ~~~~~~~~~~~~~~~~v~Id-GPyG~~~~~~-~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~ 1884 (2014)
+ ++. +.++.|. ||||.+.... ..++++|||||||||||++|+++++..... .++|+|+|++
T Consensus 97 ~-l~~--------Gd~v~v~~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~--------~~~v~l~~~~ 159 (271)
T 4fk8_A 97 H-LKV--------GDPVLIGKKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYER--------FDKVVLTHTC 159 (271)
T ss_dssp T-CCT--------TCEEEEESCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHHH--------CSEEEEEECC
T ss_pred c-CCC--------CCEEEEecCCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcCC--------CCCEEEEEec
Confidence 3 333 3489999 9999987543 367899999999999999999999876532 2489999999
Q ss_pred CCcccHHHHHHHHHHHHhcCCC------CcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCC
Q psy5584 1885 PSHKHFEWFIDVLRDVEKKDVT------NVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPD 1958 (2014)
Q Consensus 1885 R~~~~l~w~~~~L~~l~~~~~~------~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd 1958 (2014)
|+.+++. +.++|.++.+.... ..+++++.+++... + +.||++
T Consensus 160 r~~~~~~-~~~el~~l~~~~~~~~~~~~~~~~~~~~~s~~~~--------------------------~-----~~G~v~ 207 (271)
T 4fk8_A 160 RLKGELA-YMDYIKHDLPGHEYLGDVIREKLVYYPTVTREEF--------------------------E-----NEGRIT 207 (271)
T ss_dssp CSHHHHH-HHHHHHTCCTTCTTHHHHHHHHEEEEECC--------------------------------------CCHHH
T ss_pred CCHHHHh-HHHHHHHHHHhCccccccccceEEEEEEecCCcc--------------------------c-----cccccC
Confidence 9999886 66777766443210 14666655554311 0 114433
Q ss_pred HHHHHH-HHHHhC----CCCCeEEEEEeCChhhHHHHHHHHHhhhcCCC-C-CeEEEEEecC
Q psy5584 1959 MSSFLK-FVQKKH----SYVSKIGVFSCGPRPLTKSIMSACEEVNKGRK-L-PYFIHHFENF 2013 (2014)
Q Consensus 1959 ~~~il~-~l~~~~----~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g-~-~~~~~h~E~F 2013 (2014)
-. +.+ .+.+.. .......||+|||++|++++++++++.+-... + ..-++|.|.|
T Consensus 208 ~~-~~~~~l~~~~~~~~~~~~~~~v~vCGp~~m~~~v~~~l~~~gv~~~~i~~~~~~~~E~y 268 (271)
T 4fk8_A 208 DL-IASGKLFTDLDMPPFSPEQDRVMLCGSTAMLKDTTELLKKAGLVEGKNSAPGHYVIERA 268 (271)
T ss_dssp HH-HHHSHHHHHTTCCCCCTTTEEEEEEECHHHHHHHHHHHHHTTCCBCBTTBCBSEEEEES
T ss_pred hH-HhcchhhhhcccccCCCCCCEEEEECCHHHHHHHHHHHHHcCCchhhcCCCCcEEEEEe
Confidence 11 111 122211 12246889999999999999999998863311 1 1347888876
No 13
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=99.93 E-value=2.1e-25 Score=271.42 Aligned_cols=240 Identities=16% Similarity=0.178 Sum_probs=175.1
Q ss_pred eeEeEEEEEEEcC-----CCEEEEEEecCCCCcccCCCEEEEEecCCC--------------------------------
Q psy5584 1731 YMALDILETELLP-----SDVIKIRFYRPPNFTYHSGQWVRLACTAFK-------------------------------- 1773 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~-----~~v~~l~~~~p~~~~~~pGQyv~L~~p~~~-------------------------------- 1773 (2014)
.+.++|++++.+. ++|.+|+|..+..++|+||||+.|.+|...
T Consensus 15 p~~~~v~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~GQ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 94 (316)
T 3jqq_A 15 PLKCKIVDKINLVRPNSPNEVYHLEINHNGLFKYLEGHTCGIIPYYNELDNNPNNQINKDHNIINTTNHTNHNNIALSHI 94 (316)
T ss_dssp CEEEEEEEEEECSCTTCSCCEEEEEEECTTCCCCCTTCEEEECTTCC---------------------------------
T ss_pred CEEEEEEeeEEccCCCCCCceEEEEEeCCCCcceecCcEeEEECCCcccccccccccccccccccccccccccccccccC
Confidence 3578899999886 899999999988999999999999998763
Q ss_pred --CCcccccccCCCCCCCeEEEEEEec--------------CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcC
Q psy5584 1774 --NAAYHSFTLTSAPHENFLSCHIKAQ--------------GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWY 1837 (2014)
Q Consensus 1774 --~~e~HPFTIaS~p~~~~l~l~Ir~~--------------G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~ 1837 (2014)
...+|||||+|+|.++.++|+||.. |.+|..|.+ +.. +.+|.|+||||.+..+..
T Consensus 95 ~g~~~~R~ySIaS~p~~~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~-l~~--------Gd~v~v~gP~G~f~l~~~ 165 (316)
T 3jqq_A 95 KKQRCARLYSISSSNNMENLSVAIKIHKYEQTENAPNITNYGYCSGFIKN-LKI--------NDDIYLTGAHGYFNLPND 165 (316)
T ss_dssp --CCCCEEEEBCSCTTSSSEEEEEECCBC---------CCBCHHHHHHHT-CCT--------TCEEEEEEEECCCCCCTT
T ss_pred CCcccceeeecccCCCCCeEEEEEEEEEecccccccCcCCCCchhHHHhh-CCC--------CCEEEEEecCCceEcCCc
Confidence 3689999999999888999999975 889999853 333 338999999999875443
Q ss_pred ---CCceEEEEEeccchhhHHHHHHHHHhccCCC--CCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEE
Q psy5584 1838 ---KFEVAVMVGGGIGVTPYASILNDLVFGTSTN--RYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIH 1912 (2014)
Q Consensus 1838 ---~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~--~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~ 1912 (2014)
..+++|||||||||||++|+|+++......+ .......++|+|+|++|+.+++ ||.++|+++++.. ...++++
T Consensus 166 ~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~d~-~~~~eL~~l~~~~-~~~~~~~ 243 (316)
T 3jqq_A 166 AIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNEDSI-LYLNELEYFQKMY-PNNINIH 243 (316)
T ss_dssp HHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGGGC-TTHHHHHHHHHHC-TTTEEEE
T ss_pred ccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHHHh-hcHHHHHHHHHhC-CCcEEEE
Confidence 2789999999999999999999998653210 0011234689999999999987 6889999987653 3378999
Q ss_pred EEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHH----HHHhCCCCCeEEEEEeCChhhHH
Q psy5584 1913 IFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKF----VQKKHSYVSKIGVFSCGPRPLTK 1988 (2014)
Q Consensus 1913 iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~----l~~~~~~~~~v~V~vCGP~~m~~ 1988 (2014)
+++|+... ++... |+ +.+.+.. +.+.... ....||+|||++|++
T Consensus 244 ~~~s~~~~-~~g~~----------------------------g~--V~~~l~~~~~~~~~~l~~-~~~~vyvCGP~~m~~ 291 (316)
T 3jqq_A 244 YVFSYKQN-SDATS----------------------------FY--VQDEIYKRKTEFLNLFNN-YKCELYICGKKSIRY 291 (316)
T ss_dssp EEEGGGCC----CB----------------------------CC--HHHHHHHTHHHHHHHHHH-TCCEEEEEECSTHHH
T ss_pred EEECCCcc-cCCCc----------------------------cc--hhHHHHHhHHHHHHhhcc-CCeEEEEeCCHHHHH
Confidence 99998521 11110 11 1111111 1110000 245799999999999
Q ss_pred HHHHHHHhhhcCCCCCeEEEEEecC
Q psy5584 1989 SIMSACEEVNKGRKLPYFIHHFENF 2013 (2014)
Q Consensus 1989 ~vr~a~~~~~~~~g~~~~~~h~E~F 2013 (2014)
++++++.+.+.-..++.-++|+|.|
T Consensus 292 ~v~~~l~~~G~~~~v~~~rih~E~f 316 (316)
T 3jqq_A 292 KVMDILKSHDQFDEKKKKRVHVEVY 316 (316)
T ss_dssp HHHHHHHC----CHHHHTTEEEEEC
T ss_pred HHHHHHHHcCCCcccccccEEEEeC
Confidence 9999999885211124557999987
No 14
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.92 E-value=5.3e-25 Score=271.42 Aligned_cols=225 Identities=17% Similarity=0.252 Sum_probs=177.5
Q ss_pred eeeEeEEEEEEEcCCCEEEEEEecCC---CCcccCCCEEEEEecCCCCCcccccccCCCCCCCeEEEEEEec--CCccHH
Q psy5584 1730 KYMALDILETELLPSDVIKIRFYRPP---NFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHENFLSCHIKAQ--GPWTWK 1804 (2014)
Q Consensus 1730 ~~~~~~v~~v~~l~~~v~~l~~~~p~---~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~~~l~l~Ir~~--G~~T~~ 1804 (2014)
..+.++|++++.+++++++++|+.|. .+.|+||||+.|.+|.. .++|||||+|.|.++.++|+||.. |.+|+.
T Consensus 107 ~~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~--~~~R~ySi~s~~~~~~l~~~vk~~~~G~~S~~ 184 (338)
T 1krh_A 107 HHFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPGT--TETRSYSFSSQPGNRLTGFVVRNVPQGKMSEY 184 (338)
T ss_dssp EEEEEEEEEEEESSSSEEEEEEEECTTCCCCCCCTTCEEEEECTTS--SCEEEEECCSCTTCSEEEEEEECCTTCHHHHH
T ss_pred eEEEEEEEEEEEcCCCEEEEEEEeCCCCCCCCcCCCCeEEEEcCCC--CccccccccCCCCCCeEEEEEEEcCCCCchhh
Confidence 35678999999999999999999876 57899999999999853 579999999999888999999998 889999
Q ss_pred HHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEe
Q psy5584 1805 LRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWIC 1884 (2014)
Q Consensus 1805 L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~ 1884 (2014)
|++.++.+ ..+.|.||||.+..... .+++|||||||||||++++++++..... .++|+|+|++
T Consensus 185 L~~~l~~G--------d~v~v~gP~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~~~--------~~~v~l~~~~ 247 (338)
T 1krh_A 185 LSVQAKAG--------DKMSFTGPFGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQKGS--------EHPVRLVFGV 247 (338)
T ss_dssp HHTTCCTT--------CEEEEEEEECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHHCC--------SSCEEEEEEE
T ss_pred HhhccCCC--------CEEEEECCccceEeCCC-CceEEEEEccccHhHHHHHHHHHHHcCC--------CCeEEEEEEe
Confidence 97665544 38999999999875433 4899999999999999999999987632 2589999999
Q ss_pred CCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHH
Q psy5584 1885 PSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLK 1964 (2014)
Q Consensus 1885 R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~ 1964 (2014)
|+.+++ ++.++|.++.+.. +.++++.++++....+. +.||.+ +.+..
T Consensus 248 r~~~d~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~~-----------------------------~~g~v~-~~l~~ 294 (338)
T 1krh_A 248 TQDCDL-VALEQLDALQQKL--PWFEYRTVVAHAESQHE-----------------------------RKGYVT-GHIEY 294 (338)
T ss_dssp SSGGGC-CCHHHHHHHHHHC--TTEEEEEEETTCCSSSS-----------------------------EESCSG-GGCCG
T ss_pred CCHHHh-hhHHHHHHHHHhC--CCeEEEEEEecCCCCCC-----------------------------ccCccC-HHHHH
Confidence 999988 5788898887653 46889988887532211 012222 00000
Q ss_pred HHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1965 FVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1965 ~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
..... .+..||+|||++|++++++.+.+. |++.-++|.|.|+
T Consensus 295 ~~~~~----~~~~vy~CGp~~m~~~v~~~l~~~----G~~~~~i~~e~F~ 336 (338)
T 1krh_A 295 DWLNG----GEVDVYLCGPVPMVEAVRSWLDTQ----GIQPANFLFEKFS 336 (338)
T ss_dssp GGGGG----GCSEEEEEEEHHHHHHHHHHHHHH----TCCCSEEEEEEEC
T ss_pred hhccc----CCcEEEEECCHHHHHHHHHHHHHc----CCCHHHEEEEeec
Confidence 00011 234699999999999999999987 7777899999996
No 15
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.92 E-value=5.9e-24 Score=250.50 Aligned_cols=232 Identities=13% Similarity=0.166 Sum_probs=171.9
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCCCCcccCCCEEEEEecCCCCCcccccccCCCCCCCeEEEEEEec--CCccHHHHhh
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHENFLSCHIKAQ--GPWTWKLRNY 1808 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~~~l~l~Ir~~--G~~T~~L~~~ 1808 (2014)
+..++|++++.+++++++++++ |..+.|+|||||.|.+|..+...+|||||+|+|.++.++|+||.. |.+|+.|.+
T Consensus 4 ~~~~~V~~~~~~~~~~~~l~l~-~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~~~l~~~v~~~~~G~~s~~l~~- 81 (248)
T 1fdr_A 4 WVTGKVTKVQNWTDALFSLTVH-APVLPFTAGQFTKLGLEIDGERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAA- 81 (248)
T ss_dssp EEEEEEEEEEECSSSEEEEEEE-CCCCCCCTTCEEEEEECC---CEEEEEECCSCTTCSSEEEEEECCTTCSSHHHHHT-
T ss_pred eEEEEEEEEEEcCCCEEEEEEe-CCCCCcCCCCcEEEEccCCCCeeeeeecccCCCCCCcEEEEEEEeCCCchhhHHHh-
Confidence 4568899999999999999997 567889999999999997666789999999999888999999988 999999974
Q ss_pred hccCCCCCCCCCcEEEEE-CCCCCCCCCcC-CCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCC
Q psy5584 1809 FDPCNFNASEDQPKIRLE-GPFGGGNQDWY-KFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPS 1886 (2014)
Q Consensus 1809 ~~~~~~~~~~~~~~v~Id-GPyG~~~~~~~-~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~ 1886 (2014)
++.+ ..+.|. ||||.+..+.. +++++|||||||||||++++++++.... ..++|+|+|++|+
T Consensus 82 l~~G--------d~v~v~~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~~~--------~~~~v~l~~~~r~ 145 (248)
T 1fdr_A 82 LKPG--------DEVQVVSEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKDLD--------RFKNLVLVHAARY 145 (248)
T ss_dssp CCTT--------CEEEEESSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCSCT--------TCSEEEEEEEESS
T ss_pred CCCc--------CEEEEecCCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHhhC--------CCCcEEEEEEcCC
Confidence 3333 389999 99999764332 3789999999999999999999875431 2358999999999
Q ss_pred cccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHH--
Q psy5584 1887 HKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLK-- 1964 (2014)
Q Consensus 1887 ~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~-- 1964 (2014)
.+++ ++.++|+++.+.. .+.++++..+|+..... + +.||.+ +.+.
T Consensus 146 ~~~~-~~~~el~~l~~~~-~~~~~~~~~~s~~~~~~------------------------~-----~~g~v~--~~l~~~ 192 (248)
T 1fdr_A 146 AADL-SYLPLMQELEKRY-EGKLRIQTVVSRETAAG------------------------S-----LTGRIP--ALIESG 192 (248)
T ss_dssp GGGC-TTHHHHHHHHHHT-TTSEEEEEEESSSCCTT------------------------E-----EESCHH--HHHHTS
T ss_pred HHHh-hHHHHHHHHHHhC-cCcEEEEEEEecCCCCC------------------------C-----cceeeC--hHHHhh
Confidence 9887 5788888886542 34788888888753210 0 114422 2221
Q ss_pred ---HHHHhCCCCCeEEEEEeCChhhHHHHHHHH-HhhhcCCC--CCeEEEEEecC
Q psy5584 1965 ---FVQKKHSYVSKIGVFSCGPRPLTKSIMSAC-EEVNKGRK--LPYFIHHFENF 2013 (2014)
Q Consensus 1965 ---~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~-~~~~~~~g--~~~~~~h~E~F 2013 (2014)
.............||+|||++|++++++.+ .+.+.... ...-+++.|.|
T Consensus 193 ~l~~~~~~~~~~~~~~vy~CGp~~m~~~v~~~l~~~~G~~~~~i~~~~~~~~E~~ 247 (248)
T 1fdr_A 193 ELESTIGLPMNKETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRRRPGHMTAEHY 247 (248)
T ss_dssp HHHHHHTSCCCTTTEEEEEEECHHHHHHHHHHHHHHHCCCBCBTTBCCSEEEEEC
T ss_pred hHHHhhccCCCccCCEEEEeCCHHHHHHHHHHHHHHcCCChHHcCCCccEEEEec
Confidence 111111222467899999999999999999 87742211 12336777776
No 16
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.92 E-value=3.5e-24 Score=251.58 Aligned_cols=225 Identities=17% Similarity=0.254 Sum_probs=172.9
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCC---CCcccCCCEEEEEecCCCCCcccccccCCCCC-CCeEEEEEEec--CCccHH
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPP---NFTYHSGQWVRLACTAFKNAAYHSFTLTSAPH-ENFLSCHIKAQ--GPWTWK 1804 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~---~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~-~~~l~l~Ir~~--G~~T~~ 1804 (2014)
+..++|++++.+++++..++|..|. .+.|+|||||.|.+|..+...+|||||+|.|. ++.++|+||.. |.+|+.
T Consensus 11 ~~~~~v~~~~~~t~~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~~~~~~l~vk~~~~G~~S~~ 90 (243)
T 2eix_A 11 YKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSSDDEKGYFDLIIKVYEKGQMSQY 90 (243)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCTTCHHHHH
T ss_pred eEEEEEEEEEEeCCCeEEEEEEcCCCCcccCcCCceEEEEEEeeCCCEEEeeeeecCCCCCCCEEEEEEEEcCCCCcchH
Confidence 4578899999999999999998774 46799999999999865556889999999985 57899999997 889998
Q ss_pred HHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEe
Q psy5584 1805 LRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWIC 1884 (2014)
Q Consensus 1805 L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~ 1884 (2014)
|.+ ++. +..+.|.||||.+......++++|||||||||||++++++++..... ..++|+|+|++
T Consensus 91 l~~-l~~--------Gd~v~v~gP~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~-------~~~~v~l~~~~ 154 (243)
T 2eix_A 91 IDH-LNP--------GDFLQVRGPKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKNPK-------EKTIINLIFAN 154 (243)
T ss_dssp HHT-CCT--------TCEEEEEEEECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTCTT-------CCCEEEEEEEE
T ss_pred hhc-CCC--------CCEEEEECCeEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhCCC-------CCcEEEEEEEc
Confidence 864 333 33899999999976544457899999999999999999999986421 23689999999
Q ss_pred CCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHH
Q psy5584 1885 PSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLK 1964 (2014)
Q Consensus 1885 R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~ 1964 (2014)
|+.+++ ++.++|+++.+.. +.+++++.+++..+. +.| +.||.+.. +++
T Consensus 155 r~~~~~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~-----------------------~~g-----~~g~v~~~-~l~ 202 (243)
T 2eix_A 155 VNEDDI-LLRTELDDMAKKY--SNFKVYYVLNNPPAG-----------------------WTG-----GVGFVSAD-MIK 202 (243)
T ss_dssp EEGGGC-TTHHHHHHHHHHC--TTEEEEEEEEECCTT-----------------------CCS-----EESSCCHH-HHH
T ss_pred CCHHHh-hHHHHHHHHHHHC--CCeEEEEEeCCCCcc-----------------------ccC-----cCCccCHH-HHH
Confidence 999887 5788899887653 368888888764211 112 12777632 233
Q ss_pred HHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEE
Q psy5584 1965 FVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHH 2009 (2014)
Q Consensus 1965 ~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h 2009 (2014)
...... .....||+|||++|++++++.+.+. |++.-++|
T Consensus 203 ~~~~~~--~~~~~vy~CGp~~m~~~v~~~l~~~----G~~~~~i~ 241 (243)
T 2eix_A 203 QHFSPP--SSDIKVMMCGPPMMNKAMQGHLETL----GYTPEQWF 241 (243)
T ss_dssp HHSCCT--TSSEEEEEESSHHHHHHHHHHHHHH----TCCGGGEE
T ss_pred HhcCCC--CCCeEEEEECCHHHHHHHHHHHHHc----CCCHHHEE
Confidence 322111 1357899999999999999999987 55554555
No 17
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=99.92 E-value=3.5e-24 Score=261.01 Aligned_cols=224 Identities=16% Similarity=0.160 Sum_probs=169.8
Q ss_pred eeEeEEEEEEEcC-----CCEEEEEEecCCCCcccCCCEEEEEecCCC------CCcccccccCCCCCC-----CeEEEE
Q psy5584 1731 YMALDILETELLP-----SDVIKIRFYRPPNFTYHSGQWVRLACTAFK------NAAYHSFTLTSAPHE-----NFLSCH 1794 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~-----~~v~~l~~~~p~~~~~~pGQyv~L~~p~~~------~~e~HPFTIaS~p~~-----~~l~l~ 1794 (2014)
...++|++++.++ +++++++|+.|..+.|+|||||+|.+|..+ ..++|||||+|+|.+ +.++|+
T Consensus 28 ~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~~~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~ 107 (311)
T 3lo8_A 28 PFTATIVSVESLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLC 107 (311)
T ss_dssp CEEEEEEEEEECSCTTSSSCEEEEEEECTTSSCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEE
T ss_pred CeEEEEEeeEeccCCCCCCccEEEEEeCCCCCcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEE
Confidence 4678899999999 899999999988899999999999999753 248999999999953 689999
Q ss_pred EEec---------------CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCc--CCCceEEEEEeccchhhHHHH
Q psy5584 1795 IKAQ---------------GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDW--YKFEVAVMVGGGIGVTPYASI 1857 (2014)
Q Consensus 1795 Ir~~---------------G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~--~~~~~vvlIaGGiGITP~lsi 1857 (2014)
||.. |.+|+.|.+ +..+ .++.|.||||.+.... ..++++|||||||||||++|+
T Consensus 108 Vk~~~~~~~~~~~~~~~~~G~~S~~L~~-l~~G--------d~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~ 178 (311)
T 3lo8_A 108 VRRAVYYDPETGKEDPSKNGVCSNFLCN-SKPG--------DKIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGY 178 (311)
T ss_dssp EECCCCCCTTTCCCCGGGSCHHHHHHHT-CCTT--------CEEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHH
T ss_pred EEEEEecccccCcCCcCCCCchhhHHhc-CCCc--------CEEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHH
Confidence 9975 889999987 4433 3899999999987433 367899999999999999999
Q ss_pred HHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccc
Q psy5584 1858 LNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQ 1937 (2014)
Q Consensus 1858 L~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~ 1937 (2014)
|++++...... ....++++|+|++|+.+++. |.++|.++++.. ...+++++++|+....+
T Consensus 179 l~~~~~~~~~~---~~~~~~v~l~~g~r~~~d~~-~~~el~~l~~~~-~~~~~~~~~~s~~~~~~--------------- 238 (311)
T 3lo8_A 179 LRRMFMEDVPN---YRFGGLAWLFLGVANSDSLL-YDEEFTSYLKQY-PDNFRYDKALSREQKNR--------------- 238 (311)
T ss_dssp HHHHHTEECTT---CCCCSEEEEEEEESSGGGCS-SHHHHHHHHHHC-TTTEEEEEEETTTC------------------
T ss_pred HHHHHHhcccc---ccCCCCEEEEEecCChHHhh-HHHHHHHHHHhC-CCcEEEEEEECCCCccc---------------
Confidence 99998764221 11236899999999998875 788899887653 23789999998853211
Q ss_pred cccccccccCcccccccCCCCHHHHHHHH----HHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcC
Q psy5584 1938 RLSKSSMFTGLKAVNHFGRPDMSSFLKFV----QKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKG 2000 (2014)
Q Consensus 1938 ~~~~~~~~tgl~~~~~~GRPd~~~il~~l----~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~ 2000 (2014)
.| ++..+.+.+... ..... ....||+|||++|+++|++++.+....
T Consensus 239 --------~g-------~~~~v~~~l~~~~~~~~~~~~--~~~~vyvCGp~~m~~~v~~~L~~~~~~ 288 (311)
T 3lo8_A 239 --------SG-------GKMYVQDKIEEYSDEIFKLLD--GGAHIYFCGLKGMMPGIQDTLKKVAER 288 (311)
T ss_dssp -------------------CCHHHHHHHTHHHHHHHHH--TTCEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred --------CC-------CcceehHHHHHHHHHHHHhhc--CCcEEEEECCHHHHHHHHHHHHHHHHh
Confidence 01 223333333321 11111 245799999999999999999987643
No 18
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.92 E-value=3.4e-24 Score=270.05 Aligned_cols=235 Identities=15% Similarity=0.187 Sum_probs=182.6
Q ss_pred eeeeEeEEEEEEEcCCCEEEEEEecCCC---CcccCCCEEEEEecCCC--CCcccccccCCCCCCCeEEEEEEec--CCc
Q psy5584 1729 TKYMALDILETELLPSDVIKIRFYRPPN---FTYHSGQWVRLACTAFK--NAAYHSFTLTSAPHENFLSCHIKAQ--GPW 1801 (2014)
Q Consensus 1729 r~~~~~~v~~v~~l~~~v~~l~~~~p~~---~~~~pGQyv~L~~p~~~--~~e~HPFTIaS~p~~~~l~l~Ir~~--G~~ 1801 (2014)
+.+..++|++++.+++++++++|+.|.. ..|+|||||.|.+|..+ ..++|||||+|+|.++.++|+||.. |.+
T Consensus 150 ~~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~~~~~~i~Vk~~~~G~~ 229 (396)
T 1gvh_A 150 EGTRDFRIVAKTPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKREEGGQV 229 (396)
T ss_dssp SSEEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEECCTTCSSCEEEEEECCSCCCSSCEEEEEECCTTCHH
T ss_pred CCcEEEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCeEEEEecCCCCccceeecceeccCCCCCeEEEEEEEcCCCcc
Confidence 4456789999999999999999998742 57999999999998433 2679999999999888999999998 899
Q ss_pred cHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEE
Q psy5584 1802 TWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFL 1881 (2014)
Q Consensus 1802 T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~li 1881 (2014)
|+.|++.+..+ .++.|.||||.+..+....+++|||||||||||++|+++++..... .++|+|+
T Consensus 230 S~~L~~~l~~G--------d~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~~~--------~~~v~l~ 293 (396)
T 1gvh_A 230 SNWLHNHANVG--------DVVKLVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKAGH--------TAQVNWF 293 (396)
T ss_dssp HHHHHHTCCTT--------CEEEEEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHHTC--------CSCEEEE
T ss_pred hHHHHhcCCCC--------CEEEEEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhcCC--------CCcEEEE
Confidence 99998865554 3899999999886543467899999999999999999999987632 2589999
Q ss_pred EEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHH
Q psy5584 1882 WICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSS 1961 (2014)
Q Consensus 1882 W~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~ 1961 (2014)
|++|+.+++. |.++|+++++.. +++++++++++...... . | ....+.||++...
T Consensus 294 ~~~r~~~~~~-~~~el~~l~~~~--~~~~~~~~~s~~~~~~~----------------~------~-~~~~~~G~~~~~~ 347 (396)
T 1gvh_A 294 HAAENGDVHA-FADEVKELGQSL--PRFTAHTWYRQPSEADR----------------A------K-GQFDSEGLMDLSK 347 (396)
T ss_dssp EEESCTTTCC-SHHHHHHHHHTS--SSEEEEEEESSCCHHHH----------------H------H-TCCSEESSCCGGG
T ss_pred EEeCCHHHhh-hHHHHHHHHHHC--CCeEEEEEECCCCcccc----------------c------c-CccCccCcCCHHH
Confidence 9999999875 788899887653 46888888887421100 0 0 0011236776432
Q ss_pred HHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1962 FLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1962 il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
+ . .........||+|||++|++++++.+.+. |++.-++|+|.||
T Consensus 348 l-~----~~~~~~~~~vyvCGp~~m~~~v~~~L~~~----Gv~~~~i~~E~F~ 391 (396)
T 1gvh_A 348 L-E----GAFSDPTMQFYLCGPVGFMQFTAKQLVDL----GVKQENIHYECFG 391 (396)
T ss_dssp S-S----SCCCCTTCEEEEESCHHHHHHHHHHHHHT----TCCGGGEEEECSS
T ss_pred H-h----hccCCCCCEEEEeCCHHHHHHHHHHHHHc----CCCHHHEEEeccC
Confidence 2 1 10001145699999999999999999887 7788889999997
No 19
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.91 E-value=8.1e-24 Score=267.28 Aligned_cols=234 Identities=18% Similarity=0.276 Sum_probs=182.1
Q ss_pred eeeeEeEEEEEEEcCCCEEEEEEecCCC---CcccCCCEEEEEecCCC--CCcccccccCCCCCCCeEEEEEEec-----
Q psy5584 1729 TKYMALDILETELLPSDVIKIRFYRPPN---FTYHSGQWVRLACTAFK--NAAYHSFTLTSAPHENFLSCHIKAQ----- 1798 (2014)
Q Consensus 1729 r~~~~~~v~~v~~l~~~v~~l~~~~p~~---~~~~pGQyv~L~~p~~~--~~e~HPFTIaS~p~~~~l~l~Ir~~----- 1798 (2014)
+.+..++|++++.++++++.++|+.|.. ..|+|||||.|.+|..+ ..++|||||+|+|.++.++|+||..
T Consensus 152 ~~~~~~~V~~~~~~s~~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~~~~~~i~Vk~~~~~~~ 231 (403)
T 1cqx_A 152 KGWRTFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNGRTYRISVKREGGGPQ 231 (403)
T ss_dssp SSCEEEEEEEEEECSSSEEEEEEEETTCCCCCCCCTTCEEEEEEEETTTTEEEEEEEECCSCCCSSCEEEEEECCCBTTB
T ss_pred CcceeEEEEEEEEcCCCeEEEEEEeCCCCcCCCCCCCCEEEEEEecCCCCcceeecceecCCCCCCeEEEEEEECCCCCC
Confidence 4456789999999999999999997642 47999999999998433 2578999999999888999999997
Q ss_pred --CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCcc
Q psy5584 1799 --GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCK 1876 (2014)
Q Consensus 1799 --G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~ 1876 (2014)
|.+|+.|++.++.+. .+.|.||+|.+..+....+++|||||||||||++|+|+++.. . . .+
T Consensus 232 ~~G~~S~~L~~~l~~Gd--------~v~v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-~-~-------~~ 294 (403)
T 1cqx_A 232 PPGYVSNLLHDHVNVGD--------QVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-A-P-------PR 294 (403)
T ss_dssp CCCHHHHHHHHHCCTTC--------EEEECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-S-S-------CC
T ss_pred CCCeehHHHhhCCCCCC--------EEEEecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-C-C-------CC
Confidence 678999987655543 899999999886543467899999999999999999999975 1 1 25
Q ss_pred EEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCC
Q psy5584 1877 KVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGR 1956 (2014)
Q Consensus 1877 kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GR 1956 (2014)
+|+|+|++|+.+++. |.++|+++++.. +.+++++++++....... |. ...+.||
T Consensus 295 ~v~l~~~~r~~~~~~-~~~el~~l~~~~--~~~~~~~~~s~~~~~~~~----------------------~~-~~~~~G~ 348 (403)
T 1cqx_A 295 QVVFVHGARNSAVHA-MRDRLREAAKTY--ENLDLFVFYDQPLPEDVQ----------------------GR-DYDYPGL 348 (403)
T ss_dssp CEEEEEEESCSSSCH-HHHHHHHHHHHC--TTEEEEEEESSCCTTCCB----------------------TT-TBSEESS
T ss_pred cEEEEEEeCChhhCc-HHHHHHHHHHhC--CCcEEEEEECCCCccccc----------------------cc-ccCcCCC
Confidence 899999999999875 789999987653 458888888875321100 00 1123378
Q ss_pred CCHHHHHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1957 PDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1957 Pd~~~il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
++...+ ..+. ..+ ...||+|||++|+++|++.+.+. |++.-++|+|.||
T Consensus 349 i~~~~l-~~~~-~~~---~~~vyvCGp~~m~~~v~~~L~~~----Gv~~~~i~~E~F~ 397 (403)
T 1cqx_A 349 VDVKQI-EKSI-LLP---DADYYICGPIPFMRMQHDALKNL----GIHEARIHYEVFG 397 (403)
T ss_dssp CCGGGS-HHHH-CCT---TCEEEEESSHHHHHHHHHHHHHT----TCCGGGEEECCCS
T ss_pred cCHHHH-hhcc-CCC---CCEEEEeCCHHHHHHHHHHHHHc----CCCHHHeEEeeec
Confidence 875433 2221 112 45699999999999999999887 7788889999997
No 20
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=99.91 E-value=1.5e-23 Score=255.13 Aligned_cols=227 Identities=13% Similarity=0.205 Sum_probs=170.7
Q ss_pred eeEeEEEEEEEcCCC-----EEEEEEecCCCCcccCCCEEEEEecCCC----CCcccccccCCCCC-----CCeEEEEEE
Q psy5584 1731 YMALDILETELLPSD-----VIKIRFYRPPNFTYHSGQWVRLACTAFK----NAAYHSFTLTSAPH-----ENFLSCHIK 1796 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~-----v~~l~~~~p~~~~~~pGQyv~L~~p~~~----~~e~HPFTIaS~p~-----~~~l~l~Ir 1796 (2014)
.+.++|++++.++++ +++|+|..|..+.|+|||||+|.+|... ..++|||||+|+|. ++.++|+||
T Consensus 33 ~~~~~V~~~~~l~~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk 112 (310)
T 3vo2_A 33 PYVGRCLSNTRITGDDAPGETWHMVFSTEGEIPYREGQSIGIIADGEDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVK 112 (310)
T ss_dssp CEEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSCBCCCEEEECCSCTTTTTTSSSEEEEEEE
T ss_pred CEEEEEEEEEEccCCCCCccEEEEEEeCCCCCcccCCCEEEEECCCcCCCCCcCcceeeecCCCCcccCCCCCEEEEEEE
Confidence 367889999999887 9999999888889999999999998753 24689999999984 578999999
Q ss_pred ec-----------CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCC-cCCCceEEEEEeccchhhHHHHHHHHHhc
Q psy5584 1797 AQ-----------GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQD-WYKFEVAVMVGGGIGVTPYASILNDLVFG 1864 (2014)
Q Consensus 1797 ~~-----------G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~-~~~~~~vvlIaGGiGITP~lsiL~~l~~~ 1864 (2014)
.. |.+|+.|.+ +..+ .+|.|.||||.+... ...++++|||||||||||++|+|++++..
T Consensus 113 ~~~~~~~~~~~~~G~~S~~L~~-l~~G--------d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~ 183 (310)
T 3vo2_A 113 RLVYTNDQGEIVKGVCSNFLCD-LKPG--------ADVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLE 183 (310)
T ss_dssp CCEEECTTSCEEECHHHHHHHT-CCTT--------CEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSS
T ss_pred EEEeccCCCCcCCcchhhHHhc-CCCC--------CEEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHh
Confidence 85 889999987 4443 389999999987642 23578999999999999999999999865
Q ss_pred cCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhccccccccccc
Q psy5584 1865 TSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSM 1944 (2014)
Q Consensus 1865 ~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~ 1944 (2014)
.... ....++++|+|++|+.+++ +|.++|+++.+.. ...+++++++|+......
T Consensus 184 ~~~~---~~~~~~v~L~~g~r~~~d~-~~~~el~~l~~~~-~~~~~v~~~~sr~~~~~~--------------------- 237 (310)
T 3vo2_A 184 EHED---YKFSGLAWLFLGVPTSDSL-LYKEELEKMKEMA-PDNFRLDFAVSREQTNAA--------------------- 237 (310)
T ss_dssp CCTT---CCCCSEEEEEEEESSGGGC-CSHHHHHHHHHHC-TTTEEEEEEETTTCBCTT---------------------
T ss_pred hccc---ccCCCcEEEEEEecChhhc-ccHHHHHHHHHhC-CCCEEEEEEECCCCCCCC---------------------
Confidence 3221 1123689999999998876 4778899887653 237899999998632211
Q ss_pred ccCcccccccCCCCHHHHHH----HHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCC
Q psy5584 1945 FTGLKAVNHFGRPDMSSFLK----FVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRK 2002 (2014)
Q Consensus 1945 ~tgl~~~~~~GRPd~~~il~----~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g 2002 (2014)
| ++..+...+. .+.+.... ....||+|||++|+++|++++.++....|
T Consensus 238 --g-------~~~~v~~~l~~~~~~l~~~l~~-~~~~vyvCGp~~M~~~v~~~L~~~~~~~g 289 (310)
T 3vo2_A 238 --G-------EKMYIQTRMAEYREELWELLKK-DNTYVYMCGLKGMEKGIDDIMLNLAAKDG 289 (310)
T ss_dssp --C-------CBCCHHHHHHTTHHHHHHHHTS-TTEEEEEEESTTHHHHHHHHHHHHHHHTT
T ss_pred --C-------cceehHHHHHHHHHHHHHhccc-CCcEEEEeCCHHHHHHHHHHHHHHHHHcC
Confidence 1 1112222222 12211111 36789999999999999999998765433
No 21
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.91 E-value=4.5e-24 Score=252.83 Aligned_cols=228 Identities=14% Similarity=0.197 Sum_probs=173.2
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCCCCcccCCCEEEEEecCCCCCcccccccCCCCCCCeEEEEEEec--CCccHHHHhh
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHENFLSCHIKAQ--GPWTWKLRNY 1808 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~~~l~l~Ir~~--G~~T~~L~~~ 1808 (2014)
+..++|++++.+++++++++++.|..+.|+|||||.|.+|..+...+|||||+|+|.++.++|+|+.. |.+|+.|.+
T Consensus 3 ~~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~~i~~~~~G~~s~~l~~- 81 (257)
T 2qdx_A 3 LYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNYEEHLEFFSIKVPDGPLTSRLQH- 81 (257)
T ss_dssp SEEEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEEETTEEEEEEEECCSCTTSSEEEEEEECCTTCTTHHHHTT-
T ss_pred eEEEEEEEEEEcCCCeEEEEEeCCCCCccCCCCEEEEEecCCCCceeeeeEeecCCCCCeEEEEEEEeCCCcchhHHHh-
Confidence 45688999999999999999998888899999999999987666789999999999888999999988 999999863
Q ss_pred hccCCCCCCCCCcEEEEE-CCCCCCCCCcC-CCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCC
Q psy5584 1809 FDPCNFNASEDQPKIRLE-GPFGGGNQDWY-KFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPS 1886 (2014)
Q Consensus 1809 ~~~~~~~~~~~~~~v~Id-GPyG~~~~~~~-~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~ 1886 (2014)
++. +..+.|. ||||.+..+.. .++++|||||||||||++++++++..... .++|+|+|++|+
T Consensus 82 l~~--------Gd~v~v~~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~~--------~~~v~l~~~~r~ 145 (257)
T 2qdx_A 82 LKE--------GDELMVSRKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYER--------YEKVILVHGVRW 145 (257)
T ss_dssp CCT--------TCEEEECSCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHHH--------CSEEEEEEEESS
T ss_pred CCC--------CCEEEEecCCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcCC--------CCeEEEEEEcCC
Confidence 333 3389999 99999865432 36899999999999999999999875421 258999999999
Q ss_pred cccHHHHHHHHH-HHHhcC----C-CCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHH
Q psy5584 1887 HKHFEWFIDVLR-DVEKKD----V-TNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMS 1960 (2014)
Q Consensus 1887 ~~~l~w~~~~L~-~l~~~~----~-~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~ 1960 (2014)
.+++. |.++|. ++++.. . .+.++++..+|+.... +.||.+
T Consensus 146 ~~~~~-~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~~-------------------------------~~g~v~-- 191 (257)
T 2qdx_A 146 VSELA-YADFITKVLPEHEYFGDQVKEKLIYYPLVTREPFR-------------------------------NQGRQT-- 191 (257)
T ss_dssp GGGCT-THHHHHTTGGGCTTTHHHHHHHEEEEEEESSSCCS-------------------------------SBSCHH--
T ss_pred HHHhH-hHHHHHHHHHhchhhhccCCCcEEEEEEecCCCcc-------------------------------cCceec--
Confidence 99875 678787 765410 0 1467888888874110 013322
Q ss_pred HHHHH-H-HHh--C--CCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeE-------EEEEecC
Q psy5584 1961 SFLKF-V-QKK--H--SYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYF-------IHHFENF 2013 (2014)
Q Consensus 1961 ~il~~-l-~~~--~--~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~-------~~h~E~F 2013 (2014)
+.+.. . .+. . .......||+|||++|++++++.+.+. |++.- ++|.|.|
T Consensus 192 ~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~l~~~----G~~~~~~~~~~~~i~~E~~ 253 (257)
T 2qdx_A 192 DLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSF----GLKISPRMGEPGDYLIERA 253 (257)
T ss_dssp HHHHHSHHHHHHTCCCCCTTTEEEEEEECHHHHHHHHHHHHHT----TCCBCSSTTSCBSEEEEES
T ss_pred hhhhhhhHHHhcccccCCcCCCEEEEECCHHHHHHHHHHHHHc----CCChHHhcCCCCcEEEeee
Confidence 22211 1 111 1 112467899999999999999999887 55555 8999987
No 22
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.91 E-value=1.9e-23 Score=249.43 Aligned_cols=231 Identities=16% Similarity=0.200 Sum_probs=173.1
Q ss_pred eEeEEEEEEEcCCCEEEEEEecCCCCcccCCCEEEEEecCC-CCCcccccccCCCCCCCeEEEEEEec--CCccHHHHhh
Q psy5584 1732 MALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAF-KNAAYHSFTLTSAPHENFLSCHIKAQ--GPWTWKLRNY 1808 (2014)
Q Consensus 1732 ~~~~v~~v~~l~~~v~~l~~~~p~~~~~~pGQyv~L~~p~~-~~~e~HPFTIaS~p~~~~l~l~Ir~~--G~~T~~L~~~ 1808 (2014)
..++|++++.+++++++++++.|..+.|+|||||.|.+|.. +...+|||||+|+|.++.++|+||.. |.+|+.|.+
T Consensus 17 ~~~~V~~~~~~~~~~~~l~l~~~~~~~~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~~~~~l~v~~~~~G~~s~~l~~- 95 (272)
T 2bgi_A 17 DAQTVTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEFYSIKVPDGPLTSRLQH- 95 (272)
T ss_dssp EEEEEEEEEEEETTEEEEEEECCTTCCCCTTCEEEEEEECTTSCEEEEEEECCSCTTCSEEEEEEECCTTCTTHHHHTT-
T ss_pred EEEEEEEEEEcCCCEEEEEEeCCCCCccCCCCEEEEEeccCCCCeeeeeeeeccCCCCCeEEEEEEEccCCCchhHHHh-
Confidence 46889999999999999999988888999999999999854 45689999999999888999999998 999999863
Q ss_pred hccCCCCCCCCCcEEEEE-CCCCCCCCCcC-CCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCC
Q psy5584 1809 FDPCNFNASEDQPKIRLE-GPFGGGNQDWY-KFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPS 1886 (2014)
Q Consensus 1809 ~~~~~~~~~~~~~~v~Id-GPyG~~~~~~~-~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~ 1886 (2014)
++. +..+.|. ||||.+..+.. .++++|||||||||||++++++++..... .++|+|+|++|+
T Consensus 96 l~~--------Gd~v~v~~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~~~--------~~~v~l~~~~r~ 159 (272)
T 2bgi_A 96 IKV--------GEQIILRPKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAYEK--------FDEVIMMHACRT 159 (272)
T ss_dssp CCT--------TCEEEEEEEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGGTS--------CSEEEEEEEESS
T ss_pred CCC--------CCEEEEeeCCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhcCC--------CCcEEEEEEeCC
Confidence 333 3489999 99999865433 37899999999999999999998765421 258999999999
Q ss_pred cccHHHHHHHHH-HHHhc----CC-CCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHH
Q psy5584 1887 HKHFEWFIDVLR-DVEKK----DV-TNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMS 1960 (2014)
Q Consensus 1887 ~~~l~w~~~~L~-~l~~~----~~-~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~ 1960 (2014)
.+++. |.++|+ ++++. .. ...++++..+|+.... +.||.+
T Consensus 160 ~~~~~-~~~el~~~l~~~~~~~~~~~~~~~~~~~~s~~~~~-------------------------------~~g~v~-- 205 (272)
T 2bgi_A 160 VAELE-YGRQLVEALQEDPLIGELVEGKLKYYPTTTREEFH-------------------------------HMGRIT-- 205 (272)
T ss_dssp SGGGH-HHHHHHHHHHHCTTTTTTSTTTEEEEEEESSSCCS-------------------------------SBCCHH--
T ss_pred HHHhh-HHHHHHHHHHhcchhhcccCCcEEEEEEecCCccc-------------------------------cCceec--
Confidence 99885 778888 88651 11 2578888888874110 013322
Q ss_pred HHHH-HH-HHh---C-CCCCeEEEEEeCChhhHHHHHHHHHhhhcCCC--CCeEEEEEecC
Q psy5584 1961 SFLK-FV-QKK---H-SYVSKIGVFSCGPRPLTKSIMSACEEVNKGRK--LPYFIHHFENF 2013 (2014)
Q Consensus 1961 ~il~-~l-~~~---~-~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g--~~~~~~h~E~F 2013 (2014)
+.+. .. .+. . .+.....||+|||++|++++++.+.+.+.... ....++|.|.|
T Consensus 206 ~~l~~~~l~~~~~~~~~~~~~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~~~~i~~E~f 266 (272)
T 2bgi_A 206 DNLASGKVFEDLGIAPMNPETDRAMVCGSLAFNVDVMKVLESYGLREGANSEPREFVVEKA 266 (272)
T ss_dssp HHHHSCHHHHHHTCCCCCTTTEEEEEEECHHHHHHHHHHHHTTTCCBCBTTBCBSEEEEES
T ss_pred hHHHhhhHhhhcccccCCCCCcEEEEECCHHHHHHHHHHHHHcCCChHHcCCccceEeeee
Confidence 1111 11 110 1 11246789999999999999999988742210 02258999987
No 23
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.90 E-value=3.8e-23 Score=247.41 Aligned_cols=226 Identities=17% Similarity=0.259 Sum_probs=169.3
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCC---CCcccCCCEEEEEecCCCCCcccccccCCCCC-CCeEEEEEEec--------
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPP---NFTYHSGQWVRLACTAFKNAAYHSFTLTSAPH-ENFLSCHIKAQ-------- 1798 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~---~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~-~~~l~l~Ir~~-------- 1798 (2014)
...++|++++.+++++..++|..|. .+.|+|||||.|.+|..+...+|||||+|+|. ++.++|+||..
T Consensus 16 ~~~~~V~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~l~vk~~~~~~~~~~ 95 (275)
T 1umk_A 16 KYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSDDDKGFVDLVIKVYFKDTHPKF 95 (275)
T ss_dssp CEEEEEEEEEECSSSEEEEEEECSSTTCBCCCCTTCEEEEEEEETTEEEEEEECCSSCTTCCSEEEEEEECCCSSSBTTB
T ss_pred cEEEEEEEEEEcCCCeEEEEEEcCCcccccCCCCCcEEEEEEeeCCcEEEeccccCCccCCCCeEEEEEEEeccCccccc
Confidence 4678899999999999999999764 36799999999999866667899999999985 57899999987
Q ss_pred ---CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCC----------------cCCCceEEEEEeccchhhHHHHHH
Q psy5584 1799 ---GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQD----------------WYKFEVAVMVGGGIGVTPYASILN 1859 (2014)
Q Consensus 1799 ---G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~----------------~~~~~~vvlIaGGiGITP~lsiL~ 1859 (2014)
|.+|+.|.+ +..+ ..+.|.||||.+... ....+++|||||||||||++++++
T Consensus 96 ~~~G~~S~~L~~-l~~G--------d~v~v~gP~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~ 166 (275)
T 1umk_A 96 PAGGKMSQYLES-MQIG--------DTIEFRGPSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIR 166 (275)
T ss_dssp TTCCHHHHHHHH-CCTT--------CEEEEEEEECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHH
T ss_pred CCCChhHHHHhc-CCCC--------CEEEEEcCccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHHH
Confidence 889999964 3333 389999999987421 124689999999999999999999
Q ss_pred HHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccc
Q psy5584 1860 DLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRL 1939 (2014)
Q Consensus 1860 ~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~ 1939 (2014)
++..... ..++|+|+|++|+.+++ +|.++|+++.+.. .+.++++..+++....
T Consensus 167 ~l~~~~~-------~~~~v~l~~~~r~~~d~-~~~~el~~l~~~~-~~~~~~~~~~s~~~~~------------------ 219 (275)
T 1umk_A 167 AIMKDPD-------DHTVCHLLFANQTEKDI-LLRPELEELRNKH-SARFKLWYTLDRAPEA------------------ 219 (275)
T ss_dssp HHHTCTT-------CCCEEEEEEEESSGGGC-TTHHHHHHHHHHC-TTTEEEEEEESSCCSS------------------
T ss_pred HHHhCCC-------CCcEEEEEEEcCCHHHh-hHHHHHHHHHHhC-cCcEEEEEEEcCCCcc------------------
Confidence 9976421 23689999999998887 4788899887653 2357776666653211
Q ss_pred cccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeCChhhHH-HHHHHHHhhhcCCCCCeEEEE
Q psy5584 1940 SKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTK-SIMSACEEVNKGRKLPYFIHH 2009 (2014)
Q Consensus 1940 ~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCGP~~m~~-~vr~a~~~~~~~~g~~~~~~h 2009 (2014)
+.| +.||.+-. ++....... .....||+|||++|++ ++++++.+. |++.-++|
T Consensus 220 -----~~~-----~~g~v~~~-~l~~~l~~~--~~~~~vyvCGp~~m~~~~v~~~L~~~----G~~~~~I~ 273 (275)
T 1umk_A 220 -----WDY-----GQGFVNEE-MIRDHLPPP--EEEPLVLMCGPPPMIQYACLPNLDHV----GHPTERCF 273 (275)
T ss_dssp -----CSS-----EESSCCHH-HHHHHSCCG--GGCCEEEEESCHHHHHHTTHHHHHHH----TCCGGGEE
T ss_pred -----ccC-----ccCccCHH-HHHHhcCCC--CCCeEEEEECCHHHHHHHHHHHHHHc----CCCHHHEE
Confidence 112 12777632 333322111 1356799999999999 999999987 55544444
No 24
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.89 E-value=8.7e-23 Score=249.39 Aligned_cols=212 Identities=19% Similarity=0.288 Sum_probs=166.6
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCCC---CcccCCCEEEEEecCCCCCcccccccCCCCCC-CeEEEEEEec--CC-ccH
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPPN---FTYHSGQWVRLACTAFKNAAYHSFTLTSAPHE-NFLSCHIKAQ--GP-WTW 1803 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~~---~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~-~~l~l~Ir~~--G~-~T~ 1803 (2014)
++.++|++++.+++++++++|..|.. ..|+|||||.|.+|. ..+|||||+|+|.+ +.++|+||.. |. +|+
T Consensus 8 ~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~---g~~R~ySi~s~~~~~~~l~i~Vk~~~~G~g~S~ 84 (321)
T 2pia_A 8 FLRLKIASKEKIARDIWSFELTDPQGAPLPPFEAGANLTVAVPN---GSRRTYSLCNDSQERNRYVIAVKRDSNGRGGSI 84 (321)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECTTCCCCCCCCTTCEEEEECTT---SCEEEEECCSCTTCCSEEEEEEECCTTSCSHHH
T ss_pred cEEEEEEEEEEcCCCEEEEEEEcCCCCcCCCCCCCCEEEEECCC---CCcEEEEeCCCCCCCCeEEEEEEEecCCcchhH
Confidence 46688999999999999999998763 379999999999984 28999999999865 6899999976 65 899
Q ss_pred HHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEE
Q psy5584 1804 KLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWI 1883 (2014)
Q Consensus 1804 ~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~ 1883 (2014)
.|++.++.+ ..+.|.||||.+..+. .++++|||||||||||++|+++++.... .++++|+|+
T Consensus 85 ~L~~~l~~G--------d~v~v~gP~g~f~l~~-~~~~~vliagG~GItP~~s~l~~l~~~~---------~~~v~l~~~ 146 (321)
T 2pia_A 85 SFIDDTSEG--------DAVEVSLPRNEFPLDK-RAKSFILVAGGIGITPMLSMARQLRAEG---------LRSFRLYYL 146 (321)
T ss_dssp HHHHSCCTT--------CEEEECCCBCCSCCCT-TCSEEEEEEEGGGHHHHHHHHHHHHHHC---------SSEEEEEEE
T ss_pred HHHhcCCCC--------CEEEEeCCccccccCC-CCCCEEEEEecccHhHHHHHHHHHHHcC---------CCcEEEEEE
Confidence 998665554 3899999999987543 4789999999999999999999998752 158999999
Q ss_pred eCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHH
Q psy5584 1884 CPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFL 1963 (2014)
Q Consensus 1884 ~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il 1963 (2014)
+|+.+++. |.++|.+++ ....+++ +.+... ..||++..+++
T Consensus 147 ~r~~~~~~-~~~el~~l~---~~~~~~~--~~~~~~---------------------------------~~g~~~~~~ll 187 (321)
T 2pia_A 147 TRDPEGTA-FFDELTSDE---WRSDVKI--HHDHGD---------------------------------PTKAFDFWSVF 187 (321)
T ss_dssp ESCGGGCT-THHHHHSTT---TTTTEEE--EECTTC---------------------------------TTSCCCHHHHH
T ss_pred ECChhhhH-HHHHHhcCc---cCCeEEE--EECCCc---------------------------------ccCccCHHHHh
Confidence 99999875 677777664 1234444 333310 01677766655
Q ss_pred HHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecCC
Q psy5584 1964 KFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENFG 2014 (2014)
Q Consensus 1964 ~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~Fg 2014 (2014)
.. .+ ....||+|||++|++++++++.+ ++..++|.|.|+
T Consensus 188 ~~----~~--~~~~vyvCGP~~m~~~v~~~l~~------~~~~~i~~E~F~ 226 (321)
T 2pia_A 188 EK----SK--PAQHVYCCGPQALMDTVRDMTGH------WPSGTVHFESFG 226 (321)
T ss_dssp SS----CC--TTEEEEEESCHHHHHHHHHHTTT------SCTTCEEEECCC
T ss_pred cc----cC--CCCEEEEECCHHHHHHHHHHHHh------CCHhhEEEEecC
Confidence 32 22 35789999999999999999876 245579999995
No 25
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=99.89 E-value=4e-22 Score=242.03 Aligned_cols=231 Identities=17% Similarity=0.271 Sum_probs=167.5
Q ss_pred eeEeEEEEEEEcCC-----CEEEEEEecCC-CCcccCCCEEEEEecCCC----CCcccccccCCCCC-----CCeEEEEE
Q psy5584 1731 YMALDILETELLPS-----DVIKIRFYRPP-NFTYHSGQWVRLACTAFK----NAAYHSFTLTSAPH-----ENFLSCHI 1795 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~-----~v~~l~~~~p~-~~~~~pGQyv~L~~p~~~----~~e~HPFTIaS~p~-----~~~l~l~I 1795 (2014)
.+.++|++.+.+++ ++.+++|..|. .+.|+|||||.|.+|... ...+|||||+|+|. ++.++|+|
T Consensus 21 ~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySias~~~~~~~~~~~l~l~V 100 (304)
T 2bmw_A 21 PFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDKNGKPEKLRLYSIASTRHGDDVDDKTISLCV 100 (304)
T ss_dssp CEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCTTSCBCCCEEEEBCSCTTTTTTSSSEEEEEE
T ss_pred CEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcccCCCCCCcceecCCCCcccCCCCCEEEEEE
Confidence 35688999999998 89999999774 578999999999988642 35789999999985 57899999
Q ss_pred Ee------------cCCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCC-CcCCCceEEEEEeccchhhHHHHHHHHH
Q psy5584 1796 KA------------QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQ-DWYKFEVAVMVGGGIGVTPYASILNDLV 1862 (2014)
Q Consensus 1796 r~------------~G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~-~~~~~~~vvlIaGGiGITP~lsiL~~l~ 1862 (2014)
|. .|.+|+.|.+ +.. +..+.|.||||.+.. +....+++|||||||||||++|+|++++
T Consensus 101 k~~~y~~~~~~~~~~G~~S~~L~~-l~~--------Gd~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~ 171 (304)
T 2bmw_A 101 RQLEYKHPESGETVYGVCSTYLTH-IEP--------GSEVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMF 171 (304)
T ss_dssp ECCEECSSSSSSCEECHHHHHHHT-CCT--------TCEEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred EEEEeeccccCcCCCcchhhHHhc-CCC--------CCEEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHH
Confidence 97 4778999886 333 338999999998753 2235689999999999999999999987
Q ss_pred hccCCCCC-CCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccc
Q psy5584 1863 FGTSTNRY-SGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSK 1941 (2014)
Q Consensus 1863 ~~~~~~~~-~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~ 1941 (2014)
........ .....++|+|+|++|+.+++ +|.++|.++.+.. ...++++.++|+.....+
T Consensus 172 ~~~~~~~~~~~~~~~~v~l~~g~r~~~d~-~~~~el~~~~~~~-~~~~~~~~~~s~~~~~~~------------------ 231 (304)
T 2bmw_A 172 KDAERAANPEYQFKGFSWLVFGVPTTPNI-LYKEELEEIQQKY-PDNFRLTYAISREQKNPQ------------------ 231 (304)
T ss_dssp CHHHHHHCTTCCCCSCEEEEEEESSGGGC-TTHHHHHHHHHHC-TTTEEEEEEETTTCBCTT------------------
T ss_pred HhhhhhcccccccCCCEEEEEEeCChHhc-chHHHHHHHHHhC-CCcEEEEEEEcCCCCCCC------------------
Confidence 65310000 00113589999999998887 5888999887642 236888888887532110
Q ss_pred cccccCcccccccCCCCHHHHHH----HHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCC
Q psy5584 1942 SSMFTGLKAVNHFGRPDMSSFLK----FVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKL 2003 (2014)
Q Consensus 1942 ~~~~tgl~~~~~~GRPd~~~il~----~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~ 2003 (2014)
| ||..+...+. .+.+.... ....||+|||++|+++|++++.+.....|+
T Consensus 232 -----~-------~~~~v~~~l~~~~~~l~~~~~~-~~~~vyvCGp~~m~~~v~~~l~~~~~~~g~ 284 (304)
T 2bmw_A 232 -----G-------GRMYIQDRVAEHADQLWQLIKN-QKTHTYICGPPPMEEGIDAALSAAAAKEGV 284 (304)
T ss_dssp -----S-------SBCCHHHHHHHTHHHHHHHHTS-TTEEEEEEECTTHHHHHHHHHHHHHHTTTC
T ss_pred -----C-------CcceehHHHHHhHHHHHHHhhc-CCcEEEEECCHHHHHHHHHHHHHHHHHcCc
Confidence 1 2333333332 22221111 256799999999999999998776544443
No 26
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=99.89 E-value=6.9e-22 Score=241.00 Aligned_cols=227 Identities=14% Similarity=0.210 Sum_probs=168.2
Q ss_pred eeEeEEEEEEEcCC-----CEEEEEEecCCCCcccCCCEEEEEecCCC----CCcccccccCCCCC-----CCeEEEEEE
Q psy5584 1731 YMALDILETELLPS-----DVIKIRFYRPPNFTYHSGQWVRLACTAFK----NAAYHSFTLTSAPH-----ENFLSCHIK 1796 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~-----~v~~l~~~~p~~~~~~pGQyv~L~~p~~~----~~e~HPFTIaS~p~-----~~~l~l~Ir 1796 (2014)
.+.++|++++.+++ ++.+|+|..|..+.|+|||||.|.+|..+ ...+|||||+|+|. .+.++|+||
T Consensus 37 ~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk 116 (314)
T 1fnb_A 37 PYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVK 116 (314)
T ss_dssp CEEEEEEEEEECSCSSSSSCEEEEEEECTTCCCCCTTCEEEEECSSBCTTSSBCCCEEEECCSCSSCTTSSSCEEEEEEE
T ss_pred CEEEEEEEEEEecCCCCCCcEEEEEEecCCCCCcCCCCEEEEecCCCCcCCCcCCceeEecCCCCcccCCCCCEEEEEEE
Confidence 35688999999987 89999999887789999999999998642 35789999999985 478999999
Q ss_pred ec-----------CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCC-cCCCceEEEEEeccchhhHHHHHHHHHhc
Q psy5584 1797 AQ-----------GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQD-WYKFEVAVMVGGGIGVTPYASILNDLVFG 1864 (2014)
Q Consensus 1797 ~~-----------G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~-~~~~~~vvlIaGGiGITP~lsiL~~l~~~ 1864 (2014)
.. |.+|+.|.+ +..+ ..+.|.||||.+... ....+++|||||||||||++|+|++++..
T Consensus 117 ~~~y~~~~g~~~~G~~S~~L~~-l~~G--------d~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~ 187 (314)
T 1fnb_A 117 RLIYTNDAGETIKGVCSNFLCD-LKPG--------AEVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFE 187 (314)
T ss_dssp CCEEECTTSCEEECHHHHHHHH-CCTT--------CEEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTC
T ss_pred EEEeccCCCCcCCCchhhHhhc-CCCC--------CEEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHh
Confidence 73 778999987 3433 389999999987532 23468999999999999999999999865
Q ss_pred cCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhccccccccccc
Q psy5584 1865 TSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSM 1944 (2014)
Q Consensus 1865 ~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~ 1944 (2014)
.... .....+++|+|++|+.+++. |.++|+++.+.. ...++++..+|+....+
T Consensus 188 ~~~~---~~~~~~v~L~~g~R~~~d~~-~~~el~~l~~~~-~~~~~~~~~~s~~~~~~---------------------- 240 (314)
T 1fnb_A 188 KHDD---YKFNGLAWLFLGVPTSSSLL-YKEEFEKMKEKA-PDNFRLDFAVSREQTNE---------------------- 240 (314)
T ss_dssp CBTT---BCCCSEEEEEEEESSGGGCC-SHHHHHHHHHHC-TTTEEEEEEETTTCBCT----------------------
T ss_pred cccc---ccCCCCEEEEEecCCHHHhh-hHHHHHHHHHhC-CCcEEEEEEECCCCccc----------------------
Confidence 3211 11135899999999998874 788898887643 23688888888753211
Q ss_pred ccCcccccccCCCCHHHHHH----HHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCC
Q psy5584 1945 FTGLKAVNHFGRPDMSSFLK----FVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRK 2002 (2014)
Q Consensus 1945 ~tgl~~~~~~GRPd~~~il~----~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g 2002 (2014)
.| ++..+.+.+. .+.+.... ....||+|||++|+++|++++.+.....|
T Consensus 241 -~g-------~~~~v~~~l~~~~~~~~~~~~~-~~~~vyvCGp~~m~~~v~~~L~~~~~~~g 293 (314)
T 1fnb_A 241 -KG-------EKMYIQTRMAQYAVELWEMLKK-DNTYVYMCGLKGMEKGIDDIMVSLAAAEG 293 (314)
T ss_dssp -TC-------CBCCHHHHHHTTHHHHHHHTTS-TTEEEEEEECTTHHHHHHHHHHHHHHTTT
T ss_pred -CC-------CceechHHHHHhHHHHHHHHhc-CCeEEEEECCHHHHHHHHHHHHHHHHHhC
Confidence 11 1222333332 22222211 25679999999999999999988765444
No 27
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.88 E-value=3.3e-22 Score=238.67 Aligned_cols=222 Identities=18% Similarity=0.212 Sum_probs=164.1
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCC---CCcccCCCEEEEEecCCCCCcccccccCCCCC-CCeEEEEEEec--------
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPP---NFTYHSGQWVRLACTAFKNAAYHSFTLTSAPH-ENFLSCHIKAQ-------- 1798 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~---~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~-~~~l~l~Ir~~-------- 1798 (2014)
...++|++++.+++++.+++|..|. .+.|+|||||+|.++..+...+|||||+|+|. ++.++|+||..
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~~~~~~l~vk~~~~~~~~~~ 91 (270)
T 2cnd_A 12 RIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMVDEIGHFDLLVKVYFKNEHPKF 91 (270)
T ss_dssp CEEEEEEEEEEEETTEEEEEEECSSTTCCCCCCTTCEEEEEEEETTEEEEEEECCCSCTTCCSEEEEEEECCCSSCBTTB
T ss_pred eEEEEEEEEEEeCCCeEEEEEECCCCccccCCCCCCEEEEEeeeCCcEEEEeeccCCCccCCCEEEEEEEEeccCccccc
Confidence 4678899999999999999998775 46799999999998866667899999999986 48899999974
Q ss_pred ---CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCC--------CCc--CCCceEEEEEeccchhhHHHHHHHHHhcc
Q psy5584 1799 ---GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGN--------QDW--YKFEVAVMVGGGIGVTPYASILNDLVFGT 1865 (2014)
Q Consensus 1799 ---G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~--------~~~--~~~~~vvlIaGGiGITP~lsiL~~l~~~~ 1865 (2014)
|.+|+.|. .++.+ ..+.|.||||.+. .+. ...+++|||||||||||++++++++....
T Consensus 92 ~~~G~~s~~l~-~l~~G--------d~v~v~gP~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~ 162 (270)
T 2cnd_A 92 PNGGLMTQYLD-SLPVG--------SYIDVKGPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQ 162 (270)
T ss_dssp TTCCHHHHHHH-HCCTT--------CEEEEEEEECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTT
T ss_pred CCCCchhhHHh-cCCCC--------CEEEEECCcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcC
Confidence 77899885 34433 3899999999732 111 24689999999999999999999998652
Q ss_pred CCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccc
Q psy5584 1866 STNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMF 1945 (2014)
Q Consensus 1866 ~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~ 1945 (2014)
. ...++|+|+|++|+.+++. +.++|+++++.. .+.++++..+++..... +.+
T Consensus 163 ~------~~~~~v~l~~~~r~~~d~~-~~~el~~l~~~~-~~~~~~~~~~s~~~~~~--------------------~~~ 214 (270)
T 2cnd_A 163 P------EDHTEMHLVYANRTEDDIL-LRDELDRWAAEY-PDRLKVWYVIDQVKRPE--------------------EGW 214 (270)
T ss_dssp T------TCCCEEEEEEEESCGGGCT-THHHHHHHHHHC-TTTEEEEEEESCCSCGG--------------------GCC
T ss_pred C------CCCcEEEEEEEcCCHHHcc-hHHHHHHHHHHC-cCcEEEEEEECCCCCCC--------------------CCc
Confidence 1 1236899999999999874 778898887653 23677777776531100 011
Q ss_pred cCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeCChhhHHH-HHHHHHhh
Q psy5584 1946 TGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKS-IMSACEEV 1997 (2014)
Q Consensus 1946 tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCGP~~m~~~-vr~a~~~~ 1997 (2014)
.| +.||.+-. +++...... .....||+|||++|+++ +++.+.+.
T Consensus 215 ~~-----~~g~v~~~-~l~~~l~~~--~~~~~vyvCGp~~m~~~~~~~~L~~~ 259 (270)
T 2cnd_A 215 KY-----SVGFVTEA-VLREHVPEG--GDDTLALACGPPPMIQFAISPNLEKM 259 (270)
T ss_dssp CS-----EESSCCHH-HHHHHSCCC--SSSEEEEEECCHHHHHTTTHHHHHTT
T ss_pred cc-----ccccCCHH-HHHHhcCCC--cCCEEEEEECCHHHHHHHHHHHHHHc
Confidence 12 23777732 333322111 13567999999999997 58888876
No 28
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=99.88 E-value=8.5e-22 Score=247.15 Aligned_cols=226 Identities=15% Similarity=0.207 Sum_probs=167.8
Q ss_pred eeEeEEEEEEEcCC-----CEEEEEEecCC-CCcccCCCEEEEEecCCC----CCcccccccCCCCC-----CCeEEEEE
Q psy5584 1731 YMALDILETELLPS-----DVIKIRFYRPP-NFTYHSGQWVRLACTAFK----NAAYHSFTLTSAPH-----ENFLSCHI 1795 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~-----~v~~l~~~~p~-~~~~~pGQyv~L~~p~~~----~~e~HPFTIaS~p~-----~~~l~l~I 1795 (2014)
.+.++|++++.+++ ++.+|+|..|. .+.|+|||||.|.+|... .+.+|||||+|+|. ++.++|+|
T Consensus 122 ~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~R~ySIas~p~~~~~~~~~l~l~V 201 (402)
T 2b5o_A 122 PFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCV 201 (402)
T ss_dssp CEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEETTTEECCCEEEEBCSCTTTTTTSSCEEEEEE
T ss_pred CEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCCcCCCccCceeeeccCCCccccCCCCEEEEEE
Confidence 35688999999998 99999999875 488999999999988642 35799999999986 57899999
Q ss_pred Ee------------cCCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCC-CcCCCceEEEEEeccchhhHHHHHHHHH
Q psy5584 1796 KA------------QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQ-DWYKFEVAVMVGGGIGVTPYASILNDLV 1862 (2014)
Q Consensus 1796 r~------------~G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~-~~~~~~~vvlIaGGiGITP~lsiL~~l~ 1862 (2014)
|. .|.+|+.|.+ +..+. ..+.|.||||.+.. +....+++|||||||||||++++|++++
T Consensus 202 k~~~y~~~~~~~~~~G~~S~~L~~-l~~G~-------d~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~ 273 (402)
T 2b5o_A 202 RQLEYQDPESGETVYGVCSTYLCN-LPVGT-------DDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMF 273 (402)
T ss_dssp ECCEEECTTTCCEEECHHHHHHHT-CCTTC-------CCEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHH
T ss_pred EEeeecccccCcCCCCchhHHHhh-CCCCC-------ceEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHH
Confidence 98 4778998886 33330 37999999999753 2234689999999999999999999998
Q ss_pred hccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhccccccccc
Q psy5584 1863 FGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKS 1942 (2014)
Q Consensus 1863 ~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~ 1942 (2014)
...... ....++|+|+|++|+.+++ +|.++|+++.+.. ...+++++++++....+
T Consensus 274 ~~~~~~---~~~~~~v~L~~g~R~~~d~-~~~~eL~~l~~~~-~~~~~v~~~~S~~~~~~-------------------- 328 (402)
T 2b5o_A 274 KEQHED---YKFKGKAWLIFGVPYTANI-LYKDDFEKMAAEN-PDNFRLTYAISREQKTA-------------------- 328 (402)
T ss_dssp TCCCSS---CCCCSEEEEEEEESSGGGC-TTHHHHHHHHHHC-TTTEEEEEEETTTCBCT--------------------
T ss_pred Hhcccc---ccccCCEEEEEecCCHHHh-HHHHHHHHHHHhC-CCcEEEEEEECCCCccc--------------------
Confidence 653211 1123689999999999876 4889999887653 23688988888753211
Q ss_pred ccccCcccccccCCCCHHHHHHH----HHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcC
Q psy5584 1943 SMFTGLKAVNHFGRPDMSSFLKF----VQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKG 2000 (2014)
Q Consensus 1943 ~~~tgl~~~~~~GRPd~~~il~~----l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~ 2000 (2014)
.| ++..+...+.. +.+..+. ....||+|||++|+++|++++.+.+..
T Consensus 329 ---~g-------~~~~v~~~l~~~~~~l~~~l~~-~~~~vyvCGP~~M~~~v~~~L~~~g~~ 379 (402)
T 2b5o_A 329 ---DG-------GKVYVQSRVSEYADELFEMIQK-PNTHVYMCGLKGMQPPIDETFTAEAEK 379 (402)
T ss_dssp ---TS-------CBCCHHHHHHHTHHHHHHHHTS-TTEEEEEEECGGGHHHHHHHHHHHHHH
T ss_pred ---CC-------CccchHHHHHHhHHHHHHHhcc-CCcEEEEECCHHHHHHHHHHHHHHHHH
Confidence 11 22333333322 2111111 256799999999999999999887643
No 29
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=99.87 E-value=6.2e-22 Score=241.46 Aligned_cols=229 Identities=17% Similarity=0.265 Sum_probs=167.1
Q ss_pred eeEeEEEEEEEcCCC--------------EEEEEEecCCC-CcccCCCEEEEEecCCC----C-------CcccccccCC
Q psy5584 1731 YMALDILETELLPSD--------------VIKIRFYRPPN-FTYHSGQWVRLACTAFK----N-------AAYHSFTLTS 1784 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~--------------v~~l~~~~p~~-~~~~pGQyv~L~~p~~~----~-------~e~HPFTIaS 1784 (2014)
.+.++|++++.++++ +.+|+|..|.. +.|+|||||.|.+|... . +.+|||||+|
T Consensus 21 ~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~g~~~~~~~~~~~~R~ySi~s 100 (314)
T 2rc5_A 21 PYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPEKKAKGLADVGYTVRLYSIAS 100 (314)
T ss_dssp CEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHHHHHTTCSCCBCCCEEEECCS
T ss_pred CEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccccCccchhhcCCCceeeeccC
Confidence 456889999999987 99999998764 88999999999998652 2 4789999999
Q ss_pred CCC-----CCeEEEEEEec------------CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCc--CCCceEEEE
Q psy5584 1785 APH-----ENFLSCHIKAQ------------GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDW--YKFEVAVMV 1845 (2014)
Q Consensus 1785 ~p~-----~~~l~l~Ir~~------------G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~--~~~~~vvlI 1845 (2014)
+|. ++.++|+||.. |.+|+.|.+ +..+ .++.|.||||.+.... ...+++|||
T Consensus 101 ~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~L~~-l~~G--------d~v~v~gP~G~~~~~~~~~~~~~~vlI 171 (314)
T 2rc5_A 101 PSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNYMCD-LKPG--------DEVTMTGPSGKKFLLPNTDFSGDIMFL 171 (314)
T ss_dssp CTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHHHHT-CCTT--------CEEEEEEEECSSSCCCSSCBCSCEEEE
T ss_pred CccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHHHhc-CCCc--------CEEEEEeccCCceeCCCCCCCCCEEEE
Confidence 985 57899999984 558999887 4443 3899999999976432 247899999
Q ss_pred EeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcc
Q psy5584 1846 GGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLR 1925 (2014)
Q Consensus 1846 aGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~ 1925 (2014)
||||||||++|+++++...... ....+|+|+|++|+.+++ +|.++|+++.+.. ..++++.++|+.....
T Consensus 172 agGtGIaP~~s~l~~l~~~~~~-----~~~~~v~l~~g~r~~~d~-~~~~el~~l~~~~--~~~~~~~~~s~~~~~~--- 240 (314)
T 2rc5_A 172 ATGTGIAPFIGMSEELLEHKLI-----KFTGNITLVYGAPYSDEL-VMMDYLKGLESKH--KNFKLITAISREEKNS--- 240 (314)
T ss_dssp EEGGGGHHHHHHHHHHHTTCSS-----CBCSCEEEEEEESSGGGS-CSHHHHHHHHHHH--SSEEEEEEETTTCBCT---
T ss_pred ECCccHHHHHHHHHHHHHhccc-----CCCCcEEEEEEeCCHHHH-hHHHHHHHHHHhC--CcEEEEEEECCCCCcc---
Confidence 9999999999999999865210 123579999999999886 5788899887543 3688888888752210
Q ss_pred hhhhhhhhcccccccccccccCcccccccCCCCHHHHHHH----HHHhCCCCCeEEEEEe-CChhhHHHHHHHHHhhhcC
Q psy5584 1926 TTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKF----VQKKHSYVSKIGVFSC-GPRPLTKSIMSACEEVNKG 2000 (2014)
Q Consensus 1926 ~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~----l~~~~~~~~~v~V~vC-GP~~m~~~vr~a~~~~~~~ 2000 (2014)
+.| ++..+.+.+.. +.+..+. ... +|+| ||++|+++|++++.+.+.
T Consensus 241 -------------------~~g-------~~~~v~~~l~~~~~~l~~~~~~-~~~-~yvCGGp~~m~~~v~~~L~~~g~- 291 (314)
T 2rc5_A 241 -------------------FDG-------GRMYISHRVREQAEAVKKILNG-GGR-FYICGGPKGMEKGVIEEIQKISG- 291 (314)
T ss_dssp -------------------TTS-------SBCCHHHHHHHTHHHHHHHHHH-TCE-EEEEESSTTTHHHHHHHHHHHHT-
T ss_pred -------------------cCC-------CceehhHHHHHhHHHHHHHhhc-CCe-EEEeCCcHHHHHHHHHHHHHHHh-
Confidence 011 12222332222 1111100 122 5999 999999999999998743
Q ss_pred CCCCeEEEEEecC
Q psy5584 2001 RKLPYFIHHFENF 2013 (2014)
Q Consensus 2001 ~g~~~~~~h~E~F 2013 (2014)
-.+|+|.|
T Consensus 292 -----~~i~~e~f 299 (314)
T 2rc5_A 292 -----NTGTYEEF 299 (314)
T ss_dssp -----CCSCHHHH
T ss_pred -----ccchHHHH
Confidence 13566665
No 30
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.87 E-value=3e-22 Score=224.96 Aligned_cols=179 Identities=33% Similarity=0.682 Sum_probs=129.0
Q ss_pred EEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhc
Q psy5584 1824 RLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKK 1903 (2014)
Q Consensus 1824 ~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~ 1903 (2014)
.|+||||.+..+...++++|||||||||||++|++++++.....+ ......++|+|+|++|+.+++.||.++|.++.+.
T Consensus 2 ~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~-~~~~~~~~v~l~~~~r~~~~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 2 AVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNN-ATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQ 80 (186)
T ss_dssp CTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHC-TTCCCCCEEEEEEEESCTTTTHHHHHHHHHHHHH
T ss_pred eEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhc-ccCCCCcEEEEEEEECCcchHHHHHHHHHHHHHH
Confidence 578999998755567899999999999999999999998753110 0012347999999999999999999999998764
Q ss_pred ----CCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEE
Q psy5584 1904 ----DVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVF 1979 (2014)
Q Consensus 1904 ----~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~ 1979 (2014)
.....+++++|+|+.... +....++ +...+.+..+|++..++.|||+++.+++.+....++ .++.||
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~~~-~~~~~~~-------~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~-~~~~v~ 151 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWDES-QANHFAV-------HHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPN-TRIGVF 151 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-------------------------------CCEEESCCCHHHHHHHHHHHSTT-CEEEEE
T ss_pred HhhccCCCeEEEEEEEcCCCCC-cccceee-------ccccccccCCCCccccccCCCCHHHHHHHHHHhCCC-CcEEEE
Confidence 123479999999985321 1111100 000112334566677888999999999888776543 478999
Q ss_pred EeCChhhHHHHHHHHHhhhc--CCCCCeEEEEEecC
Q psy5584 1980 SCGPRPLTKSIMSACEEVNK--GRKLPYFIHHFENF 2013 (2014)
Q Consensus 1980 vCGP~~m~~~vr~a~~~~~~--~~g~~~~~~h~E~F 2013 (2014)
+|||++|+++|++++.+.+. ..+ ..+.+|+|+|
T Consensus 152 ~CGP~~m~~~v~~~l~~~g~~~~~~-~~~~~~~E~F 186 (186)
T 3a1f_A 152 LCGPEALAETLSKQSISNSESGPRG-VHFIFNKENF 186 (186)
T ss_dssp EESCHHHHHHHHHHHHHTCCCSTTC-CEEEEECCCC
T ss_pred EeCCHHHHHHHHHHHHHhhccCCCC-CEEEEEeccC
Confidence 99999999999999999876 345 5799999998
No 31
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.87 E-value=7.9e-22 Score=234.06 Aligned_cols=212 Identities=14% Similarity=0.186 Sum_probs=158.9
Q ss_pred eEeEEEEEEEcCCCEEEEEEecCC-CCcccCCCEEEEEecCCCCCcccccccCCCCC-CCeEEEEEEe--cCCccHHHHh
Q psy5584 1732 MALDILETELLPSDVIKIRFYRPP-NFTYHSGQWVRLACTAFKNAAYHSFTLTSAPH-ENFLSCHIKA--QGPWTWKLRN 1807 (2014)
Q Consensus 1732 ~~~~v~~v~~l~~~v~~l~~~~p~-~~~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~-~~~l~l~Ir~--~G~~T~~L~~ 1807 (2014)
..++|++++.+++++.+++|+.|. ...|+||||+.|.+|..+...+|||||+|+|. ++.++|+||. .|.+|+.|.+
T Consensus 6 ~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~~~~l~~~vk~~~~G~~S~~l~~ 85 (262)
T 1ep3_B 6 EMMTVVSQREVAYNIFEMVLKGTLVDEMDLPGQFLHLAVPNGAMLLRRPISISSWDKRAKTCTILYRIGDETTGTYKLSK 85 (262)
T ss_dssp EEEEEEEEEEEETTEEEEEEESGGGGGCCSTTCEEEECCSCTTCCSCEEEECCEEETTTTEEEEEEECCCTTSHHHHHHT
T ss_pred cceEEEEEEEecCCEEEEEEEcCcccccCCCCceEEEEcCCCCceeeEEEEeeeecCCCCEEEEEEEEecCCchHHHHhc
Confidence 468899999999999999999876 46799999999999876568899999999985 6889999999 8999998873
Q ss_pred hhccCCCCCCCCCcEEEEECCCCC-CCCCcC-CCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeC
Q psy5584 1808 YFDPCNFNASEDQPKIRLEGPFGG-GNQDWY-KFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICP 1885 (2014)
Q Consensus 1808 ~~~~~~~~~~~~~~~v~IdGPyG~-~~~~~~-~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R 1885 (2014)
++. +.++.|.||||. +..+.. ..+++|||||||||||++|+++++.... ++++|+|++|
T Consensus 86 -l~~--------Gd~v~v~gP~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~~----------~~v~l~~~~r 146 (262)
T 1ep3_B 86 -LES--------GAKVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKTG----------CQMTILLGFA 146 (262)
T ss_dssp -CCT--------TCEEEEEEEESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHHT----------CEEEEEEEES
T ss_pred -CCC--------CCEEEEEcccCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHcC----------CeEEEEEEcC
Confidence 333 338999999999 554322 3789999999999999999999998651 4899999999
Q ss_pred CcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHH
Q psy5584 1886 SHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKF 1965 (2014)
Q Consensus 1886 ~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~ 1965 (2014)
+.+++. +.++|++++.. ++++. ++. . +.|. .|| +.+++..
