RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy5584
(2014 letters)
>1d2v_C Myeloperoxidase; heme-protein, oxidoreductase, peroxidase-bromide;
HET: NAG BMA MAN FUC HEM; 1.75A {Homo sapiens} SCOP:
a.93.1.2 PDB: 1cxp_C* 1d5l_C* 1d7w_C* 1dnu_C* 1dnw_C*
1mhl_C* 1myp_C* 4dl1_C* 3zs0_C* 3f9p_C* 3zs1_C*
Length = 466
Score = 310 bits (795), Expect = 2e-93
Identities = 133/537 (24%), Positives = 225/537 (41%), Gaps = 100/537 (18%)
Query: 444 IEIEKCDEMYDKDCEGGKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEA 503
++I D IPF R+ S + R QIN ++S++D S +Y + E
Sbjct: 16 LKIPPNDPRIKN---QADCIPFFRSCPA--CPGSNITIRNQINALTSFVDASMVYGSEEP 70
Query: 504 WLNAMRSFTNGSLATDASGKMPVKNTMRVPLFNNPVPHSLRTL--SPERLYLLGDARSNQ 561
+R+ +N + + +P N L T + +L GD RS++
Sbjct: 71 LARNLRNMSNQLGLLAVNQRFQDNGRALLPFDNLHDDPCLLTNRSARIPCFLAGDTRSSE 130
Query: 562 NPALLAFSILFFRWHNVIAAQIEDKHPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLG 621
P L + L R HN +A +++ +P E ++Q+ R++V A +Q + +Y+P LG
Sbjct: 131 MPELTSMHTLLLREHNRLATELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLG 190
Query: 622 RSLSPYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRG 681
PT P YR
Sbjct: 191 -----------------------------------------------PTAMRKYLPTYRS 203
Query: 682 YKMDVHPGISHVFQTAAFRFGHSLIPPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNV 741
Y V P I++VF T AFR+GH+LI P ++R D + +
Sbjct: 204 YNDSVDPRIANVF-TNAFRYGHTLIQPFMFRLDNR-------------------YQPMEP 243
Query: 742 DPAIRLCSNWWDSTNVMTYSTLEEILMGMASQLSE--KEDAVLCSDIRDKLFGPNEFSRR 799
+P + L ++ S V+ ++ IL G+ + ++ +++ + +IR++LF
Sbjct: 244 NPRVPLSRVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMRIGL 303
Query: 800 DLGALNIMRGRDNGIADYNTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSY 859
DL ALN+ R RD+G+ YN R L + ++ L ++ ++L Y
Sbjct: 304 DLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQ-------LGTVLRNLKLARKLMEQY 356
Query: 860 GNSLDNIDLYIGGMLESHE---GPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEV 916
G +NID+++GG+ E + GPL II QF +LRD DRFW+EN G+F+ +
Sbjct: 357 GT-PNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWEN--EGVFSMQQR 413
Query: 917 EAIRKITLWDIIVNATDIGADAIQKNVFFWNATDPCPQPAQLNASMMMPCSYLKGFD 973
+A+ +I+L II + T I + KN F + + P + CS L +
Sbjct: 414 QALAQISLPRIICDNTGI--TTVSKNNIFMSNSYPRD---------FVNCSTLPALN 459
Score = 92.2 bits (228), Expect = 4e-19
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 16/119 (13%)
Query: 162 SYGNSLDNIDLYIGGMLESHE---GPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAA 218
+ +NID+++GG+ E + GPL II QF +LRD DRFW+EN G+F+
Sbjct: 354 EQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRFWWEN--EGVFSMQ 411
Query: 219 EVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDPCPQPAQLNASMMMPCSYLKGFD 277
+ +A+ +I+L II + T I + KN F + + P + CS L +
Sbjct: 412 QRQALAQISLPRIICDNTGI--TTVSKNNIFMSNSYPRD---------FVNCSTLPALN 459
>3q9k_A Lactoperoxidase, LPO; bovine lactoperoxidase, oxidoreductase,
phenyl isothiocyanat iodide, PEG, edman reagent; HET:
SEP HEM NAG; 1.70A {Bos taurus} PDB: 2ips_A* 2nqx_A*
2pum_A* 2qpk_A* 2qqt_A* 2qrb_A* 2pt3_A* 3eri_A* 3gc1_A*
3gcj_A* 3gck_A* 3gcl_A* 3i6n_A* 3bxi_A* 3krq_A* 3ogw_A*
3py4_A* 3nyh_A* 3ql6_A* 3r4x_A* ...
Length = 595
Score = 303 bits (775), Expect = 4e-89
Identities = 130/566 (22%), Positives = 241/566 (42%), Gaps = 105/566 (18%)
Query: 422 GQVVSSEIVMASESGCPIEMHEIEIEKCDEMYDKDCE-------------GGKYIPFHRA 468
GQ+V ++ A E+ H + + +C GK +PF RA
Sbjct: 104 GQIVDHDLDFAPETELGSNEHSKTQCEEYCIQGDNCFPIMFPKNDPKLKTQGKCMPFFRA 163
Query: 469 GYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATDASGKMPVKN 528
G+ T + R+QIN V+S++D S +Y + + + +R+ ++ + +
Sbjct: 164 GFVCPTPPYQSLAREQINAVTSFLDASLVYGSEPSLASRLRNLSSPLGLMAVNQEAWDHG 223
Query: 529 TMRVPLFNNPVP--HSLRTLSPERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDK 586
+P N + T + +L GD R+++ L L R HN +A +++
Sbjct: 224 LAYLPFNNKKPSPCEFINTTARVPCFLAGDFRASEQILLATAHTLLLREHNRLARELKKL 283
Query: 587 HPELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHPGISHVFQTAA 646
+P + E+++Q+ R+++ A +Q + +Y+P LG + +
Sbjct: 284 NPHWNGEKLYQEARKILGAFIQIITFRDYLPIVLGSEMQKWIP----------------- 326
Query: 647 FRFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSLI 706
PY+GY V P IS+VF T AFRFGH +
Sbjct: 327 -------------------------------PYQGYNNSVDPRISNVF-TFAFRFGHMEV 354
Query: 707 PPGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTNVMTYSTLEEI 766
P + R DE + + L + ++++ ++ ++ +
Sbjct: 355 PSTVSRLDENYQPWGP-------------------EAELPLHTLFFNTWRIIKDGGIDPL 395
Query: 767 LMGMASQLSE--KEDAVLCSDIRDKLFGP-NEFSRRDLGALNIMRGRDNGIADYNTVRSN 823
+ G+ ++ S+ +D ++ S++R+KLF P ++ DL A+N+ R RD+G+ YN+ R
Sbjct: 396 VRGLLAKKSKLMNQDKMVTSELRNKLFQPTHKIHGFDLAAINLQRCRDHGMPGYNSWRGF 455
Query: 824 YNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESHE---GP 880
L + K+ L+ V K + K+L Y DNID++IGG E
Sbjct: 456 CGLSQPKTLKGLQTVLKN-------KILAKKLMDLYKT-PDNIDIWIGGNAEPMVERGRV 507
Query: 881 GPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQ 940
GPL ++ QF ++RD DRFW+EN G+FT + ++++K++ +I + T I +
Sbjct: 508 GPLLACLLGRQFQQIRDGDRFWWEN--PGVFTEKQRDSLQKVSFSRLICDNTHI--TKVP 563
Query: 941 KNVFFW----NATDPCPQPAQLNASM 962
+ F + C +L+ S
Sbjct: 564 LHAFQANNYPHDFVDCSTVDKLDLSP 589
Score = 87.3 bits (215), Expect = 2e-17
Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 11/141 (7%)
Query: 133 RSLVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNIDLYIGGMLESHE---GPGPLFT 189
R +++ G KI+ + + DNID++IGG E GPL
Sbjct: 453 RGFCGLSQPKTLKGLQTVLKNKILAKKLMDLYKTPDNIDIWIGGNAEPMVERGRVGPLLA 512
Query: 190 NIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFF 249
++ QF ++RD DRFW+EN G+FT + ++++K++ +I + T I + + F
Sbjct: 513 CLLGRQFQQIRDGDRFWWEN--PGVFTEKQRDSLQKVSFSRLICDNTHI--TKVPLHAFQ 568
Query: 250 W----NATDPCPQPAQLNASM 266
+ C +L+ S
Sbjct: 569 ANNYPHDFVDCSTVDKLDLSP 589
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase,
cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM;
1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A*
3ntb_A* 3q7d_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A*
6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A*
3hs6_A* 3hs7_A* 3krk_A* ...
Length = 587
Score = 277 bits (709), Expect = 2e-80
Identities = 64/497 (12%), Positives = 138/497 (27%), Gaps = 117/497 (23%)
Query: 471 DRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATDASGK---MPVK 527
+ T + +D + IY + + +R F +G L G P
Sbjct: 176 HQFFKTDHKRGPGFTRGLGHGVDLNHIYGETLDRQHKLRLFKDGKLKYQVIGGEVYPPTV 235
Query: 528 NTMRVPLFNNPVPHSLRTLSPERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKH 587
+V + P + + +G P L+ ++ ++ R HN + ++ +H
Sbjct: 236 KDTQVEMIYPP------HIPENLQFAVGQEVFGLVPGLMMYATIWLREHNRVCDILKQEH 289
Query: 588 PELSDEEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHPGISHVFQTAAF 647
PE DE++FQ +R +++ ++ +Y+ G
Sbjct: 290 PEWGDEQLFQTSRLILIGETIKIVIEDYVQHLSGYHFK---------------------- 327
Query: 648 RFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSLIP 707
P + + H L+P
Sbjct: 328 --------------------------LKFDPELLFNQQFQYQNRIASEFNTLYHWHPLLP 361
Query: 708 PGIYRRDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTNVMTYSTLEEIL 767
D++ +FK + + +++ L + +
Sbjct: 362 DTFNIEDQEYSFK-----------------------------QFLYNNSILLEHGLTQFV 392
Query: 768 MGMASQLSEKEDAVLCSDIRDKLFGPNEFSRRDLGALNIMRGRDNGIADYNTVRSNYNLK 827
Q++ + R+ + + + +I + R+ N R ++LK
Sbjct: 393 ESFTRQIAGRVA-----GGRN-----VPIAVQAVAKASIDQSREMKYQSLNEYRKRFSLK 442
Query: 828 KLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESHE---GPGPLF 884
S+ +L KE+ LK Y + +D ++LY ++E G
Sbjct: 443 PYTSFEEL----------TGEKEMAAELKALY-SDIDVMELYPALLVEKPRPDAIFGETM 491
Query: 885 TNIILEQFTRLRDADRFWFEN--TENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKN 942
+ + + + + I ++ +I N G N
Sbjct: 492 VELGAPFSLKGLMGNPICSPQYWKPSTFGGEVGFKIINTASIQSLICNNVK-GCPFTSFN 550
Query: 943 VF----FWNATDPCPQP 955
V AT
Sbjct: 551 VQDPQPTKTATINASAS 567
Score = 95.6 bits (237), Expect = 6e-20
Identities = 15/112 (13%), Positives = 30/112 (26%), Gaps = 13/112 (11%)
Query: 157 LRGYYSYGNSLDNIDLYIGGMLESHE---GPGPLFTNIILEQFTRLRDADRFWFEN--TE 211
L+ Y + +D ++LY ++E G + + +
Sbjct: 460 LKALY---SDIDVMELYPALLVEKPRPDAIFGETMVELGAPFSLKGLMGNPICSPQYWKP 516
Query: 212 NGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVF----FWNATDPCPQP 259
+ + I ++ +I N G NV AT
Sbjct: 517 STFGGEVGFKIINTASIQSLICNNVK-GCPFTSFNVQDPQPTKTATINASAS 567
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal
anti-inflammatory drug, peroxi prostaglandin synthase,
EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A
{Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A*
2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A*
2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A*
1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Length = 553
Score = 266 bits (681), Expect = 4e-77
Identities = 67/477 (14%), Positives = 134/477 (28%), Gaps = 113/477 (23%)
Query: 476 TSPNSPRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATDASGKMPVKNTMRVPLF 535
TS + +D IY + +R F +G L K + N P
Sbjct: 181 TSGKMGPGFTKALGHGVDLGHIYGDNLERQYQLRLFKDGKL------KYQMLNGEVYPPS 234
Query: 536 NNPVP---HSLRTLSPERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSD 592
P H R + P+ +G P L+ ++ ++ R HN + ++ +HP D
Sbjct: 235 VEEAPVLMHYPRGIPPQSQMAVGQEVFGLLPGLMLYATIWLREHNRVCDLLKAEHPTWGD 294
Query: 593 EEIFQKTRRLVVASLQNVIAYEYIPAFLGRSLSPYRGYKMDVHPGISHVFQTAAFRFGHS 652
E++FQ R +++ ++ EY+ G L
Sbjct: 295 EQLFQTARLILIGETIKIVIEEYVQQLSGYFLQL-------------------------- 328
Query: 653 LIPPGIYRRDEKCNFKPTVKGDPAPPYRGYKMDVHPGISHVFQTAAFRFGHSLIPPGIYR 712
K DP G + I+ F H L+P
Sbjct: 329 -------------------KFDPEL-LFGAQFQYRNRIAMEF--NQLYHWHPLMPDSFRV 366
Query: 713 RDEKCNFKPTVKGDPAIRLCSNWWDSTNVDPAIRLCSNWWDSTNVMTYSTLEEILMGMAS 772
+ +++ + +T+++ +E ++ +
Sbjct: 367 GPQDYSYE-----------------------------QFLFNTSMLVDYGVEALVDAFSR 397
Query: 773 QLSEKEDAVLCSDIRDKLFGPNEFSRRDLGALNIMRGRDNGIADYNTVRSNYNLKKLKSW 832
Q + + D + I R + +N R + +K S+
Sbjct: 398 QPAGRIGGGRNID----------HHILHVAVDVIKESRVLRLQPFNEYRKRFGMKPYTSF 447
Query: 833 NDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESHE---GPGPLFTNIIL 889
+L KE+ L+ Y +D ++ Y G +LE G +
Sbjct: 448 QELTGE----------KEMAAELEELY-GDIDALEFYPGLLLEKCHPNSIFGESMIEMGA 496
Query: 890 EQFTRLRDADRFWFEN--TENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVF 944
+ + + ++ TL ++ T + +V
Sbjct: 497 PFSLKGLLGNPICSPEYWKASTFGGEVGFNLVKTATLKKLVCLNTK-TCPYVSFHVP 552
Score = 93.6 bits (232), Expect = 2e-19
Identities = 12/97 (12%), Positives = 26/97 (26%), Gaps = 9/97 (9%)
Query: 157 LRGYYSYGNSLDNIDLYIGGMLESHE---GPGPLFTNIILEQFTRLRDADRFWFEN--TE 211
L Y +D ++ Y G +LE G + + +
Sbjct: 460 LEELY---GDIDALEFYPGLLLEKCHPNSIFGESMIEMGAPFSLKGLLGNPICSPEYWKA 516
Query: 212 NGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVF 248
+ ++ TL ++ T + +V
Sbjct: 517 STFGGEVGFNLVKTATLKKLVCLNTK-TCPYVSFHVP 552
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain,
oxidoreductase; 2.00A {Homo sapiens}
Length = 186
Score = 164 bits (416), Expect = 2e-46
Identities = 61/196 (31%), Positives = 104/196 (53%), Gaps = 15/196 (7%)
Query: 1823 IRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLW 1882
I ++GPFG ++D + +EV ++VG GIGVTP+ASIL + + N + + KK+YF W
Sbjct: 1 IAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNA-TNLKLKKIYFYW 59
Query: 1883 ICPSHKHFEWFIDVLRDVEKK----DVTNVLEIHIFITQFFHKFDLRTTMLYICENHFQR 1938
+C FEWF D+L+ +E + + L +I++T + + + +H +
Sbjct: 60 LCRDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLTGWDE-----SQANHFAVHHDEE 114
Query: 1939 LSKSSMFTGLKAVNHFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSIMSACEEVN 1998
+ TGLK +GRP+ + K + +H ++IGVF CGP L +++ +
Sbjct: 115 ---KDVITGLKQKTLYGRPNWDNEFKTIASQHPN-TRIGVFLCGPEALAETLSKQSISNS 170
Query: 1999 -KGRKLPYFIHHFENF 2013
G + +FI + ENF
Sbjct: 171 ESGPRGVHFIFNKENF 186
>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate
cyclase activating protein, GCAP1, GCAP-1, calcium,
lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}
Length = 198
Score = 113 bits (284), Expect = 2e-28
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 6/133 (4%)
Query: 1355 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
L+ EF G+K S +V MF D + DG I F E++ + L +G + KL
Sbjct: 31 QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL 90
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFL 1470
R F + D D NG ID+GEL +++++ + R E + +F ++ L
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE--AMTAEEFTNMVFDKIDINGDGEL 148
Query: 1471 TYQDFKLMMRDYK 1483
+ ++F ++ +
Sbjct: 149 SLEEFMEGVQKDE 161
Score = 96.8 bits (241), Expect = 1e-22
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 1196 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1251
L+ EF G+K S +V MF D + DG I F E++ + L +G + KL
Sbjct: 31 QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL 90
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
R F + D D NG ID+GEL +++++ + R E + +F
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNE--AMTAEEFTNMVFD 138
Score = 92.1 bits (229), Expect = 5e-21
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 53 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 108
L+ EF G+K S +V MF D + DG I F E++ + L +G + KL
Sbjct: 31 QLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQKL 90
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
R F + D D NG ID+GEL +++++ +
Sbjct: 91 RWYFKLYDVDGNGCIDRGELLNIIKAIRAI 120
Score = 49.0 bits (117), Expect = 3e-06
Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 1201 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLF-------SRGHTEDK 1250
E+ +AL + +R F + D DG+G I E L+ + E+
Sbjct: 73 EYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEF 132
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLR---SLVEMARTTSLTDSQVTELIDGMFQSP 1303
++FD D + +G + E E ++ L+++ T SL + + +LI ++P
Sbjct: 133 TNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDIL-TRSLDLTHIVKLIQNDGKNP 187
Score = 46.7 bits (111), Expect = 2e-05
Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 35/173 (20%)
Query: 1 QQSEQLDRRQLRERRQ--KKL-------EHFFREAYALTFGLKPGEKRRRDDETGEVVMR 51
+ E+L + + + + F++ + L ++ E +
Sbjct: 6 KAVEELSATECHQWYKKFMTECPSGQLTLYEFKQFFGLKNLSP------SANKYVEQMFE 59
Query: 52 T-------SLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLF-- 99
T + E+ +AL + +R F + D DG+G I E L+ +
Sbjct: 60 TFDFNKDGYIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRA 119
Query: 100 -----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEMARTSFP 144
E+ ++FD D + +G + E E ++ L+++ S
Sbjct: 120 INRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRSLD 172
>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase,
transmembrane, calcium BI protein; 2.40A {Oryza sativa
japonica group}
Length = 179
Score = 107 bits (269), Expect = 1e-26
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDK---DGDGRISFQEFLDTVVLFSRGHTEDKLRI 1412
L R+ F +GM F MF+ + + ++ E D + +++LR
Sbjct: 43 LLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRT 102
Query: 1413 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTY 1472
FDM D + +G + E+ E++ A S + E + ++ + ++
Sbjct: 103 FFDMVDKNADGRLTAEEVKEIIALSAS-ANKLSKIKERADEYTALIMEELDPTNLGYIEM 161
Query: 1473 QDFKLMM 1479
+D + ++
Sbjct: 162 EDLEALL 168
Score = 95.5 bits (237), Expect = 2e-22
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDK---DGDGRISFQEFLDTVVLFSRGHTEDKLRI 1253
L R+ F +GM F MF+ + + ++ E D + +++LR
Sbjct: 43 LLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRT 102
Query: 1254 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
FDM D + +G + E+ E++ A S + E + +
Sbjct: 103 FFDMVDKNADGRLTAEEVKEIIALSAS-ANKLSKIKERADEYTALIME 149
Score = 89.0 bits (220), Expect = 4e-20
Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDK---DGDGRISFQEFLDTVVLFSRGHTEDKLRI 110
L R+ F +GM F MF+ + + ++ E D + +++LR
Sbjct: 43 LLRSRFGKCIGMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFYEQLTDQGFDNRLRT 102
Query: 111 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKI 155
FDM D + +G + E+ E++ + S A I
Sbjct: 103 FFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALI 147
>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase
activating protein, GCAP, GCAP3, GCAP-3, lyase activator;
3.00A {Homo sapiens}
Length = 211
Score = 107 bits (270), Expect = 2e-26
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Query: 1355 SLSRAEFASALGM----KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
+ EF + LG+ + + ++N D + DG + F EF+ V L + E KL
Sbjct: 36 LQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKL 95
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFL 1470
+ F + D D NG IDK EL +M ++ + E I+ +F +++ L
Sbjct: 96 KWYFKLYDADGNGSIDKNELLDMFMAVQAL---NGQQTLSPEEFINLVFHKIDINNDGEL 152
Query: 1471 TYQDFKLMMR 1480
T ++F M
Sbjct: 153 TLEEFINGMA 162
Score = 92.2 bits (229), Expect = 8e-21
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 1196 SLSRAEFASALGM----KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1251
+ EF + LG+ + + ++N D + DG + F EF+ V L + E KL
Sbjct: 36 LQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKL 95
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
+ F + D D NG IDK EL +M ++ + E I+ +F
Sbjct: 96 KWYFKLYDADGNGSIDKNELLDMFMAVQAL---NGQQTLSPEEFINLVFH 142
Score = 86.4 bits (214), Expect = 6e-19
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 53 SLSRAEFASALGM----KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 108
+ EF + LG+ + + ++N D + DG + F EF+ V L + E KL
Sbjct: 36 LQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKL 95
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
+ F + D D NG IDK EL +M ++ +
Sbjct: 96 KWYFKLYDADGNGSIDKNELLDMFMAVQAL 125
Score = 49.4 bits (118), Expect = 3e-06
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 1201 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTV------VLFSRGHTEDKL 1251
EF +A+ + ++ F + D DG+G I E LD E+ +
Sbjct: 78 EFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFI 137
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLR---SLVEMARTTSLTDSQVTELIDGMFQSPRELML 1308
++F D + +G + E + L+E+ S S V +I Q E
Sbjct: 138 NLVFHKIDINNDGELTLEEFINGMAKDQDLLEIV-YKSFDFSNVLRVICNGKQPDMETDS 196
Query: 1309 AKAETR 1314
+K+ +
Sbjct: 197 SKSPDK 202
Score = 49.0 bits (117), Expect = 4e-06
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 12/99 (12%)
Query: 58 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTV------VLFSRGHTEDKL 108
EF +A+ + ++ F + D DG+G I E LD E+ +
Sbjct: 78 EFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFI 137
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLR---SLVEMARTSFP 144
++F D + +G + E + L+E+ SF
Sbjct: 138 NLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYKSFD 176
Score = 47.5 bits (113), Expect = 1e-05
Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 13/114 (11%)
Query: 1360 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTV------VLFSRGHTEDKL 1410
EF +A+ + ++ F + D DG+G I E LD E+ +
Sbjct: 78 EFIAAVNLIMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFI 137
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLR---SLVEMARTTSLTDSQVTELIDGMFQD 1461
++F D + +G + E + L+E+ S S V +I Q
Sbjct: 138 NLVFHKIDINNDGELTLEEFINGMAKDQDLLEIV-YKSFDFSNVLRVICNGKQP 190
Score = 39.0 bits (91), Expect = 0.007
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 50 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 96
+ + + S F+ ++F+ +D + DG ++ +EF++ +
Sbjct: 115 LLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGM 161
Score = 39.0 bits (91), Expect = 0.007
Identities = 8/47 (17%), Positives = 23/47 (48%)
Query: 1193 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1239
+ + + S F+ ++F+ +D + DG ++ +EF++ +
Sbjct: 115 LLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGM 161
>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific
guanylate cyclase activator; 2.40A {Bos taurus} SCOP:
a.39.1.5
Length = 193
Score = 104 bits (260), Expect = 3e-25
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 7/151 (4%)
Query: 1355 SLSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
LS EF G + F +F D +GDG I F+EF+ + + SRG E KL
Sbjct: 42 HLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKL 101
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT---SLTDSQVTELIDGMFQDAGLDSK 1467
+ F M D D NG I K E+ E+++++ +M + +S + + +F+ +
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRD 161
Query: 1468 DFLTYQDFKLMMRDYKGDFVAIGLDCKGAKQ 1498
L+ ++F + + D A Q
Sbjct: 162 GKLSLEEFIRGAKSDPSIVRLLQCDPSSAGQ 192
Score = 88.0 bits (218), Expect = 1e-19
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%)
Query: 1196 SLSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1251
LS EF G + F +F D +GDG I F+EF+ + + SRG E KL
Sbjct: 42 HLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKL 101
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT---SLTDSQVTELIDGMFQ 1301
+ F M D D NG I K E+ E+++++ +M + +S + + +F+
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFR 154
Score = 81.8 bits (202), Expect = 2e-17
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 53 SLSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 108
LS EF G + F +F D +GDG I F+EF+ + + SRG E KL
Sbjct: 42 HLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKL 101
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
+ F M D D NG I K E+ E+++++ +M + +T K
Sbjct: 102 KWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRT 149
Score = 50.2 bits (120), Expect = 1e-06
Identities = 31/177 (17%), Positives = 53/177 (29%), Gaps = 40/177 (22%)
Query: 1223 DKDGDGRISFQEFLDTVVLFSRGHTEDKL-RIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281
G +S +EF F K +F D + +G ID E L
Sbjct: 36 RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIAL------ 89
Query: 1282 ARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKR 1341
+ T+ Q + M+ ++KAE + + Y + K
Sbjct: 90 SVTSRGKLEQKLKWAFSMYDLDGNGYISKAE--------MLEIVQAIYKMV---SSVMKM 138
Query: 1342 RRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
D+ T E +F +D + DG++S +EF+
Sbjct: 139 PEDESTPEKR----------------------TEKIFRQMDTNRDGKLSLEEFIRGA 173
Score = 43.3 bits (102), Expect = 3e-04
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 18/99 (18%)
Query: 58 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT---------- 104
EF AL + S ++ F++ D DG+G IS E L+ V + +
Sbjct: 84 EFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 143
Query: 105 --EDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 138
E + IF D +R+G + E + S+V +
Sbjct: 144 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182
Score = 43.3 bits (102), Expect = 3e-04
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 18/99 (18%)
Query: 1201 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT---------- 1247
EF AL + S ++ F++ D DG+G IS E L+ V + +
Sbjct: 84 EFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES 143
Query: 1248 --EDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 1281
E + IF D +R+G + E + S+V +
Sbjct: 144 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRL 182
Score = 36.0 bits (83), Expect = 0.060
Identities = 13/54 (24%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 80 DKDGDGRISFQEFLDTVVLFSRGHTEDKL-RIIFDMCDNDRNGVIDKGELAEML 132
G +S +EF F K +F D + +G ID E L
Sbjct: 36 RDCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIAL 89
>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo
sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*
Length = 183
Score = 103 bits (258), Expect = 4e-25
Identities = 25/127 (19%), Positives = 61/127 (48%), Gaps = 3/127 (2%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
+ + S +K++ F + + +SF++FLD + +FS + K
Sbjct: 45 VPFEQILSLPELKANP-FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYA 103
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D +G +++ +L+ ++ L T L+ S++ +LID + +++ +D +
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 1474 DFKLMMR 1480
+F+ ++
Sbjct: 164 EFQHVIS 170
Score = 87.1 bits (216), Expect = 2e-19
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
+ + S +K++ F + + +SF++FLD + +FS + K
Sbjct: 45 VPFEQILSLPELKANP-FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYA 103
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
F + D D +G +++ +L+ ++ L T L+ S++ +LID + +
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILE 150
Score = 71.7 bits (176), Expect = 4e-14
Identities = 19/107 (17%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
+ + S +K++ F + + +SF++FLD + +FS + K
Sbjct: 45 VPFEQILSLPELKANP-FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYA 103
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIVLR 158
F + D D +G +++ +L+ ++ L + S ++ +L
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILE 150
Score = 40.9 bits (96), Expect = 0.001
Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 32/189 (16%)
Query: 1278 LVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKP 1337
L E T LT ++ F L E R E LK
Sbjct: 5 LAEYQDLTFLTKQEILLAHRR-FCE-----LLPQEQRSVESSLRAQVPFEQILSLPELKA 58
Query: 1338 GEKRRR-------DDETGEVVMRTSLSRAEFASALGMKSDA----VFVRMMFNIVDKDGD 1386
+ R + +F L + SD + F I D D D
Sbjct: 59 NPFKERICRVFSTSPAKDSLSFE------DFLDLLSVFSDTATPDIKSHYAFRIFDFDDD 112
Query: 1387 GRISFQEFLDTVVLFSRGHTEDKLR---------IIFDMCDNDRNGVIDKGELAEMLRSL 1437
G ++ ++ V + + +L I + D DR+G I+ E ++
Sbjct: 113 GTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 172
Query: 1438 VEMARTTSL 1446
+ A + +
Sbjct: 173 PDFASSFKI 181
Score = 40.5 bits (95), Expect = 0.002
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 9/82 (10%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR---------IIFDMCDNDRNGV 1265
F I D D DG ++ ++ V + + +L I + D DR+G
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 1266 IDKGELAEMLRSLVEMARTTSL 1287
I+ E ++ + A + +
Sbjct: 160 INLSEFQHVISRSPDFASSFKI 181
Score = 40.5 bits (95), Expect = 0.002
Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 9/72 (12%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR---------IIFDMCDNDRNGV 122
F I D D DG ++ ++ V + + +L I + D DR+G
Sbjct: 100 SHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGT 159
Query: 123 IDKGELAEMLRS 134
I+ E ++
Sbjct: 160 INLSEFQHVISR 171
Score = 34.4 bits (79), Expect = 0.18
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTV 96
+ + D D DG I+ EF +
Sbjct: 144 LIDNILEESDIDRDGTINLSEFQHVI 169
Score = 34.4 bits (79), Expect = 0.18
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTV 1239
+ + D D DG I+ EF +
Sbjct: 144 LIDNILEESDIDRDGTINLSEFQHVI 169
>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport,
ionic channel, membrane, PO potassium channel, potassium
transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A
Length = 229
Score = 103 bits (259), Expect = 9e-25
Identities = 26/144 (18%), Positives = 63/144 (43%), Gaps = 7/144 (4%)
Query: 1356 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
++ F + +FN D D +G +SF++F+ + + RG ++KL
Sbjct: 82 VNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLN 141
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEM---ARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
F++ D +++G I K E+ ++++++ +M L + + ++ FQ +
Sbjct: 142 WAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDG 201
Query: 1469 FLTYQDFKLMMRDYKGDFVAIGLD 1492
+T +F + + ++ L
Sbjct: 202 VVTIDEFIESCQKDENIMRSMQLF 225
Score = 88.0 bits (218), Expect = 2e-19
Identities = 23/112 (20%), Positives = 53/112 (47%), Gaps = 7/112 (6%)
Query: 1197 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
++ F + +FN D D +G +SF++F+ + + RG ++KL
Sbjct: 82 VNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLN 141
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEM---ARTTSLTDSQVTELIDGMFQ 1301
F++ D +++G I K E+ ++++++ +M L + + ++ FQ
Sbjct: 142 WAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQ 193
Score = 80.3 bits (198), Expect = 1e-16
Identities = 21/107 (19%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 54 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
++ F + +FN D D +G +SF++F+ + + RG ++KL
Sbjct: 82 VNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLN 141
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
F++ D +++G I K E+ ++++++ +M + V
Sbjct: 142 WAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHV 188
Score = 42.6 bits (100), Expect = 7e-04
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 18/104 (17%)
Query: 53 SLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLF---------- 99
++S +F L + + FN+ D + DG I+ +E LD +
Sbjct: 118 AVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYP 177
Query: 100 --SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 138
+ F D +++GV+ E E + +++
Sbjct: 178 VLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRS 221
Score = 42.6 bits (100), Expect = 7e-04
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 18/104 (17%)
Query: 1196 SLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVLF---------- 1242
++S +F L + + FN+ D + DG I+ +E LD +
Sbjct: 118 AVSFEDFIKGLSILLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYP 177
Query: 1243 --SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 1281
+ F D +++GV+ E E + +++
Sbjct: 178 VLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRS 221
>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport
protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB:
2nz0_A 2i2r_E
Length = 183
Score = 101 bits (252), Expect = 2e-24
Identities = 25/136 (18%), Positives = 59/136 (43%), Gaps = 7/136 (5%)
Query: 1356 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
++ F + + +FN D G + F++F+ + + RG +KLR
Sbjct: 36 VNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 95
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMART---TSLTDSQVTELIDGMFQDAGLDSKD 1468
F++ D +++G I+K E+ ++++++ +M L + + +D FQ +
Sbjct: 96 WTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDG 155
Query: 1469 FLTYQDFKLMMRDYKG 1484
+T +F ++
Sbjct: 156 IVTLDEFLESXQEDDN 171
Score = 87.2 bits (216), Expect = 2e-19
Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 1197 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
++ F + + +FN D G + F++F+ + + RG +KLR
Sbjct: 36 VNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 95
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEMART---TSLTDSQVTELIDGMFQ 1301
F++ D +++G I+K E+ ++++++ +M L + + +D FQ
Sbjct: 96 WTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 147
Score = 77.9 bits (192), Expect = 3e-16
Identities = 21/107 (19%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Query: 54 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
++ F + + +FN D G + F++F+ + + RG +KLR
Sbjct: 36 VNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLR 95
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
F++ D +++G I+K E+ ++++++ +M T + V
Sbjct: 96 WTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHV 142
Score = 39.4 bits (92), Expect = 0.004
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 23 FREAYALTFG-LKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 78