T Consensus 147 ~~~~~~-~~~el~~l~~~------~~~~~-~~~-~------------------------~~~~-----~g~--v~~~l~~ 186 (262)
T 1ep3_B 147 SENVKI-LENEFSNLKNV------TLKIA-TDD-G------------------------SYGT-----KGH--VGMLMNE 186 (262)
T ss_dssp SGGGCC-CHHHHHTSTTE------EEEEE-ETT-C------------------------SSSE-----ESC--HHHHHHH
T ss_pred CHHHhh-hHHHHhhhccC------cEEEE-ECC-C------------------------CCcc-----eee--hHHHHHh
Confidence 999875 66766654321 33332 221 0 0010 133 2233332
Q ss_pred HHHhCCCCCeEEEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecC
Q psy5584 1966 VQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENF 2013 (2014)
Q Consensus 1966 l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~F 2013 (2014)
. .+. ...||+|||++|++++++ +.+. |++ .+++.|.+
T Consensus 187 ~---~~~--~~~vyvCGp~~m~~~v~~-l~~~----gv~-~~vs~e~~ 223 (262)
T 1ep3_B 187 I---DFE--VDALYTCGAPAMLKAVAK-KYDQ----LER-LYISMESR 223 (262)
T ss_dssp C---CSC--CSEEEEESCHHHHHHHHH-HTTT----CSS-EEEECCCC
T ss_pred h---ccC--CCEEEEECCHHHHHHHHH-HHhC----CCC-EEEEeccc
Confidence 1 222 346999999999999999 8665 655 67887764
No 32
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.87 E-value=7.1e-24 Score=293.24 Aligned_cols=341 Identities=15% Similarity=0.156 Sum_probs=217.2
Q ss_pred CeeEEEeCCCCCeEEEEEcccCCCCCCCCeEEEEEccCcceEEeecChh--HHHHHHHHHhhcccccccccccccccHHH
Q psy5584 1070 EKLRTVNFKNCDTVTIEESQPERGKKKHPMVLIRVHRDHDLVLEFDSLA--ARKKFMNKMEGFLNAMKKHLIIVQSPREL 1147 (2014)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlPF~~~~--~~~~~~~Il~~~~~f~~~~~~~vs~~~kd 1147 (2014)
...++..|.|.|+|+.++ +||||.|+|+|.+.++ +.+++++|+........+....++....+
T Consensus 459 ~~~~~~~~~~~Rev~~~~---------------~L~pG~Y~IVPst~~p~~e~~F~Lrv~s~~~~~~~eld~~~~~~~~~ 523 (900)
T 1qxp_A 459 SRAQSEHFINLREVSNRI---------------RLPPGEYIVVPSTFEPNKEGDFLLRFFSEKKAGTQELDDQIQANLPD 523 (900)
T ss_dssp CCSBCSSCBSSSCEEEEE---------------ECCSEEEEEEEEESSSSCCEEEEEEEEESSCEEECCBCCCCEESCC-
T ss_pred CccccCCccccCceeEeE---------------EeCCCCEEEEeecCCCCCCCCceEEEeccCCcceeecCccccccCCc
Confidence 456777899999999988 8999999999988765 56677777665443333333333222111
Q ss_pred HHHhhcCHHHHHHHHHHHHHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHHhCC-----------CCcHHHHH
Q psy5584 1148 MLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM-----------KSDAVFVR 1216 (2014)
Q Consensus 1148 li~~~L~~~~~~r~L~h~~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~L~~-----------~~~~~~l~ 1216 (2014)
.+.++.++..+ .++++|. .+| +++ +.|+.+||+.+|.. ..+.++++
T Consensus 524 --~~~l~~~e~~~----~l~~~F~-~~D-~~d---------------G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~ 580 (900)
T 1qxp_A 524 --EKVLSEEEIDD----NFKTLFS-KLA-GDD---------------MEISVKELQTILNRIISKHKDLRTNGFSLESCR 580 (900)
T ss_dssp -----------------------C-CCC-CSS---------------SSCCCSCTTTTTCC---------CCCCCHHHHH
T ss_pred --ccCCCcchHHH----HHHHHHH-HHc-CCC---------------CcCCHHHHHHHHHHhhcccccccCCCCCHHHHH
Confidence 11234333222 2556676 366 554 78899999887643 57889999
Q ss_pred HHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q psy5584 1217 MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1296 (2014)
Q Consensus 1217 ~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i 1296 (2014)
.+|+.+|.|++|.|+++||..++..+ ++++.+|+.+|.|++|.|+.+||..++..++ ..+++.++..++
T Consensus 581 ~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g-----~~l~~~~~~~l~ 649 (900)
T 1qxp_A 581 SMVNLMDRDGNGKLGLVEFNILWNRI------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAG-----FKLPCQLHQVIV 649 (900)
T ss_dssp HHHHHHCC--CCCCCSSSHHHHHHHH------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTT-----EECCHHHHHHHH
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhC-----CCCCHHHHHHHH
Confidence 99999999999999999999998775 7899999999999999999999999998743 356788888887
Q ss_pred HhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCcc-----------------------------------
Q psy5584 1297 DGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKR----------------------------------- 1341 (2014)
Q Consensus 1297 ~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~----------------------------------- 1341 (2014)
..+.................. ...+..+|..++....+...
T Consensus 650 ~~~dd~dg~I~~~eF~~~~~~----~~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (900)
T 1qxp_A 650 ARFADDELIIDFDNFVRCLVR----LEILFKIFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEAN 725 (900)
T ss_dssp HHTSCSSSBCCHHHHHHHHHH----HHHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC--------------CCCCCC---
T ss_pred HHhCCCCCeEcHHHHHHHHHH----HHHHHHHHHhhCCCCCceEEecHHHHHHHhhhccccccccccccccccccCCCCC
Confidence 765311111100000000000 02223344444433332210
Q ss_pred ------------ccCCCcccccccccccHHHHHHHhCC-----------CChHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy5584 1342 ------------RRDDETGEVVMRTSLSRAEFASALGM-----------KSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398 (2014)
Q Consensus 1342 ------------~d~d~~G~~~~~g~ls~~Ef~~~Lg~-----------~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l 1398 (2014)
...|. .+|.|+.+||.+.+.. ..+.+.++.++..+|.|++|.|+|+||+.++
T Consensus 726 ~~~~~~~l~~~F~~~D~-----~~G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~ 800 (900)
T 1qxp_A 726 ESEEERQFRKLFVQLAG-----DDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLW 800 (900)
T ss_dssp -----------CCCCTT-----CSSCBCHHHHTTTSCC----CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHH
T ss_pred ChHHHHHHHHHHHHhcC-----CCCccCHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHH
Confidence 00011 1568999999998743 4567899999999999999999999999988
Q ss_pred HHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHH
Q psy5584 1399 VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLM 1478 (2014)
Q Consensus 1399 ~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~ 1478 (2014)
..+ .+++.+|+.+|+|++|.|+.+||+.+++.++. .+++++++. +++.+| |+||.|+|+||+.+
T Consensus 801 ~~~------~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~-----~ls~~~~~~----l~~~~d-d~dg~Is~~EF~~~ 864 (900)
T 1qxp_A 801 NNI------KKWQGIYKRFETDRSGTIGSNELPGAFEAAGF-----HLNQHIYSM----IIRRYS-DETGNMDFDNFISC 864 (900)
T ss_dssp HHH------HHHSSCC----CCSCC-------CCTTGGGTC-----CCCSCCCC-------------CCSCCCHHHHHHH
T ss_pred HHH------HHHHHHHHHhCCCCCCccCHHHHHHHHHhcCC-----CCCHHHHHH----HHHHhc-CCCCeECHHHHHHH
Confidence 765 36889999999999999999999999987654 677776555 677789 99999999999999
Q ss_pred HHhCcc
Q psy5584 1479 MRDYKG 1484 (2014)
Q Consensus 1479 l~~~~~ 1484 (2014)
+...+.
T Consensus 865 ~~~l~~ 870 (900)
T 1qxp_A 865 LVRLDA 870 (900)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987643
No 33
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=99.85 E-value=2e-22 Score=258.31 Aligned_cols=180 Identities=13% Similarity=0.111 Sum_probs=143.7
Q ss_pred ccccccccCHHHHHhhhCCCCChHHHHHHHHhhccCCCCcccHHHHHhhhhhccCCCHHHHHHHHH----hhc-cCCCCc
Q psy5584 47 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIF----DMC-DNDRNG 121 (2014)
Q Consensus 47 ~v~ps~~i~~~EF~~al~~rf~~s~~~~~f~~fD~d~~g~I~f~Efi~~~~~l~~~~~~d~l~~~f----~~~-D~d~~G 121 (2014)
.++++++ +||+.| +| .|++++..|.+. ++.+.|+|+++++..+..++.++-++.+. ..+ |....+
T Consensus 341 ~~~~~is---~EF~~a--yR-~Hslip~~~~~~----~~~~~l~~~ff~~~~~~~~g~~~ll~g~~~q~a~~~~~~~n~~ 410 (553)
T 1q4g_A 341 QYRNRIA---MEFNQL--YH-WHPLMPDSFRVG----PQDYSYEQFLFNTSMLVDYGVEALVDAFSRQPAGRIGGGRNID 410 (553)
T ss_dssp CCCCCCB---HHHHHH--TC-CGGGSCSSEEET----TEEECHHHHTTCSSHHHHHCHHHHHHHHHHSBCBCSSSSSCBC
T ss_pred ccCcchh---HHHHHH--hc-ccccCCcccccC----CCcccHHHHhcCchhhhcccHHHHHHHhhhchhhcccccccCc
Confidence 3678899 999876 78 799999876542 46799999999998876666655555543 223 221111
Q ss_pred cccHHHHHHHHHHH--HHhhcC---CCCC--------C-CCchh---H--HHHHHHhhhhcCCCCcchhhhhhccccccC
Q psy5584 122 VIDKGELAEMLRSL--VEMART---SFPS--------G-GAATT---V--VKIVLRGYYSYGNSLDNIDLYIGGMLESHE 182 (2014)
Q Consensus 122 ~Is~~El~~~L~dL--~niqrg---glp~--------~-~~a~~---i--~~~~l~~~~~~~~~~~~idl~~gg~~E~~~ 182 (2014)
..+.|| +||||| |||+ | .++++ + +++++++|++.|+++||||||||||+|++.
T Consensus 411 --------~~~~dL~alnIqRgRDhGlp~YN~~R~~~gL~~~~tf~dl~~d~~~~~~L~~lY~~~ddiDL~vG~laE~~~ 482 (553)
T 1q4g_A 411 --------HHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSFQELTGEKEMAAELEELYGDIDALEFYPGLLLEKCH 482 (553)
T ss_dssp --------TTTHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHHHHHHHHSSGGGCCHHHHHHHSCBC
T ss_pred --------HHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhcCCHHHHHHHHHHhcChhhccccccccccccC
Confidence 124566 999999 9999 5 66655 2 478999999999999999999999999985
Q ss_pred C---CCchhhhHHHH-HHHHhh---cccccccccCCCCCCCHHHHHHHHh-ccchhhhhccCccccccccccccccc
Q psy5584 183 G---PGPLFTNIILE-QFTRLR---DADRFWFENTENGMFTAAEVEAIRK-ITLWDIIVNATDIGADAIQKNVFFWN 251 (2014)
Q Consensus 183 ~---~gp~~~~i~~~-qf~r~r---~gdrf~~e~~~~~~ft~~ql~~i~~-~~l~~i~c~~~~~~~~~~q~~~f~~~ 251 (2014)
+ +||||.|||++ ||+|+| .||||||+ ++.||++|+.||+| +||++|||+|++ .+|.++|.++
T Consensus 483 ~G~~~Gpt~~~ii~~~~~~~l~~~~~~d~~~~~---~~~ft~~ql~ei~~~~sla~iic~n~~----~~p~~~F~~p 552 (553)
T 1q4g_A 483 PNSIFGESMIEMGAPFSLKGLLGNPICSPEYWK---ASTFGGEVGFNLVKTATLKKLVCLNTK----TCPYVSFHVP 552 (553)
T ss_dssp TTCSSBHHHHHHHHHHHHHHHHTSGGGSTTTCS---GGGGTSHHHHHHHHTCCHHHHHHTTSS----SCCCCCSBCC
T ss_pred CCCCccHHHHHHHHHHHHHHHhhCcCCCccccC---CCCcCHHHHHHHHHhCCHHHHHHHcCC----CCCcccccCC
Confidence 3 99999999998 799997 59998883 58999999999987 699999999997 6999999875
No 34
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=99.85 E-value=7.7e-23 Score=261.03 Aligned_cols=181 Identities=15% Similarity=0.188 Sum_probs=141.2
Q ss_pred ccccccccCHHHHHhhhCCCCChHHHHHHHHhhccCCCCcccHHHHHhhhhhccCCCHHHHHHHHHh----hccCCCCcc
Q psy5584 47 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFD----MCDNDRNGV 122 (2014)
Q Consensus 47 ~v~ps~~i~~~EF~~al~~rf~~s~~~~~f~~fD~d~~g~I~f~Efi~~~~~l~~~~~~d~l~~~f~----~~D~d~~G~ 122 (2014)
.++|+++ +||+.| ++.|++++..|.+. ++.+.++|+++++..+..++.++-++.+.. .+|...+
T Consensus 341 ~~~~~is---~eF~~a---~~~Hslip~~~~~~----~~~~~l~~~ff~p~~~~~~gid~llrgl~~q~a~~~~~~~n-- 408 (587)
T 3nt1_A 341 QYQNRIA---SEFNTL---YHWHPLLPDTFNIE----DQEYSFKQFLYNNSILLEHGLTQFVESFTRQIAGRVAGGRN-- 408 (587)
T ss_dssp CSCCCCB---HHHHHH---TCCGGGSCSSEEET----TEEECHHHHTTCTHHHHHHHHHHHHHHHHHSBCBCSSSSSC--
T ss_pred CcCchHH---HHHHHH---HhccccCCcccccC----CCcccHHHHhcCccccchhhHHHHHHHHHHhhhhccccccc--
Confidence 3478999 999988 36899998776532 468999999999987765555444444422 2332111
Q ss_pred ccHHHHHHHHHHH--HHhhcC---CCCC--------C-CCchhH-----HHHHHHhhhhcCCCCcchhhhhhccccccCC
Q psy5584 123 IDKGELAEMLRSL--VEMART---SFPS--------G-GAATTV-----VKIVLRGYYSYGNSLDNIDLYIGGMLESHEG 183 (2014)
Q Consensus 123 Is~~El~~~L~dL--~niqrg---glp~--------~-~~a~~i-----~~~~l~~~~~~~~~~~~idl~~gg~~E~~~~ 183 (2014)
+ ...+.|| +||||| |||+ | +++++. +++++++|++.|++|||||||||||+|++.+
T Consensus 409 ~-----~~~~~DL~alnIqRGRDhGlp~YN~~R~~cgL~~~~tf~dl~~~~~~~~~L~~lY~~~ddIDL~vGglaE~~~p 483 (587)
T 3nt1_A 409 V-----PIAVQAVAKASIDQSREMKYQSLNEYRKRFSLKPYTSFEELTGEKEMAAELKALYSDIDVMELYPALLVEKPRP 483 (587)
T ss_dssp B-----CGGGHHHHHHHHHHHHHTTCCCHHHHHHHTTCCCCSSHHHHHSSSHHHHHHHHHHSSGGGCCHHHHHHHSCCST
T ss_pred C-----chHHHHHHHHHHHHHHhhCCCcHHHHHHHcCCCCCCCHHHhCCCHHHHHHHHHHhCCHhheeeecccccccCCC
Confidence 1 1234677 999999 9999 5 666552 4678899999999999999999999999853
Q ss_pred ---CCchhhhHHHHH------HHHhhcccccccccCCCCCCCHHH-HHHHHhccchhhhhccCcccccccccccccccCC
Q psy5584 184 ---PGPLFTNIILEQ------FTRLRDADRFWFENTENGMFTAAE-VEAIRKITLWDIIVNATDIGADAIQKNVFFWNAT 253 (2014)
Q Consensus 184 ---~gp~~~~i~~~q------f~r~r~gdrf~~e~~~~~~ft~~q-l~~i~~~~l~~i~c~~~~~~~~~~q~~~f~~~~~ 253 (2014)
+||||+|| ..| |.++|+|||||++ +.||.+| +++||++||++|||+|++. +|.++|..++.
T Consensus 484 G~~vGpTf~ci-~~qf~l~~~~~~~r~gDrfw~~----~~Ft~~qgl~~I~~~sL~~lic~N~~~----~p~~~F~~p~~ 554 (587)
T 3nt1_A 484 DAIFGETMVEL-GAPFSLKGLMGNPICSPQYWKP----STFGGEVGFKIINTASIQSLICNNVKG----CPFTSFNVQDP 554 (587)
T ss_dssp TCSSCHHHHHH-HHHHHHHHHHTSGGGSTTTSSG----GGGTSHHHHHHHHTCCHHHHHHHHSTT----CCCCCSBCC--
T ss_pred CccHHHHHHHH-HHHHHHHHHhcCcccCCcccCc----CccChHHHHHHHHHCCHHHHHHhCCCC----CCcceeECCCc
Confidence 99999999 666 4899999999944 5799999 8999999999999999982 99999998763
No 35
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.84 E-value=2.2e-20 Score=222.37 Aligned_cols=231 Identities=17% Similarity=0.268 Sum_probs=173.5
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHH----HhcC--CCCHHHHHH----HHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVV----LFSR--GHTEDKLRI----IFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~----~l~~--~~~eeel~~----lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
.+...++.+|..+|.|++|.|+.+||..++. .++. ..+++++.. +|..+|.|++|.|+++||..++....
T Consensus 8 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~ 87 (272)
T 2be4_A 8 LDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQE 87 (272)
T ss_dssp CCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHHSCHH
T ss_pred cCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHHhhhh
Confidence 3556789999999999999999999999998 7777 778887765 56899999999999999999842210
Q ss_pred HhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHH
Q psy5584 1280 EMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRA 1359 (2014)
Q Consensus 1280 ~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~ 1359 (2014)
......+..... ....+ .+. .+|..+ |.|++ |.|+.+
T Consensus 88 ----------~~~~~~~~~~~~---------~~~~~----~l~----~~F~~~----------D~d~~------G~i~~~ 124 (272)
T 2be4_A 88 ----------ENFLLIFRREAP---------LDNSV----EFM----KIWRKY----------DADSS------GYISAA 124 (272)
T ss_dssp ----------HHHHHHHHHHSC---------CCCHH----HHH----HHHHHH----------CTTCC------SEEEGG
T ss_pred ----------HHHHHHHhhccC---------cccHH----HHH----HHHHHh----------CCCCC------CccCHH
Confidence 000000000000 00011 112 222222 33444 489999
Q ss_pred HHHHHh-------CCCChHHHHH----HHHHHHccCCCCceeHHHHHHHHHHH------------hcCCcHHHHHHHHhh
Q psy5584 1360 EFASAL-------GMKSDAVFVR----MMFNIVDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDM 1416 (2014)
Q Consensus 1360 Ef~~~L-------g~~~s~~~l~----~lf~~~D~DgdG~Isf~EFl~~l~~~------------~~~~~~e~l~~~F~~ 1416 (2014)
||...+ |..++..++. .+|..+|.|++|.|+++||+..+... ......+.++.+|+.
T Consensus 125 e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~ 204 (272)
T 2be4_A 125 ELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAH 204 (272)
T ss_dssp GHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhhhhhhhccccccHHHHHHHHHH
Confidence 998866 6777777664 49999999999999999998876430 111335679999999
Q ss_pred hcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1417 ~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
+|+|++|.|+.+||+.+++.++...+. .+++++++.+++.+|+.+|.|+||.|+|+||+.+|..+|.
T Consensus 205 ~D~d~~G~Is~~E~~~~l~~~~~~~~~-~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~~~p~ 271 (272)
T 2be4_A 205 YDVSRTGALEGPEVDGFVKDMMELVRP-SISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLGLKHK 271 (272)
T ss_dssp HCTTCCSEEETHHHHHHHHHHHHHHSS-SCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTTCCCC
T ss_pred hCCCCCCeecHHHHHHHHHHHHHHcCC-CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHccCCC
Confidence 999999999999999999988764444 7899999998999999999999999999999999987653
No 36
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.82 E-value=6.3e-21 Score=232.63 Aligned_cols=195 Identities=23% Similarity=0.405 Sum_probs=163.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|+|++|.|+.+||..++..++...++.++..+|..+|.|++|.|++.||..+.....
T Consensus 122 ~~l~~~F~~~D~d~dG~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~G~I~f~ef~~l~~~~~------------- 188 (323)
T 1ij5_A 122 NILRQLFLSSAVSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLA------------- 188 (323)
T ss_dssp HHHHHHHTSSSSTTSSCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHH-------------
T ss_pred HHHHHHHHHHhCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHhhhhHHH-------------
Confidence 4588999999999999999999999999999888999999999999999999999999876532110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHh-CCCChH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL-GMKSDA 1371 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~L-g~~~s~ 1371 (2014)
.+...+...|.|++ |.|+.+||...+ |..++.
T Consensus 189 -----------------------------------------~l~~~F~~~D~d~d------G~Is~~El~~~l~g~~~~~ 221 (323)
T 1ij5_A 189 -----------------------------------------ALVADFRKIDTNSN------GTLSRKEFREHFVRLGFDK 221 (323)
T ss_dssp -----------------------------------------TSCCCHHHHCTTCC------SEECHHHHHHHHHHTTCCC
T ss_pred -----------------------------------------HHHHHHHHHCCCCC------CcCcHHHHHHHHcCCCCCH
Confidence 11111222244444 499999999986 777788
Q ss_pred HHHHH-HHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH-HHHHHhhcCCCCCHH
Q psy5584 1372 VFVRM-MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML-RSLVEMARTTSLTDS 1449 (2014)
Q Consensus 1372 ~~l~~-lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L-~~l~~~~~~~~ls~~ 1449 (2014)
.++.. +|..+|.|++|.|+|.||+.++.... .+..+|+.+|.|++|.|+.+||..++ ..++. .++++
T Consensus 222 ~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~------~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-----~ls~~ 290 (323)
T 1ij5_A 222 KSVQDALFRYADEDESDDVGFSEYVHLGLCLL------VLRILYAFADFDKSGQLSKEEVQKVLEDAHIP-----ESARK 290 (323)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH------HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCC-----GGGCS
T ss_pred HHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH------HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCC-----CCCHH
Confidence 88999 99999999999999999999988764 69999999999999999999999999 75543 56666
Q ss_pred HHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1450 QVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1450 e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++ +.+|..+|.|+||.|+|+||+.+|...
T Consensus 291 e~----~~l~~~~D~d~dG~Is~~EF~~~~~~~ 319 (323)
T 1ij5_A 291 KF----EHQFSVVDVDDSKSLSYQEFVMLVLLM 319 (323)
T ss_dssp TH----HHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred HH----HHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 64 448888999999999999999998764
No 37
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.81 E-value=6e-20 Score=217.48 Aligned_cols=213 Identities=20% Similarity=0.339 Sum_probs=169.2
Q ss_pred HHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHHhC---CCCcH------HHHHHHHHhhcCCCCcceeHHHHH
Q psy5584 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG---MKSDA------VFVRMMFNIVDKDGDGRISFQEFL 1236 (2014)
Q Consensus 1166 ~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~L~---~~~~~------~~l~~lF~~~D~dgdG~Is~~EF~ 1236 (2014)
++++|. .+|.|++ |.|+.+||..+|. ...+. ..++.+|..+|.|++|.|+++||.
T Consensus 18 l~~~F~-~~D~d~~---------------G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~ 81 (263)
T 2f33_A 18 FFEIWL-HFDADGS---------------GYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELA 81 (263)
T ss_dssp HHHHHH-HHCTTCS---------------SSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHH
T ss_pred HHHHHH-HhCCCCC---------------CCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence 445565 4788776 8999999997653 33332 788999999999999999999999
Q ss_pred HHHHHh---------cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHH
Q psy5584 1237 DTVVLF---------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307 (2014)
Q Consensus 1237 ~~l~~l---------~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~ 1307 (2014)
.++... ....+.++++.+|+.+|.|++|.|+.+||..++..+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~-------------------------- 135 (263)
T 2f33_A 82 HVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEK-------------------------- 135 (263)
T ss_dssp HHTTSCTTHHHHHGGGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHH--------------------------
T ss_pred HHHhhhhhHHHHHHHhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhh--------------------------
Confidence 987543 456678899999999999999999999999998663210
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHH----HHHHHHcc
Q psy5584 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVR----MMFNIVDK 1383 (2014)
Q Consensus 1308 ~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~----~lf~~~D~ 1383 (2014)
.|..++..++. .++..+|.
T Consensus 136 ---------------------------------------------------------~g~~~~~~~~~~~~~~~~~~~d~ 158 (263)
T 2f33_A 136 ---------------------------------------------------------ANKTVDDTKLAEYTDLMLKLFDS 158 (263)
T ss_dssp ---------------------------------------------------------HTSCCCHHHHHHHHHHHHHHTCS
T ss_pred ---------------------------------------------------------cCCCCCHHHHHHHHHHHHHhcCC
Confidence 12333444444 49999999
Q ss_pred CCCCceeHHHHHHHHHH-------H-hcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHH
Q psy5584 1384 DGDGRISFQEFLDTVVL-------F-SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI 1455 (2014)
Q Consensus 1384 DgdG~Isf~EFl~~l~~-------~-~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li 1455 (2014)
|++|.|+|+||+.++.. . ......+.++.+|+.+|+|++|.|+.+||+.+++.++...+. .+++++++.
T Consensus 159 ~~dg~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~-~~~~~e~~~-- 235 (263)
T 2f33_A 159 NNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQ-ELDINNIST-- 235 (263)
T ss_dssp SSSSCBCHHHHHHHSCTTTCSHHHHHHTCCCHHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTT-TCCTTTHHH--
T ss_pred CCCCeEcHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCC-CCCHHHHHH--
Confidence 99999999999988743 1 234667889999999999999999999999999988763333 678887766
Q ss_pred HHHHHH-cCCCCCCcccHHHHHHHHHhC
Q psy5584 1456 DGMFQD-AGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1456 ~~if~~-~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+++. +|.|+||.|+|+||+.+|...
T Consensus 236 --~~~~~~D~d~dG~i~~~EF~~~~~~~ 261 (263)
T 2f33_A 236 --YKKNIMALSDGGKLYRTDLALILSAG 261 (263)
T ss_dssp --HHHHHHTTSBTTEECGGGTHHHHCCS
T ss_pred --HHHHhhccCCCCeEcHHHHHHHHhcc
Confidence 4444 599999999999999999764
No 38
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.77 E-value=2.1e-18 Score=203.02 Aligned_cols=209 Identities=11% Similarity=0.112 Sum_probs=151.8
Q ss_pred eeEeEEEEEEEcCCCEEEEEEecCC--CC-cccCCCEEEEEecCC-CCCcccccccCCCCCCCeEEEEEEec---CCccH
Q psy5584 1731 YMALDILETELLPSDVIKIRFYRPP--NF-TYHSGQWVRLACTAF-KNAAYHSFTLTSAPHENFLSCHIKAQ---GPWTW 1803 (2014)
Q Consensus 1731 ~~~~~v~~v~~l~~~v~~l~~~~p~--~~-~~~pGQyv~L~~p~~-~~~e~HPFTIaS~p~~~~l~l~Ir~~---G~~T~ 1803 (2014)
...++|++++.+++++++|+|..|. .+ .++|||||.|.+|.. +...+|||||++.|. +.+++.++.. |..|.
T Consensus 8 ~~~~~V~~~~~~t~~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~-~~~~i~~~~~~~~G~~S~ 86 (252)
T 2gpj_A 8 PRELEVIRSTYITPHMLRITLGGAGLAGFPADQESAYIKLLFPQAGERPLMRTYTIRQQRD-DEIDVDFVLHDTDGPASS 86 (252)
T ss_dssp CEEEEEEEEEEEETTEEEEEEESGGGTTCCSCCTTCEEEEEECCTTSCCEEEEEECCEEET-TEEEEEEECCSSCCHHHH
T ss_pred cEEEEEEEEEEcCCCEEEEEEEcCChhhcCCCCCCCeEEEEcccCCCCCCCCceeeeccCC-CEEEEEEEEeCCCCcHHH
Confidence 4668899999999999999999874 33 489999999999853 456789999999876 7777777765 67888
Q ss_pred HHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEE
Q psy5584 1804 KLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWI 1883 (2014)
Q Consensus 1804 ~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~ 1883 (2014)
.|. .++.+ ..+.|.||+|.+..+. ..+++|||||||||||+++|++++... .++++++.
T Consensus 87 ~l~-~l~~G--------d~l~v~gP~G~f~l~~-~~~~~lliagGtGitPi~s~l~~l~~~-----------~~~~~~~~ 145 (252)
T 2gpj_A 87 WAK-TAQVG--------ELIQIGGPGLKKLINF-EADWFLLAGDMTALPAISVNLAKLPNN-----------AVGYAVIE 145 (252)
T ss_dssp HHH-HCCTT--------CEEEEEEEECCCCCCS-SSSEEEEEEEGGGHHHHHHHHHHSCTT-----------CEEEEEEE
T ss_pred HHh-hCCCC--------CEEEEecCCCCCcCCC-CCceEEEEcchhhHHHHHHHHHhCCCC-----------CcEEEEEE
Confidence 775 44444 4899999999886542 457899999999999999999988321 36788888
Q ss_pred eCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHH
Q psy5584 1884 CPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFL 1963 (2014)
Q Consensus 1884 ~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il 1963 (2014)
+|+.+++..+ . ....++++.+.+.... . .|+ . +
T Consensus 146 ~~~~~d~~~l-------~---~~~~~~v~~~~~~~~~--~------------------------------~g~----~-~ 178 (252)
T 2gpj_A 146 VLSEADIQPL-------V---HPEHVELHWVINPEAD--P------------------------------EGR----P-L 178 (252)
T ss_dssp ESSGGGCCCC-------C---CCTEEEEEEEECSSCC--T------------------------------TCH----H-H
T ss_pred ECCHHHhhcc-------c---CCCCcEEEEEeCCCCC--c------------------------------ccH----H-H
Confidence 9998775422 1 1234666554433210 0 011 1 1
Q ss_pred HHHHHhC--CCCCeEEEEEeCChhhHHHHHHHHH-hhhcCCCCCeEEEEEecC
Q psy5584 1964 KFVQKKH--SYVSKIGVFSCGPRPLTKSIMSACE-EVNKGRKLPYFIHHFENF 2013 (2014)
Q Consensus 1964 ~~l~~~~--~~~~~v~V~vCGP~~m~~~vr~a~~-~~~~~~g~~~~~~h~E~F 2013 (2014)
..+.... +. ....||+|||++|++++++.+. +. |++.-++|+|.|
T Consensus 179 ~~~l~~~~~~~-~~~~vy~CGP~~m~~av~~~l~~~~----G~~~~~i~~e~f 226 (252)
T 2gpj_A 179 VERIAQLPWLA-GEPAVWIACEFNSMRALRRHFKQAH----ALPKSHFYTSSY 226 (252)
T ss_dssp HHHHTTSCCCS-SCEEEEEEEEHHHHHHHHHHHHHHC----CCCGGGEEEEEE
T ss_pred HHHHHhccCCC-CCcEEEEEcCHHHHHHHHHHHHHhc----CCCHHHeEEEEE
Confidence 2222221 12 3567999999999999999998 55 778888999988
No 39
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.77 E-value=7.6e-19 Score=227.59 Aligned_cols=245 Identities=17% Similarity=0.241 Sum_probs=175.8
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHHHHhhhcCCCCCCcCCCCc
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFREAYALTFGLKPGEKRRRDD 1186 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~~F~~~~d~d~~~~~~~~~ 1186 (2014)
.||.+.++.+.+..|.++.+.+..+.|..+|+++++||++||..+|.+| +|+|+|.+.+.. .......+..
T Consensus 225 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~----~~~~~~~~~~ 300 (484)
T 3nyv_A 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTK----EQISVDVPSL 300 (484)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC---------CCCBC
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhccccc----ccccccccch
Confidence 5899999999999999999999999999999999999999999999998 489988764431 0000000000
Q ss_pred cccccccccCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcc
Q psy5584 1187 ETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266 (2014)
Q Consensus 1187 ~~~~~~l~~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~I 1266 (2014)
..+... ..++.. ...+++ .-+..+...+......++++.+|+.+|.|+||.|
T Consensus 301 ~~~~~~------~~~~~~-------~~kl~q---------------a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I 352 (484)
T 3nyv_A 301 DNAILN------IRQFQG-------TQKLAQ---------------AALLYMGSKLTSQDETKELTAIFHKMDKNGDGQL 352 (484)
T ss_dssp HHHHHH------HHHHHH-------HHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEE
T ss_pred HHHHHH------HHHHhh-------hhHHHH---------------HHHHHHHhccCcHHHHHHHHHHHHHhCcCCCceE
Confidence 000000 001100 000000 0000001111111223578899999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCC
Q psy5584 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1346 (2014)
Q Consensus 1267 s~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~ 1346 (2014)
+.+||..++......
T Consensus 353 ~~~El~~~l~~~~~~----------------------------------------------------------------- 367 (484)
T 3nyv_A 353 DRAELIEGYKELMRM----------------------------------------------------------------- 367 (484)
T ss_dssp EHHHHHHHHHHHHC------------------------------------------------------------------
T ss_pred eHHHHHHHHHHHhhh-----------------------------------------------------------------
Confidence 999998877553210
Q ss_pred cccccccccccHHHHHHHhCCCCh-------HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcC
Q psy5584 1347 TGEVVMRTSLSRAEFASALGMKSD-------AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1347 ~G~~~~~g~ls~~Ef~~~Lg~~~s-------~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~ 1419 (2014)
+|..++ ..+++.+|+.+|.|++|.|+|+||+.++........+++++.+|+.+|+
T Consensus 368 ------------------~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~ 429 (484)
T 3nyv_A 368 ------------------KGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLLSRERLERAFRMFDS 429 (484)
T ss_dssp ---------------------CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ------------------cccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccCcHHHHHHHHHHHCC
Confidence 122222 5679999999999999999999999998876555667889999999999
Q ss_pred CCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1420 DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
|+||.|+.+||+.++.. . .++++++++ +|+.+|.|+||.|+|+||+.+|.+.
T Consensus 430 d~dG~I~~~El~~~l~~--~-----~~~~~~~~~----~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 430 DNSGKISSTELATIFGV--S-----DVDSETWKS----VLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp TCCSEEEHHHHHHHHHH--T-----TCCHHHHHH----HHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHh--c-----CCCHHHHHH----HHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 99999999999999875 2 678887655 8889999999999999999999875
No 40
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.77 E-value=1e-18 Score=227.48 Aligned_cols=250 Identities=19% Similarity=0.257 Sum_probs=184.6
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHHHHhhhcCCCCCCcCCCCc
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFREAYALTFGLKPGEKRRRDD 1186 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~~F~~~~d~d~~~~~~~~~ 1186 (2014)
.||.+.+..+++..|..+.+.+....|..+|.++++++++||..+|.+| +|+|+|.+.... . .
T Consensus 245 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~----~-~------- 312 (504)
T 3q5i_A 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYAN----N-I------- 312 (504)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCC----C-C-------
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhchh----c-c-------
Confidence 5899999999999999999999999999999999999999999999988 488988753220 0 0
Q ss_pred cccccccccCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcc
Q psy5584 1187 ETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266 (2014)
Q Consensus 1187 ~~~~~~l~~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~I 1266 (2014)
.......+...+ .. +.. -.+...+....+......+......++++.+|+.+|.|+||.|
T Consensus 313 --------~~~~~~~~~~~~---------~~-~~~--~~~~~kl~~a~l~~i~~~~~~~~~~~~l~~~F~~~D~d~dG~I 372 (504)
T 3q5i_A 313 --------NKSDQKTLCGAL---------SN-MRK--FEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDKNGDGQL 372 (504)
T ss_dssp --------CGGGHHHHHHHH---------HH-HHH--CCCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCSSEE
T ss_pred --------cccchhhHHHHH---------HH-HHH--HHHHHHHHHHHHHHhhccCCcHHHHHHHHHHHHeeCCCCCCeE
Confidence 000111111100 00 111 1222333333333333333222334678899999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCC
Q psy5584 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1346 (2014)
Q Consensus 1267 s~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~ 1346 (2014)
+.+||..++..+.... ..
T Consensus 373 ~~~El~~~l~~~~~~~--------------------------------------------------------------~~ 390 (504)
T 3q5i_A 373 DKKELIEGYNVLRNFK--------------------------------------------------------------NE 390 (504)
T ss_dssp CHHHHHHHHHHHHHHC----------------------------------------------------------------
T ss_pred cHHHHHHHHHHhhhcc--------------------------------------------------------------cc
Confidence 9999999887643100 00
Q ss_pred cccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeee
Q psy5584 1347 TGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1426 (2014)
Q Consensus 1347 ~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is 1426 (2014)
. -|...+..+++.+|..+|.|++|.|+|+||+.++........++.++.+|+.+|+|+||.|+
T Consensus 391 ~-----------------~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is 453 (504)
T 3q5i_A 391 L-----------------GELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKIT 453 (504)
T ss_dssp C-----------------CSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCCSEEC
T ss_pred c-----------------ccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccCHHHHHHHHHHhcCCCCCcCc
Confidence 0 14566788899999999999999999999999887665556778999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1427 KGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1427 ~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.+||+.++.. . .++++++++ +|+.+|.|+||.|+|+||+.+|.+..
T Consensus 454 ~~El~~~l~~--~-----~~~~~~~~~----~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 454 KEELANLFGL--T-----SISEKTWND----VLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp HHHHHHHTTC--S-----CCCHHHHHH----HHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred HHHHHHHHhh--C-----CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 9999999864 1 678887655 88899999999999999999998753
No 41
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.76 E-value=3.2e-19 Score=231.21 Aligned_cols=257 Identities=14% Similarity=0.241 Sum_probs=167.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHHHHhhhcCCCCCCcCCCCc
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFREAYALTFGLKPGEKRRRDD 1186 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~~F~~~~d~d~~~~~~~~~ 1186 (2014)
.||.+.+..+.+.+|..+.+.+..+.|..+|++++++|++||..+|.+| +|+|+|.+.+.. ...
T Consensus 220 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~----~~~------- 288 (486)
T 3mwu_A 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS----ETP------- 288 (486)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCC----CCC-------
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCcc----cCc-------
Confidence 5899999999999999999999999999999999999999999999988 489988754221 000
Q ss_pred cccccccccCc-CHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCc
Q psy5584 1187 ETGEVVMRTSL-SRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1265 (2014)
Q Consensus 1187 ~~~~~~l~~~L-s~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~ 1265 (2014)
.+ +...+...+ ..+ ..+.. ...+....+......+......++++.+|+.+|.|+||.
T Consensus 289 ---------~~~~~~~~~~~~---------~~~-~~~~~--~~~~~~~~l~~ia~~l~~~~~~~~l~~~F~~~D~d~dG~ 347 (486)
T 3mwu_A 289 ---------TISDLPSLESAM---------TNI-RQFQA--EKKLAQAALLYMASKLTTLDETKQLTEIFRKLDTNNDGM 347 (486)
T ss_dssp ---------CGGGHHHHHHHH---------HHH-HHHHH--SCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSS
T ss_pred ---------cccccccHHHHH---------HHH-HHHHH--HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCCce
Confidence 00 001111100 000 00100 011111112222222222233467899999999999999
Q ss_pred ccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCC
Q psy5584 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDD 1345 (2014)
Q Consensus 1266 Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d 1345 (2014)
|+.+||..++.......+. ..
T Consensus 348 I~~~El~~~l~~~~~~~g~---------------------------------------------------~~-------- 368 (486)
T 3mwu_A 348 LDRDELVRGYHEFMRLKGV---------------------------------------------------DS-------- 368 (486)
T ss_dssp BCHHHHHHHHHHHHHHHTC---------------------------------------------------CG--------
T ss_pred eeHHHHHHHHHHhhhhhcc---------------------------------------------------cc--------
Confidence 9999998887653211000 00
Q ss_pred CcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCee
Q psy5584 1346 ETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1425 (2014)
Q Consensus 1346 ~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~I 1425 (2014)
+ .+.. -.......+++.+|..+|.|++|.|+|+||+..+........+++++.+|+.+|+|+||.|
T Consensus 369 -~------------~~~~-~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I 434 (486)
T 3mwu_A 369 -N------------SLIQ-NEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKI 434 (486)
T ss_dssp -G------------GHHH-HTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTTTCCHHHHHHHHHHHCSSCSSSB
T ss_pred -h------------hccc-ccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhccchHHHHHHHHHHhCCCCCCcC
Confidence 0 0000 0112346789999999999999999999999988766666778899999999999999999
Q ss_pred eHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1426 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1426 s~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+.+||+.++..++. .++++++++ +|+.+|.|+||.|+|+||+.+|.+.
T Consensus 435 s~~El~~~l~~~g~-----~~~~~~~~~----~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 435 STKELFKLFSQADS-----SIQMEELES----IIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp CSSCC-----------------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCC-----CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 99999999998776 677776544 8889999999999999999999764
No 42
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.75 E-value=1.1e-18 Score=226.67 Aligned_cols=251 Identities=16% Similarity=0.190 Sum_probs=178.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHHHHhhhcCCCCCCcCCCCc
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFREAYALTFGLKPGEKRRRDD 1186 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~~F~~~~d~d~~~~~~~~~ 1186 (2014)
.||.+.+..+++..|..+.+.+..+.|..+|++++++|++||..+|.+| +|+|+|........... ...+..
T Consensus 235 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~---~~~~~~ 311 (494)
T 3lij_A 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESG---IELPSL 311 (494)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC------CCCC
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCccccccc---cccccc
Confidence 5899999999999999999999999999999999999999999999988 48897764321110000 000001
Q ss_pred cccccccccCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcc
Q psy5584 1187 ETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266 (2014)
Q Consensus 1187 ~~~~~~l~~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~I 1266 (2014)
..+... +. ... ....+....+......+......++++.+|+.+|.|+||.|
T Consensus 312 ~~~~~~---------~~---~~~----------------~~~~l~qa~l~~ia~~~~~~~~~~~l~~~F~~~D~d~dG~I 363 (494)
T 3lij_A 312 ANAIEN---------MR---KFQ----------------NSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQL 363 (494)
T ss_dssp SSHHHH---------HH---TTT----------------TCCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHCTTCSSEE
T ss_pred HHHHHH---------HH---HHH----------------HhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCcCCCCeE
Confidence 111110 10 000 11111111111111112222234578899999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCC
Q psy5584 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1346 (2014)
Q Consensus 1267 s~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~ 1346 (2014)
+.+||..++..+.... .
T Consensus 364 ~~~El~~~l~~~~~~~---------------------------------------------------------------~ 380 (494)
T 3lij_A 364 DRQELIDGYSKLSGEE---------------------------------------------------------------V 380 (494)
T ss_dssp CHHHHHHTTHHHHSSC---------------------------------------------------------------C
T ss_pred cHHHHHHHHHHhcccc---------------------------------------------------------------c
Confidence 9999998886643100 0
Q ss_pred cccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeee
Q psy5584 1347 TGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1426 (2014)
Q Consensus 1347 ~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is 1426 (2014)
. ..+...+..+++.+|+.+|.|++|.|+|+||+.++........+++++.+|+.+|+|+||.|+
T Consensus 381 ~----------------~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is 444 (494)
T 3lij_A 381 A----------------VFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLSKDKLESAFQKFDQDGNGKIS 444 (494)
T ss_dssp C----------------CC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTCHHHHHHHHHHHCTTCSSEEC
T ss_pred c----------------cccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhccccHHHHHHHHHHHCCCCCCcCC
Confidence 0 023445677899999999999999999999999987665556778899999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1427 KGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1427 ~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.+||+.++.. . .++++++++ +|+.+|.|+||.|+|+||+.+|.+..
T Consensus 445 ~~El~~~l~~--~-----~~~~~~~~~----~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 445 VDELASVFGL--D-----HLESKTWKE----MISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp HHHHHHHC-C--C-----SCCCHHHHH----HHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHh--c-----CCCHHHHHH----HHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 9999999864 1 677777555 88899999999999999999998643
No 43
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.73 E-value=2.6e-17 Score=187.79 Aligned_cols=182 Identities=20% Similarity=0.299 Sum_probs=151.1
Q ss_pred hhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhh
Q psy5584 1221 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1299 (2014)
Q Consensus 1221 ~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~ 1299 (2014)
.++.+++|.|+.+|+..++..+. .++++++.+|+.+|.+ ++|.|+++||..++..+.
T Consensus 7 ~mg~~~~g~l~~~el~~~~~~~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~-------------------- 64 (207)
T 2d8n_A 7 GMGNSKSGALSKEILEELQLNTK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFF-------------------- 64 (207)
T ss_dssp -CTTCCTTCCCHHHHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTC--------------------
T ss_pred hhccccCCCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhc--------------------
Confidence 47899999999999999998865 6899999999999999 799999999999886521
Q ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHH
Q psy5584 1300 FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFN 1379 (2014)
Q Consensus 1300 ~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~ 1379 (2014)
....+..++..+|.
T Consensus 65 ------------------------------------------------------------------~~~~~~~~~~~~f~ 78 (207)
T 2d8n_A 65 ------------------------------------------------------------------PDTDPKAYAQHVFR 78 (207)
T ss_dssp ------------------------------------------------------------------TTSCCHHHHHHHHH
T ss_pred ------------------------------------------------------------------cCCCcHHHHHHHHH
Confidence 00134567899999
Q ss_pred HHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhc----CCCCCHH--HHHH
Q psy5584 1380 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR----TTSLTDS--QVTE 1453 (2014)
Q Consensus 1380 ~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~----~~~ls~~--e~~~ 1453 (2014)
.+|.|++|.|+++||+.++........+++++.+|+.+|.|++|.|+.+||..++..+....+ . .++++ ..++
T Consensus 79 ~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~-~l~~~~~~~~~ 157 (207)
T 2d8n_A 79 SFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVK-LLPDDENTPEK 157 (207)
T ss_dssp HHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHH-TSCTTTSSHHH
T ss_pred HhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCC-CcccccccHHH
Confidence 999999999999999999998877777788999999999999999999999999998622111 1 45542 2334
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhccc
Q psy5584 1454 LIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGL 1491 (2014)
Q Consensus 1454 li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~ 1491 (2014)
.++.+|+.+|.|+||.|+|+||+.++...+..+..+..
T Consensus 158 ~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 195 (207)
T 2d8n_A 158 RAEKIWKYFGKNDDDKLTEKEFIEGTLANKEILRLIQF 195 (207)
T ss_dssp HHHHHHHHTTCCTTCCEEHHHHHHHHHHCHHHHHHHSC
T ss_pred HHHHHHHHcCCCCCCcCcHHHHHHHHHhChHHHHHHhh
Confidence 57779999999999999999999999998877666553
No 44
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.71 E-value=6.9e-18 Score=226.30 Aligned_cols=230 Identities=18% Similarity=0.234 Sum_probs=179.4
Q ss_pred CeeEEEeCCCCCeEEEEEcccCCCCCCCCeEEEEEccCcceEEeecChh--HHHHHHHHHhhcccccccccccccccHHH
Q psy5584 1070 EKLRTVNFKNCDTVTIEESQPERGKKKHPMVLIRVHRDHDLVLEFDSLA--ARKKFMNKMEGFLNAMKKHLIIVQSPREL 1147 (2014)
Q Consensus 1070 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlPF~~~~--~~~~~~~Il~~~~~f~~~~~~~vs~~~kd 1147 (2014)
.+.++..|.|.|+|+.++ +||||.|+|+|.+.+. +.++.++|++.......+.-+.++....+
T Consensus 458 ~~~~s~~f~~~Rev~~~~---------------~L~pG~Y~IVPstf~p~~e~~F~Lrv~s~~~~~~~el~~~~~~~~~~ 522 (714)
T 3bow_A 458 ARERSDTFINLREVLNRF---------------KLPPGEYVLVPSTFEPHKNGDFCIRVFSEKKADYQTVDDEIEANIEE 522 (714)
T ss_dssp CSEECSCEESSSEEEEEE---------------EECSEEEEEEEEESSTTCCEEEEEEEEEEESSCC--CCCSCEECCCC
T ss_pred CccccCCcccccceEEEE---------------EeCCCCeEEEEecCCCCCccceeEEEeccCCcceeeccccccccccc
Confidence 345677899999999988 9999999999988776 45666666665433222222222211110
Q ss_pred HHHhhcCHHH-HHHHHHHHHHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHHh-----------CCCCcHHHH
Q psy5584 1148 MLAKAETRER-RQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL-----------GMKSDAVFV 1215 (2014)
Q Consensus 1148 li~~~L~~~~-~~r~L~h~~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~L-----------~~~~~~~~l 1215 (2014)
+.++.++ .++ ++++|.. +| +++ +.|+.+||+.+| +...+.+.+
T Consensus 523 ---~~ls~~e~~~~-----l~~~F~~-~D-d~d---------------G~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~ 577 (714)
T 3bow_A 523 ---IEANEEDIGDG-----FRRLFAQ-LA-GED---------------AEISAFELQTILRRVLAKREDIKSDGFSIETC 577 (714)
T ss_dssp ---CCCSGGGCCHH-----HHHHHHH-HH-GGG---------------TSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHH
T ss_pred ---CCCChhhHHHH-----HHHHHHH-Hc-CCC---------------CcCCHHHHHHHHHHHhhhcccccCCCCCHHHH
Confidence 2245555 333 4455553 55 544 899999999754 456789999
Q ss_pred HHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q psy5584 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTEL 1295 (2014)
Q Consensus 1216 ~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~ 1295 (2014)
+.+|+.+|.|++|.|+++||..++..+ ++++.+|+.+|.|++|.|+.+||..++..
T Consensus 578 ~~l~~~~D~d~~G~I~f~EF~~l~~~~------~~l~~~F~~~D~d~dG~Is~~El~~~L~~------------------ 633 (714)
T 3bow_A 578 KIMVDMLDEDGSGKLGLKEFYILWTKI------QKYQKIYREIDVDRSGTMNSYEMRKALEE------------------ 633 (714)
T ss_dssp HHHHHHHCCSSCSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSSEEHHHHHHHHHH------------------
T ss_pred HHHHHHhCCCCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeECHHHHHHHHHH------------------
Confidence 999999999999999999999999865 78999999999999999999999998855
Q ss_pred HHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHH
Q psy5584 1296 IDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVR 1375 (2014)
Q Consensus 1296 i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~ 1375 (2014)
+|..++.++++
T Consensus 634 ---------------------------------------------------------------------~G~~ls~~~~~ 644 (714)
T 3bow_A 634 ---------------------------------------------------------------------AGFKLPCQLHQ 644 (714)
T ss_dssp ---------------------------------------------------------------------TTEECCHHHHH
T ss_pred ---------------------------------------------------------------------cCCCCCHHHHH
Confidence 23445677899
Q ss_pred HHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH
Q psy5584 1376 MMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439 (2014)
Q Consensus 1376 ~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~ 1439 (2014)
.++..+| |++|.|+|+||+.++... +.+..+|+.+|+|++|.|+.+|++.++..+..
T Consensus 645 ~l~~~~D-d~dG~Isf~EF~~~l~~~------~~l~~~F~~~D~d~dG~Is~~el~~l~~~~~~ 701 (714)
T 3bow_A 645 VIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSFSVLG 701 (714)
T ss_dssp HHHHHHS-CTTCEECHHHHHHHHHHH------HHHHHHHSSSCSSCCSEEEEEHHHHHHHHHHC
T ss_pred HHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCcEEHHHHHHHHHHHHH
Confidence 9999999 999999999999998765 57999999999999999999999998887654
No 45
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.71 E-value=1.4e-16 Score=179.62 Aligned_cols=162 Identities=19% Similarity=0.246 Sum_probs=134.1
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
...++++|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++...
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------------- 92 (191)
T 1y1x_A 26 NQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------------- 92 (191)
T ss_dssp TSCHHHHHHHHCTTCSSSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-------------
T ss_pred HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH-------------
Confidence 3568899999999999999999999999767778899999999999999999999999999876431
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
T Consensus 93 -------------------------------------------------------------------------------- 92 (191)
T 1y1x_A 93 -------------------------------------------------------------------------------- 92 (191)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1451 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~ 1451 (2014)
..+..+|+.+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++....
T Consensus 93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~------------- 159 (191)
T 1y1x_A 93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFVC------------- 159 (191)
T ss_dssp HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH-------------
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHH-------------
Confidence 1356778888888888888888888887766667778888888888888888888888888876431
Q ss_pred HHHHHHHHHHcCCCCCCc--ccHHHHHHHHHh
Q psy5584 1452 TELIDGMFQDAGLDSKDF--LTYQDFKLMMRD 1481 (2014)
Q Consensus 1452 ~~li~~if~~~D~d~dG~--Is~eEF~~~l~~ 1481 (2014)
.+..+|+.+|.|++|. ++|+||+.++..
T Consensus 160 --~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 160 --RVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp --HHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred --HHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 2445788888888888 678888887753
No 46
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.71 E-value=4.7e-17 Score=175.47 Aligned_cols=108 Identities=26% Similarity=0.513 Sum_probs=95.4
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC-CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..++..+|.+++|.|++.||+..+...... ..+++++.+|+.+|+|++|+|+.+||+.++..++.
T Consensus 39 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~---- 114 (148)
T 2lmt_A 39 LGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGE---- 114 (148)
T ss_dssp HTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTC----
T ss_pred cCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCc----
Confidence 4566778889999999999999999999999988765443 56788999999999999999999999999998876
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++++++ +|+.+|.|+||.|+|+||+++|.+
T Consensus 115 -~~~~~e~~~----l~~~~D~d~dG~I~~~EF~~~m~~ 147 (148)
T 2lmt_A 115 -KVTDEEIDE----MIREADFDGDGMINYEEFVWMISQ 147 (148)
T ss_dssp -CCCHHHHHH----HHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred -cccHHHHHH----HHHHhCCCCCCeEeHHHHHHHHhc
Confidence 889988666 788899999999999999999864
No 47
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.71 E-value=1.8e-16 Score=175.32 Aligned_cols=163 Identities=20% Similarity=0.289 Sum_probs=138.4
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhc-CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~-~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~ 1289 (2014)
+...++++|..+|+|++|.|+.+||..++..++ ...++++++.+|+.+|.|++|.|+++||..++...
T Consensus 5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~----------- 73 (172)
T 2znd_A 5 DQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI----------- 73 (172)
T ss_dssp -CHHHHHHHHHHCTTCSSCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH-----------
T ss_pred chhHHHHHHHHhCCCCCCcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH-----------
Confidence 346789999999999999999999999998877 67889999999999999999999999999876431
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCC
Q psy5584 1290 SQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369 (2014)
Q Consensus 1290 ~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~ 1369 (2014)
T Consensus 74 -------------------------------------------------------------------------------- 73 (172)
T 2znd_A 74 -------------------------------------------------------------------------------- 73 (172)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS 1449 (2014)
Q Consensus 1370 s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~ 1449 (2014)
..+..+|..+|.|++|.|+.+||..++..+....+++.+..+|+.+|.|++|.|+.+||..++...
T Consensus 74 --~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~------------ 139 (172)
T 2znd_A 74 --TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL------------ 139 (172)
T ss_dssp --HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH------------
T ss_pred --HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH------------
Confidence 236678888999999999999999988887666778889999999999999999999999888743
Q ss_pred HHHHHHHHHHHHcCCCCCCccc--HHHHHHHHHh
Q psy5584 1450 QVTELIDGMFQDAGLDSKDFLT--YQDFKLMMRD 1481 (2014)
Q Consensus 1450 e~~~li~~if~~~D~d~dG~Is--~eEF~~~l~~ 1481 (2014)
+.+..+|+.+|.|+||.|+ ++||+.++..
T Consensus 140 ---~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~ 170 (172)
T 2znd_A 140 ---QRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS 170 (172)
T ss_dssp ---HHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred ---HHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence 1255688889999999985 7888887754
No 48
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.70 E-value=2e-16 Score=182.60 Aligned_cols=170 Identities=12% Similarity=0.124 Sum_probs=145.6
Q ss_pred cccCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHH
Q psy5584 1193 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272 (2014)
Q Consensus 1193 l~~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~ 1272 (2014)
+...++.+|+.+ ++++|..+|+|++|.|+.+||..++..++...++++++.+|+.+|.|++|.|+++||.
T Consensus 41 ~~~~l~~~e~~~----------l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~I~~~EF~ 110 (220)
T 3sjs_A 41 LLNTIPLDQYTR----------IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFM 110 (220)
T ss_dssp GGGGCCHHHHHH----------HHHHHHHHCTTCCSSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSSCBCHHHHH
T ss_pred HHhcCCHHHHHH----------HHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCCHHHHH
Confidence 345778888754 7889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccc
Q psy5584 1273 EMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVM 1352 (2014)
Q Consensus 1273 ~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~ 1352 (2014)
.++...
T Consensus 111 ~~~~~~-------------------------------------------------------------------------- 116 (220)
T 3sjs_A 111 AMYKFM-------------------------------------------------------------------------- 116 (220)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHH--------------------------------------------------------------------------
Confidence 876431
Q ss_pred cccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHH
Q psy5584 1353 RTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432 (2014)
Q Consensus 1353 ~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~ 1432 (2014)
..+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+| |+||.|+.+||..
T Consensus 117 -------------------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~eF~~ 176 (220)
T 3sjs_A 117 -------------------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLNCWIA 176 (220)
T ss_dssp -------------------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHHHHHH
T ss_pred -------------------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHH
Confidence 22667888999999999999999999988877788889999999999 9999999999999
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHHHHHHc-CCCCCC------cccHHHHHHHHHh
Q psy5584 1433 MLRSLVEMARTTSLTDSQVTELIDGMFQDA-GLDSKD------FLTYQDFKLMMRD 1481 (2014)
Q Consensus 1433 ~L~~l~~~~~~~~ls~~e~~~li~~if~~~-D~d~dG------~Is~eEF~~~l~~ 1481 (2014)
++..+.. +..+|+.+ |.+++| .|+|+||+.++..
T Consensus 177 ~~~~l~~---------------~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~ 217 (220)
T 3sjs_A 177 ICAFAAQ---------------TRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS 217 (220)
T ss_dssp HHHHHHH---------------HHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHH---------------HHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence 8875432 44578888 999999 8899999988865
No 49
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.70 E-value=1.5e-16 Score=181.42 Aligned_cols=178 Identities=19% Similarity=0.320 Sum_probs=138.7
Q ss_pred CCCCcceeHHHHHHHHHHhcCCCCH---HHHHHHHHhccCC--CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHh
Q psy5584 1224 KDGDGRISFQEFLDTVVLFSRGHTE---DKLRIIFDMCDND--RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298 (2014)
Q Consensus 1224 ~dgdG~Is~~EF~~~l~~l~~~~~e---eel~~lF~~~D~D--~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~ 1298 (2014)
+|++|.|+.+|+..+..... .+. ++++.+|..+|.| ++|.|+.+||..++...
T Consensus 11 ~~~~g~l~~~el~~l~~~~~--~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~~-------------------- 68 (207)
T 2ehb_A 11 KNAMRPPGYEDPELLASVTP--FTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFRN-------------------- 68 (207)
T ss_dssp ----------CHHHHHHHSS--CCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHSC--------------------
T ss_pred hccccccCHHHHHHHHHhCC--CCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhcc--------------------
Confidence 57889999999998877543 333 3467889999999 99999999999887420
Q ss_pred hhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHH
Q psy5584 1299 MFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMF 1378 (2014)
Q Consensus 1299 ~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf 1378 (2014)
.......++++|
T Consensus 69 --------------------------------------------------------------------~~~~~~~~~~~f 80 (207)
T 2ehb_A 69 --------------------------------------------------------------------RNRRNLFADRIF 80 (207)
T ss_dssp --------------------------------------------------------------------TTCCCHHHHHHH
T ss_pred --------------------------------------------------------------------ccccHHHHHHHH
Confidence 011223578899
Q ss_pred HHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHH
Q psy5584 1379 NIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1457 (2014)
Q Consensus 1379 ~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~ 1457 (2014)
..+|.|++|.|+++||+.++..... ....++++.+|+.+|.|++|.|+.+||..+++.+....+. .++++++++++..
T Consensus 81 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~-~~~~~~~~~~~~~ 159 (207)
T 2ehb_A 81 DVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESEL-VLSEDMIEVMVDK 159 (207)
T ss_dssp HHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTC-CCCHHHHHHHHHH
T ss_pred HHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHccc-ccCHHHHHHHHHH
Confidence 9999999999999999999877653 3557789999999999999999999999999765333344 8999999999999
Q ss_pred HHHHcCCCCCCcccHHHHHHHHHhCcccchhcccc
Q psy5584 1458 MFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGLD 1492 (2014)
Q Consensus 1458 if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~~ 1492 (2014)
+|+.+|.|+||.|+|+||+.++..++..+..+++.
T Consensus 160 ~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~ 194 (207)
T 2ehb_A 160 AFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTLP 194 (207)
T ss_dssp HHHHHCTTCSSEECHHHHHHHHHHCGGGGGGGCCT
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhcch
Confidence 99999999999999999999999999888877663
No 50
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.69 E-value=9.4e-17 Score=194.32 Aligned_cols=108 Identities=36% Similarity=0.577 Sum_probs=92.8
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..+++.+|+.+|.|++|.|+|+||+.++..... ...+++++.+|+.+|+|++|+|+.+||+.+|..++.
T Consensus 331 LG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe---- 406 (440)
T 3u0k_A 331 LGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE---- 406 (440)
T ss_dssp TTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC----
T ss_pred cCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC----
Confidence 567788889999999999999999999999998865433 345678999999999999999999999999998876
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++++++ +|+++|.|+||.|+|+||+++|..
T Consensus 407 -~LSdeEIde----Lfke~D~DgDGkIsyeEFvkmMtS 439 (440)
T 3u0k_A 407 -KLTDEEVDE----MIREADIDGDGQVNYEEFVQMMTA 439 (440)
T ss_dssp -CCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred -CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHhCC
Confidence 899988665 788899999999999999999853
No 51
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.69 E-value=8.1e-17 Score=172.45 Aligned_cols=136 Identities=29% Similarity=0.517 Sum_probs=117.7
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|..+|.|++|.|+.+||..+++.
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~--------------------------------------------------- 34 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRA--------------------------------------------------- 34 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH---------------------------------------------------
Confidence 56888999999999999999999988754
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcH
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTE 1407 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~ 1407 (2014)
+|..++..++..++..+|.|++|.|+|+||+.++..... ....
T Consensus 35 ------------------------------------~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 78 (143)
T 2obh_A 35 ------------------------------------LGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTK 78 (143)
T ss_dssp ------------------------------------TTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------cCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHH
Confidence 456677888999999999999999999999998765432 2345
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
+.++.+|+.+|+|++|+|+.+||+.+++.++. .++++++++ +|+.+|.|+||.|+|+||+.+|.
T Consensus 79 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-----~~~~~~~~~----~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 79 EEILKAFKLFDDDETGKISFKNLKRVAKELGE-----NLTDEELQE----MIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC-----CCCHHHHHH----HHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHc
Confidence 67999999999999999999999999987765 788888666 77889999999999999999875
No 52
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=99.68 E-value=6.2e-17 Score=200.39 Aligned_cols=185 Identities=13% Similarity=0.195 Sum_probs=135.4
Q ss_pred cccCCCEEEEEecCCCCCcccccccCCCCC--CCeEEEEEEec----------CCccHHHHhhhccCCCCCCCCCcEEEE
Q psy5584 1758 TYHSGQWVRLACTAFKNAAYHSFTLTSAPH--ENFLSCHIKAQ----------GPWTWKLRNYFDPCNFNASEDQPKIRL 1825 (2014)
Q Consensus 1758 ~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~--~~~l~l~Ir~~----------G~~T~~L~~~~~~~~~~~~~~~~~v~I 1825 (2014)
.+.||||+.+..| .+.|||||+|+|. ++.++|+||.. |..|..|.+.+..+ .+|.|
T Consensus 145 ~~~~Gq~v~l~~~----~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~~~~~~G~~S~~L~~~l~~G--------d~v~v 212 (374)
T 1ddg_A 145 QLDAEALINLLRP----LTPRLYSIASSQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEE--------GEVRV 212 (374)
T ss_dssp CCCHHHHHHHSCB----CCCEEEEBCCCTTTSCSEEEEEEEECEEEETTEEEECHHHHHHHHSCCSS--------CEEEE
T ss_pred CCCHHHHHhhccC----CCCccceecCCCCCCCCEEEEEEEEEEeecCCCCCCCCchHHHHhcCCCC--------CEEEE
Confidence 7899999999765 4899999999995 58999999986 78899998855544 38999
Q ss_pred EC-CCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCc-ccHHHHHHHHHHHHhc
Q psy5584 1826 EG-PFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSH-KHFEWFIDVLRDVEKK 1903 (2014)
Q Consensus 1826 dG-PyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~-~~l~w~~~~L~~l~~~ 1903 (2014)
.| |.|.+..+.....++||||||||||||+|+++++...... .++.|+|++|+. .++ +|.++|+++.+.
T Consensus 213 ~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~~~~--------~~~~L~~G~R~~~~d~-ly~~El~~~~~~ 283 (374)
T 1ddg_A 213 FIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP--------GKNWLFFGNPHFTEDF-LYQVEWQRYVKE 283 (374)
T ss_dssp EEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHTCC--------SCEEEEEEESCHHHHC-TTHHHHHHHHHT
T ss_pred EEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhcCCC--------CCEEEEEEeCCchhhh-hHHHHHHHHHHh
Confidence 98 5567765444568999999999999999999999876322 489999999998 454 488999988765
Q ss_pred CCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCC--CHHHHHHHHHHhCCCCCeEEEEEe
Q psy5584 1904 DVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRP--DMSSFLKFVQKKHSYVSKIGVFSC 1981 (2014)
Q Consensus 1904 ~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRP--d~~~il~~l~~~~~~~~~v~V~vC 1981 (2014)
. ..+++++.+|+..... . |+. +|. +...+.+.+ . . ...||+|
T Consensus 284 ~--~~~~l~~a~Srd~~~k----~--yVq----------------------~~l~~~~~~l~~~l-~---~--~~~vYvC 327 (374)
T 1ddg_A 284 G--VLTRIDLAWSRDQKEK----V--YVQ----------------------DKLREQGAELWRWI-N---D--GAHIYVC 327 (374)
T ss_dssp T--SCCEEEEEETTSSSSC----C--CHH----------------------HHHHHTHHHHHHHH-H---T--TCEEEEE
T ss_pred C--CCcEEEEEEecCCCCC----c--cHH----------------------HHHHHhHHHHHHHH-h---C--CcEEEEE
Confidence 3 3467888888753210 0 000 110 011222222 1 1 3469999
Q ss_pred C-ChhhHHHHHHHHHhhhc
Q psy5584 1982 G-PRPLTKSIMSACEEVNK 1999 (2014)
Q Consensus 1982 G-P~~m~~~vr~a~~~~~~ 1999 (2014)
| |++|+++|++++.+...
T Consensus 328 G~p~~M~~~V~~~L~~i~~ 346 (374)
T 1ddg_A 328 GDANRMAKDVEQALLEVIA 346 (374)
T ss_dssp ECTTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHH
Confidence 9 99999999999887754
No 53
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.67 E-value=5.4e-17 Score=180.45 Aligned_cols=137 Identities=31% Similarity=0.524 Sum_probs=119.1
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|..+|.|++|.|+.+||..+++.
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~--------------------------------------------------- 39 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRS--------------------------------------------------- 39 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHH---------------------------------------------------
Confidence 46788999999999999999999988755
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC-CcH
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTE 1407 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-~~~ 1407 (2014)
+|..++..++..++..+|.|++|.|+|.||+..+...... ..+
T Consensus 40 ------------------------------------lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~ 83 (176)
T 2lhi_A 40 ------------------------------------LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSE 83 (176)
T ss_dssp ------------------------------------HTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHH
T ss_pred ------------------------------------cCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcH
Confidence 5677888899999999999999999999999887654433 346
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.||+|++|+|+.+||+.+|..++. .++++++++ |++++| |+||+|+|+||+.+|++-
T Consensus 84 ~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~-----~~~~~ei~~----l~~~~d-d~dG~I~~~EF~~~m~k~ 148 (176)
T 2lhi_A 84 QELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDD----MLREVS-DGSGEINIQQFAALLSKG 148 (176)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTC-----CCCHHHHHH----HHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCc-----ccchHHHHH----HHHhhc-CCCCeEeHHHHHHHHHhc
Confidence 78999999999999999999999999997765 899998766 667788 999999999999999764
No 54
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.66 E-value=3.9e-16 Score=174.18 Aligned_cols=172 Identities=17% Similarity=0.387 Sum_probs=131.2
Q ss_pred eHHHHHHHHHHhcCCCCHHHHHHHHHhccC-CCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHH
Q psy5584 1231 SFQEFLDTVVLFSRGHTEDKLRIIFDMCDN-DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLA 1309 (2014)
Q Consensus 1231 s~~EF~~~l~~l~~~~~eeel~~lF~~~D~-D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~ 1309 (2014)
+.+|+..++... ..++++++.+|+.||. |++|.|+++||..++..+.
T Consensus 2 ~~~el~~l~~~~--~~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~------------------------------ 49 (183)
T 1s6c_A 2 RPEGLEQLEAQT--NFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFF------------------------------ 49 (183)
T ss_dssp ----CHHHHHHS--SCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHS------------------------------
T ss_pred ChHHHHHHHHhc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHc------------------------------
Confidence 345555555443 4578888888888888 8999999999998876521
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCce
Q psy5584 1310 KAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRI 1389 (2014)
Q Consensus 1310 ~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~I 1389 (2014)
....+..+++.+|..+|.|++|.|
T Consensus 50 --------------------------------------------------------~~~~~~~~~~~~f~~~D~d~~g~i 73 (183)
T 1s6c_A 50 --------------------------------------------------------PHGDASTYAHYLFNAFDTTQTGSV 73 (183)
T ss_dssp --------------------------------------------------------TTSCCHHHHHHHHHHHCTTCSSCE
T ss_pred --------------------------------------------------------CCCChHHHHHHHHHHhCCCCCCcE
Confidence 011456678899999999999999
Q ss_pred eHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC---CCCCHHHHHHHHHHHHHHcCCCC
Q psy5584 1390 SFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART---TSLTDSQVTELIDGMFQDAGLDS 1466 (2014)
Q Consensus 1390 sf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~---~~ls~~e~~~li~~if~~~D~d~ 1466 (2014)
+++||+.++.........++++.+|+.+|.|++|.|+.+||..++..+....+. ..++++..++.+..+|+.+|.|+
T Consensus 74 ~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~ 153 (183)
T 1s6c_A 74 KFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNK 153 (183)
T ss_dssp EHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTC
T ss_pred eHHHHHHHHHHHcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCC
Confidence 999999999888777788899999999999999999999999999987322111 02555444556777999999999
Q ss_pred CCcccHHHHHHHHHhCcccchhcc
Q psy5584 1467 KDFLTYQDFKLMMRDYKGDFVAIG 1490 (2014)
Q Consensus 1467 dG~Is~eEF~~~l~~~~~~l~~~~ 1490 (2014)
||.|+|+||+.++...+..++.++
T Consensus 154 dG~i~~~Ef~~~~~~~~~~~~~l~ 177 (183)
T 1s6c_A 154 DGIVTLDEFLESXQEDDNIMRSLQ 177 (183)
T ss_dssp SSEECHHHHHHHTTSCCHHHHHHH
T ss_pred CCcEeHHHHHHHHhcChHHHHHHH
Confidence 999999999999999887766554
No 55
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.66 E-value=2.1e-16 Score=172.66 Aligned_cols=109 Identities=23% Similarity=0.349 Sum_probs=91.7
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc---CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhh
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR---GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1441 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~---~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~ 1441 (2014)
+|..++..++..++. .|.+++|.|+|+||+.++..... ....++++.+|+.||+|++|+|+.+||+++|+.++.
T Consensus 40 lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~-- 116 (159)
T 3i5g_C 40 LGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE-- 116 (159)
T ss_dssp TTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCCTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSS--
T ss_pred cCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhcccccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCC--
Confidence 456667777777654 47788999999999999877654 345678999999999999999999999999998776
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCC--CCCCcccHHHHHHHHHhCc
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGL--DSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~--d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.++++++++ |++.+|. |+||+|+|+||+++|+..|
T Consensus 117 ---~ls~~e~~~----l~~~~D~~~d~dG~I~~~EF~~~m~~~p 153 (159)
T 3i5g_C 117 ---RITEDQCND----IFTFCDIREDIDGNIKYEDLMKKVMAGP 153 (159)
T ss_dssp ---CCCHHHHHH----HHHHTTCCCCSSCCEEHHHHHHHHHHCS
T ss_pred ---CCCHHHHHH----HHHHhCcCCCCCCeEeHHHHHHHHHCCC
Confidence 899998766 6777885 8899999999999998765
No 56
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.65 E-value=6.3e-16 Score=166.33 Aligned_cols=108 Identities=35% Similarity=0.580 Sum_probs=92.3
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..++..+|.|++|.|+|+||+..+..... ....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 39 ~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~---- 114 (148)
T 1exr_A 39 LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE---- 114 (148)
T ss_dssp HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTC----
T ss_pred cCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCC----
Confidence 355667778999999999999999999999998865432 244567999999999999999999999999987765
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++++++ +|+.+|.|+||.|+|+||+.+|..
T Consensus 115 -~~~~~~~~~----~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1exr_A 115 -KLTDDEVDE----MIREADIDGDGHINYEEFVRMMVS 147 (148)
T ss_dssp -CCCHHHHHH----HHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred -CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHcc
Confidence 788888665 778899999999999999998864
No 57
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=99.65 E-value=6.3e-16 Score=183.85 Aligned_cols=208 Identities=19% Similarity=0.252 Sum_probs=160.1
Q ss_pred HHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHH-------HhCC--CCcHHHHHH----HHHhhcCCCCcceeH
Q psy5584 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS-------ALGM--KSDAVFVRM----MFNIVDKDGDGRISF 1232 (2014)
Q Consensus 1166 ~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~-------~L~~--~~~~~~l~~----lF~~~D~dgdG~Is~ 1232 (2014)
++++|. .+|.|++ |.|+.+||.. .+|. ..+..+++. +|..+|.|++|.|++
T Consensus 13 l~~~F~-~~D~d~~---------------G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~ 76 (272)
T 2be4_A 13 FLQIWQ-HFDADDN---------------GYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQI 76 (272)
T ss_dssp HHHHHH-HHCTTCC---------------SEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEH
T ss_pred HHHHHH-HhcCCCC---------------CCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeH
Confidence 445565 3688776 8999999986 4566 777777665 568999999999999
Q ss_pred HHHHHH-----------HHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhc
Q psy5584 1233 QEFLDT-----------VVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301 (2014)
Q Consensus 1233 ~EF~~~-----------l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~ 1301 (2014)
+||..+ +.......+.++++.+|+.+|.|++|.|+.+||..++..+.... +..+++.++...+..
T Consensus 77 ~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~-g~~~~~~~~~~~~~~--- 152 (272)
T 2be4_A 77 EELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQH-KKKIPPNKLDEYTDA--- 152 (272)
T ss_dssp HHHHHHHSCHHHHHHHHHHHHSCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHT-TCCCCHHHHHHHHHH---
T ss_pred HHHHHHHhhhhHHHHHHHhhccCcccHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHH---
Confidence 999999 55566678899999999999999999999999999998753211 134455544333222
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCC--------------
Q psy5584 1302 SPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM-------------- 1367 (2014)
Q Consensus 1302 ~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~-------------- 1367 (2014)
+++.+ |.++ +|.|+.+||...+..
T Consensus 153 ----------------------~~~~~--------------D~~~------dg~i~~~ef~~~~~~~~~~~~~~~~~~~~ 190 (272)
T 2be4_A 153 ----------------------MMKIF--------------DKNK------DGRLDLNDLARILALQENFLLQFKMDASS 190 (272)
T ss_dssp ----------------------HHHHH--------------CSSC------SSEEEHHHHGGGSCCSSCSSTTSCCCHHH
T ss_pred ----------------------HHHHh--------------ccCC------CCcCcHHHHHHHHhhhHHHHhhhhhhhcc
Confidence 11111 2333 458999999988743
Q ss_pred -CChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc----CCcHHHHHH----HHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1368 -KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRI----IFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1368 -~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~----~~~~e~l~~----~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
......+..+|..+|+|++|.|+.+||..++..+.. ..+++++.. +|+.+|.|+||.|+.+||..++.
T Consensus 191 ~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~~~~~ 267 (272)
T 2be4_A 191 QVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCLG 267 (272)
T ss_dssp HHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHHHHTT
T ss_pred ccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence 134577999999999999999999999999987665 566777776 99999999999999999998875
No 58
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.65 E-value=4.6e-16 Score=171.06 Aligned_cols=110 Identities=25% Similarity=0.469 Sum_probs=89.9
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..+|..+|.|++|.|+|+||+..+..... ....+.+..+|+.+|+|++|.|+.+||+.++..++.
T Consensus 57 ~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~---- 132 (169)
T 3qrx_A 57 LGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGE---- 132 (169)
T ss_dssp TSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTC----
T ss_pred cCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC----
Confidence 345566777888888889999999999999888765432 233567999999999999999999999999997765
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.++++++++ +|+.+|.|+||.|+|+||+.+|++.+
T Consensus 133 -~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~~~ 167 (169)
T 3qrx_A 133 -NLTEEELQE----MIAEADRNDDNEIDEDEFIRIMKKTS 167 (169)
T ss_dssp -CCCHHHHHH----HHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred -CCCHHHHHH----HHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence 889888655 78889999999999999999998765
No 59
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8
Probab=99.65 E-value=3.7e-15 Score=167.90 Aligned_cols=156 Identities=21% Similarity=0.356 Sum_probs=135.2
Q ss_pred HHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHHh---CCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHh
Q psy5584 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF 1242 (2014)
Q Consensus 1166 ~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~L---~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l 1242 (2014)
++++|. .+|.|++ |.|+.+||..+| +...+...++.+|..+|.|++|.|+++||..++...
T Consensus 29 l~~~F~-~~D~d~~---------------G~I~~~El~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 92 (191)
T 1y1x_A 29 LMEWFR-AVDTDGS---------------GAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI 92 (191)
T ss_dssp HHHHHH-HHCTTCS---------------SSBCHHHHHHHHCBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHH-HHcCCCC---------------CcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence 344555 3687776 899999999977 345788999999999999999999999999998754
Q ss_pred cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHH
Q psy5584 1243 SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLE 1322 (2014)
Q Consensus 1243 ~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e 1322 (2014)
++++.+|+.+|.|++|.|+.+||..++..
T Consensus 93 ------~~~~~~F~~~D~d~~G~i~~~e~~~~l~~--------------------------------------------- 121 (191)
T 1y1x_A 93 ------LSMREGFRKRDSSGDGRLDSNEVRAALLS--------------------------------------------- 121 (191)
T ss_dssp ------HHHHHHHHHHCTTSSSCBCHHHHHHHHHT---------------------------------------------
T ss_pred ------HHHHHHHHHhCCCCCCeEcHHHHHHHHHH---------------------------------------------
Confidence 68999999999999999999999998754
Q ss_pred HHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh
Q psy5584 1323 HFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS 1402 (2014)
Q Consensus 1323 ~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~ 1402 (2014)
+|..++..+++.+|..+|.|++|.|+|+||+.++...
T Consensus 122 ------------------------------------------~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~- 158 (191)
T 1y1x_A 122 ------------------------------------------SGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIFV- 158 (191)
T ss_dssp ------------------------------------------TSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-
T ss_pred ------------------------------------------hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHH-
Confidence 3445677889999999999999999999999998765
Q ss_pred cCCcHHHHHHHHhhhcCCCCCe--eeHHHHHHHHHH
Q psy5584 1403 RGHTEDKLRIIFDMCDNDRNGV--IDKGELAEMLRS 1436 (2014)
Q Consensus 1403 ~~~~~e~l~~~F~~~D~DgdG~--Is~eEf~~~L~~ 1436 (2014)
+.++.+|+.+|+|++|. ++.+||..++..