F++ YA F + S+ +F +AL + +R FN+
Sbjct: 41 FKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNL 100
Query: 79 VDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDMCDNDRNGVIDKG 126
D + DG I+ +E +D V + + F D +++G++
Sbjct: 101 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 160
Query: 127 ELAEMLRS 134
E E +
Sbjct: 161 EFLESXQE 168
Score = 39.4 bits (92), Expect = 0.004
Identities = 23/128 (17%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 1166 FREAYALTFG-LKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 1221
F++ YA F + S+ +F +AL + +R FN+
Sbjct: 41 FKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNL 100
Query: 1222 VDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDMCDNDRNGVIDKG 1269
D + DG I+ +E +D V + + F D +++G++
Sbjct: 101 YDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLD 160
Query: 1270 ELAEMLRS 1277
E E +
Sbjct: 161 EFLESXQE 168
>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding
protein; HET: MYR; NMR {Schizosaccharomyces pombe}
Length = 190
Score = 100 bits (251), Expect = 4e-24
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 7/132 (5%)
Query: 1356 LSRAEFASAL----GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
L+++EF + F +FN+ D D +G I F+EF+ + + SRG DKL
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI 102
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEM---ARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
F + D D NG+I E+ ++ ++ +M + + ++ +F +
Sbjct: 103 WAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDG 162
Query: 1469 FLTYQDFKLMMR 1480
LT ++F +
Sbjct: 163 QLTLEEFCEGSK 174
Score = 86.0 bits (213), Expect = 5e-19
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 1197 LSRAEFASAL----GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
L+++EF + F +FN+ D D +G I F+EF+ + + SRG DKL
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI 102
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEM---ARTTSLTDSQVTELIDGMFQ 1301
F + D D NG+I E+ ++ ++ +M + + ++ +F
Sbjct: 103 WAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFN 154
Score = 80.6 bits (199), Expect = 4e-17
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 54 LSRAEFASAL----GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
L+++EF + F +FN+ D D +G I F+EF+ + + SRG DKL
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI 102
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
F + D D NG+I E+ ++ ++ +M + T K V
Sbjct: 103 WAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRV 149
Score = 47.9 bits (114), Expect = 6e-06
Identities = 30/177 (16%), Positives = 55/177 (31%), Gaps = 40/177 (22%)
Query: 1223 DKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281
G ++ EF F G +F++ D D+NG ID E L
Sbjct: 36 KDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALS----- 90
Query: 1282 ARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKR 1341
+ ++ E + KL F+ + L
Sbjct: 91 -------------------------VTSRGELND----KLIWAFQ-----LYDLDNNGLI 116
Query: 1342 RRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
D+ V + + + V +FN++DK+ DG+++ +EF +
Sbjct: 117 SYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGS 173
Score = 40.6 bits (95), Expect = 0.002
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT------------EDKLRIIFDMCDNDR 119
+ F + D D +G IS+ E L V + E ++ IF+M D ++
Sbjct: 101 LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160
Query: 120 NGVIDKGELAEMLR---SLVEM 138
+G + E E + ++V
Sbjct: 161 DGQLTLEEFCEGSKRDPTIVSA 182
Score = 40.6 bits (95), Expect = 0.002
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT------------EDKLRIIFDMCDNDR 1262
+ F + D D +G IS+ E L V + E ++ IF+M D ++
Sbjct: 101 LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160
Query: 1263 NGVIDKGELAEMLR---SLVEM 1281
+G + E E + ++V
Sbjct: 161 DGQLTLEEFCEGSKRDPTIVSA 182
Score = 40.6 bits (95), Expect = 0.002
Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 15/82 (18%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT------------EDKLRIIFDMCDNDR 1421
+ F + D D +G IS+ E L V + E ++ IF+M D ++
Sbjct: 101 LIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNK 160
Query: 1422 NGVIDKGELAEMLR---SLVEM 1440
+G + E E + ++V
Sbjct: 161 DGQLTLEEFCEGSKRDPTIVSA 182
Score = 37.9 bits (88), Expect = 0.016
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTV 96
V +FN++DK+ DG+++ +EF +
Sbjct: 148 RVNKIFNMMDKNKDGQLTLEEFCEGS 173
Score = 37.9 bits (88), Expect = 0.016
Identities = 9/26 (34%), Positives = 18/26 (69%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTV 1239
V +FN++DK+ DG+++ +EF +
Sbjct: 148 RVNKIFNMMDKNKDGQLTLEEFCEGS 173
Score = 35.2 bits (81), Expect = 0.11
Identities = 14/57 (24%), Positives = 20/57 (35%), Gaps = 1/57 (1%)
Query: 80 DKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
G ++ EF F G +F++ D D+NG ID E L
Sbjct: 36 KDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVT 92
>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein,
EF-hand, calcium ION, metal binding protein; HET: 1PE
P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A
Length = 190
Score = 100 bits (250), Expect = 5e-24
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 7/132 (5%)
Query: 1356 LSRAEF----ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
L A F F +FN+ D++ DGRI F EF+ + + SRG ++KLR
Sbjct: 43 LDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR 102
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT---SLTDSQVTELIDGMFQDAGLDSKD 1468
F + D D +G I + E+ +++ ++ +M T ++ + +D +F ++
Sbjct: 103 WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADG 162
Query: 1469 FLTYQDFKLMMR 1480
LT Q+F+ +
Sbjct: 163 KLTLQEFQEGSK 174
Score = 86.4 bits (214), Expect = 4e-19
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 7/112 (6%)
Query: 1197 LSRAEF----ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
L A F F +FN+ D++ DGRI F EF+ + + SRG ++KLR
Sbjct: 43 LDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR 102
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT---SLTDSQVTELIDGMFQ 1301
F + D D +G I + E+ +++ ++ +M T ++ + +D +F
Sbjct: 103 WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFA 154
Score = 81.0 bits (200), Expect = 2e-17
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 54 LSRAEF----ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
L A F F +FN+ D++ DGRI F EF+ + + SRG ++KLR
Sbjct: 43 LDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLR 102
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
F + D D +G I + E+ +++ ++ +M + T K V
Sbjct: 103 WAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRV 149
Score = 40.2 bits (94), Expect = 0.002
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 16/128 (12%)
Query: 23 FREAYALTFGL-KPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 78
F++ Y F P + + + +EF AL + S +R F +
Sbjct: 48 FQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKL 107
Query: 79 VDKDGDGRISFQEFLDTV-VLFSRGHTEDKLRI-----------IFDMCDNDRNGVIDKG 126
D D DG I+ E LD V ++ +L IF M D + +G +
Sbjct: 108 YDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQ 167
Query: 127 ELAEMLRS 134
E E ++
Sbjct: 168 EFQEGSKA 175
Score = 40.2 bits (94), Expect = 0.002
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 16/128 (12%)
Query: 1166 FREAYALTFGL-KPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 1221
F++ Y F P + + + +EF AL + S +R F +
Sbjct: 48 FQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKL 107
Query: 1222 VDKDGDGRISFQEFLDTV-VLFSRGHTEDKLRI-----------IFDMCDNDRNGVIDKG 1269
D D DG I+ E LD V ++ +L IF M D + +G +
Sbjct: 108 YDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQ 167
Query: 1270 ELAEMLRS 1277
E E ++
Sbjct: 168 EFQEGSKA 175
Score = 40.2 bits (94), Expect = 0.002
Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 16/128 (12%)
Query: 1325 FREAYALTFGL-KPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 1380
F++ Y F P + + + +EF AL + S +R F +
Sbjct: 48 FQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKL 107
Query: 1381 VDKDGDGRISFQEFLDTV-VLFSRGHTEDKLRI-----------IFDMCDNDRNGVIDKG 1428
D D DG I+ E LD V ++ +L IF M D + +G +
Sbjct: 108 YDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQ 167
Query: 1429 ELAEMLRS 1436
E E ++
Sbjct: 168 EFQEGSKA 175
>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to
SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis
thaliana} PDB: 1v1g_A 1v1f_A
Length = 207
Score = 101 bits (252), Expect = 5e-24
Identities = 28/129 (21%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 1355 SLSRAEFASALGMKSDAV--FVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLR 1411
+ + EF AL + F +F++ D +G I F EF+ ++ +F +K++
Sbjct: 55 LIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVK 114
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLT 1471
F + D + G I++ EL EM+ +L+ + L++ + ++D F A + +
Sbjct: 115 FAFKLYDLRQTGFIEREELKEMVVALLHESE-LVLSEDMIEVMVDKAFVQADRKNDGKID 173
Query: 1472 YQDFKLMMR 1480
++K +
Sbjct: 174 IDEWKDFVS 182
Score = 86.0 bits (213), Expect = 9e-19
Identities = 26/109 (23%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 1196 SLSRAEFASALGMKSDAV--FVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLR 1252
+ + EF AL + F +F++ D +G I F EF+ ++ +F +K++
Sbjct: 55 LIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVK 114
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
F + D + G I++ EL EM+ +L+ + L++ + ++D F
Sbjct: 115 FAFKLYDLRQTGFIEREELKEMVVALLHESE-LVLSEDMIEVMVDKAFV 162
Score = 77.5 bits (191), Expect = 6e-16
Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Query: 53 SLSRAEFASALGMKSDAV--FVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLR 109
+ + EF AL + F +F++ D +G I F EF+ ++ +F +K++
Sbjct: 55 LIHKEEFQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVK 114
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKI 155
F + D + G I++ EL EM+ +L+ + V K
Sbjct: 115 FAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKA 160
Score = 40.5 bits (95), Expect = 0.002
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRIIFDMCDNDRNGVI 123
V+ F + D G I +E + VV E + F D +G I
Sbjct: 113 VKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKI 172
Query: 124 DKGELAEMLR 133
D E + +
Sbjct: 173 DIDEWKDFVS 182
Score = 40.5 bits (95), Expect = 0.002
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 8/70 (11%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRIIFDMCDNDRNGVI 1266
V+ F + D G I +E + VV E + F D +G I
Sbjct: 113 VKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKI 172
Query: 1267 DKGELAEMLR 1276
D E + +
Sbjct: 173 DIDEWKDFVS 182
Score = 34.0 bits (78), Expect = 0.31
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 80 DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
DG I +EF + +R IFD+ D RNGVI+ GE L
Sbjct: 49 SIIDDGLIHKEEF-QLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSL 100
>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer,
alternative splicing, apoptosis, cytoplasm, endoplasmic
reticulum, golgi apparatus; NMR {Mus musculus}
Length = 256
Score = 102 bits (255), Expect = 5e-24
Identities = 27/130 (20%), Positives = 60/130 (46%), Gaps = 3/130 (2%)
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1417
+ ++ + +FN D DG+G I F++F+ + + RG +KL+ F++
Sbjct: 115 KLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLY 174
Query: 1418 DNDRNGVIDKGELAEMLRSLVEMARTTS---LTDSQVTELIDGMFQDAGLDSKDFLTYQD 1474
D +++G I K E+ +++S+ +M + L + E ++ FQ + +T +
Sbjct: 175 DINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDE 234
Query: 1475 FKLMMRDYKG 1484
F + +
Sbjct: 235 FLETCQKDEN 244
Score = 86.6 bits (214), Expect = 1e-18
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 1199 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1258
+ ++ + +FN D DG+G I F++F+ + + RG +KL+ F++
Sbjct: 115 KLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLY 174
Query: 1259 DNDRNGVIDKGELAEMLRSLVEMARTTS---LTDSQVTELIDGMFQ 1301
D +++G I K E+ +++S+ +M + L + E ++ FQ
Sbjct: 175 DINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQ 220
Score = 79.7 bits (196), Expect = 4e-16
Identities = 22/101 (21%), Positives = 48/101 (47%)
Query: 56 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 115
+ ++ + +FN D DG+G I F++F+ + + RG +KL+ F++
Sbjct: 115 KLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWAFNLY 174
Query: 116 DNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
D +++G I K E+ +++S+ +M ++ V
Sbjct: 175 DINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHV 215
Score = 42.7 bits (100), Expect = 6e-04
Identities = 22/166 (13%), Positives = 53/166 (31%), Gaps = 28/166 (16%)
Query: 1 QQSEQLDRRQLRERRQK---------KLEHFFREAYALTFGLKPGEK-RRRDDETGEVVM 50
Q + +++L+ + E F+ Y+ F +
Sbjct: 83 QAQTKFTKKELQSLYRGFKNECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADG 142
Query: 51 RTSLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTV----------- 96
++ +F L + ++ FN+ D + DG I+ +E L +
Sbjct: 143 NGAIHFEDFVVGLSILLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHT 202
Query: 97 -VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 138
+ + + F D +++GV+ E E + +++
Sbjct: 203 YPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNS 248
Score = 42.3 bits (99), Expect = 7e-04
Identities = 20/138 (14%), Positives = 45/138 (32%), Gaps = 19/138 (13%)
Query: 1163 EHFFREAYALTFGLKPGEK-RRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMM 1218
E F+ Y+ F + ++ +F L + ++
Sbjct: 111 EDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHEKLKWA 170
Query: 1219 FNIVDKDGDGRISFQEFLDTV------------VLFSRGHTEDKLRIIFDMCDNDRNGVI 1266
FN+ D + DG I+ +E L + + + + F D +++GV+
Sbjct: 171 FNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVV 230
Query: 1267 DKGELAEMLR---SLVEM 1281
E E + +++
Sbjct: 231 TIDEFLETCQKDENIMNS 248
>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein,
EF-finger, transport protein; 2.30A {Homo sapiens} SCOP:
a.39.1.5
Length = 224
Score = 101 bits (253), Expect = 6e-24
Identities = 25/126 (19%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1417
+ +A + + +FN D G + F++F+ + + RG +KLR F++
Sbjct: 75 KQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY 134
Query: 1418 DNDRNGVIDKGELAEMLRSLVEMARTTS---LTDSQVTELIDGMFQDAGLDSKDFLTYQD 1474
D +++G I+K E+ ++++++ +M + L + + +D FQ + +T +
Sbjct: 135 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDE 194
Query: 1475 FKLMMR 1480
F +
Sbjct: 195 FLESCQ 200
Score = 86.6 bits (214), Expect = 7e-19
Identities = 23/106 (21%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 1199 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1258
+ +A + + +FN D G + F++F+ + + RG +KLR F++
Sbjct: 75 KQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY 134
Query: 1259 DNDRNGVIDKGELAEMLRSLVEMARTTS---LTDSQVTELIDGMFQ 1301
D +++G I+K E+ ++++++ +M + L + + +D FQ
Sbjct: 135 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQ 180
Score = 78.1 bits (192), Expect = 5e-16
Identities = 21/101 (20%), Positives = 48/101 (47%)
Query: 56 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 115
+ +A + + +FN D G + F++F+ + + RG +KLR F++
Sbjct: 75 KQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRWTFNLY 134
Query: 116 DNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
D +++G I+K E+ ++++++ +M T + V
Sbjct: 135 DINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHV 175
Score = 41.1 bits (96), Expect = 0.002
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 15/114 (13%)
Query: 1196 SLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVL----------- 1241
S+ +F +AL + +R FN+ D + DG I+ +E +D V
Sbjct: 105 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 164
Query: 1242 -FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1294
+ + F D +++G++ E E + + R+ L + + E
Sbjct: 165 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVMVE 218
Score = 41.1 bits (96), Expect = 0.002
Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 15/114 (13%)
Query: 1355 SLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVL----------- 1400
S+ +F +AL + +R FN+ D + DG I+ +E +D V
Sbjct: 105 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 164
Query: 1401 -FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1453
+ + F D +++G++ E E + + R+ L + + E
Sbjct: 165 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQLFQNVMVE 218
Score = 40.7 bits (95), Expect = 0.002
Identities = 19/96 (19%), Positives = 37/96 (38%), Gaps = 15/96 (15%)
Query: 53 SLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVVL----------- 98
S+ +F +AL + +R FN+ D + DG I+ +E +D V
Sbjct: 105 SVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYP 164
Query: 99 -FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
+ + F D +++G++ E E +
Sbjct: 165 VLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 200
>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand,
calcium-binding protein, guanylyl cyclase regulation,
lyase; NMR {Bos taurus} SCOP: a.39.1.5
Length = 204
Score = 100 bits (250), Expect = 9e-24
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 1355 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
+L EF + +V MF D +GD I F E++ + L RG E KL+
Sbjct: 39 TLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS--------LTDSQVTELIDGMFQDAG 1463
F + D DRNG ID+ EL +++ S+ ++ + S E++D +F
Sbjct: 99 WTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVD 158
Query: 1464 LDSKDFLTYQDFKLMMR 1480
+ L+ +F R
Sbjct: 159 ENGDGQLSLNEFVEGAR 175
Score = 85.6 bits (212), Expect = 9e-19
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 11/117 (9%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
+L EF + +V MF D +GD I F E++ + L RG E KL+
Sbjct: 39 TLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS--------LTDSQVTELIDGMFQ 1301
F + D DRNG ID+ EL +++ S+ ++ + S E++D +F
Sbjct: 99 WTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFL 155
Score = 82.9 bits (205), Expect = 9e-18
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
+L EF + +V MF D +GD I F E++ + L RG E KL+
Sbjct: 39 TLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLK 98
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
F + D DRNG ID+ EL +++ S+ ++
Sbjct: 99 WTFKIYDKDRNGCIDRQELLDIVESIYKL 127
Score = 55.6 bits (134), Expect = 2e-08
Identities = 24/176 (13%), Positives = 50/176 (28%), Gaps = 34/176 (19%)
Query: 1223 DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMA 1282
++ G + EF + + +F D + + ID E +
Sbjct: 33 EECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAA------LN 86
Query: 1283 RTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRR 1342
T + ++ R + + E L Y L +
Sbjct: 87 LVLRGTLEHKLKWTFKIYDKDRNGCIDRQE--------LLDIVESIYKLKKACSVEVEAE 138
Query: 1343 RDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
+ + + V +F +VD++GDG++S EF++
Sbjct: 139 QQGKLL--------------------TPEEVVDRIFLLVDENGDGQLSLNEFVEGA 174
Score = 45.2 bits (107), Expect = 6e-05
Identities = 9/53 (16%), Positives = 17/53 (32%)
Query: 80 DKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
++ G + EF + + +F D + + ID E L
Sbjct: 33 EECPSGTLFMHEFKRFFKVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAAL 85
Score = 38.6 bits (90), Expect = 0.008
Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 20/124 (16%)
Query: 1201 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVV----------------- 1240
E+ +AL + ++ F I DKD +G I QE LD V
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139
Query: 1241 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMF 1300
E+ + IF + D + +G + E E R + + + + + +
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQMDLNPSSWISQQRR 199
Query: 1301 QSPR 1304
+S
Sbjct: 200 KSAM 203
Score = 38.6 bits (90), Expect = 0.008
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 49 VMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 96
+ + E + + V +F +VD++GDG++S EF++
Sbjct: 127 LKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGA 174
Score = 38.6 bits (90), Expect = 0.008
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 23/104 (22%)
Query: 58 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVV----------------- 97
E+ +AL + ++ F I DKD +G I QE LD V
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139
Query: 98 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 138
E+ + IF + D + +G + E E R +++M
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKM 183
Score = 38.6 bits (90), Expect = 0.008
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 23/104 (22%)
Query: 1360 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVV----------------- 1399
E+ +AL + ++ F I DKD +G I QE LD V
Sbjct: 80 EYVAALNLVLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQ 139
Query: 1400 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR---SLVEM 1440
E+ + IF + D + +G + E E R +++M
Sbjct: 140 QGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKM 183
>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein
targeting, AKA beta-augmentation, calmodulin-binding,
membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B*
2p6b_B 1aui_B 1m63_B* 1tco_B*
Length = 155
Score = 98.5 bits (246), Expect = 1e-23
Identities = 40/127 (31%), Positives = 73/127 (57%), Gaps = 6/127 (4%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
SLS EF S ++ + V+ + +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 22 SLSVEEFMSLPELQQNP-LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 80
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D++G I GEL ++L+ +V +L D+Q+ +++D +A D ++++
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMVGN----NLKDTQLQQIVDKTIINADKDGDGRISFE 136
Query: 1474 DFKLMMR 1480
+F ++
Sbjct: 137 EFCAVVG 143
Score = 82.3 bits (204), Expect = 4e-18
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
SLS EF S ++ + V+ + +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 22 SLSVEEFMSLPELQQNP-LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 80
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
F + D D++G I GEL ++L+ +V +L D+Q+ +++D
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMVGN----NLKDTQLQQIVDKTII 123
Score = 71.9 bits (177), Expect = 2e-14
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
SLS EF S ++ + V+ + +I D DG+G + F+EF++ V FS +G E KLR
Sbjct: 22 SLSVEEFMSLPELQQNP-LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFA 80
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLV 136
F + D D++G I GEL ++L+ +V
Sbjct: 81 FRIYDMDKDGYISNGELFQVLKMMV 105
Score = 54.2 bits (131), Expect = 3e-08
Identities = 44/203 (21%), Positives = 65/203 (32%), Gaps = 68/203 (33%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
F +D D G +S +EF+ L R+I D+ D D NG +D E E
Sbjct: 11 RFKKLDLDNSGSLSVEEFMS---LPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEG--- 63
Query: 1278 LVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKP 1337
+++ + D +++KL FR Y +
Sbjct: 64 ---VSQFSVKGD---------------------------KEQKLRFAFR-IYDM------ 86
Query: 1338 GEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF--------VRMMFNIVDKDGDGRI 1389
D+ G +S E L M V DKDGDGRI
Sbjct: 87 -------DKDG------YISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRI 133
Query: 1390 SFQEFLDTVVLFSRGHTEDKLRI 1412
SF+EF + K+ +
Sbjct: 134 SFEEF---CAVVGGLDIHKKMVV 153
Score = 43.4 bits (103), Expect = 1e-04
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F +D D G +S +EF+ L R+I D+ D D NG +D E E +
Sbjct: 11 RFKKLDLDNSGSLSVEEFMS---LPELQQNPLVQRVI-DIFDTDGNGEVDFKEFIEGV 64
Score = 40.3 bits (95), Expect = 0.002
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 9/87 (10%)
Query: 58 EFASALGMKSDAVF----VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIF 112
EF + S +R F I D D DG IS E + + + + +L+ I
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 113 DM----CDNDRNGVIDKGELAEMLRSL 135
D D D +G I E ++ L
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVVGGL 145
Score = 40.3 bits (95), Expect = 0.002
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 9/87 (10%)
Query: 1201 EFASALGMKSDAVF----VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIF 1255
EF + S +R F I D D DG IS E + + + + +L+ I
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 1256 DM----CDNDRNGVIDKGELAEMLRSL 1278
D D D +G I E ++ L
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVVGGL 145
Score = 40.3 bits (95), Expect = 0.002
Identities = 22/87 (25%), Positives = 33/87 (37%), Gaps = 9/87 (10%)
Query: 1360 EFASALGMKSDAVF----VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIF 1414
EF + S +R F I D D DG IS E + + + + +L+ I
Sbjct: 59 EFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIV 118
Query: 1415 DM----CDNDRNGVIDKGELAEMLRSL 1437
D D D +G I E ++ L
Sbjct: 119 DKTIINADKDGDGRISFEEFCAVVGGL 145
Score = 38.0 bits (89), Expect = 0.009
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRI 110
V DKDGDGRISF+EF + K+ +
Sbjct: 118 VDKTIINADKDGDGRISFEEF---CAVVGGLDIHKKMVV 153
Score = 38.0 bits (89), Expect = 0.009
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRI 1253
V DKDGDGRISF+EF + K+ +
Sbjct: 118 VDKTIINADKDGDGRISFEEF---CAVVGGLDIHKKMVV 153
Score = 30.7 bits (70), Expect = 2.3
Identities = 9/71 (12%), Positives = 20/71 (28%), Gaps = 13/71 (18%)
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
+L F D D +G + E + L+ + D
Sbjct: 7 RLGKRFKKLDLDNSGSLSVEEFMSLPELQQN-------------PLVQRVIDIFDTDGNG 53
Query: 1469 FLTYQDFKLMM 1479
+ +++F +
Sbjct: 54 EVDFKEFIEGV 64
>2zfd_A Calcineurin B-like protein 2; calcium binding protein,
protein-protein complex, ATP-bindin kinase,
nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP:
a.39.1.5 PDB: 1uhn_A
Length = 226
Score = 100 bits (250), Expect = 1e-23
Identities = 27/130 (20%), Positives = 67/130 (51%), Gaps = 4/130 (3%)
Query: 1355 SLSRAEFASALGM--KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLR 1411
+++ EF AL K +++F +F++ D +G + F+EF + +F +DK+
Sbjct: 66 LINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIH 125
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLT 1471
F + D + G I++ E+ +M+ + + + +L D+ + ++ID F++A +
Sbjct: 126 FSFQLYDLKQQGFIERQEVKQMVVATLAESG-MNLKDTVIEDIIDKTFEEADTKHDGKID 184
Query: 1472 YQDFKLMMRD 1481
++++ ++
Sbjct: 185 KEEWRSLVLR 194
Score = 84.5 bits (209), Expect = 4e-18
Identities = 26/109 (23%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 1196 SLSRAEFASALGM--KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLR 1252
+++ EF AL K +++F +F++ D +G + F+EF + +F +DK+
Sbjct: 66 LINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIH 125
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
F + D + G I++ E+ +M+ + + + +L D+ + ++ID F+
Sbjct: 126 FSFQLYDLKQQGFIERQEVKQMVVATLAESG-MNLKDTVIEDIIDKTFE 173
Score = 75.6 bits (186), Expect = 4e-15
Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 3/106 (2%)
Query: 53 SLSRAEFASALGM--KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFS-RGHTEDKLR 109
+++ EF AL K +++F +F++ D +G + F+EF + +F +DK+
Sbjct: 66 LINKEEFQLALFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIH 125
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKI 155
F + D + G I++ E+ +M+ + + + + + K
Sbjct: 126 FSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKT 171
Score = 41.3 bits (97), Expect = 0.001
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 8/81 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRIIFDMCDNDRNGVI 1266
+ F + D G I QE VV ED + F+ D +G I
Sbjct: 124 IHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKI 183
Query: 1267 DKGELAEMLRSLVEMARTTSL 1287
DK E ++ + + +L
Sbjct: 184 DKEEWRSLVLRHPSLLKNMTL 204
Score = 41.3 bits (97), Expect = 0.001
Identities = 18/81 (22%), Positives = 28/81 (34%), Gaps = 8/81 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRIIFDMCDNDRNGVI 1425
+ F + D G I QE VV ED + F+ D +G I
Sbjct: 124 IHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKI 183
Query: 1426 DKGELAEMLRSLVEMARTTSL 1446
DK E ++ + + +L
Sbjct: 184 DKEEWRSLVLRHPSLLKNMTL 204
Score = 41.3 bits (97), Expect = 0.001
Identities = 17/70 (24%), Positives = 24/70 (34%), Gaps = 8/70 (11%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRIIFDMCDNDRNGVI 123
+ F + D G I QE VV ED + F+ D +G I
Sbjct: 124 IHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKI 183
Query: 124 DKGELAEMLR 133
DK E ++
Sbjct: 184 DKEEWRSLVL 193
Score = 37.1 bits (86), Expect = 0.032
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTV 96
+ F D DG+I +E+ V
Sbjct: 167 IIDKTFEEADTKHDGKIDKEEWRSLV 192
Score = 37.1 bits (86), Expect = 0.032
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTV 1239
+ F D DG+I +E+ V
Sbjct: 167 IIDKTFEEADTKHDGKIDKEEWRSLV 192
>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein
STR and functional analyses, riken structural
genomics/proteomi initiative; 2.20A {Homo sapiens} PDB:
2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A
2het_A
Length = 207
Score = 97.7 bits (243), Expect = 7e-23
Identities = 30/152 (19%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 1356 LSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
+++ +F S + + +F D + DG + F+E++ + + + G T KL
Sbjct: 51 ITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLE 110
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT-----DSQVTELIDGMFQDAGLDS 1466
F + D D NG I K E+ E++ ++ +M + ++ + + +++ G +
Sbjct: 111 WAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKND 170
Query: 1467 KDFLTYQDFKLMMRDYKGDFVAIGLDCKGAKQ 1498
D LT ++F K I + + K+
Sbjct: 171 DDKLTEKEFIEGTLANKEILRLIQFEPQKVKE 202
Score = 78.5 bits (193), Expect = 3e-16
Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 1197 LSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
+++ +F S + + +F D + DG + F+E++ + + + G T KL
Sbjct: 51 ITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLE 110
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT-----DSQVTELIDGMFQ 1301
F + D D NG I K E+ E++ ++ +M + ++ + + +++
Sbjct: 111 WAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWK 164
Score = 73.5 bits (180), Expect = 2e-14
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 54 LSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
+++ +F S + + +F D + DG + F+E++ + + + G T KL
Sbjct: 51 ITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLE 110
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
F + D D NG I K E+ E++ ++ +M
Sbjct: 111 WAFSLYDVDGNGTISKNEVLEIVMAIFKM 139
Score = 49.2 bits (117), Expect = 3e-06
Identities = 25/177 (14%), Positives = 54/177 (30%), Gaps = 38/177 (21%)
Query: 1223 DKDGDGRISFQEFLDTVVLFSRGHTEDKL-RIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281
GRI+ Q+F F + +F D++ +G +D E L
Sbjct: 44 KDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIAL------ 97
Query: 1282 ARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKR 1341
TT+ +Q E ++ ++K E + + + + +
Sbjct: 98 HMTTAGKTNQKLEWAFSLYDVDGNGTISKNE--------VLEIVMAIFKM-ITPEDVKLL 148
Query: 1342 RRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
D+ T E ++ K+ D +++ +EF++
Sbjct: 149 PDDENTPEKR----------------------AEKIWKYFGKNDDDKLTEKEFIEGT 183
Score = 38.0 bits (88), Expect = 0.016