T Consensus 159 -----~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~ 189 (191)
T 1y1x_A 159 -----CRVRNVFAFYDRERTGQVTFTFDTFIGGSVS 189 (191)
T ss_dssp -----HHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred -----HHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence 56999999999999999 689999988764
No 60
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.64 E-value=6.1e-16 Score=179.01 Aligned_cols=180 Identities=17% Similarity=0.350 Sum_probs=140.3
Q ss_pred CcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHH
Q psy5584 1227 DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRE 1305 (2014)
Q Consensus 1227 dG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~ 1305 (2014)
.+.++.+++..++.... .++++++.+|+.||.+ ++|.|+.+||..++..+.
T Consensus 31 ~~~l~~~~l~~l~~~~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~-------------------------- 82 (224)
T 1s1e_A 31 MVCHRPEGLEQLEAQTN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFF-------------------------- 82 (224)
T ss_dssp -------CHHHHHHHSS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTC--------------------------
T ss_pred ccCCCHHHHHHHHHHcC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhc--------------------------
Confidence 46777777777776543 7888999999999884 999999999998875421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCC
Q psy5584 1306 LMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDG 1385 (2014)
Q Consensus 1306 ~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~Dg 1385 (2014)
....+..+++.+|+.+|.|+
T Consensus 83 ------------------------------------------------------------~~~~~~~~~~~~f~~~D~d~ 102 (224)
T 1s1e_A 83 ------------------------------------------------------------PHGDASTYAHYLFNAFDTTQ 102 (224)
T ss_dssp ------------------------------------------------------------TTSCCHHHHHHHHHHHCTTC
T ss_pred ------------------------------------------------------------CCCCcHHHHHHHHHHhcCCC
Confidence 01245667889999999999
Q ss_pred CCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHHHHc
Q psy5584 1386 DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT---SLTDSQVTELIDGMFQDA 1462 (2014)
Q Consensus 1386 dG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~---~ls~~e~~~li~~if~~~ 1462 (2014)
+|.|+++||+.++........+++++.+|+.+|.|++|.|+.+||..++..+....+.. .++++..++.++.+|+.+
T Consensus 103 ~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~ 182 (224)
T 1s1e_A 103 TGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKM 182 (224)
T ss_dssp SSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHH
T ss_pred CCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHh
Confidence 99999999999998887777888999999999999999999999999999874322210 144433445577799999
Q ss_pred CCCCCCcccHHHHHHHHHhCcccchhcccccc
Q psy5584 1463 GLDSKDFLTYQDFKLMMRDYKGDFVAIGLDCK 1494 (2014)
Q Consensus 1463 D~d~dG~Is~eEF~~~l~~~~~~l~~~~~~~~ 1494 (2014)
|.|+||.|+|+||+.++...+..++.+++..+
T Consensus 183 D~d~dG~Is~~EF~~~~~~~~~l~~~l~~~~~ 214 (224)
T 1s1e_A 183 DKNKDGIVTLDEFLESCQEDDNIMRSLQLFQN 214 (224)
T ss_dssp CTTCSSCEEHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCCCCcEeHHHHHHHHHhCHHHHHHhcCCCC
Confidence 99999999999999999999998888876544
No 61
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.64 E-value=8.7e-16 Score=166.82 Aligned_cols=110 Identities=24% Similarity=0.415 Sum_probs=95.5
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC-----CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-----HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-----~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~ 1439 (2014)
+|..++..++..+|..+|.|++|.|+|+||+.++...... ...+.++.+|+.+|+|++|.|+.+||+.+++.++.
T Consensus 43 ~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~ 122 (158)
T 2jnf_A 43 LGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDE 122 (158)
T ss_dssp TTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCTTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCT
T ss_pred hCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCC
Confidence 3455677889999999999999999999999999876543 45667999999999999999999999999998765
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1440 ~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.+|.+.+
T Consensus 123 -----~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~~~ 157 (158)
T 2jnf_A 123 -----TLSSEDLDA----MIDEIDADGSGTVDFEEFMGVMTGGD 157 (158)
T ss_dssp -----TCCHHHHHH----HHHHHCSSCCSEECSHHHHHHTSSCC
T ss_pred -----cCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHhccC
Confidence 788887655 78889999999999999999987654
No 62
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A
Probab=99.64 E-value=2.4e-15 Score=173.47 Aligned_cols=165 Identities=18% Similarity=0.275 Sum_probs=140.8
Q ss_pred hcCHHHHHHHHHHHHHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHH---hCCCCcHHHHHHHHHhhcCCCCc
Q psy5584 1152 AETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA---LGMKSDAVFVRMMFNIVDKDGDG 1228 (2014)
Q Consensus 1152 ~L~~~~~~r~L~h~~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~---L~~~~~~~~l~~lF~~~D~dgdG 1228 (2014)
.++.++.++ ++++|. .+|.|++ |.|+.+||..+ ++...+...++.+|..+|.|++|
T Consensus 44 ~l~~~e~~~-----l~~~F~-~~D~d~~---------------G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~dg 102 (220)
T 3sjs_A 44 TIPLDQYTR-----IYQWFM-GVDRDRS---------------GTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNG 102 (220)
T ss_dssp GCCHHHHHH-----HHHHHH-HHCTTCC---------------SSBCHHHHHHCCBGGGBCCCHHHHHHHHHHHCTTCSS
T ss_pred cCCHHHHHH-----HHHHHH-HhCCCCC---------------CcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCC
Confidence 466777666 455666 4788776 89999999975 47778999999999999999999
Q ss_pred ceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHH
Q psy5584 1229 RISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELML 1308 (2014)
Q Consensus 1229 ~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~ 1308 (2014)
.|+++||..++..+ ++++.+|+.+|.|++|.|+.+||..++..
T Consensus 103 ~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~I~~~El~~~l~~------------------------------- 145 (220)
T 3sjs_A 103 HISFYEFMAMYKFM------ELAYNLFVMNARARSGTLEPHEILPALQQ------------------------------- 145 (220)
T ss_dssp CBCHHHHHHHHHHH------HHHHHHHHHHCCSSTTEECHHHHHHHHHH-------------------------------
T ss_pred cCCHHHHHHHHHHH------HHHHHHHHHHCCCCCCCCcHHHHHHHHHH-------------------------------
Confidence 99999999998875 67999999999999999999999998864
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCc
Q psy5584 1309 AKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGR 1388 (2014)
Q Consensus 1309 ~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~ 1388 (2014)
+|...+.++++.++..+| |++|.
T Consensus 146 --------------------------------------------------------~g~~~~~~~~~~l~~~~d-d~dg~ 168 (220)
T 3sjs_A 146 --------------------------------------------------------LGFYINQRTSLLLHRLFA-RGMAF 168 (220)
T ss_dssp --------------------------------------------------------HTCCCCHHHHHHHHHHHC---CCS
T ss_pred --------------------------------------------------------hCCCCCHHHHHHHHHHhc-CCCCc
Confidence 345667788999999999 99999
Q ss_pred eeHHHHHHHHHHHhcCCcHHHHHHHHhhh-cCCCCC------eeeHHHHHHHHHHH
Q psy5584 1389 ISFQEFLDTVVLFSRGHTEDKLRIIFDMC-DNDRNG------VIDKGELAEMLRSL 1437 (2014)
Q Consensus 1389 Isf~EFl~~l~~~~~~~~~e~l~~~F~~~-D~DgdG------~Is~eEf~~~L~~l 1437 (2014)
|+|+||+.++..+. .++.+|+.+ |++++| .|+.+||..++..+
T Consensus 169 I~~~eF~~~~~~l~------~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~~ 218 (220)
T 3sjs_A 169 CDLNCWIAICAFAA------QTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTSL 218 (220)
T ss_dssp EEHHHHHHHHHHHH------HHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHH------HHHHHHHHhcccCCCCCcccccceeHHHHHHHHHHh
Confidence 99999999998773 599999999 999999 88999999887653
No 63
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.64 E-value=1.5e-15 Score=170.66 Aligned_cols=174 Identities=21% Similarity=0.373 Sum_probs=140.7
Q ss_pred CCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcCh
Q psy5584 1225 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSP 1303 (2014)
Q Consensus 1225 dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~ 1303 (2014)
+.+|.|+.+|+..+...+ ..+.++++.+|+.+|.| ++|.|+++||..++..+.
T Consensus 3 ~~~~~l~~~el~~~~~~~--~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~------------------------ 56 (190)
T 2l2e_A 3 KSQSKLSQDQLQDLVRST--RFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFF------------------------ 56 (190)
T ss_dssp CSSCCSCHHHHHHHHHHH--CSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHC------------------------
T ss_pred cccccCCHHHHHHHHHhc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhC------------------------
Confidence 356788888888887775 35778999999999999 899999999999886521
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHcc
Q psy5584 1304 RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDK 1383 (2014)
Q Consensus 1304 ~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~ 1383 (2014)
....+...+..+|..+|.
T Consensus 57 --------------------------------------------------------------~~~~~~~~~~~~f~~~D~ 74 (190)
T 2l2e_A 57 --------------------------------------------------------------PFGDPSAFAEYVFNVFDA 74 (190)
T ss_dssp --------------------------------------------------------------CCSCHHHHHHHHHHHHCS
T ss_pred --------------------------------------------------------------CCCCccHHHHHHHHHhcC
Confidence 112345668899999999
Q ss_pred CCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH----HHhhc---CCCCCHHHHHHHHH
Q psy5584 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL----VEMAR---TTSLTDSQVTELID 1456 (2014)
Q Consensus 1384 DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l----~~~~~---~~~ls~~e~~~li~ 1456 (2014)
|++|.|+++||..++.........++++.+|+.+|.|++|.|+.+||..++..+ +.... ...+++++ ++
T Consensus 75 d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~ 150 (190)
T 2l2e_A 75 DKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKR----VN 150 (190)
T ss_dssp SSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHH----HH
T ss_pred CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHH----HH
Confidence 999999999999999877777778899999999999999999999999999874 32100 01345554 45
Q ss_pred HHHHHcCCCCCCcccHHHHHHHHHhCcccchhcc
Q psy5584 1457 GMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIG 1490 (2014)
Q Consensus 1457 ~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~ 1490 (2014)
.+|+.+|.|+||.|+|+||..++..++..+..++
T Consensus 151 ~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~l~ 184 (190)
T 2l2e_A 151 KIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALS 184 (190)
T ss_dssp HHHHHHTCCSSCCBCHHHHHHHHHTCTHHHHHHH
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHhCcHHHHHHH
Confidence 5889999999999999999999999987766554
No 64
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.64 E-value=8.3e-16 Score=163.79 Aligned_cols=135 Identities=28% Similarity=0.473 Sum_probs=117.5
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|..+|.|++|.|+.+||..++..
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------------------------------------------- 34 (142)
T 2bl0_C 6 SEFKEAFELFDSERTGFITKEGLQTVLKQ--------------------------------------------------- 34 (142)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHH---------------------------------------------------
Confidence 56888999999999999999999988754
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH-hcCCcH
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTE 1407 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~-~~~~~~ 1407 (2014)
+|..++..++..+|..+|.|++|.|+|+||+.++... ......
T Consensus 35 ------------------------------------~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~ 78 (142)
T 2bl0_C 35 ------------------------------------FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSE 78 (142)
T ss_dssp ------------------------------------HTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCH
T ss_pred ------------------------------------hCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChH
Confidence 3556677889999999999999999999999998873 344677
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
+.++.+|+.+|+|++|.|+.+||+.++..++. .+++++++. +|+.+| |+||.|+|+||+.+|.
T Consensus 79 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-----~~~~~~~~~----~~~~~d-~~dg~i~~~eF~~~~~ 141 (142)
T 2bl0_C 79 DILRQAFRTFDPEGTGYIPKAALQDALLNLGD-----RLKPHEFAE----FLGITE-TEKGQIRYDNFINTMF 141 (142)
T ss_dssp HHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSS-----CCCHHHHHH----HHHHHC-CSSSEECSHHHHTTTC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCC-----CCCHHHHHH----HHHHhC-CCCCcEeHHHHHHHHc
Confidence 88999999999999999999999999997654 788887655 788899 9999999999998764
No 65
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.63 E-value=2.3e-15 Score=166.51 Aligned_cols=64 Identities=19% Similarity=0.275 Sum_probs=58.6
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHh-c-------CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-S-------RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l-~-------~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
...++++|..+| |++|.|+.+||..++..+ + ...++++++.+|+.+|.|++|.|+++||..++.
T Consensus 3 ~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~ 74 (173)
T 1alv_A 3 VRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWN 74 (173)
T ss_dssp HHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred hhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence 356899999999 999999999999999987 5 678899999999999999999999999988764
No 66
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.63 E-value=2.3e-15 Score=169.43 Aligned_cols=173 Identities=21% Similarity=0.256 Sum_probs=134.0
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcCC-CCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~~-~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
+.|+.+++..... ...+.++++.+|..+|.+ ++|.|+.+||..++..+... .+++.++.+|+.+|.|++|.|+++||
T Consensus 6 s~l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef 85 (193)
T 1bjf_A 6 SKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREF 85 (193)
T ss_dssp CCCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHH
T ss_pred ccCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHhcCcCChHHHHHHHHHHhCCCCCCcCcHHHH
Confidence 4688888887543 356788999999999998 89999999999999887653 45778999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++...
T Consensus 86 ~~~~~~~------------------------------------------------------------------------- 92 (193)
T 1bjf_A 86 IIALSVT------------------------------------------------------------------------- 92 (193)
T ss_dssp HHHHHHH-------------------------------------------------------------------------
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 9987542
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc--C----------CcHHHHHHHHhhhcC
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--G----------HTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~--~----------~~~e~l~~~F~~~D~ 1419 (2014)
+...+...+..+|..+|.|++|.|+++||..++..... + ..++.+..+|+.+|.
T Consensus 93 --------------~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 158 (193)
T 1bjf_A 93 --------------SRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDT 158 (193)
T ss_dssp --------------TSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCT
T ss_pred --------------cCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCC
Confidence 11234566888999999999999999999999876521 1 223569999999999
Q ss_pred CCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy5584 1420 DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFL 1470 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~I 1470 (2014)
|++|.|+.+||..++.. +++ +..+| .+|.|+||.|
T Consensus 159 d~dG~I~~~Ef~~~~~~-----------~~~----~~~~~-~~D~~~dG~i 193 (193)
T 1bjf_A 159 NRDGKLSLEEFIRGAKS-----------DPS----IVRLL-QCDPSSAGQF 193 (193)
T ss_dssp TCSSEECHHHHHHHHHH-----------CTH----HHHTT-CC--------
T ss_pred CCCCeEeHHHHHHHHhc-----------CHH----HHHHh-ccCCCCCCCC
Confidence 99999999999999863 112 44477 8999999976
No 67
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Probab=99.63 E-value=6.4e-15 Score=162.72 Aligned_cols=155 Identities=24% Similarity=0.473 Sum_probs=131.9
Q ss_pred HHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHHhC----CCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHH
Q psy5584 1166 FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL 1241 (2014)
Q Consensus 1166 ~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~L~----~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~ 1241 (2014)
++++|. .+|.|++ |.|+.+||..+|. ...+...++.+|..+|.|++|.|+++||..++..
T Consensus 9 l~~~F~-~~D~d~~---------------G~i~~~e~~~~l~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~ 72 (172)
T 2znd_A 9 LWNVFQ-RVDKDRS---------------GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKY 72 (172)
T ss_dssp HHHHHH-HHCTTCS---------------SCEEHHHHHHHCCCSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHH
T ss_pred HHHHHH-HhCCCCC---------------CcCcHHHHHHHHHhcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 445565 4787776 8999999999773 4578899999999999999999999999998875
Q ss_pred hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHH
Q psy5584 1242 FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKL 1321 (2014)
Q Consensus 1242 l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~ 1321 (2014)
. ++++.+|+.+|.|++|.|+.+||..++..
T Consensus 73 ~------~~~~~~F~~~D~d~~G~i~~~el~~~l~~-------------------------------------------- 102 (172)
T 2znd_A 73 I------TDWQNVFRTYDRDNSGMIDKNELKQALSG-------------------------------------------- 102 (172)
T ss_dssp H------HHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------------------------------------
T ss_pred H------HHHHHHHHHHCCCCCCccCHHHHHHHHHH--------------------------------------------
Confidence 4 68999999999999999999999998754
Q ss_pred HHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH
Q psy5584 1322 EHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF 1401 (2014)
Q Consensus 1322 e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~ 1401 (2014)
+|..++..+++.+|..+|.|++|.|+|+||+.++...
T Consensus 103 -------------------------------------------~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 139 (172)
T 2znd_A 103 -------------------------------------------FGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIVL 139 (172)
T ss_dssp -------------------------------------------TTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred -------------------------------------------cCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 3445667789999999999999999999999998765
Q ss_pred hcCCcHHHHHHHHhhhcCCCCCeeeH--HHHHHHHH
Q psy5584 1402 SRGHTEDKLRIIFDMCDNDRNGVIDK--GELAEMLR 1435 (2014)
Q Consensus 1402 ~~~~~~e~l~~~F~~~D~DgdG~Is~--eEf~~~L~ 1435 (2014)
+.++.+|+.+|+|++|.|+. +||..++.
T Consensus 140 ------~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~ 169 (172)
T 2znd_A 140 ------QRLTDIFRRYDTDQDGWIQVSYEQYLSMVF 169 (172)
T ss_dssp ------HHHHHHHHHHCTTSSSCCCCCHHHHHHHHH
T ss_pred ------HHHHHHHHHhCCCCCCeEeeeHHHHHHHHH
Confidence 67999999999999999975 55555543
No 68
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.63 E-value=4.7e-16 Score=166.95 Aligned_cols=108 Identities=19% Similarity=0.345 Sum_probs=92.4
Q ss_pred hCCCChHHHHHHHHHHH-ccCCCCceeHHHHHHHHHHH------hcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIV-DKDGDGRISFQEFLDTVVLF------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~-D~DgdG~Isf~EFl~~l~~~------~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
+|..++..++..+|..+ |.|++|.|+|+||+.++... ......+.++.+|+.+|+|++|.|+.+||+.++..+
T Consensus 33 ~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~ 112 (148)
T 1m45_A 33 IGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL 112 (148)
T ss_dssp TTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHS
T ss_pred hCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHc
Confidence 35566778899999999 99999999999999998876 455677889999999999999999999999999987
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1438 VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1438 ~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
+. .+++++++. +|+.+|.|+||.|+|+||+.+|.+
T Consensus 113 g~-----~~~~~~~~~----~~~~~d~d~dg~i~~~eF~~~~~~ 147 (148)
T 1m45_A 113 GE-----KLTDAEVDE----LLKGVEVDSNGEIDYKKFIEDVLR 147 (148)
T ss_dssp TT-----CCCHHHHHH----HHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred CC-----CCCHHHHHH----HHHHhCCCCCCeEeHHHHHHHHhc
Confidence 65 788887655 788899999999999999999864
No 69
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.63 E-value=2.8e-15 Score=173.69 Aligned_cols=120 Identities=19% Similarity=0.443 Sum_probs=104.0
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1450 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e 1450 (2014)
..++++|..+|.|++|.|+++||+.++..... ....++++.+|+.+|.|++|.|+.+||+.++..+....+. .+++++
T Consensus 85 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~-~~~~~~ 163 (226)
T 2zfd_A 85 LFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM-NLKDTV 163 (226)
T ss_dssp HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTC-CCCHHH
T ss_pred HHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCC-CCCHHH
Confidence 34678999999999999999999998887653 3557789999999999999999999999999865433344 899999
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhcccc
Q psy5584 1451 VTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGLD 1492 (2014)
Q Consensus 1451 ~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~~ 1492 (2014)
+++++..+|+.+|.|+||.|+|+||+.++..++..+..+++.
T Consensus 164 ~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~~ 205 (226)
T 2zfd_A 164 IEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQ 205 (226)
T ss_dssp HHHHHHHHHHHHCSSCSSEECHHHHHHHHHHSGGGGGGGCCG
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhchH
Confidence 999999999999999999999999999999999888777653
No 70
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.63 E-value=2.8e-15 Score=163.14 Aligned_cols=108 Identities=20% Similarity=0.346 Sum_probs=94.6
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..+|..+|.+++|.|+|+||+..+.... .....+.++.+|+.+|.|++|.|+.+||+.++..++.
T Consensus 52 ~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~---- 127 (161)
T 3fwb_A 52 LGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGE---- 127 (161)
T ss_dssp TTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC----
T ss_pred cCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCC----
Confidence 35567788899999999999999999999999987643 3455788999999999999999999999999997765
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+.+|.|++|.|+|+||+.+|.+
T Consensus 128 -~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~~~ 160 (161)
T 3fwb_A 128 -TLTDEELRA----MIEEFDLDGDGEINENEFIAICTD 160 (161)
T ss_dssp -CCCHHHHHH----HHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred -CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHhc
Confidence 888887655 788899999999999999999875
No 71
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.62 E-value=2e-15 Score=162.46 Aligned_cols=107 Identities=21% Similarity=0.370 Sum_probs=92.4
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCc-----HHHHHHHHhhhcCCCCCeeeHHHHHHHHHH-HH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT-----EDKLRIIFDMCDNDRNGVIDKGELAEMLRS-LV 1438 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~-----~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~-l~ 1438 (2014)
+|..++..++..++..+|.|++|.|+|+||+..+........ .+.++.+|+.+|.|++|.|+.+||+.++.. ++
T Consensus 40 ~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~ 119 (153)
T 3ox6_A 40 MGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG 119 (153)
T ss_dssp TTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHS
T ss_pred cCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc
Confidence 345667788999999999999999999999999877655433 567999999999999999999999999998 55
Q ss_pred HhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1439 EMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1439 ~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
. .+++++++. +|+.+|.|+||.|+|+||+.+|.
T Consensus 120 ~-----~~~~~~~~~----~~~~~d~~~dg~i~~~eF~~~~~ 152 (153)
T 3ox6_A 120 H-----QVGHRDIEE----IIRDVDLNGDGRVDFEEFVRMMS 152 (153)
T ss_dssp S-----CCCHHHHHH----HHHHHCSSSSSSBCHHHHHHHTC
T ss_pred C-----CCCHHHHHH----HHHHhCCCCCCeEeHHHHHHHHh
Confidence 4 788887655 78889999999999999999875
No 72
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.62 E-value=3.6e-16 Score=177.14 Aligned_cols=109 Identities=22% Similarity=0.346 Sum_probs=79.6
Q ss_pred CCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCC
Q psy5584 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1446 (2014)
Q Consensus 1367 ~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~l 1446 (2014)
..++..++..+|..+|.|++|.|+|+||+.++........++.++.+|+.+|.|++|.|+.+||+.++..++. +. .+
T Consensus 88 ~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~--~~-~~ 164 (197)
T 3pm8_A 88 YQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDI--EN-PL 164 (197)
T ss_dssp ----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHHHHHHHHHHCTTCSSEECHHHHHHHHC------CC-HH
T ss_pred CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhccc--CC-CC
Confidence 3445667889999999999999999999988766655667789999999999999999999999999986521 11 33
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1447 TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1447 s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++ ++.+|+.+|.|+||.|+|+||+.+|++.
T Consensus 165 ~~~~----~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 196 (197)
T 3pm8_A 165 IDKA----IDSLLQEVDLNGDGEIDFHEFMLMMSKK 196 (197)
T ss_dssp HHHH----HHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred CHHH----HHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence 4444 5568899999999999999999999864
No 73
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.62 E-value=2.1e-15 Score=164.29 Aligned_cols=108 Identities=31% Similarity=0.553 Sum_probs=92.8
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc----CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHh
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1440 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~----~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~ 1440 (2014)
+|..++..++..+|..+|.|++|.|+++||+.++..... ....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 48 ~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~- 126 (161)
T 1dtl_A 48 LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGE- 126 (161)
T ss_dssp TTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC---
T ss_pred cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-
Confidence 345667788999999999999999999999999887653 456778999999999999999999999999987765
Q ss_pred hcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1441 ARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1441 ~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.+|..
T Consensus 127 ----~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~ 159 (161)
T 1dtl_A 127 ----TITEDDIEE----LMKDGDKNNDGRIDYDEFLEFMKG 159 (161)
T ss_dssp ----CCCHHHHHH----HHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred ----CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHHc
Confidence 788887655 788899999999999999999875
No 74
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.61 E-value=2.9e-15 Score=160.19 Aligned_cols=106 Identities=29% Similarity=0.491 Sum_probs=91.6
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC-CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..+|..+|.+++|.|+|+||+.++...... ...+.+..+|+.+|+|++|.|+.+||+.++..++.
T Consensus 40 ~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~---- 115 (147)
T 4ds7_A 40 LGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGE---- 115 (147)
T ss_dssp TTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC----
T ss_pred hCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCC----
Confidence 3456677889999999999999999999999998765433 44578999999999999999999999999997764
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.+++++++. +|+.+| |++|.|+|+||+.+|.
T Consensus 116 -~~~~~~~~~----~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 116 -KLTDAEVDE----MLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp -CCCHHHHHH----HHHHHS-SSCSSEEHHHHHHHTT
T ss_pred -CCCHHHHHH----HHHHhc-CCCCcCcHHHHHHHHh
Confidence 788888665 777899 9999999999999875
No 75
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.61 E-value=2.5e-15 Score=169.36 Aligned_cols=108 Identities=22% Similarity=0.439 Sum_probs=88.2
Q ss_pred CCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCC
Q psy5584 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1446 (2014)
Q Consensus 1367 ~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~l 1446 (2014)
...+ .+++.+|..+|.|++|.|+|+||+.++.... ...++.++.+|+.+|+|++|.|+.+||+.++..... +. .+
T Consensus 83 ~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~-~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~--~~-~l 157 (191)
T 3k21_A 83 LKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK-QLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNK--KG-NI 157 (191)
T ss_dssp CCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-GCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSS--CS-CC
T ss_pred CCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-hccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCC--CC-CC
Confidence 3344 5688899999999999999999998875443 256788999999999999999999999999975211 11 67
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1447 TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1447 s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
++++.++ ++.+|+.+|.|+||.|+|+||+.+|+
T Consensus 158 ~~~~~~~-~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 158 TQRDVNR-VKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp CHHHHHH-HHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred CHhHHHH-HHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 7765444 67799999999999999999999885
No 76
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.61 E-value=4.7e-16 Score=176.75 Aligned_cols=104 Identities=23% Similarity=0.416 Sum_probs=89.8
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHh-----------------cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFS-----------------RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-----------------~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
++.+|..+|.|++|.|+|+||+.++.... .....+.++.+|+.+|.|++|.|+.+||+.++..
T Consensus 63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~ 142 (202)
T 2bec_A 63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL 142 (202)
T ss_dssp HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 66777888888888888888888776654 2345678999999999999999999999999997
Q ss_pred H-HHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1437 L-VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1437 l-~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+ +. .++++++++++..+|+.+|.|+||.|+|+||+.+|...
T Consensus 143 ~~g~-----~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 184 (202)
T 2bec_A 143 MVGV-----QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKM 184 (202)
T ss_dssp SCCS-----CCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTS
T ss_pred hcCC-----CCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHh
Confidence 6 54 78999999999889999999999999999999998765
No 77
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.60 E-value=5.5e-15 Score=165.80 Aligned_cols=173 Identities=21% Similarity=0.392 Sum_probs=133.8
Q ss_pred CcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHH
Q psy5584 1227 DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRE 1305 (2014)
Q Consensus 1227 dG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~ 1305 (2014)
.+.++.+++..+.... ..+.++++.+|+.+|.+ ++|.|+.+||..++..+.
T Consensus 5 ~~~l~~~~l~~l~~~~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~-------------------------- 56 (190)
T 1g8i_A 5 NSKLKPEVVEELTRKT--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFF-------------------------- 56 (190)
T ss_dssp CCSCCHHHHHHHHHTS--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHC--------------------------
T ss_pred cccCCHHHHHHHHHcc--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhC--------------------------
Confidence 3456666666666543 45778888888888888 889999999888876521
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCC
Q psy5584 1306 LMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDG 1385 (2014)
Q Consensus 1306 ~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~Dg 1385 (2014)
+...+...++.+|..+|.|+
T Consensus 57 ------------------------------------------------------------~~~~~~~~~~~~f~~~D~d~ 76 (190)
T 1g8i_A 57 ------------------------------------------------------------PFGDPTKFATFVFNVFDENK 76 (190)
T ss_dssp ------------------------------------------------------------TTSCTHHHHHHHHHHHCTTC
T ss_pred ------------------------------------------------------------CCCChHHHHHHHHHHHhcCC
Confidence 01123455888999999999
Q ss_pred CCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC-------CCCCHHHHHHHHHHH
Q psy5584 1386 DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART-------TSLTDSQVTELIDGM 1458 (2014)
Q Consensus 1386 dG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~-------~~ls~~e~~~li~~i 1458 (2014)
+|.|+++||+.++.........++++.+|+.+|.|++|.|+.+||..++..+....+. ..++++ .+..+
T Consensus 77 ~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~----~~~~~ 152 (190)
T 1g8i_A 77 DGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEK----RVDRI 152 (190)
T ss_dssp SSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHH----HHHHH
T ss_pred CCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHH----HHHHH
Confidence 9999999999998887777778899999999999999999999999999875321110 023333 35668
Q ss_pred HHHcCCCCCCcccHHHHHHHHHhCcccchhccc
Q psy5584 1459 FQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGL 1491 (2014)
Q Consensus 1459 f~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~ 1491 (2014)
|+.+|.|+||.|+|+||..++..++..++.+++
T Consensus 153 f~~~D~d~dG~i~~~ef~~~~~~~~~~~~~~~~ 185 (190)
T 1g8i_A 153 FAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185 (190)
T ss_dssp HHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCC
T ss_pred HHHhcCCCCCcEeHHHHHHHHHhChHHHHHHhh
Confidence 999999999999999999999999887766554
No 78
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.60 E-value=1.3e-15 Score=165.09 Aligned_cols=105 Identities=24% Similarity=0.408 Sum_probs=86.3
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC-CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..++ .+++|.|+|.||+..+...... .+++.++.+|+.||+|++|+|+.+||+.+|..++.
T Consensus 45 lg~~~~~~~~~~~~----~~~~~~i~f~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~---- 116 (153)
T 3i5g_B 45 LGRVPPDDELNAML----KECPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGD---- 116 (153)
T ss_dssp TTSCCCHHHHHHHH----HTSSSCCCSHHHHHTTTTTTTTCCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSS----
T ss_pred cCCCccHHHHHHHH----HhccCCccHHHHHHHHHhhhcccccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCC----
Confidence 44555665555544 4567889999999988765443 46788999999999999999999999999998766
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
+++++++++ |++.+|.| ||.|+|+||+.+|.+..
T Consensus 117 -~ls~~ei~~----~~~~~D~~-dG~I~y~EF~~~m~~~~ 150 (153)
T 3i5g_B 117 -NFSKEEIKN----VWKDAPLK-NKQFNYNKMVDIKGKAE 150 (153)
T ss_dssp -CCCHHHHHH----HHTTCCEE-TTEECHHHHHHHHHCSC
T ss_pred -cCCHHHHHH----HHHHhCCC-cCEEcHHHHHHHhcCCC
Confidence 899998766 77889987 99999999999998754
No 79
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.60 E-value=2.4e-15 Score=163.02 Aligned_cols=110 Identities=25% Similarity=0.273 Sum_probs=95.4
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc--CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhc
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1442 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~--~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~ 1442 (2014)
+|..++..++..+ ..+|.|++|.|+|+||+.++..... ....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 40 ~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--- 115 (156)
T 1wdc_C 40 LGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGE--- 115 (156)
T ss_dssp TTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSS---
T ss_pred cCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC---
Confidence 3455667778888 8899999999999999999988765 566788999999999999999999999999997764
Q ss_pred CCCCCHHHHHHHHHHHHHH--cCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1443 TTSLTDSQVTELIDGMFQD--AGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1443 ~~~ls~~e~~~li~~if~~--~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
.+++++++. +|+. +|.|++|.|+|+||+.+|...+.
T Consensus 116 --~~~~~~~~~----~~~~~~~D~d~dg~i~~~eF~~~~~~~~~ 153 (156)
T 1wdc_C 116 --RLSDEDVDE----IIKLTDLQEDLEGNVKYEDFVKKVMAGPY 153 (156)
T ss_dssp --CCCHHHHHH----HHHHHTCCCCTTSEEEHHHHHHHHHHCSC
T ss_pred --CCCHHHHHH----HHHHhCCCCCCCCcEeHHHHHHHHhcCCC
Confidence 788887655 7888 99999999999999999987653
No 80
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.60 E-value=1.4e-14 Score=159.23 Aligned_cols=61 Identities=18% Similarity=0.231 Sum_probs=55.6
Q ss_pred HHHHhhcCCCCcceeHHHHHHHHHHhcC-----CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1217 MMFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1217 ~lF~~~D~dgdG~Is~~EF~~~l~~l~~-----~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
+.|..+|+|++|.|+.+||..++..++. ..++++++.+|+.+|.|++|.|+++||..++..
T Consensus 5 ~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 70 (167)
T 1gjy_A 5 YGYFASVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAV 70 (167)
T ss_dssp HHHHHHHCCTTSCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH
Confidence 3589999999999999999999999876 678999999999999999999999999987743
No 81
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Probab=99.60 E-value=6.1e-15 Score=163.15 Aligned_cols=141 Identities=25% Similarity=0.391 Sum_probs=124.8
Q ss_pred cCcCHHHHHHHh----C-------CCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCC
Q psy5584 1195 TSLSRAEFASAL----G-------MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRN 1263 (2014)
Q Consensus 1195 ~~Ls~~El~~~L----~-------~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~d 1263 (2014)
|.|+.+||..+| | ...+...++.+|..+|.|++|.|+++||..++... ++++.+|+.+|.|++
T Consensus 18 G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~ 91 (173)
T 1alv_A 18 MEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI------KKWQAIYKQFDVDRS 91 (173)
T ss_dssp TSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------HHHHHHHHHHCTTCC
T ss_pred CCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH------HHHHHHHHHHCCCCC
Confidence 899999999755 4 56788999999999999999999999999998754 689999999999999
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccc
Q psy5584 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRR 1343 (2014)
Q Consensus 1264 G~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d 1343 (2014)
|.|+.+||..++..
T Consensus 92 G~i~~~el~~~l~~------------------------------------------------------------------ 105 (173)
T 1alv_A 92 GTIGSSELPGAFEA------------------------------------------------------------------ 105 (173)
T ss_dssp SSBCTTTHHHHHHH------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHH------------------------------------------------------------------
Confidence 99999999988754
Q ss_pred CCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCC
Q psy5584 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1423 (2014)
Q Consensus 1344 ~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG 1423 (2014)
+|..++..+++.++..+| |++|.|+|+||+.++... +.+..+|+.+|+|++|
T Consensus 106 ---------------------~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G 157 (173)
T 1alv_A 106 ---------------------AGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVRL------DAMFRAFKSLDKDGTG 157 (173)
T ss_dssp ---------------------HTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHHH------HHHHHHHHHHSSSCCS
T ss_pred ---------------------cCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCC
Confidence 345566778999999999 999999999999998765 6799999999999999
Q ss_pred eeeHHHHHHHHHH
Q psy5584 1424 VIDKGELAEMLRS 1436 (2014)
Q Consensus 1424 ~Is~eEf~~~L~~ 1436 (2014)
.|+.+ +.+++..
T Consensus 158 ~i~~~-~~~~l~~ 169 (173)
T 1alv_A 158 QIQVN-IQEWLQL 169 (173)
T ss_dssp EEEEE-HHHHHHH
T ss_pred eecHh-HHHHHHH
Confidence 99998 8887763
No 82
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.60 E-value=8.5e-15 Score=162.19 Aligned_cols=143 Identities=15% Similarity=0.227 Sum_probs=121.8
Q ss_pred cCcCHHHHHHHh---------CCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCc
Q psy5584 1195 TSLSRAEFASAL---------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1265 (2014)
Q Consensus 1195 ~~Ls~~El~~~L---------~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~ 1265 (2014)
+.|+.+||+.+| +...+.++++.+|..+|.|++|.|+++||..++... ++++.+|+.+| |++|+
T Consensus 19 G~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------~~l~~aF~~fD-d~~G~ 91 (174)
T 2i7a_A 19 SDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------VHYQHVFQKVQ-TSPGV 91 (174)
T ss_dssp CCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------HHHHHHHHHHC-SBTTB
T ss_pred CcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhc-CCCCc
Confidence 899999999755 346788999999999999999999999999988764 68999999999 99999
Q ss_pred ccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCC
Q psy5584 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDD 1345 (2014)
Q Consensus 1266 Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d 1345 (2014)
|+.+||..++..+..
T Consensus 92 I~~~El~~~l~~l~~----------------------------------------------------------------- 106 (174)
T 2i7a_A 92 LLSSDLWKAIENTDF----------------------------------------------------------------- 106 (174)
T ss_dssp EEGGGHHHHHHTCGG-----------------------------------------------------------------
T ss_pred CCHHHHHHHHHHhHh-----------------------------------------------------------------
Confidence 999999998754210
Q ss_pred CcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCC-e
Q psy5584 1346 ETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG-V 1424 (2014)
Q Consensus 1346 ~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG-~ 1424 (2014)
..|..++.++++.++..+| |++|.|+|+||+.++... +.+..+|+.+|+|++| .
T Consensus 107 ------------------~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~------~~~~~~F~~~D~d~~GI~ 161 (174)
T 2i7a_A 107 ------------------LRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRL------EAMAKTFRNLSKDGKGLY 161 (174)
T ss_dssp ------------------GTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHH------HHHHHHHHHHCSSSSCCC
T ss_pred ------------------ccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCce
Confidence 0155677888999999999 999999999999998765 5699999999999999 3
Q ss_pred eeHHHHHHHH
Q psy5584 1425 IDKGELAEML 1434 (2014)
Q Consensus 1425 Is~eEf~~~L 1434 (2014)
++.+||..+.
T Consensus 162 ~~~~Ef~~~~ 171 (174)
T 2i7a_A 162 LTEMEWMSLV 171 (174)
T ss_dssp CCHHHHHHHH
T ss_pred ecHHHHHHHH
Confidence 4888887764
No 83
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.59 E-value=5.1e-15 Score=164.43 Aligned_cols=140 Identities=34% Similarity=0.558 Sum_probs=117.8
Q ss_pred HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFRE 1327 (2014)
Q Consensus 1248 eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~ 1327 (2014)
.++++.+|..+|.|++|.|+.+||..++..
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-------------------------------------------------- 39 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRS-------------------------------------------------- 39 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHH--------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------------------------------------------
Confidence 356888999999999999999999988754
Q ss_pred HHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCc
Q psy5584 1328 AYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHT 1406 (2014)
Q Consensus 1328 ~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~ 1406 (2014)
+|..++..++..+|..+|.|++|.|+|+||+..+..... ...
T Consensus 40 -------------------------------------~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~ 82 (179)
T 2f2o_A 40 -------------------------------------LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDS 82 (179)
T ss_dssp -------------------------------------TTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------cCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCccc
Confidence 345667778999999999999999999999998876532 234
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.+.++.+|+.+|+|++|.|+.+||+.++..++. .+++++++. +|+.+|.|+||.|+|+||+.+|....
T Consensus 83 ~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~-----~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~~~ 150 (179)
T 2f2o_A 83 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDE----MIREADIDGDGQVNYEEFVQMMTAKG 150 (179)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHC-------CCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence 567999999999999999999999999998776 788887655 78889999999999999999997654
No 84
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A
Probab=99.59 E-value=1.3e-14 Score=165.40 Aligned_cols=174 Identities=20% Similarity=0.216 Sum_probs=141.1
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcCC-CCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~~-~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
+.|+.+|+..++. +..+..+++.+|..+|.+ ++|.|+++||..++..+... .+.++++.+|+.+|.|++|.|+++||
T Consensus 14 g~l~~~el~~~~~~~~~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef 93 (207)
T 2d8n_A 14 GALSKEILEELQLNTKFSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEY 93 (207)
T ss_dssp TCCCHHHHHHHHHHSSCCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTSCCHHHHHHHHHHHCTTCCSEEEHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCCCcHHHHHHHHHHhcCCCCCeEeHHHH
Confidence 6899999998663 446889999999999999 79999999999999987654 78899999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++....
T Consensus 94 ~~~~~~~~------------------------------------------------------------------------ 101 (207)
T 2d8n_A 94 VIALHMTT------------------------------------------------------------------------ 101 (207)
T ss_dssp HHHHHHHS------------------------------------------------------------------------
T ss_pred HHHHHHHc------------------------------------------------------------------------
Confidence 99875421
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH----h----cC------CcHHHHHHHHhhh
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----S----RG------HTEDKLRIIFDMC 1417 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~----~----~~------~~~e~l~~~F~~~ 1417 (2014)
...+...+..+|..+|.|++|.|+++||..++..+ . .. ..++.+..+|+.+
T Consensus 102 ---------------~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~ 166 (207)
T 2d8n_A 102 ---------------AGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYF 166 (207)
T ss_dssp ---------------CSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHT
T ss_pred ---------------CCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHc
Confidence 11223457889999999999999999999998875 2 11 2246799999999
Q ss_pred cCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcc
Q psy5584 1418 DNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFL 1470 (2014)
Q Consensus 1418 D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~I 1470 (2014)
|.|++|.|+.+||..++.... . +..+|..+|..-++++
T Consensus 167 D~d~dG~I~~~Ef~~~~~~~~-----------~----~~~~~~~~~~~~~~~~ 204 (207)
T 2d8n_A 167 GKNDDDKLTEKEFIEGTLANK-----------E----ILRLIQFEPQKVKEKM 204 (207)
T ss_dssp TCCTTCCEEHHHHHHHHHHCH-----------H----HHHHHSCCCSSCCCCC
T ss_pred CCCCCCcCcHHHHHHHHHhCh-----------H----HHHHHhhhhHHHHHHh
Confidence 999999999999999987421 1 2335666666655554
No 85
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.59 E-value=3.3e-15 Score=159.45 Aligned_cols=138 Identities=22% Similarity=0.338 Sum_probs=116.2
Q ss_pred CCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFF 1325 (2014)
Q Consensus 1246 ~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~ 1325 (2014)
+++++++.+|..+|.|++|.|+.+||..++..
T Consensus 2 ls~~el~~~F~~~D~d~~G~i~~~e~~~~l~~------------------------------------------------ 33 (145)
T 2bl0_B 2 ASADQIQECFQIFDKDNDGKVSIEELGSALRS------------------------------------------------ 33 (145)
T ss_dssp CCHHHHHHHHHHHCTTCSSCEEGGGHHHHHHH------------------------------------------------
T ss_pred CCHHHHHHHHHHhCCCCcCccCHHHHHHHHHH------------------------------------------------
Confidence 45667999999999999999999999988765
Q ss_pred HHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh--c
Q psy5584 1326 REAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS--R 1403 (2014)
Q Consensus 1326 ~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~--~ 1403 (2014)
+|..++..++..++.. |++|.|+|+||+.++.... .
T Consensus 34 ---------------------------------------~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~~~ 71 (145)
T 2bl0_B 34 ---------------------------------------LGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIKTP 71 (145)
T ss_dssp ---------------------------------------TTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCCCG
T ss_pred ---------------------------------------hCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhhcC
Confidence 3445566777888877 7899999999999886542 2
Q ss_pred CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1404 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1404 ~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
....+.++.+|+.+|+|++|.|+.+||+.++..++. .+++++++. +|+.+|.|+||.|+|+||+.++.+.
T Consensus 72 ~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~-----~~~~~~~~~----~~~~~d~~~dg~i~~~eF~~~~~~~ 141 (145)
T 2bl0_B 72 TEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGD-----ALTSSEVEE----LMKEVSVSGDGAINYESFVDMLVTG 141 (145)
T ss_dssp GGGHHHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSS-----CCCHHHHHH----HHTTCCCCTTSEEEHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCC-----CCCHHHHHH----HHHHcCCCCCCcEeHHHHHHHHHhc
Confidence 345678999999999999999999999999997654 788887655 7888999999999999999999864
No 86
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.59 E-value=6.6e-15 Score=167.49 Aligned_cols=122 Identities=27% Similarity=0.473 Sum_probs=101.0
Q ss_pred CCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC---
Q psy5584 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART--- 1443 (2014)
Q Consensus 1367 ~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~--- 1443 (2014)
...+..+++.+|..+|.|++|.|+++||+.++.........++++.+|+.+|.|++|.|+.+||..++..+....+.
T Consensus 54 ~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~ 133 (204)
T 1jba_A 54 NEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSV 133 (204)
T ss_dssp SSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCc
Confidence 34567779999999999999999999999999988777888899999999999999999999999999987321110
Q ss_pred --------CC-CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhcccc
Q psy5584 1444 --------TS-LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGLD 1492 (2014)
Q Consensus 1444 --------~~-ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~~ 1492 (2014)
.. .+++ .++.+|+.+|.|+||.|+|+||+.++.+.+...+.+...
T Consensus 134 ~~~~~~~g~~~~~~~----~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~ 187 (204)
T 1jba_A 134 EVEAEQQGKLLTPEE----VVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQMD 187 (204)
T ss_dssp CTTSSTTTCCCCHHH----HHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHHSS
T ss_pred cccccccCchhhHHH----HHHHHHHHhCCCCCCeEcHHHHHHHHHcChHHHHHHHhc
Confidence 01 2233 356689999999999999999999999988877666543
No 87
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5
Probab=99.59 E-value=1.3e-14 Score=163.32 Aligned_cols=175 Identities=21% Similarity=0.355 Sum_probs=139.0
Q ss_pred CCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChH
Q psy5584 1226 GDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPR 1304 (2014)
Q Consensus 1226 gdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~ 1304 (2014)
..+.++..++..+... ...+.++++.+|+.+|.+ ++|.|+.+||..++..+
T Consensus 4 ~~s~l~~~~l~~l~~~--~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~-------------------------- 55 (193)
T 1bjf_A 4 QNSKLRPEVMQDLLES--TDFTEHEIQEWYKGFLRDCPSGHLSMEEFKKIYGNF-------------------------- 55 (193)
T ss_dssp -CCCCCHHHHHHHHHH--SSCCHHHHHHHHHHHHHHSTTSEEEHHHHHHHHTTT--------------------------
T ss_pred ccccCCHHHHHHHHHH--cCCCHHHHHHHHHHHHHHCCCCCcCHHHHHHHHHHh--------------------------
Confidence 4567888888886554 357889999999999998 89999999999887541
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCC-CChHHHHHHHHHHHcc
Q psy5584 1305 ELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM-KSDAVFVRMMFNIVDK 1383 (2014)
Q Consensus 1305 ~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~-~~s~~~l~~lf~~~D~ 1383 (2014)
+. .....+++.+|..+|.
T Consensus 56 -------------------------------------------------------------~~~~~~~~~~~~~f~~~D~ 74 (193)
T 1bjf_A 56 -------------------------------------------------------------FPYGDASKFAEHVFRTFDA 74 (193)
T ss_dssp -------------------------------------------------------------SSSSCCHHHHHHHHHHHCS
T ss_pred -------------------------------------------------------------cCcCChHHHHHHHHHHhCC
Confidence 11 1134568999999999
Q ss_pred CCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC-CCCCHHH--HHHHHHHHHH
Q psy5584 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART-TSLTDSQ--VTELIDGMFQ 1460 (2014)
Q Consensus 1384 DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~-~~ls~~e--~~~li~~if~ 1460 (2014)
|++|.|+++||..++.........+.++.+|+.+|.|++|.|+.+||..++..+....+. ..+++++ .++.+..+|+
T Consensus 75 d~~g~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~ 154 (193)
T 1bjf_A 75 NGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFR 154 (193)
T ss_dssp SCSSEEEHHHHHHHHHHHTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHH
T ss_pred CCCCcCcHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHH
Confidence 999999999999999888777788899999999999999999999999999875321110 0344332 2345677999
Q ss_pred HcCCCCCCcccHHHHHHHHHhCcccchhc
Q psy5584 1461 DAGLDSKDFLTYQDFKLMMRDYKGDFVAI 1489 (2014)
Q Consensus 1461 ~~D~d~dG~Is~eEF~~~l~~~~~~l~~~ 1489 (2014)
.+|.|+||.|+++||..++...+...+.+
T Consensus 155 ~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~ 183 (193)
T 1bjf_A 155 QMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183 (193)
T ss_dssp HSCTTCSSEECHHHHHHHHHHCTHHHHTT
T ss_pred HhCCCCCCeEeHHHHHHHHhcCHHHHHHh
Confidence 99999999999999999998877654444
No 88
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.58 E-value=1.4e-14 Score=158.80 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=54.9
Q ss_pred HHHhhcCCCCcceeHHHHHHHHHHhcC-----CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1218 MFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1218 lF~~~D~dgdG~Is~~EF~~~l~~l~~-----~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.|..+|+|++|.|+.+||..++..++. ..++++++.+|+.+|.|++|.|+++||..++..
T Consensus 4 ~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 68 (165)
T 1k94_A 4 TYFSAVAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAA 68 (165)
T ss_dssp HHHHHHHGGGTSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 589999999999999999999999876 678999999999999999999999999987643
No 89
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.58 E-value=5e-15 Score=166.19 Aligned_cols=153 Identities=23% Similarity=0.340 Sum_probs=122.7
Q ss_pred CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHH
Q psy5584 1244 RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEH 1323 (2014)
Q Consensus 1244 ~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~ 1323 (2014)
.....++++.+|+.+|.|++|.|+++||..++..+....+.
T Consensus 35 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~--------------------------------------- 75 (191)
T 3khe_A 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGD--------------------------------------- 75 (191)
T ss_dssp CTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-------------------------------------------
T ss_pred CHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhccc---------------------------------------
Confidence 44556789999999999999999999999998764210000
Q ss_pred HHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc
Q psy5584 1324 FFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 1403 (2014)
Q Consensus 1324 ~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~ 1403 (2014)
... ..+...+..++..+|..+|.|++|.|+++||+.++.....
T Consensus 76 ---------------------~~~----------------~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~ 118 (191)
T 3khe_A 76 ---------------------TVS----------------DLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQL 118 (191)
T ss_dssp ----------------------CC----------------HHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHH
T ss_pred ---------------------ccc----------------cccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcc
Confidence 000 0122345667999999999999999999999999866655
Q ss_pred CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1404 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1404 ~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
....+.++.+|+.+|.|++|.|+.+||+.++. +. .++++++++ +|+.+|.|+||.|+|+||+.+|.+..
T Consensus 119 ~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~-----~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~~~ 187 (191)
T 3khe_A 119 LLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VT-----EVDDETWHQ----VLQECDKNNDGEVDFEEFVEMMQKIC 187 (191)
T ss_dssp HCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SS-----CCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cC-----CCCHHHHHH----HHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 67778899999999999999999999999987 32 788887655 78889999999999999999998643
No 90
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=99.58 E-value=1.6e-14 Score=155.53 Aligned_cols=137 Identities=23% Similarity=0.353 Sum_probs=122.1
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
.+++++|..+|+|++|.|+.+||..++..++...+++++..++..+|.+++|.|++.||...+....
T Consensus 10 ~el~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~------------- 76 (148)
T 2lmt_A 10 AEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQM------------- 76 (148)
T ss_dssp HHHHHHHHHHHCSSCCEEEGGGHHHHHHHHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTT-------------
T ss_pred HHHHHHHHHHcCCCCCeECHHHHHHHHHhcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHh-------------
Confidence 3489999999999999999999999999999999999999999999999999999999998775411
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
....+.+
T Consensus 77 -------------------------------------------------------------------------~~~~~~~ 83 (148)
T 2lmt_A 77 -------------------------------------------------------------------------RETDTEE 83 (148)
T ss_dssp -------------------------------------------------------------------------TTTTTHH
T ss_pred -------------------------------------------------------------------------cccCcHH
Confidence 0112345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|+.+|+|++|.|+.+||..++..+....+.+++..+|+.+|.|+||.|+.+||.++|.
T Consensus 84 ~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~ 146 (148)
T 2lmt_A 84 EMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMIS 146 (148)
T ss_dssp HHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHT
T ss_pred HHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 578899999999999999999999999888888899999999999999999999999998875
No 91
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.58 E-value=6.2e-15 Score=160.52 Aligned_cols=108 Identities=28% Similarity=0.507 Sum_probs=85.1
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC----CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhh
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG----HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1441 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~----~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~ 1441 (2014)
|..++..++..+|..+|.|++|.|+++||+..+...... ...+.++.+|+.+|.|++|.|+.+||+.++..++.
T Consensus 50 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~-- 127 (162)
T 1top_A 50 GQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE-- 127 (162)
T ss_dssp TCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC--
T ss_pred CCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC--
Confidence 344556667777777777777777777777776554321 14567999999999999999999999999987654
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.+|...
T Consensus 128 ---~~~~~~~~~----~~~~~d~~~dg~i~~~eF~~~~~~~ 161 (162)
T 1top_A 128 ---HVTEEDIED----LMKDSDKNNDGRIDFDEFLKMMEGV 161 (162)
T ss_dssp ---CCCHHHHHH----HHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred ---CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHhhc
Confidence 788887655 7888999999999999999998753
No 92
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.58 E-value=1.3e-14 Score=155.50 Aligned_cols=105 Identities=21% Similarity=0.334 Sum_probs=90.7
Q ss_pred CCCChHHHHHHHHHHH---ccCCCCceeHHHHHHHHHHH---hcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH
Q psy5584 1366 GMKSDAVFVRMMFNIV---DKDGDGRISFQEFLDTVVLF---SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~---D~DgdG~Isf~EFl~~l~~~---~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~ 1439 (2014)
|..++..++..++..+ |.|+ |.|+|+||+..+... ......+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 38 ~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~ 116 (149)
T 2mys_C 38 GQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE 116 (149)
T ss_pred CCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccCCcchHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCC
Confidence 4556677788999999 9999 999999999998875 23355678999999999999999999999999998765
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1440 ~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+. |.|++|.|+|+||+.+|.+
T Consensus 117 -----~~~~~~~~~----~~~~-d~~~dg~i~~~eF~~~~~~ 148 (149)
T 2mys_C 117 -----KMTEEEVEE----LMKG-QEDSNGCINYEAFVKHIMS 148 (149)
T ss_pred -----CCCHHHHHH----HHhh-CCCCCCcEeHHHHHHHHhc
Confidence 788887655 7888 9999999999999999864
No 93
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.58 E-value=6.6e-15 Score=165.20 Aligned_cols=115 Identities=23% Similarity=0.429 Sum_probs=91.2
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC-------C
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART-------T 1444 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~-------~ 1444 (2014)
..++.+|..+|.|++|.|+++||..++.........++++.+|+.+|.|++|.|+.+||..++..+....+. .
T Consensus 63 ~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~ 142 (190)
T 1fpw_A 63 DFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE 142 (190)
T ss_dssp HHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCC
T ss_pred HHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCccccc
Confidence 457788888888888888888888888877766777889999999999999999999999998875321110 0
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhcc
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIG 1490 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~ 1490 (2014)
.+++++ +..+|+.+|.|+||.|+++||..++...+..++.++
T Consensus 143 ~~~~~~----~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~ 184 (190)
T 1fpw_A 143 ATPEMR----VKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALN 184 (190)
T ss_dssp CCHHHH----HHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHH
T ss_pred chHHHH----HHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHHh
Confidence 133333 566899999999999999999999999988776654
No 94
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}
Probab=99.58 E-value=2.5e-14 Score=158.51 Aligned_cols=149 Identities=16% Similarity=0.181 Sum_probs=127.2
Q ss_pred hcCCCCcceeHHHHHHHHHHh------cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHH
Q psy5584 1222 VDKDGDGRISFQEFLDTVVLF------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTEL 1295 (2014)
Q Consensus 1222 ~D~dgdG~Is~~EF~~~l~~l------~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~ 1295 (2014)
-++|++|.|+.+||..+|+.+ +...++++++.+|+.+|.|++|.|+++||..++...
T Consensus 13 ~~~~~dG~I~~~EL~~~l~~l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~----------------- 75 (174)
T 2i7a_A 13 GLVPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL----------------- 75 (174)
T ss_dssp CSCC-CCCEEHHHHHHHHHHHHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH-----------------
T ss_pred ccCCCCCcCCHHHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH-----------------
Confidence 468999999999999999997 457789999999999999999999999999876320
Q ss_pred HHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHH
Q psy5584 1296 IDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVR 1375 (2014)
Q Consensus 1296 i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~ 1375 (2014)
..++
T Consensus 76 ----------------------------------------------------------------------------~~l~ 79 (174)
T 2i7a_A 76 ----------------------------------------------------------------------------VHYQ 79 (174)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------HHHH
Confidence 2367
Q ss_pred HHHHHHccCCCCceeHHHHHHHHHHH----hcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1376 MMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1451 (2014)
Q Consensus 1376 ~lf~~~D~DgdG~Isf~EFl~~l~~~----~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~ 1451 (2014)
.+|+.+| |++|.|+.+||..++..+ ....+++++..+++.+| |++|.|+.+||..++....
T Consensus 80 ~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~------------- 144 (174)
T 2i7a_A 80 HVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMRLE------------- 144 (174)
T ss_dssp HHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHHHH-------------
T ss_pred HHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHHHH-------------
Confidence 8899999 999999999999999877 55677889999999999 9999999999999887431
Q ss_pred HHHHHHHHHHcCCCCCC-cccHHHHHHHHH
Q psy5584 1452 TELIDGMFQDAGLDSKD-FLTYQDFKLMMR 1480 (2014)
Q Consensus 1452 ~~li~~if~~~D~d~dG-~Is~eEF~~~l~ 1480 (2014)
.+..+|+.+|.|++| .++++||+.++.
T Consensus 145 --~~~~~F~~~D~d~~GI~~~~~Ef~~~~~ 172 (174)
T 2i7a_A 145 --AMAKTFRNLSKDGKGLYLTEMEWMSLVM 172 (174)
T ss_dssp --HHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred --HHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence 255689999999999 459999998764
No 95
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.58 E-value=2.1e-14 Score=162.68 Aligned_cols=155 Identities=17% Similarity=0.195 Sum_probs=113.1
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcC-----CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCC
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1287 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~-----~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~ 1287 (2014)
..+++ |..+|+|++|.|+.+||..++..++. ..++++++.+|+.+|.|++|.|+++||..++...
T Consensus 33 ~~l~~-F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~--------- 102 (198)
T 1juo_A 33 DPLYG-YFAAVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--------- 102 (198)
T ss_dssp CTTHH-HHHHHHTTTTEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---------
T ss_pred HHHHH-HHHHhCCCCCcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH---------
Confidence 45778 99999999999999999999999875 5789999999999999999999999999876431
Q ss_pred CHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCC
Q psy5584 1288 TDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM 1367 (2014)
Q Consensus 1288 s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~ 1367 (2014)
T Consensus 103 -------------------------------------------------------------------------------- 102 (198)
T 1juo_A 103 -------------------------------------------------------------------------------- 102 (198)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCC
Q psy5584 1368 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1447 (2014)
Q Consensus 1368 ~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls 1447 (2014)
..+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+ |++|.|+.+||..++..+.
T Consensus 103 ----~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~~--------- 167 (198)
T 1juo_A 103 ----NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKLR--------- 167 (198)
T ss_dssp ----HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHHH---------
T ss_pred ----HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHHH---------
Confidence 1255566666777777777777766666655555666666666666 6667777777766665321
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcccH--HHHHHH
Q psy5584 1448 DSQVTELIDGMFQDAGLDSKDFLTY--QDFKLM 1478 (2014)
Q Consensus 1448 ~~e~~~li~~if~~~D~d~dG~Is~--eEF~~~ 1478 (2014)
.+..+|+.+|.|++|.|+. ++|+.+
T Consensus 168 ------~~~~~F~~~D~d~~G~is~~~~~~l~~ 194 (198)
T 1juo_A 168 ------ALTDSFRRRDTAQQGVVNFPYDDFIQC 194 (198)
T ss_dssp ------HHHHHHHHTCTTCCSEEEEEHHHHHHH
T ss_pred ------HHHHHHHHhCCCCCCeEeecHHHHHHH
Confidence 1334666677777776665 444433
No 96
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=99.58 E-value=7.2e-15 Score=182.78 Aligned_cols=191 Identities=14% Similarity=0.249 Sum_probs=129.5
Q ss_pred cccCCCEEEEEecCCCCCcccccccCCCCC--CCeEEEEEEec------------CCccHHHHhhhccCCCCCCCCCcEE
Q psy5584 1758 TYHSGQWVRLACTAFKNAAYHSFTLTSAPH--ENFLSCHIKAQ------------GPWTWKLRNYFDPCNFNASEDQPKI 1823 (2014)
Q Consensus 1758 ~~~pGQyv~L~~p~~~~~e~HPFTIaS~p~--~~~l~l~Ir~~------------G~~T~~L~~~~~~~~~~~~~~~~~v 1823 (2014)
+..+||++.+ +| ..+.|||||+|+|. ++.++|+|+.+ |..|..|.+ +..+ ....+
T Consensus 156 ~~p~~~~l~~-lp---~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~-l~~G------d~v~v 224 (393)
T 4dql_A 156 EMKFSEFIAL-LP---SIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAE-LQEG------DTITC 224 (393)
T ss_dssp CCCHHHHHHT-SC---BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHH-CCTT------CEEEE
T ss_pred CCCHHHHHHh-CC---CCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHh-CCCc------CEEEE
Confidence 3456676655 33 35899999999996 47899999977 668888876 3332 22344
Q ss_pred EEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCc-ccHHHHHHHHHHHHh
Q psy5584 1824 RLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSH-KHFEWFIDVLRDVEK 1902 (2014)
Q Consensus 1824 ~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~-~~l~w~~~~L~~l~~ 1902 (2014)
.|.||+|.+..+.....++||||||||||||++++++.......+ ....++.|+|++|+. +++ +|.++|+++++
T Consensus 225 ~v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g----~~~~~v~L~~G~R~~~~d~-ly~~el~~~~~ 299 (393)
T 4dql_A 225 FISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQG----QSLGEAHLYFGCRSPHEDY-LYQEELENAQS 299 (393)
T ss_dssp EEECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTT----CCCCCEEEEEEESCTTTCC-TTHHHHHHHHH
T ss_pred EEEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcC----CCCCCEEEEEEECCcchhh-HHHHHHHHHHh
Confidence 589999998765555679999999999999999999854322112 123589999999995 554 58899999876
Q ss_pred cCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeC
Q psy5584 1903 KDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCG 1982 (2014)
Q Consensus 1903 ~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCG 1982 (2014)
. +.+++++.+++..... .. |+ .+.-|.+...+.+.+ . ....||+||
T Consensus 300 ~---~~l~l~~a~Sr~~~~~---k~--yV--------------------q~~l~~~~~~l~~~l-~-----~~~~vYvCG 345 (393)
T 4dql_A 300 E---GIITLHTAFSRMPNQP---KT--YV--------------------QHVMEQDGKKLIELL-D-----QGAHFYICG 345 (393)
T ss_dssp T---TSCEEEEEESSCTTSC---CC--CH--------------------HHHHHHTHHHHHHHH-H-----TTCEEEEEE
T ss_pred C---CCeEEEEEEeCCCCCC---Cc--ch--------------------hhHHHhCHHHHHHHH-h-----CCcEEEEEC
Confidence 4 5678888888742211 00 00 000112223333322 2 135699999
Q ss_pred C-hhhHHHHHHHHHhhh
Q psy5584 1983 P-RPLTKSIMSACEEVN 1998 (2014)
Q Consensus 1983 P-~~m~~~vr~a~~~~~ 1998 (2014)
| +.|.++|++++.+..
T Consensus 346 p~~~M~~~V~~~L~~i~ 362 (393)
T 4dql_A 346 DGSQMAPAVEATLMKSY 362 (393)
T ss_dssp ETTTHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHHHH
Confidence 9 578889999888763
No 97
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A
Probab=99.58 E-value=1e-14 Score=159.88 Aligned_cols=140 Identities=19% Similarity=0.365 Sum_probs=123.9
Q ss_pred cCcCHHHHHHHh---CC-----CCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcc
Q psy5584 1195 TSLSRAEFASAL---GM-----KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266 (2014)
Q Consensus 1195 ~~Ls~~El~~~L---~~-----~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~I 1266 (2014)
|.|+.+||..+| +. ..+...++.+|..+|.|++|.|+++||..++... ++++.+|+.+|.|++|.|
T Consensus 14 G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i 87 (165)
T 1k94_A 14 GEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------NAWKENFMTVDQDGSGTV 87 (165)
T ss_dssp TSBCHHHHHHHHHHHTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSBC
T ss_pred CcCCHHHHHHHHHHhccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCceE
Confidence 899999999755 54 5688999999999999999999999999988764 689999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCC
Q psy5584 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1346 (2014)
Q Consensus 1267 s~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~ 1346 (2014)
+.+||..++..
T Consensus 88 ~~~el~~~l~~--------------------------------------------------------------------- 98 (165)
T 1k94_A 88 EHHELRQAIGL--------------------------------------------------------------------- 98 (165)
T ss_dssp CHHHHHHHHHH---------------------------------------------------------------------
T ss_pred CHHHHHHHHHH---------------------------------------------------------------------
Confidence 99999998754
Q ss_pred cccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeee
Q psy5584 1347 TGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1426 (2014)
Q Consensus 1347 ~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is 1426 (2014)
+|..++..+++.++..+ |++|.|+|+||+.++... +.+..+|+.+|+|++|.|+
T Consensus 99 ------------------~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~ 152 (165)
T 1k94_A 99 ------------------MGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL------RALTDFFRKRDHLQQGSAN 152 (165)
T ss_dssp ------------------TTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH------HHHHHHHHTTCTTCCSEEE
T ss_pred ------------------hCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEe
Confidence 34456677788888888 889999999999999775 6799999999999999999
Q ss_pred HHHHHHHHHH
Q psy5584 1427 KGELAEMLRS 1436 (2014)
Q Consensus 1427 ~eEf~~~L~~ 1436 (2014)
.+ +++++..
T Consensus 153 ~~-~~~~l~~ 161 (165)
T 1k94_A 153 FI-YDDFLQG 161 (165)
T ss_dssp EE-HHHHHHH
T ss_pred ee-HHHHHHH
Confidence 99 9988874
No 98
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.57 E-value=8.5e-15 Score=158.16 Aligned_cols=106 Identities=30% Similarity=0.605 Sum_probs=94.9
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcC-CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH-HHHhhcCCCCCHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS-LVEMARTTSLTDSQ 1450 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~-l~~~~~~~~ls~~e 1450 (2014)
.+..+|..+|.|++|.|+|+||+.++...... ...+.++.+|+.+|+|++|.|+.+||+.++.. ++. .+++++
T Consensus 39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~-----~~~~~~ 113 (155)
T 3ll8_B 39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-----NLKDTQ 113 (155)
T ss_dssp THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGG-----GSCHHH
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcc-----CCCHHH
Confidence 47889999999999999999999998765433 56688999999999999999999999999998 455 789999
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1451 VTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1451 ~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
+.+++..+|..+|.|+||.|+|+||+.++....
T Consensus 114 ~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 114 LQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 999888888889999999999999999998753
No 99
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.57 E-value=1.2e-14 Score=162.86 Aligned_cols=101 Identities=15% Similarity=0.235 Sum_probs=85.4
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhc-------CCcHHHHH----HHHhhhcCCCCCeeeHHHHHHHHHHHHHhh
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-------GHTEDKLR----IIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1441 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-------~~~~e~l~----~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~ 1441 (2014)
.++.+|..+|.|++|.|+|+||+..+..... ....+.++ .+|+.+|+|++|.|+.+||+.+++.++.
T Consensus 63 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~-- 140 (191)
T 1uhk_A 63 AVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGI-- 140 (191)
T ss_dssp HHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTS--
T ss_pred HHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCC--
Confidence 5888999999999999999999998776532 12223344 8999999999999999999999998765
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++++++ +|+.+|.|+||.|+|+||+.++...
T Consensus 141 ---~~~~~~~~~----~~~~~D~d~dG~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 141 ---IQSSEDCEE----TFRVCDIDESGQLDVDEMTRQHLGF 174 (191)
T ss_dssp ---CCSHHHHHH----HHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred ---CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 788887655 7888999999999999999999863
No 100
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Probab=99.57 E-value=2.1e-14 Score=157.89 Aligned_cols=140 Identities=22% Similarity=0.441 Sum_probs=122.9
Q ss_pred cCcCHHHHHHHh---CC-----CCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcc
Q psy5584 1195 TSLSRAEFASAL---GM-----KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266 (2014)
Q Consensus 1195 ~~Ls~~El~~~L---~~-----~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~I 1266 (2014)
|.|+.+||..++ +. ..+...++.+|..+|.|++|.|+++||..++... ++++.+|+.+|.|++|.|
T Consensus 16 G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i 89 (167)
T 1gjy_A 16 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDSDRSGTV 89 (167)
T ss_dssp SCBCHHHHHHHHHHHTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------HHHHHHHHHHCTTCCSEE
T ss_pred CcCCHHHHHHHHHhhcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------HHHHHHHHHhCCCCCCcC
Confidence 899999999755 54 5688999999999999999999999999988764 689999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCC
Q psy5584 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1346 (2014)
Q Consensus 1267 s~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~ 1346 (2014)
+.+||..++..
T Consensus 90 ~~~el~~~l~~--------------------------------------------------------------------- 100 (167)
T 1gjy_A 90 DPQELQKALTT--------------------------------------------------------------------- 100 (167)
T ss_dssp CHHHHHHHHHT---------------------------------------------------------------------
T ss_pred CHHHHHHHHHH---------------------------------------------------------------------
Confidence 99999988754
Q ss_pred cccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeee
Q psy5584 1347 TGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1426 (2014)
Q Consensus 1347 ~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is 1426 (2014)
+|..++..+++.++..+ |++|.|+|+||+.++... +.+..+|+.+|+|++|.|+
T Consensus 101 ------------------~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~i~ 154 (167)
T 1gjy_A 101 ------------------MGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVKL------RALTDSFRRRDSAQQGMVN 154 (167)
T ss_dssp ------------------TTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHHH------HHHHHHHHHHCTTCCSEEE
T ss_pred ------------------cCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHHH------HHHHHHHHHhCCCCCeeEE
Confidence 34456677788899888 889999999999998765 5699999999999999999
Q ss_pred HHHHHHHHHH
Q psy5584 1427 KGELAEMLRS 1436 (2014)
Q Consensus 1427 ~eEf~~~L~~ 1436 (2014)
.+ +.+++..
T Consensus 155 ~~-~~~~l~~ 163 (167)
T 1gjy_A 155 FS-YDDFIQC 163 (167)
T ss_dssp EE-HHHHHHH
T ss_pred ee-HHHHHHH
Confidence 98 8877764
No 101
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.57 E-value=6.9e-15 Score=160.07 Aligned_cols=109 Identities=22% Similarity=0.321 Sum_probs=92.6
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc---CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhh
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR---GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1441 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~---~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~ 1441 (2014)
+|..++..++..++..+|.+ +|.|+|+||+.++..... ....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 40 lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-- 116 (159)
T 2ovk_C 40 LGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE-- 116 (159)
T ss_dssp TTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTTCSTTCCHHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSS--
T ss_pred cCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhhccCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC--
Confidence 45566778888899889874 799999999999864332 346788999999999999999999999999998765
Q ss_pred cCCCCCHHHHHHHHHHHHH--HcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1442 RTTSLTDSQVTELIDGMFQ--DAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~--~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.++++++++ +|+ .+|.|+||.|+|+||+.+|...+
T Consensus 117 ---~~~~~~~~~----~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 153 (159)
T 2ovk_C 117 ---RITEDQCND----IFTFCDIREDIDGNIKYEDLMKKVMAGP 153 (159)
T ss_dssp ---CCCHHHHHH----HHHHTTCCCCTTCCEEHHHHHHHHHHCS
T ss_pred ---CCCHHHHHH----HHHHhcCCCCCCCcEeHHHHHHHHhcCC
Confidence 788888655 788 89999999999999999998765
No 102
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=99.57 E-value=3e-15 Score=198.76 Aligned_cols=206 Identities=13% Similarity=0.186 Sum_probs=137.6
Q ss_pred CCCEEEEEecCCCCCcccccccCCCCC--CCeEEEEEEec-------------CCccHHHHhhhccCCCCCCCCCcEEEE
Q psy5584 1761 SGQWVRLACTAFKNAAYHSFTLTSAPH--ENFLSCHIKAQ-------------GPWTWKLRNYFDPCNFNASEDQPKIRL 1825 (2014)
Q Consensus 1761 pGQyv~L~~p~~~~~e~HPFTIaS~p~--~~~l~l~Ir~~-------------G~~T~~L~~~~~~~~~~~~~~~~~v~I 1825 (2014)
|+||+...+|. ...|||||+|+|. ++.+.|+|+.+ |..|..|.+ +. ++..|.|
T Consensus 418 p~~~l~~~lp~---l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~-l~--------~Gd~v~v 485 (688)
T 1tll_A 418 PATLLLTQLSL---LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNR-IQ--------ADDVVPC 485 (688)
T ss_dssp CHHHHHHHSCB---CCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTT-CC--------TTSEEEE
T ss_pred CHHHHHHhCcc---cceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHh-CC--------CCCEEEE
Confidence 45555555554 4889999999996 47899999865 667888764 33 2348999
Q ss_pred EC-CCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcc-cHHHHHHHHHHHHhc
Q psy5584 1826 EG-PFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHK-HFEWFIDVLRDVEKK 1903 (2014)
Q Consensus 1826 dG-PyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~-~l~w~~~~L~~l~~~ 1903 (2014)
.| |.|.+..+.....++||||||||||||+++++++....... .....+++|+|++|+.+ ++. |.++|+++.+.
T Consensus 486 ~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~---~~~~~~v~L~~G~R~~~~D~l-y~dEL~~~~~~ 561 (688)
T 1tll_A 486 FVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHK---GMNPCPMVLVFGCRQSKIDHI-YREETLQAKNK 561 (688)
T ss_dssp EEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHS---CCCCCCEEEEEEESCTTTTCT-THHHHHHHHHT
T ss_pred EeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhc---cCCCCCEEEEEEeccchhhhh-HHHHHHHHHHc
Confidence 99 66677654444678999999999999999999987642100 01235899999999987 444 68999988765
Q ss_pred CCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCC-HHHHHHHHHHhCCCCCeEEEEEeC
Q psy5584 1904 DVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPD-MSSFLKFVQKKHSYVSKIGVFSCG 1982 (2014)
Q Consensus 1904 ~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd-~~~il~~l~~~~~~~~~v~V~vCG 1982 (2014)
. ..+++++.+|+..... .. |+... + +-+ ...+...+.. ....||+||
T Consensus 562 ~--~~~~l~~a~Sr~~~~~---k~--yVq~~-l-------------------~~~l~~~l~~~l~~-----~~~~vYvCG 609 (688)
T 1tll_A 562 G--VFRELYTAYSREPDRP---KK--YVQDV-L-------------------QEQLAESVYRALKE-----QGGHIYVCG 609 (688)
T ss_dssp T--SEEEEEEEESSCTTSC---CC--CHHHH-H-------------------HHSSHHHHHHHHHT-----SCCEEEEEE
T ss_pred C--CceEEEEEECCCCCCC---cc--chhhh-h-------------------HHhHHHHHHHhhcc-----CCcEEEEeC
Confidence 3 4578888888853210 00 00000 0 000 1122222211 135699999
Q ss_pred ChhhHHHHHHHHHhhhcCC-CC-------------CeEEEEEecCC
Q psy5584 1983 PRPLTKSIMSACEEVNKGR-KL-------------PYFIHHFENFG 2014 (2014)
Q Consensus 1983 P~~m~~~vr~a~~~~~~~~-g~-------------~~~~~h~E~Fg 2014 (2014)
|++|+++|++++.+..... |+ +.-++|.|.|+
T Consensus 610 p~~M~~~V~~~L~~i~~~~gg~~~~~a~~~l~~l~~~~ry~~Evf~ 655 (688)
T 1tll_A 610 DVTMAADVLKAIQRIMTQQGKLSEEDAGVFISRLRDDNRYHEDIFG 655 (688)
T ss_dssp EHHHHHHHHHHHHHHHHTTTCCCTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHhhhhcCCEEEEecC
Confidence 9999999999998863322 23 34479999985
No 103
>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}
Probab=99.56 E-value=1.9e-14 Score=174.29 Aligned_cols=145 Identities=26% Similarity=0.416 Sum_probs=127.2
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
..++.+|+++ ++++|..+|+|++|.|+.+||..+|..++...++++++.+|+.+|.|++|.|+++||..+
T Consensus 294 E~Lt~EEI~E----------LREaF~~fDkDgdG~IS~eELk~aLrsLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~l 363 (440)
T 3u0k_A 294 DQLTEEQIAE----------FKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLIM 363 (440)
T ss_dssp BCCCHHHHHH----------HHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHH
T ss_pred hhhhHHHHHH----------HHHHHHHHcCCCCCEECHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence 5788888855 899999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccc
Q psy5584 1275 LRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT 1354 (2014)
Q Consensus 1275 l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g 1354 (2014)
+.....
T Consensus 364 ms~~lk-------------------------------------------------------------------------- 369 (440)
T 3u0k_A 364 MARKMK-------------------------------------------------------------------------- 369 (440)
T ss_dssp HHTC----------------------------------------------------------------------------
T ss_pred HHHHhc--------------------------------------------------------------------------
Confidence 643100
Q ss_pred cccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH
Q psy5584 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434 (2014)
Q Consensus 1355 ~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L 1434 (2014)
.....+++..+|+.+|+|++|.|+.+||..++..+....+++++..+|+.+|.|+||.|+.+||.++|
T Consensus 370 ------------~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmM 437 (440)
T 3u0k_A 370 ------------DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437 (440)
T ss_dssp ----------------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHH
T ss_pred ------------CCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 00112457788999999999999999999999988888889999999999999999999999999987
Q ss_pred H
Q psy5584 1435 R 1435 (2014)
Q Consensus 1435 ~ 1435 (2014)
.
T Consensus 438 t 438 (440)
T 3u0k_A 438 T 438 (440)
T ss_dssp C
T ss_pred C
Confidence 5
No 104
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.56 E-value=3.1e-15 Score=186.44 Aligned_cols=164 Identities=31% Similarity=0.478 Sum_probs=125.2
Q ss_pred hcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhc
Q psy5584 1222 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301 (2014)
Q Consensus 1222 ~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~ 1301 (2014)
+|.+.+|.+...|+.............++++.+|+.+|.|+||.|+.+||..++..
T Consensus 285 iD~de~g~i~~~e~~~~~~~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~------------------------ 340 (450)
T 3sg6_A 285 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS------------------------ 340 (450)
T ss_dssp ESCCTTSTTTTTCBCCC---CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH------------------------
T ss_pred CCccccccchhhhhhhhhcccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH------------------------
Confidence 56666666666655321111111112256888899999999999999999888754
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHH
Q psy5584 1302 SPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIV 1381 (2014)
Q Consensus 1302 ~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~ 1381 (2014)
+|..++..+++.+|..+
T Consensus 341 ---------------------------------------------------------------lg~~~s~eel~~Lf~~~ 357 (450)
T 3sg6_A 341 ---------------------------------------------------------------LGQNPTEAELQDMINEV 357 (450)
T ss_dssp ---------------------------------------------------------------TTCCCCHHHHHHHHHTT
T ss_pred ---------------------------------------------------------------hCCCCCHHHHHHHHHHh
Confidence 34456677788999999
Q ss_pred ccCCCCceeHHHHHHHHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Q psy5584 1382 DKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1460 (2014)
Q Consensus 1382 D~DgdG~Isf~EFl~~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~ 1460 (2014)
|.|++|.|+|+||+.++.... .....++++.+|+.+|+|++|.|+.+||+.+++.++. .++++++++ +|+
T Consensus 358 D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~-----~ls~eei~~----Lf~ 428 (450)
T 3sg6_A 358 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDE----MIR 428 (450)
T ss_dssp CTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTC-----CCCHHHHHH----HHH
T ss_pred ccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCC-----CCCHHHHHH----HHH
Confidence 999999999999998887543 2355678999999999999999999999999998765 888887655 778
Q ss_pred HcCCCCCCcccHHHHHHHHHh
Q psy5584 1461 DAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1461 ~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+|.|+||.|+|+||+.+|..
T Consensus 429 ~~D~D~DG~IsfdEFv~~L~~ 449 (450)
T 3sg6_A 429 EADIDGDGQVNYEEFVQMMTA 449 (450)
T ss_dssp HHCTTSSSSEEHHHHHHHHC-
T ss_pred HhCCCCCCcEeHHHHHHHHhc
Confidence 899999999999999999863
No 105
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.56 E-value=1.4e-14 Score=163.06 Aligned_cols=101 Identities=20% Similarity=0.274 Sum_probs=81.2
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhc-------CCcHHHHH----HHHhhhcCCCCCeeeHHHHHHHHHHHHHhh
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-------GHTEDKLR----IIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1441 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-------~~~~e~l~----~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~ 1441 (2014)
.+..+|..+|.|++|.|+|+||+.++..... ....+.++ .+|+.+|+|++|.|+.+||+.+++.++.
T Consensus 67 ~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~-- 144 (195)
T 1qv0_A 67 CVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGI-- 144 (195)
T ss_dssp HHHHHHHHTTCCTTCCBCHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSS--
T ss_pred HHHHHHHHcCCCCCceEcHHHHHHHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCC--
Confidence 5888999999999999999999998766532 12223344 8999999999999999999999998765
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++++++ +|+.+|.|+||.|+|+||+.++...