Identities = 4/26 (15%), Positives = 13/26 (50%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTV 96
++ K+ D +++ +EF++
Sbjct: 158 RAEKIWKYFGKNDDDKLTEKEFIEGT 183
Score = 38.0 bits (88), Expect = 0.016
Identities = 4/26 (15%), Positives = 13/26 (50%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTV 1239
++ K+ D +++ +EF++
Sbjct: 158 RAEKIWKYFGKNDDDKLTEKEFIEGT 183
Score = 36.1 bits (83), Expect = 0.073
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 17/84 (20%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTV--------------VLFSRGHTEDKLRIIFDMCDN 117
+ F++ D DG+G IS E L+ V + E + I+
Sbjct: 109 LEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGK 168
Query: 118 DRNGVIDKGELAEMLR---SLVEM 138
+ + + + E E ++ +
Sbjct: 169 NDDDKLTEKEFIEGTLANKEILRL 192
Score = 36.1 bits (83), Expect = 0.073
Identities = 14/84 (16%), Positives = 29/84 (34%), Gaps = 17/84 (20%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTV--------------VLFSRGHTEDKLRIIFDMCDN 1260
+ F++ D DG+G IS E L+ V + E + I+
Sbjct: 109 LEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGK 168
Query: 1261 DRNGVIDKGELAEMLR---SLVEM 1281
+ + + + E E ++ +
Sbjct: 169 NDDDKLTEKEFIEGTLANKEILRL 192
Score = 35.7 bits (82), Expect = 0.094
Identities = 12/54 (22%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 80 DKDGDGRISFQEFLDTVVLFSRGHTEDKL-RIIFDMCDNDRNGVIDKGELAEML 132
GRI+ Q+F F + +F D++ +G +D E L
Sbjct: 44 KDCPTGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIAL 97
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR
{Homo sapiens} PDB: 2l4i_A 2lm5_A
Length = 214
Score = 95.3 bits (237), Expect = 6e-22
Identities = 25/126 (19%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRII 1413
+ + S +K++ F + + +SF++FLD + +FS + K
Sbjct: 76 VPFEQILSLPELKANP-FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYA 134
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D +G +++ +L+ ++ L T L+ S++ +LID + +++ +D +
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 1474 DFKLMM 1479
+F+ ++
Sbjct: 195 EFQHVI 200
Score = 79.5 bits (196), Expect = 2e-16
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRII 1254
+ + S +K++ F + + +SF++FLD + +FS + K
Sbjct: 76 VPFEQILSLPELKANP-FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYA 134
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
F + D D +G +++ +L+ ++ L T L+ S++ +LID + +
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILE 181
Score = 64.9 bits (158), Expect = 2e-11
Identities = 17/85 (20%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKD-GDGRISFQEFLDTVVLFS-RGHTEDKLRII 111
+ + S +K++ F + + +SF++FLD + +FS + K
Sbjct: 76 VPFEQILSLPELKANP-FKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYA 134
Query: 112 FDMCDNDRNGVIDKGELAEMLRSLV 136
F + D D +G +++ +L+ ++ L
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLT 159
Score = 39.5 bits (92), Expect = 0.006
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 58 EFASALGMKS----DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL----- 108
+F L + S + F I D D DG ++ ++ V + + +L
Sbjct: 113 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 172
Query: 109 ----RIIFDMCDNDRNGVIDKGELAEML 132
I + D DR+G I+ E ++
Sbjct: 173 KQLIDNILEESDIDRDGTINLSEFQHVI 200
Score = 39.5 bits (92), Expect = 0.006
Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 13/88 (14%)
Query: 1201 EFASALGMKS----DAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL----- 1251
+F L + S + F I D D DG ++ ++ V + + +L
Sbjct: 113 DFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEM 172
Query: 1252 ----RIIFDMCDNDRNGVIDKGELAEML 1275
I + D DR+G I+ E ++
Sbjct: 173 KQLIDNILEESDIDRDGTINLSEFQHVI 200
>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal
binding protein; NMR {Saccharomyces cerevisiae} SCOP:
a.39.1.5 PDB: 2ju0_A
Length = 190
Score = 94.5 bits (235), Expect = 6e-22
Identities = 31/133 (23%), Positives = 61/133 (45%), Gaps = 7/133 (5%)
Query: 1355 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
L+R +F S F +F + DKD +G I F+EF+ + SRG E+KL
Sbjct: 42 QLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL 101
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRSLVEM---ARTTSLTDSQVTELIDGMFQDAGLDSK 1467
F++ D + +G I E+ ++ S+ +M T + ++ + +F+ +
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNED 161
Query: 1468 DFLTYQDFKLMMR 1480
++T +F+ +
Sbjct: 162 GYITLDEFREGSK 174
Score = 81.1 bits (200), Expect = 3e-17
Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 7/113 (6%)
Query: 1196 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1251
L+R +F S F +F + DKD +G I F+EF+ + SRG E+KL
Sbjct: 42 QLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL 101
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRSLVEM---ARTTSLTDSQVTELIDGMFQ 1301
F++ D + +G I E+ ++ S+ +M T + ++ + +F+
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFK 154
Score = 74.5 bits (183), Expect = 5e-15
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 53 SLSRAEFASALGMK----SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 108
L+R +F S F +F + DKD +G I F+EF+ + SRG E+KL
Sbjct: 42 QLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKL 101
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
F++ D + +G I E+ ++ S+ +M + T V
Sbjct: 102 SWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRV 149
Score = 47.9 bits (114), Expect = 7e-06
Identities = 30/177 (16%), Positives = 56/177 (31%), Gaps = 40/177 (22%)
Query: 1223 DKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281
G+++ ++F+ F G ED +F + D D NG I E +L +
Sbjct: 36 RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTT--- 92
Query: 1282 ARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKR 1341
+R ++KL F + L
Sbjct: 93 -------------------------------SRGTLEEKLSWAFE-----LYDLNHDGYI 116
Query: 1342 RRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
D+ V + + + + V+ +F ++DK+ DG I+ EF +
Sbjct: 117 TFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGS 173
Score = 42.1 bits (99), Expect = 5e-04
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 31/185 (16%)
Query: 1282 ARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKL-------EHFFREAYALTFG 1334
A+T+ L+ +T L + RE+ + + F + Y F
Sbjct: 3 AKTSKLSKDDLTCLKQSTYFDRREIQQWH-----KGFLRDCPSGQLAREDFVKIYKQFFP 57
Query: 1335 -LKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNIVDKDGDGRIS 1390
P + + + EF + L S + F + D + DG I+
Sbjct: 58 FGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDGYIT 117
Query: 1391 FQEFLDTVVLF------------SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR--- 1435
F E L V E +++ IF + D + +G I E E +
Sbjct: 118 FDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDP 177
Query: 1436 SLVEM 1440
S++
Sbjct: 178 SIIGA 182
Score = 40.6 bits (95), Expect = 0.002
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%)
Query: 23 FREAYALTFG-LKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 78
F + Y F P + + + EF + L S + F +
Sbjct: 48 FVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFEL 107
Query: 79 VDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDMCDNDRNGVIDKG 126
D + DG I+F E L V E +++ IF + D + +G I
Sbjct: 108 YDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLD 167
Query: 127 ELAEMLR---SLVEM 138
E E + S++
Sbjct: 168 EFREGSKVDPSIIGA 182
Score = 40.6 bits (95), Expect = 0.002
Identities = 26/135 (19%), Positives = 44/135 (32%), Gaps = 19/135 (14%)
Query: 1166 FREAYALTFG-LKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVF---VRMMFNI 1221
F + Y F P + + + EF + L S + F +
Sbjct: 48 FVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFEL 107
Query: 1222 VDKDGDGRISFQEFLDTVVLF------------SRGHTEDKLRIIFDMCDNDRNGVIDKG 1269
D + DG I+F E L V E +++ IF + D + +G I
Sbjct: 108 YDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLD 167
Query: 1270 ELAEMLR---SLVEM 1281
E E + S++
Sbjct: 168 EFREGSKVDPSIIGA 182
Score = 33.3 bits (76), Expect = 0.44
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 80 DKDGDGRISFQEFLDTV-VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
G+++ ++F+ F G ED +F + D D NG I E +L +
Sbjct: 36 RDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTT 92
>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein,
calcium-binding protein, NHE1 regulating protein; 2.70A
{Homo sapiens}
Length = 202
Score = 93.3 bits (232), Expect = 2e-21
Identities = 28/143 (19%), Positives = 54/143 (37%), Gaps = 22/143 (15%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------- 1401
LSR + + + + DG R+ F F+ + F
Sbjct: 45 YLSRMDLQQIGALAVNP-LGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDP 103
Query: 1402 ----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1457
+KL F + D DR+G I + E+ ++LR +V + +T+ Q+ + D
Sbjct: 104 KKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV----QVTEEQLENIADR 159
Query: 1458 MFQDAGLDSKDFLTYQDFKLMMR 1480
Q+A D +++ +F +
Sbjct: 160 TVQEADEDGDGAVSFVEFTKSLE 182
Score = 77.1 bits (190), Expect = 9e-16
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 22/123 (17%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------- 1242
LSR + + + + DG R+ F F+ + F
Sbjct: 45 YLSRMDLQQIGALAVNP-LGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDP 103
Query: 1243 ----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
+KL F + D DR+G I + E+ ++LR +V + +T+ Q+ + D
Sbjct: 104 KKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV----QVTEEQLENIADR 159
Query: 1299 MFQ 1301
Q
Sbjct: 160 TVQ 162
Score = 66.3 bits (162), Expect = 4e-12
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 18/103 (17%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------- 99
LSR + + + + DG R+ F F+ + F
Sbjct: 45 YLSRMDLQQIGALAVNP-LGDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDP 103
Query: 100 ----SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
+KL F + D DR+G I + E+ ++LR +V +
Sbjct: 104 KKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146
Score = 54.4 bits (131), Expect = 5e-08
Identities = 37/205 (18%), Positives = 63/205 (30%), Gaps = 52/205 (25%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
F +D++ G +S + + + RII + D + +D +
Sbjct: 34 RFRALDRNKKGYLSRMDLQQ---IGALAVNPLGDRII-ESFFPDGSQRVDFPGFVRV--- 86
Query: 1278 LVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKP 1337
+A + D K E R+ KL + F+ Y L
Sbjct: 87 ---LAHFRPVEDEDTETQDPK-----------KPEPLNSRRNKLHYAFQL-YDL------ 125
Query: 1338 GEKRRRDDETGEVVMRTSLSRAEFASALGMK-----SDAVF---VRMMFNIVDKDGDGRI 1389
D G +SR E L + ++ D+DGDG +
Sbjct: 126 -------DRDG------KISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAV 172
Query: 1390 SFQEFLDTVVLFSRGHTEDKLRIIF 1414
SF EF ++ + E K+ I
Sbjct: 173 SFVEFTKSL---EKMDVEQKMSIRI 194
Score = 40.9 bits (96), Expect = 0.001
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDM----CDNDRNGVIDKGE 127
F + D D DG+IS E L + L TE++L I D D D +G + E
Sbjct: 117 HYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176
Query: 128 LAEMLRS 134
+ L
Sbjct: 177 FTKSLEK 183
Score = 40.9 bits (96), Expect = 0.001
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDM----CDNDRNGVIDKGE 1270
F + D D DG+IS E L + L TE++L I D D D +G + E
Sbjct: 117 HYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE 176
Query: 1271 LAEMLRS 1277
+ L
Sbjct: 177 FTKSLEK 183
Score = 37.4 bits (87), Expect = 0.021
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIF 112
D+DGDG +SF EF ++ + E K+ I
Sbjct: 157 ADRTVQEADEDGDGAVSFVEFTKSL---EKMDVEQKMSIRI 194
Score = 37.4 bits (87), Expect = 0.021
Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 3/41 (7%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIF 1255
D+DGDG +SF EF ++ + E K+ I
Sbjct: 157 ADRTVQEADEDGDGAVSFVEFTKSL---EKMDVEQKMSIRI 194
Score = 37.4 bits (87), Expect = 0.025
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 4/58 (6%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F +D++ G +S + + + RII + D + +D +L
Sbjct: 34 RFRALDRNKKGYLSRMDLQQ---IGALAVNPLGDRII-ESFFPDGSQRVDFPGFVRVL 87
>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A
{Rattus norvegicus} PDB: 2e30_A
Length = 208
Score = 93.7 bits (233), Expect = 2e-21
Identities = 28/142 (19%), Positives = 62/142 (43%), Gaps = 21/142 (14%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------- 1401
+LSR +F + + + N +G+ +++F+ F+ T+ F
Sbjct: 45 TLSREDFQRIPELAINP-LGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVN 103
Query: 1402 ---SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1458
+KL F + D D++ I + EL ++LR +V + +++D Q+ + D
Sbjct: 104 GPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV----NISDEQLGSIADRT 159
Query: 1459 FQDAGLDSKDFLTYQDFKLMMR 1480
Q+A D +++ +F ++
Sbjct: 160 IQEADQDGDSAISFTEFVKVLE 181
Score = 76.3 bits (188), Expect = 2e-15
Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------- 1242
+LSR +F + + + N +G+ +++F+ F+ T+ F
Sbjct: 45 TLSREDFQRIPELAINP-LGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVN 103
Query: 1243 ---SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1299
+KL F + D D++ I + EL ++LR +V + +++D Q+ + D
Sbjct: 104 GPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV----NISDEQLGSIADRT 159
Query: 1300 FQ 1301
Q
Sbjct: 160 IQ 161
Score = 66.3 bits (162), Expect = 4e-12
Identities = 21/102 (20%), Positives = 43/102 (42%), Gaps = 17/102 (16%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF------------- 99
+LSR +F + + + N +G+ +++F+ F+ T+ F
Sbjct: 45 TLSREDFQRIPELAINP-LGDRIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVN 103
Query: 100 ---SRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
+KL F + D D++ I + EL ++LR +V +
Sbjct: 104 GPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV 145
Score = 51.3 bits (123), Expect = 6e-07
Identities = 39/226 (17%), Positives = 72/226 (31%), Gaps = 60/226 (26%)
Query: 1181 KRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1240
RD+E E+ T S ++ + F +DK +G +S ++F +
Sbjct: 7 TLLRDEELEEIKKETGFSHSQITR----------LYSRFTSLDKGENGTLSREDFQ-RIP 55
Query: 1241 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMF 1300
+ D+ I + ++ ++ +A + D++ ++ ++G
Sbjct: 56 ELAINPLGDR---IINAFFSEGEDQVNFRGFMRT------LAHFRPIEDNEKSKDVNGP- 105
Query: 1301 QSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAE 1360
E R KL FR + L D+ + +SR E
Sbjct: 106 -----------EPLNSRSNKLHFAFR-----LYDL---------DKDDK------ISRDE 134
Query: 1361 FASALGMKSDAVF--------VRMMFNIVDKDGDGRISFQEFLDTV 1398
L M D+DGD ISF EF+ +
Sbjct: 135 LLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Score = 42.5 bits (100), Expect = 5e-04
Identities = 22/153 (14%), Positives = 48/153 (31%), Gaps = 21/153 (13%)
Query: 1340 KRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399
RD+E E+ T S ++ + F +DK +G +S ++F +
Sbjct: 7 TLLRDEELEEIKKETGFSHSQITR----------LYSRFTSLDKGENGTLSREDFQ-RIP 55
Query: 1400 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMF 1459
+ D+ I + ++ ++ L + D E ++
Sbjct: 56 ELAINPLGDR---IINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRS 112
Query: 1460 QDAG-------LDSKDFLTYQDFKLMMRDYKGD 1485
LD D ++ + ++R G
Sbjct: 113 NKLHFAFRLYDLDKDDKISRDELLQVLRMMVGV 145
Score = 42.5 bits (100), Expect = 5e-04
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRII----FDMCDNDRNGVIDKG 126
+ F + D D D +IS E L + + + ++++L I D D + I
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 127 ELAEMLRS 134
E ++L
Sbjct: 175 EFVKVLEK 182
Score = 42.5 bits (100), Expect = 5e-04
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRII----FDMCDNDRNGVIDKG 1269
+ F + D D D +IS E L + + + ++++L I D D + I
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 1270 ELAEMLRS 1277
E ++L
Sbjct: 175 EFVKVLEK 182
Score = 42.5 bits (100), Expect = 5e-04
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRII----FDMCDNDRNGVIDKG 1428
+ F + D D D +IS E L + + + ++++L I D D + I
Sbjct: 115 LHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFT 174
Query: 1429 ELAEMLRS 1436
E ++L
Sbjct: 175 EFVKVLEK 182
Score = 36.7 bits (85), Expect = 0.039
Identities = 25/120 (20%), Positives = 37/120 (30%), Gaps = 28/120 (23%)
Query: 1128 EGFLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDE 1187
GF+ + I + + + E R KL FR + L D+
Sbjct: 81 RGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFR-----LYDL---------DK 126
Query: 1188 TGEVVMRTSLSRAEFASALGMKSDAVF--------VRMMFNIVDKDGDGRISFQEFLDTV 1239
+ +SR E L M D+DGD ISF EF+ +
Sbjct: 127 DDK------ISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVL 180
Score = 36.7 bits (85), Expect = 0.048
Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 14/95 (14%)
Query: 38 KRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 97
RD+E E+ T S ++ + F +DK +G +S ++F +
Sbjct: 7 TLLRDEELEEIKKETGFSHSQITR----------LYSRFTSLDKGENGTLSREDFQ-RIP 55
Query: 98 LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ D+ I + ++ ++ L
Sbjct: 56 ELAINPLGDR---IINAFFSEGEDQVNFRGFMRTL 87
>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding
protein, CBP40, metal binding protein; 3.00A {Physarum
polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A
Length = 323
Score = 95.3 bits (237), Expect = 7e-21
Identities = 55/352 (15%), Positives = 107/352 (30%), Gaps = 77/352 (21%)
Query: 1149 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM 1208
A E R+R + ++ +E K E R R A+
Sbjct: 33 FAHKEDRDRLEAQIAQKEQE-------QKAKLAEYDQKVQNEFDARERAEREREAARGDA 85
Query: 1209 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK--LRIIFDMCDNDRNGVI 1266
++ + + ++ D G + + ED LR +F +G
Sbjct: 86 AAEKQRLASLLKDLEDDASGYNRLRPSKPML------SEEDTNILRQLFLSSAVSGSGKF 139
Query: 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELI-----DGM----FQSPRELMLAKAETRERR 1317
+L ++L ++ + + +L D + + +
Sbjct: 140 SFQDLKQVLAKY-----ADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDL------- 187
Query: 1318 QKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEFASAL---GMKSDAVF 1373
L FR D + G +LSR EF G +V
Sbjct: 188 -AALVADFR-----KI----------DTNSNG------TLSRKEFREHFVRLGFDKKSV- 224
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+F D+D + F E++ + LRI++ D D++G + K E+ ++
Sbjct: 225 QDALFRYADEDESDDVGFSEYVHLGL------CLLVLRILYAFADFDKSGQLSKEEVQKV 278
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGD 1485
L + + F +D L+YQ+F +++ D
Sbjct: 279 LEDA--------HIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMFHD 322
Score = 66.4 bits (162), Expect = 2e-11
Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 10/85 (11%)
Query: 54 LSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRI 110
LSR EF G +V +F D+D + F E++ + LRI
Sbjct: 205 LSRKEFREHFVRLGFDKKSV-QDALFRYADEDESDDVGFSEYVHLGL------CLLVLRI 257
Query: 111 IFDMCDNDRNGVIDKGELAEMLRSL 135
++ D D++G + K E+ ++L
Sbjct: 258 LYAFADFDKSGQLSKEEVQKVLEDA 282
Score = 58.3 bits (141), Expect = 9e-09
Identities = 16/86 (18%), Positives = 28/86 (32%), Gaps = 9/86 (10%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
S + L ++ +F +V+ D GR+S+ + L
Sbjct: 138 KFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVAN------DLAALV 191
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRSL 135
F D + NG + + E E L
Sbjct: 192 ADFRKIDTNSNGTLSRKEFREHFVRL 217
Score = 51.3 bits (123), Expect = 2e-06
Identities = 18/68 (26%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
R +F G G+ SFQ+ VL E L+ +F M +ND G + L
Sbjct: 125 RQLFLSSAVSGSGKFSFQDLKQ--VLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVA 182
Query: 131 MLRSLVEM 138
+ L +
Sbjct: 183 VANDLAAL 190
Score = 51.0 bits (122), Expect = 2e-06
Identities = 27/193 (13%), Positives = 61/193 (31%), Gaps = 24/193 (12%)
Query: 1291 QVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEV 1350
+V E ++ + + A E R+R + ++ +E K E
Sbjct: 16 KVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQE-------QKAKLAEYDQKVQNEF 68
Query: 1351 VMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK- 1409
R R A+ ++ + + ++ D G + + ED
Sbjct: 69 DARERAEREREAARGDAAAEKQRLASLLKDLEDDASGYNRLRPSKPML------SEEDTN 122
Query: 1410 -LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
LR +F +G +L ++L ++ + + + +F D+K
Sbjct: 123 ILRQLFLSSAVSGSGKFSFQDLKQVLAKY-----ADTIPEGPLKK----LFVMVENDTKG 173
Query: 1469 FLTYQDFKLMMRD 1481
++Y + D
Sbjct: 174 RMSYITLVAVAND 186
Score = 46.3 bits (110), Expect = 6e-05
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 12/80 (15%)
Query: 71 FVRMM---------FNIVDKDGDGRISFQEFLDTVVLFSRGHT-EDKLRIIFDMCDNDRN 120
V + F +D + +G +S +EF + G + +F D D +
Sbjct: 180 LVAVANDLAALVADFRKIDTNSNGTLSRKEFRE--HFVRLGFDKKSVQDALFRYADEDES 237
Query: 121 GVIDKGELAEMLRSLVEMAR 140
+ E + L+ +
Sbjct: 238 DDVGFSEYVHLGLCLLVLRI 257
Score = 42.9 bits (101), Expect = 8e-04
Identities = 10/66 (15%), Positives = 21/66 (31%), Gaps = 8/66 (12%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK--LRIIFDMCDNDRNGVIDKGELA 129
+ + ++ D G + + ED LR +F +G +L
Sbjct: 92 LASLLKDLEDDASGYNRLRPSKPML------SEEDTNILRQLFLSSAVSGSGKFSFQDLK 145
Query: 130 EMLRSL 135
++L
Sbjct: 146 QVLAKY 151
Score = 42.5 bits (100), Expect = 0.001
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 53 SLSRAEFASALGM----KSDAVFVRMMFNIVDKDGDGRISFQEFL 93
LS+ E L +S F++VD D +S+QEF+
Sbjct: 269 QLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFV 313
>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence,
southeast collabora structural genomics, secsg,
structural genomics, PSI; HET: CTZ; 1.72A {Renilla
muelleri} PDB: 2hq8_A
Length = 186
Score = 91.3 bits (227), Expect = 7e-21
Identities = 33/209 (15%), Positives = 72/209 (34%), Gaps = 35/209 (16%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307
K++ D +G I + + + + ++A+ ++ + + +
Sbjct: 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQ----- 67
Query: 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM 1367
GL PG + ++ V SL + +
Sbjct: 68 -------------------------LGLAPGVRISVEEA--AVNATDSLLKMKGEEKAMA 100
Query: 1368 KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDK 1427
+ +M++ +D D DG +S EF + T+DK F+ D ++NG I +
Sbjct: 101 VIQS---LIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR 157
Query: 1428 GELAEMLRSLVEMARTTSLTDSQVTELID 1456
E + + T+L ++ +L+D
Sbjct: 158 DEFLVTVNDFLFGLEETALANAFYGDLVD 186
Score = 73.6 bits (181), Expect = 1e-14
Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK 1250
V SL + + + +M++ +D D DG +S EF + T+DK
Sbjct: 83 VNATDSLLKMKGEEKAMAVIQS---LIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDK 139
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F+ D ++NG I + E + + T+L ++ +L+D
Sbjct: 140 AITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALANAFYGDLVD 186
Score = 72.1 bits (177), Expect = 3e-14
Identities = 20/145 (13%), Positives = 49/145 (33%), Gaps = 18/145 (12%)
Query: 1345 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1404
++ + +R +++ SA + + + + RIS +E
Sbjct: 34 EDYELIAVR--IAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLK 91
Query: 1405 -------HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1457
+ I++D D D++G + E L+++ LTD +
Sbjct: 92 MKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGP-----DLTDDKAIT---- 142
Query: 1458 MFQDAGLDSKDFLTYQDFKLMMRDY 1482
F + ++ +F + + D+
Sbjct: 143 CFNTLDFNKNGQISRDEFLVTVNDF 167
Score = 68.2 bits (167), Expect = 8e-13
Identities = 26/173 (15%), Positives = 49/173 (28%), Gaps = 35/173 (20%)
Query: 8 RRQLRERRQKKLEHFFR-------------------EAYALTFGLKPGEKRRRDDETGEV 48
R +K++ + A L + E V
Sbjct: 5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRV 64
Query: 49 VMR------TSLSRAEFASALGMK----------SDAVFVRMMFNIVDKDGDGRISFQEF 92
+ +S E A + +M++ +D D DG +S EF
Sbjct: 65 ADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEF 124
Query: 93 LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPS 145
+ T+DK F+ D ++NG I + E + + + +
Sbjct: 125 KAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVNDFLFGLEETALA 177
Score = 64.0 bits (156), Expect = 2e-11
Identities = 40/209 (19%), Positives = 60/209 (28%), Gaps = 63/209 (30%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRG---------HTEDKLRIIFDMCDNDRNGVI 1266
+ VD GDG IS +++ V ++ T + + D I
Sbjct: 17 KTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRI 76
Query: 1267 DKGE-LAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFF 1325
E SL++M K E + + +
Sbjct: 77 SVEEAAVNATDSLLKM----------------------------KGEEKAMAVIQSLIMY 108
Query: 1326 REAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIV 1381
D D+ G +S EF A+G FN +
Sbjct: 109 DCI---------------DTDKDG------YVSLPEFKAFLQAVGPDLTDDKAITCFNTL 147
Query: 1382 DKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
D + +G+IS EFL TV F G E L
Sbjct: 148 DFNKNGQISRDEFLVTVNDFLFGLEETAL 176
Score = 60.5 bits (147), Expect = 3e-10
Identities = 17/119 (14%), Positives = 40/119 (33%), Gaps = 14/119 (11%)
Query: 1186 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1245
++ + +R +++ SA + + + + RIS +E
Sbjct: 34 EDYELIAVR--IAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVNATDSLLK 91
Query: 1246 -------HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ I++D D D++G + E L+++ LTD + +
Sbjct: 92 MKGEEKAMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGP-----DLTDDKAITCFN 145
Score = 53.2 bits (128), Expect = 1e-07
Identities = 8/75 (10%), Positives = 28/75 (37%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
K++ D +G I + + + + ++A+ ++ + + + GL
Sbjct: 13 LRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAP 72
Query: 1467 KDFLTYQDFKLMMRD 1481
++ ++ + D
Sbjct: 73 GVRISVEEAAVNATD 87
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding,
EF-hand superfamily, S genomics, protein structure
initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Length = 272
Score = 92.4 bits (229), Expect = 2e-20
Identities = 37/266 (13%), Positives = 85/266 (31%), Gaps = 41/266 (15%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPREL 1306
I+ D D NG I+ EL + R +++ + ++ D Q ++
Sbjct: 9 DAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKD-------KITDERVQQIKKS 61
Query: 1307 MLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT----------SL 1356
++ + + ++E +R + M+ +
Sbjct: 62 FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRKYDADSSGYI 121
Query: 1357 SRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVL----- 1400
S AE + L + M I DK+ DGR+ + + L
Sbjct: 122 SAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFL 181
Query: 1401 -------FSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1453
S+ + IF D R G ++ E+ ++ ++E+ R S++ + +
Sbjct: 182 LQFKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVR-PSISGGDLDK 240
Query: 1454 LIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+ + ++ + + L +
Sbjct: 241 FRECLLTHCDMNKDGKIQKSELALCL 266
Score = 76.6 bits (188), Expect = 4e-15
Identities = 30/233 (12%), Positives = 63/233 (27%), Gaps = 32/233 (13%)
Query: 1190 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT-- 1247
+ R L + + + + + + D DGR+ +E + ++
Sbjct: 34 DDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLI 93
Query: 1248 ---------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
+ I+ D D +G I EL L+ L + +++ E D
Sbjct: 94 FRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQH-KKKIPPNKLDEYTDA 152
Query: 1299 MFQS--------------PRELMLAKAETRERRQKKLEHFFREAYALTFGL---KPGEKR 1341
M + R L L + + + R+
Sbjct: 153 MMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGA 212
Query: 1342 RRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF 1394
E ++ + ++ F + D + DG+I E
Sbjct: 213 LEGPEVDGF-VKDMMELVR--PSISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262
Score = 73.6 bits (180), Expect = 6e-14
Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 12/143 (8%)
Query: 1349 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT-- 1406
+ R L + + + + + + D DGR+ +E + ++
Sbjct: 34 DDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLI 93
Query: 1407 ---------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1457
+ I+ D D +G I EL L+ L + +++ E D
Sbjct: 94 FRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQH-KKKIPPNKLDEYTDA 152
Query: 1458 MFQDAGLDSKDFLTYQDFKLMMR 1480
M + + L D ++
Sbjct: 153 MMKIFDKNKDGRLDLNDLARILA 175
Score = 52.8 bits (126), Expect = 4e-07
Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 12/85 (14%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVL------------FSRGHTEDKLRIIFDMCDND 118
+ M I DK+ DGR+ + + L S+ + IF D
Sbjct: 149 YTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVS 208
Query: 119 RNGVIDKGELAEMLRSLVEMARTSF 143
R G ++ E+ ++ ++E+ R S
Sbjct: 209 RTGALEGPEVDGFVKDMMELVRPSI 233
Score = 52.4 bits (125), Expect = 5e-07
Identities = 16/108 (14%), Positives = 33/108 (30%), Gaps = 11/108 (10%)
Query: 47 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT-- 104
+ R L + + + + + + D DGR+ +E + ++
Sbjct: 34 DDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLI 93
Query: 105 ---------EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSF 143
+ I+ D D +G I EL L+ L +
Sbjct: 94 FRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKI 141
Score = 47.4 bits (112), Expect = 2e-05
Identities = 15/84 (17%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT-SLTDSQVTELIDGMFQDAGL 1464
I+ D D NG I+ EL + R +++ + +TD +V ++
Sbjct: 9 DAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDA 68
Query: 1465 DSKDFLTYQDFKLMMRDYKGDFVA 1488
L ++ M+ + +F+
Sbjct: 69 TFDGRLQIEELANMILPQEENFLL 92
Score = 41.6 bits (97), Expect = 0.001
Identities = 16/69 (23%), Positives = 23/69 (33%), Gaps = 8/69 (11%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTV--------VLFSRGHTEDKLRIIFDMCDNDRNGVI 123
+F D G + E V S G + + CD +++G I
Sbjct: 198 FEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKI 257
Query: 124 DKGELAEML 132
K ELA L
Sbjct: 258 QKSELALCL 266
Score = 40.8 bits (95), Expect = 0.003
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 8/70 (11%)
Query: 72 VRMMFNIVDKDGDGRISFQEF--------LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 123
++ D D G IS E L ++ + + D +++G +
Sbjct: 106 FMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRL 165
Query: 124 DKGELAEMLR 133
D +LA +L
Sbjct: 166 DLNDLARILA 175
Score = 40.8 bits (95), Expect = 0.003
Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 3/122 (2%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV-EMARTSFPSGGAATTVVKIVLRGYYS 162
I+ D D NG I+ EL + R ++ ++ + + K + Y +
Sbjct: 9 DAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDA 68
Query: 163 YGNSLDNIDLYIGGMLESHEGPGPLFTNI-ILEQFTRLRDADRFWFENTENGMFTAAEVE 221
+ I+ +L E +F L+ R ++ +G +AAE++
Sbjct: 69 TFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMKIWRK-YDADSSGYISAAELK 127
Query: 222 AI 223
Sbjct: 128 NF 129
Score = 40.4 bits (94), Expect = 0.004
Identities = 15/76 (19%), Positives = 25/76 (32%), Gaps = 12/76 (15%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTV---VLFSRGHTE--------DKLRIIFDMCDNDRNG 121
++ D D +G I +E LD +L + + D +G
Sbjct: 14 LQIWQHFDADDNGYIEGKE-LDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDG 72
Query: 122 VIDKGELAEMLRSLVE 137
+ ELA M+ E
Sbjct: 73 RLQIEELANMILPQEE 88
Score = 37.7 bits (87), Expect = 0.025
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 63 LGMKSDAVFVRMMFNIVDKDGDGRISFQEF 92
+ F + D + DG+I E
Sbjct: 233 ISGGDLDKFRECLLTHCDMNKDGKIQKSEL 262
>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus
norvegicus} PDB: 2g9b_A
Length = 263
Score = 86.1 bits (213), Expect = 2e-18
Identities = 42/268 (15%), Positives = 84/268 (31%), Gaps = 56/268 (20%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSL-TDSQVTELIDGM------ 1299
T + I+ D D +G ++ EL +++ L++ + L ++ +D
Sbjct: 14 TASQFFEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDG 73
Query: 1300 ---FQSPRELMLAKAE---TRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVM 1352
++ + +Q K F + + R+ D D +G
Sbjct: 74 KIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTW-----------RKYDTDHSG---- 118
Query: 1353 RTSLSRAEFASA---LGMKSDAVF--------VRMMFNIVDKDGDGRISFQEFL------ 1395
+ E + L K++ +M + D + DG++ E
Sbjct: 119 --FIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQ 176
Query: 1396 --DTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1453
+ + F++ D D NG ID+ EL +L+ L E
Sbjct: 177 ENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALLKDLCE-----KNKQELDIN 231
Query: 1454 LIDGMFQDAGLDSKD-FLTYQDFKLMMR 1480
I ++ S L D L++
Sbjct: 232 NISTYKKNIMALSDGGKLYRTDLALILS 259
Score = 76.1 bits (187), Expect = 6e-15
Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 53/238 (22%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLF---------SRGHTEDKLRIIFDMCDNDRNGV 1265
++ + + DG+I E + + + ++ + D D +G
Sbjct: 60 MKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGF 119
Query: 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFF 1325
I+ EL L+ L+E A ++ D+++ E D M + ++ + +L
Sbjct: 120 IETEELKNFLKDLLEKA-NKTVDDTKLAEYTDLMLK--------LFDSNNDGKLELTEMA 170
Query: 1326 REAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDG 1385
R L K + G+ EF F + D+DG
Sbjct: 171 R---LLPVQENFLLKFQGIKMCGK----------EF-------------NKAFELYDQDG 204
Query: 1386 DGRISFQEFLDTVVLFSRGHT-------EDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+G I E +L + ++ G + + +LA +L +
Sbjct: 205 NGYIDENELDA--LLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALILSA 260
Score = 61.4 bits (149), Expect = 6e-10
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 13/97 (13%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFL--------DTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1265
+ +M + D + DG++ E + + F++ D D NG
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQS 1302
ID+ EL +L+ L E I ++
Sbjct: 208 IDENELDALLKDLCE-----KNKQELDINNISTYKKN 239
Score = 60.3 bits (146), Expect = 1e-09
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFL--------DTVVLFSRGHTEDKLRIIFDMCDNDRNGV 122
+ +M + D + DG++ E + + F++ D D NG
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 123 IDKGELAEMLRSLVE 137
ID+ EL +L+ L E
Sbjct: 208 IDENELDALLKDLCE 222
Score = 55.3 bits (133), Expect = 5e-08
Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLF---------SRGHTEDKLRIIFDMCDNDRNGV 122
++ + + DG+I E + + + ++ + D D +G
Sbjct: 60 MKTFVDQYGQRDDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMKTWRKYDTDHSGF 119
Query: 123 IDKGELAEMLRSLVE 137
I+ EL L+ L+E
Sbjct: 120 IETEELKNFLKDLLE 134
Score = 47.6 bits (113), Expect = 2e-05
Identities = 10/97 (10%), Positives = 33/97 (34%), Gaps = 3/97 (3%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
T + I+ D D +G ++ EL +++ L++ +++ + G
Sbjct: 14 TASQFFEIWLHFDADGSGYLEGKELQNLIQELLQAR---KKAGLELSPEMKTFVDQYGQR 70
Query: 1466 SKDFLTYQDFKLMMRDYKGDFVAIGLDCKGAKQNFLD 1502
+ + ++ + + + + F+
Sbjct: 71 DDGKIGIVELAHVLPTEENFLLLFRCQQLKSCEEFMK 107
Score = 40.6 bits (95), Expect = 0.003
Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 73 RMMFNIVDKDGDGRISFQEF------LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKG 126
++ D DG G + +E L + +++ D +G I
Sbjct: 19 FEIWLHFDADGSGYLEGKELQNLIQELLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIV 78
Query: 127 ELAEML 132
ELA +L
Sbjct: 79 ELAHVL 84
Score = 40.6 bits (95), Expect = 0.003
Identities = 12/69 (17%), Positives = 24/69 (34%), Gaps = 9/69 (13%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT-------EDKLRIIFDMCDNDRNGVIDK 125
F + D+DG+G I E +L + ++ G + +
Sbjct: 194 NKAFELYDQDGNGYIDENELDA--LLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYR 251
Query: 126 GELAEMLRS 134
+LA +L +
Sbjct: 252 TDLALILSA 260
Score = 37.2 bits (86), Expect = 0.036
Identities = 8/32 (25%), Positives = 16/32 (50%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
T + I+ D D +G ++ EL +++ L
Sbjct: 14 TASQFFEIWLHFDADGSGYLEGKELQNLIQEL 45
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A
{Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB:
1eg4_A
Length = 261
Score = 82.8 bits (204), Expect = 3e-17
Identities = 24/116 (20%), Positives = 42/116 (36%), Gaps = 8/116 (6%)
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ + + N+ D GRI F ++ + H EDK R +F G D+ L
Sbjct: 131 DMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRL 189
Query: 1431 AEMLRSLVEMAR----TTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMMRD 1481
+L +++ R S S + + FQ A + + F M +
Sbjct: 190 GLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFANNKPE--IEAALFLDWMRLE 243
Score = 77.4 bits (190), Expect = 2e-15
Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 5/94 (5%)
Query: 1212 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
+ + + N+ D GRI F ++ + H EDK R +F G D+ L
Sbjct: 131 DMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRL 189
Query: 1272 AEMLRSLVEMAR----TTSLTDSQVTELIDGMFQ 1301
+L +++ R S S + + FQ
Sbjct: 190 GLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQ 223
Score = 71.3 bits (174), Expect = 3e-13
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 69 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
+ + + N+ D GRI F ++ + H EDK R +F G D+ L
Sbjct: 131 DMCLNWLLNVYDTGRTGRIRVLSFKTGIISLCKAHLEDKYRYLFKQVA-SSTGFCDQRRL 189
Query: 129 AEMLRSLVEMAR 140
+L +++ R
Sbjct: 190 GLLLHDSIQIPR 201
>3li6_A Calcium-binding protein; calcium signaling protein, assemble free
energy, dynamic behaviour, cytoskeleton, metal binding;
2.50A {Entamoeba histolytica}
Length = 66
Score = 74.9 bits (185), Expect = 1e-16
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 132 LRSL 135
S+
Sbjct: 62 YGSI 65
Score = 74.9 bits (185), Expect = 1e-16
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 1275 LRSL 1278
S+
Sbjct: 62 YGSI 65
Score = 74.9 bits (185), Expect = 1e-16
Identities = 21/64 (32%), Positives = 32/64 (50%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+F +D +GDG +S++E V E L++IF D D NG ID+ E A+
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Query: 1434 LRSL 1437
S+
Sbjct: 62 YGSI 65
Score = 41.0 bits (97), Expect = 1e-04
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
++S E + + + ++++F +D DG+G I EF
Sbjct: 16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Score = 41.0 bits (97), Expect = 1e-04
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
++S E + + + ++++F +D DG+G I EF
Sbjct: 16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
Score = 41.0 bits (97), Expect = 1e-04
Identities = 10/45 (22%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 1355 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
++S E + + + ++++F +D DG+G I EF
Sbjct: 16 AVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora
erythraea} SCOP: a.39.1.5
Length = 176
Score = 78.3 bits (193), Expect = 2e-16
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 19/124 (15%)
Query: 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK--------LRIIFDMCD 1418
+ + DG ++ ++F+ E ++ I MCD
Sbjct: 53 KNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCD 112
Query: 1419 NDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLM 1478
+ +G I+ E A L +L ++ ++ E F + L+ +
Sbjct: 113 KNADGQINADEFAAWLTAL-------GMSKAEAAE----AFNQVDTNGNGELSLDELLTA 161
Query: 1479 MRDY 1482
+RD+
Sbjct: 162 VRDF 165
Score = 67.5 bits (165), Expect = 1e-12
Identities = 39/173 (22%), Positives = 65/173 (37%), Gaps = 14/173 (8%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307
D+L+ FD D D NG +++ + + + + E A ++V L + + +
Sbjct: 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAE-AFGKDAGAAEVQTLKNAF-GGLFDYL 63
Query: 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT-------SLSRAE 1360
+A E F R L F R + ++ ++ E
Sbjct: 64 AKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADE 123
Query: 1361 FA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1410
FA +ALGM FN VD +G+G +S E L V F G + +L
Sbjct: 124 FAAWLTALGMSKAEA--AEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVEL 174
Score = 63.2 bits (154), Expect = 3e-11
Identities = 15/100 (15%), Positives = 34/100 (34%), Gaps = 15/100 (15%)
Query: 1208 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK--------LRIIFDMCD 1259
+ + DG ++ ++F+ E ++ I MCD
Sbjct: 53 KNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCD 112
Query: 1260 NDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1299
+ +G I+ E A L +L ++ ++ E + +
Sbjct: 113 KNADGQINADEFAAWLTAL-------GMSKAEAAEAFNQV 145
Score = 61.7 bits (150), Expect = 9e-11
Identities = 14/79 (17%), Positives = 27/79 (34%), Gaps = 8/79 (10%)
Query: 65 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK--------LRIIFDMCD 116
+ + DG ++ ++F+ E ++ I MCD
Sbjct: 53 KNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCD 112
Query: 117 NDRNGVIDKGELAEMLRSL 135
+ +G I+ E A L +L
Sbjct: 113 KNADGQINADEFAAWLTAL 131
Score = 56.7 bits (137), Expect = 5e-09
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
V+ + + DK+ DG+I+ EF L + G ++ + F+ D + NG + EL
Sbjct: 103 VVKGIVGMCDKNADGQINADEF--AAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLT 160
Query: 131 MLR 133
+R
Sbjct: 161 AVR 163
Score = 56.7 bits (137), Expect = 5e-09
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
V+ + + DK+ DG+I+ EF L + G ++ + F+ D + NG + EL
Sbjct: 103 VVKGIVGMCDKNADGQINADEF--AAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLT 160
Query: 1274 MLR 1276
+R
Sbjct: 161 AVR 163
Score = 48.6 bits (116), Expect = 3e-06
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID-------GMF 1459
D+L+ FD D D NG +++ + + + + E A ++V L + +
Sbjct: 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAE-AFGKDAGAAEVQTLKNAFGGLFDYLA 64
Query: 1460 QDAGLDSKDFLTYQDFKLMMRD 1481
++AG+ S LT + F + +
Sbjct: 65 KEAGVGSDGSLTEEQFIRVTEN 86
Score = 43.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 53 SLSRAEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 108
++ EFA +ALGM FN VD +G+G +S E L V F G + +L
Sbjct: 118 QINADEFAAWLTALGMSKAEA--AEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVEL 174
Score = 43.2 bits (102), Expect = 2e-04
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 1196 SLSRAEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL 1251
++ EFA +ALGM FN VD +G+G +S E L V F G + +L
Sbjct: 118 QINADEFAAWLTALGMSKAEA--AEAFNQVDTNGNGELSLDELLTAVRDFHFGRLDVEL 174
Score = 40.1 bits (94), Expect = 0.002
Identities = 9/81 (11%), Positives = 27/81 (33%), Gaps = 15/81 (18%)
Query: 75 MFNIVDKDGDGRISFQEFLDTV--VLFSRGH--TEDKLRIIFDMC-----------DNDR 119
F+ D DG+G + +F + + G +++ + +
Sbjct: 12 RFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGS 71
Query: 120 NGVIDKGELAEMLRSLVEMAR 140
+G + + + + +L+
Sbjct: 72 DGSLTEEQFIRVTENLIFEQG 92
Score = 36.7 bits (85), Expect = 0.031
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
D+L+ FD D D NG +++ + + + + E
Sbjct: 6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEA 39
>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding
protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB:
2scp_A
Length = 174
Score = 76.3 bits (188), Expect = 8e-16
Identities = 23/196 (11%), Positives = 49/196 (25%), Gaps = 53/196 (27%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307
K++ F+ D D++G I + + M + + + L+D +
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKES---EMKAEHAKVLMDSLTGVWDNF- 60
Query: 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM 1367
+ F +++
Sbjct: 61 ---------------------------------LTAVAGGKGI------DETTFINSMKE 81
Query: 1368 KSDA--------VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN 1419
+ + F VD + D IS E+ + G + FD D
Sbjct: 82 MVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY--GIFFGMLGLDKTMAPASFDAIDT 139
Query: 1420 DRNGVIDKGELAEMLR 1435
+ +G++ E
Sbjct: 140 NNDGLLSLEEFVIAGS 155
Score = 69.4 bits (170), Expect = 2e-13
Identities = 17/140 (12%), Positives = 39/140 (27%), Gaps = 17/140 (12%)
Query: 1349 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIV-DKDGDGRISFQEFLDTVVLFSRGHTE 1407
E + +E + + N + G I F++++ +
Sbjct: 29 ESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEA 88
Query: 1408 DK-----LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
L + F D + + I + E L L + F
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-------GLDKTMAPA----SFDAI 137
Query: 1463 GLDSKDFLTYQDFKLMMRDY 1482
++ L+ ++F + D+
Sbjct: 138 DTNNDGLLSLEEFVIAGSDF 157
Score = 60.9 bits (148), Expect = 2e-10
Identities = 30/193 (15%), Positives = 56/193 (29%), Gaps = 63/193 (32%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTV--VLFSRGHTEDKLRIIFDMC---------DNDRNG 1264
+ FN +D D DG I+ +F + +++ D
Sbjct: 9 KTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGK 68
Query: 1265 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHF 1324
ID+ ++ +V+ + + L F
Sbjct: 69 GIDETTFINSMKEMVKNPE-----------------------------AKSVVEGPLPLF 99
Query: 1325 FREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEFASALG-MKSDAVFVRMMFNIVD 1382
FR D +E ++SR E+ G + D F+ +D
Sbjct: 100 FRAV---------------DTNEDN------NISRDEYGIFFGMLGLDKTMAPASFDAID 138
Query: 1383 KDGDGRISFQEFL 1395
+ DG +S +EF+
Sbjct: 139 TNNDGLLSLEEFV 151
Score = 57.8 bits (140), Expect = 2e-09
Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 53 SLSRAEFASALGMKSDA--------VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT 104
+ F +++ + + F VD + D IS E+ + G
Sbjct: 69 GIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY--GIFFGMLGLD 126
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
+ FD D + +G++ E
Sbjct: 127 KTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
Score = 57.8 bits (140), Expect = 2e-09
Identities = 14/89 (15%), Positives = 28/89 (31%), Gaps = 10/89 (11%)
Query: 1196 SLSRAEFASALGMKSDA--------VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHT 1247
+ F +++ + + F VD + D IS E+ + G
Sbjct: 69 GIDETTFINSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEY--GIFFGMLGLD 126
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
+ FD D + +G++ E
Sbjct: 127 KTMAPASFDAIDTNNDGLLSLEEFVIAGS 155
Score = 54.3 bits (131), Expect = 3e-08
Identities = 14/116 (12%), Positives = 30/116 (25%), Gaps = 13/116 (11%)
Query: 1190 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIV-DKDGDGRISFQEFLDTVVLFSRGHTE 1248
E + +E + + N + G I F++++ +
Sbjct: 29 ESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEA 88
Query: 1249 DK-----LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1299
L + F D + + I + E L L + D +
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML-------GLDKTMAPASFDAI 137
Score = 52.8 bits (127), Expect = 9e-08
Identities = 12/95 (12%), Positives = 26/95 (27%), Gaps = 6/95 (6%)
Query: 47 EVVMRTSLSRAEFASALGMKSDAVFVRMMFNIV-DKDGDGRISFQEFLDTVVLFSRGHTE 105
E + +E + + N + G I F++++ +
Sbjct: 29 ESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVKNPEA 88
Query: 106 DK-----LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
L + F D + + I + E L
Sbjct: 89 KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGML 123
Score = 48.6 bits (116), Expect = 3e-06
Identities = 10/81 (12%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQD--AGL 1464
K++ F+ D D++G I + + M + + + + + + G++ + +
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAV 64
Query: 1465 DSKDFLTYQDFKLMMRDYKGD 1485
+ F M++ +
Sbjct: 65 AGGKGIDETTFINSMKEMVKN 85
Score = 42.4 bits (100), Expect = 3e-04
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 11/79 (13%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTV--VLFSRGHTEDKLRIIFDMC---------DNDRNG 121
+ FN +D D DG I+ +F + +++ D
Sbjct: 9 KTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGK 68
Query: 122 VIDKGELAEMLRSLVEMAR 140
ID+ ++ +V+
Sbjct: 69 GIDETTFINSMKEMVKNPE 87
Score = 38.2 bits (89), Expect = 0.010
Identities = 7/42 (16%), Positives = 16/42 (38%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSG 146
K++ F+ D D++G I + + M + +
Sbjct: 5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHA 46
>3akb_A Putative calcium binding protein; EF-hand, metal binding protein;
1.50A {Streptomyces coelicolor} PDB: 3aka_A
Length = 166
Score = 75.9 bits (187), Expect = 9e-16
Identities = 19/117 (16%), Positives = 36/117 (30%), Gaps = 18/117 (15%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK-------LRIIFDMCDNDRNGVI 1425
+ + I D+DGD RI+ +EF+ V R + L + D D +G +
Sbjct: 56 LWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAV 115
Query: 1426 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482
+ A L + + + + D + + Y
Sbjct: 116 TVADTARALTAF-------GVPEDLARQ----AAAALDTDGDGKVGETEIVPAFARY 161
Score = 75.2 bits (185), Expect = 2e-15
Identities = 31/198 (15%), Positives = 57/198 (28%), Gaps = 51/198 (25%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307
E ++ F D D NG ID+ + + ++++ + + L G + L
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLA-EFGVAARSDRGQALYGGAEALWQGLA 61
Query: 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGM 1367
A D + +R EF +
Sbjct: 62 ------------------GIADR--------------DGDQRI------TREEFVTGAVK 83
Query: 1368 KSD----------AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1417
+ F+ + D DGDG ++ + L + G ED R
Sbjct: 84 RLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADT--ARALTAFGVPEDLARQAAAAL 141
Query: 1418 DNDRNGVIDKGELAEMLR 1435
D D +G + + E+
Sbjct: 142 DTDGDGKVGETEIVPAFA 159
Score = 60.9 bits (148), Expect = 2e-10
Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 14/91 (15%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK-------LRIIFDMCDNDRNGVI 1266
+ + I D+DGD RI+ +EF+ V R + L + D D +G +
Sbjct: 56 LWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAV 115
Query: 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ A L + + + +
Sbjct: 116 TVADTARALTAF-------GVPEDLARQAAA 139
Score = 59.8 bits (145), Expect = 4e-10
Identities = 32/199 (16%), Positives = 56/199 (28%), Gaps = 69/199 (34%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTV--VLFSRGHTEDK-------------LRIIFDMCDN 1260
F D+DG+G I +F +L G + + + D
Sbjct: 7 AARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADR 66
Query: 1261 DRNGVIDKGE-LAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQK 1319
D + I + E + ++ L + +R +
Sbjct: 67 DGDQRITREEFVTGAVKRL--------------------------------RDKPDRFAE 94
Query: 1320 KLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFA---SALGMKSDAVFVRM 1376
F A + D G V + A+ A +A G+ D R
Sbjct: 95 MARPFLHAALGV-AD---------TDGDGAV------TVADTARALTAFGVPEDL--ARQ 136
Query: 1377 MFNIVDKDGDGRISFQEFL 1395
+D DGDG++ E +
Sbjct: 137 AAAALDTDGDGKVGETEIV 155
Score = 58.6 bits (142), Expect = 8e-10
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK-------LRIIFDMCDNDRNGVI 123
+ + I D+DGD RI+ +EF+ V R + L + D D +G +
Sbjct: 56 LWQGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAV 115
Query: 124 DKGELAEMLRSL 135
+ A L +
Sbjct: 116 TVADTARALTAF 127
Score = 56.7 bits (137), Expect = 4e-09
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
F+ + D DGDG ++ + L + G ED R D D +G + + E+
Sbjct: 99 FLHAALGVADTDGDGAVTVADT--ARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVP 156
Query: 131 MLR 133
Sbjct: 157 AFA 159
Score = 56.7 bits (137), Expect = 4e-09
Identities = 15/63 (23%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F+ + D DGDG ++ + L + G ED R D D +G + + E+
Sbjct: 99 FLHAALGVADTDGDGAVTVADT--ARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVP 156
Query: 1274 MLR 1276
Sbjct: 157 AFA 159
Score = 48.6 bits (116), Expect = 3e-06
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 6/85 (7%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD------SQVTELIDGMFQ 1460
E ++ F D D NG ID+ + + ++++ + +D L G+
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 1461 DAGLDSKDFLTYQDFKLMMRDYKGD 1485
A D +T ++F D
Sbjct: 63 IADRDGDQRITREEFVTGAVKRLRD 87
Score = 42.8 bits (101), Expect = 3e-04
Identities = 21/110 (19%), Positives = 34/110 (30%), Gaps = 34/110 (30%)
Query: 1130 FLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETG 1189
F+ K L + +R + F A + D G
Sbjct: 77 FVTGAVKRL-------------RDKPDRFAEMARPFLHAALGV-AD---------TDGDG 113
Query: 1190 EVVMRTSLSRAEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
V + A+ A +A G+ D R +D DGDG++ E +
Sbjct: 114 AV------TVADTARALTAFGVPEDLA--RQAAAALDTDGDGKVGETEIV 155
Score = 42.4 bits (100), Expect = 4e-04
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Query: 53 SLSRAEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+++ A+ A +A G+ D R +D DGDG++ E +
Sbjct: 114 AVTVADTARALTAFGVPEDLA--RQAAAALDTDGDGKVGETEIV 155
Score = 39.7 bits (93), Expect = 0.002
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 16/81 (19%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTV--VLFSRGHTEDK-------------LRIIFDMCDN 117
F D+DG+G I +F +L G + + + D
Sbjct: 7 AARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADR 66
Query: 118 DRNGVIDKGE-LAEMLRSLVE 137
D + I + E + ++ L +
Sbjct: 67 DGDQRITREEFVTGAVKRLRD 87
Score = 38.6 bits (90), Expect = 0.006
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
E ++ F D D NG ID+ + + ++++
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLA 35
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase
structural genomics malaria, structural genom consortium,
SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB:
3o4y_A
Length = 191
Score = 76.1 bits (188), Expect = 1e-15
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++ + +D DG G+I + EF+ L + ++ + F + D D +G I ELA +
Sbjct: 89 FDLLLDQIDSDGSGKIDYTEFI-AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHI 147
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
L + + T + M +D ++ + + +F MM+
Sbjct: 148 LYNGNKKGNITQRDV----NRVKRMIRDVDKNNDGKIDFHEFSEMMK 190
Score = 67.7 bits (166), Expect = 1e-12
Identities = 20/83 (24%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
++ + +D DG G+I + EF+ L + ++ + F + D D +G I ELA +
Sbjct: 89 FDLLLDQIDSDGSGKIDYTEFI-AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHI 147
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
L + + T ++V +I
Sbjct: 148 LYNGNKKGNITQRDVNRVKRMIR 170
Score = 60.7 bits (148), Expect = 3e-10
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
++ + +D DG G+I + EF+ L + ++ + F + D D +G I ELA +
Sbjct: 89 FDLLLDQIDSDGSGKIDYTEFI-AAALDRKQLSKKLIYCAFRVFDVDNDGEITTAELAHI 147
Query: 132 LRSLVE 137
L + +
Sbjct: 148 LYNGNK 153
Score = 48.4 bits (116), Expect = 5e-06
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGE-LAE 130
+ F ++D+DG G I+ ++ L G ++ D D+D +G ID E +A
Sbjct: 55 KSTFLVLDEDGKGYITKEQLKK--GLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAA 112
Query: 131 MLR 133
L
Sbjct: 113 ALD 115
Score = 48.4 bits (116), Expect = 5e-06
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGE-LAE 1273
+ F ++D+DG G I+ ++ L G ++ D D+D +G ID E +A
Sbjct: 55 KSTFLVLDEDGKGYITKEQLKK--GLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAA 112
Query: 1274 MLR 1276
L
Sbjct: 113 ALD 115
Score = 46.1 bits (110), Expect = 2e-05
Identities = 35/164 (21%), Positives = 54/164 (32%), Gaps = 50/164 (30%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSP------- 1303
L+ F + D D G I K +L + L ++ D +
Sbjct: 54 LKSTFLVLDEDGKGYITKEQLKKGLEKD----------GLKLPYNFDLLLDQIDSDGSGK 103
Query: 1304 ---RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRA 1359
E + A + ++ +K + FR F D D G ++ A
Sbjct: 104 IDYTEFIAAALDRKQLSKKLIYCAFRV-----F----------DVDNDG------EITTA 142
Query: 1360 EFASALG--------MKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
E A L + D V+ M VDK+ DG+I F EF
Sbjct: 143 ELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Score = 41.9 bits (99), Expect = 8e-04
Identities = 15/76 (19%), Positives = 24/76 (31%), Gaps = 10/76 (13%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
L+ F + D D G I K +L + L ++ D + D
Sbjct: 54 LKSTFLVLDEDGKGYITKEQLKKGLEKD----------GLKLPYNFDLLLDQIDSDGSGK 103
Query: 1470 LTYQDFKLMMRDYKGD 1485
+ Y +F D K
Sbjct: 104 IDYTEFIAAALDRKQL 119
Score = 41.5 bits (98), Expect = 0.001
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHT-------EDKLRIIFDMCDNDRNGVIDKGEL 128
F + D D DG I+ E +L++ ++++ + D + +G ID E
Sbjct: 128 FRVFDVDNDGEITTAELAH--ILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
Query: 129 AEMLR 133
+EM++
Sbjct: 186 SEMMK 190
Score = 41.5 bits (98), Expect = 0.001
Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 9/65 (13%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHT-------EDKLRIIFDMCDNDRNGVIDKGEL 1271
F + D D DG I+ E +L++ ++++ + D + +G ID E
Sbjct: 128 FRVFDVDNDGEITTAELAH--ILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEF 185
Query: 1272 AEMLR 1276
+EM++
Sbjct: 186 SEMMK 190
Score = 38.4 bits (90), Expect = 0.010
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 55 SRAEFASALG--------MKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ AE A L + D V+ M VDK+ DG+I F EF
Sbjct: 140 TTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Score = 38.4 bits (90), Expect = 0.010
Identities = 16/47 (34%), Positives = 21/47 (44%), Gaps = 8/47 (17%)
Query: 1198 SRAEFASALG--------MKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ AE A L + D V+ M VDK+ DG+I F EF
Sbjct: 140 TTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Score = 33.0 bits (76), Expect = 0.58
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
L+ F + D D G I K +L + L
Sbjct: 54 LKSTFLVLDEDGKGYITKEQLKKGLEKD 81
>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo
pealeii}
Length = 191
Score = 75.3 bits (185), Expect = 3e-15
Identities = 18/119 (15%), Positives = 41/119 (34%), Gaps = 20/119 (16%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK---------LRIIFDMCDNDRNG 1423
+ D++ D +++ +E+L + + + + +FD+ D +
Sbjct: 65 IWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDN 124
Query: 1424 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482
+IDK E + + S + S F K +T + F + +Y
Sbjct: 125 IIDKHEYSTVYMSYG-------IPKSDCDA----AFDTLSDGGKTMVTREIFARLWTEY 172
Score = 59.5 bits (144), Expect = 7e-10
Identities = 21/145 (14%), Positives = 49/145 (33%), Gaps = 28/145 (19%)
Query: 9 RQLRERRQKKLEHFFREAY------ALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASA 62
QL + ++ K+ F Y + DD + +L
Sbjct: 4 HQLSDFQRNKILRVFNTFYDCNHDGVIE----------WDDFELAIKKICNLHSWPTDGK 53
Query: 63 LGMKSDAVFVRM---MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK---------LRI 110
++ A + + D++ D +++ +E+L + + + +
Sbjct: 54 KHNEARATLKLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNF 113
Query: 111 IFDMCDNDRNGVIDKGELAEMLRSL 135
+FD+ D + +IDK E + + S
Sbjct: 114 MFDVNDTSGDNIIDKHEYSTVYMSY 138
Score = 57.5 bits (139), Expect = 3e-09
Identities = 17/171 (9%), Positives = 47/171 (27%), Gaps = 36/171 (21%)
Query: 1248 EDKLRIIFD-MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPREL 1306
+K+ +F+ D + +GVI+ + ++ + + + + E + L
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNL-HSWPTDGKKHNEARATLKLIWDGL 69
Query: 1307 -------------------MLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DE 1346
M A+ + + L + + F D
Sbjct: 70 RKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMF-------DVNDTSG 122
Query: 1347 TGEVVMRTSLSRAEFASALG-MKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
+ + E+++ F+ + G ++ + F
Sbjct: 123 DN------IIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFAR 167
Score = 57.2 bits (138), Expect = 5e-09
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
++ MF++ D GD I E+ + V S G + FD + ++ + A
Sbjct: 110 YMNFMFDVNDTSGDNIIDKHEY--STVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFAR 167
Query: 131 MLR 133
+
Sbjct: 168 LWT 170
Score = 57.2 bits (138), Expect = 5e-09
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
++ MF++ D GD I E+ + V S G + FD + ++ + A
Sbjct: 110 YMNFMFDVNDTSGDNIIDKHEY--STVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFAR 167
Query: 1274 MLR 1276
+
Sbjct: 168 LWT 170
Score = 43.3 bits (102), Expect = 3e-04
Identities = 11/86 (12%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 1407 EDKLRIIFD-MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD------SQVTELIDGMF 1459
+K+ +F+ D + +GVI+ + ++ + + + + + + DG+
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLR 70
Query: 1460 QDAGLDSKDFLTYQDFKLMMRDYKGD 1485
+ A + + +T +++ M +
Sbjct: 71 KYADENEDEQVTKEEWLKMWAECVKS 96
Score = 41.7 bits (98), Expect = 7e-04
Identities = 11/110 (10%), Positives = 26/110 (23%), Gaps = 30/110 (27%)
Query: 1130 FLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DET 1188
+L + + V+ L E K + F D
Sbjct: 86 WLKMWAECVKSVEKGESL-------PEWLTKYMNFMFDVN---------------DTSGD 123
Query: 1189 GEVVMRTSLSRAEFASALG-MKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
+ + E+++ F+ + G ++ + F
Sbjct: 124 N------IIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFAR 167
Score = 41.4 bits (97), Expect = 0.001
Identities = 4/43 (9%), Positives = 14/43 (32%), Gaps = 1/43 (2%)
Query: 53 SLSRAEFASALG-MKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
+ + E+++ F+ + G ++ + F
Sbjct: 125 IIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFAR 167
Score = 35.6 bits (82), Expect = 0.081
Identities = 12/82 (14%), Positives = 25/82 (30%), Gaps = 15/82 (18%)
Query: 71 FVRMMFNIVDKDGDGRISFQEF--LDTVVLFSRGHTEDKLRI-------------IFDMC 115
+R+ D + DG I + +F + D + +
Sbjct: 14 ILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATLKLIWDGLRKYA 73
Query: 116 DNDRNGVIDKGELAEMLRSLVE 137
D + + + K E +M V+
Sbjct: 74 DENEDEQVTKEEWLKMWAECVK 95
Score = 32.5 bits (74), Expect = 0.84
Identities = 6/39 (15%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Query: 105 EDKLRIIFD-MCDNDRNGVIDKGELAEMLRSLVEMARTS 142
+K+ +F+ D + +GVI+ + ++ + +
Sbjct: 11 RNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWP 49
>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand,
phosphoprotein, calcium binding; 2.65A {Homo sapiens}
Length = 204
Score = 73.9 bits (182), Expect = 1e-14
Identities = 24/131 (18%), Positives = 43/131 (32%), Gaps = 6/131 (4%)
Query: 1355 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
SL EF L G+ D + D++G G + +EFL + E +
Sbjct: 53 SLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIA 112
Query: 1412 IIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD-FL 1470
F D +GV+ +L + + E++ + KD +
Sbjct: 113 AAFAKLDRSGDGVVTVDDLRGVYSG--RAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQV 170
Query: 1471 TYQDFKLMMRD 1481
T +F+
Sbjct: 171 TLAEFQDYYSG 181
Score = 62.0 bits (151), Expect = 1e-10