T Consensus 145 ---~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~~ 178 (195)
T 1qv0_A 145 ---SPSQEDCEA----TFRHCDLDNAGDLDVDEMTRQHLGF 178 (195)
T ss_dssp ---CCCHHHHHH----HHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred ---CCCHHHHHH----HHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 788887655 7888999999999999999999753
No 106
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A
Probab=99.56 E-value=1.4e-14 Score=171.21 Aligned_cols=187 Identities=16% Similarity=0.247 Sum_probs=144.5
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCC------HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhc
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1283 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~------eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~ 1283 (2014)
.....++.+|..+|+|++|.|+.+||..++..++...+ .+.+..+|..+|.|++|.|+++||..++.....
T Consensus 13 ~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~~~--- 89 (263)
T 2f33_A 13 ITASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTEEN--- 89 (263)
T ss_dssp CCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSCTT---
T ss_pred ccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhhhh---
Confidence 34567899999999999999999999999987653333 378899999999999999999999988632100
Q ss_pred CCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHH
Q psy5584 1284 TTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS 1363 (2014)
Q Consensus 1284 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~ 1363 (2014)
.. . .+ .
T Consensus 90 -------~~-~-----------------------------~~----~--------------------------------- 95 (263)
T 2f33_A 90 -------FL-L-----------------------------LF----R--------------------------------- 95 (263)
T ss_dssp -------HH-H-----------------------------HH----G---------------------------------
T ss_pred -------HH-H-----------------------------HH----H---------------------------------
Confidence 00 0 00 0
Q ss_pred HhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH----hcCCcHHHHHH----HHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDKLRI----IFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1364 ~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~----~~~~~~e~l~~----~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
+....+...+..+|..+|.|++|.|+.+||..++..+ ....+.+++.. +|+.+|.|++|.|+.+||..++.
T Consensus 96 -~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~ 174 (263)
T 2f33_A 96 -CQQLKSCEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLP 174 (263)
T ss_dssp -GGTSSCHHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSC
T ss_pred -HhhccHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence 0012245668899999999999999999999999877 45566666665 99999999999999999998875
Q ss_pred H-------HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1436 S-------LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1436 ~-------l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
. ... . ....+. +..+|+.+|.|++|.|+.+||..++...
T Consensus 175 ~~~~~~~~~~~---~-~~~~~~----~~~~F~~~D~d~~G~is~~El~~~l~~~ 220 (263)
T 2f33_A 175 VQENFLLKFQG---I-KMCGKE----FNKAFELYDQDGNGYIDENELDALLKDL 220 (263)
T ss_dssp TTTCSHHHHHH---T-CCCHHH----HHHHHHHHCCSSSSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHhcC---c-chHHHH----HHHHHHHhCCCCCCcccHHHHHHHHHHH
Confidence 3 111 1 334444 4558999999999999999999999753
No 107
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.56 E-value=5.1e-15 Score=157.83 Aligned_cols=135 Identities=29% Similarity=0.520 Sum_probs=113.4
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|+.+|.|++|.|+.+||..++..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------------------------------------------- 35 (143)
T 3j04_B 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLAS--------------------------------------------------- 35 (143)
T ss_dssp HHHHHHHTTTCSSCTTCCCHHHHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHH---------------------------------------------------
Confidence 46788999999999999999999988765
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcH
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTE 1407 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~ 1407 (2014)
+|..++..++..++.. ++|.|+|+||+.++..... ....
T Consensus 36 ------------------------------------~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~~~ 75 (143)
T 3j04_B 36 ------------------------------------MGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTDPE 75 (143)
T ss_dssp ------------------------------------TSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSCCH
T ss_pred ------------------------------------hCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCCcH
Confidence 3445555666666554 7999999999999986543 3567
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
+.++.+|+.+|+|++|.|+.+||+.++..++. .+++++++. +|+.+|.|+||.|+|+||+.+|.+.+
T Consensus 76 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-----~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~~~~ 142 (143)
T 3j04_B 76 DVIRNAFACFDEEASGFIHEDHLRELLTTMGD-----RFTDEEVDE----MYREAPIDKKGNFNYVEFTRILKHGA 142 (143)
T ss_dssp HHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSS-----CCCHHHHHH----HHHHTTCCSSSCCCSTHHHHHHHSSC
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC-----CCCHHHHHH----HHHHcCCCCCCcCcHHHHHHHHhccC
Confidence 88999999999999999999999999997654 788887655 78889999999999999999998764
No 108
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.55 E-value=3.4e-14 Score=156.98 Aligned_cols=98 Identities=17% Similarity=0.353 Sum_probs=84.7
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhcCCc--------HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCC
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT--------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS 1445 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~--------~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ 1445 (2014)
++.+|..+|.|++|.|+++||+.++........ .+.++.+|+.+|.|++|.|+.+||+.++..+ .
T Consensus 60 ~~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~-------g 132 (176)
T 1nya_A 60 FDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL-------G 132 (176)
T ss_dssp HHHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT-------T
T ss_pred HHHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHh-------C
Confidence 568999999999999999999999988765544 3669999999999999999999999999864 3
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1446 LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1446 ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+++++++ .+|+.+|.|+||.|+|+||+.++...
T Consensus 133 ~~~~~~~----~~~~~~D~d~dg~i~~~ef~~~~~~~ 165 (176)
T 1nya_A 133 MSKAEAA----EAFNQVDTNGNGELSLDELLTAVRDF 165 (176)
T ss_dssp CCHHHHH----HHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred CCHHHHH----HHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 5676654 48888999999999999999999764
No 109
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=99.55 E-value=4.2e-14 Score=151.30 Aligned_cols=137 Identities=19% Similarity=0.395 Sum_probs=119.4
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|+|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++.....
T Consensus 6 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~------------ 73 (143)
T 2obh_A 6 QEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMS------------ 73 (143)
T ss_dssp HHHHHHHHTTCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhc------------
Confidence 56899999999999999999999999999999999999999999999999999999999988643110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
. .....
T Consensus 74 -----~---------------------------------------------------------------------~~~~~ 79 (143)
T 2obh_A 74 -----E---------------------------------------------------------------------KDTKE 79 (143)
T ss_dssp -----H---------------------------------------------------------------------HHHHH
T ss_pred -----c---------------------------------------------------------------------ccHHH
Confidence 0 00123
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|+.+|+|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 80 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~ 142 (143)
T 2obh_A 80 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142 (143)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 477889999999999999999999998877778889999999999999999999999988763
No 110
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.55 E-value=1e-14 Score=166.48 Aligned_cols=103 Identities=22% Similarity=0.453 Sum_probs=82.8
Q ss_pred HHHHHHccCCCCceeHHHHHHHHHHHhcC----------------CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH-H
Q psy5584 1376 MMFNIVDKDGDGRISFQEFLDTVVLFSRG----------------HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL-V 1438 (2014)
Q Consensus 1376 ~lf~~~D~DgdG~Isf~EFl~~l~~~~~~----------------~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l-~ 1438 (2014)
+++..+|.|++|.|+|+||+.++...... ...+.++.+|+.+|+|++|.|+.+||+.++..+ +
T Consensus 65 ~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g 144 (208)
T 2ct9_A 65 RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVG 144 (208)
T ss_dssp HHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSC
T ss_pred HHHHHHcCCCCCcCcHHHHHHHHHhhccccchhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhC
Confidence 34555566666666666666655543211 256789999999999999999999999999976 5
Q ss_pred HhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1439 EMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1439 ~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
. .+++++++++++.+|+.+|.|+||.|+|+||+.++...+
T Consensus 145 ~-----~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 184 (208)
T 2ct9_A 145 V-----NISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEKVD 184 (208)
T ss_dssp T-----TCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTTSC
T ss_pred C-----CCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 4 899999999889999999999999999999999987754
No 111
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=99.55 E-value=1.1e-13 Score=150.32 Aligned_cols=146 Identities=15% Similarity=0.274 Sum_probs=128.6
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
..++.++.. .++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..+
T Consensus 15 ~~l~~~~~~----------~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 84 (161)
T 3fwb_A 15 SELLEEQKQ----------EIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYIV 84 (161)
T ss_dssp TTSCHHHHH----------HHHHHHHHHCTTSSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHH
T ss_pred CCCCHHHHH----------HHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHH
Confidence 567777764 4899999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccc
Q psy5584 1275 LRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT 1354 (2014)
Q Consensus 1275 l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g 1354 (2014)
+.....
T Consensus 85 ~~~~~~-------------------------------------------------------------------------- 90 (161)
T 3fwb_A 85 MGEKIL-------------------------------------------------------------------------- 90 (161)
T ss_dssp HHHHHH--------------------------------------------------------------------------
T ss_pred HHHHHh--------------------------------------------------------------------------
Confidence 754210
Q ss_pred cccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH
Q psy5584 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434 (2014)
Q Consensus 1355 ~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L 1434 (2014)
.......+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++
T Consensus 91 ------------~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~ 158 (161)
T 3fwb_A 91 ------------KRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAIC 158 (161)
T ss_dssp ------------TCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHH
T ss_pred ------------cCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 01124557889999999999999999999999988877889999999999999999999999999988
Q ss_pred HH
Q psy5584 1435 RS 1436 (2014)
Q Consensus 1435 ~~ 1436 (2014)
..
T Consensus 159 ~~ 160 (161)
T 3fwb_A 159 TD 160 (161)
T ss_dssp HH
T ss_pred hc
Confidence 63
No 112
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.55 E-value=2.8e-15 Score=161.48 Aligned_cols=107 Identities=22% Similarity=0.345 Sum_probs=88.4
Q ss_pred hCCCChHHHHHHHHHHHccC--CCCceeHHHHHHHHHHHhcC---CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKD--GDGRISFQEFLDTVVLFSRG---HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~D--gdG~Isf~EFl~~l~~~~~~---~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~ 1439 (2014)
+|..++..++..+|..+|.| ++|.|+|+||+.++...... ...+.++.+|+.+|.|++|.|+.+||+.++..++.
T Consensus 39 ~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~ 118 (151)
T 1w7j_B 39 LGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE 118 (151)
T ss_dssp TTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSS
T ss_pred cCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccCCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCC
Confidence 35566777889999999999 99999999999998876432 23456888999999999999999999999997754
Q ss_pred hhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1440 ~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+.+| |+||.|+|+||+.+|..
T Consensus 119 -----~~~~~~~~~----~~~~~d-~~dg~i~~~eF~~~~~~ 150 (151)
T 1w7j_B 119 -----KMTEEEVET----VLAGHE-DSNGCINYEAFLKHILS 150 (151)
T ss_dssp -----CCCHHHHHH----HHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred -----CCCHHHHHH----HHHhcc-CCCCeEeHHHHHHHHhc
Confidence 788887655 788899 99999999999998753
No 113
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.55 E-value=4.3e-14 Score=154.34 Aligned_cols=99 Identities=19% Similarity=0.297 Sum_probs=82.7
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCc-------HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCC
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT-------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS 1445 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~-------~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ 1445 (2014)
.++.+|..+|.|++|.|+++||+.++........ .+.++.+|+.+|+|++|.|+.+||+.++..+ .
T Consensus 56 ~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~-------~ 128 (166)
T 3akb_A 56 LWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAF-------G 128 (166)
T ss_dssp HHHHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHT-------T
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh-------C
Confidence 3567789999999999999999998877543321 2348999999999999999999999999864 3
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1446 LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1446 ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+++++++. +|+.+|.|+||.|+|+||+.+|...
T Consensus 129 ~~~~~~~~----~~~~~D~d~dg~i~~~ef~~~~~~~ 161 (166)
T 3akb_A 129 VPEDLARQ----AAAALDTDGDGKVGETEIVPAFARY 161 (166)
T ss_dssp CCHHHHHH----HHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred CCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56666544 8888999999999999999999753
No 114
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.55 E-value=1.9e-14 Score=167.01 Aligned_cols=119 Identities=19% Similarity=0.459 Sum_probs=99.8
Q ss_pred CChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC----
Q psy5584 1368 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART---- 1443 (2014)
Q Consensus 1368 ~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~---- 1443 (2014)
..+...++.+|+.+|.|++|.|+++||+.++........+++++.+|+.+|+|+||.|+.+||..++..++...+.
T Consensus 98 ~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~ 177 (229)
T 3dd4_A 98 GDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYP 177 (229)
T ss_dssp SSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----
T ss_pred CCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCC
Confidence 3456678999999999999999999999999988888888999999999999999999999999999987532211
Q ss_pred ---CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhcc
Q psy5584 1444 ---TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIG 1490 (2014)
Q Consensus 1444 ---~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~ 1490 (2014)
..++++ .++.+|+.+|.|+||.|+|+||+.++.+.+..++.++
T Consensus 178 ~~~~~~~~~----~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~ 223 (229)
T 3dd4_A 178 VLKEDAPRQ----HVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQ 223 (229)
T ss_dssp ------CCT----HHHHHHHHHCSSCSSBCCHHHHHHHHHTCHHHHHHHH
T ss_pred CcchhhHHH----HHHHHHHHhcCCCCCcEeHHHHHHHHHhCHHHHHHHH
Confidence 023333 4666899999999999999999999999988776655
No 115
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=99.54 E-value=2.6e-14 Score=180.41 Aligned_cols=181 Identities=12% Similarity=0.185 Sum_probs=122.1
Q ss_pred CcccccccCCCCC--CCeEEEEEEec-------------CCccHHHHhhhccCCCCCCCCCcEEEEEC-CCCCCCCCcCC
Q psy5584 1775 AAYHSFTLTSAPH--ENFLSCHIKAQ-------------GPWTWKLRNYFDPCNFNASEDQPKIRLEG-PFGGGNQDWYK 1838 (2014)
Q Consensus 1775 ~e~HPFTIaS~p~--~~~l~l~Ir~~-------------G~~T~~L~~~~~~~~~~~~~~~~~v~IdG-PyG~~~~~~~~ 1838 (2014)
...|||||+|+|. ++.+.|+|+.+ |..|..|.+ +.. +.+|.|.| |+|.+..+...
T Consensus 208 l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~-l~~--------Gd~v~v~~~~~g~F~lp~~~ 278 (435)
T 1f20_A 208 LQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNR-IQA--------DDVVPCFVRGAPSFHLPRNP 278 (435)
T ss_dssp CCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTT-CCT--------TCEEEEEEECCTTSSCCSCT
T ss_pred CCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhh-CCC--------CCEEEEEEecCCCccCCCCC
Confidence 4789999999996 47899999864 667887754 332 34899999 67787654445
Q ss_pred CceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCC
Q psy5584 1839 FEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQF 1918 (2014)
Q Consensus 1839 ~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~ 1918 (2014)
..++||||||||||||+|+++++....... .....++.|+|++|+.++-.+|.++|+++.+.. ..+++++.+|+.
T Consensus 279 ~~piilIagGtGIAP~~s~l~~~~~~~~~~---~~~~~~~~L~~G~R~~~~d~ly~~El~~~~~~~--~~~~l~~a~Sr~ 353 (435)
T 1f20_A 279 QVPCILVGPGTGIAPFRSFWQQRQFDIQHK---GMNPCPMVLVFGCRQSKIDHIYREETLQAKNKG--VFRELYTAYSRE 353 (435)
T ss_dssp TSCEEEECCGGGGHHHHHHHHHHHHHHHHH---CCCCCCEEEEEEESCTTTSCTTHHHHHHHHHTT--SEEEEEEEESSC
T ss_pred CCCEEEEECCcCcHHHHHHHHHHHHhhhhc---cCCCCCEEEEEeecccccchhHHHHHHHHHHcC--CccEEEEEECCC
Confidence 678999999999999999999987642100 012358999999999874334789999987643 456788888885
Q ss_pred CCCCCcchhhhhhhhcccccccccccccCcccccccCCCC-HHHHHHHHHHhCCCCCeEEEEEeCChhhHHHHHHHHHhh
Q psy5584 1919 FHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPD-MSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEV 1997 (2014)
Q Consensus 1919 ~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd-~~~il~~l~~~~~~~~~v~V~vCGP~~m~~~vr~a~~~~ 1997 (2014)
.... .. |+... + +-+ ...+...+.+ ....||+|||++|+++|++++.+.
T Consensus 354 ~~~~---k~--yVq~~-l-------------------~~~l~~~~~~~l~~-----~~~~vYvCGp~~M~~~V~~~L~~i 403 (435)
T 1f20_A 354 PDRP---KK--YVQDV-L-------------------QEQLAESVYRALKE-----QGGHIYVCGDVTMAADVLKAIQRI 403 (435)
T ss_dssp TTSC---CC--CHHHH-H-------------------HHHSHHHHHHHHHT-----SCCEEEEEECHHHHHHHHHHHHHH
T ss_pred CCCC---Cc--chhhH-H-------------------HhhhHHHHHHHHhc-----CCcEEEEeCChhHHHHHHHHHHHH
Confidence 3210 00 00000 0 000 0111122211 235699999999999999998877
Q ss_pred hc
Q psy5584 1998 NK 1999 (2014)
Q Consensus 1998 ~~ 1999 (2014)
..
T Consensus 404 ~~ 405 (435)
T 1f20_A 404 MT 405 (435)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 116
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Probab=99.54 E-value=3.1e-14 Score=159.83 Aligned_cols=155 Identities=23% Similarity=0.324 Sum_probs=130.1
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcC-CCCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~-~~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
+.|+.+|+..+.. ...+..+++.+|..+|.| ++|.|+++||..++..+.. ..+++.++.+|+.+|.|++|.|+++||
T Consensus 6 ~~l~~~el~~~~~~~~~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef 85 (190)
T 2l2e_A 6 SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEF 85 (190)
T ss_dssp CCSCHHHHHHHHHHHCSCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHH
T ss_pred ccCCHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHH
Confidence 6789999886442 244778899999999999 8999999999999998754 356778999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++...
T Consensus 86 ~~~~~~~------------------------------------------------------------------------- 92 (190)
T 2l2e_A 86 ICALSVT------------------------------------------------------------------------- 92 (190)
T ss_dssp HHHHTTS-------------------------------------------------------------------------
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 9887431
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh------------cCCcHHHHHHHHhhhcC
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS------------RGHTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~------------~~~~~e~l~~~F~~~D~ 1419 (2014)
+...+...+..+|..+|.|++|.|+++||..++.... .....+.+..+|+.+|.
T Consensus 93 --------------~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 158 (190)
T 2l2e_A 93 --------------SRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDK 158 (190)
T ss_dssp --------------SCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTC
T ss_pred --------------cCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCC
Confidence 1223456688899999999999999999999987631 23567789999999999
Q ss_pred CCCCeeeHHHHHHHHHH
Q psy5584 1420 DRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~ 1436 (2014)
|++|.|+.+||..++..
T Consensus 159 d~dG~I~~~Ef~~~~~~ 175 (190)
T 2l2e_A 159 NKDGQLTLEEFCEGSKR 175 (190)
T ss_dssp CSSCCBCHHHHHHHHHT
T ss_pred CCCCcCcHHHHHHHHHh
Confidence 99999999999999873
No 117
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.54 E-value=1.5e-14 Score=153.64 Aligned_cols=132 Identities=21% Similarity=0.365 Sum_probs=111.3
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|..+|.|++|.|+.+||..++..
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~--------------------------------------------------- 33 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRA--------------------------------------------------- 33 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHH---------------------------------------------------
Confidence 46788999999999999999999988765
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC---C
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG---H 1405 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~---~ 1405 (2014)
+|..++..++..++. +++|.|+|+||+.++...... .
T Consensus 34 ------------------------------------~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~ 73 (140)
T 1ggw_A 34 ------------------------------------CGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPG 73 (140)
T ss_dssp ------------------------------------TSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSC
T ss_pred ------------------------------------cCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCcc
Confidence 344556666777765 889999999999988765432 2
Q ss_pred cHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1406 ~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
..+.++.+|+.+|+|++|.|+.+||+.+++.++. .+++++++. +|+.+|. +||.|+|+||+.+|.+
T Consensus 74 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~-----~~~~~~~~~----~~~~~d~-~dg~i~~~eF~~~~~~ 139 (140)
T 1ggw_A 74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGE-----KLSNEEMDE----LLKGVPV-KDGMVNYHDFVQMILA 139 (140)
T ss_dssp CHHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHS-----CSCHHHHHH----HHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred cHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCC-----CCCHHHHHH----HHHhccC-CCCcEeHHHHHHHHhc
Confidence 3478999999999999999999999999998876 788887655 7888999 9999999999999864
No 118
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.54 E-value=1.3e-14 Score=166.56 Aligned_cols=117 Identities=19% Similarity=0.401 Sum_probs=100.7
Q ss_pred HHHHHHHccCCCCc-eeHHHHHHHHHHHhcCC-cHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHH
Q psy5584 1375 RMMFNIVDKDGDGR-ISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVT 1452 (2014)
Q Consensus 1375 ~~lf~~~D~DgdG~-Isf~EFl~~l~~~~~~~-~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~ 1452 (2014)
+++|..+|.|++|. |+|+||+.++....... .+++++.+|+.||.|++|+|+.+||+.++..++.......+++++++
T Consensus 94 ~~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~ 173 (214)
T 2l4h_A 94 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK 173 (214)
T ss_dssp HHHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHH
T ss_pred HHHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHH
Confidence 46788899999999 99999999998776553 46689999999999999999999999999988642111267888899
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhccc
Q psy5584 1453 ELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGL 1491 (2014)
Q Consensus 1453 ~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~ 1491 (2014)
++++.+|+.+|.|+||.|+|+||+.++.+.|..++.+.+
T Consensus 174 ~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~p~~~~~l~~ 212 (214)
T 2l4h_A 174 QLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 212 (214)
T ss_dssp HHHHHHHHHHCCSCCSSBCSHHHHHHHHTCHHHHHHTSS
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHhChHHHHhccC
Confidence 889999999999999999999999999999887766554
No 119
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.54 E-value=4.6e-14 Score=154.71 Aligned_cols=104 Identities=20% Similarity=0.248 Sum_probs=86.7
Q ss_pred CChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCC
Q psy5584 1368 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1446 (2014)
Q Consensus 1368 ~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~l 1446 (2014)
.++..++..++... +|.|+|+||+.++..... ....+.++.+|+.+|.|++|.|+.+||+.++..++. .+
T Consensus 58 ~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-----~~ 128 (166)
T 2mys_B 58 NVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGG-----RF 128 (166)
T ss_pred CCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCC-----CC
Confidence 45566677777653 799999999999886543 356788999999999999999999999999998765 78
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1447 TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1447 s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
++++++. +|+.+|.|+||.|+|+||+.+|.....
T Consensus 129 ~~~~~~~----~~~~~D~d~dg~I~~~eF~~~~~~~~~ 162 (166)
T 2mys_B 129 TPEEIKN----MWAAFPPDVAGNVDYKNICYVITHGED 162 (166)
T ss_pred CHHHHHH----HHHhcCCCCCCeEeHHHHHHHHHhccc
Confidence 8887655 778899999999999999999987543
No 120
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=99.54 E-value=1.5e-13 Score=147.78 Aligned_cols=137 Identities=26% Similarity=0.393 Sum_probs=118.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++.....
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~------------ 77 (148)
T 1exr_A 10 AEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMK------------ 77 (148)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhccc------------
Confidence 34889999999999999999999999999999999999999999999999999999999988754110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
. .....
T Consensus 78 -----~---------------------------------------------------------------------~~~~~ 83 (148)
T 1exr_A 78 -----E---------------------------------------------------------------------QDSEE 83 (148)
T ss_dssp -----H---------------------------------------------------------------------HHHHH
T ss_pred -----C---------------------------------------------------------------------CCcHH
Confidence 0 00123
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++.......+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 84 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1exr_A 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 146 (148)
T ss_dssp HHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence 467789999999999999999999998877778888999999999999999999999998875
No 121
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.54 E-value=3.8e-14 Score=167.49 Aligned_cols=174 Identities=19% Similarity=0.384 Sum_probs=132.1
Q ss_pred ceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-CCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHH
Q psy5584 1229 RISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307 (2014)
Q Consensus 1229 ~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~ 1307 (2014)
.++.+++..+.... ..++++++.+|+.||.+ ++|.|+++||..++..+.
T Consensus 73 ~l~~e~l~~l~~~~--~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~---------------------------- 122 (256)
T 2jul_A 73 RHQPEGLDQLQAQT--KFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFF---------------------------- 122 (256)
T ss_dssp ---CTHHHHHHHHT--TSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHC----------------------------
T ss_pred cCCHHHHHHHHHHh--CCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHc----------------------------
Confidence 34445555555432 36778888888888875 789999999988876521
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCC
Q psy5584 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDG 1387 (2014)
Q Consensus 1308 ~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG 1387 (2014)
+...+..++..+|..+|.|++|
T Consensus 123 ----------------------------------------------------------~~~~~~~~~~~~f~~~D~d~dG 144 (256)
T 2jul_A 123 ----------------------------------------------------------PQGDATTYAHFLFNAFDADGNG 144 (256)
T ss_dssp ----------------------------------------------------------CSSCCHHHHHHHHHHSSCSCCS
T ss_pred ----------------------------------------------------------ccCCcHHHHHHHHHHhccCCCC
Confidence 1123456788999999999999
Q ss_pred ceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC---CCCHHHHHHHHHHHHHHcCC
Q psy5584 1388 RISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT---SLTDSQVTELIDGMFQDAGL 1464 (2014)
Q Consensus 1388 ~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~---~ls~~e~~~li~~if~~~D~ 1464 (2014)
.|+++||+.++..+.....+++++.+|+.+|.|++|.|+.+||..++..+....+.. .+.+...++.++.+|+.+|.
T Consensus 145 ~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 224 (256)
T 2jul_A 145 AIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDR 224 (256)
T ss_dssp EECSHHHHHHHHHHHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCC
T ss_pred cCcHHHHHHHHHHHhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCC
Confidence 999999999998887778888999999999999999999999999999875422210 11111123346679999999
Q ss_pred CCCCcccHHHHHHHHHhCcccchhcc
Q psy5584 1465 DSKDFLTYQDFKLMMRDYKGDFVAIG 1490 (2014)
Q Consensus 1465 d~dG~Is~eEF~~~l~~~~~~l~~~~ 1490 (2014)
|+||.|+|+||+.++.+.+..++.++
T Consensus 225 d~dG~Is~~Ef~~~~~~~~~l~~~l~ 250 (256)
T 2jul_A 225 NQDGVVTIDEFLETCQKDENIMNSMQ 250 (256)
T ss_dssp STTCSBCHHHHHHHHHHCSSHHHHHH
T ss_pred CCCCcEeHHHHHHHHHhCHHHHHHHH
Confidence 99999999999999999988776654
No 122
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Probab=99.53 E-value=9.7e-14 Score=155.64 Aligned_cols=155 Identities=21% Similarity=0.287 Sum_probs=131.9
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHh-cCCCCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLF-SRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l-~~~~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
..++.+++..... ...+..+++.+|..+|.+ ++|.|+.+||..++..+ ..+.+.+.++.+|+.+|.|++|.|+++||
T Consensus 6 ~~l~~~~l~~l~~~~~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef 85 (190)
T 1g8i_A 6 SKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEF 85 (190)
T ss_dssp CSCCHHHHHHHHHTSSSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHH
T ss_pred ccCCHHHHHHHHHccCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHH
Confidence 5788899888664 456889999999999998 89999999999999987 33567888999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++....
T Consensus 86 ~~~~~~~~------------------------------------------------------------------------ 93 (190)
T 1g8i_A 86 IQALSVTS------------------------------------------------------------------------ 93 (190)
T ss_dssp HHHHHHHH------------------------------------------------------------------------
T ss_pred HHHHHHhc------------------------------------------------------------------------
Confidence 99876522
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH------------hcCCcHHHHHHHHhhhcC
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~------------~~~~~~e~l~~~F~~~D~ 1419 (2014)
...+...+..+|..+|.|++|.|+++||..++..+ .....++.+..+|+.+|.
T Consensus 94 ---------------~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 158 (190)
T 1g8i_A 94 ---------------RGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDK 158 (190)
T ss_dssp ---------------HCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCS
T ss_pred ---------------CCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcC
Confidence 01234568889999999999999999999998774 123567789999999999
Q ss_pred CCCCeeeHHHHHHHHHH
Q psy5584 1420 DRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~ 1436 (2014)
|++|.|+.+||..++..
T Consensus 159 d~dG~i~~~ef~~~~~~ 175 (190)
T 1g8i_A 159 NADGKLTLQEFQEGSKA 175 (190)
T ss_dssp SCSSEEEHHHHHHHHHH
T ss_pred CCCCcEeHHHHHHHHHh
Confidence 99999999999999874
No 123
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A
Probab=99.53 E-value=4.6e-14 Score=159.84 Aligned_cols=139 Identities=23% Similarity=0.441 Sum_probs=121.8
Q ss_pred cCcCHHHHHHHh---CC-----CCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcc
Q psy5584 1195 TSLSRAEFASAL---GM-----KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266 (2014)
Q Consensus 1195 ~~Ls~~El~~~L---~~-----~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~I 1266 (2014)
|.|+.+||..+| +. ..+...++.+|..+|.|++|.|+++||..++... ++++.+|+.+|.|++|.|
T Consensus 47 G~i~~~el~~~l~~lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~I 120 (198)
T 1juo_A 47 GQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------NGWRQHFISFDTDRSGTV 120 (198)
T ss_dssp TEECHHHHHHHHHHHTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------HHHHHHHHTTCTTCCSEE
T ss_pred CcCCHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH------HHHHHHHHHhCCCCCCcC
Confidence 899999999755 44 5688999999999999999999999999998764 689999999999999999
Q ss_pred cHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCC
Q psy5584 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1346 (2014)
Q Consensus 1267 s~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~ 1346 (2014)
+.+||..++..
T Consensus 121 ~~~el~~~l~~--------------------------------------------------------------------- 131 (198)
T 1juo_A 121 DPQELQKALTT--------------------------------------------------------------------- 131 (198)
T ss_dssp CHHHHHHHHHH---------------------------------------------------------------------
T ss_pred CHHHHHHHHHH---------------------------------------------------------------------
Confidence 99999998754
Q ss_pred cccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeee
Q psy5584 1347 TGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1426 (2014)
Q Consensus 1347 ~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is 1426 (2014)
+|..++..+++.++..+ |++|.|+|+||+.++... +.+..+|+.+|+|++|.|+
T Consensus 132 ------------------~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~------~~~~~~F~~~D~d~~G~is 185 (198)
T 1juo_A 132 ------------------MGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL------RALTDSFRRRDTAQQGVVN 185 (198)
T ss_dssp ------------------TTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH------HHHHHHHHHTCTTCCSEEE
T ss_pred ------------------hCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH------HHHHHHHHHhCCCCCCeEe
Confidence 24455677788899888 899999999999998775 5689999999999999999
Q ss_pred HHHHHHHHH
Q psy5584 1427 KGELAEMLR 1435 (2014)
Q Consensus 1427 ~eEf~~~L~ 1435 (2014)
.+ +.+++.
T Consensus 186 ~~-~~~~l~ 193 (198)
T 1juo_A 186 FP-YDDFIQ 193 (198)
T ss_dssp EE-HHHHHH
T ss_pred ec-HHHHHH
Confidence 97 777665
No 124
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A
Probab=99.53 E-value=9.1e-14 Score=155.83 Aligned_cols=155 Identities=23% Similarity=0.335 Sum_probs=131.8
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcC-CCCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~-~~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
+.|+.+++..+.. ...+.++++.+|..+|.+ ++|.|+++||..++..+.. ..+.+.++.+|+.+|.|++|.|+++||
T Consensus 6 ~~l~~~~l~~l~~~~~~~~~~i~~~~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef 85 (190)
T 1fpw_A 6 SKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEF 85 (190)
T ss_dssp CCSTTHHHHHHTTTCCSTHHHHHHHHHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHH
T ss_pred CCCCHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHH
Confidence 5688899988774 467889999999999998 8999999999999998743 456778999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++...
T Consensus 86 ~~~~~~~------------------------------------------------------------------------- 92 (190)
T 1fpw_A 86 ITVLSTT------------------------------------------------------------------------- 92 (190)
T ss_dssp HHHHHHH-------------------------------------------------------------------------
T ss_pred HHHHHHH-------------------------------------------------------------------------
Confidence 9987542
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc------------CCcHHHHHHHHhhhcC
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR------------GHTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~------------~~~~e~l~~~F~~~D~ 1419 (2014)
+...+...+..+|..+|.|++|.|+++||..++..... ...++.+..+|+.+|.
T Consensus 93 --------------~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 158 (190)
T 1fpw_A 93 --------------SRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDK 158 (190)
T ss_dssp --------------SCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTT
T ss_pred --------------ccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCC
Confidence 12234456888999999999999999999999887421 2556789999999999
Q ss_pred CCCCeeeHHHHHHHHHH
Q psy5584 1420 DRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~ 1436 (2014)
|++|.|+.+||..++..
T Consensus 159 d~dG~I~~~Ef~~~~~~ 175 (190)
T 1fpw_A 159 NEDGYITLDEFREGSKV 175 (190)
T ss_dssp TCSSEEEHHHHHHHHHS
T ss_pred CCCCcCcHHHHHHHHHh
Confidence 99999999999999873
No 125
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.53 E-value=4.6e-14 Score=152.97 Aligned_cols=105 Identities=17% Similarity=0.339 Sum_probs=86.9
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
|..++..++..++. +++|.|+|+||+.++.... .....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 48 g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~----- 118 (156)
T 1wdc_B 48 GRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD----- 118 (156)
T ss_dssp SSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSS-----
T ss_pred CCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCC-----
Confidence 44455666666663 5789999999999988653 3456788999999999999999999999999997654
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
.+++++++. +|+.+|.| ||.|+|+||+.+|.....
T Consensus 119 ~~~~~~~~~----~~~~~d~~-dg~i~~~eF~~~~~~~~~ 153 (156)
T 1wdc_B 119 NFNKDEMRM----TFKEAPVE-GGKFDYVKFTAMIKGSGE 153 (156)
T ss_dssp CCCHHHHHH----HHHHCCEE-TTEECHHHHHHHHHTSCC
T ss_pred CCCHHHHHH----HHHhcCCC-CCEEeHHHHHHHHhcCcc
Confidence 788887655 78889999 999999999999987643
No 126
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Probab=99.53 E-value=8.1e-15 Score=178.67 Aligned_cols=201 Identities=16% Similarity=0.257 Sum_probs=159.5
Q ss_pred hhcCHHHHHHHHHHHHHHHHhhhcCCCCCCcCCCCccccccccccCcCHHHHHHHh---CCCCcHHHHHHHHHhhcCCCC
Q psy5584 1151 KAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGD 1227 (2014)
Q Consensus 1151 ~~L~~~~~~r~L~h~~~~~F~~~~d~d~~~~~~~~~~~~~~~l~~~Ls~~El~~~L---~~~~~~~~l~~lF~~~D~dgd 1227 (2014)
..|+.++... +.++|. .+|.|++ |.|+.+||..+| |...+...+..+|..+|.|++
T Consensus 114 ~~Ls~~e~~~-----l~~~F~-~~D~d~d---------------G~Is~~El~~~L~~lg~~~~~~~i~~l~~~~D~d~~ 172 (323)
T 1ij5_A 114 PMLSEEDTNI-----LRQLFL-SSAVSGS---------------GKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTK 172 (323)
T ss_dssp CCCCHHHHHH-----HHHHHT-SSSSTTS---------------SCCCHHHHHHHHHHHHTTSCSSHHHHHHHHHHHCCS
T ss_pred HhCCHHHHHH-----HHHHHH-HHhCCCC---------------CCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCC
Confidence 3566666665 566776 4787766 899999999755 677788889999999999999
Q ss_pred cceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHH-HHHhhhcChHHH
Q psy5584 1228 GRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE-LIDGMFQSPREL 1306 (2014)
Q Consensus 1228 G~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~-~i~~~~~~~~~~ 1306 (2014)
|.|++.||..++. ..+.++.+|..+|.|++|.|+.+||..++ ++ ..++..++.. ++..
T Consensus 173 G~I~f~ef~~l~~------~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g-----~~~~~~ei~~~l~~~-------- 231 (323)
T 1ij5_A 173 GRMSYITLVAVAN------DLAALVADFRKIDTNSNGTLSRKEFREHF--VR-----LGFDKKSVQDALFRY-------- 231 (323)
T ss_dssp STHHHHHHTTSHH------HHHTSCCCHHHHCTTCCSEECHHHHHHHH--HH-----TTCCCHHHHHHHHHH--------
T ss_pred CcCcHHHHHhhhh------HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cC-----CCCCHHHHHHHHHHH--------
Confidence 9999999987542 23456778999999999999999999998 22 3445555555 4433
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCC
Q psy5584 1307 MLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGD 1386 (2014)
Q Consensus 1307 ~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~Dgd 1386 (2014)
.|.++ +|.|+.+||...+... ..+..+|..+|.|++
T Consensus 232 -----------------------------------~D~d~------dG~Is~~EF~~~l~~~---~~l~~~F~~~D~d~d 267 (323)
T 1ij5_A 232 -----------------------------------ADEDE------SDDVGFSEYVHLGLCL---LVLRILYAFADFDKS 267 (323)
T ss_dssp -----------------------------------HCTTC------SSCEEHHHHHHHHHHH---HHHHHHHHHTCSSSC
T ss_pred -----------------------------------hcCCC------CCEEeHHHHHHHHHHH---HHHHHHHHHhCCCCC
Confidence 12333 4589999999876322 168999999999999
Q ss_pred CceeHHHHHHHH-HHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1387 GRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1387 G~Isf~EFl~~l-~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
|.|+.+||..++ ..+....+++.+..+|+.+|.|+||.|+.+||..++..+
T Consensus 268 G~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~ 319 (323)
T 1ij5_A 268 GQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLM 319 (323)
T ss_dssp SSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 999999999999 666544667789999999999999999999999998764
No 127
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.53 E-value=3.4e-14 Score=158.56 Aligned_cols=117 Identities=20% Similarity=0.408 Sum_probs=97.9
Q ss_pred HHHHHHHccCCCCc-eeHHHHHHHHHHHhcCCc-HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHH
Q psy5584 1375 RMMFNIVDKDGDGR-ISFQEFLDTVVLFSRGHT-EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVT 1452 (2014)
Q Consensus 1375 ~~lf~~~D~DgdG~-Isf~EFl~~l~~~~~~~~-~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~ 1452 (2014)
.+++..+|.|++|. |+|+||+.++........ +++++.+|+.+|+|++|.|+.+||+.++..++.......+++++++
T Consensus 63 ~~l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~ 142 (183)
T 1dgu_A 63 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK 142 (183)
T ss_dssp HHHHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHH
T ss_pred HHHHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHH
Confidence 35788899999999 999999999987765533 5689999999999999999999999999987531000136778888
Q ss_pred HHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhccc
Q psy5584 1453 ELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGL 1491 (2014)
Q Consensus 1453 ~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~ 1491 (2014)
++++.+|+.+|.|+||.|+|+||+.++...+..++.+.+
T Consensus 143 ~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~~ 181 (183)
T 1dgu_A 143 QLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSFKI 181 (183)
T ss_dssp HHHHHHHHHHCTTSSSEEEHHHHHHHHCSSCHHHHCCCC
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHhChHHHHhcCC
Confidence 888889999999999999999999999998877765543
No 128
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A
Probab=99.53 E-value=4.6e-14 Score=156.62 Aligned_cols=140 Identities=26% Similarity=0.400 Sum_probs=120.4
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
...++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++......
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~---------- 79 (179)
T 2f2o_A 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKD---------- 79 (179)
T ss_dssp HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccC----------
Confidence 3568999999999999999999999999999999999999999999999999999999999887542100
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
....
T Consensus 80 ----------------------------------------------------------------------------~~~~ 83 (179)
T 2f2o_A 80 ----------------------------------------------------------------------------TDSE 83 (179)
T ss_dssp ----------------------------------------------------------------------------HHHH
T ss_pred ----------------------------------------------------------------------------cccH
Confidence 0012
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
..+..+|..+|.|++|.|+.+||..++.......+++++..+|+.+|.|++|.|+.+||..++...
T Consensus 84 ~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 149 (179)
T 2f2o_A 84 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAK 149 (179)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC-
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHc
Confidence 347788999999999999999999999887777888899999999999999999999999998754
No 129
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=99.53 E-value=8.6e-14 Score=148.67 Aligned_cols=136 Identities=21% Similarity=0.319 Sum_probs=119.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++......
T Consensus 11 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~----------- 79 (147)
T 4ds7_A 11 AEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC----------- 79 (147)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT-----------
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC-----------
Confidence 348899999999999999999999999999999999999999999999999999999999987542100
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.....
T Consensus 80 ---------------------------------------------------------------------------~~~~~ 84 (147)
T 4ds7_A 80 ---------------------------------------------------------------------------NDSEQ 84 (147)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred ---------------------------------------------------------------------------CCcHH
Confidence 01223
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+| |++|.|+.+||..+++
T Consensus 85 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~ 146 (147)
T 4ds7_A 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146 (147)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred HHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHh
Confidence 5778899999999999999999999998877788899999999999 9999999999998764
No 130
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.53 E-value=1.2e-14 Score=164.65 Aligned_cols=118 Identities=25% Similarity=0.471 Sum_probs=98.4
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC-CCCCHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART-TSLTDSQ 1450 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~-~~ls~~e 1450 (2014)
..++.+|..+|.|++|.|+++||+.++..+......++++.+|+.+|.|++|.|+.+||..++..++..... ..++.++
T Consensus 52 ~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~ 131 (198)
T 2r2i_A 52 KYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEE 131 (198)
T ss_dssp HHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHH
T ss_pred HHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHH
Confidence 458899999999999999999999999988777788899999999999999999999999999876421100 1455443
Q ss_pred HHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhcccc
Q psy5584 1451 VTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGLD 1492 (2014)
Q Consensus 1451 ~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~~ 1492 (2014)
.+..+|+.+|.|+||.|+|+||+.++...+...+.+...
T Consensus 132 ---~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~ 170 (198)
T 2r2i_A 132 ---FTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRS 170 (198)
T ss_dssp ---HHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHHHHHHST
T ss_pred ---HHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHHHHHhcc
Confidence 356689999999999999999999999888777666543
No 131
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.53 E-value=4e-15 Score=167.21 Aligned_cols=108 Identities=26% Similarity=0.469 Sum_probs=91.4
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCC
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS 1445 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ 1445 (2014)
|..++..++..+|..+|.|++|.|+|+||+.++..+......+.++.+|+.+|+|++|.|+.+||+.++..+ .
T Consensus 40 g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~-------g 112 (188)
T 1s6i_A 40 GSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDF-------G 112 (188)
T ss_dssp TCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCSTHHHHHHTTTTCSSEEEHHHHHHTTTTT-------T
T ss_pred CCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-------C
Confidence 455667789999999999999999999999988765444555679999999999999999999999999753 3
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1446 LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1446 ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
++++++ +.+|+.+|.|+||.|+|+||+.+|.+.++
T Consensus 113 ~~~~~~----~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 147 (188)
T 1s6i_A 113 LDDIHI----DDMIKEIDQDNDGQIDYGEFAAMMRKRKG 147 (188)
T ss_dssp CCTTHH----HHHHHHHCSSSSSEEETTHHHHTTSCCCS
T ss_pred CCHHHH----HHHHHHHCCCCCCcEeHHHHHHHHHHcCC
Confidence 565554 45888999999999999999999987664
No 132
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Probab=99.53 E-value=1.4e-13 Score=151.20 Aligned_cols=138 Identities=20% Similarity=0.367 Sum_probs=121.5
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|..+|.|++|.|+++||..++......
T Consensus 28 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~----------- 96 (169)
T 3qrx_A 28 QEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGE----------- 96 (169)
T ss_dssp HHHHHHHHHHCTTCCSEECHHHHHHHHHHTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcc-----------
Confidence 458999999999999999999999999999999999999999999999999999999999987542100
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.....
T Consensus 97 ---------------------------------------------------------------------------~~~~~ 101 (169)
T 3qrx_A 97 ---------------------------------------------------------------------------RDSRE 101 (169)
T ss_dssp ---------------------------------------------------------------------------HHHHH
T ss_pred ---------------------------------------------------------------------------cCcHH
Confidence 00123
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..+++.
T Consensus 102 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 165 (169)
T 3qrx_A 102 EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK 165 (169)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence 4778899999999999999999999998877788899999999999999999999999999864
No 133
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.53 E-value=5.2e-14 Score=158.05 Aligned_cols=98 Identities=18% Similarity=0.304 Sum_probs=81.7
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhc---------CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSR---------GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~---------~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
++.++..+|.|++|.|+++||+.++..... ....+.++.+|+.+|+|++|.|+.+||+.+++.+
T Consensus 66 ~~~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~------- 138 (191)
T 2ccm_A 66 WDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSY------- 138 (191)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTT-------
T ss_pred HHHHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-------
Confidence 455669999999999999999998877532 1234679999999999999999999999999754
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.+++++++ .+|+.+|.|+||.|+|+||+.++...
T Consensus 139 g~~~~~~~----~~~~~~D~d~dG~i~~~Ef~~~~~~~ 172 (191)
T 2ccm_A 139 GIPKSDCD----AAFDTLSDGGKTMVTREIFARLWTEY 172 (191)
T ss_dssp TCCHHHHH----HHHHHHTTTTTSCCBHHHHHHHHHHH
T ss_pred CCCHHHHH----HHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 35666654 48889999999999999999999753
No 134
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.53 E-value=4.2e-14 Score=160.56 Aligned_cols=156 Identities=16% Similarity=0.291 Sum_probs=128.0
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|+|++|.|+.+||..++..++...++++++.+|+.+|.|++|.|+++||..++....
T Consensus 37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~------------- 103 (204)
T 3e3r_A 37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPM------------- 103 (204)
T ss_dssp ---CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCC-------------
T ss_pred HHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhc-------------
Confidence 5688999999999999999999999999999999999999999999999999999999998763210
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
......
T Consensus 104 --------------------------------------------------------------------------~~~~~~ 109 (204)
T 3e3r_A 104 --------------------------------------------------------------------------SQAREA 109 (204)
T ss_dssp --------------------------------------------------------------------------CHHHHH
T ss_pred --------------------------------------------------------------------------CchHHH
Confidence 001234
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHH-------HhcCCcHHHHHHHHhhhcC-CCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVL-------FSRGHTEDKLRIIFDMCDN-DRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~-------~~~~~~~e~l~~~F~~~D~-DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
.+..+|..+|.|++|.|+.+||..++.. ......++.+..+|+.+|. |+||.|+.+||..++..++..
T Consensus 110 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~~---- 185 (204)
T 3e3r_A 110 VIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSAS---- 185 (204)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCcc----
Confidence 5888999999999999999999998863 2334566789999999998 999999999999999987741
Q ss_pred CCCHHHHHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMF 1459 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if 1459 (2014)
..++++++.++...+
T Consensus 186 ~~~d~~f~~~~~~~w 200 (204)
T 3e3r_A 186 MNTDEEFVAMMTSAW 200 (204)
T ss_dssp CSSHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHhC
Confidence 446677777665544
No 135
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.53 E-value=1.1e-14 Score=166.80 Aligned_cols=117 Identities=26% Similarity=0.426 Sum_probs=98.2
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1451 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~ 1451 (2014)
.+++.+|..+|.|++|.|+++||+.++..+......++++.+|+.+|.|++|.|+.+||..++..++.......++.++
T Consensus 57 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~- 135 (211)
T 2ggz_A 57 KHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEE- 135 (211)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHH-
T ss_pred HHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHH-
Confidence 4588999999999999999999999998887777788999999999999999999999999998764210000445443
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhccc
Q psy5584 1452 TELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGL 1491 (2014)
Q Consensus 1452 ~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~~ 1491 (2014)
.++.+|+.+|.|+||.|+|+||+.++...+...+.+..
T Consensus 136 --~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~ 173 (211)
T 2ggz_A 136 --FINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK 173 (211)
T ss_dssp --HHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHHHHH
T ss_pred --HHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHHHhc
Confidence 35668999999999999999999999998887777664
No 136
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Probab=99.52 E-value=8.5e-14 Score=151.41 Aligned_cols=149 Identities=22% Similarity=0.337 Sum_probs=125.3
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCC-CcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDG-DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dg-dG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~ 1273 (2014)
..++.++.. .++.+|..+|.|+ +|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..
T Consensus 10 ~~l~~~~~~----------~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~ 79 (161)
T 1dtl_A 10 EQLTEEQKN----------EFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLV 79 (161)
T ss_dssp GGSCHHHHH----------HHHHHHHHHTTTCGGGSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHH
T ss_pred hhCCHHHHH----------HHHHHHHHHcCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 456666654 4889999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccccc
Q psy5584 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMR 1353 (2014)
Q Consensus 1274 ~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~ 1353 (2014)
++.......
T Consensus 80 ~~~~~~~~~----------------------------------------------------------------------- 88 (161)
T 1dtl_A 80 MMVRSMKDD----------------------------------------------------------------------- 88 (161)
T ss_dssp HHHHHHC-------------------------------------------------------------------------
T ss_pred HHHHHhccc-----------------------------------------------------------------------
Confidence 876522000
Q ss_pred ccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHH
Q psy5584 1354 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433 (2014)
Q Consensus 1354 g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~ 1433 (2014)
........+..+|..+|.|++|.|+.+||..++..+....+++.+..+|+.+|.|++|.|+.+||..+
T Consensus 89 ------------~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~ 156 (161)
T 1dtl_A 89 ------------SKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEF 156 (161)
T ss_dssp ---------------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHH
T ss_pred ------------ccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 00123455889999999999999999999998877666678889999999999999999999999998
Q ss_pred HHH
Q psy5584 1434 LRS 1436 (2014)
Q Consensus 1434 L~~ 1436 (2014)
+..
T Consensus 157 ~~~ 159 (161)
T 1dtl_A 157 MKG 159 (161)
T ss_dssp HHC
T ss_pred HHc
Confidence 863
No 137
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Probab=99.52 E-value=1.1e-14 Score=165.33 Aligned_cols=143 Identities=17% Similarity=0.252 Sum_probs=114.8
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|+.+|.|++|.|+.+||..++..
T Consensus 37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~--------------------------------------------------- 65 (204)
T 3e3r_A 37 QGLARFFRQLDRDGSRSLDADEFRQGLAK--------------------------------------------------- 65 (204)
T ss_dssp ---CHHHHHHCTTCCSSBCHHHHHHHHHT---------------------------------------------------
T ss_pred HHHHHHHHHHccCCCCCcCHHHHHHHHHH---------------------------------------------------
Confidence 56889999999999999999999998754
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHH
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTED 1408 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e 1408 (2014)
+|..++..+++.+|..+|.|++|.|+|+||+.++.........+
T Consensus 66 ------------------------------------~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~ 109 (204)
T 3e3r_A 66 ------------------------------------LGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREA 109 (204)
T ss_dssp ------------------------------------TTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHH
T ss_pred ------------------------------------cCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHH
Confidence 34566778899999999999999999999999876543334556
Q ss_pred HHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH---hhcCCCCCHHHHHHHHHHHHHHcCC-CCCCcccHHHHHHHHHhCc
Q psy5584 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVE---MARTTSLTDSQVTELIDGMFQDAGL-DSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1409 ~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~---~~~~~~ls~~e~~~li~~if~~~D~-d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.++.+|+.+|.|++|.|+.+||..++..++. ..+. .+++++ ++.+|+.+|. |+||.|+|+||+.++....
T Consensus 110 ~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~-~~~~~~----~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~ 183 (204)
T 3e3r_A 110 VIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGE-WTEDEV----LRRFLDNFDSSEKDGQVTLAEFQDYYSGVS 183 (204)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTS-SCHHHH----HHHHHHHHSCSSCCSCEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCC-CChHHH----HHHHHHHhhccCCCCcCcHHHHHHHHHHcC
Confidence 8999999999999999999999999974311 0111 334444 5558899998 9999999999999998754
No 138
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.51 E-value=1.3e-14 Score=158.77 Aligned_cols=106 Identities=24% Similarity=0.418 Sum_probs=79.7
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCC
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS 1445 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ 1445 (2014)
|..++..++..+|..+|.|++|.|+++||+..+.........+.++.+|+.+|.|++|.|+.+||+.++..++
T Consensus 57 ~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~------- 129 (166)
T 2aao_A 57 GANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG------- 129 (166)
T ss_dssp TCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHHHHHHHHHHCTTCSSSBCHHHHHHHTCC---------
T ss_pred CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC-------
Confidence 3455666778888888888888888888887775433333456799999999999999999999999998553
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1446 LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1446 ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+++++ ++.+|+.+|.|+||.|+|+||+.++.+.
T Consensus 130 ~~~~~----~~~~~~~~d~~~dg~i~~~eF~~~~~~~ 162 (166)
T 2aao_A 130 VEDVR----IEELMRDVDQDNDGRIDYNEFVAMMQKG 162 (166)
T ss_dssp ----------CCHHHHHCTTCSSSBCHHHHHHHHC--
T ss_pred CCHHH----HHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 34444 4558889999999999999999998764
No 139
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E
Probab=99.51 E-value=9e-14 Score=154.96 Aligned_cols=151 Identities=15% Similarity=0.272 Sum_probs=121.4
Q ss_pred CHHHHHHHhC-CCCcHHHHHHHHHhhcC-CCCcceeHHHHHHHHHHhcCC-CCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1198 SRAEFASALG-MKSDAVFVRMMFNIVDK-DGDGRISFQEFLDTVVLFSRG-HTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1198 s~~El~~~L~-~~~~~~~l~~lF~~~D~-dgdG~Is~~EF~~~l~~l~~~-~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
+.+|+.+.+. ...+..+++.+|..||. |++|.|+++||..++..++.. .++++++.+|+.+|.|++|.|+++||..+
T Consensus 2 ~~~el~~l~~~~~~s~~~i~~l~~~fd~~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~ 81 (183)
T 1s6c_A 2 RPEGLEQLEAQTNFTKRELQVLYRGFKNEXPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTA 81 (183)
T ss_dssp ----CHHHHHHSSCCHHHHHHHHHHHHHHCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHH
T ss_pred ChHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence 3444444331 23477788889999998 899999999999999998754 78999999999999999999999999998
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccc
Q psy5584 1275 LRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT 1354 (2014)
Q Consensus 1275 l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g 1354 (2014)
+....
T Consensus 82 ~~~~~--------------------------------------------------------------------------- 86 (183)
T 1s6c_A 82 LSILL--------------------------------------------------------------------------- 86 (183)
T ss_dssp HHHHH---------------------------------------------------------------------------
T ss_pred HHHHc---------------------------------------------------------------------------
Confidence 86522
Q ss_pred cccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh----c--------CCcHHHHHHHHhhhcCCCC
Q psy5584 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS----R--------GHTEDKLRIIFDMCDNDRN 1422 (2014)
Q Consensus 1355 ~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~----~--------~~~~e~l~~~F~~~D~Dgd 1422 (2014)
...+...+..+|..+|.|++|.|+++||..++..+. . ....+.+..+|+.+|.|++
T Consensus 87 ------------~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~d 154 (183)
T 1s6c_A 87 ------------RGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKD 154 (183)
T ss_dssp ------------HCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCS
T ss_pred ------------CCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCC
Confidence 012345688899999999999999999999987752 1 1124789999999999999
Q ss_pred CeeeHHHHHHHHH
Q psy5584 1423 GVIDKGELAEMLR 1435 (2014)
Q Consensus 1423 G~Is~eEf~~~L~ 1435 (2014)
|.|+.+||..++.
T Consensus 155 G~i~~~Ef~~~~~ 167 (183)
T 1s6c_A 155 GIVTLDEFLESXQ 167 (183)
T ss_dssp SEECHHHHHHHTT
T ss_pred CcEeHHHHHHHHh
Confidence 9999999999886
No 140
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}
Probab=99.51 E-value=2e-14 Score=164.54 Aligned_cols=164 Identities=15% Similarity=0.300 Sum_probs=126.0
Q ss_pred cHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcCCCC-HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCC
Q psy5584 1211 DAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSRGHT-EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1288 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~~~~-eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s 1288 (2014)
+.++++.+|..+|.+ ++|.|+.+||..++..++.... .++++.+|+.+|.|++|.|+++||..++....
T Consensus 17 s~~ei~~~f~~fD~~~~~G~is~~El~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~--------- 87 (211)
T 2ggz_A 17 PTQETHVWYRTFMMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIM--------- 87 (211)
T ss_dssp -------CCCSHHHHCTTSEEEHHHHHHHTTCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHS---------
T ss_pred CHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhc---------
Confidence 445677889999998 8999999999999987665433 45699999999999999999999999875421
Q ss_pred HHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCC
Q psy5584 1289 DSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMK 1368 (2014)
Q Consensus 1289 ~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~ 1368 (2014)
..
T Consensus 88 ------------------------------------------------------------------------------~~ 89 (211)
T 2ggz_A 88 ------------------------------------------------------------------------------QE 89 (211)
T ss_dssp ------------------------------------------------------------------------------CS
T ss_pred ------------------------------------------------------------------------------cC
Confidence 12
Q ss_pred ChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh-----cC-CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhc
Q psy5584 1369 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-----RG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1442 (2014)
Q Consensus 1369 ~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-----~~-~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~ 1442 (2014)
.....+..+|..+|.|++|.|+++||..++.... .. ..++.+..+|+.+|.|++|.|+.+||..++..
T Consensus 90 ~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~------ 163 (211)
T 2ggz_A 90 KMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK------ 163 (211)
T ss_dssp SHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT------
T ss_pred chHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh------
Confidence 3445688899999999999999999999998874 22 33456999999999999999999999999873
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1443 TTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1443 ~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.+++.+ +|.. .++|+||+.+|....
T Consensus 164 -----~~~~~~----~~~~-------~~d~~~f~~~~~~~~ 188 (211)
T 2ggz_A 164 -----DQDLLE----IVYK-------SFDFSNVLRVICNGK 188 (211)
T ss_dssp -----TTTTHH----HHHH-------HSCTTHHHHHHHHHC
T ss_pred -----CHHHHH----HHhc-------cCCHHHHHHHHhcCC
Confidence 122333 3432 355899999998754
No 141
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Probab=99.51 E-value=1.3e-13 Score=148.24 Aligned_cols=149 Identities=22% Similarity=0.273 Sum_probs=125.4
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
..++.++++ .++++|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..+
T Consensus 3 ~~l~~~~~~----------~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~ 72 (153)
T 3ox6_A 3 RSLRPEEIE----------ELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72 (153)
T ss_dssp SCCCHHHHH----------HHHHHHHHHHHHCSSSCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHH
T ss_pred ccCCHHHHH----------HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHH
Confidence 456666664 4889999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccc
Q psy5584 1275 LRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT 1354 (2014)
Q Consensus 1275 l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g 1354 (2014)
+....... ..
T Consensus 73 ~~~~~~~~-----~~----------------------------------------------------------------- 82 (153)
T 3ox6_A 73 MGPKLLAE-----TA----------------------------------------------------------------- 82 (153)
T ss_dssp HHHHHTTC-----CH-----------------------------------------------------------------
T ss_pred HHHHhhcc-----cc-----------------------------------------------------------------
Confidence 75422000 00
Q ss_pred cccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHH-HhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHH
Q psy5584 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433 (2014)
Q Consensus 1355 ~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~-~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~ 1433 (2014)
. ......+..+|..+|.|++|.|+.+||..++.. .....+++++..+|+.+|.|++|.|+.+||..+
T Consensus 83 ----~--------~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~ 150 (153)
T 3ox6_A 83 ----D--------MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150 (153)
T ss_dssp ----H--------HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHH
T ss_pred ----c--------cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence 0 001345788999999999999999999999988 666788889999999999999999999999987
Q ss_pred HH
Q psy5584 1434 LR 1435 (2014)
Q Consensus 1434 L~ 1435 (2014)
++
T Consensus 151 ~~ 152 (153)
T 3ox6_A 151 MS 152 (153)
T ss_dssp TC
T ss_pred Hh
Confidence 63
No 142
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.51 E-value=1.3e-13 Score=146.70 Aligned_cols=136 Identities=15% Similarity=0.262 Sum_probs=120.3
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
...++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++....
T Consensus 5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~------------ 72 (142)
T 2bl0_C 5 VSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRM------------ 72 (142)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHh------------
Confidence 35689999999999999999999999999999999999999999999999999999999999875411
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
......
T Consensus 73 --------------------------------------------------------------------------~~~~~~ 78 (142)
T 2bl0_C 73 --------------------------------------------------------------------------KQTTSE 78 (142)
T ss_dssp --------------------------------------------------------------------------TTCCCH
T ss_pred --------------------------------------------------------------------------cCCChH
Confidence 001234
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L 1434 (2014)
..+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+| |++|.|+.+||..++
T Consensus 79 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~ 140 (142)
T 2bl0_C 79 DILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTM 140 (142)
T ss_dssp HHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTT
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHH
Confidence 56889999999999999999999999988776788899999999999 999999999998765
No 143
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.51 E-value=2.8e-14 Score=149.61 Aligned_cols=101 Identities=17% Similarity=0.361 Sum_probs=83.1
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH---hcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhc
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF---SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1442 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~---~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~ 1442 (2014)
|..++..++..+|..+|.|++|.|+++||+.++..+ ......++++.+|+.+|.|++|.|+.+||+.++..++.
T Consensus 30 ~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~--- 106 (134)
T 1jfj_A 30 RAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI--- 106 (134)
T ss_dssp CCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTTTTC---
T ss_pred CCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHHHHHHHHHHHCCCCCCccCHHHHHHHHHHhCH---
Confidence 345667789999999999999999999999987421 11123456999999999999999999999999985432
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy5584 1443 TTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1443 ~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l 1479 (2014)
.. +..+|+.+|.|+||.|+|+||+.+|
T Consensus 107 ------~~----~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 107 ------EK----VAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp ------HH----HHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred ------HH----HHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 11 6678999999999999999999876
No 144
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.8e-14 Score=158.45 Aligned_cols=136 Identities=21% Similarity=0.311 Sum_probs=117.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
.+++++|..+|+|++|.|+.+||..++..++...++.++..++..+|.|++|.|++.||..++....
T Consensus 11 ~elk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~------------- 77 (176)
T 2lhi_A 11 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQL------------- 77 (176)
T ss_dssp GHHHHHHHTTCSSCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSC-------------
T ss_pred HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhc-------------
Confidence 4589999999999999999999999999999999999999999999999999999999988763210
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
....+.+
T Consensus 78 -------------------------------------------------------------------------~~~~~~~ 84 (176)
T 2lhi_A 78 -------------------------------------------------------------------------KSNDSEQ 84 (176)
T ss_dssp -------------------------------------------------------------------------CSSHHHH
T ss_pred -------------------------------------------------------------------------ccCCcHH
Confidence 0011234
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+...|+.+|+|++|.|+.+||..++..+....+++++..+|+.+| |+||.|+.+||.++|+
T Consensus 85 ~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~ 146 (176)
T 2lhi_A 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLS 146 (176)
T ss_dssp HHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHT
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHH
Confidence 5788899999999999999999999888777788888999999999 9999999999999886
No 145
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.50 E-value=2.3e-14 Score=154.86 Aligned_cols=106 Identities=22% Similarity=0.359 Sum_probs=89.3
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..++..+ +|.|+|+||+.++.... .....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 45 ~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~---- 116 (153)
T 2ovk_B 45 LGRVPPDDELNAMLKEC----PGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGD---- 116 (153)
T ss_dssp TTSCCCHHHHHHHHHHS----SSCCCSHHHHHTTTTTTTTCCCTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSS----
T ss_pred hCCCCCHHHHHHHHHHc----CCCCCHHHHHHHHHHHhccCChHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCC----
Confidence 34556777788888776 89999999999887543 2345678999999999999999999999999998765
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
.+++++++. +|+.+|. +||.|+|+||+.+|...+.
T Consensus 117 -~~~~~~~~~----~~~~~d~-~dg~I~~~eF~~~~~~~~~ 151 (153)
T 2ovk_B 117 -NFSKEEIKN----VWKDAPL-KNKQFNYNKMVDIKGKAED 151 (153)
T ss_dssp -CCCHHHHHH----HHHHCCE-ETTEECHHHHHHHHHCSCC
T ss_pred -CCCHHHHHH----HHHHcCC-CCCEEeHHHHHHHHhcCcc
Confidence 789888655 7888999 9999999999999998764
No 146
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.50 E-value=4.4e-15 Score=171.15 Aligned_cols=91 Identities=18% Similarity=0.289 Sum_probs=76.4
Q ss_pred CCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC
Q psy5584 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG 1463 (2014)
Q Consensus 1384 DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D 1463 (2014)
|++|.|+|.||+.++.........+.++.+|+.+|+|++|+|+.+||+.++..++.. .++++++ +.+|+.+|
T Consensus 106 d~~g~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~----~~~~~e~----~~l~~~~D 177 (219)
T 3cs1_A 106 ENKGSEDFVEFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAW----GAKVEDP----AALFKELD 177 (219)
T ss_dssp HTSCCCSSBCHHHHHHHHHHHHHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHH----TCCCSCH----HHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHHHhccchHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhccc----CCCHHHH----HHHHHHhC
Confidence 789999999999987655433456789999999999999999999999999987641 4566654 44888899
Q ss_pred CCCCCcccHHHHHHHHHhC
Q psy5584 1464 LDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1464 ~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.|+||.|+|+||+.+|...
T Consensus 178 ~d~dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 178 KNGTGSVTFDEFAAWASAV 196 (219)
T ss_dssp TTSSSEEEHHHHHHHHHHH
T ss_pred CCCCCcEeHHHHHHHHHHh
Confidence 9999999999999999864
No 147
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.50 E-value=4.8e-14 Score=157.11 Aligned_cols=99 Identities=19% Similarity=0.386 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1450 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e 1450 (2014)
..++..+|..+|.|++|.|+|+||+..+..... ..++.++.+|+.+|+|++|.|+.+||+.+++ +. .+++++
T Consensus 72 ~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~-~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~--~~-----~~~~~~ 143 (180)
T 3mse_B 72 KWDINRILQALDINDRGNITYTEFMAGCYRWKN-IESTFLKAAFNKIDKDEDGYISKSDIVSLVH--DK-----VLDNND 143 (180)
T ss_dssp HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTT-C--CHHHHHHHHHCTTCSSCBCHHHHHHHTT--TS-----SCCHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhccc-CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHc--CC-----CCCHHH
Confidence 356889999999999999999999988765433 3347899999999999999999999999997 22 788887
Q ss_pred HHHHHHHHHHHcCCCCC--------CcccHHHHHHHHHh
Q psy5584 1451 VTELIDGMFQDAGLDSK--------DFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1451 ~~~li~~if~~~D~d~d--------G~Is~eEF~~~l~~ 1481 (2014)
+++ +|+.+|.|+| |.|+|+||+.+|..
T Consensus 144 ~~~----~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~~ 178 (180)
T 3mse_B 144 IDN----FFLSVHSIKKGIPREHIINKISFQEFKDYMLS 178 (180)
T ss_dssp HHH----HHHHHHTC---------CCCBCHHHHHHHHHT
T ss_pred HHH----HHHHhhhccCcccccccCCeeeHHHHHHHHHh
Confidence 655 7788999988 99999999999875
No 148
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=99.50 E-value=3.3e-14 Score=183.02 Aligned_cols=150 Identities=13% Similarity=0.093 Sum_probs=106.1
Q ss_pred CCCEEEEEecCCCCCcccccccCCCCC--CCeEEEEEEec-------------CCccHHHHhhh----------ccCCCC
Q psy5584 1761 SGQWVRLACTAFKNAAYHSFTLTSAPH--ENFLSCHIKAQ-------------GPWTWKLRNYF----------DPCNFN 1815 (2014)
Q Consensus 1761 pGQyv~L~~p~~~~~e~HPFTIaS~p~--~~~l~l~Ir~~-------------G~~T~~L~~~~----------~~~~~~ 1815 (2014)
|+||+...+|. .+.|||||+|+|. ++.++|+|+.. |-.|..|.+.+ ..+...
T Consensus 278 p~~~ll~~lp~---l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~~~~~~~~~~Gd~~ 354 (539)
T 2qtl_A 278 PLSLLLEHLPK---LQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASVLQPNIHASHEDSG 354 (539)
T ss_dssp CHHHHHHHSCB---CCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTTC------------
T ss_pred CHHHHHHhCcC---CcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhhccccccCCCCCcc
Confidence 45665555554 4889999999995 68999999986 77899998875 222100
Q ss_pred CCCCCcEEEEECCCC-CCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCc-ccHHHH
Q psy5584 1816 ASEDQPKIRLEGPFG-GGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSH-KHFEWF 1893 (2014)
Q Consensus 1816 ~~~~~~~v~IdGPyG-~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~-~~l~w~ 1893 (2014)
......|.|.||+| .|..+.....++||||||||||||++++++.......+ ......++.|+|++|+. +++. |
T Consensus 355 -~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~--~~~~~~~v~LffG~R~~~~D~l-y 430 (539)
T 2qtl_A 355 -KALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQH--PDGNFGAMWLFFGCRHKDRDYL-F 430 (539)
T ss_dssp ---CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHC--TTCCCCCEEEEEEESCTTTCCT-T
T ss_pred -ccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhcc--ccCCCCCEEEEEEECCcchhhH-H
Confidence 01123899999997 66544344578999999999999999999965432111 00123589999999998 5665 7
Q ss_pred HHHHHHHHhcCCCCcEEEEEEEcCCC
Q psy5584 1894 IDVLRDVEKKDVTNVLEIHIFITQFF 1919 (2014)
Q Consensus 1894 ~~~L~~l~~~~~~~~l~v~iyvT~~~ 1919 (2014)
.++|.++.+.. ..+++++.+|+..
T Consensus 431 ~dEL~~~~~~g--~~~~l~~afSRd~ 454 (539)
T 2qtl_A 431 RKELRHFLKHG--ILTHLKVSFSRDA 454 (539)
T ss_dssp HHHHHHHHHTT--SSCEEEEEESSSC
T ss_pred HHHHHHHHHhC--CCcEEEEEEccCC
Confidence 89999987643 4568888888853
No 149
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Probab=99.50 E-value=1.4e-14 Score=200.59 Aligned_cols=199 Identities=20% Similarity=0.284 Sum_probs=137.3
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcC--------CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhc
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--------GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1283 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~--------~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~ 1283 (2014)
...++++|..+| |++|.|+.+||..+|..+.. ..++++++.+|+.+|.|++|.|+++||..++....
T Consensus 533 ~~~l~~~F~~~D-~~dG~Is~~El~~~L~~~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~---- 607 (900)
T 1qxp_A 533 DDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRIR---- 607 (900)
T ss_dssp --------CCCC-CSSSSCCCSCTTTTTCC---------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHHH----
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHhhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHH----
Confidence 456889999999 99999999999999988654 78899999999999999999999999999875420
Q ss_pred CCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHH
Q psy5584 1284 TTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS 1363 (2014)
Q Consensus 1284 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~ 1363 (2014)
.++.+|.. .|.|++ |.|+.+||..
T Consensus 608 ----------------------------------------~l~~~F~~----------~D~d~~------G~Is~~El~~ 631 (900)
T 1qxp_A 608 ----------------------------------------NYLTIFRK----------FDLDKS------GSMSAYEMRM 631 (900)
T ss_dssp ----------------------------------------HHHHHHGG----------GCTTCC------SCCBHHHHHH
T ss_pred ----------------------------------------HHHHHHHh----------hCCCCC------CeECHHHHHH
Confidence 12222222 233444 4899999988
Q ss_pred Hh---CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCC-----------------
Q psy5584 1364 AL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG----------------- 1423 (2014)
Q Consensus 1364 ~L---g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG----------------- 1423 (2014)
.+ |..++.++++.++..+| |++|.|+|+||+.++... +.+..+|+.+|+|++|
T Consensus 632 ~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~------~~l~~~F~~~D~d~~G~It~~~~efl~~~~~~~ 704 (900)
T 1qxp_A 632 AIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRL------EILFKIFKQLDPENTGTIQLDLISWLSFSVLGK 704 (900)
T ss_dssp HHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHH------HHHHHHHHHSCSSCCSCEEEEHHHHHHHTCC--
T ss_pred HHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHH------HHHHHHHHhhCCCCCceEEecHHHHHHHhhhcc
Confidence 76 77788889999999999 999999999998887654 3345555555555555
Q ss_pred -----------------------------------------eeeHHHHHHHHHHHHHhhc---CCCCCHHHHHHHHHHHH
Q psy5584 1424 -----------------------------------------VIDKGELAEMLRSLVEMAR---TTSLTDSQVTELIDGMF 1459 (2014)
Q Consensus 1424 -----------------------------------------~Is~eEf~~~L~~l~~~~~---~~~ls~~e~~~li~~if 1459 (2014)
.|+.+||+.++..++.... ...++.++ ++.||
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~G~Is~~El~~~L~~~~~~~~~~~~~~~s~~~----~~~l~ 780 (900)
T 1qxp_A 705 LAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDT----CRSMV 780 (900)
T ss_dssp ------------CCCCCC--------------CCCCTTCSSCBCHHHHTTTSCC----CCSCC--CCCHHH----HHHHH
T ss_pred ccccccccccccccccCCCCCChHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcccccccccCCCCHHH----HHHHH
Confidence 4566666666654432000 01345554 45588
Q ss_pred HHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1460 QDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1460 ~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+.+|.|+||.|+|+||..++...
T Consensus 781 ~~~D~d~dG~Is~~EF~~l~~~~ 803 (900)
T 1qxp_A 781 AVMDSDTTGKLGFEEFKYLWNNI 803 (900)
T ss_dssp HHHCCSSSSSBCSHHHHHHHHHH
T ss_pred HHHCCCCCCeECHHHHHHHHHHH
Confidence 89999999999999999998654
No 150
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.50 E-value=1.4e-13 Score=153.29 Aligned_cols=114 Identities=18% Similarity=0.321 Sum_probs=88.6
Q ss_pred CCCChHHHHHHHHHHHc---cCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH-HHHHhh
Q psy5584 1366 GMKSDAVFVRMMFNIVD---KDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR-SLVEMA 1441 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D---~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~-~l~~~~ 1441 (2014)
|..++..++..+|..+| .+++|.|+++||+.++..+......++++.+|+.||+|+||+|+.+||+.+++ .++.
T Consensus 53 g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~-- 130 (179)
T 3a8r_A 53 GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASA-- 130 (179)
T ss_dssp TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHT--
T ss_pred CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhcc--
Confidence 44455666777887777 46789999999999988776667788999999999999999999999999998 6653
Q ss_pred cCCC-CC--HHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1442 RTTS-LT--DSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1442 ~~~~-ls--~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
. ++ ++..++.++.+|+.+|.|+||.|+|+||+.++...|.
T Consensus 131 ---~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~p~ 173 (179)
T 3a8r_A 131 ---NKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPS 173 (179)
T ss_dssp ---THHHHHHHHHHHHHHHHHHHHSTTCCSEECHHHHHHHHC----
T ss_pred ---ccccccccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhCcc
Confidence 2 20 1112334666899999999999999999999987664
No 151
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=99.49 E-value=2.3e-13 Score=147.56 Aligned_cols=141 Identities=20% Similarity=0.299 Sum_probs=121.2
Q ss_pred HHHHHHHHhhc-CCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1213 VFVRMMFNIVD-KDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1213 ~~l~~lF~~~D-~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
..++.+|..+| .|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++....... .
T Consensus 13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~----~---- 84 (158)
T 2jnf_A 13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE----V---- 84 (158)
T ss_dssp HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC----C----
T ss_pred HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc----c----
Confidence 34889999999 99999999999999999999899999999999999999999999999999876521000 0
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
......
T Consensus 85 --------------------------------------------------------------------------~~~~~~ 90 (158)
T 2jnf_A 85 --------------------------------------------------------------------------NPEQMQ 90 (158)
T ss_dssp --------------------------------------------------------------------------CTTTTS
T ss_pred --------------------------------------------------------------------------chhhHH
Confidence 000112
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
..+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 91 ~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 154 (158)
T 2jnf_A 91 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154 (158)
T ss_dssp STHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTS
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3488899999999999999999999999887778889999999999999999999999998875
No 152
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.49 E-value=8.6e-14 Score=158.78 Aligned_cols=94 Identities=15% Similarity=0.239 Sum_probs=77.7
Q ss_pred HHHHccCCCCceeHHHHHHHHH---------HHhc-CCcHHH-HHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCC
Q psy5584 1378 FNIVDKDGDGRISFQEFLDTVV---------LFSR-GHTEDK-LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL 1446 (2014)
Q Consensus 1378 f~~~D~DgdG~Isf~EFl~~l~---------~~~~-~~~~e~-l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~l 1446 (2014)
|..+|.|++|.|+++||+.++. .+.. ....++ ++.+|+.+|+|++|.|+.+||+.+++.++ +
T Consensus 87 f~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g-------~ 159 (208)
T 2hpk_A 87 FLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD-------V 159 (208)
T ss_dssp HHHTTCBTTTBEEGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT-------S
T ss_pred HHHhCCCCCCeEcHHHHHHHHHHHhhhhhhhhccCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-------c
Confidence 3999999999999999999986 3322 222334 89999999999999999999999998653 5
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1447 TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1447 s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++++ .+|+.+|.|+||.|+|+||+.++...
T Consensus 160 ~~~~~~----~~~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 160 PQEAAY----TFFEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp CTTHHH----HHHHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred CHHHHH----HHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 666554 48888999999999999999999764
No 153
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.49 E-value=4.7e-14 Score=159.54 Aligned_cols=106 Identities=16% Similarity=0.220 Sum_probs=89.1
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..++..+ +|.|+|+||+.++..... ....+.+..+|+.+|.|++|.|+.+||+.++ .++.
T Consensus 86 lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~---- 156 (196)
T 3dtp_E 86 LGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGE---- 156 (196)
T ss_dssp TSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSSCCHHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSS----
T ss_pred hCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCC----
Confidence 34556667777777665 899999999999876433 3567889999999999999999999999999 7765
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.+|...+.
T Consensus 157 -~~~~~~~~~----l~~~~D~d~dG~I~~~EF~~~l~~~~~ 192 (196)
T 3dtp_E 157 -KFSQDEVDQ----ALSEAPIDGNGLIDIKKFAQILTKGAK 192 (196)
T ss_dssp -CCCHHHHHH----HHHSSCEETTEECHHHHHHHHHSSCCB
T ss_pred -CCCHHHHHH----HHHHcCCCCCCEEeHHHHHHHHHcCCc
Confidence 788887655 888899999999999999999987664
No 154
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}
Probab=99.49 E-value=1.8e-14 Score=163.20 Aligned_cols=136 Identities=20% Similarity=0.248 Sum_probs=105.7
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|+|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++.....
T Consensus 57 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~------------ 124 (197)
T 3pm8_A 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQT------------ 124 (197)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----CHHHHHHHHC-------CEEHHHHHHTTCCHHH------------
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHh------------
Confidence 45899999999999999999999999999988889999999999999999999999999887532110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
....+
T Consensus 125 ---------------------------------------------------------------------------~~~~~ 129 (197)
T 3pm8_A 125 ---------------------------------------------------------------------------YLKKE 129 (197)
T ss_dssp ---------------------------------------------------------------------------HCSHH
T ss_pred ---------------------------------------------------------------------------hhhHH
Confidence 01234
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHH--hcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLF--SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~--~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|+.+|.|++|.|+.+||..++... ....+++.+..+|+.+|.|+||.|+.+||..+++
T Consensus 130 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 194 (197)
T 3pm8_A 130 VCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194 (197)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHC----CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 58889999999999999999999998776 3345677899999999999999999999999886
No 155
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5
Probab=99.49 E-value=2.2e-13 Score=154.82 Aligned_cols=138 Identities=22% Similarity=0.293 Sum_probs=120.4
Q ss_pred cHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1211 DAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~ 1289 (2014)
+..+++.+|..+|.| ++|.|+.+||..++..++...+.+.++.+|+.+|.|++|.|+++||..++....
T Consensus 20 ~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~---------- 89 (204)
T 1jba_A 20 DAAQLQEWYKKFLEECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVL---------- 89 (204)
T ss_dssp HHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHS----------
T ss_pred CHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHhcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHc----------
Confidence 567789999999999 899999999999999988888899999999999999999999999999875421
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCC
Q psy5584 1290 SQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369 (2014)
Q Consensus 1290 ~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~ 1369 (2014)
...
T Consensus 90 -----------------------------------------------------------------------------~~~ 92 (204)
T 1jba_A 90 -----------------------------------------------------------------------------RGT 92 (204)
T ss_dssp -----------------------------------------------------------------------------SCC
T ss_pred -----------------------------------------------------------------------------cCC
Confidence 122
Q ss_pred hHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-----------------CCcHHHHHHHHhhhcCCCCCeeeHHHHHH
Q psy5584 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-----------------GHTEDKLRIIFDMCDNDRNGVIDKGELAE 1432 (2014)
Q Consensus 1370 s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-----------------~~~~e~l~~~F~~~D~DgdG~Is~eEf~~ 1432 (2014)
+...+..+|..+|.|++|.|+++||..++..... ...++.+..+|+.+|.|+||.|+.+||..
T Consensus 93 ~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~ 172 (204)
T 1jba_A 93 LEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVE 172 (204)
T ss_dssp CTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHH
Confidence 3456888999999999999999999999887621 14567899999999999999999999999
Q ss_pred HHH
Q psy5584 1433 MLR 1435 (2014)
Q Consensus 1433 ~L~ 1435 (2014)
++.