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 5/107 (4%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
SL EF L G+ D + D++G G + +EFL + E +
Sbjct: 53 SLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIA 112
Query: 1253 IIFDMCDNDRNGVIDKGELAEMLRSL--VEMARTTSLTDSQVTELID 1297
F D +GV+ +L + ++ D + +D
Sbjct: 113 AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLD 159
Score = 60.4 bits (147), Expect = 5e-10
Identities = 19/85 (22%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
SL EF L G+ D + D++G G + +EFL + E +
Sbjct: 53 SLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIA 112
Query: 110 IIFDMCDNDRNGVIDKGELAEMLRS 134
F D +GV+ +L +
Sbjct: 113 AAFAKLDRSGDGVVTVDDLRGVYSG 137
Score = 51.6 bits (124), Expect = 4e-07
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEML 132
F +D+DG + EF L G + + + D + +G +D E L
Sbjct: 42 FFRQLDRDGSRSLDADEFR--QGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL 99
Query: 133 RSLVEMAR 140
R + AR
Sbjct: 100 RPPMSQAR 107
Score = 51.6 bits (124), Expect = 4e-07
Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 4/68 (5%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
F +D+DG + EF L G + + + D + +G +D E L
Sbjct: 42 FFRQLDRDGSRSLDADEFR--QGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRAL 99
Query: 1276 RSLVEMAR 1283
R + AR
Sbjct: 100 RPPMSQAR 107
Score = 47.0 bits (112), Expect = 2e-05
Identities = 30/177 (16%), Positives = 48/177 (27%), Gaps = 48/177 (27%)
Query: 1241 LFSRGHTE-DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI--- 1296
SRG + L F D D + +D E + L L L ++ +
Sbjct: 28 CLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKL-----GLVLDQAEAEGVCRKW 82
Query: 1297 ----DGM--FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEV 1350
G + E + A R + E A+A G V
Sbjct: 83 DRNGSGTLDLE---EFLRA---LRPPMSQAREAVIAAAFAK-L---------DRSGDGVV 126
Query: 1351 VMRTSLSRAEFASALG-----------MKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
+ + D V R + N + DG+++ EF D
Sbjct: 127 ------TVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQD 177
Score = 39.6 bits (93), Expect = 0.004
Identities = 15/82 (18%), Positives = 27/82 (32%), Gaps = 10/82 (12%)
Query: 1400 LFSRGHTE-DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1458
SRG + L F D D + +D E + L L L ++ +
Sbjct: 28 CLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKL-----GLVLDQAEAEG----V 78
Query: 1459 FQDAGLDSKDFLTYQDFKLMMR 1480
+ + L ++F +R
Sbjct: 79 CRKWDRNGSGTLDLEEFLRALR 100
Score = 39.6 bits (93), Expect = 0.005
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 19/93 (20%)
Query: 58 EFASALG--MKSD-AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL------ 108
EF AL M + F +D+ GDG ++ + V R H + +
Sbjct: 94 EFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRG--VYSGRAHPKVRSGEWTED 151
Query: 109 ----RII--FDMCDNDRNGVIDKGELAEMLRSL 135
R + FD + D G + E + +
Sbjct: 152 EVLRRFLDNFDSSEKD--GQVTLAEFQDYYSGV 182
Score = 39.6 bits (93), Expect = 0.005
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 19/93 (20%)
Query: 1201 EFASALG--MKSD-AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL------ 1251
EF AL M + F +D+ GDG ++ + V R H + +
Sbjct: 94 EFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRG--VYSGRAHPKVRSGEWTED 151
Query: 1252 ----RII--FDMCDNDRNGVIDKGELAEMLRSL 1278
R + FD + D G + E + +
Sbjct: 152 EVLRRFLDNFDSSEKD--GQVTLAEFQDYYSGV 182
Score = 39.6 bits (93), Expect = 0.005
Identities = 19/93 (20%), Positives = 32/93 (34%), Gaps = 19/93 (20%)
Query: 1360 EFASALG--MKSD-AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKL------ 1410
EF AL M + F +D+ GDG ++ + V R H + +
Sbjct: 94 EFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRG--VYSGRAHPKVRSGEWTED 151
Query: 1411 ----RII--FDMCDNDRNGVIDKGELAEMLRSL 1437
R + FD + D G + E + +
Sbjct: 152 EVLRRFLDNFDSSEKD--GQVTLAEFQDYYSGV 182
Score = 32.7 bits (75), Expect = 0.92
Identities = 11/39 (28%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 98 LFSRGHTE-DKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
SRG + L F D D + +D E + L L
Sbjct: 28 CLSRGASGIQGLARFFRQLDRDGSRSLDADEFRQGLAKL 66
>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN
membrane targeting, EF-hand, cell projection, cilium;
2.00A {Trypanosoma cruzi}
Length = 219
Score = 74.2 bits (182), Expect = 1e-14
Identities = 26/141 (18%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Query: 1345 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1404
DE + L EF S + + F + + G F EFL+ ++
Sbjct: 68 DEVYSGCLE-VLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYI 126
Query: 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
+ +L ++FD D N ++D+ E + L E +F++
Sbjct: 127 YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAK--------VEDPAALFKELDK 178
Query: 1465 DSKDFLTYQDFKLMMRDYKGD 1485
+ +T+ +F K D
Sbjct: 179 NGTGSVTFDEFAAWASAVKLD 199
Score = 64.5 bits (157), Expect = 2e-11
Identities = 21/112 (18%), Positives = 37/112 (33%), Gaps = 5/112 (4%)
Query: 1186 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1245
DE + L EF S + + F + + G F EFL+ ++
Sbjct: 68 DEVYSGCLE-VLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYI 126
Query: 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ +L ++FD D N ++D+ E + L L
Sbjct: 127 YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEA----WGAKVEDPAALFK 174
Score = 62.2 bits (151), Expect = 1e-10
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 1/93 (1%)
Query: 43 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 102
DE + L EF S + + F + + G F EFL+ ++
Sbjct: 68 DEVYSGCLE-VLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYI 126
Query: 103 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ +L ++FD D N ++D+ E + L
Sbjct: 127 YDFFELTVMFDEIDASGNMLVDEEEFKRAVPKL 159
Score = 57.2 bits (138), Expect = 8e-09
Identities = 29/212 (13%), Positives = 58/212 (27%), Gaps = 52/212 (24%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELML 1308
+ +F D + G + E+ ++++ TS + D R
Sbjct: 48 QRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTS-------RVRDITK---RAFDK 97
Query: 1309 AKAETRERRQKKLEHF--FREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG 1366
++ + K E F F E + E
Sbjct: 98 SRTLGSKLENKGSEDFVEFLEFRLML------CYIYDFFE-------------------- 131
Query: 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFDMCDNDRNGVI 1425
+ +MF+ +D G+ + +EF V L + G + +F D + G +
Sbjct: 132 -------LTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSV 184
Query: 1426 DKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1457
E A + D + +
Sbjct: 185 TFDEFAAW------ASAVKLDADGDPDNVPES 210
Score = 49.1 bits (117), Expect = 4e-06
Identities = 18/108 (16%), Positives = 34/108 (31%), Gaps = 10/108 (9%)
Query: 1201 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFD 1256
EF M + +MF+ +D G+ + +EF V L + G + +F
Sbjct: 115 EFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFK 174
Query: 1257 MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPR 1304
D + G + E A + D + + +
Sbjct: 175 ELDKNGTGSVTFDEFAAW------ASAVKLDADGDPDNVPESALEHHH 216
Score = 48.0 bits (114), Expect = 9e-06
Identities = 20/105 (19%), Positives = 35/105 (33%), Gaps = 10/105 (9%)
Query: 58 EFASALGMKSDAVF---VRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFD 113
EF M + +MF+ +D G+ + +EF V L + G + +F
Sbjct: 115 EFLEFRLMLCYIYDFFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFK 174
Query: 114 MCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIVLR 158
D + G + E A + + G V + L
Sbjct: 175 ELDKNGTGSVTFDEFAAW------ASAVKLDADGDPDNVPESALE 213
Score = 42.6 bits (100), Expect = 5e-04
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 54 LSRAEFASALGMKSDAVF----VRMMFNIVDKDGDGRISFQEFLD 94
+ EF A+ +F +DK+G G ++F EF
Sbjct: 147 VDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
Score = 42.6 bits (100), Expect = 5e-04
Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 4/45 (8%)
Query: 1197 LSRAEFASALGMKSDAVF----VRMMFNIVDKDGDGRISFQEFLD 1237
+ EF A+ +F +DK+G G ++F EF
Sbjct: 147 VDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191
Score = 39.1 bits (91), Expect = 0.007
Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 12/85 (14%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFD---------MCDNDRNG 1264
+F DK+ G++ + E + + L ++R I + G
Sbjct: 51 IELFKKFDKNETGKLCYDE-VYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKG 109
Query: 1265 VIDKGELAEMLRSLVEMARTTSLTD 1289
D E E L + LT
Sbjct: 110 SEDFVEFLEFRLMLCYIYDFFELTV 134
Score = 39.1 bits (91), Expect = 0.007
Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 12/79 (15%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFD---------MCDNDRNG 121
+F DK+ G++ + E + + L ++R I + G
Sbjct: 51 IELFKKFDKNETGKLCYDE-VYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKG 109
Query: 122 VIDKGELAEMLRSLVEMAR 140
D E E L +
Sbjct: 110 SEDFVEFLEFRLMLCYIYD 128
Score = 37.6 bits (87), Expect = 0.024
Identities = 8/77 (10%), Positives = 23/77 (29%), Gaps = 9/77 (11%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+ +F D + G + E+ ++++ S+V ++ F +
Sbjct: 48 QRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDE----FTSRVRDITKRAFDKSRTLGS 103
Query: 1468 D-----FLTYQDFKLMM 1479
+ +F
Sbjct: 104 KLENKGSEDFVEFLEFR 120
Score = 31.4 bits (71), Expect = 2.2
Identities = 4/36 (11%), Positives = 13/36 (36%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 141
+ +F D + G + E+ ++++
Sbjct: 48 QRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEF 83
>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin
chimera; calcium sensor, fluorescent protein; HET: CRO;
1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A*
3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A*
3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A
Length = 450
Score = 77.2 bits (190), Expect = 2e-14
Identities = 60/236 (25%), Positives = 93/236 (39%), Gaps = 52/236 (22%)
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETR 1314
+ D + E+ +LV + ID F+ ++ K E
Sbjct: 253 RTIFFKDDGNYKTRAEVKFEGDTLVNRIEL---------KGID--FKEDGNILGHKLEYN 301
Query: 1315 ERRQKKLEHF--FREAYALTFGLKPGEKRRRD-DETGEV-------VMRTSLSRAEFASA 1364
R Q E F+EA++L D D G + VMR +
Sbjct: 302 TRDQLTEEQIAEFKEAFSL-----------FDKDGDGTITTKELGTVMR----------S 340
Query: 1365 LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNG 1423
LG ++ M N VD DG+G I F EFL + + +E+++R F + D D NG
Sbjct: 341 LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNG 400
Query: 1424 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
I EL ++ +L E LTD +V E+I +A +D + Y++F MM
Sbjct: 401 YISAAELRHVMTNLGE-----KLTDEEVDEMIR----EADIDGDGQVNYEEFVQMM 447
Score = 65.7 bits (160), Expect = 7e-11
Identities = 51/249 (20%), Positives = 87/249 (34%), Gaps = 59/249 (23%)
Query: 1174 FGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA----VFVRMMFNIVDKDGDGR 1229
F P ++ D + R F G + N ++ G
Sbjct: 228 FSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG--- 284
Query: 1230 ISFQEFLDTVVLFSRGHTEDKL--------RIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281
I F+E + + +T D+L + F + D D +G I EL ++RSL +
Sbjct: 285 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN 344
Query: 1282 ARTTSLTDSQVTELI-----DGM----FQSPRELMLAKAETRERRQKKLEHFFREAYALT 1332
T++++ ++I DG F +M K + + ++ E F
Sbjct: 345 -----PTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAF-------- 391
Query: 1333 FGLKPGEKRRR---DDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGD 1386
R D G + S AE + LG K V M D DGD
Sbjct: 392 ----------RVFDKDGNGYI------SAAELRHVMTNLGEKLTDEEVDEMIREADIDGD 435
Query: 1387 GRISFQEFL 1395
G+++++EF+
Sbjct: 436 GQVNYEEFV 444
Score = 56.8 bits (137), Expect = 4e-08
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 336 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEE 385
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++R F + D D NG I EL ++ +L
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNL 414
Score = 44.9 bits (106), Expect = 2e-04
Identities = 24/117 (20%), Positives = 40/117 (34%), Gaps = 15/117 (12%)
Query: 31 FGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDA----VFVRMMFNIVDKDGDGR 86
F P ++ D + R F G + N ++ G
Sbjct: 228 FSRYPDHMKQHDFFKSAMPEGYIQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKG--- 284
Query: 87 ISFQEFLDTVVLFSRGHTEDKL--------RIIFDMCDNDRNGVIDKGELAEMLRSL 135
I F+E + + +T D+L + F + D D +G I EL ++RSL
Sbjct: 285 IDFKEDGNILGHKLEYNTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL 341
Score = 37.9 bits (88), Expect = 0.035
Identities = 9/22 (40%), Positives = 15/22 (68%)
Query: 72 VRMMFNIVDKDGDGRISFQEFL 93
V M D DGDG+++++EF+
Sbjct: 423 VDEMIREADIDGDGQVNYEEFV 444
Score = 37.6 bits (87), Expect = 0.045
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
R F + DKDG+G IS E V+ + G T++++ + D D +G ++ E +
Sbjct: 388 REAFRVFDKDGNGYISAAEL--RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
Query: 131 ML 132
M+
Sbjct: 446 MM 447
Score = 37.6 bits (87), Expect = 0.045
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
R F + DKDG+G IS E V+ + G T++++ + D D +G ++ E +
Sbjct: 388 REAFRVFDKDGNGYISAAEL--RHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 445
Query: 1274 ML 1275
M+
Sbjct: 446 MM 447
>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 188
Score = 72.6 bits (179), Expect = 2e-14
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++ + + D D G I + EF+ V ++ E+ L F D D +G I E+ +
Sbjct: 48 IKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA 107
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGD 1485
+ L D ID M ++ D+ + Y +F MMR KG+
Sbjct: 108 CKDF-------GLDD----IHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKGN 148
Score = 64.9 bits (159), Expect = 9e-12
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
++ + + D D G I + EF+ V ++ E+ L F D D +G I E+ +
Sbjct: 48 IKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA 107
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
+ L D + ++I
Sbjct: 108 CKDF-------GLDDIHIDDMIK 123
Score = 64.6 bits (158), Expect = 1e-11
Identities = 45/228 (19%), Positives = 71/228 (31%), Gaps = 71/228 (31%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ +F ++D D G I+F E L G E +++ + D D D++G ID GE
Sbjct: 13 KELFKMIDTDNSGTITFDELK--DGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 70
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
L K E E A++ F
Sbjct: 71 A------TVH------------------------LNKLEREEN--------LVSAFSY-F 91
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRIS 1390
D +G ++ E A G+ D + M +D+D DG+I
Sbjct: 92 D---------KDGSG------YITLDEIQQACKDFGL-DDIH-IDDMIKEIDQDNDGQID 134
Query: 1391 FQEFL--------DTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ EF + + LR + DN N VI+
Sbjct: 135 YGEFAAMMRKRKGNGGIGRRTMRKTLNLRDALGLVDNGSNQVIEGYFK 182
Score = 61.1 bits (149), Expect = 2e-10
Identities = 15/64 (23%), Positives = 28/64 (43%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
++ + + D D G I + EF+ V ++ E+ L F D D +G I E+ +
Sbjct: 48 IKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA 107
Query: 132 LRSL 135
+
Sbjct: 108 CKDF 111
Score = 46.1 bits (110), Expect = 3e-05
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL--------DTVVLFSRGHTEDKLR 109
+ G+ D + M +D+D DG+I + EF + + LR
Sbjct: 106 QACKDFGL-DDIH-IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR 163
Query: 110 IIFDMCDNDRNGVIDKGEL 128
+ DN N VI+
Sbjct: 164 DALGLVDNGSNQVIEGYFK 182
Score = 46.1 bits (110), Expect = 3e-05
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL--------DTVVLFSRGHTEDKLR 1252
+ G+ D + M +D+D DG+I + EF + + LR
Sbjct: 106 QACKDFGL-DDIH-IDDMIKEIDQDNDGQIDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR 163
Query: 1253 IIFDMCDNDRNGVIDKGEL 1271
+ DN N VI+
Sbjct: 164 DALGLVDNGSNQVIEGYFK 182
Score = 45.7 bits (109), Expect = 3e-05
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
+ +F ++D D G I+F E L G E +++ + D D D++G ID GE +A
Sbjct: 13 KELFKMIDTDNSGTITFDELK--DGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 70
Query: 130 EMLR 133
+
Sbjct: 71 ATVH 74
Score = 43.8 bits (104), Expect = 1e-04
Identities = 20/79 (25%), Positives = 28/79 (35%), Gaps = 17/79 (21%)
Query: 71 FVRMM---------------FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 115
F+ F+ DKDG G I+ E G + + +
Sbjct: 68 FIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQ--ACKDFGLDDIHIDDMIKEI 125
Query: 116 DNDRNGVIDKGELAEMLRS 134
D D +G ID GE A M+R
Sbjct: 126 DQDNDGQIDYGEFAAMMRK 144
Score = 39.1 bits (92), Expect = 0.006
Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
L+ +F M D D +G I EL + L+ + + L +S++ +L+D A +D
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRV-----GSELMESEIKDLMD----AADIDKSGT 62
Query: 1470 LTYQDFKLMMRDYK 1483
+ Y +F
Sbjct: 63 IDYGEFIAATVHLN 76
Score = 33.0 bits (76), Expect = 0.60
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
L+ +F M D D +G I EL + L+ +
Sbjct: 12 LKELFKMIDTDNSGTITFDELKDGLKRV 39
>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent
kinase, structural genomics, structural GE consortium,
SGC, ATP-binding; 1.95A {Toxoplasma gondii}
Length = 191
Score = 71.5 bits (176), Expect = 5e-14
Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
V + VD D +G I + EF+ + + ++L F D+D +G I EL +
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 148
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
+ D E + Q+ ++ + +++F MM+
Sbjct: 149 FGVT-------EVDD----ETWHQVLQECDKNNDGEVDFEEFVEMMQ 184
Score = 63.8 bits (156), Expect = 2e-11
Identities = 17/83 (20%), Positives = 32/83 (38%), Gaps = 7/83 (8%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
V + VD D +G I + EF+ + + ++L F D+D +G I EL +
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 148
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
+ D +++
Sbjct: 149 FGVT-------EVDDETWHQVLQ 164
Score = 60.0 bits (146), Expect = 5e-10
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
V + VD D +G I + EF+ + + ++L F D+D +G I EL +
Sbjct: 89 VDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 148
Query: 132 LRS 134
Sbjct: 149 FGV 151
Score = 53.4 bits (129), Expect = 9e-08
Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 46/167 (27%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTT------SLTDSQVTELIDGM--- 1299
+L IF DN+ +G +D+ EL E R L++ T S +++V ++ +
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 1300 ---------FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGE 1349
F + + + +++L F++ F D D +G
Sbjct: 100 RNGYIEYSEF-----VTVCMDKQLLLSRERLLAAFQQ-----F----------DSDGSG- 138
Query: 1350 VVMRTSLSRAEFASALG-MKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
++ E G + D + DK+ DG + F+EF+
Sbjct: 139 -----KITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Score = 48.1 bits (115), Expect = 5e-06
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F D DG G+I+ +E + ++ + CD + +G +D E EM++ +
Sbjct: 129 FQQFDSDGSGKITNEELGR--LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Query: 136 VE 137
+
Sbjct: 187 CD 188
Score = 48.1 bits (115), Expect = 5e-06
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F D DG G+I+ +E + ++ + CD + +G +D E EM++ +
Sbjct: 129 FQQFDSDGSGKITNEELGR--LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Query: 1279 VE 1280
+
Sbjct: 187 CD 188
Score = 48.1 bits (115), Expect = 5e-06
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
F D DG G+I+ +E + ++ + CD + +G +D E EM++ +
Sbjct: 129 FQQFDSDGSGKITNEELGR--LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKI 186
Query: 1438 VE 1439
+
Sbjct: 187 CD 188
Score = 45.7 bits (109), Expect = 3e-05
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Query: 75 MFNIVDKDGDGRISFQEFLD---------TVVLFSRGH--TEDKLRIIFDMCDNDRNGVI 123
+F +D +GDG++ +E ++ + E ++ I D DRNG I
Sbjct: 45 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 104
Query: 124 DKGE-LAEMLR 133
+ E + +
Sbjct: 105 EYSEFVTVCMD 115
Score = 45.7 bits (109), Expect = 3e-05
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 12/71 (16%)
Query: 1218 MFNIVDKDGDGRISFQEFLD---------TVVLFSRGH--TEDKLRIIFDMCDNDRNGVI 1266
+F +D +GDG++ +E ++ + E ++ I D DRNG I
Sbjct: 45 IFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYI 104
Query: 1267 DKGE-LAEMLR 1276
+ E + +
Sbjct: 105 EYSEFVTVCMD 115
Score = 40.7 bits (96), Expect = 0.002
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 55 SRAEFASALG-MKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ E G + D + DK+ DG + F+EF+
Sbjct: 141 TNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Score = 40.7 bits (96), Expect = 0.002
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 1198 SRAEFASALG-MKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ E G + D + DK+ DG + F+EF+
Sbjct: 141 TNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Score = 39.6 bits (93), Expect = 0.004
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLT-DSQVTEL-IDGMFQDAGLD 1465
+L IF DN+ +G +D+ EL E R L++ T DS E +D + Q D
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 1466 SKDFLTYQDF-KLMMRDYKGD 1485
++ Y +F + M
Sbjct: 100 RNGYIEYSEFVTVCMDKQLLL 120
Score = 33.4 bits (77), Expect = 0.46
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATT 151
+L IF DN+ +G +D+ EL E R L++ + ++
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQI 85
>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like
domain, EF calcium binding protein, transferase; 2.00A
{Arabidopsis thaliana}
Length = 166
Score = 71.0 bits (175), Expect = 5e-14
Identities = 24/107 (22%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ + D D G I ++EF+ + ++ ED L F D D +G I EL +
Sbjct: 65 ILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQA 124
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
+ D I+ + +D D+ + Y +F MM+
Sbjct: 125 CEEF-------GVED----VRIEELMRDVDQDNDGRIDYNEFVAMMQ 160
Score = 64.1 bits (157), Expect = 1e-11
Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 7/83 (8%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ + D D G I ++EF+ + ++ ED L F D D +G I EL +
Sbjct: 65 ILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQA 124
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
+ D ++ EL+
Sbjct: 125 CEEF-------GVEDVRIEELMR 140
Score = 59.8 bits (146), Expect = 3e-10
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ + D D G I ++EF+ + ++ ED L F D D +G I EL +
Sbjct: 65 ILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQA 124
Query: 132 LRSL 135
Sbjct: 125 CEEF 128
Score = 51.0 bits (123), Expect = 3e-07
Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 39/156 (25%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-------DGMFQSP 1303
L+ +F+M D D++G I EL L+ + +L +S++ +L+ G
Sbjct: 29 LKEMFNMIDADKSGQITFEELKAGLKRV-----GANLKESEILDLMQAADVDNSGTIDYK 83
Query: 1304 RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEFA 1362
+ + R+ L F F D D +G ++ E
Sbjct: 84 EFIAATLHLNKIEREDHLFAAFT-----YF----------DKDGSG------YITPDELQ 122
Query: 1363 SA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
A G++ + + VD+D DGRI + EF+
Sbjct: 123 QACEEFGVEDV--RIEELMRDVDQDNDGRIDYNEFV 156
Score = 47.9 bits (115), Expect = 4e-06
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ MFN++D D G+I+F+E L G E ++ + D D +G ID E
Sbjct: 30 KEMFNMIDADKSGQITFEELK--AGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIA 87
Query: 131 MLRSLVEM 138
L ++
Sbjct: 88 ATLHLNKI 95
Score = 47.9 bits (115), Expect = 4e-06
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ MFN++D D G+I+F+E L G E ++ + D D +G ID E
Sbjct: 30 KEMFNMIDADKSGQITFEELK--AGLKRVGANLKESEILDLMQAADVDNSGTIDYKEFIA 87
Query: 1274 MLRSLVEM 1281
L ++
Sbjct: 88 ATLHLNKI 95
Score = 44.8 bits (107), Expect = 5e-05
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
F DKDG G I+ E G + ++ + D D +G ID E M++
Sbjct: 105 FTYFDKDGSGYITPDELQQ--ACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161
Score = 44.8 bits (107), Expect = 5e-05
Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
F DKDG G I+ E G + ++ + D D +G ID E M++
Sbjct: 105 FTYFDKDGSGYITPDELQQ--ACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQK 161
Score = 41.3 bits (98), Expect = 6e-04
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
L+ +F+M D D++G I EL L+ + +L +S++ +L+ Q A +D+
Sbjct: 29 LKEMFNMIDADKSGQITFEELKAGLKRV-----GANLKESEILDLM----QAADVDNSGT 79
Query: 1470 LTYQDFKLMMRDYK 1483
+ Y++F
Sbjct: 80 IDYKEFIAATLHLN 93
Score = 38.7 bits (91), Expect = 0.005
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ E A G++ + + VD+D DGRI + EF+
Sbjct: 117 TPDELQQACEEFGVEDV--RIEELMRDVDQDNDGRIDYNEFV 156
Score = 38.7 bits (91), Expect = 0.005
Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ E A G++ + + VD+D DGRI + EF+
Sbjct: 117 TPDELQQACEEFGVEDV--RIEELMRDVDQDNDGRIDYNEFV 156
Score = 33.3 bits (77), Expect = 0.38
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
L+ +F+M D D++G I EL L+ +
Sbjct: 29 LKEMFNMIDADKSGQITFEELKAGLKRV 56
>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP,
structural genomics, PSI; 1.95A {Leishmania major} SCOP:
a.39.1.8
Length = 191
Score = 71.6 bits (176), Expect = 6e-14
Identities = 19/106 (17%), Positives = 39/106 (36%), Gaps = 15/106 (14%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ ++ DK+ G I+F EF D L +R F D+ +G +D E+
Sbjct: 65 TEKLLHMYDKNHSGEITFDEFKD---LHHF---ILSMREGFRKRDSSGDGRLDSNEVRAA 118
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
L S +++ + + + + L + D+ +
Sbjct: 119 LLSSGY-----QVSE----QTFQALMRKFDRQRRGSLGFDDYVELS 155
Score = 65.4 bits (160), Expect = 6e-12
Identities = 39/217 (17%), Positives = 63/217 (29%), Gaps = 75/217 (34%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ F VD DG G IS E L S G + + M D + +G I E
Sbjct: 29 LMEWFRAVDTDGSGAISVPEL--NAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDE-- 84
Query: 1273 EMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALT 1332
F+ +L RE
Sbjct: 85 ---------------------------FK---DLHHFILSMRE----------------G 98
Query: 1333 FGLKPGEKRRRD-DETGEVVMRTSLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGR 1388
F R+RD G L E +AL G + + + D+ G
Sbjct: 99 F-------RKRDSSGDG------RLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGS 145
Query: 1389 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1425
+ F ++++ + ++R +F D +R G +
Sbjct: 146 LGFDDYVELSI------FVCRVRNVFAFYDRERTGQV 176
Score = 60.0 bits (146), Expect = 4e-10
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ ++ DK+ G I+F EF D L +R F D+ +G +D E+
Sbjct: 65 TEKLLHMYDKNHSGEITFDEFKD---LHHF---ILSMREGFRKRDSSGDGRLDSNEVRAA 118
Query: 132 LRSL 135
L S
Sbjct: 119 LLSS 122
Score = 49.6 bits (119), Expect = 2e-06
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 129
+ F VD DG G IS E L S G + + M D + +G I E
Sbjct: 29 LMEWFRAVDTDGSGAISVPEL--NAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 130 EMLRSLVEMARTSF 143
++ ++ M R F
Sbjct: 87 DLHHFILSM-REGF 99
Score = 48.4 bits (116), Expect = 4e-06
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
L E +AL G + + + D+ G + F ++++ + ++R
Sbjct: 109 RLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI------FVCRVR 162
Query: 110 IIFDMCDNDRNGVI 123
+F D +R G +
Sbjct: 163 NVFAFYDRERTGQV 176
Score = 48.4 bits (116), Expect = 4e-06
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 9/74 (12%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
L E +AL G + + + D+ G + F ++++ + ++R
Sbjct: 109 RLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI------FVCRVR 162
Query: 1253 IIFDMCDNDRNGVI 1266
+F D +R G +
Sbjct: 163 NVFAFYDRERTGQV 176
Score = 41.5 bits (98), Expect = 0.001
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMC 115
EF +R F D GDGR+ E L S G+ +E + +
Sbjct: 84 EFKDLHHFILS---MREGFRKRDSSGDGRLDSNEVRA--ALLSSGYQVSEQTFQALMRKF 138
Query: 116 DNDRNGVIDKGELAEMLRSLVEM 138
D R G + + E+ + +
Sbjct: 139 DRQRRGSLGFDDYVELSIFVCRV 161
Score = 41.5 bits (98), Expect = 0.001
Identities = 18/83 (21%), Positives = 29/83 (34%), Gaps = 7/83 (8%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMC 1258
EF +R F D GDGR+ E L S G+ +E + +
Sbjct: 84 EFKDLHHFILS---MREGFRKRDSSGDGRLDSNEVRA--ALLSSGYQVSEQTFQALMRKF 138
Query: 1259 DNDRNGVIDKGELAEMLRSLVEM 1281
D R G + + E+ + +
Sbjct: 139 DRQRRGSLGFDDYVELSIFVCRV 161
Score = 40.0 bits (94), Expect = 0.003
Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 9/75 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+L F D D +G I EL L S + + +L+ M+ D +
Sbjct: 25 DNQELMEWFRAVDTDGSGAISVPELNAALSSA-----GVPFSLATTEKLLH-MY-DK--N 75
Query: 1466 SKDFLTYQDFKLMMR 1480
+T+ +FK +
Sbjct: 76 HSGEITFDEFKDLHH 90
Score = 33.4 bits (77), Expect = 0.39
Identities = 10/32 (31%), Positives = 12/32 (37%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+L F D D +G I EL L S
Sbjct: 25 DNQELMEWFRAVDTDGSGAISVPELNAALSSA 56
Score = 33.0 bits (76), Expect = 0.61
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 11/38 (28%)
Query: 71 FVRMM---------FNIVDKDGDGRIS--FQEFLDTVV 97
+V + F D++ G+++ F F+ V
Sbjct: 151 YVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSV 188
Score = 33.0 bits (76), Expect = 0.61
Identities = 7/38 (18%), Positives = 15/38 (39%), Gaps = 11/38 (28%)
Query: 1214 FVRMM---------FNIVDKDGDGRIS--FQEFLDTVV 1240
+V + F D++ G+++ F F+ V
Sbjct: 151 YVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSV 188
>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria,
structural genomics consortium, SGC, transfe; 2.10A
{Plasmodium falciparum}
Length = 180
Score = 70.8 bits (174), Expect = 7e-14
Identities = 23/136 (16%), Positives = 52/136 (38%), Gaps = 19/136 (13%)
Query: 1355 SLSRAEFASAL-GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRII 1413
SLS E + L + + + +D + G I++ EF+ + L+
Sbjct: 55 SLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFM-AGCYRWKNIESTFLKAA 113
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-------DGMFQDAGLDS 1466
F+ D D +G I K ++ ++ L ++ + G+ ++ ++
Sbjct: 114 FNKIDKDEDGYISKSDIVSLVHDK-------VLDNNDIDNFFLSVHSIKKGIPREHIINK 166
Query: 1467 KDFLTYQDFKLMMRDY 1482
+++Q+FK M
Sbjct: 167 ---ISFQEFKDYMLST 179
Score = 62.7 bits (153), Expect = 5e-11
Identities = 18/103 (17%), Positives = 38/103 (36%), Gaps = 9/103 (8%)
Query: 1196 SLSRAEFASAL-GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRII 1254
SLS E + L + + + +D + G I++ EF+ + L+
Sbjct: 55 SLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFM-AGCYRWKNIESTFLKAA 113
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F+ D D +G I K ++ ++ L ++ +
Sbjct: 114 FNKIDKDEDGYISKSDIVSLVHDK-------VLDNNDIDNFFL 149
Score = 58.8 bits (143), Expect = 9e-10
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 53 SLSRAEFASAL-GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRII 111
SLS E + L + + + +D + G I++ EF+ + L+
Sbjct: 55 SLSHREIYTVLASVGIKKWDINRILQALDINDRGNITYTEFM-AGCYRWKNIESTFLKAA 113
Query: 112 FDMCDNDRNGVIDKGELAEMLRSL 135
F+ D D +G I K ++ ++
Sbjct: 114 FNKIDKDEDGYISKSDIVSLVHDK 137
Score = 55.8 bits (135), Expect = 1e-08
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 131
+F +D + +G +S +E VL S G + + I D + G I E +A
Sbjct: 42 NELFYKLDTNHNGSLSHREIYT--VLASVGIKKWDINRILQALDINDRGNITYTEFMAGC 99
Query: 132 LR 133
R
Sbjct: 100 YR 101
Score = 55.8 bits (135), Expect = 1e-08
Identities = 16/62 (25%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGE-LAEM 1274
+F +D + +G +S +E VL S G + + I D + G I E +A
Sbjct: 42 NELFYKLDTNHNGSLSHREIYT--VLASVGIKKWDINRILQALDINDRGNITYTEFMAGC 99
Query: 1275 LR 1276
R
Sbjct: 100 YR 101
Score = 50.8 bits (122), Expect = 7e-07
Identities = 27/166 (16%), Positives = 49/166 (29%), Gaps = 50/166 (30%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM--------- 1299
+ +F D + NG + E+ +L S+ + + ++ +
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASV-------GIKKWDINRILQALDINDRGNIT 91
Query: 1300 FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSR 1358
+ E M + L+ F D DE G +S+
Sbjct: 92 YT---EFMAGCYRWKNIESTFLKAAFN-----KI----------DKDEDG------YISK 127
Query: 1359 AEFASAL-GMKSDAVFVRMMFNIVDKDGDG--------RISFQEFL 1395
++ S + D + F V G +ISFQEF
Sbjct: 128 SDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFK 173
Score = 40.4 bits (95), Expect = 0.002
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 11/78 (14%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+ +F D + NG + E+ +L S+ + I+ + Q ++ +
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASV-------GIKKWD----INRILQALDINDR 87
Query: 1468 DFLTYQDFKLMMRDYKGD 1485
+TY +F +K
Sbjct: 88 GNITYTEFMAGCYRWKNI 105
Score = 35.0 bits (81), Expect = 0.12
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ +F D + NG + E+ +L S+
Sbjct: 39 KYINELFYKLDTNHNGSLSHREIYTVLASV 68
Score = 34.6 bits (80), Expect = 0.18
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 9/48 (18%)
Query: 55 SRAEFASAL-GMKSDAVFVRMMFNIVDKDGDG--------RISFQEFL 93
S+++ S + D + F V G +ISFQEF
Sbjct: 126 SKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFK 173
Score = 34.6 bits (80), Expect = 0.18
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 9/48 (18%)
Query: 1198 SRAEFASAL-GMKSDAVFVRMMFNIVDKDGDG--------RISFQEFL 1236
S+++ S + D + F V G +ISFQEF
Sbjct: 126 SKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQEFK 173
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal
binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Length = 158
Score = 69.5 bits (171), Expect = 1e-13
Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 26/141 (18%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---- 1405
+++ LG++ +R + + D G+G I F F F
Sbjct: 38 IILE----------VLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPE 87
Query: 1406 -TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
+ +LR F + D + NG I + E+L L E +L+ + +ID +
Sbjct: 88 QMQQELREAFRLYDKEGNGYISTDVMREILAELDE-----TLSSEDLDAMID----EIDA 138
Query: 1465 DSKDFLTYQDFKLMMRDYKGD 1485
D + +++F +M GD
Sbjct: 139 DGSGTVDFEEFMGVMT--GGD 157
Score = 62.6 bits (153), Expect = 4e-11
Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 20/112 (17%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---- 1246
+++ LG++ +R + + D G+G I F F F
Sbjct: 38 IILE----------VLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPE 87
Query: 1247 -TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ +LR F + D + NG I + E+L L E +L+ + +ID
Sbjct: 88 QMQQELREAFRLYDKEGNGYISTDVMREILAELDE-----TLSSEDLDAMID 134
Score = 56.8 bits (138), Expect = 3e-09
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 15/93 (16%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---- 103
+++ LG++ +R + + D G+G I F F F
Sbjct: 38 IILE----------VLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPE 87
Query: 104 -TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ +LR F + D + NG I + E+L L
Sbjct: 88 QMQQELREAFRLYDKEGNGYISTDVMREILAEL 120
Score = 55.3 bits (134), Expect = 1e-08
Identities = 26/154 (16%), Positives = 51/154 (33%), Gaps = 36/154 (23%)
Query: 1254 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM---------FQSPR 1304
F+ + G + ++ +L L T S + +LID F S +
Sbjct: 21 DFETPEGS--GRVSTDQIGIILEVLGIQ-----QTKSTIRQLIDEFDPFGNGDIDFDSFK 73
Query: 1305 ELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF--- 1361
+ ++ + REA+ L + + G +S
Sbjct: 74 IIGARFLGEEVNPEQMQQEL-REAFRL-YD---------KEGNG------YISTDVMREI 116
Query: 1362 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ L + + M + +D DG G + F+EF+
Sbjct: 117 LAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Score = 40.2 bits (95), Expect = 0.002
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
E + L + + M + +D DG G + F+EF+
Sbjct: 115 EILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Score = 40.2 bits (95), Expect = 0.002
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
E + L + + M + +D DG G + F+EF+
Sbjct: 115 EILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 150
Score = 39.9 bits (94), Expect = 0.002
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 73 RMMFNIVDK-DGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-L 128
F + +G GR+S + ++L G T+ +R + D D NG ID
Sbjct: 16 ETAFRDFETPEGSGRVSTDQI--GIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFK 73
Query: 129 AEMLRSLVE 137
R L E
Sbjct: 74 IIGARFLGE 82
Score = 38.3 bits (90), Expect = 0.006
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
F + DK+G+G IS + + + + L + D D D +G +D E ++
Sbjct: 97 FRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
Score = 38.3 bits (90), Expect = 0.006
Identities = 14/59 (23%), Positives = 26/59 (44%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
F + DK+G+G IS + + + + L + D D D +G +D E ++
Sbjct: 97 FRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
Score = 36.4 bits (85), Expect = 0.030
Identities = 10/67 (14%), Positives = 23/67 (34%), Gaps = 11/67 (16%)
Query: 1413 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTY 1472
F+ + G + ++ +L L T S + +LI + + +
Sbjct: 21 DFETPEGS--GRVSTDQIGIILEVLGIQ-----QTKSTIRQLI----DEFDPFGNGDIDF 69
Query: 1473 QDFKLMM 1479
FK++
Sbjct: 70 DSFKIIG 76
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide
compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB:
3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Length = 143
Score = 68.6 bits (169), Expect = 2e-13
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 20/132 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTED 1408
V MR ALG + ++ M + +DK+G G+++F +FL + S T++
Sbjct: 30 VAMR----------ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKE 79
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
++ F + D+D G I L + + L E +LTD E + M +A D
Sbjct: 80 EILKAFKLFDDDETGKISFKNLKRVAKELGE-----NLTD----EELQEMIDEADRDGDG 130
Query: 1469 FLTYQDFKLMMR 1480
++ Q+F +M+
Sbjct: 131 EVSEQEFLRIMK 142
Score = 59.8 bits (146), Expect = 2e-10
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTED 1249
V MR ALG + ++ M + +DK+G G+++F +FL + S T++
Sbjct: 30 VAMR----------ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKE 79
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
++ F + D+D G I L + + L E +LTD ++ E+ID
Sbjct: 80 EILKAFKLFDDDETGKISFKNLKRVAKELGE-----NLTDEELQEMID 122
Score = 58.6 bits (143), Expect = 5e-10
Identities = 40/185 (21%), Positives = 68/185 (36%), Gaps = 60/185 (32%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
R F++ D DG G I +E V + + G +++++ + D + G ++ G+
Sbjct: 9 REAFDLFDADGTGTIDVKEL--KVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
+ M + S D++ E++ A F+ F
Sbjct: 67 V------MTQKMSEKDTK------------EEILKA---------------FKL-----F 88
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRIS 1390
DDETG +S A LG ++ M + D+DGDG +S
Sbjct: 89 D---------DDETG------KISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVS 133
Query: 1391 FQEFL 1395
QEFL
Sbjct: 134 EQEFL 138
Score = 54.0 bits (131), Expect = 2e-08
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTED 106
V MR ALG + ++ M + +DK+G G+++F +FL + S T++
Sbjct: 30 VAMR----------ALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKE 79
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++ F + D+D G I L + + L
Sbjct: 80 EILKAFKLFDDDETGKISFKNLKRVAKEL 108
Score = 45.2 bits (108), Expect = 2e-05
Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
R F++ D DG G I +E V + + G +++++ + D + G ++ G+ L
Sbjct: 9 REAFDLFDADGTGTIDVKEL--KVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLT 66
Query: 130 EMLRSLVEM 138
M + + E
Sbjct: 67 VMTQKMSEK 75
Score = 41.3 bits (98), Expect = 6e-04
Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 12/77 (15%)
Query: 1406 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
TE++ +R FD+ D D G ID EL +R+L ++ ++I +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFE-----PKKEEIKKMI----SEI 51
Query: 1463 GLDSKDFLTYQDFKLMM 1479
+ + + DF +M
Sbjct: 52 DKEGTGKMNFGDFLTVM 68
Score = 39.8 bits (94), Expect = 0.002
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 60 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
A LG ++ M + D+DGDG +S QEFL
Sbjct: 105 AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Score = 39.8 bits (94), Expect = 0.002
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 1203 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
A LG ++ M + D+DGDG +S QEFL
Sbjct: 105 AKELGENLTDEELQEMIDEADRDGDGEVSEQEFL 138
Score = 38.2 bits (90), Expect = 0.007
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F + D D G+ISF+ V G T+++L+ + D D D +G + + E +++
Sbjct: 85 FKLFDDDETGKISFKNLKR--VAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142
Score = 38.2 bits (90), Expect = 0.007
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F + D D G+ISF+ V G T+++L+ + D D D +G + + E +++
Sbjct: 85 FKLFDDDETGKISFKNLKR--VAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK 142
Score = 34.4 bits (80), Expect = 0.13
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Query: 104 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
TE++ +R FD+ D D G ID EL +R+L
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRAL 35
>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure
initiative, southeast collaboratory for structural
genomics, secsg; 2.00A {Beroe abyssicola}
Length = 208
Score = 70.6 bits (173), Expect = 2e-13
Identities = 17/120 (14%), Positives = 40/120 (33%), Gaps = 22/120 (18%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-----------TEDKLRIIFDMCDNDRN 1422
VR+ F + + +++++ +F+ +D+ D+D +
Sbjct: 83 VRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGD 142
Query: 1423 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482
G +D EL M+++ + F+ A D L + + R +
Sbjct: 143 GTVDVDELKTMMKAF-------DVPQEAAYT----FFEKADTDKSGKLERTELVHLFRKF 191
Score = 64.5 bits (157), Expect = 2e-11
Identities = 25/164 (15%), Positives = 49/164 (29%), Gaps = 31/164 (18%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSP----- 1303
+L FD D D +G ++ E+ + ++ T ++ + + F
Sbjct: 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95
Query: 1304 --------RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRT 1354
E AE R+++ E + ++ D D G V
Sbjct: 96 NGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSY------YDVLDDDGDGTV---- 145
Query: 1355 SLSRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
E + + +A F D D G++ E +
Sbjct: 146 --DVDELKTMMKAFDVPQEAA--YTFFEKADTDKSGKLERTELV 185
Score = 60.6 bits (147), Expect = 4e-10
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 43 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 102
++ E + + E A+ ++++D DGDG + E ++ +
Sbjct: 101 EDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDEL--KTMMKAFD 158
Query: 103 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
++ F+ D D++G +++ EL + R
Sbjct: 159 VPQEAAYTFFEKADTDKSGKLERTELVHLFR 189
Score = 60.6 bits (147), Expect = 4e-10
Identities = 16/91 (17%), Positives = 38/91 (41%), Gaps = 2/91 (2%)
Query: 1186 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1245
++ E + + E A+ ++++D DGDG + E ++ +
Sbjct: 101 EDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGDGTVDVDEL--KTMMKAFD 158
Query: 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
++ F+ D D++G +++ EL + R
Sbjct: 159 VPQEAAYTFFEKADTDKSGKLERTELVHLFR 189
Score = 59.1 bits (143), Expect = 1e-09
Identities = 12/94 (12%), Positives = 32/94 (34%), Gaps = 18/94 (19%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-----------TEDKLRIIFDMCDNDRN 1263
VR+ F + + +++++ +F+ +D+ D+D +
Sbjct: 83 VRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGD 142
Query: 1264 GVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
G +D EL M+++ + +
Sbjct: 143 GTVDVDELKTMMKAF-------DVPQEAAYTFFE 169
Score = 57.1 bits (138), Expect = 7e-09
Identities = 12/75 (16%), Positives = 30/75 (40%), Gaps = 11/75 (14%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-----------TEDKLRIIFDMCDNDRN 120
VR+ F + + +++++ +F+ +D+ D+D +
Sbjct: 83 VRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDGD 142
Query: 121 GVIDKGELAEMLRSL 135
G +D EL M+++
Sbjct: 143 GTVDVDELKTMMKAF 157
Score = 49.8 bits (119), Expect = 2e-06
Identities = 13/78 (16%), Positives = 31/78 (39%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+L FD D D +G ++ E+ + ++ T ++ + + F G++
Sbjct: 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95
Query: 1468 DFLTYQDFKLMMRDYKGD 1485
+ L +D+ R +
Sbjct: 96 NGLLREDWVEANRVFAEA 113
Score = 44.4 bits (105), Expect = 1e-04
Identities = 15/77 (19%), Positives = 26/77 (33%), Gaps = 9/77 (11%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTV--VLFSRGHTE-------DKLRIIFDMCDNDRNGVI 123
F+ D D DG++ E L + T+ D +R+ F + +
Sbjct: 39 YKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGL 98
Query: 124 DKGELAEMLRSLVEMAR 140
+ + E R E R
Sbjct: 99 LREDWVEANRVFAEAER 115
Score = 35.2 bits (81), Expect = 0.14
Identities = 14/127 (11%), Positives = 37/127 (29%), Gaps = 18/127 (14%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIVLRGYYSYGN 165
+L FD D D +G ++ E+ + ++ + V++
Sbjct: 36 SRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHKGVEPV 95
Query: 166 SLDNIDL--YIGGM-------LESHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFT 216
+ + ++ E P ++ + + D D +G
Sbjct: 96 --NGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSYYDVLDDDG-------DGTVD 146
Query: 217 AAEVEAI 223
E++ +
Sbjct: 147 VDELKTM 153
>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium
binding protein, apoptosis, calcium, endoplasmic
reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB:
2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A
Length = 172
Score = 69.6 bits (171), Expect = 2e-13
Identities = 21/106 (19%), Positives = 42/106 (39%), Gaps = 15/106 (14%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
VR + ++ D++ ++F EF ++ + +F D D +G+IDK EL +
Sbjct: 46 VRSIISMFDRENKAGVNFSEF---TGVWKY---ITDWQNVFRTYDRDNSGMIDKNELKQA 99
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
L L+D + D + + + + + DF
Sbjct: 100 LSGFGY-----RLSD----QFHDILIRKFDRQGRGQIAFDDFIQGC 136
Score = 61.1 bits (149), Expect = 2e-10
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
VR + ++ D++ ++F EF ++ + +F D D +G+IDK EL +
Sbjct: 46 VRSIISMFDRENKAGVNFSEF---TGVWKY---ITDWQNVFRTYDRDNSGMIDKNELKQA 99
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
L L+D LI
Sbjct: 100 LSGFGY-----RLSDQFHDILIR 117
Score = 59.6 bits (145), Expect = 5e-10
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
VR + ++ D++ ++F EF ++ + +F D D +G+IDK EL +
Sbjct: 46 VRSIISMFDRENKAGVNFSEF---TGVWKY---ITDWQNVFRTYDRDNSGMIDKNELKQA 99
Query: 132 LRSL 135
L
Sbjct: 100 LSGF 103
Score = 57.6 bits (140), Expect = 2e-09
Identities = 38/191 (19%), Positives = 63/191 (32%), Gaps = 52/191 (27%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM-------- 1299
+ L +F D DR+GVI EL + L + T V +I
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNG----TWTPFNPVTVRSIISMFDRENKAGV 61
Query: 1300 -FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLS 1357
F + + ++ FR D D +G +
Sbjct: 62 NFSEFTGVW--------KYITDWQNVFR---------------TYDRDNSG------MID 92
Query: 1358 RAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIF 1414
+ E AL G + F ++ D+ G G+I+F +F+ + +L IF
Sbjct: 93 KNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VLQRLTDIF 146
Query: 1415 DMCDNDRNGVI 1425
D D++G I
Sbjct: 147 RRYDTDQDGWI 157
Score = 47.6 bits (114), Expect = 5e-06
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVV--LFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 128
F+ +F VDKD G IS E L + +R I M D + ++ E
Sbjct: 8 FLWNVFQRVDKDRSGVISDTE-LQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 129 AEMLRSLVEM 138
+ + + +
Sbjct: 67 TGVWKYITDW 76
Score = 47.6 bits (114), Expect = 5e-06
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 3/70 (4%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVV--LFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1271
F+ +F VDKD G IS E L + +R I M D + ++ E
Sbjct: 8 FLWNVFQRVDKDRSGVISDTE-LQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEF 66
Query: 1272 AEMLRSLVEM 1281
+ + + +
Sbjct: 67 TGVWKYITDW 76
Score = 44.2 bits (105), Expect = 9e-05
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
+ + E AL G + F ++ D+ G G+I+F +F+ + +L
Sbjct: 90 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VLQRLT 143
Query: 110 IIFDMCDNDRNGVI 123
IF D D++G I
Sbjct: 144 DIFRRYDTDQDGWI 157
Score = 44.2 bits (105), Expect = 9e-05
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 9/74 (12%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
+ + E AL G + F ++ D+ G G+I+F +F+ + +L
Sbjct: 90 MIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCI------VLQRLT 143
Query: 1253 IIFDMCDNDRNGVI 1266
IF D D++G I
Sbjct: 144 DIFRRYDTDQDGWI 157
Score = 38.4 bits (90), Expect = 0.009
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
+ L +F D DR+GVI EL + L + T V +I MF D ++
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNG----TWTPFNPVTVRSIIS-MF-DR--EN 57
Query: 1467 KDFLTYQDFKLMMR 1480
K + + +F + +
Sbjct: 58 KAGVNFSEFTGVWK 71
Score = 35.7 bits (83), Expect = 0.068
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ +F D+D G I E L G+ ++ I+ D G I + +
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQ--ALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 134
Query: 131 MLRSLVEM 138
L +
Sbjct: 135 GCIVLQRL 142
Score = 35.7 bits (83), Expect = 0.068
Identities = 13/68 (19%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ +F D+D G I E L G+ ++ I+ D G I + +
Sbjct: 77 QNVFRTYDRDNSGMIDKNELKQ--ALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 134
Query: 1274 MLRSLVEM 1281
L +
Sbjct: 135 GCIVLQRL 142
Score = 33.8 bits (78), Expect = 0.25
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ L +F D DR+GVI EL + L +
Sbjct: 6 QSFLWNVFQRVDKDRSGVISDTELQQALSNG 36
Score = 30.7 bits (70), Expect = 2.6
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 11/37 (29%)
Query: 71 FVRMM---------FNIVDKDGDGRISF--QEFLDTV 96
F++ F D D DG I +++L V
Sbjct: 132 FIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 168
Score = 30.7 bits (70), Expect = 2.6
Identities = 9/37 (24%), Positives = 14/37 (37%), Gaps = 11/37 (29%)
Query: 1214 FVRMM---------FNIVDKDGDGRISF--QEFLDTV 1239
F++ F D D DG I +++L V
Sbjct: 132 FIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV 168
>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light
chain, cell cycle protein; 1.65A {Saccharomyces
cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A
2fce_A
Length = 148
Score = 68.8 bits (169), Expect = 2e-13
Identities = 21/137 (15%), Positives = 47/137 (34%), Gaps = 26/137 (18%)
Query: 1350 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----- 1403
+R A+G ++ + ++ ++ + + + +
Sbjct: 28 DYLR----------AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDAT 77
Query: 1404 -GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
+ F + D + G + G+L ML L E LTD++V D + +
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE-----KLTDAEV----DELLKGV 128
Query: 1463 GLDSKDFLTYQDFKLMM 1479
+DS + Y+ F +
Sbjct: 129 EVDSNGEIDYKKFIEDV 145
Score = 61.5 bits (150), Expect = 6e-11
Identities = 19/115 (16%), Positives = 40/115 (34%), Gaps = 22/115 (19%)
Query: 1191 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----- 1244
+R A+G ++ + ++ ++ + + + +
Sbjct: 28 DYLR----------AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDAT 77
Query: 1245 -GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
+ F + D + G + G+L ML L E LTD++V EL+ G
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGE-----KLTDAEVDELLKG 127
Score = 58.0 bits (141), Expect = 1e-09
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 34/158 (21%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM----------F 1300
+ IF + D G I K L + LR++ T+ V ++I+
Sbjct: 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYN-----PTNQLVQDIINADSSLRDASSLTL 60
Query: 1301 QSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAE 1360
L+ + + K F +A+ + F + TG+V S +
Sbjct: 61 DQITGLIEVNEKELDATTKAKTEDFVKAFQV-FD---------KESTGKV------SVGD 104
Query: 1361 F---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ LG K V + V+ D +G I +++F+
Sbjct: 105 LRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
Score = 55.3 bits (134), Expect = 9e-09
Identities = 11/95 (11%), Positives = 29/95 (30%), Gaps = 17/95 (17%)
Query: 48 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----- 101
+R A+G ++ + ++ ++ + + + +
Sbjct: 28 DYLR----------AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDAT 77
Query: 102 -GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D + G + G+L ML L
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGL 112
Score = 39.9 bits (94), Expect = 0.002
Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ IF + D G I K L + LR++ T+ V ++I+ D+ L
Sbjct: 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYN-----PTNQLVQDIIN---ADSSLRDASS 57
Query: 1470 LTYQDFKLMM 1479
LT ++
Sbjct: 58 LTLDQITGLI 67
Score = 39.1 bits (92), Expect = 0.004
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
F + DK+ G++S + +L G T+ ++ + + D NG ID + E
Sbjct: 86 VKAFQVFDKESTGKVSVGDLRY--MLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 143
Query: 131 MLRS 134
+
Sbjct: 144 DVLR 147
Score = 39.1 bits (92), Expect = 0.004
Identities = 14/64 (21%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F + DK+ G++S + +L G T+ ++ + + D NG ID + E
Sbjct: 86 VKAFQVFDKESTGKVSVGDLRY--MLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 143
Query: 1274 MLRS 1277
+
Sbjct: 144 DVLR 147
Score = 37.6 bits (88), Expect = 0.012
Identities = 18/94 (19%), Positives = 35/94 (37%), Gaps = 19/94 (20%)
Query: 1146 ELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF--- 1202
L+ + + K F +A+ + F + TG+V S +
Sbjct: 65 GLIEVNEKELDATTKAKTEDFVKAFQV-FD---------KESTGKV------SVGDLRYM 108
Query: 1203 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ LG K V + V+ D +G I +++F+
Sbjct: 109 LTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
Score = 36.0 bits (84), Expect = 0.033
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 5/60 (8%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLR-IIFDMCDNDRNGVIDKGELAEML 132
F + DK G G I+ D L + G+ T ++ II + ++ ++
Sbjct: 10 FTLFDKKGQGAIAKDSLGD--YLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLI 67
Score = 36.0 bits (84), Expect = 0.038
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 3/42 (7%)
Query: 55 SRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
S + + LG K V + V+ D +G I +++F+
Sbjct: 101 SVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 142
Score = 34.5 bits (80), Expect = 0.13
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ IF + D G I K L + LR++
Sbjct: 6 NKDIFTLFDKKGQGAIAKDSLGDYLRAI 33
>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural
genomics, structural genomics CONS SGC; 2.00A {Plasmodium
falciparum K1}
Length = 197
Score = 70.3 bits (173), Expect = 2e-13
Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 9/108 (8%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ + +D + G+I + +FL + ++ I F D D NG I EL +
Sbjct: 95 IHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRI 154
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD-FLTYQDFKLMMR 1480
+ + + + ID + Q+ L+ D + + +F LMM
Sbjct: 155 FGR-------DDIENPLIDKAIDSLLQEVDLN-GDGEIDFHEFMLMMS 194
Score = 62.6 bits (153), Expect = 6e-11
Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ + +D + G+I + +FL + ++ I F D D NG I EL +
Sbjct: 95 IHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRI 154
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
L D + L+
Sbjct: 155 FG---RDDIENPLIDKAIDSLLQ 174
Score = 60.3 bits (147), Expect = 4e-10
Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 55/181 (30%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+F +D D G +S QE L L G+ + + D++ +G I +
Sbjct: 62 IFIALDVDNSGTLSSQEIL--DGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTD----- 114
Query: 1276 RSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGL 1335
F L + +++ F+ F
Sbjct: 115 ------------------------F-----LAATIDKQTYLKKEVCLIPFKF-----F-- 138
Query: 1336 KPGEKRRRD-DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEF 1394
D D G++ L R + + + VD +GDG I F EF
Sbjct: 139 --------DIDGNGKI-SVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
Query: 1395 L 1395
+
Sbjct: 190 M 190
Score = 59.1 bits (144), Expect = 1e-09
Identities = 14/62 (22%), Positives = 25/62 (40%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ + +D + G+I + +FL + ++ I F D D NG I EL +
Sbjct: 95 IHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRI 154
Query: 132 LR 133
Sbjct: 155 FG 156
Score = 48.0 bits (115), Expect = 6e-06
Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LAEM 131
+F +D D G +S QE L L G+ + + D++ +G I + LA
Sbjct: 62 IFIALDVDNSGTLSSQEIL--DGLKKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAAT 119
Query: 132 LR 133
+
Sbjct: 120 ID 121
Score = 44.9 bits (107), Expect = 8e-05
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F D DG+G+IS +E + + + + D + +G ID E M+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Score = 44.9 bits (107), Expect = 8e-05
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F D DG+G+IS +E + + + + D + +G ID E M+
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMS 194
Score = 41.4 bits (98), Expect = 0.001
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L R + + + VD +GDG I F EF+
Sbjct: 151 LKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
Score = 41.4 bits (98), Expect = 0.001
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L R + + + VD +GDG I F EF+
Sbjct: 151 LKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
Score = 39.5 bits (93), Expect = 0.005
Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 9/72 (12%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+ LR IF D D +G + E+ + L+ + + +++ +D ++
Sbjct: 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKI-----GYQKIPPDIHQVL----RDIDSNAS 107
Query: 1468 DFLTYQDFKLMM 1479
+ Y DF
Sbjct: 108 GQIHYTDFLAAT 119
Score = 32.6 bits (75), Expect = 0.79
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ LR IF D D +G + E+ + L+ +
Sbjct: 57 NNLRNIFIALDVDNSGTLSSQEILDGLKKI 86
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle,
cell division, mitosis, MR transport, nuclear pore
complex, nucleus, phosphoprotein; 2.50A {Saccharomyces
cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A
Length = 161
Score = 68.3 bits (168), Expect = 3e-13
Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 20/133 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1408
V M+ ALG + + + + D +G + + +F + D
Sbjct: 47 VAMK----------ALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLD 96
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
+++ F + D+D G I L + + L E +LTD E + M ++ LD
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGE-----TLTD----EELRAMIEEFDLDGDG 147
Query: 1469 FLTYQDFKLMMRD 1481
+ +F + D
Sbjct: 148 EINENEFIAICTD 160
Score = 60.3 bits (147), Expect = 2e-10
Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1249
V M+ ALG + + + + D +G + + +F + D
Sbjct: 47 VAMK----------ALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLD 96
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+++ F + D+D G I L + + L E +LTD ++ +I+
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKELGE-----TLTDEELRAMIE 139
Score = 56.4 bits (137), Expect = 5e-09
Identities = 33/185 (17%), Positives = 56/185 (30%), Gaps = 60/185 (32%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F++ D + DG + + E V + + G + ++ + D D++ ++ +
Sbjct: 26 YEAFSLFDMNNDGFLDYHEL--KVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI 83
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
+ M D E+ A F+ F
Sbjct: 84 V------MGEKILKRDPL------------DEIKRA---------------FQL-----F 105
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRIS 1390
DD TG +S A LG +R M D DGDG I+
Sbjct: 106 D---------DDHTG------KISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEIN 150
Query: 1391 FQEFL 1395
EF+
Sbjct: 151 ENEFI 155
Score = 54.9 bits (133), Expect = 2e-08
Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
V M+ ALG + + + + D +G + + +F + D
Sbjct: 47 VAMK----------ALGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLD 96
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+++ F + D+D G I L + + L
Sbjct: 97 EIKRAFQLFDDDHTGKISIKNLRRVAKEL 125
Score = 44.5 bits (106), Expect = 7e-05
Identities = 10/69 (14%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
F++ D + DG + + E V + + G + ++ + D D++ ++ +
Sbjct: 26 YEAFSLFDMNNDGFLDYHEL--KVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFYI 83
Query: 130 EMLRSLVEM 138
M +++
Sbjct: 84 VMGEKILKR 92
Score = 42.9 bits (102), Expect = 2e-04
Identities = 14/70 (20%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F + D + +G +D EL +++L L ++ +LI + + +
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKALGFE-----LPKREILDLI----DEYDSEGRHL 75
Query: 1470 LTYQDFKLMM 1479
+ Y DF ++M
Sbjct: 76 MKYDDFYIVM 85
Score = 38.7 bits (91), Expect = 0.005
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
A LG +R M D DGDG I+ EF+
Sbjct: 120 RVAKELGETLTDEELRAMIEEFDLDGDGEINENEFI 155
Score = 38.7 bits (91), Expect = 0.005
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
A LG +R M D DGDG I+ EF+
Sbjct: 120 RVAKELGETLTDEELRAMIEEFDLDGDGEINENEFI 155
Score = 37.9 bits (89), Expect = 0.010
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ F + D D G+IS + V G T+++LR + + D D +G I++ E
Sbjct: 99 KRAFQLFDDDHTGKISIKNLRR--VAKELGETLTDEELRAMIEEFDLDGDGEINENEFIA 156
Query: 131 MLRS 134
+
Sbjct: 157 ICTD 160
Score = 37.9 bits (89), Expect = 0.010
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + D D G+IS + V G T+++LR + + D D +G I++ E
Sbjct: 99 KRAFQLFDDDHTGKISIKNLRR--VAKELGETLTDEELRAMIEEFDLDGDGEINENEFIA 156
Query: 1274 MLRS 1277
+
Sbjct: 157 ICTD 160
Score = 35.2 bits (82), Expect = 0.074
Identities = 7/28 (25%), Positives = 15/28 (53%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D + +G +D EL +++L
Sbjct: 25 IYEAFSLFDMNNDGFLDYHELKVAMKAL 52
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C*
1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C
3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z
2otg_C* 2os8_C* 3pn7_C ...