T Consensus 173 ~~~ 175 (204)
T 1jba_A 173 GAR 175 (204)
T ss_dssp HHT
T ss_pred HHH
Confidence 986
No 156
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.49 E-value=6.1e-14 Score=156.14 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=82.3
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhcC---------CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRG---------HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~---------~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
++.+|..+|.|++|.|+++||+.++...... ...+.++.+|+.+|+|++|.|+.+||..+++.+
T Consensus 62 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~------- 134 (185)
T 2sas_A 62 WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF------- 134 (185)
T ss_dssp HHHHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS-------
T ss_pred HHHHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHh-------
Confidence 4567999999999999999999998776432 244789999999999999999999999998743
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++++ ..+|+.+|.|+||.|+|+||+.++...
T Consensus 135 g~~~~~~----~~~~~~~D~d~dG~i~~~ef~~~~~~~ 168 (185)
T 2sas_A 135 QLQCADV----PAVYNVITDGGKVTFDLNRYKELYYRL 168 (185)
T ss_dssp CCCCSSH----HHHHHHHHTTTTSCCSHHHHHHHHHHH
T ss_pred CCCHHHH----HHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence 3455544 458889999999999999999999864
No 157
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Probab=99.48 E-value=1.9e-13 Score=154.63 Aligned_cols=136 Identities=20% Similarity=0.287 Sum_probs=114.4
Q ss_pred HHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcCCCCH-HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1213 VFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSRGHTE-DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS 1290 (2014)
Q Consensus 1213 ~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~~~~e-eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~ 1290 (2014)
.+++.+|..+|.+ ++|.|+.+||..++..++..... ++++.+|+.+|.|++|.|+++||..++..+
T Consensus 14 ~el~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~------------ 81 (198)
T 2r2i_A 14 TECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLV------------ 81 (198)
T ss_dssp SCHHHHHHHHHHHCTTSEECHHHHHHHHTCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH------------
T ss_pred HHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHH------------
Confidence 3478899999998 89999999999999877654443 469999999999999999999999987542
Q ss_pred HHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCCh
Q psy5584 1291 QVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370 (2014)
Q Consensus 1291 e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s 1370 (2014)
+...+
T Consensus 82 ---------------------------------------------------------------------------~~~~~ 86 (198)
T 2r2i_A 82 ---------------------------------------------------------------------------LKGKV 86 (198)
T ss_dssp ---------------------------------------------------------------------------SSCCH
T ss_pred ---------------------------------------------------------------------------ccCch
Confidence 12234
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHh------cC-CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS------RG-HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~------~~-~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
...+..+|..+|.|++|.|+++||..++..+. .. ..++.+..+|+.+|.|++|.|+.+||..++.
T Consensus 87 ~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 158 (198)
T 2r2i_A 87 DQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158 (198)
T ss_dssp HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 55688899999999999999999999998764 22 3345699999999999999999999999886
No 158
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.48 E-value=1.1e-13 Score=152.63 Aligned_cols=96 Identities=17% Similarity=0.333 Sum_probs=80.5
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhcC-----CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRG-----HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1448 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~-----~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~ 1448 (2014)
++.+|..+| ++|.|+++||+.++...... ...+.++.+|+.+|+|++|.|+.+||+.++..+ ++++
T Consensus 57 ~~~l~~~~D--~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~-------g~~~ 127 (174)
T 1q80_A 57 WDNFLTAVA--GGKGIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-------GLDK 127 (174)
T ss_dssp HHHTGGGTT--TTSCEEHHHHHHHHHHHTTSTTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH-------TCCG
T ss_pred HHHHHHhcC--CCCeEcHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc-------CCCH
Confidence 456778888 89999999999998877542 224679999999999999999999999999876 3566
Q ss_pred HHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1449 SQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1449 ~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+++ +.+|+.+|.|+||.|+|+||+.+|...
T Consensus 128 ~~~----~~~~~~~D~d~dg~i~~~ef~~~~~~~ 157 (174)
T 1q80_A 128 TMA----PASFDAIDTNNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp GGH----HHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHH----HHHHHHhCCCCCceEeHHHHHHHHHHH
Confidence 654 448888999999999999999999753
No 159
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.48 E-value=2.6e-14 Score=165.51 Aligned_cols=102 Identities=21% Similarity=0.318 Sum_probs=81.0
Q ss_pred HHHHHHHH-----ccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1374 VRMMFNIV-----DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1448 (2014)
Q Consensus 1374 l~~lf~~~-----D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~ 1448 (2014)
+..+|..+ |.|++|.|+|+||+.++.........+.++.+|+.+|+|++|+|+.+||+.++..++.. .++.
T Consensus 94 ~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~----g~~~ 169 (226)
T 2lvv_A 94 VQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYIYDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEW----GVDI 169 (226)
T ss_dssp HHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHH----TCCC
T ss_pred HHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhccCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhc----CCCH
Confidence 44445544 99999999999999975544443445689999999999999999999999999987431 2232
Q ss_pred HHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1449 SQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1449 ~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
++ ++.+|+.+|.|+||.|+|+||+.+|....
T Consensus 170 ~e----~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 200 (226)
T 2lvv_A 170 TD----ATTVFNEIDTNGSGVVTFDEFSCWAVTKK 200 (226)
T ss_dssp CS----CHHHHHHHCCSCSSCEEHHHHHHHHHHHH
T ss_pred HH----HHHHHHHhCCCCCCcEeHHHHHHHHHhcC
Confidence 33 45588999999999999999999998754
No 160
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A
Probab=99.48 E-value=1.1e-13 Score=148.45 Aligned_cols=140 Identities=16% Similarity=0.230 Sum_probs=117.5
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhc-cCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHH
Q psy5584 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC-DNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVT 1293 (2014)
Q Consensus 1215 l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~-D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~ 1293 (2014)
++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+ |.|++|.|+++||..++.......
T Consensus 6 l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~----------- 74 (148)
T 1m45_A 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKEL----------- 74 (148)
T ss_dssp CTTCHHHHCTTCCSEEEGGGHHHHHHHTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHH-----------
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhc-----------
Confidence 56789999999999999999999999999999999999999999 999999999999999876521000
Q ss_pred HHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHH
Q psy5584 1294 ELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF 1373 (2014)
Q Consensus 1294 ~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~ 1373 (2014)
.. ........
T Consensus 75 ---~~-------------------------------------------------------------------~~~~~~~~ 84 (148)
T 1m45_A 75 ---DA-------------------------------------------------------------------TTKAKTED 84 (148)
T ss_dssp ---HG-------------------------------------------------------------------GGCCCTHH
T ss_pred ---cc-------------------------------------------------------------------cccccHHH
Confidence 00 00112345
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 85 ~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~ 146 (148)
T 1m45_A 85 FVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL 146 (148)
T ss_dssp HHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred HHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence 88899999999999999999999999887778889999999999999999999999999875
No 161
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5
Probab=99.47 E-value=2.4e-13 Score=157.16 Aligned_cols=155 Identities=15% Similarity=0.291 Sum_probs=124.7
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcC-CCCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~-~~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
..++.+++...+. ...+..+++.+|..||.+ ++|.|+++||..++..+.. ..++++++.+|+.+|.|++|.|+++||
T Consensus 32 ~~l~~~~l~~l~~~~~~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef 111 (224)
T 1s1e_A 32 VCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDF 111 (224)
T ss_dssp ------CHHHHHHHSSCCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTSCCHHHHHHHHHHHCTTCSSCBCHHHH
T ss_pred cCCCHHHHHHHHHHcCCCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCCCcHHHHHHHHHHhcCCCCCcEeHHHH
Confidence 5667777776442 346888999999999995 9999999999999998765 478899999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++.....
T Consensus 112 ~~~l~~~~~----------------------------------------------------------------------- 120 (224)
T 1s1e_A 112 VTALSILLR----------------------------------------------------------------------- 120 (224)
T ss_dssp HHHHHHHHH-----------------------------------------------------------------------
T ss_pred HHHHHHHcc-----------------------------------------------------------------------
Confidence 998865220
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH----hc--------CCcHHHHHHHHhhhcC
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SR--------GHTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~----~~--------~~~~e~l~~~F~~~D~ 1419 (2014)
......++.+|+.+|.|++|.|+++||..++... .. ...++.+..+|+.+|.
T Consensus 121 ----------------~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 184 (224)
T 1s1e_A 121 ----------------GTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDK 184 (224)
T ss_dssp ----------------CCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCT
T ss_pred ----------------CCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCC
Confidence 1234568889999999999999999999998775 21 1234789999999999
Q ss_pred CCCCeeeHHHHHHHHHH
Q psy5584 1420 DRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~ 1436 (2014)
|+||.|+.+||..++..
T Consensus 185 d~dG~Is~~EF~~~~~~ 201 (224)
T 1s1e_A 185 NKDGIVTLDEFLESCQE 201 (224)
T ss_dssp TCSSCEEHHHHHHHHHT
T ss_pred CCCCcEeHHHHHHHHHh
Confidence 99999999999999873
No 162
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=99.47 E-value=3.9e-13 Score=146.19 Aligned_cols=140 Identities=24% Similarity=0.379 Sum_probs=120.8
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++.......
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~---------- 89 (162)
T 1top_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKED---------- 89 (162)
T ss_dssp HHHHHHHHTTTCSCSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccc----------
Confidence 4489999999999999999999999999999899999999999999999999999999999876521000
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
. . .....
T Consensus 90 -----------------------~-----~---------------------------------------------~~~~~ 96 (162)
T 1top_A 90 -----------------------A-----K---------------------------------------------GKSEE 96 (162)
T ss_dssp -----------------------H-----H---------------------------------------------HHHHH
T ss_pred -----------------------c-----c---------------------------------------------cccHH
Confidence 0 0 00234
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 97 ~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 159 (162)
T 1top_A 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159 (162)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 578899999999999999999999998777667888999999999999999999999999886
No 163
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=99.46 E-value=4.1e-13 Score=148.19 Aligned_cols=143 Identities=17% Similarity=0.303 Sum_probs=117.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHH----HHHHhcCCCCHHHHH-----------HHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLD----TVVLFSRGHTEDKLR-----------IIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~----~l~~l~~~~~eeel~-----------~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|.|++|.|+.+||.. ++..++...+.+++. .+|+.+|.|++|.|+++||..++..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef~~~~~~ 86 (176)
T 1nya_A 7 DRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTEN 86 (176)
T ss_dssp HHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 5689999999999999999999999 677778777777776 8999999999999999999998865
Q ss_pred HHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccccccccc
Q psy5584 1278 LVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357 (2014)
Q Consensus 1278 ~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls 1357 (2014)
.... .....
T Consensus 87 ~~~~-----~~~~~------------------------------------------------------------------ 95 (176)
T 1nya_A 87 LIFE-----QGEAS------------------------------------------------------------------ 95 (176)
T ss_dssp HHSS-----SCHHH------------------------------------------------------------------
T ss_pred HhcC-----Cchhh------------------------------------------------------------------
Confidence 3210 00000
Q ss_pred HHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1358 ~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
+.. .....+..+|..+|.|++|.|+++||..++..+. .+++++..+|+.+|.|++|.|+.+||..++..
T Consensus 96 ---~~~-----~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 164 (176)
T 1nya_A 96 ---FNR-----VLGPVVKGIVGMCDKNADGQINADEFAAWLTALG--MSKAEAAEAFNQVDTNGNGELSLDELLTAVRD 164 (176)
T ss_dssp ---HHH-----HHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSC
T ss_pred ---HHH-----HHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 000 0134578899999999999999999999998764 78889999999999999999999999999874
No 164
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Probab=99.46 E-value=1.2e-13 Score=144.70 Aligned_cols=132 Identities=26% Similarity=0.422 Sum_probs=110.8
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHH
Q psy5584 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1294 (2014)
Q Consensus 1215 l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~ 1294 (2014)
++++|..+|.|++|.|+++||..++..++...++++++.+|+.+|.|++|.|+++||..++..+..
T Consensus 2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~-------------- 67 (134)
T 1jfj_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQG-------------- 67 (134)
T ss_dssp HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSC--------------
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcc--------------
Confidence 678999999999999999999999999988888999999999999999999999999987632100
Q ss_pred HHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHH
Q psy5584 1295 LIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFV 1374 (2014)
Q Consensus 1295 ~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l 1374 (2014)
.+...+..++
T Consensus 68 ----------------------------------------------------------------------~~~~~~~~~~ 77 (134)
T 1jfj_A 68 ----------------------------------------------------------------------QDLSDDKIGL 77 (134)
T ss_dssp ----------------------------------------------------------------------CSSHHHHHHH
T ss_pred ----------------------------------------------------------------------cccCCCHHHH
Confidence 0011123448
Q ss_pred HHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH
Q psy5584 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434 (2014)
Q Consensus 1375 ~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L 1434 (2014)
..+|..+|.|++|.|+++||..++..... ..+..+|+.+|.|++|.|+.+||..++
T Consensus 78 ~~~f~~~D~d~~G~i~~~e~~~~l~~~~~----~~~~~~~~~~D~~~dg~i~~~ef~~~l 133 (134)
T 1jfj_A 78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFLEFS 133 (134)
T ss_dssp HHHHHHHCCSSSSEEEHHHHHHHHTTTTC----HHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred HHHHHHHCCCCCCccCHHHHHHHHHHhCH----HHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence 88999999999999999999999875422 128999999999999999999998875
No 165
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=99.45 E-value=5.6e-13 Score=144.31 Aligned_cols=138 Identities=12% Similarity=0.174 Sum_probs=121.4
Q ss_pred HHHHHHHHhhcC--CCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1213 VFVRMMFNIVDK--DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS 1290 (2014)
Q Consensus 1213 ~~l~~lF~~~D~--dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~ 1290 (2014)
..++.+|..+|. |++|.|+.+||..++..++...+.+++..+ ..+|.|++|.|+++||..++.....
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~---------- 77 (156)
T 1wdc_C 9 DDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMD---------- 77 (156)
T ss_dssp HHHHHHHHHHHHHTCSSSCEEGGGHHHHHHHTTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTT----------
T ss_pred HHHHHHHHHHccCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhh----------
Confidence 348999999999 999999999999999999999999999999 9999999999999999998755210
Q ss_pred HHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCCh
Q psy5584 1291 QVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370 (2014)
Q Consensus 1291 e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s 1370 (2014)
.....
T Consensus 78 ---------------------------------------------------------------------------~~~~~ 82 (156)
T 1wdc_C 78 ---------------------------------------------------------------------------CEQGT 82 (156)
T ss_dssp ---------------------------------------------------------------------------SCCCC
T ss_pred ---------------------------------------------------------------------------ccCCh
Confidence 00123
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhh--hcCCCCCeeeHHHHHHHHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDM--CDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~--~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
...+..+|..+|.|++|.|+.+||..++..+....+++++..+|+. +|.|++|.|+.+||..++..
T Consensus 83 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 150 (156)
T 1wdc_C 83 FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 150 (156)
T ss_dssp HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence 4568889999999999999999999999888777888999999999 99999999999999999874
No 166
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=99.45 E-value=1.2e-12 Score=140.14 Aligned_cols=137 Identities=17% Similarity=0.233 Sum_probs=119.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhc---cCCCCCcccHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC---DNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~---D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~ 1289 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+ |.|+ |.|+++||..++.....
T Consensus 8 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~--------- 77 (149)
T 2mys_C 8 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAAN--------- 77 (149)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhc---------
Confidence 4588999999999999999999999999999999999999999999 9999 99999999988755210
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCC
Q psy5584 1290 SQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369 (2014)
Q Consensus 1290 ~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~ 1369 (2014)
.....
T Consensus 78 ---------------------------------------------------------------------------~~~~~ 82 (149)
T 2mys_C 78 ---------------------------------------------------------------------------NKDQG 82 (149)
T ss_pred ---------------------------------------------------------------------------cCCcc
Confidence 00011
Q ss_pred hHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1370 s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
....+..+|..+|.|++|.|+.+||..++..+....+++++..+|+. |.|++|.|+.+||..++.
T Consensus 83 ~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~ 147 (149)
T 2mys_C 83 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIM 147 (149)
T ss_pred hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHh
Confidence 24557889999999999999999999999888777888999999999 999999999999999875
No 167
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Probab=99.45 E-value=1.8e-13 Score=153.42 Aligned_cols=140 Identities=21% Similarity=0.379 Sum_probs=119.4
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHh-----------cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-----------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l-----------~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
.....++++|..+|.|++|.|+++||..++..+ +...+++++..+|+.+|.|++|.|+++||..++...
T Consensus 37 ~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~ 116 (191)
T 3khe_A 37 EETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDK 116 (191)
T ss_dssp TTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCH
T ss_pred HHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHh
Confidence 345679999999999999999999999999877 555667889999999999999999999999886321
Q ss_pred HHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccH
Q psy5584 1279 VEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSR 1358 (2014)
Q Consensus 1279 ~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~ 1358 (2014)
.
T Consensus 117 ~------------------------------------------------------------------------------- 117 (191)
T 3khe_A 117 Q------------------------------------------------------------------------------- 117 (191)
T ss_dssp H-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH
Q psy5584 1359 AEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1438 (2014)
Q Consensus 1359 ~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~ 1438 (2014)
.....+.+..+|..+|.|++|.|+.+||..++. ....+++.+..+|+.+|.|++|.|+.+||..++..+.
T Consensus 118 --------~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~--~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 187 (191)
T 3khe_A 118 --------LLLSRERLLAAFQQFDSDGSGKITNEELGRLFG--VTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 187 (191)
T ss_dssp --------HHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT--SSCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred --------ccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc--cCCCCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 001345588899999999999999999999887 4567788899999999999999999999999998754
No 168
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}
Probab=99.45 E-value=5.2e-13 Score=149.87 Aligned_cols=146 Identities=18% Similarity=0.249 Sum_probs=119.2
Q ss_pred HHHHHHHHhh-cCCCCcceeHHHHHHHHHHh----cCCCCHHHHHHHH-----------HhccCCCCCcccHHHHHHHHH
Q psy5584 1213 VFVRMMFNIV-DKDGDGRISFQEFLDTVVLF----SRGHTEDKLRIIF-----------DMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1213 ~~l~~lF~~~-D~dgdG~Is~~EF~~~l~~l----~~~~~eeel~~lF-----------~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
..++.+|..+ |+|+||.|+.+||..++..+ +...+.+++..+| +.+|.|++|.|+++||..++.
T Consensus 12 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~ 91 (191)
T 2ccm_A 12 NKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWA 91 (191)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHhccccccCCCCCeeeHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeECHHHHHHHHH
Confidence 4588999999 99999999999999999987 7778888888888 999999999999999999876
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccc
Q psy5584 1277 SLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSL 1356 (2014)
Q Consensus 1277 ~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~l 1356 (2014)
....... . . . ..
T Consensus 92 ~~~~~~~--------------------------------------------------~--~----------~------~~ 103 (191)
T 2ccm_A 92 ECVKSVE--------------------------------------------------K--G----------E------SL 103 (191)
T ss_dssp HHHHHHH--------------------------------------------------T--T----------C------CC
T ss_pred HHhcccc--------------------------------------------------c--h----------h------hc
Confidence 5210000 0 0 0 00
Q ss_pred cHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1357 SRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1357 s~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.......+..+|..+|+|++|.|+++||..++..+. .+++++..+|+.+|.|+||.|+.+||..++..
T Consensus 104 ----------~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g--~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~ 171 (191)
T 2ccm_A 104 ----------PEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG--IPKSDCDAAFDTLSDGGKTMVTREIFARLWTE 171 (191)
T ss_dssp ----------CHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT--CCHHHHHHHHHHHTTTTTSCCBHHHHHHHHHH
T ss_pred ----------hHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 001234588999999999999999999999987653 77888999999999999999999999999986
Q ss_pred HH
Q psy5584 1437 LV 1438 (2014)
Q Consensus 1437 l~ 1438 (2014)
+.
T Consensus 172 ~~ 173 (191)
T 2ccm_A 172 YF 173 (191)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 169
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L
Probab=99.45 E-value=3.6e-13 Score=180.62 Aligned_cols=162 Identities=16% Similarity=0.181 Sum_probs=142.9
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHh--------cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhc
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLF--------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1283 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l--------~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~ 1283 (2014)
...++++|..+| |+||.|+.+||..++..+ +...++++++.+|..+|.|++|.|+++||..++...
T Consensus 531 ~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~~----- 604 (714)
T 3bow_A 531 GDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTKI----- 604 (714)
T ss_dssp CHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHHH-----
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH-----
Confidence 356899999999 999999999999999997 668899999999999999999999999999887431
Q ss_pred CCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHH
Q psy5584 1284 TTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS 1363 (2014)
Q Consensus 1284 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~ 1363 (2014)
T Consensus 605 -------------------------------------------------------------------------------- 604 (714)
T 3bow_A 605 -------------------------------------------------------------------------------- 604 (714)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1364 ~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
..++.+|+.+|+|++|.|+.+||..++..+....+++.+..+|+.+| |+||.|+.+||..++..+.
T Consensus 605 --------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~~~----- 670 (714)
T 3bow_A 605 --------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLE----- 670 (714)
T ss_dssp --------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHHHH-----
T ss_pred --------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHH-----
Confidence 23778999999999999999999999988776678899999999999 9999999999999987432
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.+..+|+.+|.|++|.|+++|+..++....
T Consensus 671 ----------~l~~~F~~~D~d~dG~Is~~el~~l~~~~~ 700 (714)
T 3bow_A 671 ----------ILFKIFKQLDPENTGTIQLDLISWLSFSVL 700 (714)
T ss_dssp ----------HHHHHHSSSCSSCCSEEEEEHHHHHHHHHH
T ss_pred ----------HHHHHHHHhCCCCCCcEEHHHHHHHHHHHH
Confidence 255589999999999999999988776544
No 170
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.45 E-value=2e-13 Score=146.13 Aligned_cols=101 Identities=17% Similarity=0.367 Sum_probs=85.4
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
+|..++..++..++..+|.+ |+|+||+.++.... .....+.++.+|+.+|+|++|.|+.+||+.++..++.
T Consensus 44 ~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~---- 115 (146)
T 2qac_A 44 LGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGD---- 115 (146)
T ss_dssp TTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCTTCCHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSS----
T ss_pred hCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcCcchHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCC----
Confidence 35566777899999999987 99999999988643 3355788999999999999999999999999997654
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.+++++++. +|+.+ |+||.|+|+||+.+|.
T Consensus 116 -~~~~~~~~~----~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 116 -ALTDQEAID----ALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp -CCCHHHHHH----HHHHH--CSSSEEEHHHHHHHHT
T ss_pred -CCCHHHHHH----HHHHc--CCCCcCcHHHHHHHHh
Confidence 789998777 45556 8999999999999885
No 171
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=99.44 E-value=5.4e-13 Score=145.50 Aligned_cols=145 Identities=21% Similarity=0.279 Sum_probs=121.8
Q ss_pred CcCHHHHHHHhCCCCcHHHHHHHHHhhcC--CCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHH
Q psy5584 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDK--DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273 (2014)
Q Consensus 1196 ~Ls~~El~~~L~~~~~~~~l~~lF~~~D~--dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~ 1273 (2014)
.||.+|+ ++++++|..+|. |++|.|+..||..+|+.++...+++++..++. .|.+++|.|+++||..
T Consensus 2 qLt~eqi----------~elre~F~~fD~~~d~dG~I~~~El~~~lr~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~ 70 (159)
T 3i5g_C 2 QLTKDEI----------EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILP 70 (159)
T ss_dssp CCCHHHH----------HHHHHHHHHHHHHTTSSSCEEGGGHHHHHHHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHH
T ss_pred CCCHHHH----------HHHHHHHHHHCcCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHH
Confidence 4666666 348999999995 89999999999999999999999999998765 4888999999999998
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccccc
Q psy5584 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMR 1353 (2014)
Q Consensus 1274 ~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~ 1353 (2014)
++......
T Consensus 71 ~~~~~~~~------------------------------------------------------------------------ 78 (159)
T 3i5g_C 71 IYEEMSSK------------------------------------------------------------------------ 78 (159)
T ss_dssp HHHHHTTC------------------------------------------------------------------------
T ss_pred HHHHhhcc------------------------------------------------------------------------
Confidence 87542200
Q ss_pred ccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcC--CCCCeeeHHHHH
Q psy5584 1354 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN--DRNGVIDKGELA 1431 (2014)
Q Consensus 1354 g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~--DgdG~Is~eEf~ 1431 (2014)
......+++...|+.+|+|++|.|+.+||..++..+....+++++..+++.+|. |++|.|+.+||.
T Consensus 79 ------------~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~ 146 (159)
T 3i5g_C 79 ------------DTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLM 146 (159)
T ss_dssp ------------CTTCCHHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHH
T ss_pred ------------cccchHHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHH
Confidence 001234568889999999999999999999999988888889999999999995 889999999999
Q ss_pred HHHH
Q psy5584 1432 EMLR 1435 (2014)
Q Consensus 1432 ~~L~ 1435 (2014)
++|.
T Consensus 147 ~~m~ 150 (159)
T 3i5g_C 147 KKVM 150 (159)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8875
No 172
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=99.44 E-value=2e-13 Score=153.68 Aligned_cols=134 Identities=21% Similarity=0.330 Sum_probs=113.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|.|++|.|+.+||..++..++...+ +++..+|+.+|.|++|.|+++||..++....
T Consensus 52 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~------------- 117 (191)
T 3k21_A 52 EKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRK------------- 117 (191)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGG-------------
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhh-------------
Confidence 45899999999999999999999999999888777 8999999999999999999999998762200
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
....+
T Consensus 118 ---------------------------------------------------------------------------~~~~~ 122 (191)
T 3k21_A 118 ---------------------------------------------------------------------------QLSKK 122 (191)
T ss_dssp ---------------------------------------------------------------------------GCCHH
T ss_pred ---------------------------------------------------------------------------hccHH
Confidence 11345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhc--CCcH---HHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--GHTE---DKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~--~~~~---e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|.|++|.|+.+||..++..... ..++ +++..+|+.+|.|+||.|+.+||..+++
T Consensus 123 ~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 190 (191)
T 3k21_A 123 LIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK 190 (191)
T ss_dssp HHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence 5788999999999999999999999976322 2332 4689999999999999999999998874
No 173
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Probab=99.43 E-value=6.4e-13 Score=149.48 Aligned_cols=159 Identities=18% Similarity=0.294 Sum_probs=119.6
Q ss_pred ccCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHH-----HHHHHhcCCCCHH-----HHHHHHHhccCCCC
Q psy5584 1194 RTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL-----DTVVLFSRGHTED-----KLRIIFDMCDNDRN 1263 (2014)
Q Consensus 1194 ~~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~-----~~l~~l~~~~~ee-----el~~lF~~~D~D~d 1263 (2014)
...++.++.++ ++.+|..+|.|++|.|+.+||. .++..++...+.. ++..+|+.+|.|++
T Consensus 11 ~~~~s~~~~~~----------l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~ 80 (195)
T 1qv0_A 11 TDFDNPRWIKR----------HKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYG 80 (195)
T ss_dssp CCTTCHHHHHH----------HHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTT
T ss_pred cccCCHHHHHH----------HHHHHhHcCCCCCCcCcHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHcCCCCC
Confidence 34557777644 8899999999999999999999 6777777666655 68999999999999
Q ss_pred CcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCcccc
Q psy5584 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRR 1343 (2014)
Q Consensus 1264 G~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d 1343 (2014)
|.|+++||..++....... .... .
T Consensus 81 g~i~~~EF~~~~~~~~~~~--------------------------------------~~~~--------~---------- 104 (195)
T 1qv0_A 81 KEIAFPQFLDGWKQLATSE--------------------------------------LKKW--------A---------- 104 (195)
T ss_dssp CCBCHHHHHHHHHHHHHHH--------------------------------------HHHH--------H----------
T ss_pred ceEcHHHHHHHHHHHHhhh--------------------------------------hhcc--------c----------
Confidence 9999999999876532100 0000 0
Q ss_pred CCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCC
Q psy5584 1344 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1423 (2014)
Q Consensus 1344 ~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG 1423 (2014)
+ . ....-...++.+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|.|++|
T Consensus 105 -~-~------------------~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg 164 (195)
T 1qv0_A 105 -R-N------------------EPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAG 164 (195)
T ss_dssp -T-T------------------CCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTS
T ss_pred -c-c------------------HHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC
Confidence 0 0 0000112345899999999999999999999998887777889999999999999999
Q ss_pred eeeHHHHHHHHHHHH
Q psy5584 1424 VIDKGELAEMLRSLV 1438 (2014)
Q Consensus 1424 ~Is~eEf~~~L~~l~ 1438 (2014)
.|+.+||..++..+.
T Consensus 165 ~i~~~eF~~~~~~~~ 179 (195)
T 1qv0_A 165 DLDVDEMTRQHLGFW 179 (195)
T ss_dssp CEEHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHc
Confidence 999999999987643
No 174
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=99.43 E-value=6.8e-14 Score=185.89 Aligned_cols=204 Identities=15% Similarity=0.175 Sum_probs=132.5
Q ss_pred ccCCCEEEEEecCCCCCcccccccCCCCCC--CeEEEEEEe--------------cCCccHHHHhhhccCC----CCCCC
Q psy5584 1759 YHSGQWVRLACTAFKNAAYHSFTLTSAPHE--NFLSCHIKA--------------QGPWTWKLRNYFDPCN----FNASE 1818 (2014)
Q Consensus 1759 ~~pGQyv~L~~p~~~~~e~HPFTIaS~p~~--~~l~l~Ir~--------------~G~~T~~L~~~~~~~~----~~~~~ 1818 (2014)
..|+||+...+|. .+.|||||+|+|.. +.+.|+|+. .|..|..|.++ ..+. .....
T Consensus 414 ~~p~~~l~~~lp~---l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l-~~g~~~~~~~~~~ 489 (682)
T 2bpo_A 414 TVPMQFLVESVPQ---MTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNI-QLAQNNVNIAETN 489 (682)
T ss_dssp TSCHHHHHHHSCB---CCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHH-HHHHTTCCTTTSC
T ss_pred CCCHHHHHHhCcc---cccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhc-ccccccccccccc
Confidence 4688988888775 48999999999963 788998864 37788888874 3310 00112
Q ss_pred CCcEEEEECCCCCC--------------CCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCC--CCCCcCccEEEEEE
Q psy5584 1819 DQPKIRLEGPFGGG--------------NQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTN--RYSGVSCKKVYFLW 1882 (2014)
Q Consensus 1819 ~~~~v~IdGPyG~~--------------~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~--~~~~~~~~kV~liW 1882 (2014)
.+..+.|.||+|.+ ..+.....++||||||||||||+++++++....... ........++.|+|
T Consensus 490 ~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~g~~~~~~~L~f 569 (682)
T 2bpo_A 490 LPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGNNVSLGKHILFY 569 (682)
T ss_dssp CCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----CCCCCCEEEEE
T ss_pred cccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccccCCcCCEEEEE
Confidence 25578999999996 111123578999999999999999999988653200 00011245899999
Q ss_pred EeCCcccHHHHHHHHHHHHhcCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHH
Q psy5584 1883 ICPSHKHFEWFIDVLRDVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSF 1962 (2014)
Q Consensus 1883 ~~R~~~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~i 1962 (2014)
++|+.+++. |.++|++++... ...+++++.+|+.... ... |+..... -+.+.+
T Consensus 570 G~R~~~D~l-y~dEl~~~~~~~-g~~~~l~~afSr~d~~---~k~--yVqd~l~--------------------e~~~~l 622 (682)
T 2bpo_A 570 GSRNTDDFL-YQDEWPEYAKKL-DGSFEMVVAHSRLPNT---KKV--YVQDKLK--------------------DYEDQV 622 (682)
T ss_dssp EESSSSSCT-TTTTHHHHHHHH-GGGEEEEEEESCCTTS---CCC--CHHHHHH--------------------HTHHHH
T ss_pred ecCChhhhh-hHHHHHHHHHhc-CCceEEEEEECCCCCC---CCc--chHHHHH--------------------hhHHHH
Confidence 999997775 788898884321 2467888888884211 000 1000000 000111
Q ss_pred HHHHHHhCCCCCeEEEEEeCC-hhhHHHHHHHHHhhhc
Q psy5584 1963 LKFVQKKHSYVSKIGVFSCGP-RPLTKSIMSACEEVNK 1999 (2014)
Q Consensus 1963 l~~l~~~~~~~~~v~V~vCGP-~~m~~~vr~a~~~~~~ 1999 (2014)
.+ +.. ....||+||| ++|+++|++++.+...
T Consensus 623 ~~-~l~-----~~~~vYvCGpa~~M~~~V~~~L~~i~~ 654 (682)
T 2bpo_A 623 FE-MIN-----NGAFIYVCGDAKGMAKGVSTALVGILS 654 (682)
T ss_dssp HH-HHT-----TTCEEEEEECSTTHHHHHHHHHHHHHH
T ss_pred HH-HHh-----CCcEEEEeCCchHhHHHHHHHHHHHHH
Confidence 11 111 1356999999 7999999999887653
No 175
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=99.43 E-value=8.4e-13 Score=140.70 Aligned_cols=137 Identities=20% Similarity=0.295 Sum_probs=118.8
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
.++++.+|..+|.|++|.|+.+||..++..++...+.+++..+|.. |++|.|+++||..++.... .
T Consensus 4 ~~el~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~--------~--- 69 (145)
T 2bl0_B 4 ADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPI--------K--- 69 (145)
T ss_dssp HHHHHHHHHHHCTTCSSCEEGGGHHHHHHHTTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCC--------C---
T ss_pred HHHHHHHHHHhCCCCcCccCHHHHHHHHHHhCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHh--------h---
Confidence 3448999999999999999999999999999999999999999998 8999999999998874310 0
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
......
T Consensus 70 --------------------------------------------------------------------------~~~~~~ 75 (145)
T 2bl0_B 70 --------------------------------------------------------------------------TPTEQS 75 (145)
T ss_dssp --------------------------------------------------------------------------CGGGGH
T ss_pred --------------------------------------------------------------------------cCcccH
Confidence 001134
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
..+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++..
T Consensus 76 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 140 (145)
T 2bl0_B 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT 140 (145)
T ss_dssp HHHHHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence 55888999999999999999999999988876778899999999999999999999999999874
No 176
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=99.43 E-value=9.9e-13 Score=142.91 Aligned_cols=139 Identities=19% Similarity=0.222 Sum_probs=121.1
Q ss_pred HHHHHHHHhhc--CCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1213 VFVRMMFNIVD--KDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS 1290 (2014)
Q Consensus 1213 ~~l~~lF~~~D--~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~ 1290 (2014)
..++++|..+| +|++|.|+.+||..++..++...+++++..+|..+|.+ +|.|+++||..++.....
T Consensus 9 ~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~d~~-~g~i~~~eF~~~~~~~~~---------- 77 (159)
T 2ovk_C 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMG-EKAYKLEEILPIYEEMSS---------- 77 (159)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHTTCCSSTT-SCEEEHHHHHHHHHHHTT----------
T ss_pred HHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHcCCCCCHHHHHHHHHHhcCC-CCeEcHHHHHHHHHHHhh----------
Confidence 45899999999 99999999999999999999999999999999999985 699999999988754210
Q ss_pred HHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCCh
Q psy5584 1291 QVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370 (2014)
Q Consensus 1291 e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s 1370 (2014)
......
T Consensus 78 --------------------------------------------------------------------------~~~~~~ 83 (159)
T 2ovk_C 78 --------------------------------------------------------------------------KDTGTA 83 (159)
T ss_dssp --------------------------------------------------------------------------CSTTCC
T ss_pred --------------------------------------------------------------------------ccCCCc
Confidence 001123
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHh--hhcCCCCCeeeHHHHHHHHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFD--MCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~--~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
...+..+|..+|+|++|.|+.+||..++..+....+++++..+|+ .+|.|++|.|+.+||..++..
T Consensus 84 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~ 151 (159)
T 2ovk_C 84 ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151 (159)
T ss_dssp HHHHHHHHHHTCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCTTCCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCCcEeHHHHHHHHhc
Confidence 456888999999999999999999999998877788899999999 889999999999999998874
No 177
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5
Probab=99.43 E-value=4.5e-13 Score=149.01 Aligned_cols=146 Identities=16% Similarity=0.259 Sum_probs=118.6
Q ss_pred HHHHHHHHhh-cCCCCcceeHHHHHHHHHHhc----CCCCHHHHHHH-----------HHhccCCCCCcccHHHHHHHHH
Q psy5584 1213 VFVRMMFNIV-DKDGDGRISFQEFLDTVVLFS----RGHTEDKLRII-----------FDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1213 ~~l~~lF~~~-D~dgdG~Is~~EF~~~l~~l~----~~~~eeel~~l-----------F~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
..++.+|..+ |.|+||.|+++||..++..+. ...+.+++..+ |+.+|.|++|.|+++||..++.
T Consensus 8 ~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~ 87 (185)
T 2sas_A 8 QKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMWE 87 (185)
T ss_dssp HHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred HHHHHHHHHheeCCCCCeEcHHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHH
Confidence 5689999999 999999999999999999877 67787777655 9999999999999999999886
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccc
Q psy5584 1277 SLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSL 1356 (2014)
Q Consensus 1277 ~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~l 1356 (2014)
...... . ...
T Consensus 88 ~~~~~~-----------------------------------------------------~---------~~~-------- 97 (185)
T 2sas_A 88 KTIATC-----------------------------------------------------K---------SVA-------- 97 (185)
T ss_dssp HHHHTC-----------------------------------------------------C---------SGG--------
T ss_pred HHhccc-----------------------------------------------------c---------chh--------
Confidence 532100 0 000
Q ss_pred cHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1357 SRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1357 s~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
-........+..+|..+|.|++|.|+++||..++..+ +.+++++..+|+.+|.|+||.|+.+||..++..
T Consensus 98 --------~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~--g~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~~ 167 (185)
T 2sas_A 98 --------DLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNF--QLQCADVPAVYNVITDGGKVTFDLNRYKELYYR 167 (185)
T ss_dssp --------GSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSS--CCCCSSHHHHHHHHHTTTTSCCSHHHHHHHHHH
T ss_pred --------hhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHh--CCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHH
Confidence 0011234568999999999999999999999998654 356778999999999999999999999999986
Q ss_pred HH
Q psy5584 1437 LV 1438 (2014)
Q Consensus 1437 l~ 1438 (2014)
..
T Consensus 168 ~~ 169 (185)
T 2sas_A 168 LL 169 (185)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 178
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A
Probab=99.42 E-value=9.6e-13 Score=143.62 Aligned_cols=144 Identities=20% Similarity=0.322 Sum_probs=115.1
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHH----HhcCCCCHHHHH-----------HHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVV----LFSRGHTEDKLR-----------IIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~----~l~~~~~eeel~-----------~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
...++.+|..+|.|++|.|+.+||..++. .++...+.+++. .+|+.+|.|++|.|+++||..++.
T Consensus 3 ~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~ 82 (166)
T 3akb_A 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGAV 82 (166)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTHH
T ss_pred HHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 35689999999999999999999999764 356666666665 458999999999999999999876
Q ss_pred HHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccc
Q psy5584 1277 SLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSL 1356 (2014)
Q Consensus 1277 ~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~l 1356 (2014)
...... ..
T Consensus 83 ~~~~~~-------------------------------~~----------------------------------------- 90 (166)
T 3akb_A 83 KRLRDK-------------------------------PD----------------------------------------- 90 (166)
T ss_dssp HHHHHS-------------------------------HH-----------------------------------------
T ss_pred HHhccC-------------------------------cc-----------------------------------------
Confidence 532100 00
Q ss_pred cHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1357 SRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1357 s~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.+.. .....+..+|..+|.|++|.|+.+||..++..+. .+++++..+|+.+|.|++|.|+.+||..++..
T Consensus 91 ---~~~~-----~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~--~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~ 160 (166)
T 3akb_A 91 ---RFAE-----MARPFLHAALGVADTDGDGAVTVADTARALTAFG--VPEDLARQAAAALDTDGDGKVGETEIVPAFAR 160 (166)
T ss_dssp ---HHHH-----HHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHH
T ss_pred ---chHH-----HHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 0000 0123478899999999999999999999998765 77889999999999999999999999999876
Q ss_pred H
Q psy5584 1437 L 1437 (2014)
Q Consensus 1437 l 1437 (2014)
+
T Consensus 161 ~ 161 (166)
T 3akb_A 161 Y 161 (166)
T ss_dssp H
T ss_pred H
Confidence 4
No 179
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}
Probab=99.41 E-value=9.1e-13 Score=155.60 Aligned_cols=155 Identities=17% Similarity=0.240 Sum_probs=127.4
Q ss_pred cCcCHHHHHHHhC-CCCcHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhc-CCCCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALG-MKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~-~~~~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~-~~~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
..++.+++.+.+. ...+.++++.+|..||.+ ++|.|+++||..++..+. ...+++.++.+|+.+|.|++|.|+++||
T Consensus 72 ~~l~~e~l~~l~~~~~~s~~ei~~l~~~fd~~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef 151 (256)
T 2jul_A 72 VRHQPEGLDQLQAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDF 151 (256)
T ss_dssp ----CTHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHH
T ss_pred ccCCHHHHHHHHHHhCCCHHHHHHHHHHHHhhCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHH
Confidence 4566667766442 346788899999999986 899999999999999875 5677889999999999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccc
Q psy5584 1272 AEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVV 1351 (2014)
Q Consensus 1272 ~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~ 1351 (2014)
..++....
T Consensus 152 ~~~l~~~~------------------------------------------------------------------------ 159 (256)
T 2jul_A 152 VVGLSILL------------------------------------------------------------------------ 159 (256)
T ss_dssp HHHHHHHH------------------------------------------------------------------------
T ss_pred HHHHHHHh------------------------------------------------------------------------
Confidence 99886522
Q ss_pred ccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh------------cCCcHHHHHHHHhhhcC
Q psy5584 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS------------RGHTEDKLRIIFDMCDN 1419 (2014)
Q Consensus 1352 ~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~------------~~~~~e~l~~~F~~~D~ 1419 (2014)
...+.+.+..+|..+|.|++|.|+++||..++..+. ....++.+..+|+.+|.
T Consensus 160 ---------------~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~ 224 (256)
T 2jul_A 160 ---------------RGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDR 224 (256)
T ss_dssp ---------------SCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCC
T ss_pred ---------------ccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCC
Confidence 123456688999999999999999999999988762 12367889999999999
Q ss_pred CCCCeeeHHHHHHHHHH
Q psy5584 1420 DRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1420 DgdG~Is~eEf~~~L~~ 1436 (2014)
|+||.|+.+||..++..
T Consensus 225 d~dG~Is~~Ef~~~~~~ 241 (256)
T 2jul_A 225 NQDGVVTIDEFLETCQK 241 (256)
T ss_dssp STTCSBCHHHHHHHHHH
T ss_pred CCCCcEeHHHHHHHHHh
Confidence 99999999999999874
No 180
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=99.41 E-value=8.5e-13 Score=166.19 Aligned_cols=185 Identities=11% Similarity=0.195 Sum_probs=123.5
Q ss_pred CCCcccccccCCCCC--CCeEEEEEEec-----------CCccHHHHhhhccCCCCCCCCCcEEEEECCCCCCCCCcCCC
Q psy5584 1773 KNAAYHSFTLTSAPH--ENFLSCHIKAQ-----------GPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKF 1839 (2014)
Q Consensus 1773 ~~~e~HPFTIaS~p~--~~~l~l~Ir~~-----------G~~T~~L~~~~~~~~~~~~~~~~~v~IdGPyG~~~~~~~~~ 1839 (2014)
...+.|+|||+|+|. ++.+.|+|+.+ |..|..|.+....+.. ....+|.|.||+|.+..+....
T Consensus 230 p~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G~~S~~L~~l~~gg~~---~~~~~v~v~~p~g~F~lp~~~~ 306 (458)
T 3qfs_A 230 PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGEN---GGRALVPMFVRKSQFRLPFKAT 306 (458)
T ss_dssp CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCSSCSS---CCCCEEEEEEECCSCCCCSSTT
T ss_pred CCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCCchhHHHHhhccCCcc---CCceEEEEEecCCCcccCCCCC
Confidence 356899999999995 57899988652 7788888876543210 1123699999999887554456
Q ss_pred ceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCc-ccHHHHHHHHHHHHhcCCCCcEEEEEEEcCC
Q psy5584 1840 EVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSH-KHFEWFIDVLRDVEKKDVTNVLEIHIFITQF 1918 (2014)
Q Consensus 1840 ~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~-~~l~w~~~~L~~l~~~~~~~~l~v~iyvT~~ 1918 (2014)
.++||||||||||||++++++.......+ ....++.|+|++|+. +++. |.++|+++.+.. ...++++.+++.
T Consensus 307 ~piImIggGTGIAPfrs~lq~r~~l~~~g----~~~~~~~Lf~G~R~~~~D~l-y~dEl~~l~~~g--~l~~l~~a~SRd 379 (458)
T 3qfs_A 307 TPVIMVGPGTGVAPFIGFIQERAWLRQQG----KEVGETLLYYGCRRSDEDYL-YREELAQFHRDG--ALTQLNVAFSRE 379 (458)
T ss_dssp SCEEEECCGGGGHHHHHHHHHHHHHHHHT----CCCCCEEEEEEESCTTTSCT-THHHHHHHHHHT--SSSEEEEEETTS
T ss_pred CceEEEcCCcchhhHHHHHHHHHHHHhcC----CCCCCEEEEEEeCCchHhhh-HHHHHHHHHHcC--CCCEEEEEEECC
Confidence 79999999999999999999864211111 112479999999996 5655 789999987653 334777778875
Q ss_pred CCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeCCh-hhHHHHHHHHHhh
Q psy5584 1919 FHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPR-PLTKSIMSACEEV 1997 (2014)
Q Consensus 1919 ~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCGP~-~m~~~vr~a~~~~ 1997 (2014)
... .. |+... -+-+...+.+-+ . ....||+|||+ .|+++|++++.+.
T Consensus 380 ~~~----k~--yVqd~--------------------l~~~~~~l~~~l-~-----~~~~vYvCGp~~~M~~~V~~~L~~i 427 (458)
T 3qfs_A 380 QSH----KV--YVQHL--------------------LKQDREHLWKLI-E-----GGAHIYVCGDARNMARDVQNTFYDI 427 (458)
T ss_dssp SSS----CC--CHHHH--------------------HHHTHHHHHHHH-H-----TTCEEEEEEETTTHHHHHHHHHHHH
T ss_pred CCC----cc--cHhHH--------------------HHHhHHHHHHHh-c-----CCCEEEEECCCHHHHHHHHHHHHHH
Confidence 321 00 00000 000112222222 2 13469999996 8999999999876
Q ss_pred hc
Q psy5584 1998 NK 1999 (2014)
Q Consensus 1998 ~~ 1999 (2014)
..
T Consensus 428 ~~ 429 (458)
T 3qfs_A 428 VA 429 (458)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 181
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=99.41 E-value=2.7e-13 Score=145.85 Aligned_cols=138 Identities=17% Similarity=0.288 Sum_probs=117.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC--CCCcccHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND--RNGVIDKGELAEMLRSLVEMARTTSLTDS 1290 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D--~dG~Is~eEF~~~l~~~~~~~~~~~~s~~ 1290 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+.+++..+|..+|.| ++|.|+++||..++.......
T Consensus 10 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~-------- 81 (151)
T 1w7j_B 10 EEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR-------- 81 (151)
T ss_dssp -CHHHHHHHHCCSSSSEEESTTHHHHHHHTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----------
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC--------
Confidence 3488999999999999999999999999999999999999999999999 999999999999876521000
Q ss_pred HHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCCh
Q psy5584 1291 QVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370 (2014)
Q Consensus 1291 e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s 1370 (2014)
....
T Consensus 82 ----------------------------------------------------------------------------~~~~ 85 (151)
T 1w7j_B 82 ----------------------------------------------------------------------------GQGT 85 (151)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------------------------------------------------CCCc
Confidence 0001
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
...+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+| |++|.|+.+||..++.
T Consensus 86 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~ 149 (151)
T 1w7j_B 86 YEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHIL 149 (151)
T ss_dssp --CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHh
Confidence 223667899999999999999999999988876778899999999999 9999999999998874
No 182
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.41 E-value=2e-13 Score=145.55 Aligned_cols=136 Identities=16% Similarity=0.133 Sum_probs=84.9
Q ss_pred EEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHHHHHh
Q psy5584 1823 IRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLRDVEK 1902 (2014)
Q Consensus 1823 v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~~l~~ 1902 (2014)
+.|.||||.+... ...+++|||||||||||++|+++++... + .+|+++ ++|+.+++. |.++|+++..
T Consensus 3 ~~v~GP~G~~~~~-~~~~~~llIaGG~GiaPl~sm~~~l~~~---~-------~~v~l~-g~R~~~~~~-~~~el~~l~~ 69 (142)
T 3lyu_A 3 LNVAGPLGTPVPM-EKFGKILAIGAYTGIVEVYPIAKAWQEI---G-------NDVTTL-HVTFEPMVI-LKEELEKAVT 69 (142)
T ss_dssp ----CCCSCCBCC-CCCSEEEEEEETTHHHHHHHHHHHHHHT---T-------CEEEEE-EEEEGGGCC-SHHHHHTTSS
T ss_pred eeeeCCCCCCccC-CCCCeEEEEECcCcHHHHHHHHHHHHhc---C-------CcEEEE-EeCCHHHhh-HHHHHHHHHh
Confidence 5689999998754 4578999999999999999999999754 2 379999 999999987 5677766542
Q ss_pred cCCCCcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeC
Q psy5584 1903 KDVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCG 1982 (2014)
Q Consensus 1903 ~~~~~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCG 1982 (2014)
.+.+..+++......+. .+.|. .||.+ +.+..+..... ...||+||
T Consensus 70 -----~~~~~~~~~~~~~~~~d-------------------~~~g~-----~G~v~--~~l~~~~~~~~---~~~vy~CG 115 (142)
T 3lyu_A 70 -----RHIVEPVPLNPNQDFLA-------------------NMKNV-----SQRLK--EKVRELLESED---WDLVFMVG 115 (142)
T ss_dssp -----EEEEEEECCCTTSCHHH-------------------HHHHH-----HHHHH--HHHHHHHHSSC---CSEEEEES
T ss_pred -----heEEEEeecccccCCCC-------------------CCCCC-----ccchh--HHHHHhcccCC---CCEEEEEC
Confidence 23222222221100000 01111 14433 33444433321 23599999
Q ss_pred ChhhHHHHHHHHHhhhcCCCCCeEEEE
Q psy5584 1983 PRPLTKSIMSACEEVNKGRKLPYFIHH 2009 (2014)
Q Consensus 1983 P~~m~~~vr~a~~~~~~~~g~~~~~~h 2009 (2014)
|++|+++|.+.+++. |++...+|
T Consensus 116 P~~Mm~av~~~l~~~----~~~~~~~~ 138 (142)
T 3lyu_A 116 PVGDQKQVFEVVKEY----GVPMLEHH 138 (142)
T ss_dssp CHHHHHHHHHHHHHH----TCCBC---
T ss_pred CHHHHHHHHHHHHHc----CCchhhhc
Confidence 999999999999998 55655554
No 183
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Probab=99.41 E-value=1.2e-12 Score=146.58 Aligned_cols=149 Identities=20% Similarity=0.282 Sum_probs=118.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHH-----HHHHHhcCCCCHH-----HHHHHHHhccCCCCCcccHHHHHHHHHHHHHhh
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFL-----DTVVLFSRGHTED-----KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1282 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~-----~~l~~l~~~~~ee-----el~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~ 1282 (2014)
..++.+|..+|.|++|.|+.+||. .++..++...+++ +++.+|+.+|.|++|.|+++||..++.......
T Consensus 16 ~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~~~ 95 (191)
T 1uhk_A 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDE 95 (191)
T ss_dssp HHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHHHHHhcch
Confidence 458899999999999999999999 7777777766666 689999999999999999999999876522000
Q ss_pred cCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHH
Q psy5584 1283 RTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA 1362 (2014)
Q Consensus 1283 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~ 1362 (2014)
.... . . .
T Consensus 96 --------------------------------------~~~~--------~-----------~-~--------------- 102 (191)
T 1uhk_A 96 --------------------------------------LEKY--------A-----------K-N--------------- 102 (191)
T ss_dssp --------------------------------------HHHH--------H-----------T-T---------------
T ss_pred --------------------------------------hhhh--------h-----------h-h---------------
Confidence 0000 0 0 0
Q ss_pred HHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1363 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1363 ~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
....-...++.+|..+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++...
T Consensus 103 ---~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~~~~~~~ 174 (191)
T 1uhk_A 103 ---EPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGF 174 (191)
T ss_dssp ---CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHHHH
T ss_pred ---hHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 000011224589999999999999999999999888777788999999999999999999999999998854
No 184
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.40 E-value=2.4e-13 Score=147.83 Aligned_cols=140 Identities=14% Similarity=0.115 Sum_probs=86.8
Q ss_pred CcE-EEEECCCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcccHHHHHHHHH
Q psy5584 1820 QPK-IRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHKHFEWFIDVLR 1898 (2014)
Q Consensus 1820 ~~~-v~IdGPyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~~l~w~~~~L~ 1898 (2014)
+.+ +.|.||||.+... ...++++||||||||||++|+++++... + ++|+|+ ++|+.+++. |.++|+
T Consensus 4 Gd~vl~v~gP~G~~f~~-~~~~~~llIaGG~GItPl~sm~~~l~~~---~-------~~v~l~-g~r~~~d~~-~~~el~ 70 (158)
T 3lrx_A 4 GDSLLNVAGPLGTPVPM-EKFGKILAIGAYTGIVEVYPIAKAWQEI---G-------NDVTTL-HVTFEPMVI-LKEELE 70 (158)
T ss_dssp --------CCCCCCBCC-CCCSEEEEEEETTHHHHHHHHHHHHHHH---T-------CEEEEE-EECBGGGCC-SHHHHH
T ss_pred CCEeeEEECCCCCCCcc-CCCCeEEEEEccCcHHHHHHHHHHHHhc---C-------CcEEEE-EeCCHHHhh-HHHHHH
Confidence 347 5999999997643 3578999999999999999999999754 2 389999 999999987 667787
Q ss_pred HHHhcCCCCcEEEEEE--EcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeE
Q psy5584 1899 DVEKKDVTNVLEIHIF--ITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKI 1976 (2014)
Q Consensus 1899 ~l~~~~~~~~l~v~iy--vT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v 1976 (2014)
++... ++++ ++.... +.. +-+.|. .||.+ +++.++..... ..
T Consensus 71 ~l~~~-------~~~~~v~~~~~~--~~~-----------------~~~~g~-----~G~v~--~~l~~~l~~~~---~~ 114 (158)
T 3lrx_A 71 KAVTR-------HIVEPVPLNPNQ--DFL-----------------ANMKNV-----SQRLK--EKVRELLESED---WD 114 (158)
T ss_dssp HHSSE-------EEECCBCCCTTS--CHH-----------------HHHHHH-----HHHHH--HHHHHHHHHSC---CS
T ss_pred HHHhc-------eEEEEeeccccc--cCC-----------------CCCCCC-----ccccc--HHHHHhhccCC---CC
Confidence 76531 2221 111100 000 001111 14433 23444333322 23
Q ss_pred EEEEeCChhhHHHHHHHHHhhhcCCCCCeEEEEEecC
Q psy5584 1977 GVFSCGPRPLTKSIMSACEEVNKGRKLPYFIHHFENF 2013 (2014)
Q Consensus 1977 ~V~vCGP~~m~~~vr~a~~~~~~~~g~~~~~~h~E~F 2013 (2014)
.||+|||++|++++++.+++. |++ .++|.|.+
T Consensus 115 ~vy~CGP~~mm~~v~~~l~~~----Gv~-~~vslE~~ 146 (158)
T 3lrx_A 115 LVFMVGPVGDQKQVFEVVKEY----GVP-MKVDLHPI 146 (158)
T ss_dssp EEEEESCHHHHHHHHHHHGGG----TCC-EEECC---
T ss_pred EEEEECCHHHHHHHHHHHHHc----CCC-EEEEeeHH
Confidence 699999999999999999887 645 67777754
No 185
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A
Probab=99.40 E-value=1.5e-12 Score=148.17 Aligned_cols=155 Identities=23% Similarity=0.260 Sum_probs=115.5
Q ss_pred cCcCHHHHHHHh---CCCC-cHHHHHHHHHhhcCC--CCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccH
Q psy5584 1195 TSLSRAEFASAL---GMKS-DAVFVRMMFNIVDKD--GDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDK 1268 (2014)
Q Consensus 1195 ~~Ls~~El~~~L---~~~~-~~~~l~~lF~~~D~d--gdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~ 1268 (2014)
+.|+.+|+..+. ++.. ....++.+|..+|.| ++|.|+.+||..++.. .....+..++.+|+.+|.|++|.|++
T Consensus 15 g~l~~~el~~l~~~~~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~f~~~D~d~~g~i~~ 93 (207)
T 2ehb_A 15 RPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR-NRNRRNLFADRIFDVFDVKRNGVIEF 93 (207)
T ss_dssp ------CHHHHHHHSSCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS-CTTCCCHHHHHHHHHHCTTCSSEECH
T ss_pred cccCHHHHHHHHHhCCCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc-cccccHHHHHHHHHHhcCCCCCeEeH
Confidence 456666665533 2322 234578899999999 9999999999999976 33444567788999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcc
Q psy5584 1269 GELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETG 1348 (2014)
Q Consensus 1269 eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G 1348 (2014)
+||..++....
T Consensus 94 ~Ef~~~~~~~~--------------------------------------------------------------------- 104 (207)
T 2ehb_A 94 GEFVRSLGVFH--------------------------------------------------------------------- 104 (207)
T ss_dssp HHHHHHHGGGS---------------------------------------------------------------------
T ss_pred HHHHHHHHHHc---------------------------------------------------------------------
Confidence 99998874311
Q ss_pred cccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH----hcCCcHHH----HHHHHhhhcCC
Q psy5584 1349 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDK----LRIIFDMCDND 1420 (2014)
Q Consensus 1349 ~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~----~~~~~~e~----l~~~F~~~D~D 1420 (2014)
......+.+..+|..+|.|++|.|+.+||..++... ....++++ +..+|+.+|.|
T Consensus 105 -----------------~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d 167 (207)
T 2ehb_A 105 -----------------PSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRK 167 (207)
T ss_dssp -----------------TTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTT
T ss_pred -----------------cCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCC
Confidence 001234568899999999999999999999988632 33344444 46778899999
Q ss_pred CCCeeeHHHHHHHHHH
Q psy5584 1421 RNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1421 gdG~Is~eEf~~~L~~ 1436 (2014)
+||.|+.+||..++..
T Consensus 168 ~dG~I~~~Ef~~~~~~ 183 (207)
T 2ehb_A 168 NDGKIDIDEWKDFVSL 183 (207)
T ss_dssp CSSEECHHHHHHHHHH
T ss_pred CCCcCcHHHHHHHHHh
Confidence 9999999999999985
No 186
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=99.39 E-value=5e-12 Score=138.40 Aligned_cols=134 Identities=16% Similarity=0.262 Sum_probs=116.8
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcC-CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~-~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
..++.+|..+|.|++|.|+.+||..++..++. ..+.+++..+|... +|.|+++||..++....
T Consensus 25 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~------------ 88 (166)
T 2mys_B 25 EDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKL------------ 88 (166)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHh------------
Confidence 45899999999999999999999999999998 89999999999865 79999999998875421
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
......
T Consensus 89 --------------------------------------------------------------------------~~~~~~ 94 (166)
T 2mys_B 89 --------------------------------------------------------------------------KGADPE 94 (166)
T ss_pred --------------------------------------------------------------------------ccCCcH
Confidence 001123
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
..+..+|..+|.|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++..
T Consensus 95 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~ 159 (166)
T 2mys_B 95 DVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH 159 (166)
T ss_pred HHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHh
Confidence 45788999999999999999999999988876788899999999999999999999999999874
No 187
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}
Probab=99.39 E-value=1.4e-12 Score=148.74 Aligned_cols=146 Identities=20% Similarity=0.329 Sum_probs=118.7
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcC--CCCHHHHHHHH-------HhccCCCCCcccHHHHHHHHHHHHHhhc
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--GHTEDKLRIIF-------DMCDNDRNGVIDKGELAEMLRSLVEMAR 1283 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~--~~~eeel~~lF-------~~~D~D~dG~Is~eEF~~~l~~~~~~~~ 1283 (2014)
..++++|..+|.|++|.|+.+||..++..++. ..+++++..+| +.+|.|++|.|+++||..++.......
T Consensus 36 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~~~~~~~~~- 114 (208)
T 2hpk_A 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAE- 114 (208)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHTHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhhh-
Confidence 35899999999999999999999999998877 78899999999 999999999999999999875210000
Q ss_pred CCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHH
Q psy5584 1284 TTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS 1363 (2014)
Q Consensus 1284 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~ 1363 (2014)
.. +..
T Consensus 115 ----------~~------------------------------~~~----------------------------------- 119 (208)
T 2hpk_A 115 ----------RE------------------------------RER----------------------------------- 119 (208)
T ss_dssp ----------HH------------------------------HHH-----------------------------------
T ss_pred ----------hh------------------------------hhc-----------------------------------
Confidence 00 000
Q ss_pred HhCCCChHHH-HHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1364 ALGMKSDAVF-VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1364 ~Lg~~~s~~~-l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
........+ +..+|..+|+|++|.|+.+||..++..+. .+++++..+|+.+|.|+||.|+.+||..++...
T Consensus 120 -~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 191 (208)
T 2hpk_A 120 -RGEPSLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFD--VPQEAAYTFFEKADTDKSGKLERTELVHLFRKF 191 (208)
T ss_dssp -TTCCCHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTT--SCTTHHHHHHHHHCTTCCSSBCHHHHHHHHHHH
T ss_pred -cCChHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 000111223 78899999999999999999999998765 677889999999999999999999999999864
No 188
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=99.38 E-value=1.7e-12 Score=170.64 Aligned_cols=194 Identities=10% Similarity=0.171 Sum_probs=128.6
Q ss_pred CCCEEEEEecCCCCCcccccccCCCCC--CCeEEEEEEe-----------cCCccHHHHhhhccCCCCCCCCCcEEEEEC
Q psy5584 1761 SGQWVRLACTAFKNAAYHSFTLTSAPH--ENFLSCHIKA-----------QGPWTWKLRNYFDPCNFNASEDQPKIRLEG 1827 (2014)
Q Consensus 1761 pGQyv~L~~p~~~~~e~HPFTIaS~p~--~~~l~l~Ir~-----------~G~~T~~L~~~~~~~~~~~~~~~~~v~IdG 1827 (2014)
|.+++.-.+| ....|||||+|+|. ++.+.|.|+. .|..|..|.+....+.. ....+|.|.|
T Consensus 381 p~~~l~~~lp---~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~---~~~~~v~v~~ 454 (618)
T 3qe2_A 381 PIDHLCELLP---RLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGEN---GGRALVPMFV 454 (618)
T ss_dssp CHHHHHHHSC---BCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC--------CCEEEEEE
T ss_pred CHHHHHHhcc---ccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCC---CcceEEEEEE
Confidence 4555443433 45889999999995 4778888754 27788888876442210 1123799999
Q ss_pred CCCCCCCCcCCCceEEEEEeccchhhHHHHHHHHHhccCCCCCCCcCccEEEEEEEeCCcc-cHHHHHHHHHHHHhcCCC
Q psy5584 1828 PFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPSHK-HFEWFIDVLRDVEKKDVT 1906 (2014)
Q Consensus 1828 PyG~~~~~~~~~~~vvlIaGGiGITP~lsiL~~l~~~~~~~~~~~~~~~kV~liW~~R~~~-~l~w~~~~L~~l~~~~~~ 1906 (2014)
|+|.+..+.....++||||||||||||++++++.......+ ....++.|+|++|+.+ ++. |.++|+++.+..
T Consensus 455 p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g----~~~~~~~L~~G~R~~~~D~l-y~~el~~~~~~g-- 527 (618)
T 3qe2_A 455 RKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQG----KEVGETLLYYGCRRSDEDYL-YREELAQFHRDG-- 527 (618)
T ss_dssp ECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTT----CCCCCEEEEEEESCTTTSCT-THHHHHHHHHHT--
T ss_pred ecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcC----CCCCCEEEEEecCCCccccc-hHHHHHHHHhcC--
Confidence 99988765445678999999999999999999987542221 1235899999999984 655 789999987652
Q ss_pred CcEEEEEEEcCCCCCCCcchhhhhhhhcccccccccccccCcccccccCCCCHHHHHHHHHHhCCCCCeEEEEEeCCh-h
Q psy5584 1907 NVLEIHIFITQFFHKFDLRTTMLYICENHFQRLSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPR-P 1985 (2014)
Q Consensus 1907 ~~l~v~iyvT~~~~~~d~~~~~~~~~e~~~~~~~~~~~~tgl~~~~~~GRPd~~~il~~l~~~~~~~~~v~V~vCGP~-~ 1985 (2014)
...++++.+|+.... .. |+... -+-+.+.+.+.+ .. ...||+|||+ +
T Consensus 528 ~l~~l~~a~Srd~~~----k~--yVqd~--------------------l~~~~~~l~~~l-~~-----~a~vYvCGp~~~ 575 (618)
T 3qe2_A 528 ALTQLNVAFSREQSH----KV--YVQHL--------------------LKQDREHLWKLI-EG-----GAHIYVCGDARN 575 (618)
T ss_dssp SSSEEEEEETTSSSS----CC--CHHHH--------------------HHHTHHHHHHHH-HH-----TCEEEEEEETTT
T ss_pred CCcEEEEEEcCCCCC----CC--cHHHH--------------------HHHhHHHHHHHH-hC-----CcEEEEECCchH
Confidence 334788888885321 00 10000 000112222222 21 3469999996 9
Q ss_pred hHHHHHHHHHhhhc
Q psy5584 1986 LTKSIMSACEEVNK 1999 (2014)
Q Consensus 1986 m~~~vr~a~~~~~~ 1999 (2014)
|+++|++++.+...
T Consensus 576 M~~~V~~~L~~i~~ 589 (618)
T 3qe2_A 576 MARDVQNTFYDIVA 589 (618)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999887653
No 189
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}
Probab=99.38 E-value=3.7e-13 Score=147.24 Aligned_cols=135 Identities=25% Similarity=0.395 Sum_probs=109.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++.....
T Consensus 27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~------------ 94 (166)
T 2aao_A 27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNK------------ 94 (166)
T ss_dssp HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCCCHHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHH------------
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh------------
Confidence 34889999999999999999999999999998999999999999999999999999999988633110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.....
T Consensus 95 ---------------------------------------------------------------------------~~~~~ 99 (166)
T 2aao_A 95 ---------------------------------------------------------------------------IERED 99 (166)
T ss_dssp ---------------------------------------------------------------------------HHTTH
T ss_pred ---------------------------------------------------------------------------cccHH
Confidence 00123
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.+..+|..+|.|++|.|+.+||..++... +.+++++..+|+.+|.|++|.|+.+||..++..
T Consensus 100 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~--~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~ 161 (166)
T 2aao_A 100 HLFAAFTYFDKDGSGYITPDELQQACEEF--GVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161 (166)
T ss_dssp HHHHHHHHHCTTCSSSBCHHHHHHHTCC----------CCHHHHHCTTCSSSBCHHHHHHHHC-
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence 47888999999999999999999987654 345677899999999999999999999998864
No 190
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=99.37 E-value=1.2e-12 Score=139.41 Aligned_cols=133 Identities=17% Similarity=0.290 Sum_probs=115.7
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|+|++|.|+.+||..++..++...+.+++..++.. ++|.|+++||..++....
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~------------- 69 (143)
T 3j04_B 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKL------------- 69 (143)
T ss_dssp HHHHHHHTTTCSSCTTCCCHHHHHHHHHHTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTT-------------
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHh-------------
Confidence 458899999999999999999999999999999999999888877 899999999999875421
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.......
T Consensus 70 -------------------------------------------------------------------------~~~~~~~ 76 (143)
T 3j04_B 70 -------------------------------------------------------------------------NGTDPED 76 (143)
T ss_dssp -------------------------------------------------------------------------TSSCCHH
T ss_pred -------------------------------------------------------------------------ccCCcHH
Confidence 0012345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 77 ~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~ 139 (143)
T 3j04_B 77 VIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139 (143)
T ss_dssp HHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHH
T ss_pred HHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHh
Confidence 688889999999999999999999998877778888999999999999999999999999886
No 191
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=99.37 E-value=4.2e-13 Score=150.69 Aligned_cols=134 Identities=28% Similarity=0.434 Sum_probs=115.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++....
T Consensus 10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~------------- 76 (188)
T 1s6i_A 10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLN------------- 76 (188)
T ss_dssp CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSS-------------
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHh-------------
Confidence 3488999999999999999999999999998889999999999999999999999999998763210
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
......
T Consensus 77 --------------------------------------------------------------------------~~~~~~ 82 (188)
T 1s6i_A 77 --------------------------------------------------------------------------KLEREE 82 (188)
T ss_dssp --------------------------------------------------------------------------SSCCCC
T ss_pred --------------------------------------------------------------------------ccCHHH
Confidence 000112
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++..+. .+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 83 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 143 (188)
T 1s6i_A 83 NLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143 (188)
T ss_dssp STHHHHHHTTTTCSSEEEHHHHHHTTTTTT--CCTTHHHHHHHHHCSSSSSEEETTHHHHTTS
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 367899999999999999999999886543 5667899999999999999999999998875
No 192
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}
Probab=99.36 E-value=2.7e-12 Score=142.97 Aligned_cols=131 Identities=18% Similarity=0.282 Sum_probs=110.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|+|++|.|+.+||..++..++. +.+++..+|..+|.|++|.|+++||..++....
T Consensus 39 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g~--~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~------------- 103 (180)
T 3mse_B 39 KYINELFYKLDTNHNGSLSHREIYTVLASVGI--KKWDINRILQALDINDRGNITYTEFMAGCYRWK------------- 103 (180)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTC--CHHHHHHHHHHHCTTCCSEECHHHHHHHHSCCT-------------
T ss_pred HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCC--CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcc-------------
Confidence 56899999999999999999999999998764 478999999999999999999999998763210
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.....
T Consensus 104 ---------------------------------------------------------------------------~~~~~ 108 (180)
T 3mse_B 104 ---------------------------------------------------------------------------NIEST 108 (180)
T ss_dssp ---------------------------------------------------------------------------TC--C
T ss_pred ---------------------------------------------------------------------------cCCHH
Confidence 01123
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCC--------CeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRN--------GVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~Dgd--------G~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++. ....+++++..+|+.+|.|++ |.|+.+||..++.
T Consensus 109 ~~~~~F~~~D~d~~G~I~~~El~~~l~--~~~~~~~~~~~~~~~~d~~~d~~~~~~~~G~i~~~eF~~~l~ 177 (180)
T 3mse_B 109 FLKAAFNKIDKDEDGYISKSDIVSLVH--DKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFKDYML 177 (180)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHTT--TSSCCHHHHHHHHHHHHTC---------CCCBCHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHc--CCCCCHHHHHHHHHHhhhccCcccccccCCeeeHHHHHHHHH
Confidence 578899999999999999999999987 345778889999999999988 9999999999886
No 193
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A
Probab=99.35 E-value=4.6e-12 Score=139.56 Aligned_cols=139 Identities=19% Similarity=0.250 Sum_probs=115.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhc----CCCCHHH-H--------HHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFS----RGHTEDK-L--------RIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~----~~~~eee-l--------~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
..++.+|..+|.|++|.|+.+||..++..++ ...+..+ + +.+|+.+| ++|.|+++||..++....
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~~~~~~~ 83 (174)
T 1q80_A 6 QKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFINSMKEMV 83 (174)
T ss_dssp HHHHHHHHHHCTTCSSEESHHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCCCCCCcEeHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHHHHHHHc
Confidence 4588999999999999999999999999887 7777777 5 46899999 999999999999876532
Q ss_pred HhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHH
Q psy5584 1280 EMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRA 1359 (2014)
Q Consensus 1280 ~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~ 1359 (2014)
.. . ..
T Consensus 84 ~~----~------------------------------------------------------------~~----------- 88 (174)
T 1q80_A 84 KN----P------------------------------------------------------------EA----------- 88 (174)
T ss_dssp TS----T------------------------------------------------------------TC-----------
T ss_pred Cc----c------------------------------------------------------------cH-----------
Confidence 00 0 00
Q ss_pred HHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1360 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1360 Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
.......+..+|..+|+|++|.|+.+||..++... +.+++.+..+|+.+|.|++|.|+.+||..++...
T Consensus 89 -------~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~--g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~ 157 (174)
T 1q80_A 89 -------KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML--GLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDF 157 (174)
T ss_dssp -------HHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHH--TCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred -------HHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHc--CCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHHH
Confidence 00023458889999999999999999999999887 4677889999999999999999999999998753
No 194
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.35 E-value=3.2e-13 Score=150.88 Aligned_cols=95 Identities=15% Similarity=0.283 Sum_probs=74.8
Q ss_pred HHHHHccCCCCceeHHHHHHHHHHHhcC-CcHHHHHHHH--hhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHH
Q psy5584 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRG-HTEDKLRIIF--DMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1453 (2014)
Q Consensus 1377 lf~~~D~DgdG~Isf~EFl~~l~~~~~~-~~~e~l~~~F--~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~ 1453 (2014)
+|..+|.|++|.|+++| .++...... ...+++..+| +.||+|++|.|+.+||+.++..++. .++++++++
T Consensus 70 ~f~~~D~d~dg~I~~~E--~~~~~~~~~~~~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~-----~~~~~~~~~ 142 (186)
T 2hps_A 70 LAPGVRISVEEAAVNAT--DSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGP-----DLTDDKAIT 142 (186)
T ss_dssp CCTTCEEEHHHHHHHHH--HHHHHCCTHHHHHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCT-----TCCHHHHHH
T ss_pred HHHhcCCCCCCcccHHH--HHHHHhcCChHHHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCC-----CCCHHHHHH
Confidence 36889999999999999 444332111 1123455666 8889999999999999999998764 788887655
Q ss_pred HHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1454 LIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1454 li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+|+.+|.|+||+|+|+||+.++...
T Consensus 143 ----~~~~~D~d~dG~i~~~ef~~~~~~~ 167 (186)
T 2hps_A 143 ----CFNTLDFNKNGQISRDEFLVTVNDF 167 (186)
T ss_dssp ----HHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred ----HHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 7888999999999999999999763
No 195
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=99.35 E-value=3.3e-12 Score=138.32 Aligned_cols=140 Identities=16% Similarity=0.320 Sum_probs=118.0
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
..||.+|+++ ++++|..+|+|++|.|+.+||..+++.++...+++++..++. +++|.|++.||..+
T Consensus 8 ~~Lt~~qi~e----------lk~~F~~~D~d~dG~I~~~El~~~l~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~ 73 (153)
T 3i5g_B 8 VKLSQRQMQE----------LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECPGQLNFTAFLTL 73 (153)
T ss_dssp TTCCHHHHHH----------HHHHHHHHCCSTTSCCCHHHHHHHHHHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHT
T ss_pred cCCCHHHHHH----------HHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCccHHHHHHHHH----hccCCccHHHHHHH
Confidence 4678888754 899999999999999999999999999999999988877665 56788999999877
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccc
Q psy5584 1275 LRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT 1354 (2014)
Q Consensus 1275 l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g 1354 (2014)
+....
T Consensus 74 ~~~~~--------------------------------------------------------------------------- 78 (153)
T 3i5g_B 74 FGEKV--------------------------------------------------------------------------- 78 (153)
T ss_dssp TTTTT---------------------------------------------------------------------------
T ss_pred HHhhh---------------------------------------------------------------------------
Confidence 53210
Q ss_pred cccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH
Q psy5584 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434 (2014)
Q Consensus 1355 ~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L 1434 (2014)
....+.+.+...|+.+|+|++|.|+.+|+..++..+....+++++..+++.+|.| ||.|+.+||.+++
T Consensus 79 -----------~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m 146 (153)
T 3i5g_B 79 -----------SGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIK 146 (153)
T ss_dssp -----------TTCCCHHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHH
T ss_pred -----------cccccHHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHh
Confidence 0112345688899999999999999999999998877778889999999999988 9999999999988
Q ss_pred H
Q psy5584 1435 R 1435 (2014)
Q Consensus 1435 ~ 1435 (2014)
+
T Consensus 147 ~ 147 (153)
T 3i5g_B 147 G 147 (153)
T ss_dssp H
T ss_pred c
Confidence 6
No 196
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Probab=99.35 E-value=4.9e-12 Score=146.72 Aligned_cols=153 Identities=18% Similarity=0.300 Sum_probs=118.2
Q ss_pred cCHHHHHHHhC-CCCcHHHHHHHHHhh-cCCCCcceeHHHHHHHHHHh-cCCCCHHHHHHHHHhccCCCCCcccHHHHHH
Q psy5584 1197 LSRAEFASALG-MKSDAVFVRMMFNIV-DKDGDGRISFQEFLDTVVLF-SRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273 (2014)
Q Consensus 1197 Ls~~El~~~L~-~~~~~~~l~~lF~~~-D~dgdG~Is~~EF~~~l~~l-~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~ 1273 (2014)
++.+++..... ...+..+++.++..| +.|++|.|+.+||..++..+ ....+...++.+|+.+|.|++|.|+++||..
T Consensus 47 ~~~~~l~~l~~~~~~s~~ei~~l~~~F~~~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~ 126 (229)
T 3dd4_A 47 HRPEALELLEAQSKFTKKELQILYRGFKNECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIK 126 (229)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHH
T ss_pred CCHHHHHHHHHhcCCCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHH
Confidence 34444444322 123455666676666 57889999999999999885 4456677889999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccccc
Q psy5584 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMR 1353 (2014)
Q Consensus 1274 ~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~ 1353 (2014)
++.....
T Consensus 127 ~l~~~~~------------------------------------------------------------------------- 133 (229)
T 3dd4_A 127 GLSILLR------------------------------------------------------------------------- 133 (229)
T ss_dssp HHHHHHH-------------------------------------------------------------------------
T ss_pred HHHHHcC-------------------------------------------------------------------------
Confidence 8755220
Q ss_pred ccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHH------------hcCCcHHHHHHHHhhhcCCC
Q psy5584 1354 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDMCDNDR 1421 (2014)
Q Consensus 1354 g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~------------~~~~~~e~l~~~F~~~D~Dg 1421 (2014)
....+.+..+|+.+|.|++|.|+++||..++..+ .....++.+..+|+.+|.|+
T Consensus 134 --------------~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~ 199 (229)
T 3dd4_A 134 --------------GTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNK 199 (229)
T ss_dssp --------------SCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSC
T ss_pred --------------CChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCC
Confidence 1234558889999999999999999999998876 23355678999999999999
Q ss_pred CCeeeHHHHHHHHHH
Q psy5584 1422 NGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1422 dG~Is~eEf~~~L~~ 1436 (2014)
||.|+.+||..++..
T Consensus 200 dG~Is~~EF~~~~~~ 214 (229)
T 3dd4_A 200 DGVVTIDEFIESCQK 214 (229)
T ss_dssp SSBCCHHHHHHHHHT
T ss_pred CCcEeHHHHHHHHHh
Confidence 999999999999873
No 197
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...
Probab=99.35 E-value=1e-11 Score=134.37 Aligned_cols=132 Identities=14% Similarity=0.295 Sum_probs=115.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+.+++..+|. +++|.|+++||..++....
T Consensus 18 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~------------- 80 (156)
T 1wdc_B 18 QEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKL------------- 80 (156)
T ss_dssp HHHHHHHHHHCTTCSSSCCHHHHHHHHHHHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHh-------------
Confidence 34899999999999999999999999999999999999999886 5799999999998875421
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.......
T Consensus 81 -------------------------------------------------------------------------~~~~~~~ 87 (156)
T 1wdc_B 81 -------------------------------------------------------------------------SGTDSEE 87 (156)
T ss_dssp -------------------------------------------------------------------------CSCCCHH
T ss_pred -------------------------------------------------------------------------cCCChHH
Confidence 0011345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|.| +|.|+.+||..++.
T Consensus 88 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~ 149 (156)
T 1wdc_B 88 TIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149 (156)
T ss_dssp HHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHH
T ss_pred HHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHh
Confidence 688899999999999999999999998887678889999999999999 99999999999987
No 198
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*
Probab=99.35 E-value=3.5e-12 Score=137.56 Aligned_cols=136 Identities=25% Similarity=0.366 Sum_probs=112.0
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|.|++|.|+.+|| ..+..+... ..+..+|+.+|.|++|.|+++||..++....
T Consensus 6 ~~l~~~F~~~D~d~~G~i~~~el-~~l~~~~~~---~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~------------- 68 (155)
T 3ll8_B 6 KRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFS------------- 68 (155)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHH-TTSGGGTTC---TTHHHHHHHHCTTCSSSBCHHHHHHHHGGGC-------------
T ss_pred HHHHHHHHHhCcCCCCeEcHHHH-HHhhccccc---hHHHHHHHHHCCCCCCcCcHHHHHHHHHHHc-------------
Confidence 56899999999999999999999 555444432 2789999999999999999999998874311
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.......