Length = 156
Score = 68.0 bits (167), Expect = 4e-13
Identities = 31/132 (23%), Positives = 47/132 (35%), Gaps = 20/132 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTE 1407
V R LG+ V + K G+ + F+EFL ++ T
Sbjct: 35 DVCR----------CLGINPRNEDVFAVGG-THKMGEKSLPFEEFLPAYEGLMDCEQGTF 83
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
F D + G I EL +L +L E L+D V E+I D D +
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGE-----RLSDEDVDEIIKLT--DLQEDLE 136
Query: 1468 DFLTYQDFKLMM 1479
+ Y+DF +
Sbjct: 137 GNVKYEDFVKKV 148
Score = 59.9 bits (146), Expect = 2e-10
Identities = 26/109 (23%), Positives = 38/109 (34%), Gaps = 18/109 (16%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTE 1248
V R LG+ V + K G+ + F+EFL ++ T
Sbjct: 35 DVCR----------CLGINPRNEDVFAVGG-THKMGEKSLPFEEFLPAYEGLMDCEQGTF 83
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
F D + G I EL +L +L E L+D V E+I
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGE-----RLSDEDVDEIIK 127
Score = 53.7 bits (130), Expect = 4e-08
Identities = 20/90 (22%), Positives = 30/90 (33%), Gaps = 13/90 (14%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTE 105
V R LG+ V + K G+ + F+EFL ++ T
Sbjct: 35 DVCR----------CLGINPRNEDVFAVGG-THKMGEKSLPFEEFLPAYEGLMDCEQGTF 83
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F D + G I EL +L +L
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTAL 113
Score = 39.1 bits (92), Expect = 0.003
Identities = 28/167 (16%), Positives = 59/167 (35%), Gaps = 43/167 (25%)
Query: 1247 TEDK---LRIIFDMCDN--DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTEL--IDGM 1299
++D+ L+ +F++ D R+G +D +L ++ R L + V + M
Sbjct: 4 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-----PRNEDVFAVGGTHKM 58
Query: 1300 ------FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMR 1353
F+ + + F+ TF + G +
Sbjct: 59 GEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFK-----TF---------DREGQGFI--- 101
Query: 1354 TSLSRAEF---ASALGMKSDAVFVRMMFNIVD--KDGDGRISFQEFL 1395
S AE +ALG + V + + D +D +G + +++F+
Sbjct: 102 ---SGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 32.1 bits (74), Expect = 0.72
Identities = 8/64 (12%), Positives = 17/64 (26%), Gaps = 7/64 (10%)
Query: 73 RMMFNIVD--KDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGEL 128
+ +F + D DG + + D V G + + + + E
Sbjct: 12 KDVFELFDFWDGRDGAVDAFKLGD--VCRCLGINPRNEDVFAVGGT-HKMGEKSLPFEEF 68
Query: 129 AEML 132
Sbjct: 69 LPAY 72
Score = 32.1 bits (74), Expect = 0.96
Identities = 13/79 (16%), Positives = 31/79 (39%), Gaps = 15/79 (18%)
Query: 1406 TEDK---LRIIFDMCDN--DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1460
++D+ L+ +F++ D R+G +D +L ++ R L + V +
Sbjct: 4 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGIN-----PRNEDVFAVGG---T 55
Query: 1461 DAGLDSKDFLTYQDFKLMM 1479
+ L +++F
Sbjct: 56 HK--MGEKSLPFEEFLPAY 72
Score = 31.4 bits (72), Expect = 1.6
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 42 DDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVD--KDGDGRISFQEFL 93
+ G + S AE +ALG + V + + D +D +G + +++F+
Sbjct: 95 REGQGFI------SGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 31.4 bits (72), Expect = 1.6
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 11/57 (19%)
Query: 1185 DDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVD--KDGDGRISFQEFL 1236
+ G + S AE +ALG + V + + D +D +G + +++F+
Sbjct: 95 REGQGFI------SGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFV 145
Score = 30.2 bits (69), Expect = 3.4
Identities = 10/37 (27%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query: 104 TEDK---LRIIFDMCDN--DRNGVIDKGELAEMLRSL 135
++D+ L+ +F++ D R+G +D +L ++ R L
Sbjct: 4 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCL 40
>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal
binding protein; NMR {Entamoeba histolytica} SCOP:
a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A
Length = 134
Score = 67.2 bits (165), Expect = 5e-13
Identities = 18/109 (16%), Positives = 40/109 (36%), Gaps = 16/109 (14%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSR---GHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
++++F +D DG+G I EF + L++++ + D D +G + K E+
Sbjct: 38 LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
Query: 1431 AEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+ E + A + ++T ++F
Sbjct: 98 TSFFKKHGI-------------EKVAEQVMKADANGDGYITLEEFLEFS 133
Score = 65.2 bits (160), Expect = 2e-12
Identities = 35/184 (19%), Positives = 58/184 (31%), Gaps = 58/184 (31%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 1272
+F +D +GDG +S++E + + E L++IF D D NG ID+ E A
Sbjct: 2 AEALFKEIDVNGDGAVSYEEV--KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Query: 1273 EMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALT 1332
+ + + + L+ ++
Sbjct: 60 KF------YGSI-------------------------QGQDLSDDKIGLKVLYK-----L 83
Query: 1333 FGLKPGEKRRRD-DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISF 1391
D D G L++ E S V D +GDG I+
Sbjct: 84 M----------DVDGDG------KLTKEEVTSFFKKHGIEK-VAEQVMKADANGDGYITL 126
Query: 1392 QEFL 1395
+EFL
Sbjct: 127 EEFL 130
Score = 59.5 bits (145), Expect = 2e-10
Identities = 14/67 (20%), Positives = 30/67 (44%), Gaps = 3/67 (4%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSR---GHTEDKLRIIFDMCDNDRNGVIDKGEL 128
++++F +D DG+G I EF + L++++ + D D +G + K E+
Sbjct: 38 LQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEV 97
Query: 129 AEMLRSL 135
+
Sbjct: 98 TSFFKKH 104
Score = 50.6 bits (122), Expect = 2e-07
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 129
+F +D +GDG +S++E + + E L++IF D D NG ID+ E A
Sbjct: 2 AEALFKEIDVNGDGAVSYEEV--KAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFA 59
Query: 130 EMLRSLVEMART 141
+ S+ +
Sbjct: 60 KFYGSIQGQDLS 71
Score = 41.0 bits (97), Expect = 5e-04
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 55 SRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
++ E S V D +GDG I+ +EFL
Sbjct: 93 TKEEVTSFFKKHGIEK-VAEQVMKADANGDGYITLEEFL 130
Score = 41.0 bits (97), Expect = 5e-04
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 1198 SRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
++ E S V D +GDG I+ +EFL
Sbjct: 93 TKEEVTSFFKKHGIEK-VAEQVMKADANGDGYITLEEFL 130
Score = 40.2 bits (95), Expect = 0.001
Identities = 7/70 (10%), Positives = 19/70 (27%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+F D + +G + E+ + + + +F+ D
Sbjct: 2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRA-----IKNEQLLQL----IFKSIDADGNGE 52
Query: 1470 LTYQDFKLMM 1479
+ +F
Sbjct: 53 IDQNEFAKFY 62
Score = 39.8 bits (94), Expect = 0.001
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
++++ ++D DGDG+++ +E + H +K+ D + +G I E E
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTS--FF--KKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133
Score = 39.8 bits (94), Expect = 0.001
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
++++ ++D DGDG+++ +E + H +K+ D + +G I E E
Sbjct: 78 KVLYKLMDVDGDGKLTKEEVTS--FF--KKHGIEKVAEQVMKADANGDGYITLEEFLEFS 133
>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP;
2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A
2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A*
1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A*
3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...
Length = 161
Score = 67.6 bits (166), Expect = 6e-13
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH 1405
VMR LG ++ M + VD+DG G + F EFL +V S+G
Sbjct: 43 KVMR----------MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E++L +F M D + +G ID EL ML++ E ++T+ + EL+ D +
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGE-----TITEDDIEELMK----DGDKN 143
Query: 1466 SKDFLTYQDFKLMMR 1480
+ + Y +F M+
Sbjct: 144 NDGRIDYDEFLEFMK 158
Score = 60.6 bits (148), Expect = 1e-10
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH 1246
VMR LG ++ M + VD+DG G + F EFL +V S+G
Sbjct: 43 KVMR----------MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+E++L +F M D + +G ID EL ML++ E ++T+ + EL+
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGE-----TITEDDIEELMK 138
Score = 56.4 bits (137), Expect = 5e-09
Identities = 39/186 (20%), Positives = 57/186 (30%), Gaps = 58/186 (31%)
Query: 1216 RMMFNIVDKDG-DGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ F+I DG IS +E V+ G T ++L+ + D D D +G +D E
Sbjct: 21 KAAFDIFVLGAEDGSISTKEL--GKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 1273 EMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALT 1332
M M R+ +E EL FR
Sbjct: 79 VM------MVRSMKDDSKGKSE---------EELSDL---------------FRM----- 103
Query: 1333 FGLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRI 1389
F + G + E A G + + DK+ DGRI
Sbjct: 104 FD---------KNADG------YIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRI 148
Query: 1390 SFQEFL 1395
+ EFL
Sbjct: 149 DYDEFL 154
Score = 54.9 bits (133), Expect = 1e-08
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH 103
VMR LG ++ M + VD+DG G + F EFL +V S+G
Sbjct: 43 KVMR----------MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGK 92
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+E++L +F M D + +G ID EL ML++
Sbjct: 93 SEEELSDLFRMFDKNADGYIDLEELKIMLQAT 124
Score = 39.8 bits (94), Expect = 0.003
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 73 RMMFNIVDKDG-DGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-L 128
+ F+I DG IS +E V+ G T ++L+ + D D D +G +D E L
Sbjct: 21 KAAFDIFVLGAEDGSISTKEL--GKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFL 78
Query: 129 AEMLRSLVE 137
M+RS+ +
Sbjct: 79 VMMVRSMKD 87
Score = 39.5 bits (93), Expect = 0.003
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F + DK+ DG I +E +L + G TED + + D + +G ID E E ++
Sbjct: 101 FRMFDKNADGYIDLEELKI--MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Query: 134 SL 135
+
Sbjct: 159 GV 160
Score = 39.5 bits (93), Expect = 0.003
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F + DK+ DG I +E +L + G TED + + D + +G ID E E ++
Sbjct: 101 FRMFDKNADGYIDLEELKI--MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Query: 1277 SL 1278
+
Sbjct: 159 GV 160
Score = 39.5 bits (93), Expect = 0.003
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
F + DK+ DG I +E +L + G TED + + D + +G ID E E ++
Sbjct: 101 FRMFDKNADGYIDLEELKI--MLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Query: 1436 SL 1437
+
Sbjct: 159 GV 160
Score = 39.1 bits (92), Expect = 0.004
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
A G + + DK+ DGRI + EFL
Sbjct: 119 IMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 39.1 bits (92), Expect = 0.004
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
A G + + DK+ DGRI + EFL
Sbjct: 119 IMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFL 154
Score = 36.4 bits (85), Expect = 0.036
Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 10/71 (14%)
Query: 1410 LRIIFDMCDNDRN-GVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
+ FD+ G I EL +++R L + T ++ E+I + D
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRMLGQN-----PTPEELQEMI----DEVDEDGSG 70
Query: 1469 FLTYQDFKLMM 1479
+ + +F +MM
Sbjct: 71 TVDFDEFLVMM 81
Score = 29.8 bits (68), Expect = 4.5
Identities = 8/29 (27%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 108 LRIIFDMCDNDRN-GVIDKGELAEMLRSL 135
+ FD+ G I EL +++R L
Sbjct: 20 FKAAFDIFVLGAEDGSISTKELGKVMRML 48
>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME
binding protein-toxin complex; 2.20A {Chlamydomonas
reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A
Length = 169
Score = 68.0 bits (167), Expect = 6e-13
Identities = 32/132 (24%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTED 1408
V MR ALG + ++ M + +DKDG G I F+EFL + + +
Sbjct: 52 VAMR----------ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE 101
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
++ F + D+D +G I +L + + L E +LT+ E + M +A + +
Sbjct: 102 EILKAFRLFDDDNSGTITIKDLRRVAKELGE-----NLTE----EELQEMIAEADRNDDN 152
Query: 1469 FLTYQDFKLMMR 1480
+ +F +M+
Sbjct: 153 EIDEDEFIRIMK 164
Score = 60.3 bits (147), Expect = 2e-10
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTED 1249
V MR ALG + ++ M + +DKDG G I F+EFL + + +
Sbjct: 52 VAMR----------ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE 101
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
++ F + D+D +G I +L + + L E +LT+ ++ E+I
Sbjct: 102 EILKAFRLFDDDNSGTITIKDLRRVAKELGE-----NLTEEELQEMIA 144
Score = 59.5 bits (145), Expect = 4e-10
Identities = 37/185 (20%), Positives = 62/185 (33%), Gaps = 60/185 (32%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
R F++ D DG G I +E V + + G +++++ + D D +G ID E
Sbjct: 31 REAFDLFDTDGSGTIDAKEL--KVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
M M DS+ E++ A FR F
Sbjct: 89 M------MTAKMGERDSR------------EEILKA---------------FRL-----F 110
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRIS 1390
DD +G +++ + A LG ++ M D++ D I
Sbjct: 111 D---------DDNSG------TITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEID 155
Query: 1391 FQEFL 1395
EF+
Sbjct: 156 EDEFI 160
Score = 54.5 bits (132), Expect = 2e-08
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF-SRGHTED 106
V MR ALG + ++ M + +DKDG G I F+EFL + + +
Sbjct: 52 VAMR----------ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSRE 101
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++ F + D+D +G I +L + + L
Sbjct: 102 EILKAFRLFDDDNSGTITIKDLRRVAKEL 130
Score = 44.9 bits (107), Expect = 4e-05
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
R F++ D DG G I +E V + + G +++++ + D D +G ID E L
Sbjct: 31 REAFDLFDTDGSGTIDAKEL--KVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLT 88
Query: 130 EMLRSLVEM 138
M + E
Sbjct: 89 MMTAKMGER 97
Score = 40.6 bits (96), Expect = 0.001
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+R FD+ D D +G ID EL +R+L ++ ++I + D
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRALGFE-----PKKEEIKKMI----SEIDKDGSGT 80
Query: 1470 LTYQDFKLMM 1479
+ +++F MM
Sbjct: 81 IDFEEFLTMM 90
Score = 40.3 bits (95), Expect = 0.002
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 60 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
A LG ++ M D++ D I EF+
Sbjct: 127 AKELGENLTEEELQEMIAEADRNDDNEIDEDEFI 160
Score = 40.3 bits (95), Expect = 0.002
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 1203 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
A LG ++ M D++ D I EF+
Sbjct: 127 AKELGENLTEEELQEMIAEADRNDDNEIDEDEFI 160
Score = 40.3 bits (95), Expect = 0.002
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F + D D G I+ ++ V G TE++L+ + D + + ID+ E +
Sbjct: 107 FRLFDDDNSGTITIKDLRR--VAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI-- 162
Query: 134 SLVEMARTSF 143
M +TS
Sbjct: 163 ----MKKTSL 168
Score = 38.3 bits (90), Expect = 0.007
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F + D D G I+ ++ V G TE++L+ + D + + ID+ E +
Sbjct: 107 FRLFDDDNSGTITIKDLRR--VAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI-- 162
Query: 1277 SLVEMARTT 1285
M +T+
Sbjct: 163 ----MKKTS 167
Score = 34.1 bits (79), Expect = 0.23
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+R FD+ D D +G ID EL +R+L
Sbjct: 30 IREAFDLFDTDGSGTIDAKELKVAMRAL 57
>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin;
EF-hands, calcium, metal binding protein; 2.17A {Bos
taurus} PDB: 2f2p_A
Length = 179
Score = 67.9 bits (167), Expect = 6e-13
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1408
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 35 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEE 84
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
++R F + D D NG I EL ++ +L E LTD +V E+I +A +D
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMIR----EADIDGDG 135
Query: 1469 FLTYQDFKLMMR 1480
+ Y++F MM
Sbjct: 136 QVNYEEFVQMMT 147
Score = 65.6 bits (161), Expect = 4e-12
Identities = 53/219 (24%), Positives = 77/219 (35%), Gaps = 64/219 (29%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F++ DKDGDG I+ +E V+ S G TE +L+ + + D D NG ID E
Sbjct: 14 KEAFSLFDKDGDGTITTKEL--GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
M MAR TDS+ E+ A FR F
Sbjct: 72 M------MARKMKDTDSE------------EEIREA---------------FRV-----F 93
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRIS 1390
D G + S AE + LG K V M D DGDG+++
Sbjct: 94 D---------KDGNGYI------SAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 138
Query: 1391 FQEFLDTVVLFSRGH----TEDKLRIIFDMCDNDRNGVI 1425
++EF+ + G ++ +R
Sbjct: 139 YEEFVQMMTAKGGGGGAAARKEVIRNKIRAIGKMARVFS 177
Score = 61.0 bits (149), Expect = 2e-10
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1249
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 35 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEE 84
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
++R F + D D NG I EL ++ +L E LTD +V E+I
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGE-----KLTDEEVDEMIR 127
Score = 54.8 bits (133), Expect = 3e-08
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 35 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEE 84
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++R F + D D NG I EL ++ +L
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNL 113
Score = 47.1 bits (113), Expect = 9e-06
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 60 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH----TEDKLRIIFDMC 115
+ LG K V M D DGDG+++++EF+ + G ++ +R
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAI 169
Query: 116 DNDRNGVI 123
Sbjct: 170 GKMARVFS 177
Score = 47.1 bits (113), Expect = 9e-06
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 1203 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH----TEDKLRIIFDMC 1258
+ LG K V M D DGDG+++++EF+ + G ++ +R
Sbjct: 110 MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKGGGGGAAARKEVIRNKIRAI 169
Query: 1259 DNDRNGVI 1266
Sbjct: 170 GKMARVFS 177
Score = 44.4 bits (106), Expect = 8e-05
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 5/69 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
+ F++ DKDGDG I+ +E V+ S G TE +L+ + + D D NG ID E L
Sbjct: 14 KEAFSLFDKDGDGTITTKEL--GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 71
Query: 130 EMLRSLVEM 138
M R + +
Sbjct: 72 MMARKMKDT 80
Score = 40.6 bits (96), Expect = 0.002
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F + D D +G I EL ++RSL + T++++ ++I + D
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI----NEVDADGNGT 63
Query: 1470 LTYQDFKLMM 1479
+ + +F MM
Sbjct: 64 IDFPEFLTMM 73
Score = 37.5 bits (88), Expect = 0.018
Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
F + DKDG+G IS E V+ + G T++++ + D D +G ++ E +M
Sbjct: 90 FRVFDKDGNGYISAAELRH--VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM-- 145
Query: 1436 SLVEMARTTSLTDSQVTE 1453
M + +
Sbjct: 146 ----MTAKGGGGGAAARK 159
Score = 37.5 bits (88), Expect = 0.019
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F + DKDG+G IS E V+ + G T++++ + D D +G ++ E +M+
Sbjct: 90 FRVFDKDGNGYISAAELRH--VMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147
Query: 134 S 134
+
Sbjct: 148 A 148
Score = 33.7 bits (78), Expect = 0.34
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D D +G I EL ++RSL
Sbjct: 13 FKEAFSLFDKDGDGTITTKELGTVMRSL 40
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A
1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A
2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Length = 162
Score = 67.2 bits (165), Expect = 8e-13
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH 1405
VMR LG + + VD+DG G I F+EFL +V ++G
Sbjct: 44 TVMR----------MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK 93
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+E++L F + D + +G ID EL E+LR+ E +T+ E I+ + +D+ +
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGE-----HVTE----EDIEDLMKDSDKN 144
Query: 1466 SKDFLTYQDFKLMMR 1480
+ + + +F MM
Sbjct: 145 NDGRIDFDEFLKMME 159
Score = 61.4 bits (150), Expect = 8e-11
Identities = 42/185 (22%), Positives = 58/185 (31%), Gaps = 57/185 (30%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F++ D DG G IS +E V+ G T+++L I + D D +G ID E
Sbjct: 23 KAAFDMFDADGGGDISTKEL--GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
M M R +E EL FR F
Sbjct: 81 M------MVRQMKEDAKGKSE---------EELANC---------------FRI-----F 105
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRIS 1390
+ G + E A G + + DK+ DGRI
Sbjct: 106 D---------KNADG------FIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRID 150
Query: 1391 FQEFL 1395
F EFL
Sbjct: 151 FDEFL 155
Score = 60.3 bits (147), Expect = 2e-10
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 19/111 (17%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH 1246
VMR LG + + VD+DG G I F+EFL +V ++G
Sbjct: 44 TVMR----------MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK 93
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+E++L F + D + +G ID EL E+LR+ E +T+ + +L+
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRATGE-----HVTEEDIEDLMK 139
Score = 54.5 bits (132), Expect = 2e-08
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF----SRGH 103
VMR LG + + VD+DG G I F+EFL +V ++G
Sbjct: 44 TVMR----------MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGK 93
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+E++L F + D + +G ID EL E+LR+
Sbjct: 94 SEEELANCFRIFDKNADGFIDIEELGEILRAT 125
Score = 44.1 bits (105), Expect = 7e-05
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ F++ D DG G IS +E V+ G T+++L I + D D +G ID E
Sbjct: 23 KAAFDMFDADGGGDISTKEL--GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 131 M 131
M
Sbjct: 81 M 81
Score = 40.6 bits (96), Expect = 0.001
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
E A G + + DK+ DGRI F EFL
Sbjct: 120 EILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 40.6 bits (96), Expect = 0.001
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
E A G + + DK+ DGRI F EFL
Sbjct: 120 EILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFL 155
Score = 39.5 bits (93), Expect = 0.003
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ FDM D D G I EL ++R L + T ++ +I ++ D
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQN-----PTKEELDAII----EEVDEDGSGT 72
Query: 1470 LTYQDFKLMM 1479
+ +++F +MM
Sbjct: 73 IDFEEFLVMM 82
Score = 38.3 bits (90), Expect = 0.008
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F I DK+ DG I +E + +L + G TE+ + + D + +G ID E +M+
Sbjct: 102 FRIFDKNADGFIDIEELGE--ILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 134 S 134
Sbjct: 160 G 160
Score = 38.3 bits (90), Expect = 0.008
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F I DK+ DG I +E + +L + G TE+ + + D + +G ID E +M+
Sbjct: 102 FRIFDKNADGFIDIEELGE--ILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 1277 S 1277
Sbjct: 160 G 160
Score = 38.3 bits (90), Expect = 0.008
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
F I DK+ DG I +E + +L + G TE+ + + D + +G ID E +M+
Sbjct: 102 FRIFDKNADGFIDIEELGE--ILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
Query: 1436 S 1436
Sbjct: 160 G 160
Score = 33.7 bits (78), Expect = 0.25
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ FDM D D G I EL ++R L
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRML 49
>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand;
1.75A {Physarum polycephalum}
Length = 142
Score = 66.7 bits (164), Expect = 9e-13
Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 21/131 (16%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1408
V++ G++ + MFN D G+G+I F EFL + + +ED
Sbjct: 30 TVLK----------QFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSED 79
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
LR F D + G I K L + L +L + L +
Sbjct: 80 ILRQAFRTFDPEGTGYIPKAALQDALLNLGD-----RLKP----HEFAEFLGITETEKGQ 130
Query: 1469 FLTYQDFKLMM 1479
Y +F M
Sbjct: 131 I-RYDNFINTM 140
Score = 61.7 bits (151), Expect = 4e-11
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1249
V++ G++ + MFN D G+G+I F EFL + + +ED
Sbjct: 30 TVLK----------QFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSED 79
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
LR F D + G I K L + L +L + L + E +
Sbjct: 80 ILRQAFRTFDPEGTGYIPKAALQDALLNLGD-----RLKPHEFAEFLG 122
Score = 55.6 bits (135), Expect = 7e-09
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
V++ G++ + MFN D G+G+I F EFL + + +ED
Sbjct: 30 TVLK----------QFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSED 79
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
LR F D + G I K L + L +L
Sbjct: 80 ILRQAFRTFDPEGTGYIPKAALQDALLNL 108
Score = 48.6 bits (117), Expect = 1e-06
Identities = 32/185 (17%), Positives = 49/185 (26%), Gaps = 61/185 (32%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + D + G I+ + VL G +F+ D NG I E
Sbjct: 9 KEAFELFDSERTGFITKEGL--QTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLS 66
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
M M R T S+ L A FR F
Sbjct: 67 M------MGRRMKQTTSE------------DILRQA---------------FRT-----F 88
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRIS 1390
+ TG + +A LG + I + + G+I
Sbjct: 89 D---------PEGTG------YIPKAALQDALLNLGDRLKPHEFAEFLGITETE-KGQIR 132
Query: 1391 FQEFL 1395
+ F+
Sbjct: 133 YDNFI 137
Score = 43.2 bits (103), Expect = 1e-04
Identities = 16/69 (23%), Positives = 26/69 (37%), Gaps = 5/69 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
+ F + D + G I+ + VL G +F+ D NG I E L+
Sbjct: 9 KEAFELFDSERTGFITKEGL--QTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLS 66
Query: 130 EMLRSLVEM 138
M R + +
Sbjct: 67 MMGRRMKQT 75
Score = 42.9 bits (102), Expect = 2e-04
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F++ D++R G I K L +L+ + + E+ +A
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQFGVR-----VEPAAFNEMF----NEADATGNGK 58
Query: 1470 LTYQDFKLMM 1479
+ + +F MM
Sbjct: 59 IQFPEFLSMM 68
Score = 35.9 bits (84), Expect = 0.035
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F++ D++R G I K L +L+
Sbjct: 8 FKEAFELFDSERTGFITKEGLQTVLKQF 35
Score = 31.3 bits (72), Expect = 1.4
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ LG + I + + G+I + F+
Sbjct: 103 DALLNLGDRLKPHEFAEFLGITETE-KGQIRYDNFI 137
Score = 31.3 bits (72), Expect = 1.4
Identities = 6/36 (16%), Positives = 13/36 (36%), Gaps = 1/36 (2%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ LG + I + + G+I + F+
Sbjct: 103 DALLNLGDRLKPHEFAEFLGITETE-KGQIRYDNFI 137
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 73.0 bits (178), Expect = 9e-13
Identities = 92/616 (14%), Positives = 185/616 (30%), Gaps = 149/616 (24%)
Query: 1153 ETRERRQ--KKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1210
ET E + K + F +A+ F K + D + LS+ E + K
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-----DMPKSI-----LSKEEIDHIIMSKD 59
Query: 1211 DAVFVRMMFNIVDKDGDGRISFQEFLDTVV------LFSRGHTEDK----LRIIF----D 1256
+F + + + Q+F++ V+ L S TE + + ++ D
Sbjct: 60 AVSGTLRLFWTLLSKQEEMV--QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 1257 MCDNDRNGVIDKG-----ELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQSPRELMLAK 1310
ND N V K + LR L+E+ ++ IDG+ S + +
Sbjct: 118 RLYND-NQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-------IDGVLGSGKTWVALD 169
Query: 1311 AETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370
K + + L + E M L + +SD
Sbjct: 170 V---CLSYKVQCKMDFKIFWLNLK-----NCNSPETVLE--MLQKLLY-QIDPNWTSRSD 218
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL 1430
NI + + + L S+ + E+ L ++ ++ + + L
Sbjct: 219 H-----SSNIKLRIHSIQAELRRL-----LKSKPY-ENCLLVLLNVQNAK---AWNAFNL 264
Query: 1431 AEMLRSLVEMARTTSLTDSQVTELIDG--------MFQDAGLDSKD-------FLTYQDF 1475
+ + L+ TT QVT+ + L + +L +
Sbjct: 265 S--CKILL----TTR--FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316
Query: 1476 KLMMRDYKGDFVAIGLDCKGAKQNFLDTSTNVARMTSFNIEPILDEDKSWFQLKLVPITT 1535
L + + + + ++ L T N + + I+ + S L+ P
Sbjct: 317 DLPREVLTTNPRRLSI-IAESIRDGLATWDNWKHVNCDKLTTII--ESSLNVLE--P--- 368
Query: 1536 FLEENRQNIFYLFIF--------YVITI----------ALFVERFIHYSFLAEHTD--LR 1575
E R+ L +F ++++ + V + YS + +
Sbjct: 369 --AEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTI 426
Query: 1576 HIMGQYIPLDSHI----QFHK-------IAACTALF-FSLIHTVGHIINF--YHVSTQPL 1621
I Y+ L + H+ I + + + +H+
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEH 486
Query: 1622 EHLHCLTAEVHFPSDYKPGITFWLFQTI--TGI----TGVLLFVIMVLIFVFAHPTIRKK 1675
L V D++ +L Q I +G +L + L F + I
Sbjct: 487 PERMTLFRMVFL--DFR-----FLEQKIRHDSTAWNASGSILNTLQQLKFYKPY--ICDN 537
Query: 1676 AYNWFWLAHSLYVFLF 1691
+ L +++ FL
Sbjct: 538 DPKYERLVNAILDFLP 553
Score = 66.0 bits (160), Expect = 1e-10
Identities = 100/693 (14%), Positives = 189/693 (27%), Gaps = 218/693 (31%)
Query: 1312 ETRERRQ--KKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKS 1369
ET E + K + F +A+ F K + D + LS+ E + K
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-----DMPKSI-----LSKEEIDHIIMSKD 59
Query: 1370 DAVFVRMMFNIVDKDGDGRISFQEFLDTVV------LFSRGHTEDK----LRIIF----D 1415
+F + + + Q+F++ V+ L S TE + + ++ D
Sbjct: 60 AVSGTLRLFWTLLSKQEEMV--QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD 117
Query: 1416 MCDNDRNGVIDKG-----ELAEMLRS-LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
ND N V K + LR L+E+ ++ IDG+ G K +
Sbjct: 118 RLYND-NQVFAKYNVSRLQPYLKLRQALLELRPAKNVL-------IDGV---LGS-GKTW 165
Query: 1470 LTYQDFKLMMRDYKGDFVAIGLDCKGAKQNFLDTSTNVARMTSFNIEPILDEDKSWFQLK 1529
+ + YK V F I W LK
Sbjct: 166 VALD----VCLSYK-----------------------VQCKMDFKI--------FWLNLK 190
Query: 1530 LVPITTFLEENRQNIFYLFIFYVITIALFVERFIHYSFLAEHTDLRHIMGQ------YIP 1583
+ E Q + Y + + I + +LR ++ +
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN-IKLRIHSIQAELRRLLKSKPYENCLLV 249
Query: 1584 LDSHIQFHKIAA-----CTALFFSLIHTVGHIINFYHVSTQPLEHLHCLTAEVHFPSDYK 1638
L ++Q K C L + V ++ + L+H + D
Sbjct: 250 LL-NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH-----SMTLTPDEV 303
Query: 1639 PGITFWLFQTITGITGVLLFVIMVLIFVFAHPTIRKKAYNWFWLAHSLYVFLFALMLIHG 1698
L L ++ +P S+ A + G
Sbjct: 304 KS----LLLKYLDCRPQDLPREVLTT----NP-----------RRLSI----IAESIRDG 340
Query: 1699 LARITGPPRFWIYFIGPGVVFILDKVVS------LRTKYMALDIL-ETELLPSDVIKI-- 1749
LA W + + I++ ++ R + L + + +P+ ++ +
Sbjct: 341 LATWD----NWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIW 396
Query: 1750 -------------RFYR-------PPNFTY--HSGQWVRLACTAFKNAAYHSFTLT---- 1783
+ ++ P T S + L A H +
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY-LELKVKLENEYALHRSIVDHYNI 455
Query: 1784 ---------SAPHE-----NFLSCHIKA--QGPWTWKLRN-YFDPCNFNASEDQPKIRLE 1826
P+ + + H+K R + D F + KIR +
Sbjct: 456 PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLD-FRFL----EQKIRHD 510
Query: 1827 GPFGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWICPS 1886
A G I + L L K Y +IC +
Sbjct: 511 ST-------------AWNASGSI-----LNTLQQL---------------KFYKPYICDN 537
Query: 1887 HKHFEWFIDVLRDVEKKDVTNVLEI-HIFITQF 1918
+E ++ + D K N++ + + +
Sbjct: 538 DPKYERLVNAILDFLPKIEENLICSKYTDLLRI 570
Score = 55.6 bits (133), Expect = 2e-07
Identities = 102/670 (15%), Positives = 187/670 (27%), Gaps = 208/670 (31%)
Query: 374 HTVDRK-GEKLRTVNFKNCDTVTIEESQFSTNREFQHQAKTSIEDFYGDGQVVSSEIVMA 432
H +D + GE ++ D +++ E F N + + ++D ++S E
Sbjct: 5 HHMDFETGE----HQYQYKDILSVFEDAFVDNFDCKD-----VQDM--PKSILSKE---- 49
Query: 433 SESGCPIEMHEI-----EIEKCDEMYDKDCEGGKYIPFHRAGYDRSTGTS--PN-----S 480
E+ I + ++ + + + N S
Sbjct: 50 -------EIDHIIMSKDAVSGTLRLFWTLLSKQEEM------VQKFVEEVLRINYKFLMS 96
Query: 481 PRQQINRVSSWIDGSFIYSTSEAWLNAMRSFTNGSLATDASGKMPVKNTMRVPLFNNPVP 540
P + R S + +I + N + F K V R+ + +