T Consensus 69 -------------------------------------------------------------------------~~~~~~~ 75 (155)
T 3ll8_B 69 -------------------------------------------------------------------------VKGDKEQ 75 (155)
T ss_dssp -------------------------------------------------------------------------SSCCHHH
T ss_pred -------------------------------------------------------------------------ccCCHHH
Confidence 0012345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHH-HhcCCcHHHHHHHHhh----hcCCCCCeeeHHHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDM----CDNDRNGVIDKGELAEMLRSLV 1438 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~-~~~~~~~e~l~~~F~~----~D~DgdG~Is~eEf~~~L~~l~ 1438 (2014)
.+..+|..+|.|++|.|+.+||..++.. .....+.+++..+|+. +|.|++|.|+.+||..++..++
T Consensus 76 ~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~ 146 (155)
T 3ll8_B 76 KLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLD 146 (155)
T ss_dssp HHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence 6889999999999999999999999988 4666777778888777 9999999999999999998643
No 199
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}
Probab=99.35 E-value=3.9e-12 Score=144.29 Aligned_cols=150 Identities=21% Similarity=0.263 Sum_probs=114.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|.|++|.|+.+||..+ ..++.... +..+|+.+|.|++|.|+++||..++..... ......
T Consensus 29 ~~l~~~F~~~D~d~dG~I~~~El~~~-~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~------~~~~~~ 98 (202)
T 2bec_A 29 LRLHHRFRALDRNKKGYLSRMDLQQI-GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRP------VEDEDT 98 (202)
T ss_dssp HHHHHHHHHHCSSCSSCCCHHHHHTC-HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSC------CCHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHH-HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcc------cchhcc
Confidence 34889999999999999999999998 66554433 899999999999999999999998754210 000000
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
. . . . ... . -.......
T Consensus 99 ~----~----------------~-----------------~---~~~-------~-----------------~~~~~~~~ 114 (202)
T 2bec_A 99 E----T----------------Q-----------------D---PKK-------P-----------------EPLNSRRN 114 (202)
T ss_dssp C---------------------------------------------C-------C-----------------CCTTSHHH
T ss_pred c----c----------------c-----------------c---ccc-------c-----------------cccccHHH
Confidence 0 0 0 0 000 0 00123456
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHH-hcCCcHHHHHHHHhh----hcCCCCCeeeHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTEDKLRIIFDM----CDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~-~~~~~~e~l~~~F~~----~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.+..+|..+|.|++|.|+.+||..++..+ ....+++++..+|+. +|.|+||.|+.+||..++..
T Consensus 115 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (202)
T 2bec_A 115 KLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183 (202)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTT
T ss_pred HHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence 68999999999999999999999999887 666777888888887 99999999999999998874
No 200
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Probab=99.34 E-value=7.2e-12 Score=156.32 Aligned_cols=137 Identities=26% Similarity=0.413 Sum_probs=121.1
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|.|++|.|+.+||..++..++...++++++.+|+.+|.|++|.|+++||..++.....
T Consensus 312 ~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~------------ 379 (450)
T 3sg6_A 312 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMK------------ 379 (450)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC---------------
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhcc------------
Confidence 45899999999999999999999999999999999999999999999999999999999988743110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.....+
T Consensus 380 --------------------------------------------------------------------------~~~~~e 385 (450)
T 3sg6_A 380 --------------------------------------------------------------------------DTDSEE 385 (450)
T ss_dssp -----------------------------------------------------------------------------CHH
T ss_pred --------------------------------------------------------------------------ccchhh
Confidence 011234
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|+.+|.|++|.|+.+||..++.......+++++..+|+.+|.|+||.|+.+||..++.
T Consensus 386 ~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~ 448 (450)
T 3sg6_A 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 448 (450)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC
T ss_pred HHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 578899999999999999999999999988788899999999999999999999999998875
No 201
>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A
Probab=99.33 E-value=1.7e-11 Score=141.88 Aligned_cols=137 Identities=21% Similarity=0.269 Sum_probs=110.7
Q ss_pred HHHHHHHHhhcCC--CCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1213 VFVRMMFNIVDKD--GDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS 1290 (2014)
Q Consensus 1213 ~~l~~lF~~~D~d--gdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~ 1290 (2014)
..++++|..+|.| ++|.|+.+||..++.. .....+..++.+|+.+|.|++|.|+++||..++....
T Consensus 48 ~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~-~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~----------- 115 (226)
T 2zfd_A 48 EALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFH----------- 115 (226)
T ss_dssp HHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTS-----------
T ss_pred HHHHHHHHHhCcccCCCCeEcHHHHHHHHhc-cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHc-----------
Confidence 4478899999999 9999999999999976 3334455678899999999999999999998875421
Q ss_pred HHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCCh
Q psy5584 1291 QVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370 (2014)
Q Consensus 1291 e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s 1370 (2014)
.....
T Consensus 116 ---------------------------------------------------------------------------~~~~~ 120 (226)
T 2zfd_A 116 ---------------------------------------------------------------------------PNAPI 120 (226)
T ss_dssp ---------------------------------------------------------------------------TTSCH
T ss_pred ---------------------------------------------------------------------------cCCCH
Confidence 00123
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHH----hcCCcHHH----HHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHTEDK----LRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~----~~~~~~e~----l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
...+..+|..+|.|++|.|+++||..++... ....++++ +..+|+.+|.|+||.|+.+||..++..
T Consensus 121 ~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~~ 194 (226)
T 2zfd_A 121 DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLR 194 (226)
T ss_dssp HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 4568899999999999999999999998632 33344444 467788999999999999999999985
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.33 E-value=4e-12 Score=164.52 Aligned_cols=136 Identities=21% Similarity=0.367 Sum_probs=113.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHh----cCCCC-------HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHh
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGHT-------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l----~~~~~-------eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~ 1281 (2014)
+.++++|..+|+|+||.|+.+||..++..+ +...+ +++++.+|+.+|.|+||.|+++||..++.....
T Consensus 335 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~- 413 (484)
T 3nyv_A 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKT- 413 (484)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccc-
Confidence 468999999999999999999997766554 33444 788999999999999999999999988754210
Q ss_pred hcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHH
Q psy5584 1282 ARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF 1361 (2014)
Q Consensus 1282 ~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef 1361 (2014)
T Consensus 414 -------------------------------------------------------------------------------- 413 (484)
T 3nyv_A 414 -------------------------------------------------------------------------------- 413 (484)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1362 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1362 ~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
..+.+.+..+|+.+|+|+||.|+.+||..++.. ...+++++..+|+.+|.|+||.|+.+||..++..+
T Consensus 414 ------~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~ 481 (484)
T 3nyv_A 414 ------LLSRERLERAFRMFDSDNSGKISSTELATIFGV--SDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL 481 (484)
T ss_dssp ------HHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH--TTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred ------cCcHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence 012345788999999999999999999999876 45678889999999999999999999999999754
No 203
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.33 E-value=2.9e-12 Score=166.69 Aligned_cols=137 Identities=22% Similarity=0.380 Sum_probs=117.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHh--------cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcC
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLF--------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l--------~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~ 1284 (2014)
..++++|..+|+|+||.|+.+||..++..+ +...++++++.+|+.+|.|+||.|+++||..++....
T Consensus 355 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~----- 429 (504)
T 3q5i_A 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQ----- 429 (504)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHH-----
T ss_pred HHHHHHHHeeCCCCCCeEcHHHHHHHHHHhhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhh-----
Confidence 458999999999999999999999999887 3467789999999999999999999999998763210
Q ss_pred CCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHH
Q psy5584 1285 TSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA 1364 (2014)
Q Consensus 1285 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~ 1364 (2014)
T Consensus 430 -------------------------------------------------------------------------------- 429 (504)
T 3q5i_A 430 -------------------------------------------------------------------------------- 429 (504)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1438 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~ 1438 (2014)
...+.+.+..+|+.+|+|++|.|+.+||..++.. ...+++++..+|+.+|.|+||.|+.+||..++..++
T Consensus 430 --~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 499 (504)
T 3q5i_A 430 --ILFSEERLRRAFNLFDTDKSGKITKEELANLFGL--TSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499 (504)
T ss_dssp --HHTCHHHHHHHHHHHCTTCCSEECHHHHHHHTTC--SCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred --cccCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh--CCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence 0012456888999999999999999999988754 356788999999999999999999999999998654
No 204
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5
Probab=99.31 E-value=6.9e-12 Score=133.02 Aligned_cols=134 Identities=16% Similarity=0.243 Sum_probs=114.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+.+++..+|. |++|.|+++||..++.....
T Consensus 5 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~------------ 68 (140)
T 1ggw_A 5 SPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNG------------ 68 (140)
T ss_dssp TTTHHHHHHTCSSSSSEECHHHHHHHHHHTSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSS------------
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhc------------
Confidence 35789999999999999999999999999998899999999887 89999999999988743110
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
. .......
T Consensus 69 ------------------------------------------------------~------------------~~~~~~~ 76 (140)
T 1ggw_A 69 ------------------------------------------------------F------------------DMPGDPE 76 (140)
T ss_dssp ------------------------------------------------------S------------------SSSCCHH
T ss_pred ------------------------------------------------------c------------------cCcccHH
Confidence 0 0011235
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|. ++|.|+.+||..++.
T Consensus 77 ~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~ 138 (140)
T 1ggw_A 77 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMIL 138 (140)
T ss_dssp HHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHh
Confidence 68889999999999999999999999988777888999999999999 999999999998875
No 205
>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}
Probab=99.31 E-value=2e-12 Score=149.60 Aligned_cols=138 Identities=22% Similarity=0.301 Sum_probs=109.1
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHH-HHHHhcCCCCHHHHHHHHHhc---------cCCCCCcccHHHHHHHHHHHHHhh
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLD-TVVLFSRGHTEDKLRIIFDMC---------DNDRNGVIDKGELAEMLRSLVEMA 1282 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~-~l~~l~~~~~eeel~~lF~~~---------D~D~dG~Is~eEF~~~l~~~~~~~ 1282 (2014)
..++.+|..+|+|++|.|+++||.. ++..++...+.+++..+|..+ |.|++|.|+++||..++......
T Consensus 51 ~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~- 129 (226)
T 2lvv_A 51 SRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVEFLEFRLMLCYI- 129 (226)
T ss_dssp HHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBCHHHHHHHHHHH-
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHHHHHHHHHHHhc-
Confidence 4588999999999999999999999 455556665655555555555 99999999999999864221100
Q ss_pred cCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHH
Q psy5584 1283 RTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA 1362 (2014)
Q Consensus 1283 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~ 1362 (2014)
T Consensus 130 -------------------------------------------------------------------------------- 129 (226)
T 2lvv_A 130 -------------------------------------------------------------------------------- 129 (226)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1363 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1363 ~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
.....+..+|..+|+|++|.|+.+||..++..+.. +...+++..+|+.+|.|+||.|+.+||..++...
T Consensus 130 ------~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF~~~~~~~ 199 (226)
T 2lvv_A 130 ------YDIFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWAVTK 199 (226)
T ss_dssp ------HHHHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHHHHHHHHH
T ss_pred ------cCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 01235788999999999999999999999987632 3344459999999999999999999999999853
No 206
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.31 E-value=2.3e-12 Score=167.10 Aligned_cols=137 Identities=26% Similarity=0.384 Sum_probs=116.0
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcC--------CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcC
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--------GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~--------~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~ 1284 (2014)
..++++|..+|.|+||.|+++||..++..++. ..++++++.+|+.+|.|+||.|+++||..++.....
T Consensus 346 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~---- 421 (494)
T 3lij_A 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS---- 421 (494)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHH----
T ss_pred HHHHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhc----
Confidence 45899999999999999999999999998754 344789999999999999999999999987632100
Q ss_pred CCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHH
Q psy5584 1285 TSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA 1364 (2014)
Q Consensus 1285 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~ 1364 (2014)
T Consensus 422 -------------------------------------------------------------------------------- 421 (494)
T 3lij_A 422 -------------------------------------------------------------------------------- 421 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1438 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~ 1438 (2014)
..+.+.+..+|+.+|+|++|.|+.+||..++.. ...+++++..+|+.+|.|+||.|+.+||..+++.++
T Consensus 422 ---~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~--~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 490 (494)
T 3lij_A 422 ---LLSKDKLESAFQKFDQDGNGKISVDELASVFGL--DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490 (494)
T ss_dssp ---HTCHHHHHHHHHHHCTTCSSEECHHHHHHHC-C--CSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHS
T ss_pred ---cccHHHHHHHHHHHCCCCCCcCCHHHHHHHHHh--cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhc
Confidence 013455888999999999999999999998764 456778899999999999999999999999998654
No 207
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=99.30 E-value=6.1e-12 Score=135.72 Aligned_cols=140 Identities=17% Similarity=0.334 Sum_probs=120.1
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
..++.+++ ..++.+|..+|+|++|.|+.+||..++..++...+.+++..++..+ +|.|+++||..+
T Consensus 8 ~~l~~~~~----------~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~----~g~i~~~eF~~~ 73 (153)
T 2ovk_B 8 VKLSQRQM----------QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKEC----PGQLNFTAFLTL 73 (153)
T ss_dssp TTCCHHHH----------HHHHHHHHHHCCSTTTCCCHHHHHHHTTTTTSCCCHHHHHHHHHHS----SSCCCSHHHHHT
T ss_pred CCCCHHHH----------HHHHHHHHHhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHc----CCCCCHHHHHHH
Confidence 45666665 4489999999999999999999999999999999999999999998 899999999987
Q ss_pred HHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccc
Q psy5584 1275 LRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT 1354 (2014)
Q Consensus 1275 l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g 1354 (2014)
+....
T Consensus 74 ~~~~~--------------------------------------------------------------------------- 78 (153)
T 2ovk_B 74 FGEKV--------------------------------------------------------------------------- 78 (153)
T ss_dssp TTTTT---------------------------------------------------------------------------
T ss_pred HHHHh---------------------------------------------------------------------------
Confidence 63210
Q ss_pred cccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHH
Q psy5584 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434 (2014)
Q Consensus 1355 ~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L 1434 (2014)
........+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+|. ++|.|+.+||..++
T Consensus 79 -----------~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~I~~~eF~~~~ 146 (153)
T 2ovk_B 79 -----------SGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPL-KNKQFNYNKMVDIK 146 (153)
T ss_dssp -----------TTCCCTTHHHHHHHTTCSSCSSCCCHHHHHHHHHHSSSCCCHHHHHHHHHHCCE-ETTEECHHHHHHHH
T ss_pred -----------ccCChHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCC-CCCEEeHHHHHHHH
Confidence 001123457889999999999999999999999988777888999999999999 99999999999998
Q ss_pred H
Q psy5584 1435 R 1435 (2014)
Q Consensus 1435 ~ 1435 (2014)
.
T Consensus 147 ~ 147 (153)
T 2ovk_B 147 G 147 (153)
T ss_dssp H
T ss_pred h
Confidence 7
No 208
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=99.29 E-value=1.2e-11 Score=139.77 Aligned_cols=132 Identities=19% Similarity=0.229 Sum_probs=116.9
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+.+++..++..+ +|.|+++||..++....
T Consensus 57 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~------------- 119 (196)
T 3dtp_E 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRI------------- 119 (196)
T ss_dssp HHHHHHHHHHCCSCSSBCCHHHHHHHHHTTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCC-------------
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHh-------------
Confidence 4589999999999999999999999999999999999999999988 89999999998875411
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.......
T Consensus 120 -------------------------------------------------------------------------~~~~~~~ 126 (196)
T 3dtp_E 120 -------------------------------------------------------------------------AGTDEED 126 (196)
T ss_dssp -------------------------------------------------------------------------CSSCCHH
T ss_pred -------------------------------------------------------------------------cCCCcHH
Confidence 0012345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|.|++|.|+.+||..++ .+....+.+.+..+|+.+|.|+||.|+.+||..+|.
T Consensus 127 ~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~ 188 (196)
T 3dtp_E 127 VIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188 (196)
T ss_dssp HHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHS
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHH
Confidence 68889999999999999999999999 877778889999999999999999999999999886
No 209
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.27 E-value=8.7e-12 Score=126.53 Aligned_cols=104 Identities=19% Similarity=0.404 Sum_probs=90.3
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH---HHhh
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL---VEMA 1441 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l---~~~~ 1441 (2014)
+|..++.++++.++..+|. +|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.+++.+ +.
T Consensus 2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~-- 75 (109)
T 5pal_A 2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGR-- 75 (109)
T ss_dssp GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCC--
T ss_pred CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCC--
Confidence 3456788899999999997 899999999998753 34567889999999999999999999999999987 44
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.+|.+
T Consensus 76 ---~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 5pal_A 76 ---DLNDTETKA----LLAAGDSDHDGKIGADEFAKMVAQ 108 (109)
T ss_dssp ---CCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred ---CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHh
Confidence 788887655 788899999999999999999874
No 210
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}
Probab=99.27 E-value=5.1e-12 Score=145.51 Aligned_cols=155 Identities=17% Similarity=0.228 Sum_probs=116.3
Q ss_pred CcCHHHHHHHhCCCCc---HHHHHHHHHhhcCCCCcceeHHHHHHHHHH-hcCCCCHHHHHHHHH----h----c-cCCC
Q psy5584 1196 SLSRAEFASALGMKSD---AVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFD----M----C-DNDR 1262 (2014)
Q Consensus 1196 ~Ls~~El~~~L~~~~~---~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~-l~~~~~eeel~~lF~----~----~-D~D~ 1262 (2014)
.++.+++...+....+ ...++.+|..+|.|++|.|+.+||..++.. ++...+.+++..++. . + |.|+
T Consensus 28 ~~~~~~l~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 107 (219)
T 3cs1_A 28 KEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLEN 107 (219)
T ss_dssp HHHHHHHHHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCC
Confidence 3444444444432222 245789999999999999999999999987 565555444444333 2 2 3489
Q ss_pred CCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccc
Q psy5584 1263 NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRR 1342 (2014)
Q Consensus 1263 dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~ 1342 (2014)
+|.|+++||..++......
T Consensus 108 ~g~I~~~EF~~~~~~~~~~------------------------------------------------------------- 126 (219)
T 3cs1_A 108 KGSEDFVEFLEFRLMLCYI------------------------------------------------------------- 126 (219)
T ss_dssp SCCCSSBCHHHHHHHHHHH-------------------------------------------------------------
T ss_pred CCcCCHHHHHHHHHHHhcc-------------------------------------------------------------
Confidence 9999999999876431100
Q ss_pred cCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCC
Q psy5584 1343 RDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDR 1421 (2014)
Q Consensus 1343 d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~Dg 1421 (2014)
.....+..+|..+|.|++|.|+.+||..++..+.. ..+.+++..+|+.+|.|+
T Consensus 127 --------------------------~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~ 180 (219)
T 3cs1_A 127 --------------------------YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNG 180 (219)
T ss_dssp --------------------------HHHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTS
T ss_pred --------------------------chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCC
Confidence 01234788999999999999999999999988765 566677999999999999
Q ss_pred CCeeeHHHHHHHHHHH
Q psy5584 1422 NGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1422 dG~Is~eEf~~~L~~l 1437 (2014)
+|.|+.+||..++...
T Consensus 181 dG~I~~~EF~~~~~~~ 196 (219)
T 3cs1_A 181 TGSVTFDEFAAWASAV 196 (219)
T ss_dssp SSEEEHHHHHHHHHHH
T ss_pred CCcEeHHHHHHHHHHh
Confidence 9999999999998753
No 211
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.27 E-value=5.1e-12 Score=163.55 Aligned_cols=138 Identities=23% Similarity=0.374 Sum_probs=99.0
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHh----cCCC----------CHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH----------TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l----~~~~----------~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
..++++|..+|+|+||.|+.+||..++..+ +... .+++++.+|+.+|.|+||.|+++||..++...
T Consensus 331 ~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~ 410 (486)
T 3mwu_A 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDR 410 (486)
T ss_dssp HHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCT
T ss_pred HHHHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhh
Confidence 568999999999999999999997766553 3333 38899999999999999999999998765220
Q ss_pred HHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccH
Q psy5584 1279 VEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSR 1358 (2014)
Q Consensus 1279 ~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~ 1358 (2014)
T Consensus 411 -------------------------------------------------------------------------------- 410 (486)
T 3mwu_A 411 -------------------------------------------------------------------------------- 410 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1359 AEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1359 ~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
....+.+.+..+|+.+|+|+||.|+.+||..++.......+++++..+|+.+|.|+||.|+.+||..++..+
T Consensus 411 -------~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~ 482 (486)
T 3mwu_A 411 -------TILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNF 482 (486)
T ss_dssp -------TTTCCHHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHH
T ss_pred -------hccchHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 011234568889999999999999999999999887666778889999999999999999999999999864
No 212
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.27 E-value=1e-11 Score=125.93 Aligned_cols=106 Identities=16% Similarity=0.333 Sum_probs=90.5
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
+|..++..+++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.+++.++. .+.
T Consensus 3 lg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~- 76 (109)
T 1bu3_A 3 FSGILADADVAAALKACE--AADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSA-GAR- 76 (109)
T ss_dssp CSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHST-TCC-
T ss_pred ccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHc--ChhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcc-cCC-
Confidence 678899999999999998 8999999999998743 2356778999999999999999999999999998720 011
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.++.
T Consensus 77 ~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~ 108 (109)
T 1bu3_A 77 ALTDAETKA----FLKAGDSDGDGAIGVDEWAALVK 108 (109)
T ss_dssp CCCHHHHHH----HHHHHCTTCSSEECHHHHHHHHT
T ss_pred CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHh
Confidence 788887655 78889999999999999999875
No 213
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.27 E-value=3.5e-12 Score=129.46 Aligned_cols=106 Identities=18% Similarity=0.373 Sum_probs=90.1
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
+|..++.++++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.++..++. .+.
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-~~~- 76 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSS-SAR- 76 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCT-TSC-
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhc-ccc-
Confidence 566788999999999998 7999999999998754 3456788999999999999999999999999987620 011
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.+++
T Consensus 77 ~~~~~~~~~----~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 77 VLTSAETKA----FLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp CCCHHHHHH----HHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHh
Confidence 788887655 78889999999999999999885
No 214
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A
Probab=99.26 E-value=9.2e-12 Score=138.93 Aligned_cols=139 Identities=19% Similarity=0.256 Sum_probs=110.0
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHh------cCCCCHHHHHHH---------HHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLF------SRGHTEDKLRII---------FDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l------~~~~~eeel~~l---------F~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|+|++|.|+.+||..++..+ +...+++++..+ |+.+|.|++|.|+++| .++..
T Consensus 14 ~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~~E--~~~~~ 91 (186)
T 2hps_A 14 RKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNAT--DSLLK 91 (186)
T ss_dssp HHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHHHH--HHHHH
T ss_pred HHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccHHH--HHHHH
Confidence 458999999999999999999999999876 555667778777 7999999999999999 44432
Q ss_pred HHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCccccccccccc
Q psy5584 1278 LVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357 (2014)
Q Consensus 1278 ~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls 1357 (2014)
... ...
T Consensus 92 ~~~--------~~~------------------------------------------------------------------ 97 (186)
T 2hps_A 92 MKG--------EEK------------------------------------------------------------------ 97 (186)
T ss_dssp CCT--------HHH------------------------------------------------------------------
T ss_pred hcC--------ChH------------------------------------------------------------------
Confidence 100 000
Q ss_pred HHHHHHHhCCCChHHHHHHHH--HHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1358 RAEFASALGMKSDAVFVRMMF--NIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1358 ~~Ef~~~Lg~~~s~~~l~~lf--~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
....+...| ..+|.|++|.|+++||..++.......+++++..+|+.+|.|++|.|+.+||..++.
T Consensus 98 ------------~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~ef~~~~~ 165 (186)
T 2hps_A 98 ------------AMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165 (186)
T ss_dssp ------------HHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred ------------HHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHH
Confidence 000111222 445999999999999999999887668889999999999999999999999999998
Q ss_pred HHHH
Q psy5584 1436 SLVE 1439 (2014)
Q Consensus 1436 ~l~~ 1439 (2014)
.+..
T Consensus 166 ~~~~ 169 (186)
T 2hps_A 166 DFLF 169 (186)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 7653
No 215
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.25 E-value=7.5e-12 Score=126.95 Aligned_cols=107 Identities=15% Similarity=0.350 Sum_probs=89.8
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
+|..++..+++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.+++.++. .+.
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~- 75 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSS-DAR- 75 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCT-TCC-
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhc--CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhc-cCC-
Confidence 455678889999999998 8999999999998743 2356788999999999999999999999999998721 011
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.++.+
T Consensus 76 ~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~ 108 (109)
T 1rwy_A 76 DLSAKETKT----LMAAGDKDGDGKIGVEEFSTLVAE 108 (109)
T ss_dssp CCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred CCCHHHHHH----HHHHHCCCCCCcCCHHHHHHHHHc
Confidence 688887555 788899999999999999998864
No 216
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}
Probab=99.24 E-value=2.1e-11 Score=135.61 Aligned_cols=82 Identities=23% Similarity=0.396 Sum_probs=75.0
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhc---CCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVD---KDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D---~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF 1271 (2014)
|.|+.+||..+||..++...+..+|..+| .+++|.|+++||..++..+.....+++++.+|+.+|.|+||+|+.+||
T Consensus 41 G~I~~~el~~~lg~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El 120 (179)
T 3a8r_A 41 GVLLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEV 120 (179)
T ss_dssp TBEEGGGHHHHHTCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHHHHHHCCCHHHHHHHHHHHHCTTCSSCBCHHHH
T ss_pred CCCcHHHHHHHHCCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHHHHHcCCCHHHHHHHHHHHHCCCCCCcCCHHHH
Confidence 89999999999999999889999999988 578899999999999887766667889999999999999999999999
Q ss_pred HHHHH
Q psy5584 1272 AEMLR 1276 (2014)
Q Consensus 1272 ~~~l~ 1276 (2014)
..++.
T Consensus 121 ~~~l~ 125 (179)
T 3a8r_A 121 KEIIA 125 (179)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99986
No 217
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.24 E-value=8.6e-12 Score=126.34 Aligned_cols=105 Identities=20% Similarity=0.366 Sum_probs=89.1
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
+|. ++.++++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.+++.++. .+.
T Consensus 3 lG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~- 75 (108)
T 2pvb_A 3 FAG-LKDADVAAALAACS--AADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSP-SAR- 75 (108)
T ss_dssp CTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTG--GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCT-TSC-
T ss_pred cCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhC--ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhc-cCC-
Confidence 677 89999999999998 7899999999998743 2356788999999999999999999999999987620 011
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.+++++++. +|+.+|.|+||.|+|+||+.++.
T Consensus 76 ~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 76 ALTDAETKA----FLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp CCCHHHHHH----HHHHHCTTCSSSBCHHHHHHHHH
T ss_pred CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHh
Confidence 688887655 78889999999999999999875
No 218
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A
Probab=99.23 E-value=3.3e-11 Score=137.37 Aligned_cols=149 Identities=17% Similarity=0.257 Sum_probs=111.2
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++.+|..+|.|++|.|+.+||..++ .++..... ..+|+.+|.|++|.|+++||..++..... .....
T Consensus 29 ~~l~~~F~~~D~d~dG~Is~~El~~~~-~lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~------~~~~~- 97 (208)
T 2ct9_A 29 TRLYSRFTSLDKGENGTLSREDFQRIP-ELAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRP------IEDNE- 97 (208)
T ss_dssp HHHHHHHHHHCTTCSSEECTGGGGGCH-HHHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSC------CC----
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhcc------ccchh-
Confidence 458889999999999999999999965 44444333 46799999999999999999998754210 00000
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
..... ...+ .......
T Consensus 98 -~~~~~----------------------------------------------~~~~-----------------~~~~~~~ 113 (208)
T 2ct9_A 98 -KSKDV----------------------------------------------NGPE-----------------PLNSRSN 113 (208)
T ss_dssp -------------------------------------------------------C-----------------CTTSHHH
T ss_pred -hhccc----------------------------------------------cccc-----------------ccccHHH
Confidence 00000 0000 0112456
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHH-hcCCcHHHHHHH----HhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTEDKLRII----FDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~-~~~~~~e~l~~~----F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.+..+|..+|.|++|.|+.+||..++... ....+++++..+ |+.+|.|+||.|+.+||..++..
T Consensus 114 ~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~EF~~~~~~ 182 (208)
T 2ct9_A 114 KLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182 (208)
T ss_dssp HHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHHHHHTTTT
T ss_pred HHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 78999999999999999999999999886 556777777777 99999999999999999998874
No 219
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Probab=99.23 E-value=6e-11 Score=132.12 Aligned_cols=141 Identities=16% Similarity=0.264 Sum_probs=114.9
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcC-----CC-C--cceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCc-
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDK-----DG-D--GRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV- 1265 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~-----dg-d--G~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~- 1265 (2014)
..++.+|+.+ ++++|..+|. |+ + |.|+.+||.. +..++...+.+ .+|+.+|.|++|.
T Consensus 12 ~~ls~~~~~~----------l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l~~~g~~~~~~---~l~~~~D~d~~G~~ 77 (183)
T 1dgu_A 12 TFLTKQEILL----------AHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFKE---RICRVFSTSPAKDS 77 (183)
T ss_dssp CSCCHHHHHH----------HHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-STTSSSCTTHH---HHHHHHSCSSSSCC
T ss_pred cCCCHHHHHH----------HHHHHHHhCccccccccccccCcCcHHHHHH-HHhhhcCcHHH---HHHHHhCCCCCCCE
Confidence 4677777744 7899999999 68 8 9999999999 77777666554 5788899999999
Q ss_pred ccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCC
Q psy5584 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDD 1345 (2014)
Q Consensus 1266 Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d 1345 (2014)
|+++||..++....
T Consensus 78 I~~~EF~~~~~~~~------------------------------------------------------------------ 91 (183)
T 1dgu_A 78 LSFEDFLDLLSVFS------------------------------------------------------------------ 91 (183)
T ss_dssp CCHHHHHHHHHHHS------------------------------------------------------------------
T ss_pred ecHHHHHHHHHHhc------------------------------------------------------------------
Confidence 99999999875421
Q ss_pred CcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-----CCcHHHHHH----HHhh
Q psy5584 1346 ETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLRI----IFDM 1416 (2014)
Q Consensus 1346 ~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-----~~~~e~l~~----~F~~ 1416 (2014)
........+..+|..+|.|++|.|+.+||..++..+.. ..+++++.. +|+.
T Consensus 92 --------------------~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (183)
T 1dgu_A 92 --------------------DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEE 151 (183)
T ss_dssp --------------------TTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHH
Confidence 00122346888999999999999999999999987755 345566664 9999
Q ss_pred hcCCCCCeeeHHHHHHHHH
Q psy5584 1417 CDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1417 ~D~DgdG~Is~eEf~~~L~ 1435 (2014)
+|.|++|.|+.+||..++.
T Consensus 152 ~D~d~dG~I~~~EF~~~~~ 170 (183)
T 1dgu_A 152 SDIDRDGTINLSEFQHVIS 170 (183)
T ss_dssp HCTTSSSEEEHHHHHHHHC
T ss_pred hCCCCCCeEcHHHHHHHHH
Confidence 9999999999999999886
No 220
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.23 E-value=6.1e-12 Score=127.81 Aligned_cols=108 Identities=20% Similarity=0.376 Sum_probs=90.8
Q ss_pred HhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcC
Q psy5584 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443 (2014)
Q Consensus 1364 ~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~ 1443 (2014)
++|..++..+++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.++..++. .+.
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~ 76 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAA-DGR 76 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCT-TCC
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhh-cCC
Confidence 3677788999999999998 8899999999998742 3456788999999999999999999999999987621 011
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1444 ~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.+++++++. +|+.+|.|++|.|+|+||+.++.+
T Consensus 77 -~~~~~~~~~----~~~~~d~~~dg~i~~~eF~~~~~~ 109 (110)
T 1pva_A 77 -DLTDAETKA----FLKAADKDGDGKIGIDEFETLVHE 109 (110)
T ss_dssp -CCCHHHHHH----HHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred -CCCHHHHHH----HHHHhCCCCCCeEcHHHHHHHHHh
Confidence 678887555 788899999999999999998864
No 221
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A
Probab=99.22 E-value=7.1e-11 Score=126.22 Aligned_cols=130 Identities=12% Similarity=0.101 Sum_probs=113.7
Q ss_pred HHHHHHHhhcCCC-CcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1214 FVRMMFNIVDKDG-DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1214 ~l~~lF~~~D~dg-dG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
.++.+|..+|.|+ +|.|+.+||..++..++...+.+++..+|..+|.| |+++||..++....
T Consensus 15 ~l~~~F~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~------------- 77 (146)
T 2qac_A 15 DESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICV------------- 77 (146)
T ss_dssp CHHHHHHHHHHHCBTTBEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHhCccCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHh-------------
Confidence 4789999999999 99999999999999999999999999999999998 99999998875410
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
.......
T Consensus 78 -------------------------------------------------------------------------~~~~~~~ 84 (146)
T 2qac_A 78 -------------------------------------------------------------------------HDKDNVE 84 (146)
T ss_dssp -------------------------------------------------------------------------CTTCCHH
T ss_pred -------------------------------------------------------------------------cCcchHH
Confidence 0011345
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
.+..+|..+|+|++|.|+.+||..++..+....+++++..+|+.+ |++|.|+.+||..++.
T Consensus 85 ~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~ 145 (146)
T 2qac_A 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL 145 (146)
T ss_dssp HHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence 688899999999999999999999998877678888999999999 9999999999998874
No 222
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.20 E-value=1.3e-11 Score=124.97 Aligned_cols=106 Identities=21% Similarity=0.295 Sum_probs=88.5
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
|+..++..+++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.+++.++. .+.
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~- 75 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS-DAR- 75 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT-TSC-
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh-ccC-
Confidence 455678889999999998 8999999999998742 2356778999999999999999999999999987621 011
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.++++++++ +|+.+|.|+||.|+|+||+.++.
T Consensus 76 ~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 1rro_A 76 ELTESETKS----LMDAADNDGDGKIGADEFQEMVH 107 (108)
T ss_dssp CCCHHHHHH----HHHHHCCSSSSSEEHHHHHHHHT
T ss_pred CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHc
Confidence 678887555 78889999999999999999875
No 223
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=99.19 E-value=5.5e-11 Score=136.33 Aligned_cols=153 Identities=14% Similarity=0.221 Sum_probs=115.5
Q ss_pred ccCcCHHHHHHHhCC-CCcHHHH---HHHHHhhcC-----CC-C--cceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC
Q psy5584 1194 RTSLSRAEFASALGM-KSDAVFV---RMMFNIVDK-----DG-D--GRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND 1261 (2014)
Q Consensus 1194 ~~~Ls~~El~~~L~~-~~~~~~l---~~lF~~~D~-----dg-d--G~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D 1261 (2014)
...++.+++.+.... ..+..++ .+.|..+|. |+ + |.|+.+||.. +..++..... ..+|+.+|.|
T Consensus 28 ~s~l~~e~l~~l~~~t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l~~lg~~~~~---~~lf~~~D~d 103 (214)
T 2l4h_A 28 GSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-LPELKANPFK---ERICRVFSTS 103 (214)
T ss_dssp ---CCHHHHHHHHSCCSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-CHHHHTSTTH---HHHHHHHCCS
T ss_pred cCCCCHHHHHHHHHhCCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-hhccCCChHH---HHHHHHhCcC
Confidence 356888888775532 3444444 455667776 55 6 9999999999 7777666554 4579999999
Q ss_pred CCCc-ccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCc
Q psy5584 1262 RNGV-IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEK 1340 (2014)
Q Consensus 1262 ~dG~-Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~ 1340 (2014)
++|. |+++||..++....
T Consensus 104 ~dG~~I~f~EF~~~~~~~~------------------------------------------------------------- 122 (214)
T 2l4h_A 104 PAKDSLSFEDFLDLLSVFS------------------------------------------------------------- 122 (214)
T ss_dssp SSCCSEEHHHHHHHHHHTS-------------------------------------------------------------
T ss_pred CCCCEecHHHHHHHHHHHc-------------------------------------------------------------
Confidence 9999 99999998875411
Q ss_pred cccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-----CCcHHHHH----
Q psy5584 1341 RRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLR---- 1411 (2014)
Q Consensus 1341 ~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-----~~~~e~l~---- 1411 (2014)
......+.+..+|+.+|.|++|.|+.+||..++..+.. ..+++++.
T Consensus 123 -------------------------~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~ 177 (214)
T 2l4h_A 123 -------------------------DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLID 177 (214)
T ss_dssp -------------------------SCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHH
T ss_pred -------------------------CCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHH
Confidence 00122446888999999999999999999999987754 44555555
Q ss_pred HHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1412 IIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1412 ~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
.+|+.+|.|+||.|+.+||..++..
T Consensus 178 ~~~~~~D~d~dG~Is~~EF~~~~~~ 202 (214)
T 2l4h_A 178 NILEESDIDRDGTINLSEFQHVISR 202 (214)
T ss_dssp HHHHHHCCSCCSSBCSHHHHHHHHT
T ss_pred HHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 4999999999999999999999873
No 224
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.19 E-value=7.2e-12 Score=164.27 Aligned_cols=136 Identities=12% Similarity=0.224 Sum_probs=64.8
Q ss_pred HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFRE 1327 (2014)
Q Consensus 1248 eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~ 1327 (2014)
+.+++.+|+.+|.|+||.|+++||..+++.
T Consensus 10 e~~l~~~F~~fD~d~dG~Is~~El~~~l~~-------------------------------------------------- 39 (624)
T 1djx_A 10 QHWIHSCLRKADKNKDNKMNFKELKDFLKE-------------------------------------------------- 39 (624)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHH--------------------------------------------------
Confidence 456888999999999999999999988754
Q ss_pred HHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcH
Q psy5584 1328 AYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTE 1407 (2014)
Q Consensus 1328 ~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~ 1407 (2014)
+|..++.++++.+|+.+|.|++|.|+|+||+.++..+.. +
T Consensus 40 -------------------------------------lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---~ 79 (624)
T 1djx_A 40 -------------------------------------LNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---R 79 (624)
T ss_dssp -----------------------------------------------------------------CTTHHHHHHTC---C
T ss_pred -------------------------------------cCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---H
Confidence 234456677899999999999999999999999887643 4
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHH-HHhhcCCC-CCHHHHHHHHHHHHHHcCCC----CCCcccHHHHHHHHHh
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL-VEMARTTS-LTDSQVTELIDGMFQDAGLD----SKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l-~~~~~~~~-ls~~e~~~li~~if~~~D~d----~dG~Is~eEF~~~l~~ 1481 (2014)
++++.+|+.||++ +|.|+.+||+++|... ++ . ++++++++ |++++|.| ++|.|+|+||..+|..
T Consensus 80 ~el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge-----~~ls~ee~~~----ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 80 AEIDRAFEEAAGS-AETLSVERLVTFLQHQQRE-----EEAGPALALS----LIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp HHHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCC-----SSCSHHHHHH----HHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HHHHHHHHHhcCC-CCeecHHHHHHHHHHHhCC-----CCCCHHHHHH----HHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 6799999999986 9999999999999853 22 4 78877655 77789998 7999999999999986
Q ss_pred Cc
Q psy5584 1482 YK 1483 (2014)
Q Consensus 1482 ~~ 1483 (2014)
..
T Consensus 150 ~~ 151 (624)
T 1djx_A 150 AD 151 (624)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 225
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=99.17 E-value=1.5e-11 Score=131.64 Aligned_cols=105 Identities=14% Similarity=0.248 Sum_probs=59.4
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhc-----CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhh----cCC
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA----RTT 1444 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-----~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~----~~~ 1444 (2014)
...+|..+|.|++|.|+++||+..+..... ...+++++.+|+.||+|+||+|+.+||+.++..++... +.
T Consensus 29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~- 107 (143)
T 3a4u_B 29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAP- 107 (143)
T ss_dssp ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCC-
Confidence 456889999999999999999988876532 24567899999999999999999999999998764210 11
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l 1479 (2014)
.++++++.++++.+|+.+|.|+||.|+|+||+.+|
T Consensus 108 ~~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~ 142 (143)
T 3a4u_B 108 LMSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL 142 (143)
T ss_dssp -CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence 68999999999999999999999999999999876
No 226
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.16 E-value=3.1e-11 Score=167.22 Aligned_cols=132 Identities=20% Similarity=0.296 Sum_probs=111.6
Q ss_pred HHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREA 1328 (2014)
Q Consensus 1249 eel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~ 1328 (2014)
++++.+|+.+|.|+||.|+.+||..++..
T Consensus 725 ~~~~~~F~~~D~d~~G~I~~~El~~~l~~--------------------------------------------------- 753 (863)
T 1sjj_A 725 NEFRASFNHFDRKKTGMMDCEDFRACLIS--------------------------------------------------- 753 (863)
T ss_dssp HHHHHHHTTTCSSSSSEEESTTHHHHHHH---------------------------------------------------
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHH---------------------------------------------------
Confidence 56788999999999999999999988755
Q ss_pred HHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcH
Q psy5584 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTE 1407 (2014)
Q Consensus 1329 f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~ 1407 (2014)
+|..++..+++.+|..+|.|++|.|+|+||+.++..... ....
T Consensus 754 ------------------------------------~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~ 797 (863)
T 1sjj_A 754 ------------------------------------MGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTA 797 (863)
T ss_dssp ------------------------------------HTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTTCSSS
T ss_pred ------------------------------------cCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCH
Confidence 345566778999999999999999999999999877643 3556
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCC-----CCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD-----SKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d-----~dG~Is~eEF~~~l~~~ 1482 (2014)
+.++.+|+.| .|++|+|+.+||+.++. +++ ++.+|+.+|.+ +||.|+|+||+.+|...
T Consensus 798 ~~l~~aF~~~-~d~~G~Is~~El~~~l~------------~~~----~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~ 860 (863)
T 1sjj_A 798 DQVMASFKIL-AGDKNYITVDELRRELP------------PDQ----AEYCIARMAPYNGRDAVPGALDYMSFSTALYGE 860 (863)
T ss_dssp HHHHHHHHGG-GTSSSEEEHHHHHHHSC------------HHH----HHHHHHHSEECCSSCCCTTEEESHHHHHHHSCC
T ss_pred HHHHHHHHHH-hCCCCcCcHHHHHHHCC------------HHH----HHHHHHHcchhcCCCCCCCceeHHHHHHHHhcC
Confidence 7899999999 89999999999999873 333 45578889887 69999999999999876
Q ss_pred cc
Q psy5584 1483 KG 1484 (2014)
Q Consensus 1483 ~~ 1484 (2014)
++
T Consensus 861 ~~ 862 (863)
T 1sjj_A 861 SD 862 (863)
T ss_dssp SC
T ss_pred CC
Confidence 54
No 227
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=99.15 E-value=1.5e-11 Score=130.30 Aligned_cols=101 Identities=14% Similarity=0.168 Sum_probs=65.5
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhc-CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH-HhhcCCCCCHHHH
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV-EMARTTSLTDSQV 1451 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~-~~~~~~~ls~~e~ 1451 (2014)
++++|..+|.|++|.|+|+||+.++..... ....++++.+|+.+|+|++|.|+.+||+.+++.++ . .++++++
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~-----~~~~~e~ 79 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIE-----GMSKEDA 79 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCC-----CCCHHHH
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCC-----CCCHHHH
Confidence 578999999999999999999998875322 23457899999999999999999999999998765 3 6888876
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1452 TELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1452 ~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
++ +|+.+|.|+||.|+|+||+.+|.+..
T Consensus 80 ~~----~~~~~D~d~dG~I~~~EF~~~~~~~~ 107 (135)
T 3h4s_E 80 QG----MVREGDLDGDGALNQTEFCVLMVRLS 107 (135)
T ss_dssp HH----HHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred HH----HHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence 55 78889999999999999999998754
No 228
>1d2v_A Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide; HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP: a.93.1.2 PDB: 1cxp_A* 1d5l_A* 1d7w_A* 1dnu_A* 1dnw_A* 4dl1_A* 3zs1_A* 3f9p_A* 1mhl_A* 1myp_A* 3zs0_A*
Probab=99.12 E-value=3.2e-12 Score=127.12 Aligned_cols=90 Identities=17% Similarity=0.204 Sum_probs=63.5
Q ss_pred Cccccccccccccccccccccccc--ccccccCCCCccc-----cccccCCccccccccCCCCccccccccccCCcccCC
Q psy5584 337 SKANLAVGTVDKMAVREWLHANHK--RFVKIRLGPETCL-----HTVDRKGEKLRTVNFKNCDTVTIEESQFSTNREFQH 409 (2014)
Q Consensus 337 ~~~~~~~gs~n~~~~~~~~~a~~~--~~~~~~~~~~~~~-----~~~~~~g~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 409 (2014)
.+.|+.||+|||+.+|.||+|+++ |.+.+.+.+.... ++.+.+|..||++ +.|+.......+....++
T Consensus 5 ~~yRt~DG~cNNl~~P~~G~a~t~f~R~lpp~Y~DG~~~p~~~~~~~~~~g~~lP~p-----R~VS~~l~~~~~~~~~~~ 79 (104)
T 1d2v_A 5 DKYRTITGMCNNRRSPTLGASNRAFVRWLPAEYEDGFSLPYGWTPGVKRNGFPVALA-----RAVSNEIVRFPTDQLTPD 79 (104)
T ss_dssp CSSCCSSCTTSSSSSTTTTCSSEECBCSSCCCCTTSSSCCTTSSTTCCBTTBCCCCH-----HHHHHHHTCCCGGGCCEE
T ss_pred CCccCCCCCccCCCCCccCcCCCccccccCcccccCcccccccccccccCCCcCCCH-----HHHHHHHHhcccccCCCC
Confidence 468999999999999999999987 4444333322112 2344556666655 688864332222234567
Q ss_pred CCCceeeeecCcccccccccccCC
Q psy5584 410 QAKTSIEDFYGDGQVVSSEIVMAS 433 (2014)
Q Consensus 410 ~~~t~~~~~fg~gq~i~hDi~~~~ 433 (2014)
.+.|+|+|+|| |||+|||++|+
T Consensus 80 ~~~t~~~~~wg--Qfi~HDl~~t~ 101 (104)
T 1d2v_A 80 QERSLMFMQWG--QLLDHDLDFTP 101 (104)
T ss_dssp EEEEHHHHHHH--HHHHHHHCCCC
T ss_pred CchHHHHHHHH--HHHHhhHhhcC
Confidence 88999999999 99999999986
No 229
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Probab=99.11 E-value=2.4e-10 Score=115.75 Aligned_cols=106 Identities=22% Similarity=0.326 Sum_probs=90.2
Q ss_pred HhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcC
Q psy5584 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284 (2014)
Q Consensus 1205 ~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~ 1284 (2014)
.||..++..+++.+|..+| ++|.|+++||..++... ....++++.+|+.+|.|++|.|+.+||..++..+.
T Consensus 2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----- 72 (109)
T 1bu3_A 2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFS----- 72 (109)
T ss_dssp CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHS-----
T ss_pred cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHc-----
Confidence 3677888999999999999 89999999999988542 35688999999999999999999999999886521
Q ss_pred CCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHH
Q psy5584 1285 TSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA 1364 (2014)
Q Consensus 1285 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~ 1364 (2014)
.
T Consensus 73 -------------------------------------------------------------------------------~ 73 (109)
T 1bu3_A 73 -------------------------------------------------------------------------------A 73 (109)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l 1398 (2014)
.|..++..+++.++..+|.|++|.|+|+||+.++
T Consensus 74 ~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 107 (109)
T 1bu3_A 74 GARALTDAETKAFLKAGDSDGDGAIGVDEWAALV 107 (109)
T ss_dssp TCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence 1455677889999999999999999999999876
No 230
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=99.11 E-value=1.3e-10 Score=117.71 Aligned_cols=106 Identities=23% Similarity=0.393 Sum_probs=89.0
Q ss_pred hCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCC
Q psy5584 1206 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1285 (2014)
Q Consensus 1206 L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~ 1285 (2014)
|+..++.++++++|..+| ++|.|+++||..++.. .....++++.+|+.+|.|++|.|+.+||..++..+.
T Consensus 3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~------ 72 (109)
T 3fs7_A 3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFS------ 72 (109)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC------
T ss_pred ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhc--CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh------
Confidence 455677888999999999 8999999999999864 456788999999999999999999999998764310
Q ss_pred CCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHh
Q psy5584 1286 SLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL 1365 (2014)
Q Consensus 1286 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~L 1365 (2014)
. .
T Consensus 73 -------------------------------------------------------------~-----------------~ 74 (109)
T 3fs7_A 73 -------------------------------------------------------------S-----------------S 74 (109)
T ss_dssp -------------------------------------------------------------T-----------------T
T ss_pred -------------------------------------------------------------c-----------------c
Confidence 0 1
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHH
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~ 1399 (2014)
|..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 75 ~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~ 108 (109)
T 3fs7_A 75 ARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108 (109)
T ss_dssp SCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred cccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 4566778899999999999999999999998763
No 231
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=99.10 E-value=3.3e-10 Score=114.74 Aligned_cols=105 Identities=23% Similarity=0.424 Sum_probs=85.7
Q ss_pred CCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCC
Q psy5584 1207 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS 1286 (2014)
Q Consensus 1207 ~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~ 1286 (2014)
+...+.++++++|..+|. +|.|+++||..++.. ...+.++++.+|+.+|.|++|.|+.+||..++..+..
T Consensus 3 ~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~------ 72 (109)
T 5pal_A 3 TKVLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA------ 72 (109)
T ss_dssp GGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCT------
T ss_pred CCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhh--ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH------
Confidence 334567778889999987 899999999998754 3557889999999999999999999999988765210
Q ss_pred CCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhC
Q psy5584 1287 LTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG 1366 (2014)
Q Consensus 1287 ~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg 1366 (2014)
.|
T Consensus 73 ------------------------------------------------------------------------------~g 74 (109)
T 5pal_A 73 ------------------------------------------------------------------------------HG 74 (109)
T ss_dssp ------------------------------------------------------------------------------TC
T ss_pred ------------------------------------------------------------------------------cC
Confidence 14
Q ss_pred CCChHHHHHHHHHHHccCCCCceeHHHHHHHHH
Q psy5584 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399 (2014)
Q Consensus 1367 ~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~ 1399 (2014)
..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 75 ~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 5pal_A 75 RDLNDTETKALLAAGDSDHDGKIGADEFAKMVA 107 (109)
T ss_dssp CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 556777889999999999999999999998875
No 232
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=99.09 E-value=9.1e-12 Score=126.15 Aligned_cols=106 Identities=20% Similarity=0.296 Sum_probs=88.2
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1444 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~ 1444 (2014)
|+..++..+++.++..+| ++|.|+|+||+..+.. .....++++.+|+.+|+|++|.|+.+||+.++..++. .+.
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~-~g~- 75 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFES-GAR- 75 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHSS-SCC-
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhh-ccC-
Confidence 566788899999999998 8999999999998742 2345677999999999999999999999999998721 011
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.+++++++. +|+.+|.|++|.|+|+||+.++.
T Consensus 76 ~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~~ 107 (108)
T 2kyc_A 76 VLTASETKT----FLAAADHDGDGKIGAEEFQEMVQ 107 (108)
T ss_dssp CCCTTTTHH----HHTTTCCSSSSCCCSSHHHHHHH
T ss_pred CCCHHHHHH----HHHHhCCCCCCcCCHHHHHHHHh
Confidence 677776554 88889999999999999999885
No 233
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=99.09 E-value=2.3e-10 Score=115.78 Aligned_cols=106 Identities=22% Similarity=0.313 Sum_probs=88.4
Q ss_pred HhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcC
Q psy5584 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284 (2014)
Q Consensus 1205 ~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~ 1284 (2014)
.||. ++..+++.+|..+| ++|.|+++||..++... ....++++.+|+.+|.|++|.|+.+||..++..+.
T Consensus 2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----- 71 (108)
T 2pvb_A 2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA--SKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFS----- 71 (108)
T ss_dssp CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTC-----
T ss_pred CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC--hhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHh-----
Confidence 4677 88899999999999 88999999999988542 45688999999999999999999999998764310
Q ss_pred CCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHH
Q psy5584 1285 TSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA 1364 (2014)
Q Consensus 1285 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~ 1364 (2014)
.
T Consensus 72 -------------------------------------------------------------------------------~ 72 (108)
T 2pvb_A 72 -------------------------------------------------------------------------------P 72 (108)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~ 1399 (2014)
.|..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 73 ~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (108)
T 2pvb_A 73 SARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107 (108)
T ss_dssp TSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 14556778899999999999999999999998763
No 234
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=99.09 E-value=2e-10 Score=132.58 Aligned_cols=117 Identities=22% Similarity=0.328 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhh---cCC-CC
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA---RTT-SL 1446 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~---~~~-~l 1446 (2014)
+..++.+|+.+|.|++|.|+|.||+.++..+.++..+++++.+|++|| |+||+|+++|+..+++++..+. +.. .+
T Consensus 131 ~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~ 209 (261)
T 1eg3_A 131 DMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASF 209 (261)
T ss_dssp HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGG
T ss_pred HHHHHHHHHHccCCCCceEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccC
Confidence 456888999999999999999999999999999999999999999999 9999999999999998754321 110 22
Q ss_pred CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccchhcc
Q psy5584 1447 TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIG 1490 (2014)
Q Consensus 1447 s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l~~~~ 1490 (2014)
.++.+++.++.+|+.+| +||.|+.+||++.++..|..+..+.
T Consensus 210 ~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~dp~il~wL~ 251 (261)
T 1eg3_A 210 GGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRLEPQSMVWLP 251 (261)
T ss_dssp TCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHTCCTTTTHHH
T ss_pred CCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHhCcHHHHHHH
Confidence 22335567888999996 8899999999999999988776654
No 235
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Probab=99.08 E-value=2.4e-10 Score=115.73 Aligned_cols=106 Identities=23% Similarity=0.379 Sum_probs=86.6
Q ss_pred hCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCC
Q psy5584 1206 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1285 (2014)
Q Consensus 1206 L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~ 1285 (2014)
||..++.++++.+|..+| ++|.|+++||..++... ....++++.+|+.+|.|++|.|+.+||..++..+..
T Consensus 2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~----- 72 (109)
T 1rwy_A 2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSS----- 72 (109)
T ss_dssp HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCT-----
T ss_pred CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC--cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhc-----
Confidence 344567778889999998 89999999999987532 456789999999999999999999999998865210
Q ss_pred CCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHh
Q psy5584 1286 SLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL 1365 (2014)
Q Consensus 1286 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~L 1365 (2014)
.
T Consensus 73 -------------------------------------------------------------------------------~ 73 (109)
T 1rwy_A 73 -------------------------------------------------------------------------------D 73 (109)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHHH
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~ 1399 (2014)
|..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 74 g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~ 107 (109)
T 1rwy_A 74 ARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVA 107 (109)
T ss_dssp CCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 3456677889999999999999999999998764
No 236
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=99.06 E-value=2.4e-10 Score=115.97 Aligned_cols=107 Identities=26% Similarity=0.413 Sum_probs=89.2
Q ss_pred HhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcC
Q psy5584 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284 (2014)
Q Consensus 1205 ~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~ 1284 (2014)
+||..++..+++.+|..+| ++|.|+++||..++.. .....++++.+|+.+|.|++|.|+.+||..++..+.
T Consensus 2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~----- 72 (110)
T 1pva_A 2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFA----- 72 (110)
T ss_dssp CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC--TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTC-----
T ss_pred cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc--CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHh-----
Confidence 4666778889999999999 8999999999998842 345788999999999999999999999998774310
Q ss_pred CCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHH
Q psy5584 1285 TSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA 1364 (2014)
Q Consensus 1285 ~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~ 1364 (2014)
.
T Consensus 73 -------------------------------------------------------------------------------~ 73 (110)
T 1pva_A 73 -------------------------------------------------------------------------------A 73 (110)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------h
Confidence 0
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHH
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~ 1399 (2014)
.|..++..+++.++..+|.|++|.|+|+||+.++.
T Consensus 74 ~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~ 108 (110)
T 1pva_A 74 DGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVH 108 (110)
T ss_dssp TCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 14456778899999999999999999999998764
No 237
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Probab=99.03 E-value=4e-10 Score=113.93 Aligned_cols=105 Identities=23% Similarity=0.328 Sum_probs=86.7
Q ss_pred hCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCC
Q psy5584 1206 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT 1285 (2014)
Q Consensus 1206 L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~ 1285 (2014)
|+..++.++++.+|..+| ++|.|+++||..++.. .....++++.+|+.+|.|++|.|+.+||..++..+..
T Consensus 2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~----- 72 (108)
T 1rro_A 2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQS----- 72 (108)
T ss_dssp GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSG--GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCT-----
T ss_pred ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhc--CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhh-----
Confidence 445567778888999998 8999999999998843 2456889999999999999999999999987643100
Q ss_pred CCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHh
Q psy5584 1286 SLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL 1365 (2014)
Q Consensus 1286 ~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~L 1365 (2014)
.
T Consensus 73 -------------------------------------------------------------------------------~ 73 (108)
T 1rro_A 73 -------------------------------------------------------------------------------D 73 (108)
T ss_dssp -------------------------------------------------------------------------------T
T ss_pred -------------------------------------------------------------------------------c
Confidence 1
Q ss_pred CCCChHHHHHHHHHHHccCCCCceeHHHHHHHH
Q psy5584 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398 (2014)
Q Consensus 1366 g~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l 1398 (2014)
|..++..+++.+|..+|.|++|.|+|+||+.++
T Consensus 74 g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~ 106 (108)
T 1rro_A 74 ARELTESETKSLMDAADNDGDGKIGADEFQEMV 106 (108)
T ss_dssp SCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 345677789999999999999999999999876
No 238
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.00 E-value=1.8e-10 Score=151.00 Aligned_cols=133 Identities=14% Similarity=0.220 Sum_probs=61.1
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1292 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~ 1292 (2014)
..++++|..+|+|+||.|+++||..++..++...++++++.+|+.+|.|++|.|+++||..++..+.
T Consensus 11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~------------- 77 (624)
T 1djx_A 11 HWIHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLT------------- 77 (624)
T ss_dssp ---------------------------------------------------------CTTHHHHHHT-------------
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhc-------------
Confidence 4688999999999999999999999999998888999999999999999999999999998875421
Q ss_pred HHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHH
Q psy5584 1293 TELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAV 1372 (2014)
Q Consensus 1293 ~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~ 1372 (2014)
..+
T Consensus 78 -----------------------------------------------------------------------------~~~ 80 (624)
T 1djx_A 78 -----------------------------------------------------------------------------QRA 80 (624)
T ss_dssp -----------------------------------------------------------------------------CCH
T ss_pred -----------------------------------------------------------------------------cHH
Confidence 013
Q ss_pred HHHHHHHHHccCCCCceeHHHHHHHHHHHh-cC-CcHHHHHHHHhhhcCC----CCCeeeHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RG-HTEDKLRIIFDMCDND----RNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1373 ~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~-~~-~~~e~l~~~F~~~D~D----gdG~Is~eEf~~~L~~ 1436 (2014)
++..+|+.+|.+ +|.|+++||..++.... .. .+++++..+++.+|.| ++|.|+.+||..+|.+
T Consensus 81 el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s 149 (624)
T 1djx_A 81 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS 149 (624)
T ss_dssp HHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHS
T ss_pred HHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcC
Confidence 578889999985 89999999999998653 22 5788899999999998 7999999999998874
No 239
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}
Probab=98.98 E-value=2.2e-10 Score=121.17 Aligned_cols=62 Identities=10% Similarity=0.043 Sum_probs=26.9
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHHHhc-CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1215 l~~lF~~~D~dgdG~Is~~EF~~~l~~l~-~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
++++|..+|.|++|.|+++||..++.... .....++++.+|+.+|.|++|.|+.+||..++.
T Consensus 5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~ 67 (135)
T 3h4s_E 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSG 67 (135)
T ss_dssp --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGG
T ss_pred HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHH
Confidence 46778888888888888888888776522 222356677888888888888888888877653
No 240
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.95 E-value=5.6e-10 Score=149.66 Aligned_cols=95 Identities=8% Similarity=0.104 Sum_probs=61.2
Q ss_pred ccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH-HHhh-cCC---CCCHHHHHHHHH
Q psy5584 1382 DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL-VEMA-RTT---SLTDSQVTELID 1456 (2014)
Q Consensus 1382 D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l-~~~~-~~~---~ls~~e~~~li~ 1456 (2014)
|.+++|.|+|+||+.++..+. ..++++.+|+.||+|++|+|+.+||+++|..+ ++.. +.. .++++++++
T Consensus 196 D~d~~g~idf~EF~~~~~~l~---~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~--- 269 (799)
T 2zkm_X 196 DAINPEDFPEPVYKSFLMSLC---PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQG--- 269 (799)
T ss_dssp CEECGGGCCHHHHHHHHHHHS---CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHH---
T ss_pred ccCCCCcCCHHHHHHHHHHcc---CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHH---
Confidence 358899999999999998764 35789999999999999999999999999975 3310 000 055565544
Q ss_pred HHHHHcCCC----CCCcccHHHHHHHHHhCc
Q psy5584 1457 GMFQDAGLD----SKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1457 ~if~~~D~d----~dG~Is~eEF~~~l~~~~ 1483 (2014)
|++++|.| ++|.|+|+||..+|....
T Consensus 270 -iI~~~d~d~~~~~dg~is~eeF~~~L~S~~ 299 (799)
T 2zkm_X 270 -LIDKYEPSGINAQRGQLSPEGMVWFLCGPE 299 (799)
T ss_dssp -HHHHHCCC--------CCHHHHHHHHHSTT
T ss_pred -HHHHhhcccccccCCccchhhhhhcccCcc
Confidence 77789998 899999999999998654
No 241
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.91 E-value=4.5e-10 Score=121.12 Aligned_cols=114 Identities=14% Similarity=0.140 Sum_probs=84.1
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~ 1289 (2014)
++..+++.++..+|.+++ ...+.++ ....++++.+|+.+|.|++|.|+.+||..++..
T Consensus 21 ~~~~~~~~i~~~~d~~~~-~~~~~~l---------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~------------ 78 (150)
T 2jjz_A 21 RQERRLAEINREFLCDQK-YSDEENL---------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK------------ 78 (150)
T ss_dssp HHHHHHHHHHHHHHTCGG-GSSCTTH---------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHH------------
T ss_pred CcHHHHHHHHHHhccCCC-chhhHhH---------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHH------------
Confidence 456789999999998875 2222222 123467899999999999999999999998754
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCC
Q psy5584 1290 SQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369 (2014)
Q Consensus 1290 ~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~ 1369 (2014)
+|..+
T Consensus 79 ---------------------------------------------------------------------------~g~~~ 83 (150)
T 2jjz_A 79 ---------------------------------------------------------------------------LGVPK 83 (150)
T ss_dssp ---------------------------------------------------------------------------TTCCC
T ss_pred ---------------------------------------------------------------------------cCCCC
Confidence 34556
Q ss_pred hHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCee
Q psy5584 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1425 (2014)
Q Consensus 1370 s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~I 1425 (2014)
+..+++.++..+|.|++|.|+|+||+.++... .+.+..+|+.+|.|++|.-
T Consensus 84 ~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~~~i~~aF~~~D~d~~G~~ 134 (150)
T 2jjz_A 84 THLEMKKMISEVTGGVSDTISYRDFVNMMLGK-----RSAVLKLVMMFEGKANESS 134 (150)
T ss_dssp CHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS-----SCCHHHHHHC---------
T ss_pred CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh-----HHHHHHHHHHHcCCCCCCC
Confidence 77789999999999999999999999988643 3559999999999999984
No 242
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Probab=98.86 E-value=3.6e-10 Score=114.29 Aligned_cols=68 Identities=21% Similarity=0.303 Sum_probs=56.5
Q ss_pred hCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1206 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1206 L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
|+..++..+++++|..+| ++|.|+++||..++.. .....++++.+|+.+|.|++|.|+.+||..++..
T Consensus 2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~--~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~ 69 (108)
T 2kyc_A 2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQR 69 (108)
T ss_dssp TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTC--TTCCSSSHHHHCSSSCSCCSSCCCGGGTTTSHHH
T ss_pred ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhh--CcccHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 455667778888999998 8999999999998842 2345678999999999999999999999988765
No 243
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C
Probab=98.81 E-value=1.9e-09 Score=115.17 Aligned_cols=64 Identities=14% Similarity=0.076 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHHHhcC-----CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1214 ~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~-----~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
....+|..+|.|+||.|+++||..++..+.. ..++++++.+|+.+|.|+||+|+++||..++..
T Consensus 28 ~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~ 96 (143)
T 3a4u_B 28 ASFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITH 96 (143)
T ss_dssp -----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-
T ss_pred CCHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHH
Confidence 3457899999999999999999998876532 244678999999999999999999999988754
No 244
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=98.75 E-value=5.6e-09 Score=104.06 Aligned_cols=63 Identities=25% Similarity=0.470 Sum_probs=57.4
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l 1479 (2014)
++++.+|+.+|+|++|+|+.+||+.+|+.++. .++++++++ +|+.+|.|+||.|+|+||+.+|
T Consensus 36 ~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~-----~~~~~ei~~----l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGY-----MPNEVELEV----IIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTC-----CCCTTTHHH----HHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCC-----CCCHHHHHH----HHHHHCCCCCCeEeHHHHHHHh
Confidence 56899999999999999999999999998876 788888665 7888999999999999999986
No 245
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=98.74 E-value=2.3e-08 Score=115.40 Aligned_cols=110 Identities=19% Similarity=0.320 Sum_probs=86.0
Q ss_pred hHHHHHHHHhhccCCCCcccHHHHHhhhhhccCCCHHHHHHHHHhhccCCCCccccHHHHHHHHHHHHHhhcC-CCCC--
Q psy5584 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART-SFPS-- 145 (2014)
Q Consensus 69 ~s~~~~~f~~fD~d~~g~I~f~Efi~~~~~l~~~~~~d~l~~~f~~~D~d~~G~Is~~El~~~L~dL~niqrg-glp~-- 145 (2014)
..++..+|+.||+|++|.|+|.||+.+++.+++|..+|||+++|++|| |.+|+|+++||..+|.+++.|.+. |-.+
T Consensus 131 ~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~l~rG~leeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~ 209 (261)
T 1eg3_A 131 DMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASF 209 (261)
T ss_dssp HHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTSSSCHHHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGG
T ss_pred HHHHHHHHHHccCCCCceEeHHHHHHHHHHHcCCCHHHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccC
Confidence 457888999999999999999999999999999999999999999999 999999999999999998777654 3211
Q ss_pred C-CCchhHHHHHHHhhhhcCCCCcchhhhhhcccccc
Q psy5584 146 G-GAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLESH 181 (2014)
Q Consensus 146 ~-~~a~~i~~~~l~~~~~~~~~~~~idl~~gg~~E~~ 181 (2014)
+ ..+....+..++++. .+..=.+|-|+.++..+|
T Consensus 210 ~~~~~e~~v~~~F~~~d--~dg~It~~EFl~~~~~dp 244 (261)
T 1eg3_A 210 GGSNIEPSVRSCFQFAN--NKPEIEAALFLDWMRLEP 244 (261)
T ss_dssp TCSCCHHHHHHHHHHTT--TCSCBCHHHHHHHHHTCC
T ss_pred CCCCHHHHHHHHHHhCC--CCCcCCHHHHHHHHHhCc
Confidence 2 444556677777764 122223455655555444
No 246
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=98.72 E-value=1.3e-08 Score=141.05 Aligned_cols=130 Identities=17% Similarity=0.223 Sum_probs=107.1
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
...++.+|..+|+|+||.|+.+||..++..++...+++++..+|..+|.|+||.|+++||..++.....
T Consensus 724 ~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~----------- 792 (863)
T 1sjj_A 724 MNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETA----------- 792 (863)
T ss_dssp HHHHHHHHTTTCSSSSSEEESTTHHHHHHHHTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHST-----------
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhc-----------
Confidence 356889999999999999999999999999998899999999999999999999999999988754210
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChH
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA 1371 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~ 1371 (2014)
.....
T Consensus 793 ---------------------------------------------------------------------------~~~~~ 797 (863)
T 1sjj_A 793 ---------------------------------------------------------------------------DTDTA 797 (863)
T ss_dssp ---------------------------------------------------------------------------TCSSS
T ss_pred ---------------------------------------------------------------------------CCCCH
Confidence 00122
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCC-----CCCeeeHHHHHHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-----RNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~D-----gdG~Is~eEf~~~L~ 1435 (2014)
+.+...|..+ .|++|.|+.+||..++. ++.+..+|+.+|.+ +||.|+++||..++.
T Consensus 798 ~~l~~aF~~~-~d~~G~Is~~El~~~l~-------~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~ 858 (863)
T 1sjj_A 798 DQVMASFKIL-AGDKNYITVDELRRELP-------PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALY 858 (863)
T ss_dssp HHHHHHHHGG-GTSSSEEEHHHHHHHSC-------HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHS
T ss_pred HHHHHHHHHH-hCCCCcCcHHHHHHHCC-------HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHh
Confidence 3467778888 78888899888888762 56788888888876 688899888888764
No 247
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.70 E-value=1.9e-09 Score=104.27 Aligned_cols=85 Identities=21% Similarity=0.351 Sum_probs=67.8
Q ss_pred CCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC
Q psy5584 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG 1463 (2014)
Q Consensus 1384 DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D 1463 (2014)
|++|.|+|+|+ .+.........++++.+|+.+|+|++|.|+.+||+.+++.++. .+++++++. +|+.+|
T Consensus 1 ~~~G~i~~~e~--~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----~~~~~~~~~----l~~~~d 69 (87)
T 1s6j_A 1 HSSGHIDDDDK--HMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS-----ELMESEIKD----LMDAAD 69 (87)
T ss_dssp CCSSSSSSHHH--HSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTS-----SCCHHHHHH----HHHHHC
T ss_pred CCCCccCccHH--HHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhC
Confidence 57899999993 2221122233456899999999999999999999999987764 788887655 788899
Q ss_pred CCCCCcccHHHHHHHH
Q psy5584 1464 LDSKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1464 ~d~dG~Is~eEF~~~l 1479 (2014)
.|++|.|+|+||+.++
T Consensus 70 ~~~~g~i~~~eF~~~~ 85 (87)
T 1s6j_A 70 IDKSGTIDYGEFIAAT 85 (87)
T ss_dssp TTCSSEECHHHHTTCC
T ss_pred CCCCCcCcHHHHHHHH
Confidence 9999999999998754
No 248
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.64 E-value=2.1e-09 Score=111.55 Aligned_cols=103 Identities=17% Similarity=0.283 Sum_probs=51.6
Q ss_pred HhCCCChHHHHHHHHHHHccCCCCceeHHHHHH-----HHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHH
Q psy5584 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD-----TVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437 (2014)
Q Consensus 1364 ~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~-----~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l 1437 (2014)
.+|..++..+++.++..+ +|.|+|+||+. ++.... .....++++.+|+.|| |+|+.+|++.+++.+
T Consensus 4 ~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~l 75 (123)
T 2kld_A 4 AIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKGK 75 (123)
T ss_dssp ---------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTTC
T ss_pred hcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHHh
Confidence 468888889999998876 78999999998 554432 2233456888999998 999999999999864
Q ss_pred HHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCccc
Q psy5584 1438 VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGD 1485 (2014)
Q Consensus 1438 ~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~ 1485 (2014)
+ . ++++++ .+++.+|.|+||.|+|+||+.+|.+....
T Consensus 76 G------~-t~~ei~----~~~~~~D~d~dG~I~~~EF~~~~~~~~~~ 112 (123)
T 2kld_A 76 G------H-TDAEIE----AIFTKYDQDGDQELTEHEHQQMRDDLEKE 112 (123)
T ss_dssp C------S-SHHHHH----HHHHHHSSSSCCEECSHHHHHCSCTTTCC
T ss_pred C------C-CHHHHH----HHHHHHcCCCCCcCcHHHHHHHHHHHHHh
Confidence 3 2 666654 48888999999999999999998765543
No 249
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.63 E-value=9.5e-08 Score=127.87 Aligned_cols=93 Identities=11% Similarity=0.110 Sum_probs=74.9
Q ss_pred CCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCC-----CCCHHHHHHHHHHH
Q psy5584 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT-----SLTDSQVTELIDGM 1458 (2014)
Q Consensus 1384 DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~-----~ls~~e~~~li~~i 1458 (2014)
+++|.|+|+||+.++..+.. .++++.+|+.||.+++|.||.+||..+|+....+.... .++++++.+ |
T Consensus 202 ~~~g~i~feEF~~f~~~l~~---R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~----i 274 (885)
T 3ohm_B 202 IRPDEFSLEIFERFLNKLCL---RPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARL----L 274 (885)
T ss_dssp ECGGGCCHHHHHHHHHHHSC---CHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHH----H
T ss_pred CCCCcCCHHHHHHHHHhcCC---HHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHH----H
Confidence 37899999999999987743 46799999999999999999999999999764211000 256676555 6
Q ss_pred HHHcCCC----CCCcccHHHHHHHHHhCc
Q psy5584 1459 FQDAGLD----SKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1459 f~~~D~d----~dG~Is~eEF~~~l~~~~ 1483 (2014)
++.++.+ ++|.|++++|..+|....
T Consensus 275 I~k~e~~~~~~~~g~LsldgF~~yL~S~~ 303 (885)
T 3ohm_B 275 IEKYEPNQQFLERDQMSMEGFSRYLGGEE 303 (885)
T ss_dssp HHHHCCCHHHHHTTEECHHHHHHHHTSTT
T ss_pred HHHhcCChhhhccCccchhhhhhhccCcc
Confidence 7779998 789999999999998644
No 250
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=98.61 E-value=3.8e-08 Score=98.07 Aligned_cols=63 Identities=30% Similarity=0.412 Sum_probs=60.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l 1275 (2014)
.+++++|..+|+|++|.|+.+||..++..++...++++++.+|+.+|.|+||.|+++||..+|
T Consensus 36 ~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m 98 (100)
T 2lv7_A 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98 (100)
T ss_dssp HHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence 458999999999999999999999999999999999999999999999999999999999875
No 251
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.56 E-value=5.4e-08 Score=130.58 Aligned_cols=130 Identities=11% Similarity=0.197 Sum_probs=95.1
Q ss_pred HHHHHHHHH--hhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccC-------CCCCcccHHHHHHHHHHHHHhh
Q psy5584 1212 AVFVRMMFN--IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN-------DRNGVIDKGELAEMLRSLVEMA 1282 (2014)
Q Consensus 1212 ~~~l~~lF~--~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~-------D~dG~Is~eEF~~~l~~~~~~~ 1282 (2014)
...++++|. .+|+|+||.|+.+|+..+|.. .+++++.+++.+|. |++|.|+++||..++..+.
T Consensus 145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~--- 216 (799)
T 2zkm_X 145 STFLDKILVKLKMQLNSEGKIPVKNFFQMFPA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC--- 216 (799)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHHSCS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHhHHhccCCCCCCeECHHHHHHHHhh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHcc---
Confidence 456889999 899999999999999998853 47899999999985 8899999999999875421
Q ss_pred cCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHH
Q psy5584 1283 RTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA 1362 (2014)
Q Consensus 1283 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~ 1362 (2014)
T Consensus 217 -------------------------------------------------------------------------------- 216 (799)
T 2zkm_X 217 -------------------------------------------------------------------------------- 216 (799)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhc-C---------CcHHHHHHHHhhhcCC----CCCeeeHH
Q psy5584 1363 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR-G---------HTEDKLRIIFDMCDND----RNGVIDKG 1428 (2014)
Q Consensus 1363 ~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~-~---------~~~e~l~~~F~~~D~D----gdG~Is~e 1428 (2014)
..+++..+|..+|.|++|.|+.+||..++..... . .++++++.+++.+|.| ++|.|+.+
T Consensus 217 -------~r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~e 289 (799)
T 2zkm_X 217 -------PRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPE 289 (799)
T ss_dssp -------CCHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHH
T ss_pred -------CHHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchh
Confidence 1245778888899999999999999999987632 2 4567799999999998 89999999
Q ss_pred HHHHHHHH
Q psy5584 1429 ELAEMLRS 1436 (2014)
Q Consensus 1429 Ef~~~L~~ 1436 (2014)
||..+|.+
T Consensus 290 eF~~~L~S 297 (799)
T 2zkm_X 290 GMVWFLCG 297 (799)
T ss_dssp HHHHHHHS
T ss_pred hhhhcccC
Confidence 99999874
No 252
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.55 E-value=1.5e-07 Score=92.56 Aligned_cols=70 Identities=34% Similarity=0.580 Sum_probs=61.5
Q ss_pred cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1403 RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1403 ~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.....++++.+|+.+|+|++|.|+.+||+.+++.++. .++++++++ +|+.+|.|+||.|+|+||+.++..
T Consensus 24 ~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~-----~~~~~e~~~----l~~~~D~d~dG~I~~~EF~~~~~~ 93 (94)
T 2kz2_A 24 DTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDE----MIREADIDGDGQVNYEEFVQMMTA 93 (94)
T ss_dssp CCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTC-----CCCHHHHHH----HHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHhc
Confidence 4466788999999999999999999999999998765 788887655 788899999999999999998864
No 253
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.54 E-value=4.4e-08 Score=97.35 Aligned_cols=70 Identities=10% Similarity=0.141 Sum_probs=57.1
Q ss_pred HHHHHHHhhhc-CCCC-CeeeHHHHHHHHHH-HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRN-GVIDKGELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~Dgd-G~Is~eEf~~~L~~-l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.|| +||+ |+|+.+||+.+++. ++...+. .++++++++ ||+++|.|+||.|+|+||+.+|...
T Consensus 10 ~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~-~~~~~ev~~----~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 10 AAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPT-EFRECDYNK----FMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCC-TTCHHHHHH----HHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCC-CCCHHHHHH----HHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 56899999998 8998 99999999999985 3211112 667777655 8888999999999999999998763
No 254
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.53 E-value=1.3e-07 Score=93.76 Aligned_cols=70 Identities=14% Similarity=0.324 Sum_probs=57.5
Q ss_pred HHHHHHHhhhc-CCCCC-eeeHHHHHHHHHH-HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRNG-VIDKGELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~-l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.|| +||+| +|+.+||+.+++. ++...+. .++++++++ +++++|.|+||.|+|+||+.+|...
T Consensus 11 ~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~-~~~~~ev~~----~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 11 AVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGE-KVDEEGLKK----LMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCS-SCCHHHHHH----HHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccC-CCCHHHHHH----HHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 56899999998 89995 9999999999985 4432222 567777555 8888999999999999999998764
No 255
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.53 E-value=8.1e-08 Score=87.50 Aligned_cols=64 Identities=16% Similarity=0.394 Sum_probs=56.6
Q ss_pred HHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1409 ~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
+++.+|+.+|+|++|.|+.+||+.+++.++. .++++++.. +|+.+|.|++|.|+|+||+.++.+
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----~~~~~~~~~----~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSP-----YFTQEDIVK----FFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCT-----TSCHHHHHH----HHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHHCCCCCCcCcHHHHHHHHHH
Confidence 4788999999999999999999999997654 778877555 888899999999999999999875
No 256
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.51 E-value=1.8e-07 Score=88.34 Aligned_cols=71 Identities=25% Similarity=0.447 Sum_probs=60.6
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccc
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDF 1486 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l 1486 (2014)
+++++.+|+.+|.|++|.|+.+||+.+++.++ .+++++++. +|+.+|.|++|.|+|+||+.++...+..+
T Consensus 2 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g------~~~~~~~~~----~~~~~D~~~dg~i~~~ef~~~~~~~~~~~ 71 (78)
T 1k9u_A 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLG------STSADEVQR----MMAEIDTDGDGFIDFNEFISFCNANPGLM 71 (78)
T ss_dssp -CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH------TCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHHHHCHHHH
T ss_pred hHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC------CCCHHHHHH----HHHHhCCCCCCeEcHHHHHHHHHHCchhH
Confidence 35689999999999999999999999999875 456776544 78889999999999999999999887654
Q ss_pred h
Q psy5584 1487 V 1487 (2014)
Q Consensus 1487 ~ 1487 (2014)
+
T Consensus 72 ~ 72 (78)
T 1k9u_A 72 K 72 (78)
T ss_dssp H
T ss_pred H
Confidence 3
No 257
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.51 E-value=6.3e-08 Score=99.30 Aligned_cols=58 Identities=17% Similarity=0.334 Sum_probs=40.8
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC----------------CcHHHHHHHHhhhcCCCC
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG----------------HTEDKLRIIFDMCDNDRN 1422 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~----------------~~~e~l~~~F~~~D~Dgd 1422 (2014)
+|...+..+++++++.+|.|+||.|+|+||+.++..+... ..+..++.+|+.+|.|||
T Consensus 48 l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~~he~f~~~~k~~~~~~~~d~~~~e~~~~~d~~gd 121 (121)
T 4drw_A 48 LENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIACNDYFVVHMKQENLYFQGDSTVHEILSKLSLEGD 121 (121)
T ss_dssp HTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHHHHHHHTTSCC---------CCHHHHHHHCCC---
T ss_pred cccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhcccCC
Confidence 4556677889999999999999999999999988765321 122336666666666654
No 258
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A
Probab=98.50 E-value=4.9e-08 Score=105.09 Aligned_cols=95 Identities=17% Similarity=0.152 Sum_probs=77.6
Q ss_pred ChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1369 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1448 (2014)
Q Consensus 1369 ~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~ 1448 (2014)
++..+++.++..+|.+++ +.+|...- ...++++.+|+.+|+|++|.|+.+||+.+++.++. .+++
T Consensus 21 ~~~~~~~~i~~~~d~~~~----~~~~~~l~------~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-----~~~~ 85 (150)
T 2jjz_A 21 RQERRLAEINREFLCDQK----YSDEENLP------EKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGV-----PKTH 85 (150)
T ss_dssp HHHHHHHHHHHHHHTCGG----GSSCTTHH------HHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTC-----CCCH
T ss_pred CcHHHHHHHHHHhccCCC----chhhHhHH------HHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCC-----CCCH
Confidence 467789999999998765 33333321 22467999999999999999999999999997764 7888
Q ss_pred HHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1449 SQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1449 ~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+++++ +|+.+|.|++|.|+|+||+.++...
T Consensus 86 ~e~~~----l~~~~D~d~dg~I~~~eF~~~~~~~ 115 (150)
T 2jjz_A 86 LEMKK----MISEVTGGVSDTISYRDFVNMMLGK 115 (150)
T ss_dssp HHHHH----HHHHHHTTSCSSBCHHHHHHHHHSS
T ss_pred HHHHH----HHHHHCCCCCCcEeHHHHHHHHHHh
Confidence 87655 7888999999999999999999875
No 259
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=98.49 E-value=9.8e-08 Score=102.35 Aligned_cols=86 Identities=17% Similarity=0.271 Sum_probs=70.1
Q ss_pred HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFRE 1327 (2014)
Q Consensus 1248 eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~ 1327 (2014)
.++++.+|+.+|.|++|.|+.+||..++..
T Consensus 47 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-------------------------------------------------- 76 (147)
T 1wy9_A 47 LEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-------------------------------------------------- 76 (147)
T ss_dssp HHHHHHHHTTSCCCTTSSEEHHHHHHHHHH--------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHH--------------------------------------------------
Confidence 467899999999999999999999998754
Q ss_pred HHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcH
Q psy5584 1328 AYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTE 1407 (2014)
Q Consensus 1328 ~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~ 1407 (2014)
+|..++..+++.++..+|.|++|.|+|+||+.++... .
T Consensus 77 -------------------------------------~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~-----~ 114 (147)
T 1wy9_A 77 -------------------------------------LGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK-----R 114 (147)
T ss_dssp -------------------------------------TTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS-----G
T ss_pred -------------------------------------hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh-----H
Confidence 3456677889999999999999999999999987532 4
Q ss_pred HHHHHHHhhhcCCCCCee
Q psy5584 1408 DKLRIIFDMCDNDRNGVI 1425 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~I 1425 (2014)
+.+..+|+.+|.|++|..
T Consensus 115 ~~~~~aF~~~D~d~~g~~ 132 (147)
T 1wy9_A 115 SAILRMILMYEEKNKEHK 132 (147)
T ss_dssp GGGGGGGGGCCCC-----
T ss_pred HHHHHHHHHHccCCCCCC
Confidence 668999999999999984
No 260
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=98.49 E-value=4.2e-07 Score=89.42 Aligned_cols=73 Identities=23% Similarity=0.366 Sum_probs=66.6
Q ss_pred HHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1204 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1204 ~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
..+......+.++++|..+|+|++|.|+.+||..++..++...++++++.+|+.+|.|++|.|+++||..++.
T Consensus 20 ~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~ 92 (94)
T 2kz2_A 20 SLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 92 (94)
T ss_dssp HHHCCCSCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence 3445556778899999999999999999999999999999899999999999999999999999999998874
No 261
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.48 E-value=1.4e-07 Score=92.53 Aligned_cols=70 Identities=13% Similarity=0.275 Sum_probs=55.0
Q ss_pred HHHHHHHhhhc-CCCC-CeeeHHHHHHHHHH-HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRN-GVIDKGELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~Dgd-G~Is~eEf~~~L~~-l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.|| +||+ |+|+.+||+.+++. ++...+. .++++++++ +++++|.|+||.|+|+||+.+|...
T Consensus 10 ~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~-~~~~~ev~~----~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 10 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQK----LMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC----CCHHHHHH----HHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccC-CCCHHHHHH----HHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 56899999998 6885 89999999999985 4421111 456666555 8888999999999999999998763
No 262
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.47 E-value=1.6e-07 Score=93.90 Aligned_cols=70 Identities=13% Similarity=0.280 Sum_probs=56.5
Q ss_pred HHHHHHHhhhc-CCCC-CeeeHHHHHHHHHH-HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRN-GVIDKGELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~Dgd-G~Is~eEf~~~L~~-l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.|| +||+ |+|+.+||+.+|+. ++...+. .++++++++ ||+++|.|+||.|+|+||+.+|...
T Consensus 13 ~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~-~~~~~ev~~----~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 13 DVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGK-RTDEAAFQK----LMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCS-SCCHHHHHH----HHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccC-CCCHHHHHH----HHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 56899999997 7886 89999999999985 4431122 456777555 8888999999999999999998764
No 263
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=98.47 E-value=3.1e-07 Score=83.56 Aligned_cols=64 Identities=27% Similarity=0.494 Sum_probs=60.4
Q ss_pred HHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1214 ~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.++.+|..+|+|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++..
T Consensus 2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 65 (67)
T 1tiz_A 2 SAKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK 65 (67)
T ss_dssp THHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 3688999999999999999999999999999999999999999999999999999999998753
No 264
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.47 E-value=1.1e-07 Score=90.92 Aligned_cols=72 Identities=18% Similarity=0.275 Sum_probs=63.4
Q ss_pred CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH--HhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV--EMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1405 ~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~--~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
...++++.+|+.+|.|++|.|+.+||..++..++ . .+++++++.++..+|+.+|.|+||.|+|+||+..+..
T Consensus 4 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~ 77 (83)
T 1yx7_A 4 KVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYK-----ALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE 77 (83)
T ss_dssp CSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCT-----TTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccc-----CCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence 3456799999999999999999999999999876 4 7788888887888999999999999999999976653
No 265
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.46 E-value=1.9e-07 Score=93.72 Aligned_cols=85 Identities=18% Similarity=0.250 Sum_probs=69.8
Q ss_pred ceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCC
Q psy5584 1388 RISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467 (2014)
Q Consensus 1388 ~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~d 1467 (2014)
.++++|+...+..... ...++++.+|+.+|+|++|.|+.+||+.+++.++. .++++++++ +|+.+|.|++
T Consensus 5 ~~~~~~~~~~l~~~~~-~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-----~~~~~e~~~----l~~~~d~~~~ 74 (105)
T 1wlz_A 5 ATADRDILARLHKAVT-SHYHAITQEFENFDTMKTNTISREEFRAICNRRVQ-----ILTDEQFDR----LWNEMPVNAK 74 (105)
T ss_dssp TTCCHHHHHHHHHHHH-HTHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTC-----CCCHHHHHH----HHTTSCBCTT
T ss_pred chhHHHHHHHHHHHHH-chHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHcCCCCC
Confidence 4567777777665433 34567999999999999999999999999998765 788887655 7888999999
Q ss_pred CcccHHHHHHHHHhC
Q psy5584 1468 DFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1468 G~Is~eEF~~~l~~~ 1482 (2014)
|.|+|+||+.++...
T Consensus 75 g~i~~~eF~~~~~~~ 89 (105)
T 1wlz_A 75 GRLKYPDFLSRFSSE 89 (105)
T ss_dssp SCBCHHHHHHHHC--
T ss_pred CCCcHHHHHHHHhcc
Confidence 999999999998754
No 266
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=98.46 E-value=3.9e-08 Score=94.94 Aligned_cols=50 Identities=24% Similarity=0.339 Sum_probs=25.9
Q ss_pred CCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1225 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1225 dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
|++|.|+++| .++.........++++.+|+.+|.|++|.|+.+||..++.
T Consensus 1 ~~~G~i~~~e--~~~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~ 50 (87)
T 1s6j_A 1 HSSGHIDDDD--KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK 50 (87)
T ss_dssp CCSSSSSSHH--HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH
T ss_pred CCCCccCccH--HHHHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 4566666666 1111111112223456666666666666666666666553
No 267
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.46 E-value=1e-07 Score=88.04 Aligned_cols=68 Identities=24% Similarity=0.457 Sum_probs=58.6
Q ss_pred CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1405 ~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
...++++.+|+.+|.|++|.|+.+||+.+++.++. .+++++++. +|+.+|.|++|.|+|+||+.++..
T Consensus 3 ~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~-----~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~~~ 70 (71)
T 2b1u_A 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQ-----PLPQEELDA----MIREADVDQDGRVNYEEFARMLAQ 70 (71)
T ss_dssp TTHHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTC-----SSCHHHHHH----HHHHCCSSSSSEEETTHHHHHHTC
T ss_pred ccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHhh
Confidence 34578999999999999999999999999987654 678877555 888899999999999999998853
No 268
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.45 E-value=6.1e-07 Score=120.18 Aligned_cols=130 Identities=12% Similarity=0.271 Sum_probs=111.6
Q ss_pred HHHHHHHHHh--hcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCC-------CCCcccHHHHHHHHHHHHHhh
Q psy5584 1212 AVFVRMMFNI--VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND-------RNGVIDKGELAEMLRSLVEMA 1282 (2014)
Q Consensus 1212 ~~~l~~lF~~--~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D-------~dG~Is~eEF~~~l~~~~~~~ 1282 (2014)
...++++|.. +|+|+||.|+.+|+..++.. ..++++.+|+.+|.+ ++|.|+++||..+++.+.
T Consensus 149 ~~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~-----~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~--- 220 (885)
T 3ohm_B 149 NTFLRKAYTKLKLQVNQDGRIPVKNILKMFSA-----DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLC--- 220 (885)
T ss_dssp HHHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG-----GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHS---
T ss_pred HHHHHHHHHHhcCccCCCCccCHHHHHHHHhc-----CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcC---
Confidence 4678889988 89999999999999988764 467899999999988 889999999999876421
Q ss_pred cCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHH
Q psy5584 1283 RTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA 1362 (2014)
Q Consensus 1283 ~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~ 1362 (2014)
T Consensus 221 -------------------------------------------------------------------------------- 220 (885)
T 3ohm_B 221 -------------------------------------------------------------------------------- 220 (885)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcC----------CcHHHHHHHHhhhcCC----CCCeeeHH
Q psy5584 1363 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG----------HTEDKLRIIFDMCDND----RNGVIDKG 1428 (2014)
Q Consensus 1363 ~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~----------~~~e~l~~~F~~~D~D----gdG~Is~e 1428 (2014)
...+++.+|..+|.+++|.|+.+||..++...... .+.+++..+++.+|.+ ++|.|+.+
T Consensus 221 -------~R~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~Lsld 293 (885)
T 3ohm_B 221 -------LRPDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSME 293 (885)
T ss_dssp -------CCHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHH
T ss_pred -------CHHHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchh
Confidence 12468999999999999999999999999987643 4668899999999999 79999999
Q ss_pred HHHHHHHH
Q psy5584 1429 ELAEMLRS 1436 (2014)
Q Consensus 1429 Ef~~~L~~ 1436 (2014)
+|..+|.+
T Consensus 294 gF~~yL~S 301 (885)
T 3ohm_B 294 GFSRYLGG 301 (885)
T ss_dssp HHHHHHTS
T ss_pred hhhhhccC
Confidence 99999974
No 269
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.45 E-value=1.1e-07 Score=86.59 Aligned_cols=63 Identities=11% Similarity=0.224 Sum_probs=54.2
Q ss_pred HHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1410 l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
++.+|+.+|.|++|.|+.+||..+++.++. .+++++ ++.+|+.+|.|++|.|+|+||..++..
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~-----~~~~~~----~~~~~~~~D~~~~g~i~~~ef~~~~~~ 64 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA-----IKNEQL----LQLIFKSIDADGNGEIDQNEFAKFYGS 64 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHH-----HHHHHH----HHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccC-----CCcHHH----HHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence 357899999999999999999999998875 445555 455889999999999999999999865
No 270
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.44 E-value=2.3e-07 Score=87.17 Aligned_cols=66 Identities=21% Similarity=0.486 Sum_probs=57.6
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++.+|+.+|+|++|.|+.+||+.+++.++. .++++++.. +|+.+|.|++|.|+|+||+.++..
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-----~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGF-----DVKKPEILE----LMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTC-----CCHHHHHHH----HHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHHCCCCCCcCcHHHHHHHHHH
Confidence 356899999999999999999999999998764 677776554 888899999999999999998865
No 271
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.43 E-value=2e-07 Score=94.62 Aligned_cols=71 Identities=13% Similarity=0.277 Sum_probs=57.0
Q ss_pred HHHHHHHHhhhc-CCCCC-eeeHHHHHHHHHH-HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1407 EDKLRIIFDMCD-NDRNG-VIDKGELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1407 ~e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~-l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++.+|+.|| +|++| +|+.+||+.+|+. ++...+. .++++++++ +|+++|.|+||.|+|+||+.+|...
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~-~~t~~ev~~----li~~~D~dgdG~Idf~EF~~~m~~~ 94 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGK-RTDEAAFQK----LMSNLDSNRDNEVDFQEYCVFLSCI 94 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTT-CCCTTHHHH----HHHHHCSSSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCC-CCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 357999999999 89997 9999999999985 2211112 567776555 7888999999999999999998754
No 272
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.43 E-value=6.5e-07 Score=85.85 Aligned_cols=66 Identities=20% Similarity=0.328 Sum_probs=62.0
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
..++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++...
T Consensus 14 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSSCCCHHHHHHHHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 448899999999999999999999999999989999999999999999999999999999998763
No 273
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.43 E-value=3.4e-07 Score=88.17 Aligned_cols=71 Identities=25% Similarity=0.437 Sum_probs=60.3
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccc
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDF 1486 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l 1486 (2014)
.++++.+|+.+|+|++|.|+.+||+.+++.++ .+++++++ .+|+.+|.|+||.|+|+||+.++...+..+
T Consensus 10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g------~~~~~~~~----~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~ 79 (86)
T 2opo_A 10 IADRERIFKRFDTNGDGKISSSELGDALKTLG------SVTPDEVR----RMMAEIDTDGDGFISFDEFTDFARANRGLV 79 (86)
T ss_dssp HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT------TCCHHHHH----HHHHHHCTTCSSEECHHHHHHHHHHCTTTH
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC------CCCHHHHH----HHHHHhCCCCCCcCcHHHHHHHHHHCccHH
Confidence 46789999999999999999999999998653 45666654 488889999999999999999999887654
Q ss_pred h
Q psy5584 1487 V 1487 (2014)
Q Consensus 1487 ~ 1487 (2014)
+
T Consensus 80 ~ 80 (86)
T 2opo_A 80 K 80 (86)
T ss_dssp H
T ss_pred H
Confidence 3
No 274
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.43 E-value=8.7e-07 Score=86.44 Aligned_cols=81 Identities=32% Similarity=0.536 Sum_probs=65.8
Q ss_pred HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5584 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFRE 1327 (2014)
Q Consensus 1248 eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~ 1327 (2014)
.++++.+|+.+|.|++|.|+.+||..++..
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-------------------------------------------------- 37 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMIN-------------------------------------------------- 37 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHH--------------------------------------------------
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHH--------------------------------------------------
Confidence 467889999999999999999999988754
Q ss_pred HHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCC--
Q psy5584 1328 AYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-- 1405 (2014)
Q Consensus 1328 ~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~-- 1405 (2014)
+|..++..+++.+|..+|.|++|.|+|+||+.++.......
T Consensus 38 -------------------------------------~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~ 80 (92)
T 2kn2_A 38 -------------------------------------LGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGG 80 (92)
T ss_dssp -------------------------------------TTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCCC
T ss_pred -------------------------------------hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCCC
Confidence 34556778899999999999999999999999988765442
Q ss_pred -cHHHHHHHHh
Q psy5584 1406 -TEDKLRIIFD 1415 (2014)
Q Consensus 1406 -~~e~l~~~F~ 1415 (2014)
..++++.+|+
T Consensus 81 ~~~~~l~~aF~ 91 (92)
T 2kn2_A 81 NGWSRLRRKFS 91 (92)
T ss_dssp HHHHHHHHHHT
T ss_pred chHHHHHHHhc
Confidence 2356776664
No 275
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.43 E-value=3.6e-07 Score=90.07 Aligned_cols=66 Identities=18% Similarity=0.331 Sum_probs=56.8
Q ss_pred HHHHHHHhhhc-CCCCC-eeeHHHHHHHHHH-----HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1408 DKLRIIFDMCD-NDRNG-VIDKGELAEMLRS-----LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1408 e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~-----l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
++++.+|+.|| +|++| +|+.+||+.+++. ++. .++++++++ +++.+|.|+||.|+|+||+.+|.
T Consensus 12 ~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~-----~~~~~~v~~----~~~~~D~d~dG~I~f~EF~~~~~ 82 (95)
T 2wcb_A 12 EGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKN-----IKDKAVIDE----IFQGLDANQDEQVDFQEFISLVA 82 (95)
T ss_dssp HHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHH-----CCCHHHHHH----HHTTSSSSTTSEEEHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccc-----cccHHHHHH----HHHHHcCCCCCcCcHHHHHHHHH
Confidence 56899999999 89998 9999999999986 444 677776555 78889999999999999999987
Q ss_pred hC
Q psy5584 1481 DY 1482 (2014)
Q Consensus 1481 ~~ 1482 (2014)
..
T Consensus 83 ~~ 84 (95)
T 2wcb_A 83 IA 84 (95)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 276
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=98.42 E-value=6.2e-07 Score=86.27 Aligned_cols=64 Identities=28% Similarity=0.441 Sum_probs=60.8
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|.|++|.|+.+||..++..++ ..+++++..+|+.+|.|++|.|+++||..++..
T Consensus 11 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 74 (86)
T 2opo_A 11 ADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA 74 (86)
T ss_dssp HHHHHHHHHHCTTCSSEEEHHHHHHHHHTTT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCcCHHHHHHHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4589999999999999999999999999998 899999999999999999999999999999865
No 277
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.41 E-value=4.8e-07 Score=88.63 Aligned_cols=65 Identities=17% Similarity=0.210 Sum_probs=55.9
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++.+|+.+|+|+||+|+.+|++.+++.+ +++++++.+ +++.+|.|+||.|+|+||+.+|...
T Consensus 8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-------g~~~~~~~~----i~~~~D~d~dG~i~~~EF~~~~~~~ 72 (92)
T 1fi6_A 8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKS-------KLPILELSH----IWELSDFDKDGALTLDEFCAAFHLV 72 (92)
T ss_dssp HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHH-------SSCHHHHHH----HHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHc-------CCCHHHHHH----HHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 3568899999999999999999999999865 456766554 7788999999999999999998754
No 278
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.41 E-value=1.1e-07 Score=90.41 Aligned_cols=71 Identities=28% Similarity=0.485 Sum_probs=59.0
Q ss_pred CCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH-HhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1404 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV-EMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1404 ~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~-~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
....++++ +|+.+|.|++|.|+.+||+.+++.++ . .++++++.. +|+.+|.|++|.|+|+||+.++...
T Consensus 5 ~~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~-----~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~~ 74 (81)
T 1c7v_A 5 DDEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEE-----PLTDAEVEE----AMKEADEDGNGVIDIPEFMDLIKKS 74 (81)
T ss_dssp --CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTC-----CCCHHHHHH----HHHHHCSSGGGSEEHHHHHHHHHCC
T ss_pred ccHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCC-----CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHhh
Confidence 34567899 99999999999999999999998765 4 778877655 7888999999999999999999875
Q ss_pred cc
Q psy5584 1483 KG 1484 (2014)
Q Consensus 1483 ~~ 1484 (2014)
..
T Consensus 75 ~~ 76 (81)
T 1c7v_A 75 KN 76 (81)
T ss_dssp --
T ss_pred hh
Confidence 43
No 279
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.41 E-value=1.7e-07 Score=91.14 Aligned_cols=66 Identities=24% Similarity=0.452 Sum_probs=58.0
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++.+|+.+|+|++|.|+.+||+.+++.++. .+++++++. +|+.+|.|++|.|+|+||+.++..
T Consensus 19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-----~~~~~~~~~----l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQ-----NPTKEELDA----IIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTC-----CCCHHHHHH----HHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCeEeHHHHHHHHHH
Confidence 456899999999999999999999999997764 778887655 788899999999999999998875
No 280
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=98.40 E-value=3.2e-07 Score=88.01 Aligned_cols=66 Identities=21% Similarity=0.417 Sum_probs=58.1
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.+|.|++|.|+.+||+.+++.++. .+++++++. +|+.+|.|++|.|+|+||+.++...
T Consensus 14 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~-----~~~~~~~~~----~~~~~d~~~~g~i~~~eF~~~~~~~ 79 (85)
T 2ktg_A 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGA-----NPTKQKISE----IVKDYDKDNSGKFDQETFLTIMLEY 79 (85)
T ss_dssp HHHHHHHHHTCTTCCSEEEHHHHHHHHHTTSS-----CCCHHHHHH----HHHHHSSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56899999999999999999999999987654 788887655 7888999999999999999998763
No 281
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=98.39 E-value=3.3e-07 Score=84.52 Aligned_cols=66 Identities=24% Similarity=0.430 Sum_probs=61.9
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
+.+.++.+|..+|.|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++.
T Consensus 4 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~ 69 (71)
T 2b1u_A 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA 69 (71)
T ss_dssp THHHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred cHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence 456789999999999999999999999999998889999999999999999999999999998863
No 282
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=98.38 E-value=7.5e-07 Score=86.60 Aligned_cols=65 Identities=28% Similarity=0.456 Sum_probs=61.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|+|++|.|+.+||..++..++...+++++..+|..+|.|++|.|+++||..++..
T Consensus 20 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~ 84 (90)
T 1avs_A 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84 (90)
T ss_dssp HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence 45889999999999999999999999999999999999999999999999999999999998865
No 283
>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}
Probab=98.38 E-value=1.7e-07 Score=96.18 Aligned_cols=70 Identities=13% Similarity=0.234 Sum_probs=55.8
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL-VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l-~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
+.++.+|+.||.| +|+||.+||+.+|+.. ....+. ..+++++++ ||+++|.|+||.|+|+||+.+|....
T Consensus 15 e~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~-~~~~~~v~~----~i~~~D~d~DG~IdF~EF~~lm~~l~ 85 (121)
T 4drw_A 15 ETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLEN-QKDPLAVDK----IMKDLDQCRDGKVGFQSFFSLIAGLT 85 (121)
T ss_dssp HHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTT-SSCTTHHHH----HHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhccc-CCCHHHHHH----HHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 5689999999998 8999999999999751 111111 566666544 88899999999999999999997643
No 284
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=98.37 E-value=5.7e-07 Score=84.41 Aligned_cols=65 Identities=14% Similarity=0.319 Sum_probs=61.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|+|++|.|+.+||..++..++...+++++..+|+.+|.|++|.|+++||..++..
T Consensus 7 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~ 71 (77)
T 2joj_A 7 QEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTE 71 (77)
T ss_dssp HHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTH
T ss_pred HHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 46899999999999999999999999999998899999999999999999999999999998865
No 285
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}
Probab=98.37 E-value=1.4e-07 Score=85.66 Aligned_cols=62 Identities=32% Similarity=0.506 Sum_probs=57.7
Q ss_pred HHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1215 l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
++.+|..+|.|++|.|+.+||..++..++...++++++.+|+.+|.|++|.|+++||..++.
T Consensus 2 l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~ 63 (66)
T 3li6_A 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63 (66)
T ss_dssp CCHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence 45789999999999999999999999988778889999999999999999999999999874
No 286
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.37 E-value=3.2e-07 Score=85.84 Aligned_cols=67 Identities=21% Similarity=0.428 Sum_probs=58.4
Q ss_pred cHHHHHHHHhhh-cCCCC-CeeeHHHHHHHHHHHHHhhcCCCC--CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1406 TEDKLRIIFDMC-DNDRN-GVIDKGELAEMLRSLVEMARTTSL--TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1406 ~~e~l~~~F~~~-D~Dgd-G~Is~eEf~~~L~~l~~~~~~~~l--s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
+.++++.+|+.+ |+|++ |.|+.+||+.+++.++. .+ ++++++. +|+.+|.|++|.|+|+||+.++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~-----~~~~~~~~~~~----l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP-----SLLKGMSTLDE----MIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGG-----GSCTTSCSHHH----HHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCC-----CcCCCHHHHHH----HHHHhCCCCCCcEeHHHHHHHHHH
Confidence 456799999999 99999 99999999999998865 66 6666544 788899999999999999999875
No 287
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=98.36 E-value=4e-07 Score=90.52 Aligned_cols=72 Identities=15% Similarity=0.210 Sum_probs=56.5
Q ss_pred HHHHHHHhhhcCCC---CCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1408 DKLRIIFDMCDNDR---NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1408 e~l~~~F~~~D~Dg---dG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
++++.+|+.||+++ +|+|+.+||+.+++.++. . .++....++.++.||+++|.|+||.|+|+||+.+|....
T Consensus 11 ~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~---~-~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~ 85 (100)
T 3nxa_A 11 IVLVENFYKYVSKYSLVKNKISKSSFREMLQKELN---H-MLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT 85 (100)
T ss_dssp HHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHST---T-TTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHcc---c-cccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 56999999999964 799999999999986432 0 344222233466699999999999999999999998643
No 288
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.36 E-value=5.1e-07 Score=89.68 Aligned_cols=71 Identities=17% Similarity=0.344 Sum_probs=56.7
Q ss_pred HHHHHHHHhhhc-CCCCC-eeeHHHHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1407 EDKLRIIFDMCD-NDRNG-VIDKGELAEMLRSL-VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1407 ~e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~l-~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++.+|+.|| +|++| +|+.+||+.+++.. +...+. .++++++++ +|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~-~~~~~~v~~----l~~~~D~d~dG~I~f~EF~~~~~~~ 82 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMS-QKDPMLVEK----IMNDLDSNKDNEVDFNEFVVLVAAL 82 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTT-SCCHHHHHH----HHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccc-cccHHHHHH----HHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 356899999997 89998 99999999999862 211112 567776555 7888999999999999999998753
No 289
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=98.36 E-value=6.6e-07 Score=84.35 Aligned_cols=64 Identities=25% Similarity=0.452 Sum_probs=60.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
+.++.+|..+|.|++|.|+.+||..++..++ ..+++++..+|+.+|.|++|.|+++||..++..
T Consensus 3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~ 66 (78)
T 1k9u_A 3 DDMERIFKRFDTNGDGKISLSELTDALRTLG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNA 66 (78)
T ss_dssp CHHHHHHHHHCTTCSSEECHHHHHHHHHHHH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 4588999999999999999999999999998 899999999999999999999999999999865
No 290
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.35 E-value=4.6e-07 Score=89.32 Aligned_cols=70 Identities=11% Similarity=0.287 Sum_probs=52.2
Q ss_pred HHHHHHHhhhc-CCC-CCeeeHHHHHHHHHHHHHh-hcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDR-NGVIDKGELAEMLRSLVEM-ARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~Dg-dG~Is~eEf~~~L~~l~~~-~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.|| +|+ +|.|+.+||+.+++..... .+. .+++++ ++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~-~~~~~~----v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (95)
T 1j55_A 9 GMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQS-GKDKDA----VDKLLKDLDANGDAQVDFSEFIVFVAAI 81 (95)
T ss_dssp HHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC-------CH----HHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhccc-ccCHHH----HHHHHHHhCCCCCCcCCHHHHHHHHHHH
Confidence 56899999999 798 5899999999999862100 001 345555 4558889999999999999999998753
No 291
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.34 E-value=4.4e-07 Score=89.50 Aligned_cols=65 Identities=18% Similarity=0.248 Sum_probs=55.8
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.++++.+|+.+|+|+||+|+.+|++.+++.+ .++++++++ +++.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~-------g~~~~~~~~----i~~~~D~d~dG~i~~~EF~~~~~~~ 73 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKT-------GLPSTLLAH----IWSLCDTKDCGKLSKDQFALAFHLI 73 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTT-------TCCHHHHHH----HHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc-------CCCHHHHHH----HHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 4578999999999999999999999999853 467666544 7888999999999999999998653
No 292
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.34 E-value=3.4e-07 Score=90.99 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=56.9
Q ss_pred cHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1406 ~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
..++++.+|+.+|+|++|+|+.+|++.+++.+ .++++++.+ ||+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-------~l~~~~l~~----i~~~~D~d~dG~i~~~EF~~~~~~~ 74 (99)
T 1qjt_A 9 GNPVYEKYYRQVEAGNTGRVLALDAAAFLKKS-------GLPDLILGK----IWDLADTDGKGVLSKQEFFVALRLV 74 (99)
T ss_dssp TCTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS-------SSCHHHHHH----HHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc-------CCCHHHHHH----HHHHHCCCCCCcCCHHHHHHHHHHH
Confidence 34679999999999999999999999999853 567776555 7888999999999999999999754
No 293
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.32 E-value=1.7e-06 Score=84.69 Aligned_cols=65 Identities=17% Similarity=0.217 Sum_probs=59.3
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
..++++|..+|+|++|+|+.+|+..++..++ .+++++..+|+.+|.|+||.|+++||..++....
T Consensus 9 ~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 73 (92)
T 1fi6_A 9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLVV 73 (92)
T ss_dssp HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Confidence 4588999999999999999999999998874 7789999999999999999999999999987643
No 294
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A
Probab=98.32 E-value=8.1e-07 Score=88.25 Aligned_cols=67 Identities=15% Similarity=0.186 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhc-CCCC-cceeHHHHHHHHHH-h----cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGD-GRISFQEFLDTVVL-F----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgd-G~Is~~EF~~~l~~-l----~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++++|..+| +||+ |+|+.+||..++.. + +...+++++..+++.+|.|+||.|+|+||..++...
T Consensus 9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~ 82 (101)
T 3nso_A 9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL 82 (101)
T ss_dssp HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 367899999998 8997 99999999999986 3 467789999999999999999999999999998764
No 295
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.30 E-value=5.9e-07 Score=87.97 Aligned_cols=65 Identities=20% Similarity=0.301 Sum_probs=55.0
Q ss_pred HHHHHHHhhhcCCCCC---eeeHHHHHHHHHH-----HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy5584 1408 DKLRIIFDMCDNDRNG---VIDKGELAEMLRS-----LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG---~Is~eEf~~~L~~-----l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l 1479 (2014)
+.++.+|+.|| ++|| .|+.+||+.+++. ++. .++++++++ +|+.+|.|+||.|+|+||+.+|
T Consensus 9 ~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~-----~~~~~~v~~----~~~~~D~d~dG~I~f~EF~~~~ 78 (92)
T 3rm1_A 9 VALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEE-----IKEQEVVDK----VMETLDSNGDGECDFQEFMAFV 78 (92)
T ss_dssp HHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCC-----CCSHHHHHH----HHHHHCTTSSSSBCHHHHHHHH
T ss_pred HHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccC-----cccHHHHHH----HHHHHcCCCCCCCcHHHHHHHH
Confidence 56899999999 7766 9999999999997 433 667776555 8888999999999999999998
Q ss_pred HhC
Q psy5584 1480 RDY 1482 (2014)
Q Consensus 1480 ~~~ 1482 (2014)
...
T Consensus 79 ~~l 81 (92)
T 3rm1_A 79 AMI 81 (92)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 296
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=98.30 E-value=1.4e-06 Score=84.85 Aligned_cols=67 Identities=21% Similarity=0.387 Sum_probs=63.0
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++.+|..+|.|++|.|+.+||..++..++...+++++..+|..+|.|++|.|+++||..++...
T Consensus 8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~ 74 (92)
T 2kn2_A 8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 74 (92)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhc
Confidence 4568999999999999999999999999999989999999999999999999999999999998764
No 297
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.30 E-value=9.6e-07 Score=89.68 Aligned_cols=66 Identities=23% Similarity=0.328 Sum_probs=56.7
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
.++++.+|+.+|+|+||+|+.+||+.+++ +. .++++++.+ +|+.+|.|+||.|+|+||+.+|....
T Consensus 13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~-----~~~~~~~~~----i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 13 RLKYRQLFNSHDKTMSGHLTGPQARTILM--QS-----SLPQAQLAS----IWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp HHHHHHHHHTTSCSSCCEEEHHHHHHHHH--TT-----CCCHHHHHH----HHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHH--hC-----CCCHHHHHH----HHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 35689999999999999999999999997 22 778877655 78889999999999999999987543
No 298
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.29 E-value=1.1e-06 Score=85.69 Aligned_cols=64 Identities=23% Similarity=0.497 Sum_probs=55.1
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++.+|+.+|.|++|.|+.+||..+++.+ .++++++ +.+|+.+|.|+||.|+|+||+.++.+
T Consensus 26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~-------g~~~~~~----~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 26 LARLRSVFAACDANRSGRLEREEFRALCTEL-------RVRPADA----EAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHT-------TCCHHHH----HHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHc-------CcCHHHH----HHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 3568999999999999999999999999865 3566664 44888899999999999999998875
No 299
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor supressor, CAL binding protein; 1.30A {Homo sapiens} SCOP: a.39.1.2 PDB: 2rgi_A 4duq_A
Probab=98.28 E-value=1.5e-06 Score=86.00 Aligned_cols=67 Identities=18% Similarity=0.265 Sum_probs=59.8
Q ss_pred HHHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGDG-RISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++++|..+| +||+| +|+.+||..++.. ++...+++++..+++.+|.|+||.|+++||..++...
T Consensus 10 i~~l~~~F~~fd~~dgdgG~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 83 (98)
T 3n22_A 10 LAVLVTTFHKYSSQEGDKFKLSKGEMKELLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYAVFLALI 83 (98)
T ss_dssp HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHCHHHHCSSCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 467899999998 89995 9999999999986 4556789999999999999999999999999998764
No 300
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.27 E-value=8.8e-07 Score=89.26 Aligned_cols=68 Identities=24% Similarity=0.303 Sum_probs=59.8
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcc
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKG 1484 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~ 1484 (2014)
++++.+|+.+|+|++|.|+.+||..+++.++. .++++++.+ +|+.+|.|++|.|+|+||+.++.....
T Consensus 32 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-----~~~~~~~~~----l~~~~D~d~dg~i~~~eF~~~~~~~~~ 99 (107)
T 2d58_A 32 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGV-----PKTHLELKK----LIGEVSSGSGETFSYPDFLRMMLGKRS 99 (107)
T ss_dssp HHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTC-----CCCHHHHHH----HHHHHCSSSSSEECHHHHHHHHSSSSC
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCeEcHHHHHHHHHHccc
Confidence 56899999999999999999999999998765 788887655 778899999999999999999976553
No 301
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=98.27 E-value=7.2e-07 Score=84.73 Aligned_cols=67 Identities=28% Similarity=0.509 Sum_probs=61.7
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhc-CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~-~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.....++ +|..+|.|++|.|+.+||..++..++ ...+++++..+|+.+|.|++|.|+++||..++..
T Consensus 6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 73 (81)
T 1c7v_A 6 DEEEILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK 73 (81)
T ss_dssp -CHHHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred cHHHHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence 3456789 99999999999999999999999998 8899999999999999999999999999998854
No 302
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=98.27 E-value=9.5e-07 Score=88.52 Aligned_cols=67 Identities=13% Similarity=0.115 Sum_probs=62.8
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
....++.+|..+|+|++|.|+.+||..++..++...+++++..+|..+|.|++|.|+++||..++..
T Consensus 22 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i~~~eF~~~~~~ 88 (105)
T 1wlz_A 22 HYHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRFSS 88 (105)
T ss_dssp THHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHHC-
T ss_pred hHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence 4577999999999999999999999999999999999999999999999999999999999998864
No 303
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A
Probab=98.25 E-value=1e-06 Score=82.34 Aligned_cols=67 Identities=18% Similarity=0.288 Sum_probs=62.0
Q ss_pred cHHHHHHHHHhh-cCCCC-cceeHHHHHHHHHHhcCCC--CHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIV-DKDGD-GRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1211 ~~~~l~~lF~~~-D~dgd-G~Is~~EF~~~l~~l~~~~--~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
+.+.++.+|..+ |+|++ |.|+.+||..++..++... +++++..+|+.+|.|++|.|+++||..++..
T Consensus 3 ~~~~l~~~F~~~~D~d~~~G~i~~~el~~~l~~~g~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~ 73 (76)
T 1qx2_A 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK 73 (76)
T ss_dssp CHHHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred hHHHHHHHHHHHcccCCCcCeECHHHHHHHHHHhCCCcCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 356789999999 99999 9999999999999988777 8889999999999999999999999998865
No 304
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.25 E-value=9.5e-07 Score=86.33 Aligned_cols=67 Identities=15% Similarity=0.320 Sum_probs=58.3
Q ss_pred HHHHHHHHhhhc-CCCCC-eeeHHHHHHHHHH-----HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHH
Q psy5584 1407 EDKLRIIFDMCD-NDRNG-VIDKGELAEMLRS-----LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1407 ~e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~-----l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l 1479 (2014)
.++++.+|+.+| +|++| .|+.+||+.+++. ++. .++++++++ +|+.+|.|+||.|+|+||+.++
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~-----~~~~~~~~~----~~~~~D~d~dg~i~~~eF~~~~ 78 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDV-----QKDADAVDK----IMKELDENGDGEVDFQEFVVLV 78 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHC-----CCCHHHHHH----HHHHHHHCTTSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCC-----CCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHH
Confidence 356899999999 79999 9999999999997 554 788887655 7888999999999999999998
Q ss_pred HhC
Q psy5584 1480 RDY 1482 (2014)
Q Consensus 1480 ~~~ 1482 (2014)
...
T Consensus 79 ~~~ 81 (93)
T 1k2h_A 79 AAL 81 (93)
T ss_dssp HHH
T ss_pred HHH
Confidence 764
No 305
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=98.25 E-value=2.4e-06 Score=86.70 Aligned_cols=65 Identities=18% Similarity=0.294 Sum_probs=59.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
+.++.+|..+|+|+||+|+.+||..++. +...+++++..+|+.+|.|+||.|+++||..++....
T Consensus 14 ~~l~~~F~~~D~d~dG~I~~~El~~~l~--~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~ 78 (111)
T 2kgr_A 14 LKYRQLFNSHDKTMSGHLTGPQARTILM--QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLID 78 (111)
T ss_dssp HHHHHHHHTTSCSSCCEEEHHHHHHHHH--TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCcCcHHHHHHHHH--hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence 4588999999999999999999999998 5678899999999999999999999999999987654
No 306
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=98.25 E-value=1.3e-06 Score=86.65 Aligned_cols=68 Identities=22% Similarity=0.268 Sum_probs=61.2
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHh
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~ 1281 (2014)
.+.++++|..+|+|++|+|+.+|+..++... +.+++++..+|+.+|.|+||.|+++||..++......
T Consensus 10 ~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~--~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~ 77 (99)
T 1qjt_A 10 NPVYEKYYRQVEAGNTGRVLALDAAAFLKKS--GLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVACA 77 (99)
T ss_dssp CTHHHHHHHHHCCTTSSCCCSHHHHHHHHTS--SSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHH
Confidence 3568999999999999999999999999876 4789999999999999999999999999999875433
No 307
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=98.24 E-value=1.9e-06 Score=84.00 Aligned_cols=63 Identities=24% Similarity=0.347 Sum_probs=58.5
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|.|++|.|+.+||..++..++ .++++++.+|+.+|.|++|.|+++||..++..
T Consensus 27 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~ 89 (91)
T 2pmy_A 27 ARLRSVFAACDANRSGRLEREEFRALCTELR--VRPADAEAVFQRLDADRDGAITFQEFARGFLG 89 (91)
T ss_dssp HHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCcHHHHHHHHHHcC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 4589999999999999999999999999886 68899999999999999999999999998754
No 308
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.24 E-value=9.9e-07 Score=84.88 Aligned_cols=68 Identities=19% Similarity=0.252 Sum_probs=57.6
Q ss_pred HHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1407 ~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
.++++.+|+.+|.|++|.|+.+||+.+++.++. .+++++. +.+..+|+.+|.|++|.|+| ||+.++..
T Consensus 13 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~-----~~~~~~~-~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQ-----TYTKRET-EAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSC-----CCSHHHH-HHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcC-----CCCHHHH-HHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 456899999999999999999999999998765 7788772 12445888999999999999 99998865
No 309
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.23 E-value=4.7e-07 Score=91.70 Aligned_cols=66 Identities=12% Similarity=0.134 Sum_probs=55.9
Q ss_pred cHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1406 ~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
..++++.+|+.+|+|++|+|+.+|++.+++.+ .++++++++ |++.+|.|+||.|+|+||+.+|...
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~-------gl~~~el~~----i~~~~D~d~dG~I~~~EF~~~m~~~ 85 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKS-------KLSIPELSY----IWELSDADCDGALTLPEFCAAFHLI 85 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSS-------SCSSCCHHH----HHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHc-------CCCHHHHHH----HHHHHcCCCCCcCcHHHHHHHHHHH
Confidence 45679999999999999999999999998743 456655544 7888999999999999999998754
No 310
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A
Probab=98.22 E-value=1e-07 Score=98.77 Aligned_cols=101 Identities=17% Similarity=0.266 Sum_probs=48.9
Q ss_pred HhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHH-----HHHHhc-CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD-----TVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1205 ~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~-----~l~~l~-~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
.||..++..+++.++..+ +|.|+++||.. ++.... .....++++.+|+.+| |+|+.+||..+++.
T Consensus 4 ~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~~~~~~~~~l~~aF~~fD----G~I~~~El~~~l~~- 74 (123)
T 2kld_A 4 AIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLKLKKNTVDDISESLRQGG----GKLNFDELRQDLKG- 74 (123)
T ss_dssp ---------------------------------------------------CCSCSSTTTT----TCEEHHHHHHHTTT-
T ss_pred hcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhhcChhHHHHHHHHHHHhC----CCCCHHHHHHHHHH-
Confidence 466777777888888766 78999999998 665432 2233456788899998 99999999887643
Q ss_pred HHhhcCCCCCHHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccH
Q psy5584 1279 VEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSR 1358 (2014)
Q Consensus 1279 ~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~ 1358 (2014)
T Consensus 75 -------------------------------------------------------------------------------- 74 (123)
T 2kld_A 75 -------------------------------------------------------------------------------- 74 (123)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHh
Q psy5584 1359 AEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS 1402 (2014)
Q Consensus 1359 ~Ef~~~Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~ 1402 (2014)
+|. +..+++.++..+|.|++|.|+|+||+.++..+.
T Consensus 75 ------lG~--t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~ 110 (123)
T 2kld_A 75 ------KGH--TDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLE 110 (123)
T ss_dssp ------CCS--SHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTT
T ss_pred ------hCC--CHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 233 567788999999999999999999998875443
No 311
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.22 E-value=1.5e-06 Score=85.67 Aligned_cols=66 Identities=24% Similarity=0.309 Sum_probs=60.0
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
...++++|..+|+|+||+|+.+|+..++..+ +.++++++.+|+.+|.|+||.|+++||..++....
T Consensus 9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~--g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~ 74 (95)
T 1c07_A 9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKT--GLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS 74 (95)
T ss_dssp HHHHHHHHHHHCTTCSSEECHHHHHHHHHTT--TCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHc--CCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence 3568899999999999999999999999876 47899999999999999999999999999987644
No 312
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.22 E-value=1.9e-06 Score=90.27 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=57.1
Q ss_pred cHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1406 ~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
..++++.+|+.+| |+||+|+.+|++.+|+.+ .++++++.+ |++.+|.|+||+|+|+||+.+|....
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~-------gl~~~el~~----I~~~~D~d~dG~Ld~~EF~~am~li~ 114 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKS-------KLPNTVLGK----IWKLADVDKDGLLDDEEFALANHLIK 114 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHT-------TCCHHHHHH----HHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHh-------CcCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3567999999999 999999999999999863 678877655 77889999999999999999986543
No 313
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A
Probab=98.21 E-value=1.9e-06 Score=87.38 Aligned_cols=66 Identities=17% Similarity=0.288 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGDG-RISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.+.++++|..|| +|++| +|+.+||..++.. ++...+++++..+++.+|.|+||.|+++||..++..
T Consensus 21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~ 93 (113)
T 2lnk_A 21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC 93 (113)
T ss_dssp HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence 356899999999 89997 9999999999986 555678899999999999999999999999998865
No 314
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=98.20 E-value=8.5e-07 Score=89.07 Aligned_cols=66 Identities=11% Similarity=0.253 Sum_probs=53.5
Q ss_pred HHHHHHHhhhc-CCCC-CeeeHHHHHHHHHH-HHHhhcCCCCC-HHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRN-GVIDKGELAEMLRS-LVEMARTTSLT-DSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~Dgd-G~Is~eEf~~~L~~-l~~~~~~~~ls-~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.|| +|++ |+|+.+||+.+++. ++. .++ +++ ++.+|+.+|.|+||.|+|+||+.+|...
T Consensus 22 ~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~-----~~~~~~e----v~~li~~~D~d~dG~Idf~EF~~~~~~~ 91 (106)
T 2h2k_A 22 ETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPH-----LLKDVGS----LDEKMKSLDVNQDSELKFNEYWRLIGEL 91 (106)
T ss_dssp HHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTT-----TTTTCCC----HHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCc-----CCCCHHH----HHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 56999999999 7997 79999999999985 332 232 234 4558889999999999999999998753
No 315
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}
Probab=98.20 E-value=2.9e-06 Score=84.80 Aligned_cols=67 Identities=18% Similarity=0.288 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhc-CCCC-cceeHHHHHHHHHH-hc----CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGD-GRISFQEFLDTVVL-FS----RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgd-G~Is~~EF~~~l~~-l~----~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++++|..+| +||+ |+|+.+||..+|.. ++ ...+++++..+++.+|.|+||.|+|+||..++...
T Consensus 12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~ 85 (104)
T 3zwh_A 12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI 85 (104)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 367899999998 7885 89999999999986 43 34679999999999999999999999999998764
No 316
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.19 E-value=2.7e-06 Score=85.09 Aligned_cols=73 Identities=14% Similarity=0.299 Sum_probs=55.2
Q ss_pred HHHHHHhhhcCCCCCeeeHHHHHHHHHH-HHHhhcCCCCCH-------HHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRS-LVEMARTTSLTD-------SQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1409 ~l~~~F~~~D~DgdG~Is~eEf~~~L~~-l~~~~~~~~ls~-------~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.++.+|+.+|+|+||.|+.+||..++.. +....+. ..+. +.....+..+|+.+|.|+||.|+|+||+.++.
T Consensus 21 ~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~-~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 99 (103)
T 1snl_A 21 NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDP-KNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 99 (103)
T ss_dssp CHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCC-SSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhcc-CCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHHHHHh
Confidence 4788899999999999999999998886 2211111 2221 22345678899999999999999999999987
Q ss_pred hC
Q psy5584 1481 DY 1482 (2014)
Q Consensus 1481 ~~ 1482 (2014)
+.
T Consensus 100 ~~ 101 (103)
T 1snl_A 100 RK 101 (103)
T ss_dssp CC
T ss_pred cC
Confidence 64
No 317
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.19 E-value=1.9e-06 Score=86.53 Aligned_cols=64 Identities=19% Similarity=0.269 Sum_probs=55.2
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCc
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~ 1483 (2014)
++++.+|+.+|+ +||+|+.+|++.+++.+ +++++++.+ |++.+|.|+||.|+|+||+.+|....
T Consensus 15 ~~~~~~F~~~D~-~dG~Is~~el~~~l~~~-------gl~~~el~~----i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 15 AKYDAIFDSLSP-VNGFLSGDKVKPVLLNS-------KLPVDILGR----VWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHTTSCC-SSSCCBHHHHHHHHHTT-------TCCHHHHHH----HHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeEcHHHHHHHHHHc-------CCCHHHHHH----HHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 568899999999 99999999999999853 567777555 78889999999999999999987543
No 318
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A
Probab=98.19 E-value=1.2e-06 Score=83.50 Aligned_cols=67 Identities=24% Similarity=0.423 Sum_probs=60.9
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhc--CCCCHHHHHH----HHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS--RGHTEDKLRI----IFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~--~~~~eeel~~----lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
.+.++.+|..+|.|++|.|+.+||..++..++ ...+++++.. +|+.+|.|++|.|+++||...+..+
T Consensus 6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~~ 78 (83)
T 1yx7_A 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAEL 78 (83)
T ss_dssp CTHHHHHHHHHSSSCSSSCSHHHHHHHHHHHTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHHH
Confidence 35689999999999999999999999999988 7788888888 9999999999999999999877653
No 319
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Probab=98.19 E-value=2.8e-06 Score=83.25 Aligned_cols=67 Identities=16% Similarity=0.277 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhc-CCCC-cceeHHHHHHHHHH-hc----CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGD-GRISFQEFLDTVVL-FS----RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgd-G~Is~~EF~~~l~~-l~----~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++++|..+| +||+ |+|+.+||..++.. ++ ...+++++..+++.+|.|+||.|+++||..++...
T Consensus 9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~ 82 (93)
T 4eto_A 9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI 82 (93)
T ss_dssp HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence 467899999998 6885 89999999999986 43 34578999999999999999999999999998764
No 320
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=98.18 E-value=3.1e-06 Score=81.34 Aligned_cols=64 Identities=11% Similarity=0.145 Sum_probs=60.6
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHH---HHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK---LRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eee---l~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|.|++|.|+.+||..++..++...++++ +..+|..+|.|++|.|++ ||..++..
T Consensus 14 ~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~ 80 (86)
T 1j7q_A 14 DECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK 80 (86)
T ss_dssp HHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence 45899999999999999999999999999999999999 999999999999999999 99998865
No 321
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Probab=98.17 E-value=2.5e-06 Score=91.31 Aligned_cols=92 Identities=20% Similarity=0.214 Sum_probs=70.8
Q ss_pred HHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHH
Q psy5584 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQV 1451 (2014)
Q Consensus 1372 ~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~ 1451 (2014)
..++.+...+..+. .+.+|..+ . ...++++.+|+.+|+|++|.|+.+||+.+++.++. .++++++
T Consensus 22 ~~l~~~~~~~~~~~----~~~~~~~l-~-----~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~g~-----~~~~~~~ 86 (147)
T 1wy9_A 22 ERLEGINKQFLDDP----KYSNDEDL-P-----SKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEKLGV-----PKTHLEL 86 (147)
T ss_dssp HHHHHHHHHHTTCH----HHHTCTTH-H-----HHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHHTTC-----CCCHHHH
T ss_pred HHHHHHHHHHhcCc----chhHHHHH-H-----HHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCC-----CCCHHHH
Confidence 34555555554332 45555444 1 12367999999999999999999999999997764 7888876
Q ss_pred HHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1452 TELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1452 ~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++ +|+.+|.|++|.|+|+||+.++...
T Consensus 87 ~~----l~~~~D~d~dg~I~~~eF~~~~~~~ 113 (147)
T 1wy9_A 87 KR----LIREVSSGSEETFSYSDFLRMMLGK 113 (147)
T ss_dssp HH----HHHHHCSSCTTEECHHHHHHHHCSS
T ss_pred HH----HHHHhCCCCCCcEeHHHHHHHHHHh
Confidence 55 7788999999999999999999765
No 322
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Probab=98.17 E-value=3.7e-06 Score=82.26 Aligned_cols=66 Identities=12% Similarity=0.238 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhcCCCCc---ceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDG---RISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG---~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
.+.++.+|..+| ++|| +|+.+||..++.. ++...+++++..+|+.+|.|+||.|+++||..++..+
T Consensus 8 ~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l 81 (92)
T 3rm1_A 8 VVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMI 81 (92)
T ss_dssp HHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence 356899999999 7766 9999999999998 7778899999999999999999999999999998764
No 323
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}
Probab=98.15 E-value=4e-06 Score=83.19 Aligned_cols=66 Identities=14% Similarity=0.213 Sum_probs=59.5
Q ss_pred HHHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGDG-RISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
...++.+|..+| +|++| +|+.+||..++.. ++...+++++..+++.+|.|+||.|+++||..++..
T Consensus 9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 81 (99)
T 2y5i_A 9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81 (99)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence 456899999998 89998 9999999999986 456678999999999999999999999999998865
No 324
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.15 E-value=8.2e-07 Score=83.50 Aligned_cols=67 Identities=15% Similarity=0.428 Sum_probs=55.7
Q ss_pred cHHHHHHHHhhhcC-CCCC-eeeHHHHHHHHHH-HHHhhcCCCC-CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1406 TEDKLRIIFDMCDN-DRNG-VIDKGELAEMLRS-LVEMARTTSL-TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1406 ~~e~l~~~F~~~D~-DgdG-~Is~eEf~~~L~~-l~~~~~~~~l-s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
..++++.+|+.+|. |++| .|+.+||+.+++. ++. .+ ++++++ .+|+.+|.|+||.|+|+||+.++..
T Consensus 5 ~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~-----~~~~~~~~~----~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 5 SPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPS-----LLKGPRTLD----DLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSS-----CCSSCCCSS----HHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhh-----hcccHHHHH----HHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 45679999999999 9999 9999999999985 433 44 555544 4788899999999999999998865
No 325
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Probab=98.14 E-value=3e-06 Score=83.42 Aligned_cols=66 Identities=14% Similarity=0.149 Sum_probs=59.3
Q ss_pred HHHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGDG-RISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
...++++|..+| +|++| +|+.+||..++.. ++...++++++.+++.+|.|+||.|+++||..++..
T Consensus 11 ~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~ 83 (95)
T 2wcb_A 11 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI 83 (95)
T ss_dssp HHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence 356899999999 89998 9999999999986 455678999999999999999999999999998865
No 326
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=98.14 E-value=2.5e-06 Score=84.24 Aligned_cols=65 Identities=14% Similarity=0.262 Sum_probs=54.1
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHH-----HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRS-----LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~-----l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.||. +||.|+.+||+.+++. ++. .++++++++ +|+.+|.|+||.|+|+||+.+|...
T Consensus 9 ~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~-----~~~~~ev~~----l~~~~D~d~dG~I~f~EF~~~~~~~ 78 (96)
T 1a4p_A 9 ETMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLEN-----QKDPLAVDK----IMKDLDQCRDGKVGFQSFFSLIAGL 78 (96)
T ss_dssp HHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHH-----SCCTTHHHH----HHHHHCTTSSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CCCeECHHHHHHHHHHHccccccc-----ccCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 568999999994 5679999999999986 444 567766555 7888999999999999999998753
No 327
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=98.14 E-value=8.6e-07 Score=86.94 Aligned_cols=66 Identities=11% Similarity=0.275 Sum_probs=54.1
Q ss_pred HHHHHHHhhhcC-CCCC-eeeHHHHHHHH-HHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDN-DRNG-VIDKGELAEML-RSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~-DgdG-~Is~eEf~~~L-~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.+|. |++| .|+.+||+.++ +.++. .+++++ ++.+|+.+|.|+||.|+|+||+.++...
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~-----~~~~~~----~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 10 NSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQ-----YIRKKG----ADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCH-----HHHTTC----HHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcc-----cCCHHH----HHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 568999999999 9999 99999999999 55543 222233 3558899999999999999999998754
No 328
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.14 E-value=1.4e-06 Score=84.49 Aligned_cols=66 Identities=17% Similarity=0.387 Sum_probs=56.5
Q ss_pred HHHHHHHhhhc-CCCCC-eeeHHHHHHHHHH---HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRNG-VIDKGELAEMLRS---LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~---l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.+| +|++| .|+.+||+.+++. ++. .++++++++ +|+.+|.|+||.|+|+||+.++...
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~-----~~~~~~~~~----~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGS-----KLQDAEIAR----LMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGG-----GTTSHHHHH----HHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCC-----CCCHHHHHH----HHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 56899999999 69999 9999999999996 554 567666544 7888999999999999999998753
No 329
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.13 E-value=2.1e-06 Score=84.01 Aligned_cols=68 Identities=10% Similarity=0.329 Sum_probs=54.9
Q ss_pred HHHHHHHhhhc-CCCCC-eeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRNG-VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.+| +|++| .|+.+||+.+++.... .+ .++++++ +.+|+.+|.|+||.|+|+||+.++...
T Consensus 10 ~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~-~~--~~~~~~i----~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 10 TTMVTTFHKYSGREGSKLTLSRKELKELIKKELC-LG--EMKESSI----DDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSC-CT--TTCCTTH----HHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcC-CC--CCCHHHH----HHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 56899999999 99999 9999999999986310 00 1455554 448888999999999999999999753
No 330
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A
Probab=98.13 E-value=3.4e-06 Score=82.31 Aligned_cols=68 Identities=21% Similarity=0.317 Sum_probs=62.5
Q ss_pred HHHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGDG-RISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
...++.+|..+| +|++| .|+.+||..++.. ++...++++++.+|+.+|.|++|.|+++||..++....
T Consensus 8 ~~~l~~~F~~~D~~d~~G~~I~~~el~~~l~~~~~~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~~ 82 (93)
T 1k2h_A 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (93)
T ss_dssp HHHHHHHHHHHHTTSSCCSSCCHHHHHHHHHHHTHHHHHCCCCHHHHHHHHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCcCccCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 356899999999 79999 9999999999998 88889999999999999999999999999999987643
No 331
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1
Probab=98.13 E-value=2.1e-06 Score=80.64 Aligned_cols=68 Identities=16% Similarity=0.284 Sum_probs=60.8
Q ss_pred CcHHHHHHHHHhhcC-CCCc-ceeHHHHHHHHHH-hcCCC-CHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1210 SDAVFVRMMFNIVDK-DGDG-RISFQEFLDTVVL-FSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~-dgdG-~Is~~EF~~~l~~-l~~~~-~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.....++.+|..+|. |++| .|+.+||..++.. ++... ++++++.+|+.+|.|++|.|+++||..++..
T Consensus 4 ~~~~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~ 75 (78)
T 1cb1_A 4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKK 75 (78)
T ss_dssp CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCCcCEeCHHHHHHHHHHHhhhhcccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHH
Confidence 456779999999999 9999 9999999999986 66555 7788999999999999999999999998865
No 332
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=98.13 E-value=2.5e-06 Score=86.96 Aligned_cols=70 Identities=14% Similarity=0.382 Sum_probs=55.3
Q ss_pred HHHHHHHhhhcC-CCCC-eeeHHHHHHHHH-HHHHhhcCCC-CCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDN-DRNG-VIDKGELAEMLR-SLVEMARTTS-LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~-DgdG-~Is~eEf~~~L~-~l~~~~~~~~-ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.||. |++| .|+.+||+.+|+ .++..... . ++++++ +.+|+.+|.|+||.|+|+||+.+|...
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~-~~~~~~~v----~~l~~~~D~d~dG~I~f~EF~~~~~~~ 85 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKK-ENKNEKVI----EHIMEDLDTNADKQLSFEEFIMLMARL 85 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTT-GGGCHHHH----HHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcc-cccCHHHH----HHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence 568999999994 9999 999999999998 55420000 1 456654 458889999999999999999998754
No 333
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=98.12 E-value=1.9e-06 Score=87.21 Aligned_cols=67 Identities=16% Similarity=0.183 Sum_probs=59.5
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
....++++|..+|+|++|+|+.+|+..++..++ .+++++..+|+.+|.|++|.|+++||..++....
T Consensus 20 ~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~ 86 (110)
T 1iq3_A 20 QREYYVNQFRSLQPDPSSFISGSVAKNFFTKSK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLIV 86 (110)
T ss_dssp SHHHHHHHHHHHCCSSSSEEEHHHHHHHCCSSS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 346689999999999999999999999997654 6778899999999999999999999999987643
No 334
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=98.12 E-value=4.2e-06 Score=84.21 Aligned_cols=66 Identities=11% Similarity=0.137 Sum_probs=61.8
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
...++.+|..+|+|++|.|+.+||..++..++...+++++..+|..+|.|++|.|+++||..++..
T Consensus 31 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~~ 96 (107)
T 2d58_A 31 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 96 (107)
T ss_dssp HHHHHHHHTTSCCCTTSCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHSS
T ss_pred HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence 356899999999999999999999999999999999999999999999999999999999998753
No 335
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A
Probab=98.11 E-value=3.5e-06 Score=83.00 Aligned_cols=66 Identities=12% Similarity=0.205 Sum_probs=54.5
Q ss_pred HHHHHHHHHhhc-CCC-CcceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDG-DGRISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dg-dG~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
...++++|..+| +|+ +|+|+.+||..++.. ++...+++++..+++.+|.|+||.|+++||..++..
T Consensus 8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (95)
T 1j55_A 8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA 80 (95)
T ss_dssp HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence 456899999999 798 589999999999986 344567789999999999999999999999999865
No 336
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A
Probab=98.08 E-value=6.3e-06 Score=82.73 Aligned_cols=64 Identities=17% Similarity=0.251 Sum_probs=58.5
Q ss_pred HHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1213 ~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
..++++|..+|+ +||+|+.+|+..++..+ +.+++++..+|+.+|.|+||.|+++||..++....
T Consensus 15 ~~~~~~F~~~D~-~dG~Is~~el~~~l~~~--gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~ 78 (106)
T 1eh2_A 15 AKYDAIFDSLSP-VNGFLSGDKVKPVLLNS--KLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY 78 (106)
T ss_dssp HHHHHHHTTSCC-SSSCCBHHHHHHHHHTT--TCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeEcHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence 458899999999 99999999999999876 47899999999999999999999999999987654
No 337
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.08 E-value=3.5e-06 Score=112.41 Aligned_cols=123 Identities=12% Similarity=0.191 Sum_probs=95.3
Q ss_pred cccccHHHHHHHhCCCChH-HHHHHHHHHH-------ccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCe
Q psy5584 1353 RTSLSRAEFASALGMKSDA-VFVRMMFNIV-------DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1424 (2014)
Q Consensus 1353 ~g~ls~~Ef~~~Lg~~~s~-~~l~~lf~~~-------D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~ 1424 (2014)
+|.|+.+|+.+.+....++ .++.++++.. |.+++|.|+|+||+.++..+. ..++++.+|+.||.|++|.
T Consensus 169 dG~Is~kEl~~~l~~~~~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R~EI~eiF~~y~~dg~~~ 245 (816)
T 3qr0_A 169 KNKIPVKAIQKCLSKDKDDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ERSEIEGIFKELSKNKGNI 245 (816)
T ss_dssp SSEEEHHHHHHHHCSCHHHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CCTHHHHHHHHHTTTSSSE
T ss_pred CCCCCHHHHHHHHHhcCChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CHHHHHHHHHHHccCCCCc
Confidence 4599999999998654433 4588888888 678899999999999998874 3467999999999999999
Q ss_pred eeHHHHHHHHHHHHHhhcCC-----CCCHHHHHHHHHHHHHHcCC--C----CCCcccHHHHHHHHHhCc
Q psy5584 1425 IDKGELAEMLRSLVEMARTT-----SLTDSQVTELIDGMFQDAGL--D----SKDFLTYQDFKLMMRDYK 1483 (2014)
Q Consensus 1425 Is~eEf~~~L~~l~~~~~~~-----~ls~~e~~~li~~if~~~D~--d----~dG~Is~eEF~~~l~~~~ 1483 (2014)
||. ||.++|+....+.... .++++++.+ |++.++. | ++|.|++++|..+|....
T Consensus 246 mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~----iI~kye~~~~~~~~~~g~LsldgF~~yL~S~~ 310 (816)
T 3qr0_A 246 TTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEA----LINDYESAVNKKGKKKGQLTKEGLLYFLMCEE 310 (816)
T ss_dssp EHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHH----HHHHHHHHHHGGGCBTTEECHHHHHHHHHSGG
T ss_pred ccH-HHHHHHHHhCCccccccccccccCHHHHHH----HHHHhccccchhhhccCCccHHHHHHHhhccc
Confidence 999 9999999764211000 156777666 4445554 3 689999999999998643
No 338
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=98.07 E-value=8.8e-06 Score=85.29 Aligned_cols=66 Identities=20% Similarity=0.248 Sum_probs=59.8
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
....++++|..+| |+||+|+.+|+..+|... +++++++..+|+..|.|+||.|+++||..++....
T Consensus 49 e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~~--gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~ 114 (139)
T 2jq6_A 49 DKPTYDEIFYTLS-PVNGKITGANAKKEMVKS--KLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIK 114 (139)
T ss_dssp THHHHHHHHHHSC-CSSSEEEHHHHHHHHHHT--TCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-CCCCeECHHHHHHHHHHh--CcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 3567899999999 999999999999999885 47899999999999999999999999999987654
No 339
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=98.07 E-value=5.7e-06 Score=77.19 Aligned_cols=62 Identities=16% Similarity=0.162 Sum_probs=52.7
Q ss_pred CcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcC-CC----CCCcccHHHHHHHH
Q psy5584 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG-LD----SKDFLTYQDFKLMM 1479 (2014)
Q Consensus 1405 ~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D-~d----~dG~Is~eEF~~~l 1479 (2014)
.+.++++.+|+.| +|++|+|+.+||++ .++++++++ |++.+| .| ++|.|+|+||+.+|
T Consensus 7 ~~~eel~eAFr~f-~dg~G~It~~eLr~------------~lt~eevd~----~i~~~d~~dg~~~~dG~idY~eF~~~m 69 (75)
T 1h8b_A 7 DTAEQVIASFRIL-ASDKPYILAEELRR------------ELPPDQAQY----CIKRMPAYSGPGSVPGALDYAAFSSAL 69 (75)
T ss_dssp STHHHHHHHHHHH-TTSCSSBCHHHHHH------------HSCHHHHHH----HHHHSCSCCCSSCCTTCBCHHHHHHHH
T ss_pred CCHHHHHHHHHHH-hcCCCCcCHHHHHh------------cCCHHHHHH----HHHhcCcccCCCCCCCcCcHHHHHHHH
Confidence 4678899999999 99999999999998 257888666 677799 56 58999999999998
Q ss_pred HhCc
Q psy5584 1480 RDYK 1483 (2014)
Q Consensus 1480 ~~~~ 1483 (2014)
...+
T Consensus 70 ~~~~ 73 (75)
T 1h8b_A 70 YGES 73 (75)
T ss_dssp TCCS
T ss_pred hccC
Confidence 7654
No 340
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.05 E-value=3.3e-06 Score=112.69 Aligned_cols=123 Identities=11% Similarity=0.144 Sum_probs=99.9
Q ss_pred hhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhc-------cCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHHHH
Q psy5584 1221 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC-------DNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVT 1293 (2014)
Q Consensus 1221 ~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~-------D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e~~ 1293 (2014)
.+|+|+||.|+++|+...+.... ..+.++..+++.. |.+++|.|+++||..+++.+.
T Consensus 163 ~fd~n~dG~Is~kEl~~~l~~~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~-------------- 226 (816)
T 3qr0_A 163 TTVEMEKNKIPVKAIQKCLSKDK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL-------------- 226 (816)
T ss_dssp HHTSCCSSEEEHHHHHHHHCSCH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC--------------
T ss_pred hccCCCCCCCCHHHHHHHHHhcC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC--------------
Confidence 58999999999999999876432 1135677888877 678899999999999876521
Q ss_pred HHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHHHhCCCChHHH
Q psy5584 1294 ELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF 1373 (2014)
Q Consensus 1294 ~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~~Lg~~~s~~~ 1373 (2014)
...+
T Consensus 227 ----------------------------------------------------------------------------~R~E 230 (816)
T 3qr0_A 227 ----------------------------------------------------------------------------ERSE 230 (816)
T ss_dssp ----------------------------------------------------------------------------CCTH
T ss_pred ----------------------------------------------------------------------------CHHH
Confidence 1235
Q ss_pred HHHHHHHHccCCCCceeHHHHHHHHHHHhcC----------CcHHHHHHHHhhhcC--C----CCCeeeHHHHHHHHHH
Q psy5584 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRG----------HTEDKLRIIFDMCDN--D----RNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1374 l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~----------~~~e~l~~~F~~~D~--D----gdG~Is~eEf~~~L~~ 1436 (2014)
++.+|..+|.|++|.|+. ||..++...... .++++++.+++.+|. | ++|.|+.++|..+|.+
T Consensus 231 I~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S 308 (816)
T 3qr0_A 231 IEGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMC 308 (816)
T ss_dssp HHHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHS
T ss_pred HHHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhc
Confidence 899999999999999999 999999987643 357789999999987 5 7899999999999974
No 341
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=98.05 E-value=5.6e-06 Score=81.90 Aligned_cols=70 Identities=23% Similarity=0.361 Sum_probs=56.3
Q ss_pred HHHHHHHhhhc-CCCCC-eeeHHHHHHHHH-HHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCD-NDRNG-VIDKGELAEMLR-SLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D-~DgdG-~Is~eEf~~~L~-~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.+| +|++| .|+.+||+.+++ .++...+. .++++++++ +|+.+|.|+||.|+|+||+.++...
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~-~~~~~~~~~----l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQN-QKDPGVLDR----MMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHH-CCCTHHHHH----HHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccc-cCCHHHHHH----HHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46899999998 99999 999999999998 34311111 667776544 7888999999999999999988753
No 342
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A
Probab=98.04 E-value=5.1e-06 Score=81.28 Aligned_cols=67 Identities=16% Similarity=0.180 Sum_probs=58.9
Q ss_pred HHHHHHHHHhhc-CCCCc-ceeHHHHHHHHHHhcC--CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGDG-RISFQEFLDTVVLFSR--GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~l~~--~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++.+|..+| +|++| .|+.+||..++..... ..++++++.+|+.+|.|+||.|+++||..++...
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~ 79 (92)
T 2kax_A 9 LTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML 79 (92)
T ss_dssp HHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTTTCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 356899999999 99999 9999999999986321 2778899999999999999999999999998764
No 343
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A
Probab=98.03 E-value=4.8e-06 Score=80.60 Aligned_cols=66 Identities=14% Similarity=0.287 Sum_probs=60.7
Q ss_pred HHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH---hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVD-KDGDG-RISFQEFLDTVVL---FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1213 ~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~---l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
..++.+|..+| +|++| .|+.+||..++.. ++...++++++.+|+.+|.|++|.|+++||..++...
T Consensus 10 ~~l~~~F~~~D~~d~~G~~i~~~el~~~l~~~~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~ 80 (90)
T 1k8u_A 10 GLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL 80 (90)
T ss_dssp HHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCcCCHHHHHHHHHHhcccCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 46889999999 59999 9999999999997 7777888999999999999999999999999988654
No 344
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=97.99 E-value=3.7e-06 Score=83.62 Aligned_cols=67 Identities=15% Similarity=0.274 Sum_probs=52.8
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHH-----HHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRS-----LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~-----l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
++++.+|+.||.+ +|.|+.+||+.+++. ++.. + .+++++ ++.+|+++|.|+||.|+|+||+.+|...
T Consensus 10 ~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~-~--~~~~~e----v~~l~~~~D~d~dG~I~f~EF~~~~~~~ 81 (100)
T 1psr_A 10 IGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSAC-D--KKGTNY----LADVFEKKDKNEDKKIDFSEFLSLLGDI 81 (100)
T ss_dssp HHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHH-H--HTTCCG----GGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccc-c--ccCHHH----HHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 5689999999976 899999999999986 3320 0 123344 4458889999999999999999998753
No 345
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Probab=97.99 E-value=1.6e-05 Score=78.89 Aligned_cols=67 Identities=12% Similarity=0.090 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhcCCC---CcceeHHHHHHHHHHhc-CCC----CHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDG---DGRISFQEFLDTVVLFS-RGH----TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dg---dG~Is~~EF~~~l~~l~-~~~----~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++++|..+|.++ +|+|+.+||..++.... ... +++++..+++.+|.|+||.|+|+||..++...
T Consensus 10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~ 84 (100)
T 3nxa_A 10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI 84 (100)
T ss_dssp HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 357899999999964 79999999999998743 222 26889999999999999999999999998764
No 346
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Probab=97.97 E-value=6.9e-06 Score=82.44 Aligned_cols=66 Identities=15% Similarity=0.164 Sum_probs=56.8
Q ss_pred HHHHHHHHHhhc-CCCC-cceeHHHHHHHHHH-hcCCCC-HHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVD-KDGD-GRISFQEFLDTVVL-FSRGHT-EDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D-~dgd-G~Is~~EF~~~l~~-l~~~~~-eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.+.++++|..|| +|++ |+|+.+||..++.. ++...+ ++++..+++.+|.|+||.|+|+||..++..
T Consensus 21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~ 90 (106)
T 2h2k_A 21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGE 90 (106)
T ss_dssp HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence 357899999999 7996 79999999999986 543333 478999999999999999999999998865
No 347
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A
Probab=97.96 E-value=4.1e-06 Score=82.06 Aligned_cols=67 Identities=7% Similarity=0.079 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhcC-CCCc-ceeHHHHHHHH-HHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDK-DGDG-RISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~-dgdG-~Is~~EF~~~l-~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
...++.+|..+|. |++| .|+.+||..++ ..++...+.+++..+|+.+|.|+||.|+++||..++...
T Consensus 9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~ 78 (93)
T 1xk4_A 9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM 78 (93)
T ss_dssp HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 3568999999999 9999 99999999999 556544445678999999999999999999999998653
No 348
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.95 E-value=8.1e-06 Score=81.60 Aligned_cols=68 Identities=13% Similarity=0.213 Sum_probs=55.9
Q ss_pred CCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHH-----hcCCCCH-----------HHHHHHHHhccCCCCCcccHHHHH
Q psy5584 1209 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-----FSRGHTE-----------DKLRIIFDMCDNDRNGVIDKGELA 1272 (2014)
Q Consensus 1209 ~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~-----l~~~~~e-----------eel~~lF~~~D~D~dG~Is~eEF~ 1272 (2014)
.++...++.+|..+|.|+||.|+.+||..++.. ++...++ ..+..+|+.+|.|+||.|+++||.
T Consensus 16 ~~~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~g~~~~~~~~~~~~e~~~~~~~~~~~~~D~d~dG~Is~~EF~ 95 (103)
T 1snl_A 16 DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFL 95 (103)
T ss_dssp CSCCCCHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHH
T ss_pred CcccCCHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHhccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCCcCCHHHHH
Confidence 334445889999999999999999999999985 3433332 348899999999999999999999
Q ss_pred HHHH
Q psy5584 1273 EMLR 1276 (2014)
Q Consensus 1273 ~~l~ 1276 (2014)
.++.
T Consensus 96 ~~~~ 99 (103)
T 1snl_A 96 ASTQ 99 (103)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8874
No 349
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*
Probab=97.95 E-value=1.5e-05 Score=81.06 Aligned_cols=65 Identities=14% Similarity=0.131 Sum_probs=58.0
Q ss_pred HHHHHHHHhhcC-CCCc-ceeHHHHHHHHH-HhcCC-----CCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVDK-DGDG-RISFQEFLDTVV-LFSRG-----HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1213 ~~l~~lF~~~D~-dgdG-~Is~~EF~~~l~-~l~~~-----~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
..++.+|..+|. |++| +|+.+||..++. .++.. .++++++.+|+.+|.|+||.|+++||..++..
T Consensus 12 ~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~ 84 (113)
T 1xk4_C 12 ETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR 84 (113)
T ss_dssp HHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHH
Confidence 568999999995 9999 999999999998 55532 57899999999999999999999999999865
No 350
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A
Probab=97.85 E-value=1.7e-05 Score=78.28 Aligned_cols=66 Identities=23% Similarity=0.318 Sum_probs=58.7
Q ss_pred HHHHHHHHhhc-CCCCc-ceeHHHHHHHHHH-h----cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHH
Q psy5584 1213 VFVRMMFNIVD-KDGDG-RISFQEFLDTVVL-F----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278 (2014)
Q Consensus 1213 ~~l~~lF~~~D-~dgdG-~Is~~EF~~~l~~-l----~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~ 1278 (2014)
..++.+|..+| +|++| .|+.+||..++.. + +...++++++.+|+.+|.|++|.|+++||..++...
T Consensus 13 ~~l~~~F~~~Dd~d~~G~~I~~~el~~~l~~~~~~~~~~~~~~~~~~~l~~~~D~~~dg~I~~~EF~~~~~~~ 85 (99)
T 1qls_A 13 ESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL 85 (99)
T ss_dssp HHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCcCeeCHHHHHHHHHHHcchhccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 46889999998 99999 9999999999984 3 256788899999999999999999999999988653
No 351
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=97.82 E-value=6.2e-05 Score=76.49 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=63.3
Q ss_pred cCcCHHHHHHHhCCCCcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHH
Q psy5584 1195 TSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274 (2014)
Q Consensus 1195 ~~Ls~~El~~~L~~~~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~ 1274 (2014)
-.|+.+|.++ ++++|..+|+ ++|+|+-+|...++... +++++++..+++..|.|+||.|+++||..+
T Consensus 25 W~it~ee~~~----------y~~iF~~lD~-~dG~Isg~elr~~~~~s--gLp~~~L~~Iw~laD~d~dG~Ld~~EF~~a 91 (121)
T 3fia_A 25 WAITVEERAK----------HDQQFHSLKP-ISGFITGDQARNFFFQS--GLPQPVLAQIWALADMNNDGRMDQVEFSIA 91 (121)
T ss_dssp SCCCHHHHHH----------HHHHHHHTCC-BTTBEEHHHHHHHHGGG--CCCHHHHHHHHHHHCTTCSSEECHHHHHHH
T ss_pred CCCCHHHHHH----------HHHHHHHhCC-CCCeECHHHHHHHHHHc--CCCHHHHHHHHHHHcCCCCCcCCHHHHHHH
Confidence 3567666644 8899999999 89999999999999865 678999999999999999999999999999
Q ss_pred HHHHH
Q psy5584 1275 LRSLV 1279 (2014)
Q Consensus 1275 l~~~~ 1279 (2014)
|.-..
T Consensus 92 M~Li~ 96 (121)
T 3fia_A 92 MKLIK 96 (121)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 352
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Probab=97.80 E-value=1.7e-05 Score=78.27 Aligned_cols=65 Identities=9% Similarity=0.112 Sum_probs=56.7
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHH-----hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVL-----FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~-----l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
...++++|..+|. +||+|+.+||..++.. ++...+++++..+++.+|.|+||.|+++||..++..
T Consensus 8 ~~~l~~~F~~fD~-~dg~Is~~El~~~l~~~~~~~lg~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 77 (96)
T 1a4p_A 8 METMMFTFHKFAG-DKGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAG 77 (96)
T ss_dssp HHHHHHHHHHHHG-GGCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCeECHHHHHHHHHHHcccccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 4568999999994 5679999999999976 444567889999999999999999999999998865
No 353
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Probab=97.79 E-value=9.7e-06 Score=80.60 Aligned_cols=65 Identities=20% Similarity=0.261 Sum_probs=56.4
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHH-----hcC--CCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVL-----FSR--GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~-----l~~--~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
...++++|..+|.+ +|+|+.+||..++.. ++. ..+++++..+++.+|.|+||.|+++||..++..
T Consensus 9 ~~~l~~~F~~fD~~-~g~Is~~El~~~l~~~~~~~lg~~~~~~~~ev~~l~~~~D~d~dG~I~f~EF~~~~~~ 80 (100)
T 1psr_A 9 IIGMIDMFHKYTRR-DDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGD 80 (100)
T ss_dssp HHHHHHHHHHTCCT-TSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCC-CCeECHHHHHHHHHHHhHhhhccccccCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 35689999999977 799999999999986 333 456778999999999999999999999999865
No 354
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Probab=97.77 E-value=3.4e-05 Score=78.42 Aligned_cols=63 Identities=13% Similarity=0.205 Sum_probs=54.4
Q ss_pred HHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1408 e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.+++.+|+.+|+ ++|+|+.+|++.++... +++++++.+ |++.+|.|+||+|+++||+.+|.--
T Consensus 33 ~~y~~iF~~lD~-~dG~Isg~elr~~~~~s-------gLp~~~L~~----Iw~laD~d~dG~Ld~~EF~~aM~Li 95 (121)
T 3fia_A 33 AKHDQQFHSLKP-ISGFITGDQARNFFFQS-------GLPQPVLAQ----IWALADMNNDGRMDQVEFSIAMKLI 95 (121)
T ss_dssp HHHHHHHHHTCC-BTTBEEHHHHHHHHGGG-------CCCHHHHHH----HHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCeECHHHHHHHHHHc-------CCCHHHHHH----HHHHHcCCCCCcCCHHHHHHHHHHH
Confidence 468899999998 89999999999999742 788877655 7788999999999999999988643
No 355
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.36 E-value=0.00033 Score=65.24 Aligned_cols=58 Identities=17% Similarity=0.146 Sum_probs=52.5
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhcc-CC----CCCcccHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCD-ND----RNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D-~D----~dG~Is~eEF~~~l~ 1276 (2014)
+.+++++.|+.| ++++|+|+..|+.. .++++++..+++.+| .| ++|.|+|+||..++.
T Consensus 8 ~~eel~eAFr~f-~dg~G~It~~eLr~-------~lt~eevd~~i~~~d~~dg~~~~dG~idY~eF~~~m~ 70 (75)
T 1h8b_A 8 TAEQVIASFRIL-ASDKPYILAEELRR-------ELPPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY 70 (75)
T ss_dssp THHHHHHHHHHH-TTSCSSBCHHHHHH-------HSCHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred CHHHHHHHHHHH-hcCCCCcCHHHHHh-------cCCHHHHHHHHHhcCcccCCCCCCCcCcHHHHHHHHh
Confidence 567899999999 99999999999999 378999999999999 57 589999999999874
No 356
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=97.31 E-value=5e-05 Score=79.63 Aligned_cols=68 Identities=16% Similarity=0.297 Sum_probs=55.8
Q ss_pred HHHHHHHhhhcCC-CCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccc
Q psy5584 1408 DKLRIIFDMCDND-RNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDF 1486 (2014)
Q Consensus 1408 e~l~~~F~~~D~D-gdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l 1486 (2014)
..+..+|..+|.| +||.|+..|+..+++.+. . .+..++.+|+.+|.|+||+||++||+.++...++.+
T Consensus 77 ~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--------~---~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg~~~~e~ 145 (151)
T 1sra_A 77 FPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--------P---MEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKDI 145 (151)
T ss_dssp HHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--------T---TGGGHHHHHHHHCTTCSSSEEHHHHHHHTTCCGGGC
T ss_pred hHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--------C---hHHHHHHHHHHhCCCCCCcCCHHHHHHHhCCCHHHH
Confidence 4588999999997 999999999999886321 1 233567799999999999999999999998766543
No 357
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=97.14 E-value=6.9e-05 Score=75.71 Aligned_cols=95 Identities=15% Similarity=0.163 Sum_probs=70.1
Q ss_pred hHHhhHHHHHHHh-hhhhhHHHHHHHHHHhCCccCCcccccccCcccccccccCHHHHHhhhC--CC---CChHHHHHHH
Q psy5584 3 SEQLDRRQLRERR-QKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG--MK---SDAVFVRMMF 76 (2014)
Q Consensus 3 ~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~l~~~~~~~~~~y~~~v~ps~~i~~~EF~~al~--~r---f~~s~~~~~f 76 (2014)
.|+|++.+..++= .++|+..|++=. -|. -.+-+|++.|+.++|...+. ++ ....++..+|
T Consensus 10 pe~l~~L~~~t~fs~~elk~~y~~F~---~g~-----------~~k~cp~G~i~~e~F~~i~~~ffp~~~~p~~~~~~lF 75 (118)
T 1tuz_A 10 PSDFAQLQKYMEYSTKKVSDVLKLFE---DGE-----------MAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALF 75 (118)
T ss_dssp HHHHHHHHHHHHHCCCCHHHHHHHHH---TSG-----------GGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHcccCHHHHHHHHHHHc---ccc-----------ccccCCCCCCCHHHHHHHHHHhCcCCCCHHHHHHHHH
Confidence 3566666655543 336777665432 010 02458999999999998764 22 4578999999
Q ss_pred HhhccCC--------CCcccHHHHHhhhhhccCCCHHHHHHHH
Q psy5584 77 NIVDKDG--------DGRISFQEFLDTVVLFSRGHTEDKLRII 111 (2014)
Q Consensus 77 ~~fD~d~--------~g~I~f~Efi~~~~~l~~~~~~d~l~~~ 111 (2014)
+.||+|+ +|.|+|+||++.+|++.+|..+|||.|+
T Consensus 76 ~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll~rG~~edKLewa 118 (118)
T 1tuz_A 76 QSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGGRPEDKLEWS 118 (118)
T ss_dssp HHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHSCCCSCCCCCC
T ss_pred HHHhcccccccccCCCCeEeHHHHHHHHHHhcCCCHHHhhccC
Confidence 9999985 7999999999999999999998888653
No 358
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.3
Probab=97.03 E-value=0.00017 Score=75.59 Aligned_cols=64 Identities=23% Similarity=0.247 Sum_probs=56.2
Q ss_pred cHHHHHHHHHhhcCC-CCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~d-gdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
....++-+|..+|.| +||.|+..|+..++..+. .++.-+..+|+.+|.|+||.||.+||...+.
T Consensus 75 ~~~~l~W~F~~lD~n~~DG~Isr~EL~~i~~~l~--~~e~cv~~ff~~cD~d~Dg~ISl~Ew~~Clg 139 (151)
T 1sra_A 75 YIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 139 (151)
T ss_dssp GHHHHHHHHHHHCCTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSSEEHHHHHHHTT
T ss_pred chhHHHhHHHHHCCCCCCCcCcHHHHHHHHHHhc--ChHHHHHHHHHHhCCCCCCcCCHHHHHHHhC
Confidence 345789999999997 999999999998886543 5677899999999999999999999999874
No 359
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=96.40 E-value=0.00082 Score=76.64 Aligned_cols=66 Identities=17% Similarity=0.295 Sum_probs=53.6
Q ss_pred HHHHHHhhhcC-CCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCccc
Q psy5584 1409 KLRIIFDMCDN-DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGD 1485 (2014)
Q Consensus 1409 ~l~~~F~~~D~-DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~ 1485 (2014)
.+..+|..+|. |+||.|+..|+..+++.+ .. .+..+..+|+..|.|+||+||++||...+......
T Consensus 156 ~v~w~F~~lD~~n~dg~l~~~El~~i~~~l---------~~--~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~~~~~~ 222 (229)
T 1nub_A 156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPL---------IP--MEHCTTRFFETCDLDNDKYIALDEWAGCFGIKQKD 222 (229)
T ss_dssp HHHHHHHHHTTTTCSSEECTTTTGGGGSTT---------ST--TGGGHHHHHHHHCTTCSSCEEHHHHHHHTTCCGGG
T ss_pred HHHHHHHHhCCCCCCCCCCHHHHHHHHHHH---------hh--HHHHHHHHHHHcCCCCCCcCCHHHHHHHhCCCccc
Confidence 47888999999 899999999999988532 11 23346779999999999999999999998765543
No 360
>1tuz_A Diacylglycerol kinase alpha; transferase, HR532, nesgc, structural genomics, PSI, protein structure initiative; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=96.25 E-value=0.0043 Score=62.68 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHccCC--------CCceeHHHHHHHHHHHhcCCcHHHHH
Q psy5584 1370 DAVFVRMMFNIVDKDG--------DGRISFQEFLDTVVLFSRGHTEDKLR 1411 (2014)
Q Consensus 1370 s~~~l~~lf~~~D~Dg--------dG~Isf~EFl~~l~~~~~~~~~e~l~ 1411 (2014)
....+..+|..+|.|+ +|.|+|.||+..+..+.++..+++|+
T Consensus 67 p~~~~~~lF~~Fd~~~~~~~~~~~~g~I~fkefi~~LSll~rG~~edKLe 116 (118)
T 1tuz_A 67 PRHLSLALFQSFETGHCLNETNVTKDVVCLNDVSCYFSLLEGGRPEDKLE 116 (118)
T ss_dssp CHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHHHHHHHHHSCCCSCCCC
T ss_pred HHHHHHHHHHHHhcccccccccCCCCeEeHHHHHHHHHHhcCCCHHHhhc
Confidence 4566788999999875 89999999999999998888777653
No 361
>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A*
Probab=95.77 E-value=0.0028 Score=72.19 Aligned_cols=63 Identities=24% Similarity=0.260 Sum_probs=54.7
Q ss_pred HHHHHHHHHhhcC-CCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDK-DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~-dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
...+..+|..+|. |+||.|+..|+..++..+. ..+.-++.+|+..|.|+||.||++||...+.
T Consensus 154 ~~~v~w~F~~lD~~n~dg~l~~~El~~i~~~l~--~~~~c~~~~~~~cD~n~D~~is~~Ew~~cf~ 217 (229)
T 1nub_A 154 IFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLI--PMEHCTTRFFETCDLDNDKYIALDEWAGCFG 217 (229)
T ss_dssp HHHHHHHHHHHTTTTCSSEECTTTTGGGGSTTS--TTGGGHHHHHHHHCTTCSSCEEHHHHHHHTT
T ss_pred hHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHh--hHHHHHHHHHHHcCCCCCCcCCHHHHHHHhC
Confidence 3468999999999 8999999999999886543 2556689999999999999999999999874
No 362
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=82.08 E-value=2.9 Score=54.07 Aligned_cols=66 Identities=23% Similarity=0.278 Sum_probs=58.2
Q ss_pred cHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1211 ~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
+.....++|...|.. +|+|+=.+-..++. ..+++.+.+..+|...|.|+||.++.+||.-+|.-..
T Consensus 456 ~~~~y~~~F~~~~~~-~g~i~g~~a~~~~~--~s~Lp~~~L~~IW~l~D~~~~g~L~~~eF~~am~Li~ 521 (550)
T 2qpt_A 456 DKSKYDEIFYNLAPA-DGKLSGSKAKTWMV--GTKLPNSVLGRIWKLSDVDRDGMLDDEEFALASHLIE 521 (550)
T ss_dssp THHHHHHHHHHTCCS-SSEECHHHHHHHHH--HTTCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-CCeecHHHHHHHHH--HcCCCHHHHHHHhcccCCCCCCcCCHHHHHHHHHHHH
Confidence 556789999999964 69999999999886 4578999999999999999999999999999987644
No 363
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=82.03 E-value=0.27 Score=64.21 Aligned_cols=56 Identities=13% Similarity=0.049 Sum_probs=52.1
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+.+|.+..+.+....|..+|.++++||++||.+|+.+| +|+|+|.
T Consensus 354 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~ 414 (573)
T 3uto_A 354 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414 (573)
T ss_dssp CSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred CCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCc
Confidence 6999999999999999999999999999999999999999999999988 4888775
No 364
>2qpt_A EH domain-containing protein-2; protein-nucleotide complex, membrane protein, endocytosis; HET: ANP; 3.10A {Mus musculus}
Probab=79.70 E-value=2.8 Score=54.13 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=53.8
Q ss_pred cHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1406 ~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
...+...+|...|. .+|+|+-++.+.++... +|+.+.+.+ |+..+|.|+||+++.+||.-.|.-
T Consensus 456 ~~~~y~~~F~~~~~-~~g~i~g~~a~~~~~~s-------~Lp~~~L~~----IW~l~D~~~~g~L~~~eF~~am~L 519 (550)
T 2qpt_A 456 DKSKYDEIFYNLAP-ADGKLSGSKAKTWMVGT-------KLPNSVLGR----IWKLSDVDRDGMLDDEEFALASHL 519 (550)
T ss_dssp THHHHHHHHHHTCC-SSSEECHHHHHHHHHHT-------TCCHHHHHH----HHHHHCSSCSSSEEHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCCeecHHHHHHHHHHc-------CCCHHHHHH----HhcccCCCCCCcCCHHHHHHHHHH
Confidence 45678899999995 46999999999998642 788888766 777899999999999999988753
No 365
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=77.58 E-value=0.6 Score=54.85 Aligned_cols=53 Identities=11% Similarity=0.106 Sum_probs=46.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
+||.+++..+.+.+|.++...+. +.+|+++++||++||.++|.+| +++|+|.+
T Consensus 210 ~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k 267 (275)
T 3hyh_A 210 LPFDDESIPVLFKNISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 267 (275)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcccc
Confidence 58999999999999999887664 5689999999999999999998 48898764
No 366
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=75.47 E-value=14 Score=37.31 Aligned_cols=85 Identities=13% Similarity=0.066 Sum_probs=63.7
Q ss_pred CCChHHHHHHHHHHHccCC---CCceeHHHHHHHHHHHh----cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH
Q psy5584 1367 MKSDAVFVRMMFNIVDKDG---DGRISFQEFLDTVVLFS----RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439 (2014)
Q Consensus 1367 ~~~s~~~l~~lf~~~D~Dg---dG~Isf~EFl~~l~~~~----~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~ 1439 (2014)
++....+++.+|..+-.-| ...|+-..|..++..-. +..+..+...+|..+ ..+...|+.++|..+|..+..
T Consensus 17 ~~~~~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA~ 95 (125)
T 1pul_A 17 FNWDDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVAE 95 (125)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHHH
Confidence 4556777889888887644 36799999999988732 446677899999999 788889999999999998876
Q ss_pred hh--cCCCCCHHH-HHH
Q psy5584 1440 MA--RTTSLTDSQ-VTE 1453 (2014)
Q Consensus 1440 ~~--~~~~ls~~e-~~~ 1453 (2014)
.. +. .++.+| +++
T Consensus 96 ~k~~g~-~~~~~e~l~~ 111 (125)
T 1pul_A 96 DRARQS-KKPIQDELDA 111 (125)
T ss_dssp HHHHHH-TCCHHHHHHH
T ss_pred HhccCC-CCCHHHHHHH
Confidence 43 21 256555 554
No 367
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=74.43 E-value=0.46 Score=56.77 Aligned_cols=46 Identities=7% Similarity=-0.092 Sum_probs=41.6
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQKK 1161 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r~ 1161 (2014)
+||.+.+..+++.+|+++.+.|. +.+|+++++||++||.+||.+|+
T Consensus 232 ~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~lL~~dp~~R~ 277 (311)
T 4aw0_A 232 PPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRL 277 (311)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHHHHHHHHSCSSGGGST
T ss_pred CCCCCCCHHHHHHHHHcCCCCCC----cccCHHHHHHHHHHccCCHhHCc
Confidence 69999999999999999988774 46899999999999999999994
No 368
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=73.66 E-value=0.68 Score=55.60 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=52.3
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.+..+.+.+|.++...+....|+.+|.++++++++||..+|.+| +|+|+|.+
T Consensus 201 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 201 NPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp CTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred CCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 5899999999999999999999999999999999999999999999988 48998764
No 369
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=73.43 E-value=0.42 Score=58.59 Aligned_cols=56 Identities=13% Similarity=0.084 Sum_probs=50.8
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+.+|..+.+.|....|..+|.++++||++||..+|.+| +++|+|.
T Consensus 216 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~ 276 (361)
T 2yab_A 216 SPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (361)
T ss_dssp CSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTT
T ss_pred CCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCc
Confidence 5899999999999999999999999999999999999999999999988 4777664
No 370
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=71.82 E-value=0.69 Score=58.36 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=52.1
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.+..+.+..|..+.+.+..+.|+.+|+++++++++||..+|.+| +|+|+|..
T Consensus 211 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~ 272 (444)
T 3soa_A 211 PPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWIS 272 (444)
T ss_dssp CSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred CCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence 5899999999999999999999999999999999999999999999988 48886653
No 371
>1pul_A Hypothetical protein C32E8.3 in chromosome I; alpha helical, northeast structural genomics consortium, PSI, protein structure initiative; NMR {Caenorhabditis elegans} SCOP: a.39.1.11
Probab=71.61 E-value=14 Score=37.29 Aligned_cols=71 Identities=14% Similarity=0.098 Sum_probs=56.8
Q ss_pred CCCcHHHHHHHHHhhcCCCC---cceeHHHHHHHHHH---hc-CCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1208 MKSDAVFVRMMFNIVDKDGD---GRISFQEFLDTVVL---FS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1208 ~~~~~~~l~~lF~~~D~dgd---G~Is~~EF~~~l~~---l~-~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
+......++.+|..|-..|+ ..++-..|..+++. +. ...+..++..+|..+ ..+..+|+|++|..+|..+.
T Consensus 17 ~~~~~~~L~~~F~~Fa~fG~~~~~~M~~k~f~K~~kD~~lidgk~iT~TdvDIiF~Kv-~k~~r~I~f~qF~~aL~~lA 94 (125)
T 1pul_A 17 FNWDDADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKV-TGPKKKATFDETKKVLAFVA 94 (125)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHH-TCSSSCCCHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHhcCCCccccCcHHHHHHHHHHCCCCCCCCCCccccceeehcc-cCCcceecHHHHHHHHHHHH
Confidence 34466677777777655443 67999999999987 43 788999999999999 88889999999999998754
No 372
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=70.69 E-value=0.96 Score=55.30 Aligned_cols=57 Identities=9% Similarity=0.026 Sum_probs=51.8
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.+..+.+..|..+.+.+..+.|..++++++++|++||..+|.+| +|+|+|..
T Consensus 228 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~ 289 (362)
T 2bdw_A 228 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 289 (362)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence 4899999999999999999999999999999999999999999999988 48887764
No 373
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=67.64 E-value=0.9 Score=54.14 Aligned_cols=45 Identities=11% Similarity=0.145 Sum_probs=40.2
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK 1160 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r 1160 (2014)
.||.+.+..+.+.+|+++.+.+. +.+|+++++||++||.++|.+|
T Consensus 224 ~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R 268 (304)
T 3ubd_A 224 LPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRMLFKRNPANR 268 (304)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCcCHHHHHHHHHcCCCCCC----CcCCHHHHHHHHHHcccCHHHC
Confidence 69999999999999999877653 5689999999999999999888
No 374
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=66.76 E-value=1.4 Score=53.55 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=45.5
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+.+|+++.+. +.+..+|.++++||++||.+||.+| +|+|+|.
T Consensus 223 ~PF~~~~~~~~~~~i~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~ 280 (350)
T 4b9d_A 223 HAFEAGSMKNLVLKIISGSFP---PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFI 280 (350)
T ss_dssp CSCCCSSHHHHHHHHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHH
T ss_pred CCCCCcCHHHHHHHHHcCCCC---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHh
Confidence 599999999999999988653 3467899999999999999999998 4888775
No 375
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=64.70 E-value=15 Score=38.35 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=45.9
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHh-cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l-~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.+.++.++..+|.|.||.|+..|-..+++.- ......++ .. .++ ++|..||.+|+......
T Consensus 14 ~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~k-~~---~~h-~~D~~Isv~eLw~~W~~ 75 (150)
T 2l5y_A 14 LEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNK-HS---HLH-REDKHITIEDLWKRWKT 75 (150)
T ss_dssp HHHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHHH-HH---HHT-TTCCCBCHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchhH-Hh---hhc-CCCCeeeHHHHHHHHcc
Confidence 4678999999999999999999999999884 33333322 11 233 35689999999987754
No 376
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=63.49 E-value=1.7e+02 Score=32.14 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=55.4
Q ss_pred cHHHHHHHHHhh-cCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1211 DAVFVRMMFNIV-DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1211 ~~~~l~~lF~~~-D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
+...+.++|..+ |.++...|+.+-....+..++....+-.+-.+--.+....-|.++.+||...+..++
T Consensus 2 ~~~~l~~lF~~Y~d~~~~d~I~~dG~~~~~~DLgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~ 71 (200)
T 3tdu_A 2 SRKKLEQLYNRYKDPQDENKIGIDGIQQFCDDLALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELG 71 (200)
T ss_dssp CHHHHHHHHHHHEETTEEEEECHHHHHHHHHHHTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhcCCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHc
Confidence 345688899887 444457899999999999998887766666666777788899999999999998753
No 377
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=62.04 E-value=2.1 Score=52.23 Aligned_cols=54 Identities=9% Similarity=0.070 Sum_probs=36.1
Q ss_pred EeecChhH----HHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAA----RKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~----~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+..+ ...+..+......+ +.+..+|+++++|+++||..+|.+| +++|+|.
T Consensus 216 ~Pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f 278 (361)
T 3uc3_A 216 YPFEDPEEPRDYRKTIQRILSVKYSI--PDDIRISPECCHLISRIFVADPATRISIPEIKTHSWF 278 (361)
T ss_dssp CSCC----CCCHHHHHHHHHTTCCCC--CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred CCCCCCccHHHHHHHHHHHhcCCCCC--CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence 46665543 44555555544443 3455789999999999999999988 4888775
No 378
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=61.92 E-value=1.1 Score=54.35 Aligned_cols=55 Identities=20% Similarity=0.138 Sum_probs=45.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+..|.++ ....-..|..+|+++++||++||.+||.+| +|+|+|.
T Consensus 268 ~PF~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~ 327 (346)
T 4fih_A 268 PPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327 (346)
T ss_dssp CTTTTSCHHHHHHHHHHS-SCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred CCCCCcCHHHHHHHHHcC-CCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence 589999988888888765 333445688999999999999999999998 4788665
No 379
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=61.30 E-value=12 Score=35.58 Aligned_cols=54 Identities=17% Similarity=0.298 Sum_probs=37.7
Q ss_pred hhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCC--HHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1416 MCDNDRNGVIDKGELAEMLRSLVEMARTTSLT--DSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1416 ~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls--~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
.=|.|+||.|+..++..+.+-+... . .+. ++. +..+|.|+||.|+-.++..+-+
T Consensus 22 ~GDvNgDG~Vn~~D~~llk~yllg~--~-~~~~~~~~--------~~aADvNgDG~In~~D~~~lkk 77 (88)
T 4fl4_A 22 MGDVNDDGKVNSTDLTLLKRYVLKA--V-STLPSSKA--------EKNADVNRDGRVNSSDVTILSR 77 (88)
T ss_dssp TTCTTCSSCCSHHHHHHHHHHHHTS--S-CCCSSHHH--------HHHHCTTCSSCCSHHHHHHHHH
T ss_pred cccCCCCCcCCHHHHHHHHHHHcCC--C-CCCchhhh--------hhhccccCCCCcCHHHHHHHHH
Confidence 4589999999999988877655421 1 222 222 3459999999999999876543
No 380
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=60.18 E-value=1.2e+02 Score=33.45 Aligned_cols=108 Identities=11% Similarity=0.182 Sum_probs=55.7
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH---HHHhh
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS---LVEMA 1441 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~---l~~~~ 1441 (2014)
||..+.+..+--+--.+....-|.++.+||+..+..+.. .+-++++.....+...-+ +.+.|+.+.+- ++...
T Consensus 36 Lgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~~-dsi~~lk~~l~~l~~~l~---d~~~Fk~~Y~ftF~~~re~ 111 (199)
T 3kev_A 36 IQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQV-DSLEKLKRKLSSLRKEIE---DPSKFRAFYQFVFQYSKEP 111 (199)
T ss_dssp TTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTTC-CSHHHHHHHHHHHHHHTT---SHHHHHHHHHHHHHHHSCT
T ss_pred cCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHcCc
Confidence 455554444444444555566788888888888877643 344445555544433322 23345444442 22212
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+.-.|+-+.+-++.+.+|.. ..=-++.|++++..+
T Consensus 112 gqk~L~~e~Ai~~W~lll~~------~~~~l~~W~~FL~~~ 146 (199)
T 3kev_A 112 SQRSLPAETAMALWDVLLRG------RFSLLDSWLEFLKNN 146 (199)
T ss_dssp TCSSBCHHHHHHHHHHHHTT------TCTTHHHHHHHGGGC
T ss_pred CcCCCCHHHHHHHHHHHhCC------ccHHHHHHHHHHHhc
Confidence 22256666666666666521 112345566666544
No 381
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=59.44 E-value=2.7 Score=51.50 Aligned_cols=57 Identities=11% Similarity=0.090 Sum_probs=50.8
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.++.+.+.+|+.....+....|..+++++++||++||..++.+| +|+|+|..
T Consensus 286 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 286 SPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp CTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred CCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 3888888899999999999988888999999999999999999999988 48887753
No 382
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=56.91 E-value=2.1 Score=51.76 Aligned_cols=56 Identities=13% Similarity=0.059 Sum_probs=48.5
Q ss_pred eecC---hhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1113 EFDS---LAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1113 PF~~---~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
||.+ .+..+++..|..+.+.+....|..+|.+++++|++||..+|.+| +++|+|..
T Consensus 219 Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~ 282 (342)
T 2qr7_A 219 PFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282 (342)
T ss_dssp SSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHH
T ss_pred CCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeec
Confidence 5654 35678899999999999999999999999999999999999988 48887764
No 383
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=53.31 E-value=11 Score=39.38 Aligned_cols=63 Identities=17% Similarity=0.232 Sum_probs=47.4
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHH-hcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL-FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~-l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
.+.+.++.++..+|.|.||.|+..|-..+++. +.......+ ...| .. +|..||.+||......
T Consensus 12 ~~~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~~-~~~f---h~-~D~~Isv~eLw~~W~~ 75 (150)
T 2k60_A 12 LSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVK-HSTF---HG-EDKLISVEDLWKAWKS 75 (150)
T ss_dssp CHHHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHHH-HHHH---TS-SSCCEEHHHHHHHHHH
T ss_pred hhhHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchhh-hhcc---cC-CCCeeeHHHHHHHhcc
Confidence 35677999999999999999999999998887 333333332 3333 33 6789999999988764
No 384
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=52.54 E-value=4.2 Score=47.36 Aligned_cols=58 Identities=12% Similarity=-0.002 Sum_probs=50.5
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFREA 1169 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~~ 1169 (2014)
.||.+.+..+....+.++...+..+.|..++.+.++++++||..+|.+| +++|+|.+.
T Consensus 220 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~ 282 (287)
T 2wei_A 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQK 282 (287)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhc
Confidence 4788888888899999998888888899999999999999999999988 488877653
No 385
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=52.08 E-value=3.8 Score=49.11 Aligned_cols=57 Identities=11% Similarity=0.145 Sum_probs=51.6
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.+..+...+++.+...+..+.+..++++.++++++||..++.+| +++|+|.+
T Consensus 274 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~ 335 (345)
T 3hko_A 274 VPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335 (345)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHH
T ss_pred CCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhc
Confidence 4888888899999999999999999999999999999999999999988 48887764
No 386
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=52.01 E-value=2 Score=53.47 Aligned_cols=55 Identities=20% Similarity=0.138 Sum_probs=44.9
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+..|.++ ....-..|..+|+++++||++||.+|+.+| +|+|+|.
T Consensus 345 ~PF~~~~~~~~~~~i~~~-~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~ 404 (423)
T 4fie_A 345 PPYFNEPPLKAMKMIRDN-LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404 (423)
T ss_dssp CTTTTSCHHHHHHHHHHS-CCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGG
T ss_pred CCCCCcCHHHHHHHHHcC-CCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHh
Confidence 589999988888888765 333445678999999999999999999998 4788665
No 387
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=51.25 E-value=2.2 Score=52.89 Aligned_cols=57 Identities=12% Similarity=-0.034 Sum_probs=44.8
Q ss_pred EeecChhHHHHHHHHHhhcccccccc---------------------------cccccccHHHHHHhhcCHHHHHH----
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKH---------------------------LIIVQSPRELMLAKAETRERRQK---- 1160 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~---------------------------~~~vs~~~kdli~~~L~~~~~~r---- 1160 (2014)
.||.++++.+.+..|++......... ++.+|++++|||++||..||.+|
T Consensus 261 ~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~ 340 (398)
T 4b99_A 261 QLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAA 340 (398)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHH
Confidence 68999999999998887655444332 23568999999999999999998
Q ss_pred -HHHHHHHH
Q psy5584 1161 -KLEHFFRE 1168 (2014)
Q Consensus 1161 -~L~h~~~~ 1168 (2014)
+|+|+|.+
T Consensus 341 e~L~Hp~f~ 349 (398)
T 4b99_A 341 AALRHPFLA 349 (398)
T ss_dssp HHTTSGGGT
T ss_pred HHhcCHhhC
Confidence 48887753
No 388
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE calcium entry, signaling protein; NMR {Homo sapiens}
Probab=50.05 E-value=43 Score=34.97 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=51.7
Q ss_pred hHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHH
Q psy5584 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS 1449 (2014)
Q Consensus 1370 s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~ 1449 (2014)
+.+.+..++..+|.|.||.|+..|--.++...........-.. .++ .+|..||.+||-...+.-.. . ..|.+
T Consensus 13 ~~eAi~~~H~~lDdD~dG~Id~~Es~~Flre~~~~~d~~~k~~---~~h-~~D~~Isv~eLw~~W~~s~V-~---nWTve 84 (150)
T 2l5y_A 13 SLEALQTIHKQMDDDKDGGIEVEESDEFIREDMKYKDATNKHS---HLH-REDKHITIEDLWKRWKTSEV-H---NWTLE 84 (150)
T ss_dssp HHHHHHHHHHHHSSSCSSCBCHHHHHHHHHHHTTTTCSHHHHH---HHT-TTCCCBCHHHHHHHHHTSHH-H---HCCHH
T ss_pred hHHHHHHHHHHcCCCCCCCCcHHHHHHHHHHHhcccCchhHHh---hhc-CCCCeeeHHHHHHHHccCcc-h---hCCHH
Confidence 4566889999999999999999999999887644222222122 233 34689999999987763221 0 46666
Q ss_pred HHHH
Q psy5584 1450 QVTE 1453 (2014)
Q Consensus 1450 e~~~ 1453 (2014)
++.+
T Consensus 85 dV~~ 88 (150)
T 2l5y_A 85 DTLQ 88 (150)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 389
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=49.50 E-value=12 Score=35.18 Aligned_cols=54 Identities=15% Similarity=0.319 Sum_probs=36.8
Q ss_pred hcCCCCCeeeHHHHHHHHHHHHHhhcCCCC-CHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSL-TDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1417 ~D~DgdG~Is~eEf~~~L~~l~~~~~~~~l-s~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
=|.|+||.|+..++..+.+.+..... .+ ++.. +..+|.|+||.|+-.++..+-+
T Consensus 8 GDvN~DG~Vn~~D~~llk~yllg~~~--~~~~~~~--------~~~ADvngDG~In~~D~~~lk~ 62 (82)
T 4dh2_B 8 GDVNADGVVNISDYVLMKRYILRIIA--DFPADDD--------MWVGDVNGDNVINDIDCNYLKR 62 (82)
T ss_dssp TCTTCSSSCSHHHHHHHHHHHTTSSS--SCSSSCH--------HHHHCSSSSSCCSHHHHHHHHH
T ss_pred eccCCCCcCCHHHHHHHHHHHcCCCc--cCccccc--------hhheeccCCCcCCHHHHHHHHH
Confidence 38899999999999887775432100 11 1111 2459999999999999876544
No 390
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=49.31 E-value=17 Score=34.48 Aligned_cols=56 Identities=13% Similarity=0.152 Sum_probs=36.6
Q ss_pred HccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1381 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1381 ~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
=|.|+||.|+-.++.-+..-+........-..-....|.|+||.|+..++..+-+-
T Consensus 23 GDvNgDG~Vn~~D~~llk~yllg~~~~~~~~~~~~aADvNgDG~In~~D~~~lkky 78 (88)
T 4fl4_A 23 GDVNDDGKVNSTDLTLLKRYVLKAVSTLPSSKAEKNADVNRDGRVNSSDVTILSRY 78 (88)
T ss_dssp TCTTCSSCCSHHHHHHHHHHHHTSSCCCSSHHHHHHHCTTCSSCCSHHHHHHHHHH
T ss_pred ccCCCCCcCCHHHHHHHHHHHcCCCCCCchhhhhhhccccCCCCcCHHHHHHHHHH
Confidence 37789999999988766555443221100012245789999999999998765543
No 391
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=48.32 E-value=27 Score=37.72 Aligned_cols=69 Identities=17% Similarity=0.242 Sum_probs=50.3
Q ss_pred HHHHHHHhhhcCCCC-----CeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHh
Q psy5584 1408 DKLRIIFDMCDNDRN-----GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRD 1481 (2014)
Q Consensus 1408 e~l~~~F~~~D~Dgd-----G~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~ 1481 (2014)
..|+.+|..|=.-|+ ..++-..|..+++..+.+.+. .++..++ +.+|..+-..+..+|+|++|+.+|..
T Consensus 8 ~~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk-~~T~tdv----DIiF~KvK~k~~rkI~feqF~~aL~~ 81 (184)
T 2jrf_A 8 AGLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGK-SVTGTDV----DIVFSKVKGKSARVINYEEFKKALEE 81 (184)
T ss_dssp SHHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSS-SSCHHHH----HHHHHHHCCSCCSEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCC-CCChhhc----chhhheeccCcceeecHHHHHHHHHH
Confidence 346666766655433 368999999999987654334 6777764 44888887777788999999998865
No 392
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=48.28 E-value=3.2 Score=51.18 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=49.5
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+.++......+....|..++.+++++|++||..++.+| +++|+|.
T Consensus 248 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~ 308 (387)
T 1kob_A 248 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308 (387)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence 5888888889999999999999989999999999999999999999988 3666554
No 393
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=47.93 E-value=3.3e+02 Score=30.33 Aligned_cols=188 Identities=10% Similarity=0.049 Sum_probs=104.4
Q ss_pred HHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1291 (2014)
Q Consensus 1212 ~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~~e 1291 (2014)
...+.++|..+-..+...|..+-+..++..++....+-.+-.+--.+....-|.++.+||...+..++ .-+-.+
T Consensus 5 ~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~------~dsi~~ 78 (221)
T 4gba_A 5 LQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAIS------ADSIDG 78 (221)
T ss_dssp -CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHT------CSSHHH
T ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhC------cCCHHH
Confidence 34578889888544556899999999999998877666666666667778889999999999998754 223333
Q ss_pred HHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHH----HhCC
Q psy5584 1292 VTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS----ALGM 1367 (2014)
Q Consensus 1292 ~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~----~Lg~ 1367 (2014)
+...+..+ ..+......++.+++-.|.......++.+ .|+.+--.. .++.
T Consensus 79 lk~~l~~L------------~~~l~d~~~Fk~~Y~ftF~~~~~~e~gqk--------------~L~le~Ai~~W~Lll~~ 132 (221)
T 4gba_A 79 ICARFPSL------------LTEAKQEDKFKDLYRFTFQFGLDSEEGQR--------------SLHREIAIALWKLVFTQ 132 (221)
T ss_dssp HHHHHHHH------------HHHTTSHHHHHHHHHHHHHHHSCTTTTCS--------------SEEHHHHHHHHHHHTTT
T ss_pred HHHHHHHH------------HHHccCHHHHHHHHHHHHHHHhcCCcccc--------------CCCHHHHHHHHHHHcCC
Confidence 33333221 11112234566777766665432112221 222222211 1222
Q ss_pred CChHHHHHHHHHHHccC--CCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHH
Q psy5584 1368 KSDAVFVRMMFNIVDKD--GDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1438 (2014)
Q Consensus 1368 ~~s~~~l~~lf~~~D~D--gdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~ 1438 (2014)
. ....++..++-+... +...|+.+-...++.-...- . .-+..||.++-=-.-.+||.+.++.-.
T Consensus 133 ~-~~~~l~~W~~FL~~~~~~~k~IskDtW~~~l~F~~~i-~-----~dls~YDe~gAWP~liDeFVEw~ke~~ 198 (221)
T 4gba_A 133 N-NPPVLDQWLNFLTENPSGIKGISRDTWNMFLNFTQVI-G-----PDLSNYSEDEAWPSLFDTFVEWEMERR 198 (221)
T ss_dssp C-CCTTHHHHHHHHHHCTTCCCEECHHHHHHHHHHHHHS-C-----SSCTTCCTTSCCCHHHHHHHHHHHHHH
T ss_pred C-CcHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHh-c-----ccccCCCCCCCchHHHHHHHHHHHHHh
Confidence 0 111233333333322 23456666554443322110 0 115567776666677899999888643
No 394
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=47.92 E-value=3.8 Score=47.51 Aligned_cols=57 Identities=9% Similarity=0.026 Sum_probs=51.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.+..+....+..+...+..+.|..++++.++++++||..+|.+| +++|+|..
T Consensus 205 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~ 266 (284)
T 3kk8_A 205 PPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWIC 266 (284)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHH
T ss_pred CCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcccc
Confidence 4888888899999999999999999999999999999999999999988 47887763
No 395
>3tdu_A DCN1-like protein 1; E2:E3, ligase-protein binding complex; 1.50A {Homo sapiens} PDB: 3tdz_A 4gao_A*
Probab=47.76 E-value=1e+02 Score=33.81 Aligned_cols=108 Identities=11% Similarity=0.166 Sum_probs=54.8
Q ss_pred hCCCChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH---HHHhh
Q psy5584 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS---LVEMA 1441 (2014)
Q Consensus 1365 Lg~~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~---l~~~~ 1441 (2014)
||..+.+..+--+--.+....-|.|+.+||+..+..+.. .+-++++.....+..+=. +.+.|+.+.+- ++...
T Consensus 34 Lgv~ped~~~Lvlaw~l~a~~~g~ftr~ef~~G~~~l~~-dsi~~lk~~l~~l~~~l~---d~~~Fk~~Y~ftF~~~r~~ 109 (200)
T 3tdu_A 34 LALDPASISVLIIAWKFRAATQCEFSKQEFMDGMTELGC-DSIEKLKAQIPKMEQELK---EPGRFKDFYQFTFNFAKNP 109 (200)
T ss_dssp HTCCTTSHHHHHHHHHTTCSSTTCEEHHHHHHHHHHHTC-SSHHHHHHTHHHHHHHTT---SHHHHHHHHHHHHHHHSCT
T ss_pred cCCChhhHHHHHHHHHcCCCccCccCHHHHHHHHHHHcc-ccHHHHHHHHHHHHHHcc---CHHHHHHHHHHHHHHHcCc
Confidence 566655555555555555666788888888888887643 333445554444333222 23445544442 22111
Q ss_pred cCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1442 RTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1442 ~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
+.-.|+-+.+-++.+.+|.. . .=-++.|++++..+
T Consensus 110 gqk~L~~e~Ai~~W~lll~~----~--~~~l~~W~~FL~~~ 144 (200)
T 3tdu_A 110 GQKGLDLEMAIAYWNLVLNG----R--FKFLDLWNKFLLEH 144 (200)
T ss_dssp TCSSEEHHHHHHHHHHHSTT----S--CTTHHHHHHHHHHT
T ss_pred CcCcCCHHHHHHHHHHHcCC----C--chHHHHHHHHHHhc
Confidence 21145555555555544421 1 11245666666543
No 396
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=46.83 E-value=3.1 Score=49.85 Aligned_cols=56 Identities=7% Similarity=0.048 Sum_probs=49.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+..+......+....|..++.++++++++||..+|.+| +|+|+|.
T Consensus 215 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 275 (326)
T 2y0a_A 215 SPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275 (326)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred CCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCc
Confidence 4888888888999999988888888889999999999999999999988 4677654
No 397
>3bq3_A Defective in cullin neddylation protein 1; ubiquitin, ubiquitination,SCF,cullin, E3 E2, cell cycle, protein degradation, ligase; 1.90A {Saccharomyces cerevisiae} PDB: 2is9_A* 3o2p_A 3o6b_A 3tdi_B 2l4e_A 2l4f_A
Probab=46.49 E-value=3.9e+02 Score=30.72 Aligned_cols=188 Identities=12% Similarity=0.109 Sum_probs=109.4
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCC-CcccHHHHHHHHHHHHHhhcCCCCC
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRN-GVIDKGELAEMLRSLVEMARTTSLT 1288 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~d-G~Is~eEF~~~l~~~~~~~~~~~~s 1288 (2014)
.+...+..+|..+- .++.|..+-+..++..++....+-.+-.+--.+..-.= |.++.+||...+..++ .-+
T Consensus 71 ~~~~~l~~lF~~Y~--~~d~I~~dG~~~~~~DLgv~ped~~~Lvla~~l~a~~~~g~ftr~ef~~G~~~l~------~ds 142 (270)
T 3bq3_A 71 VYPKELTQVFEHYI--NNNLFDIDSLVKFIEELGYNLEDLATLCLAHLLGYKKLEEPLKREDFLSTWFMQG------CST 142 (270)
T ss_dssp SSCHHHHHHHHHHC--BTTBCCHHHHHHHHHHHTCCTTCHHHHHHHHHTTCSCTTSCCCHHHHHHHHHHTT------CCS
T ss_pred ccHHHHHHHHHHhc--CCCccCHhhHHHHHHHcCCChhhHHHHHHHHHcCCCccCceeeHHHHHHHHHHhC------CCC
Confidence 45567888999885 56799999999999999877765555555555566666 9999999999998753 233
Q ss_pred HHHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCCCCccccCCCcccccccccccHHHHHH----H
Q psy5584 1289 DSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFAS----A 1364 (2014)
Q Consensus 1289 ~~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~~~~~~~~~~~d~d~~G~~~~~g~ls~~Ef~~----~ 1364 (2014)
-+++...+..+. .. .......++.+++-.|.... .++.+ .|+.+--.. .
T Consensus 143 i~~lk~~l~~l~-------~~----~~~d~~~Fk~~Y~f~F~~~r--~~gqk--------------~l~~d~Ai~~W~ll 195 (270)
T 3bq3_A 143 ISDMQECIKTLD-------VK----LHEDLQYFTQIYNYAFNLIL--DPNRK--------------DIDTDEGIQYWKLF 195 (270)
T ss_dssp HHHHHHHHHHHH-------HH----HHHCHHHHHHHHHHHHHHHC--CTTCS--------------EEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH-------HH----HccCHHHHHHHHHHHHHHhc--CcCcC--------------cCcHHHHHHHHHHH
Confidence 333333332211 00 11223456777776666543 22222 222222222 2
Q ss_pred hCCCC----hHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1365 LGMKS----DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1365 Lg~~~----s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
++.+. +...++..++-+...+...|+.+.+..++.-...-... ..-+.-||.++-=-.-.+||.+.++
T Consensus 196 l~~~~p~~~~~~~l~~W~~FL~~~~~k~IskDtW~~~l~F~~~~~~~---~~dls~YDe~~AWP~liDeFVe~~~ 267 (270)
T 3bq3_A 196 FQPEYPVRMEPDLLEAWFRFLRDEGKTTISKDTWRMLLLFFKRYPTI---QKIISDYDETAAWPFIIDEFYECLQ 267 (270)
T ss_dssp TSTTSSCCCCHHHHHHHHHHHHHHTCCEEEHHHHHHHHHHHHHCCSH---HHHHHHCCTTSSCCHHHHHHHHHHH
T ss_pred cCCcccccccchHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHhccC---CCccccCCccCccHHHHHHHHHHHh
Confidence 23221 12345555555544556678877766555433221101 1235778887776777888887765
No 398
>3kev_A Galieria sulfuraria DCUN1 domain-containing prote; cullin, neddylation, DCN-1, center for eukaryotic structural genomics, PSI; HET: CSO MSE; 1.30A {Galdieria sulphuraria}
Probab=46.02 E-value=3.3e+02 Score=29.80 Aligned_cols=105 Identities=9% Similarity=0.064 Sum_probs=71.0
Q ss_pred CcHHHHHHHHHhhcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHhhcCCCCCH
Q psy5584 1210 SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289 (2014)
Q Consensus 1210 ~~~~~l~~lF~~~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~~~~~~~~~~~s~ 1289 (2014)
.+...+.++|..+-...+..|+.+-....+..++....+-.+-.+--.+....-|.++.+||...+..++ .-+-
T Consensus 4 ~~~~~l~~lF~~Y~d~~~~~I~~dG~~~~~~DLgv~ped~~~LvLaw~l~a~~~g~ftr~ef~~G~~~l~------~dsi 77 (199)
T 3kev_A 4 ADKKAILELFQTYKEPLGNYIGAEGLQRLFEDIQVDPSDVVTLVLAWKLKASSTCEFSEKEFVEGLANLQ------VDSL 77 (199)
T ss_dssp CCHHHHHHHHHHHCCTTSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHTT------CCSH
T ss_pred cCHHHHHHHHHHhcCCCcCccCHHHHHHHHHHcCCChhhHHHHHHHHHcCCCccCcccHHHHHHHHHHhC------CCCH
Confidence 3566788899887433334999999999999998877766666666667888899999999999998743 3344
Q ss_pred HHHHHHHHhhhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5584 1290 SQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALT 1332 (2014)
Q Consensus 1290 ~e~~~~i~~~~~~~~~~~~~~~~~~e~~~~~~e~~~~~~f~~~ 1332 (2014)
+++...+..+.+ +......++.+++-+|...
T Consensus 78 ~~lk~~l~~l~~------------~l~d~~~Fk~~Y~ftF~~~ 108 (199)
T 3kev_A 78 EKLKRKLSSLRK------------EIEDPSKFRAFYQFVFQYS 108 (199)
T ss_dssp HHHHHHHHHHHH------------HTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH------------HccCHHHHHHHHHHHHHHH
Confidence 444444333111 1122345677777766654
No 399
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=45.38 E-value=29 Score=36.40 Aligned_cols=69 Identities=16% Similarity=0.254 Sum_probs=48.7
Q ss_pred HHHHHHhhhcCCCC-----CeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhC
Q psy5584 1409 KLRIIFDMCDNDRN-----GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482 (2014)
Q Consensus 1409 ~l~~~F~~~D~Dgd-----G~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~ 1482 (2014)
.|+.+|..|=.-|+ ..++-..|..+++..+.+.+. .++..++ +.+|..+-..+..+|+|++|+..|...
T Consensus 16 ~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk-~~T~tdv----DiiF~KvK~k~~rkI~f~qF~~aL~~l 89 (151)
T 1wlm_A 16 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGK-AVTGTDV----DIVFSKVKAKSARVINYEEFKKALEEL 89 (151)
T ss_dssp SHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSS-SSCHHHH----HHHHHHHSCSSCSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCC-CCChhhc----ceehheeccCccceecHHHHHHHHHHH
Confidence 35555555544333 358888999999987654334 6777764 447888876677899999999998764
No 400
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=45.09 E-value=4.6 Score=47.51 Aligned_cols=55 Identities=13% Similarity=0.161 Sum_probs=48.9
Q ss_pred eecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1113 EFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1113 PF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
||.+.+..+.+..+.++...+..+.|..++.+.++++++||..+|.+| +++|+|.
T Consensus 206 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 265 (304)
T 2jam_A 206 PFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265 (304)
T ss_dssp TTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHH
T ss_pred CCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence 788888888999999999999888899999999999999999999988 4788775
No 401
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=44.67 E-value=4.2 Score=49.21 Aligned_cols=56 Identities=11% Similarity=0.181 Sum_probs=47.3
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
.||.+.. .+.+..+.++.+.+....|..+|.++++++++||..+|.+| +++|+|.+
T Consensus 231 ~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~ 291 (351)
T 3c0i_A 231 LPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLK 291 (351)
T ss_dssp CSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred CCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhc
Confidence 4777754 46788888888888888899999999999999999999988 48887764
No 402
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=44.59 E-value=3.4 Score=47.83 Aligned_cols=56 Identities=20% Similarity=0.270 Sum_probs=49.8
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.++.+....+.++...+....|..++++.++++++||..+|.+| +++|+|.
T Consensus 205 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 205 PPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265 (277)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 5788888889999999999999999999999999999999999999988 4788664
No 403
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain, EF-SAM, STIM1, store operated calcium entry regulator, SOCE; NMR {Homo sapiens}
Probab=44.30 E-value=23 Score=36.96 Aligned_cols=78 Identities=18% Similarity=0.159 Sum_probs=52.5
Q ss_pred CChHHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCC
Q psy5584 1368 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT 1447 (2014)
Q Consensus 1368 ~~s~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls 1447 (2014)
.++-+.+..++..+|.|.||.|+..|--.++..-........-...| +. +|..||.+||-...+.-.. . ..|
T Consensus 11 ~~~~eAi~~lH~~lDdD~dG~Id~~Es~~flredl~~~d~~~~~~~f---h~-~D~~Isv~eLw~~W~~s~V-~---nWT 82 (150)
T 2k60_A 11 KLSFEAVRNIHKLMDDDANGDVDVEESDEFLREDLNYHDPTVKHSTF---HG-EDKLISVEDLWKAWKSSEV-Y---NWT 82 (150)
T ss_dssp CCHHHHHHHHHHTTCTTCSSEECTTTTTTHHHHHTTSSCTHHHHHHH---TS-SSCCEEHHHHHHHHHHSHH-H---HCC
T ss_pred hhhhHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhccccchhhhhcc---cC-CCCeeeHHHHHHHhccCcc-c---cCC
Confidence 34567799999999999999999998777776643332222223344 33 5779999999987764221 1 456
Q ss_pred HHHHHH
Q psy5584 1448 DSQVTE 1453 (2014)
Q Consensus 1448 ~~e~~~ 1453 (2014)
.+++.+
T Consensus 83 vedV~~ 88 (150)
T 2k60_A 83 VDEVVQ 88 (150)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666544
No 404
>4dh2_B Dockerin type 1; cellulosome, cohesin, type I cohesin-dockerin, Pro protein interaction, cell adhesion; 1.75A {Clostridium thermocellum}
Probab=43.57 E-value=10 Score=35.62 Aligned_cols=56 Identities=14% Similarity=0.084 Sum_probs=38.4
Q ss_pred hcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1222 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1222 ~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
=|.|+||.|+..++..+.+.+....+.-....-....|.|+||.|+..++..+-+-
T Consensus 8 GDvN~DG~Vn~~D~~llk~yllg~~~~~~~~~~~~~ADvngDG~In~~D~~~lk~y 63 (82)
T 4dh2_B 8 GDVNADGVVNISDYVLMKRYILRIIADFPADDDMWVGDVNGDNVINDIDCNYLKRY 63 (82)
T ss_dssp TCTTCSSSCSHHHHHHHHHHHTTSSSSCSSSCHHHHHCSSSSSCCSHHHHHHHHHH
T ss_pred eccCCCCcCCHHHHHHHHHHHcCCCccCccccchhheeccCCCcCCHHHHHHHHHH
Confidence 38899999999999887766543211000011245789999999999998765443
No 405
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=41.50 E-value=4.1 Score=49.66 Aligned_cols=55 Identities=15% Similarity=0.031 Sum_probs=48.2
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFF 1166 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~ 1166 (2014)
.||.+.+..+....+..+...+..+.|..++.+.++++++||..+|.+| +++|+|
T Consensus 303 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~ 362 (365)
T 2y7j_A 303 PPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPF 362 (365)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGG
T ss_pred CCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 4788888888889999999999889999999999999999999999988 466655
No 406
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=40.80 E-value=46 Score=29.35 Aligned_cols=53 Identities=26% Similarity=0.396 Sum_probs=36.9
Q ss_pred hcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHH
Q psy5584 1417 CDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480 (2014)
Q Consensus 1417 ~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~ 1480 (2014)
=|.|+||.++..++..+-+.+.. ...+++.. +..+|.|+||.|+-.+|..+-+
T Consensus 5 GDvN~DG~vn~~D~~~l~~yllg---~~~~~~~~--------~~~aDvn~DG~in~~D~~~l~~ 57 (63)
T 2ccl_B 5 GDVNGDGTINSTDLTMLKRSVLR---AITLTDDA--------KARADVDKNGSINAADVLLLSR 57 (63)
T ss_dssp TCTTCSSSCCHHHHHHHHHHHTT---SSCCCHHH--------HHHHCTTCSSCCSHHHHHHHHH
T ss_pred cccCCCCcCCHHHHHHHHHHHcC---CCccccch--------hhhhccCCCCCccHHHHHHHHH
Confidence 48899999999998776554321 11344433 2459999999999999876543
No 407
>2jrf_A Tubulin polymerization-promoting protein family member 3; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=39.76 E-value=1.6e+02 Score=31.82 Aligned_cols=68 Identities=16% Similarity=0.202 Sum_probs=53.6
Q ss_pred HHHHHHHHHccCCC-----CceeHHHHHHHHHHHh----cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHh
Q psy5584 1373 FVRMMFNIVDKDGD-----GRISFQEFLDTVVLFS----RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1440 (2014)
Q Consensus 1373 ~l~~lf~~~D~Dgd-----G~Isf~EFl~~l~~~~----~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~ 1440 (2014)
.++.+|..|-.-++ ..|+-..|..++..-. ...+...+..+|..+-..+...|+.++|..+|..+...
T Consensus 9 ~L~~~F~~F~~fG~~~~~~~eMd~~~F~KlcKD~~liDgk~~T~tdvDIiF~KvK~k~~rkI~feqF~~aL~~lA~k 85 (184)
T 2jrf_A 9 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVINYEEFKKALEELATK 85 (184)
T ss_dssp HHHHHHHHHHSSSCTTSTTSEEEHHHHHHHHHHTTCCCSSSSCHHHHHHHHHHHCCSCCSEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCccccCcHHHHHHHHHHcCCccCCCCChhhcchhhheeccCcceeecHHHHHHHHHHHHHH
Confidence 47888888877444 3699999999988731 44667789999999876778899999999999877653
No 408
>1wlm_A Protein CGI-38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: a.39.1.11
Probab=38.35 E-value=2.2e+02 Score=29.83 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=52.8
Q ss_pred HHHHHHHHHccCCC-----CceeHHHHHHHHHHHh----cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHH
Q psy5584 1373 FVRMMFNIVDKDGD-----GRISFQEFLDTVVLFS----RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439 (2014)
Q Consensus 1373 ~l~~lf~~~D~Dgd-----G~Isf~EFl~~l~~~~----~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~ 1439 (2014)
.++.+|..|-.-++ ..|+-..|..++..-. +..+...+..+|..+-..+...|+.++|..+|..+..
T Consensus 16 ~L~~~F~~F~~fG~~~~~~~~M~~~~f~Kl~kD~~lidgk~~T~tdvDiiF~KvK~k~~rkI~f~qF~~aL~~lA~ 91 (151)
T 1wlm_A 16 GLEESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELAT 91 (151)
T ss_dssp SHHHHHHHHHTSSCSSCCSSEEEHHHHHHHHHHTSCCCSSSSCHHHHHHHHHHHSCSSCSEEEHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHhcccCCcccccCCHHHHHHHHHHCCCCcCCCCChhhcceehheeccCccceecHHHHHHHHHHHHH
Confidence 47888888877443 3699999999988732 3456678999999987677889999999999987655
No 409
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=38.02 E-value=5 Score=49.83 Aligned_cols=56 Identities=9% Similarity=-0.024 Sum_probs=46.4
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHH--H-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQ--K-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~--r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+.+|+++...+.-+.+..+|.++++||++||+.++.+ | +++|+|.
T Consensus 271 ~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f 333 (410)
T 3v8s_A 271 TPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 333 (410)
T ss_dssp CTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGG
T ss_pred CCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccc
Confidence 589999999999999998776666778889999999999999876654 3 5778664
No 410
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=37.89 E-value=22 Score=36.33 Aligned_cols=29 Identities=7% Similarity=0.271 Sum_probs=24.4
Q ss_pred HHHHcCCCCCCcccHHHHHHHHHhCcccc
Q psy5584 1458 MFQDAGLDSKDFLTYQDFKLMMRDYKGDF 1486 (2014)
Q Consensus 1458 if~~~D~d~dG~Is~eEF~~~l~~~~~~l 1486 (2014)
.+.++|+++.|.|++.++..++...+..+
T Consensus 48 ~W~~fDP~aTg~I~~~~L~~ll~~L~pPL 76 (129)
T 2kav_A 48 VWEKFDPDATQFIEFAKLSDFADALDPPL 76 (129)
T ss_dssp HHHHHCTTCCCEECGGGHHHHHHHSCTTS
T ss_pred HHHhcCCCCceEEeHHHHHHHHHhCCccc
Confidence 67779999999999999999998877644
No 411
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=37.28 E-value=6 Score=48.89 Aligned_cols=47 Identities=11% Similarity=0.013 Sum_probs=41.1
Q ss_pred HHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1122 KFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1122 ~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
....|..+.+.+....|..+|.++++||++||..++.+| +++|+|..
T Consensus 275 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~ 326 (400)
T 1nxk_A 275 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 326 (400)
T ss_dssp HHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 556778888899999999999999999999999999988 58887763
No 412
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=37.08 E-value=9.5 Score=46.13 Aligned_cols=53 Identities=17% Similarity=0.210 Sum_probs=44.5
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
+||.+.+..+...+|..+.+.+. ..+|+++++++++||..+|.+| +++|+|..
T Consensus 208 ~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~Rps~~eil~hp~~~ 265 (347)
T 3zgw_A 208 LPFDDDNVMALYKKIMRGKYDVP----KWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWIM 265 (347)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHcccCHhHCcCHHHHhcCcchh
Confidence 68999999999999999877654 3478999999999999999988 48887763
No 413
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=36.70 E-value=4.6 Score=49.30 Aligned_cols=32 Identities=19% Similarity=0.024 Sum_probs=26.9
Q ss_pred cccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1136 KHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1136 ~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
..|..+|++++|||++||..||.+| .|+|+|.
T Consensus 320 ~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f 356 (361)
T 4f9c_A 320 EGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356 (361)
T ss_dssp --CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred cccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence 4688999999999999999999998 3888764
No 414
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=35.25 E-value=6.8 Score=45.72 Aligned_cols=55 Identities=11% Similarity=-0.022 Sum_probs=47.2
Q ss_pred eecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1113 EFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1113 PF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
||.+.+..+....+..+...+..+.|..++.+.++++++||..++.+| +++|+|.
T Consensus 228 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (298)
T 1phk_A 228 PFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287 (298)
T ss_dssp SSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred CCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHh
Confidence 777777888889999999999889999999999999999999999988 3555543
No 415
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=34.40 E-value=5.6 Score=46.95 Aligned_cols=49 Identities=18% Similarity=0.218 Sum_probs=42.3
Q ss_pred HHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1119 ARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1119 ~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
....+..+.++.+.+....|..++.++++++++||..+|.+| +++|+|.
T Consensus 246 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~ 299 (316)
T 2ac3_A 246 QNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299 (316)
T ss_dssp HHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTC
T ss_pred HHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhh
Confidence 466788888988888888899999999999999999999988 4777664
No 416
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=34.06 E-value=9.9 Score=43.88 Aligned_cols=59 Identities=10% Similarity=0.092 Sum_probs=49.4
Q ss_pred eecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHHHHh
Q psy5584 1113 EFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFREAYA 1171 (2014)
Q Consensus 1113 PF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~~F~ 1171 (2014)
||.+.+..+....+......+....+..++.+.++++++||..+|.+| +++|+|.+...
T Consensus 210 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 210 PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp TTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred CCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 788888888888888888877777788899999999999999999988 48887765443
No 417
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=33.79 E-value=8 Score=46.70 Aligned_cols=55 Identities=11% Similarity=0.033 Sum_probs=44.8
Q ss_pred eecChh-HHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1113 EFDSLA-ARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1113 PF~~~~-~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
||.+.. +...+..+.+....+..+.|..++.++++++++||..+|.+| +|+|+|.
T Consensus 249 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~ 309 (349)
T 2w4o_A 249 PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309 (349)
T ss_dssp TTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred CCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 565554 344778888888888888899999999999999999999988 4777664
No 418
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=33.78 E-value=5.9 Score=47.01 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=47.7
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+.+..+......+....+..++.+.++++++||..+|.+| +++|+|.
T Consensus 216 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~ 276 (321)
T 2a2a_A 216 SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276 (321)
T ss_dssp CSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTT
T ss_pred CCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 4788888888999999988888777788999999999999999999988 4666554
No 419
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=33.78 E-value=39 Score=30.69 Aligned_cols=51 Identities=22% Similarity=0.388 Sum_probs=35.7
Q ss_pred hcCCCCcceeHHHHHHHHHHh--cCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHHH
Q psy5584 1222 VDKDGDGRISFQEFLDTVVLF--SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277 (2014)
Q Consensus 1222 ~D~dgdG~Is~~EF~~~l~~l--~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~~ 1277 (2014)
=|.|+||.++..++..+-..+ ....+ ... ...|.|+||.|+..++..+-+-
T Consensus 7 GDvN~DG~vn~~D~~~l~~yl~~lg~~~--~~~---~~aDvN~DG~in~~D~~~l~~~ 59 (71)
T 2y3n_B 7 GDLNGDGVINMADVMILAQSFGKAIGNP--GVN---EKADLNNDGVINSDDAIILAQY 59 (71)
T ss_dssp TCTTSSSBCSHHHHHHHHHTTTCBC-----------CTTCTTCSSBCSHHHHHHHHHH
T ss_pred CcCCCCCcCCHHHHHHHHHHHHHhCCCc--CCC---ccccccCCCcccHHHHHHHHHH
Confidence 388999999999997765554 22212 122 7889999999999998766543
No 420
>2qjy_A Cytochrome B; cytochrome B, 8 TM helixces cytochrome C1, 1 C-TERM TM helix 1 N-TERM TM helix; HET: BGL HEM SMA LOP UQ2; 2.40A {Rhodobacter sphaeroides} PDB: 2fyn_A* 2qjk_A* 2qjp_A* 1zrt_C* 2yiu_A*
Probab=33.28 E-value=2e+02 Score=35.57 Aligned_cols=60 Identities=15% Similarity=0.241 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccc--hhhHHHHHhccCCCchhhH-HHHHHHHHHHHHHHHHHHH
Q psy5584 1545 FYLFIFYVITIALFVERFIHYSFLA--EHTDLRHIMGQYIPLDSHI-QFHKIAACTALFFSLIHTV 1607 (2014)
Q Consensus 1545 ~~l~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~G~~i~~d~~~-~~Hr~ig~~~~~~~~lH~i 1607 (2014)
+.+++.+-+..++|+ +.+|.... ....+..++- -+++--++ .+|.|-|-++++...+|..
T Consensus 51 l~~~l~iQilTGifL--am~Y~p~~~~Af~Sv~~I~r-dV~~GwliR~~H~~gAs~ffi~iylHi~ 113 (445)
T 2qjy_A 51 LAFCLVLQIVTGIVL--AMHYTPHVDLAFASVEHIMR-NVNGGFMLRYLHANGASLFFIAVYLHIF 113 (445)
T ss_dssp HHHHHHHHHHHHHHH--HTTCCCSTTTHHHHHHHHHH-TSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HeeccCCcHHHHHHHHHHHh-hCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333344455555 34453322 2333444443 34443333 7899999999999999976
No 421
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=33.13 E-value=7.1 Score=46.56 Aligned_cols=56 Identities=9% Similarity=0.098 Sum_probs=49.4
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+..+....+......+....+..++.++++++++||..+|.+| +|+|+|.
T Consensus 231 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~ 291 (327)
T 3lm5_A 231 SPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291 (327)
T ss_dssp CSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGG
T ss_pred CCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhh
Confidence 4888888888999999998999999999999999999999999999988 4677664
No 422
>2ccl_B Endo-1,4-beta-xylanase Y; cell adhesion, cohesin/dockerin complex, cellulosome, cohesi dockerin, scaffolding, cellulose degradation; 2.03A {Clostridium thermocellum} SCOP: a.139.1.1 PDB: 1ohz_B
Probab=33.07 E-value=55 Score=28.84 Aligned_cols=52 Identities=27% Similarity=0.353 Sum_probs=37.0
Q ss_pred hhcCCCCcceeHHHHHHHHHHhcCC--CCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1221 IVDKDGDGRISFQEFLDTVVLFSRG--HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1221 ~~D~dgdG~Is~~EF~~~l~~l~~~--~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
.=|.|+||.++..++..+-..+... .++. -....|.|+||.|+..+|..+-+
T Consensus 4 ~GDvN~DG~vn~~D~~~l~~yllg~~~~~~~----~~~~aDvn~DG~in~~D~~~l~~ 57 (63)
T 2ccl_B 4 LGDVNGDGTINSTDLTMLKRSVLRAITLTDD----AKARADVDKNGSINAADVLLLSR 57 (63)
T ss_dssp TTCTTCSSSCCHHHHHHHHHHHTTSSCCCHH----HHHHHCTTCSSCCSHHHHHHHHH
T ss_pred ecccCCCCcCCHHHHHHHHHHHcCCCccccc----hhhhhccCCCCCccHHHHHHHHH
Confidence 3488999999999997665543222 2222 24678999999999999876543
No 423
>2kav_A Sodium channel protein type 2 subunit alpha; voltage-gated sodium channel, alternative splicing, disease epilepsy, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kbi_A
Probab=30.43 E-value=23 Score=36.09 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=23.1
Q ss_pred HHHHHHHhccCCCCCcccHHHHHHHHHHHH
Q psy5584 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279 (2014)
Q Consensus 1250 el~~lF~~~D~D~dG~Is~eEF~~~l~~~~ 1279 (2014)
++.++|..||.++.|+|++.+|..++..+.
T Consensus 44 ~F~~~W~~fDP~aTg~I~~~~L~~ll~~L~ 73 (129)
T 2kav_A 44 MFYEVWEKFDPDATQFIEFAKLSDFADALD 73 (129)
T ss_dssp HHHHHHHHHCTTCCCEECGGGHHHHHHHSC
T ss_pred HHHHHHHhcCCCCceEEeHHHHHHHHHhCC
Confidence 345678888888888888888888887654
No 424
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=30.28 E-value=3.9 Score=48.86 Aligned_cols=49 Identities=8% Similarity=-0.056 Sum_probs=43.1
Q ss_pred HHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHHH-----HHHHHH
Q psy5584 1119 ARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQKK-----LEHFFR 1167 (2014)
Q Consensus 1119 ~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r~-----L~h~~~ 1167 (2014)
..+.+..+.++.+.+....|..+|+++++++++||..+|.+|. ++|+|.
T Consensus 221 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~ 274 (325)
T 3kn6_A 221 AVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWL 274 (325)
T ss_dssp HHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGG
T ss_pred HHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhh
Confidence 3678889999999999999999999999999999999999993 677665
No 425
>1vf5_A Cytochrome B6; photosynthesis, membrane protein complex, electron transfer complex; HET: HEM TDS PL9 OPC CLA BCR; 3.00A {Mastigocladus laminosus} SCOP: f.21.1.2 PDB: 2d2c_A* 2e74_A* 2e75_A* 2e76_A* 2zt9_A* 1q90_B*
Probab=29.49 E-value=3.6e+02 Score=29.93 Aligned_cols=60 Identities=12% Similarity=0.199 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhcccc--chhhHHHHHhccCCCchhhH-HHHHHHHHHHHHHHHHHHH
Q psy5584 1545 FYLFIFYVITIALFVERFIHYSFL--AEHTDLRHIMGQYIPLDSHI-QFHKIAACTALFFSLIHTV 1607 (2014)
Q Consensus 1545 ~~l~~~~~i~~~l~~~~~~~~~~~--~~~~~~~~~~G~~i~~d~~~-~~Hr~ig~~~~~~~~lH~i 1607 (2014)
+.+.+.+-+..++|+ +.+|... .....+..++ +-+++--++ .+|.|-|-+.++...+|..
T Consensus 40 l~~~l~iqi~TG~~L--am~Y~p~~~~Af~Sv~~I~-~dv~~GwliR~~H~~gAs~ffi~~ylHi~ 102 (215)
T 1vf5_A 40 TLTCFLIQFATGFAM--TFYYKPTVTEAYASVQYIM-NEVSFGWLIRSIHRWSASMMVLMMILHVF 102 (215)
T ss_dssp HHHHHHHHHHHHHHH--TTTCCCSTTTHHHHHHHHH-TTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HhHhcCChhHHHHHHHHHH-hhcccchhhccchHHHHHHHHHHHHHHHH
Confidence 333334444555555 3445332 2223344444 345554443 6799999999999999976
No 426
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=28.78 E-value=61 Score=28.69 Aligned_cols=50 Identities=14% Similarity=0.163 Sum_probs=33.5
Q ss_pred ccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1382 DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1382 D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
|.|+||.|+-.+|.-+-..+........ ...|.|+||.|+..++..+-+.
T Consensus 6 DvN~DG~vn~~D~~~l~~yllg~~~~~~-----~~aDvn~DG~in~~D~~~l~~~ 55 (64)
T 2vn6_B 6 DYNNDGNVDSTDFAGLKKYIMAADHAYV-----KNLDVNLDNEVNAFDLAILKKY 55 (64)
T ss_dssp CTTSSSCCSHHHHHHHHHHHHSTTCCCC-----GGGCTTCSSCCSHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHccCCccch-----hhhcccCCCcccHHHHHHHHHH
Confidence 6788999998888655433322211111 6789999999999988765553
No 427
>2vn6_B Endoglucanase A; cell adhesion, carbohydrate metabolism, polysaccharide degradation, hydrolase, glycosidase, cellulose degradation; 1.49A {Clostridium cellulolyticum} PDB: 2vn5_B
Probab=28.33 E-value=38 Score=30.02 Aligned_cols=50 Identities=14% Similarity=0.154 Sum_probs=34.5
Q ss_pred hcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHHH
Q psy5584 1222 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276 (2014)
Q Consensus 1222 ~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l~ 1276 (2014)
=|.|+||.++..++..+-..+....+... ...|.|+||.|+..+|..+-+
T Consensus 5 GDvN~DG~vn~~D~~~l~~yllg~~~~~~-----~~aDvn~DG~in~~D~~~l~~ 54 (64)
T 2vn6_B 5 GDYNNDGNVDSTDFAGLKKYIMAADHAYV-----KNLDVNLDNEVNAFDLAILKK 54 (64)
T ss_dssp TCTTSSSCCSHHHHHHHHHHHHSTTCCCC-----GGGCTTCSSCCSHHHHHHHHH
T ss_pred ccCCCCCcCCHHHHHHHHHHHccCCccch-----hhhcccCCCcccHHHHHHHHH
Confidence 38899999999998665443221111000 688999999999999876543
No 428
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=27.99 E-value=35 Score=30.47 Aligned_cols=51 Identities=12% Similarity=0.219 Sum_probs=36.9
Q ss_pred hcCCCCcceeHHHHHHHHHHhcCCCCHHHHHHHHHhccCCCCCcccHHHHHHHH
Q psy5584 1222 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275 (2014)
Q Consensus 1222 ~D~dgdG~Is~~EF~~~l~~l~~~~~eeel~~lF~~~D~D~dG~Is~eEF~~~l 1275 (2014)
=|.|+||.|+..++..+-+.+...... . .. ....|.|+||.|+..++..+-
T Consensus 6 GDvN~DG~Vn~~D~~llk~yllg~~~~-~-~~-~~~ADvn~DG~In~~D~~~lk 56 (65)
T 3ul4_B 6 GDLNRNGIVNDEDYILLKNYLLRGNKL-V-ID-LNVADVNKDGKVNSTDCLFLK 56 (65)
T ss_dssp TCTTCSSCCSHHHHHHHHHHHTTCSSC-C-CC-GGGCCTTCSSCCSHHHHHHHH
T ss_pred ecCCCCCcCCHHHHHHHHHHHCCCCCC-c-hH-HHhccccCCCCCCHHHHHHHH
Confidence 388999999999998776664332110 0 11 578999999999999887653
No 429
>3cx5_C Cytochrome B-C1 complex subunit 8; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Saccharomyces cerevisiae} SCOP: f.32.1.1 f.21.1.2 PDB: 3cxh_C* 1ezv_C* 1kb9_C* 1kyo_C* 1p84_C* 2ibz_C*
Probab=27.05 E-value=3.2e+02 Score=33.08 Aligned_cols=60 Identities=20% Similarity=0.296 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhccccc--hhhHHHHHhccCCCchhhH-HHHHHHHHHHHHHHHHHHH
Q psy5584 1545 FYLFIFYVITIALFVERFIHYSFLA--EHTDLRHIMGQYIPLDSHI-QFHKIAACTALFFSLIHTV 1607 (2014)
Q Consensus 1545 ~~l~~~~~i~~~l~~~~~~~~~~~~--~~~~~~~~~G~~i~~d~~~-~~Hr~ig~~~~~~~~lH~i 1607 (2014)
+.+++.+-+..++++ +.+|.... ....+..++- -+++--++ .+|.|-|-+.++...+|..
T Consensus 36 l~~~l~iqi~TGifL--am~Y~p~~~~Af~Sv~~I~~-dV~~GwliR~~H~~gAs~ffi~iylHi~ 98 (385)
T 3cx5_C 36 LGLCLVIQIVTGIFM--AMHYSSNIELAFSSVEHIMR-DVHNGYILRYLHANGASFFFMVMFMHMA 98 (385)
T ss_dssp HHHHHHHHHHHHHHH--HTTCCCSTTTHHHHHHHHHH-TSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--HeeeeCCchHHHHHHHHHHh-cCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444455555 34453322 2233444443 34443332 7899999999999999976
No 430
>1m0f_B GPB, scaffolding protein B; bacteriophage, cryo electron microscopy, procapsid, morphogenesis, microviridae, assembly; 16.00A {Enterobacteria phage ALPHA3} SCOP: i.6.1.1
Probab=26.80 E-value=49 Score=28.56 Aligned_cols=50 Identities=18% Similarity=0.130 Sum_probs=36.1
Q ss_pred HHHHhhhhhhHHHHHHH-HHHhCCccCCcccccccCcccccccccCHHHHH
Q psy5584 11 LRERRQKKLEHFFREAY-ALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA 60 (2014)
Q Consensus 11 ~~~~~~~~l~~~~~~~~-~~~~~l~~~~~~~~~~y~~~v~ps~~i~~~EF~ 60 (2014)
++.+|||+.++--|+.+ ++.||=.|..+.....|..-......|.+.||-
T Consensus 5 se~eRqk~~eie~~ks~~~R~fG~A~~ddk~a~~ya~FD~nd~rvQ~aEFY 55 (68)
T 1m0f_B 5 TKNQRKKRDEIEAGKSYCSRRFGGATCDDKSAQIYARFDKNDWRIQPAEFY 55 (68)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCCcchhhHHHHhccCcCcceechhHhe
Confidence 56789999999888776 788998888877777774433334555566663
No 431
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=26.61 E-value=10 Score=44.68 Aligned_cols=54 Identities=9% Similarity=0.132 Sum_probs=37.5
Q ss_pred EeecChh-HHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLA-ARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~-~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
.||.+.+ ...++..|.++.. ....+..+|+++++||++||.++|.+| +|+|+|.
T Consensus 227 ~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~ 286 (290)
T 3fpq_A 227 YPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFF 286 (290)
T ss_dssp CTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred CCCCCCCcHHHHHHHHHcCCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence 4786544 4555566665432 223345678999999999999999998 4777664
No 432
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=25.95 E-value=14 Score=44.13 Aligned_cols=46 Identities=7% Similarity=-0.031 Sum_probs=32.6
Q ss_pred HHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHHH
Q psy5584 1123 FMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFRE 1168 (2014)
Q Consensus 1123 ~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~~ 1168 (2014)
...+......+..+.|..++.++++++++||..+|.+| +++|+|..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~ 292 (336)
T 3fhr_A 242 KRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWIN 292 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence 44555666777788889999999999999999999988 58887763
No 433
>3ul4_B Cellulosome enzyme, dockerin type I; cohesin, type I cohesin-dockerin COMP protein-protein interaction, cell adhesion; HET: PEG; 1.95A {Clostridium thermocellum}
Probab=24.13 E-value=67 Score=28.63 Aligned_cols=50 Identities=12% Similarity=0.262 Sum_probs=35.5
Q ss_pred ccCCCCceeHHHHHHHHHHHhcCC-cHHHHHHHHhhhcCCCCCeeeHHHHHHHHH
Q psy5584 1382 DKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435 (2014)
Q Consensus 1382 D~DgdG~Isf~EFl~~l~~~~~~~-~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~ 1435 (2014)
|.|+||.|+-.++.-....+.... ..+ . ....|.|+||.|+..++..+-+
T Consensus 7 DvN~DG~Vn~~D~~llk~yllg~~~~~~---~-~~~ADvn~DG~In~~D~~~lk~ 57 (65)
T 3ul4_B 7 DLNRNGIVNDEDYILLKNYLLRGNKLVI---D-LNVADVNKDGKVNSTDCLFLKK 57 (65)
T ss_dssp CTTCSSCCSHHHHHHHHHHHTTCSSCCC---C-GGGCCTTCSSCCSHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHCCCCCCch---H-HHhccccCCCCCCHHHHHHHHH
Confidence 678999999999876655544321 111 1 5688999999999998876544
No 434
>2y3n_B Cellulosomal family-48 processive glycoside hydro; structrual protein-hydrolase complex, cellulosome; 1.90A {Bacteroides cellulosolvens}
Probab=23.62 E-value=65 Score=29.18 Aligned_cols=51 Identities=20% Similarity=0.325 Sum_probs=32.5
Q ss_pred ccCCCCceeHHHHHHHHHHHh-cCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHH
Q psy5584 1382 DKDGDGRISFQEFLDTVVLFS-RGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436 (2014)
Q Consensus 1382 D~DgdG~Isf~EFl~~l~~~~-~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~ 1436 (2014)
|.|+||.|+-.++.-.-..+. .+.. .... ...|.|+||.|+..++..+-+.
T Consensus 8 DvN~DG~vn~~D~~~l~~yl~~lg~~-~~~~---~~aDvN~DG~in~~D~~~l~~~ 59 (71)
T 2y3n_B 8 DLNGDGVINMADVMILAQSFGKAIGN-PGVN---EKADLNNDGVINSDDAIILAQY 59 (71)
T ss_dssp CTTSSSBCSHHHHHHHHHTTTCBC----------CTTCTTCSSBCSHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHHHHhCCC-cCCC---ccccccCCCcccHHHHHHHHHH
Confidence 668889998888865543331 1111 1111 6789999999999888766554
No 435
>4gba_A DCN1-like protein 3; E3 ligase, ligase-peptide complex; HET: AME; 2.40A {Homo sapiens}
Probab=22.46 E-value=3.8e+02 Score=29.79 Aligned_cols=86 Identities=7% Similarity=0.008 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHccCCCCceeHHHHHHHHHHHhcCCcHHHHHHHHhhhcCCCCCeeeHHHHHHHHHHHHHhhcCCCCCHHH
Q psy5584 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQ 1450 (2014)
Q Consensus 1371 ~~~l~~lf~~~D~DgdG~Isf~EFl~~l~~~~~~~~~e~l~~~F~~~D~DgdG~Is~eEf~~~L~~l~~~~~~~~ls~~e 1450 (2014)
...++++|+.+-..+...|..+-...++..+.-...+-.+-.+--.+....-|.+|++||...+..++. -+-+.
T Consensus 5 ~~~l~~lF~~Y~d~~~d~I~~eGi~~l~~DLgv~ped~~~LvLAw~l~A~~mg~ftr~eF~~G~~~l~~------dsi~~ 78 (221)
T 4gba_A 5 LQRLEELFRRYKDEREDAILEEGMERFCNDLCVDPTEFRVLLLAWKFQAATMCKFTRKEFFDGCKAISA------DSIDG 78 (221)
T ss_dssp -CHHHHHHHTTSCSSSSEECHHHHHHHHHHTTCCTTSHHHHHHHHHTTCCSTTCEEHHHHHHHHHHHTC------SSHHH
T ss_pred HHHHHHHHHHhcCCCCCccCHHHHHHHHHHcCCChhhHHHHHHHHHhCCCccCcCcHHHHHHHHHHhCc------CCHHH
Confidence 345788888886555568999988888888765543333333333345567799999999999998753 34455
Q ss_pred HHHHHHHHHHHc
Q psy5584 1451 VTELIDGMFQDA 1462 (2014)
Q Consensus 1451 ~~~li~~if~~~ 1462 (2014)
+...+..+-+++
T Consensus 79 lk~~l~~L~~~l 90 (221)
T 4gba_A 79 ICARFPSLLTEA 90 (221)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHc
Confidence 556566666666
No 436
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=21.25 E-value=16 Score=42.89 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=41.8
Q ss_pred EeecChhHHHHHHHHHhhccccccccc-----------------------ccccccHHHHHHhhcCHHHHHH-----HHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHL-----------------------IIVQSPRELMLAKAETRERRQK-----KLE 1163 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~-----------------------~~vs~~~kdli~~~L~~~~~~r-----~L~ 1163 (2014)
.||.+.++.+...++.+.........| +.+++++++++++||..+|.+| +|+
T Consensus 217 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 217 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 578888888888888775443333333 3577889999999999999988 477
Q ss_pred HHHH
Q psy5584 1164 HFFR 1167 (2014)
Q Consensus 1164 h~~~ 1167 (2014)
|+|.
T Consensus 297 h~~~ 300 (308)
T 3g33_A 297 HSYL 300 (308)
T ss_dssp STTC
T ss_pred Cccc
Confidence 7654
No 437
>4dck_A Sodium channel protein type 5 subunit alpha; IQ-motif, EF-hand, voltage-gated sodium channel regulation, CTD binds to FGF13 and CAM. CAM binds to Ca2+.; 2.20A {Homo sapiens} PDB: 2kbi_A
Probab=20.55 E-value=74 Score=33.93 Aligned_cols=41 Identities=7% Similarity=0.254 Sum_probs=31.2
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCCCcccHHHHHHHHHhCcccc
Q psy5584 1445 SLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDF 1486 (2014)
Q Consensus 1445 ~ls~~e~~~li~~if~~~D~d~dG~Is~eEF~~~l~~~~~~l 1486 (2014)
.+++++++... .+++++|+++.|.|.|.++..++...+..+
T Consensus 13 ~L~~~dl~~F~-~~W~~fDP~ATgfI~~~~L~~~l~~L~pPL 53 (168)
T 4dck_A 13 PLSEDDFDMFY-EIWEKFDPEATQFIEYSVLSDFADALSEPL 53 (168)
T ss_dssp CBCHHHHHHHH-HHHHHHCTTCCSEEEGGGHHHHHHHSCTTT
T ss_pred CCCHHHHHHHH-HHHHHhCCCCcceeeHHHHHHHHHhcCCCC
Confidence 45666666533 368889999999999999999998876543
No 438
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=20.28 E-value=12 Score=44.95 Aligned_cols=48 Identities=2% Similarity=-0.129 Sum_probs=40.0
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK 1160 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r 1160 (2014)
.||.+.+..+.+.+|.++...+. ..++.+|++++++|++||.++|.+|
T Consensus 254 ~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R 301 (336)
T 4g3f_A 254 HPWTQYFRGPLCLKIASEPPPIR-EIPPSCAPLTAQAIQEGLRKEPVHR 301 (336)
T ss_dssp CSSTTTCCSCCHHHHHHSCCGGG-GSCTTSCHHHHHHHHHHTCSSGGGS
T ss_pred CCCCCCCHHHHHHHHHcCCCCch-hcCccCCHHHHHHHHHHccCCHhHC
Confidence 58888888888888988766543 3467899999999999999999988
No 439
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=20.10 E-value=14 Score=44.18 Aligned_cols=52 Identities=12% Similarity=0.108 Sum_probs=42.9
Q ss_pred EeecChhHHHHHHHHHhhcccccccccccccccHHHHHHhhcCHHHHHH-----HHHHHHH
Q psy5584 1112 LEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQK-----KLEHFFR 1167 (2014)
Q Consensus 1112 lPF~~~~~~~~~~~Il~~~~~f~~~~~~~vs~~~kdli~~~L~~~~~~r-----~L~h~~~ 1167 (2014)
+||.+.+..+....+..+.+.+. ..+|+++++++++||..+|.+| +++|+|.
T Consensus 212 ~pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~ 268 (328)
T 3fe3_A 212 LPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268 (328)
T ss_dssp CSSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTT
T ss_pred CCCCCCCHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhh
Confidence 58888888889999998876554 2478999999999999999988 4777665
Done!