Sbjct: 97 PIKTEQRQPSMMTRMYIEQRDRLY-NDNQVFA----------KYNVS---RLQPYLK-LR 141
Query: 541 HSLRTLSPER---LY---------LLGDA-RSNQNPALLAFSILFFRWHNV--------- 578
+L L P + + + D S + + F I F W N+
Sbjct: 142 QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI--F-WLNLKNCNSPETV 198
Query: 579 ------IAAQIEDKHPELSD---------EEIFQKTRRLVVAS--------LQNVIAYEY 615
+ QI+ SD I + RRL+ + L NV +
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKA 258
Query: 616 IPAFLGR----------SLSPYRGYKMDVHPGISHVFQT----------AAFRFGHSL-- 653
AF ++ + H + H T +
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY-LDCRPQD 317
Query: 654 IPPGIYRRDEKCNFKPTVKG-------DPAPPYRGYKMDVHPGISHVFQTAAFRFGHSL- 705
+P E P D + +K ++ + ++ SL
Sbjct: 318 LPR------EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIES-------SLN 364
Query: 706 -IPPGIYRRD-EKCN-FKPTVKGDPAIRLCSNWWDSTNVDPAI--------RLCSNWWDS 754
+ P YR+ ++ + F P+ P I L W+D D + L
Sbjct: 365 VLEPAEYRKMFDRLSVFPPSAH-IPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423
Query: 755 TNVMTYSTLEEILMGMASQLSEKEDAVLCSDIRDKLFGPNEFSRRDLGALNIMRGRDNGI 814
T S + I + + +L + L I D P F DL + D
Sbjct: 424 ---STIS-IPSIYLELKVKLE--NEYALHRSIVDHYNIPKTFDSDDLIPPYL----DQYF 473
Query: 815 ADYNTVRSNYNLKKLK---------------SW--NDLEAVNPALFKEAHGKEILKRLKR 857
+ ++LK ++ + + + A L++LK
Sbjct: 474 YSH----IGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKF 529
Query: 858 SYGNSL-DNIDLY------IGGMLESHEGPGPLFTNIILEQFTRLRDADRFWFENTENGM 910
Y + DN Y I L E N+I ++T L R + +
Sbjct: 530 -YKPYICDNDPKYERLVNAILDFLPKIE------ENLICSKYTDLL---RIALMAEDEAI 579
Query: 911 FTAAEVEAIR 920
F A + R
Sbjct: 580 FEEAHKQVQR 589
Score = 50.2 bits (119), Expect = 8e-06
Identities = 97/675 (14%), Positives = 180/675 (26%), Gaps = 234/675 (34%)
Query: 17 KKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMF 76
K + F +A+ F K + D + LS+ E + K +F
Sbjct: 19 KDILSVFEDAFVDNFDCKDVQ-----DMPKSI-----LSKEEIDHIIMSKDAVSGTLRLF 68
Query: 77 NIVDKDGDGRISFQEFLDTVV------LFSRGHTEDK----LRIIF----DMCDNDRNGV 122
+ + + Q+F++ V+ L S TE + + ++ D ND N V
Sbjct: 69 WTLLSKQEEMV--QKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND-NQV 125
Query: 123 IDKG-----ELAEMLRS-LVEMARTSFPS----GGAA-TTVVKIVLRGYYSYGNSLDNID 171
K + LR L+E+ G+ T V V Y I
Sbjct: 126 FAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKI- 184
Query: 172 LYIG-GMLESHEGPGPLFTNIILEQFTRL-RDADRFWFENTENGMFTAAEVEAIR----- 224
++ S E +LE +L D W +++ + +I+
Sbjct: 185 FWLNLKNCNSPET--------VLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 225 -------KITL------WDI-IVNATDIGADAI----QKNVFFWNATDPCPQPAQLNASM 266
+ L + NA ++ + K V TD + S+
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV-----TDFLSAATTTHISL 291
Query: 267 MMPCSYLKGFDYFEPVSLVFQGSELAYIYACLFLMVVPFICGAAGYGVIKLQDRKRRALK 326
E S L L + + QD R L
Sbjct: 292 DHH---SMTLTPDEVKS--------------LLLKYLD----------CRPQDLPREVLT 324
Query: 327 -------MKQEELKNGPSKANLAVGTVDKMAVREWLHANHKRFVKIRLGPETCLHTVDRK 379
+ E +++G + + W H N + I E+ L
Sbjct: 325 TNPRRLSIIAESIRDGLATWD------------NWKHVNCDKLTTII---ESSL------ 363
Query: 380 GEKLRTVNFKNC--------DTVTIEESQFSTNREFQHQAKTSIEDFYGDGQVVSSEIVM 431
L ++ + I S + D +V+
Sbjct: 364 -NVLEPAEYRKMFDRLSVFPPSAHIPTILLSL--------------IWFDVIKSDVMVVV 408
Query: 432 ASESGCPIEMHEIEIEKCDEMYDKDCEGGKY-IPFHRAGYDRSTGTSPNSP---RQQINR 487
++H + + +K + IP + Y N R ++
Sbjct: 409 N-------KLH----KYS--LVEKQPKESTISIP---SIYLELKVKLENEYALHRSIVDH 452
Query: 488 VSSWIDGSFIYSTSEAWLNAMRSFTNGSLATDASGKMPVKNTMRVPLFN---NPVPHSLR 544
Y N ++F + L L + + H L+
Sbjct: 453 ----------Y-------NIPKTFDSDDLIPP-------------YLDQYFYSHIGHHLK 482
Query: 545 TLSPERLYLLGDARSNQNPALLAFSILF--FRWHNVIAAQIEDKHPELSDEEIFQKTRRL 602
+ L F ++F FR+ +E K + +
Sbjct: 483 NIEHPERMTL-------------FRMVFLDFRF-------LEQK---IRHDSTAWNASGS 519
Query: 603 VVASLQNVIAYE-YI 616
++ +LQ + Y+ YI
Sbjct: 520 ILNTLQQLKFYKPYI 534
Score = 40.2 bits (93), Expect = 0.009
Identities = 91/683 (13%), Positives = 189/683 (27%), Gaps = 224/683 (32%)
Query: 755 TNVMTYSTLEEILMGMASQLSEKEDAVLCSDIRDKLFG-------------PNEFSRRDL 801
T Y ++IL + D C D++D + S
Sbjct: 11 TGEHQYQY-KDILSVFEDAFVDNFD---CKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR 66
Query: 802 GALNIMRGRDNGIADY--NTVRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSY 859
++ ++ + + +R NY + + + E ++ R+
Sbjct: 67 LFWTLLSKQEEMVQKFVEEVLRINYK------F-----LMSPIKTEQRQPSMMTRMYIEQ 115
Query: 860 GNSLDNIDLYIGGMLESHEGPGPLFT--NI-ILEQFTRLRDA---DRFWFENTEN----G 909
+ L N +F N+ L+ + +LR A R +N G
Sbjct: 116 RDRLYND--------------NQVFAKYNVSRLQPYLKLRQALLELR----PAKNVLIDG 157
Query: 910 MFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVF----FW----NATDPCPQPAQLNA- 960
+ + K + A D+ + FW N P L
Sbjct: 158 VLGSG------KTWV------ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 961 SMMMPCSYLKGFDYFEGSELAYIYACLFLMVVPFICGAAGYGVIKLQDRKRRALKMKQ-- 1018
+ ++ D+ +L + +Q RR LK K
Sbjct: 206 LYQIDPNWTSRSDHSSNIKL---------------------RIHSIQAELRRLLKSKPYE 244
Query: 1019 ------------EELK--NGPSKANLAVGTVDKMAVREWLHANHKRFVKIRLGPETCLHT 1064
+ N K + + T K V ++L A I L + T
Sbjct: 245 NCLLVLLNVQNAKAWNAFNLSCK--ILLTTRFK-QVTDFLSAATTT--HISLDHHSMTLT 299
Query: 1065 VDRKGEKLRTVNFKNCDTVTIEESQPERGKKKHPMVL------IRVHRDHDLVLEFDSLA 1118
+ + L ++ P +P L IR +
Sbjct: 300 -PDEVKSL----LLKYLDCRPQDL-PREVLTTNPRRLSIIAESIRDGLAT---WDNWKHV 350
Query: 1119 ARKKFMNKMEGFLNA-----MKKH---LII----VQSPR---------------ELMLAK 1151
K +E LN +K L + P +++ K
Sbjct: 351 NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNK 410
Query: 1152 AETR---ERRQKKLEHFFREAYALTFGLKPGEKRRRDDETG---EVVMRTSLSRAE---- 1201
E++ K+ ++ L K + ++E +V ++ +
Sbjct: 411 LHKYSLVEKQPKESTISI---PSIYLEL----KVKLENEYALHRSIVDHYNIPKTFDSDD 463
Query: 1202 ---------FASALG--MKS------DAVFVRMMFNI------VDKDGDGRISFQEFLDT 1238
F S +G +K+ +F + + + D + L+T
Sbjct: 464 LIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNT 523
Query: 1239 V--VLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART--TSLTDSQVTE 1294
+ + F + + +CDND + ++ ++++ +L S+ T+
Sbjct: 524 LQQLKFYKPY----------ICDND-------PKYERLVNAILDFLPKIEENLICSKYTD 566
Query: 1295 LIDGMFQSPRELMLAKAETRERR 1317
L+ + E + +A + +R
Sbjct: 567 LLRIALMAEDEAIFEEAHKQVQR 589
Score = 33.7 bits (76), Expect = 0.76
Identities = 48/444 (10%), Positives = 118/444 (26%), Gaps = 155/444 (34%)
Query: 4 EQLDRRQLRERRQKK-------------LEHF-F--------REAYALTFGLKPGEKRRR 41
+ RR L+ + + F R +T L
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFK-QVTDFLSAATTTHI 289
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSD--------------AVFVRMMFNIVDKDGDGRI 87
+ + + ++ L + ++ + +DG
Sbjct: 290 SLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI-----RDGLATW 344
Query: 88 SFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGG 147
+ ++ DKL I + N V++ E +M L FP
Sbjct: 345 DNWKHVNC----------DKLTTIIESSLN----VLEPAEYRKMFDRLS-----VFPPS- 384
Query: 148 AATTVVKI---VLRGYYSYGNSLDNIDLYIGGMLESHEGPGPLFTNIILEQFTRLRDADR 204
I +L + D + ++ + + ++
Sbjct: 385 -----AHIPTILLSLIWFDVIKSDVMV--------------------VVNKLHKYSLVEK 419
Query: 205 FWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDPCPQPAQLNA 264
E+T I++ I + + K L+
Sbjct: 420 QPKEST---------------ISIPSIYL-------ELKVK----------LENEYALHR 447
Query: 265 SMMMPCSYLKGFDYFEPVSLVFQGSELAYIYACLFLMVVPFICGAAGYGVIKLQDRKRRA 324
S++ + K FD + + Y Y+ I G+ + ++ +R
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQ----YFYS--------HI----GHHLKNIEHPERMT 491
Query: 325 LKMK--------QEELKNGPSKANLAVGTVDKMAV----REWLHANHKRFVKIRLGPETC 372
L ++++++ + N + ++ + + ++ N ++ ++
Sbjct: 492 LFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV---NAI 548
Query: 373 LHTVDRKGEKLRTVNFKNCDTVTI 396
L + + E L + K D + I
Sbjct: 549 LDFLPKIEENL--ICSKYTDLLRI 570
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory
light chain LC-2, mantle muscle; rigor-like, squid,
contractIle protein; 2.60A {Todarodes pacificus} PDB:
2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Length = 159
Score = 66.8 bits (164), Expect = 1e-12
Identities = 25/133 (18%), Positives = 43/133 (32%), Gaps = 21/133 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD---TVVLFSRGHT 1406
++R LGM V K G+ +E L + G
Sbjct: 35 DLLR----------CLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTA 83
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
D+ F D + G+I E+ +L+ L E +T+ Q ++ D D
Sbjct: 84 ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE-----RITEDQCNDIFTFC--DIREDI 136
Query: 1467 KDFLTYQDFKLMM 1479
+ Y+D +
Sbjct: 137 DGNIKYEDLMKKV 149
Score = 59.5 bits (145), Expect = 4e-10
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 19/111 (17%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD---TVVLFSRGHT 1247
++R LGM V K G+ +E L + G
Sbjct: 35 DLLR----------CLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTA 83
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
D+ F D + G+I E+ +L+ L E +T+ Q ++
Sbjct: 84 ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE-----RITEDQCNDIFTF 129
Score = 52.6 bits (127), Expect = 9e-08
Identities = 18/91 (19%), Positives = 29/91 (31%), Gaps = 14/91 (15%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD---TVVLFSRGHT 104
++R LGM V K G+ +E L + G
Sbjct: 35 DLLR----------CLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKDTGTA 83
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
D+ F D + G+I E+ +L+ L
Sbjct: 84 ADEFMEAFKTFDREGQGLISSAEIRNVLKML 114
Score = 43.7 bits (104), Expect = 1e-04
Identities = 30/162 (18%), Positives = 57/162 (35%), Gaps = 39/162 (24%)
Query: 1249 DKLRIIFDMCDN--DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID------GM- 1299
+++R +FD+ D R+G +D ++ ++LR L T++QV +
Sbjct: 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMN-----PTEAQVHQHGGTKKMGEKAY 63
Query: 1300 -FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSR 1358
+ + + E F EA+ F + G + S
Sbjct: 64 KLEEILPIYEEMSSKDTGTAAD-E--FMEAFKT-FD---------REGQGLI------SS 104
Query: 1359 AEF---ASALGMKSDAVFVRMMFNIVD--KDGDGRISFQEFL 1395
AE LG + +F D +D DG I +++ +
Sbjct: 105 AEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLM 146
Score = 34.9 bits (81), Expect = 0.11
Identities = 13/75 (17%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 1408 DKLRIIFDMCDN--DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+++R +FD+ D R+G +D ++ ++LR L T++QV +
Sbjct: 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMN-----PTEAQVHQHGG---TKK--M 58
Query: 1466 SKDFLTYQDFKLMMR 1480
+ ++ +
Sbjct: 59 GEKAYKLEEILPIYE 73
Score = 32.2 bits (74), Expect = 0.91
Identities = 10/67 (14%), Positives = 20/67 (29%), Gaps = 7/67 (10%)
Query: 76 FNIVD--KDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEM 131
F++ D DG + + D +L G TE ++ E+ +
Sbjct: 15 FDLFDFWDGRDGDVDAAKVGD--LLRCLGMNPTEAQVHQHGGT-KKMGEKAYKLEEILPI 71
Query: 132 LRSLVEM 138
+
Sbjct: 72 YEEMSSK 78
Score = 31.0 bits (71), Expect = 1.8
Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 106 DKLRIIFDMCDN--DRNGVIDKGELAEMLRSL 135
+++R +FD+ D R+G +D ++ ++LR L
Sbjct: 9 EEVREVFDLFDFWDGRDGDVDAAKVGDLLRCL 40
Score = 30.6 bits (70), Expect = 2.6
Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 72 VRMMFNIVD--KDGDGRISFQEFL 93
+F D +D DG I +++ +
Sbjct: 123 CNDIFTFCDIREDIDGNIKYEDLM 146
Score = 30.6 bits (70), Expect = 2.6
Identities = 6/24 (25%), Positives = 12/24 (50%), Gaps = 2/24 (8%)
Query: 1215 VRMMFNIVD--KDGDGRISFQEFL 1236
+F D +D DG I +++ +
Sbjct: 123 CNDIFTFCDIREDIDGNIKYEDLM 146
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A
{Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A
1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D*
2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A
1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Length = 148
Score = 66.0 bits (162), Expect = 2e-12
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1408
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 34 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEE 83
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
+L F + D D NG+I EL ++ +L E LTD +V E+I +A +D
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGE-----KLTDDEVDEMIR----EADIDGDG 134
Query: 1469 FLTYQDFKLMM 1479
+ Y++F MM
Sbjct: 135 HINYEEFVRMM 145
Score = 59.0 bits (144), Expect = 4e-10
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1249
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 34 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEE 83
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
+L F + D D NG+I EL ++ +L E LTD +V E+I
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNLGE-----KLTDDEVDEMIRE 127
Score = 54.4 bits (132), Expect = 2e-08
Identities = 48/182 (26%), Positives = 68/182 (37%), Gaps = 54/182 (29%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + DKDGDG I+ +E V+ S G TE +L+ + + D D NG ID E
Sbjct: 13 KEAFALFDKDGDGTITTKEL--GTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
+ MAR DS+ EL+ A F+ F
Sbjct: 71 L------MARKMKEQDSE------------EELIEA---------------FKV-----F 92
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQE 1393
D G ++ L + LG K V M D DGDG I+++E
Sbjct: 93 D---------RDGNG-LISAAELRHV--MTNLGEKLTDDEVDEMIREADIDGDGHINYEE 140
Query: 1394 FL 1395
F+
Sbjct: 141 FV 142
Score = 52.9 bits (128), Expect = 6e-08
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
VMR +LG ++ M N VD DG+G I F EFL + + +E+
Sbjct: 34 TVMR----------SLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEE 83
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+L F + D D NG+I EL ++ +L
Sbjct: 84 ELIEAFKVFDRDGNGLISAAELRHVMTNL 112
Score = 40.9 bits (97), Expect = 8e-04
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 12/77 (15%)
Query: 1406 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
TE++ + F + D D +G I EL ++RSL + T++++ ++I +
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI----NEV 55
Query: 1463 GLDSKDFLTYQDFKLMM 1479
D + + +F +M
Sbjct: 56 DADGNGTIDFPEFLSLM 72
Score = 37.5 bits (88), Expect = 0.012
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 71 FVRMM----------------FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIF 112
F+ +M F + D+DG+G IS E V+ + G T+D++ +
Sbjct: 68 FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH--VMTNLGEKLTDDEVDEMI 125
Query: 113 DMCDNDRNGVIDKGELAEMLRS 134
D D +G I+ E M+ S
Sbjct: 126 READIDGDGHINYEEFVRMMVS 147
Score = 37.5 bits (88), Expect = 0.012
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 1214 FVRMM----------------FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIF 1255
F+ +M F + D+DG+G IS E V+ + G T+D++ +
Sbjct: 68 FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH--VMTNLGEKLTDDEVDEMI 125
Query: 1256 DMCDNDRNGVIDKGELAEMLRS 1277
D D +G I+ E M+ S
Sbjct: 126 READIDGDGHINYEEFVRMMVS 147
Score = 37.5 bits (88), Expect = 0.012
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 1373 FVRMM----------------FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIF 1414
F+ +M F + D+DG+G IS E V+ + G T+D++ +
Sbjct: 68 FLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRH--VMTNLGEKLTDDEVDEMI 125
Query: 1415 DMCDNDRNGVIDKGELAEMLRS 1436
D D +G I+ E M+ S
Sbjct: 126 READIDGDGHINYEEFVRMMVS 147
Score = 37.1 bits (87), Expect = 0.018
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 60 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ LG K V M D DGDG I+++EF+
Sbjct: 109 MTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Score = 37.1 bits (87), Expect = 0.018
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 1203 ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ LG K V M D DGDG I+++EF+
Sbjct: 109 MTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 142
Score = 34.0 bits (79), Expect = 0.19
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 104 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
TE++ + F + D D +G I EL ++RSL
Sbjct: 5 TEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL 39
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase,
transferase, calcium-bindin binding, EF hand, bumped
kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii}
PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A*
3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A*
3ku2_A* 3hx4_A*
Length = 484
Score = 71.3 bits (175), Expect = 2e-12
Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 11/136 (8%)
Query: 1345 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1404
E E + + AS L + V + + VD D +G I + EF+ +
Sbjct: 355 AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
Query: 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
+ ++L F M D+D +G I ELA + +E + +
Sbjct: 415 LSRERLERAFRMFDSDNSGKISSTELATIFGV-----------SDVDSETWKSVLSEVDK 463
Query: 1465 DSKDFLTYQDFKLMMR 1480
++ + + +F+ M+
Sbjct: 464 NNDGEVDFDEFQQMLL 479
Score = 57.8 bits (140), Expect = 2e-08
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 43 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 102
E E + + AS L + V + + VD D +G I + EF+ +
Sbjct: 355 AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
Query: 103 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
+ ++L F M D+D +G I ELA +
Sbjct: 415 LSRERLERAFRMFDSDNSGKISSTELATIFG 445
Score = 57.8 bits (140), Expect = 2e-08
Identities = 23/91 (25%), Positives = 38/91 (41%)
Query: 1186 DETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRG 1245
E E + + AS L + V + + VD D +G I + EF+ +
Sbjct: 355 AELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTL 414
Query: 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
+ ++L F M D+D +G I ELA +
Sbjct: 415 LSRERLERAFRMFDSDNSGKISSTELATIFG 445
Score = 52.8 bits (127), Expect = 8e-07
Identities = 33/159 (20%), Positives = 61/159 (38%), Gaps = 32/159 (20%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART------TSLTDSQVTELIDGMFQS 1302
+L IF D + +G +D+ EL E + L+ M S + +V +++D +
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 394
Query: 1303 P------RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSL 1356
E + +R+ A+ + F D +G +
Sbjct: 395 KNGYIEYSEFVTV---AMDRKTLLSRERLERAFRM-FDS---------DNSG------KI 435
Query: 1357 SRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 1394
S E A+ G+ D+ + + + VDK+ DG + F EF
Sbjct: 436 SSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 47.0 bits (112), Expect = 6e-05
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ F + D D G+IS E + + + + D + +G +D E +
Sbjct: 419 RLERAFRMFDSDNSGKISSTELAT--IFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Query: 131 MLRSL 135
ML L
Sbjct: 477 MLLKL 481
Score = 47.0 bits (112), Expect = 6e-05
Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + D D G+IS E + + + + D + +G +D E +
Sbjct: 419 RLERAFRMFDSDNSGKISSTELAT--IFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQ 476
Query: 1274 MLRSL 1278
ML L
Sbjct: 477 MLLKL 481
Score = 44.3 bits (105), Expect = 3e-04
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 73 RMMFNIVDKDGDGRISFQEF-----------LDTVVLFSRGHTEDKLRIIFDMCDNDRNG 121
+F+ +DK+GDG++ E + E ++ + D D D+NG
Sbjct: 338 TAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNG 397
Query: 122 VIDKGE 127
I+ E
Sbjct: 398 YIEYSE 403
Score = 44.3 bits (105), Expect = 3e-04
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 11/66 (16%)
Query: 1216 RMMFNIVDKDGDGRISFQEF-----------LDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1264
+F+ +DK+GDG++ E + E ++ + D D D+NG
Sbjct: 338 TAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNG 397
Query: 1265 VIDKGE 1270
I+ E
Sbjct: 398 YIEYSE 403
Score = 43.1 bits (102), Expect = 8e-04
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 54 LSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 92
+S E A+ G+ D+ + + + VDK+ DG + F EF
Sbjct: 435 ISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 43.1 bits (102), Expect = 8e-04
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 1197 LSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 1235
+S E A+ G+ D+ + + + VDK+ DG + F EF
Sbjct: 435 ISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 35.4 bits (82), Expect = 0.21
Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART--TSLTDSQVTELIDGMFQDAGLD 1465
+L IF D + +G +D+ EL E + L+ M + L S V +D + D
Sbjct: 335 KELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFD 394
Query: 1466 SKDFLTYQDF 1475
++ Y +F
Sbjct: 395 KNGYIEYSEF 404
>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein;
HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB:
1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A
Length = 109
Score = 64.2 bits (157), Expect = 2e-12
Identities = 18/97 (18%), Positives = 40/97 (41%), Gaps = 8/97 (8%)
Query: 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443
++F V L + + D ++ +F + D D++G I++ EL +L+ AR
Sbjct: 19 TAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD 76
Query: 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
L+ + L+ D + ++F ++
Sbjct: 77 --LSAKETKTLM----AAGDKDGDGKIGVEEFSTLVA 107
Score = 60.4 bits (147), Expect = 6e-11
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 1225 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284
++F V L + + D ++ +F + D D++G I++ EL +L+ AR
Sbjct: 19 TAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARD 76
Query: 1285 TSLTDSQVTELID 1297
L+ + L+
Sbjct: 77 --LSAKETKTLMA 87
Score = 52.7 bits (127), Expect = 3e-08
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 82 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 140
++F V L + + D ++ +F + D D++G I++ EL +L+ AR
Sbjct: 19 TAADSFDHKKFFQMVGL--KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR 75
Score = 51.9 bits (125), Expect = 5e-08
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 53 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 108
S +F +G+K + V+ +F+I+DKD G I E L +R + +
Sbjct: 23 SFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRS 134
+ + D D +G I E + ++
Sbjct: 83 KTLMAAGDKDGDGKIGVEEFSTLVAE 108
Score = 51.9 bits (125), Expect = 5e-08
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 1196 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 1251
S +F +G+K + V+ +F+I+DKD G I E L +R + +
Sbjct: 23 SFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ + D D +G I E + ++
Sbjct: 83 KTLMAAGDKDGDGKIGVEEFSTLVAE 108
Score = 51.9 bits (125), Expect = 5e-08
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 1355 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 1410
S +F +G+K + V+ +F+I+DKD G I E L +R + +
Sbjct: 23 SFDHKKFFQMVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ + D D +G I E + ++
Sbjct: 83 KTLMAAGDKDGDGKIGVEEFSTLVAE 108
>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR
{Schizosaccharomyces pombe} SCOP: a.39.1.5
Length = 140
Score = 64.4 bits (158), Expect = 5e-12
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 1381 VDKDGDGRISFQEFLD---TVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
++ + ++FL F ++ F + D D G+I GEL +L SL
Sbjct: 46 IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL 105
Query: 1438 VEMARTTSLTDSQVTELIDGMFQDAGLDSKD-FLTYQDFKLMM 1479
E L++ ++ EL+ G+ KD + Y DF M+
Sbjct: 106 GE-----KLSNEEMDELLKGV------PVKDGMVNYHDFVQMI 137
Score = 59.4 bits (145), Expect = 2e-10
Identities = 19/80 (23%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 1222 VDKDGDGRISFQEFLD---TVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
++ + ++FL F ++ F + D D G+I GEL +L SL
Sbjct: 46 IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL 105
Query: 1279 VEMARTTSLTDSQVTELIDG 1298
E L++ ++ EL+ G
Sbjct: 106 GE-----KLSNEEMDELLKG 120
Score = 52.9 bits (128), Expect = 5e-08
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 79 VDKDGDGRISFQEFLD---TVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++ + ++FL F ++ F + D D G+I GEL +L SL
Sbjct: 46 IESTLPAEVDMEQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSL 105
Score = 45.2 bits (108), Expect = 3e-05
Identities = 25/157 (15%), Positives = 56/157 (35%), Gaps = 35/157 (22%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---DGM--FQS 1302
+ + F + D G I K + ++LR+ + T +++TE+ +
Sbjct: 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQN-----PTLAEITEIESTLPAEVDMEQ 58
Query: 1303 PRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF- 1361
+++ + E F + + + F D TG + E
Sbjct: 59 FLQVLNRPNGFDMPGDPE-E--FVKGFQV-F---------DKDATGMI------GVGELR 99
Query: 1362 --ASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFL 1395
++LG K S+ + + V DG +++ +F+
Sbjct: 100 YVLTSLGEKLSNEE-MDELLKGVPVK-DGMVNYHDFV 134
Score = 37.5 bits (88), Expect = 0.010
Identities = 11/73 (15%), Positives = 27/73 (36%), Gaps = 13/73 (17%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
+ + F + D G I K + ++LR+ + T +++TE+
Sbjct: 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQN-----PTLAEITEIES--------TL 50
Query: 1467 KDFLTYQDFKLMM 1479
+ + F ++
Sbjct: 51 PAEVDMEQFLQVL 63
Score = 35.9 bits (84), Expect = 0.034
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ + F + D G I K + ++LR+
Sbjct: 4 DSPYKQAFSLFDRHGTGRIPKTSIGDLLRAC 34
Score = 33.2 bits (77), Expect = 0.26
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F + DKD G I E VL S G + +++ + +G+++ + +M+
Sbjct: 82 FQVFDKDATGMIGVGELRY--VLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138
Query: 134 S 134
+
Sbjct: 139 A 139
Score = 33.2 bits (77), Expect = 0.26
Identities = 13/61 (21%), Positives = 27/61 (44%), Gaps = 5/61 (8%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F + DKD G I E VL S G + +++ + +G+++ + +M+
Sbjct: 82 FQVFDKDATGMIGVGELRY--VLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL 138
Query: 1277 S 1277
+
Sbjct: 139 A 139
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A
{Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A
Length = 147
Score = 64.4 bits (158), Expect = 6e-12
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 23/133 (17%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1408
VMR +LG+ V + N +D DG+ I F EFL + + + +E
Sbjct: 35 TVMR----------SLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQ 84
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
+L F + D + +G+I EL +L S+ E LTD++V E++ +
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDEMLREV------SDGS 133
Query: 1469 -FLTYQDFKLMMR 1480
+ + F ++
Sbjct: 134 GEINIKQFAALLS 146
Score = 59.8 bits (146), Expect = 2e-10
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1249
VMR +LG+ V + N +D DG+ I F EFL + + + +E
Sbjct: 35 TVMR----------SLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQ 84
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
+L F + D + +G+I EL +L S+ E LTD++V E++
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSIGE-----KLTDAEVDEMLRE 128
Score = 53.2 bits (129), Expect = 4e-08
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
VMR +LG+ V + N +D DG+ I F EFL + + + +E
Sbjct: 35 TVMR----------SLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQ 84
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+L F + D + +G+I EL +L S+
Sbjct: 85 ELLEAFKVFDKNGDGLISAAELKHVLTSI 113
Score = 51.7 bits (125), Expect = 2e-07
Identities = 38/182 (20%), Positives = 62/182 (34%), Gaps = 55/182 (30%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + DKD G IS E V+ S G +E ++ + + D D N I+ E
Sbjct: 14 KEAFALFDKDNSGSISASEL--ATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
+ M+R DS+ +EL+ A F+ F
Sbjct: 72 L------MSRQLKCNDSE------------QELLEA---------------FKV-----F 93
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQE 1393
+ G ++ L +++G K V M V DG G I+ ++
Sbjct: 94 D---------KNGDG-LISAAELKHV--LTSIGEKLTDAEVDEMLREVS-DGSGEINIKQ 140
Query: 1394 FL 1395
F
Sbjct: 141 FA 142
Score = 42.1 bits (100), Expect = 3e-04
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
+ F + DKD G IS E V+ S G +E ++ + + D D N I+ E LA
Sbjct: 14 KEAFALFDKDNSGSISASEL--ATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEFSEFLA 71
Query: 130 EMLRSLVEM 138
M R L
Sbjct: 72 LMSRQLKCN 80
Score = 40.1 bits (95), Expect = 0.001
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F + D D +G I ELA ++RSL ++++V +L+ + +D
Sbjct: 13 FKEAFALFDKDNSGSISASELATVMRSLGLS-----PSEAEVADLM----NEIDVDGNHA 63
Query: 1470 LTYQDFKLMM 1479
+ + +F +M
Sbjct: 64 IEFSEFLALM 73
Score = 33.6 bits (78), Expect = 0.23
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ G ++ L +++G K V M V DG G I+ ++F
Sbjct: 95 KNGDG-LISAAELKHV--LTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFA 142
Score = 33.6 bits (78), Expect = 0.23
Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ G ++ L +++G K V M V DG G I+ ++F
Sbjct: 95 KNGDG-LISAAELKHV--LTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFA 142
Score = 33.2 bits (77), Expect = 0.30
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D D +G I ELA ++RSL
Sbjct: 13 FKEAFALFDKDNSGSISASELATVMRSL 40
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural
genomics, structural genomic consortium, SGC,
transferase; HET: ANP; 2.10A {Plasmodium berghei}
Length = 504
Score = 69.3 bits (170), Expect = 7e-12
Identities = 28/137 (20%), Positives = 53/137 (38%), Gaps = 22/137 (16%)
Query: 1355 SLSRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 1403
L + E +K+ V + VD D +G I + EF+ +
Sbjct: 371 QLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQI 430
Query: 1404 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG 1463
+E++LR F++ D D++G I K ELA + S + + + +A
Sbjct: 431 LFSEERLRRAFNLFDTDKSGKITKEELANLFGL-----------TSISEKTWNDVLGEAD 479
Query: 1464 LDSKDFLTYQDFKLMMR 1480
+ + + + +F MM
Sbjct: 480 QNKDNMIDFDEFVSMMH 496
Score = 56.2 bits (136), Expect = 8e-08
Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 18/113 (15%)
Query: 1196 SLSRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 1244
L + E +K+ V + VD D +G I + EF+ +
Sbjct: 371 QLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQI 430
Query: 1245 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+E++LR F++ D D++G I K ELA + TS+++ +++
Sbjct: 431 LFSEERLRRAFNLFDTDKSGKITKEELANLFGL-------TSISEKTWNDVLG 476
Score = 55.9 bits (135), Expect = 1e-07
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 53 SLSRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 101
L + E +K+ V + VD D +G I + EF+ +
Sbjct: 371 QLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQI 430
Query: 102 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
+E++LR F++ D D++G I K ELA +
Sbjct: 431 LFSEERLRRAFNLFDTDKSGKITKEELANLFG 462
Score = 50.5 bits (121), Expect = 4e-06
Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 29/156 (18%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS---LTDSQVTELIDGMFQSP-- 1303
+L IF D + +G +DK EL E L + +V ++ +
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 414
Query: 1304 ----RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRA 1359
E + +++ E R A+ L F D++G +++
Sbjct: 415 YIEYSEFISV---CMDKQILFSEERLRRAFNL-FDT---------DKSG------KITKE 455
Query: 1360 EFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 1394
E A+ G+ S + D++ D I F EF
Sbjct: 456 ELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEF 491
Score = 47.0 bits (112), Expect = 5e-05
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 73 RMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
+F +DK+GDG++ +E ++ L + E+++ I D D+NG I+
Sbjct: 358 TDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIE 417
Query: 125 KGE 127
E
Sbjct: 418 YSE 420
Score = 47.0 bits (112), Expect = 5e-05
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLD--------TVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1267
+F +DK+GDG++ +E ++ L + E+++ I D D+NG I+
Sbjct: 358 TDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIE 417
Query: 1268 KGE 1270
E
Sbjct: 418 YSE 420
Score = 47.0 bits (112), Expect = 6e-05
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+R FN+ D D G+I+ +E + + +E + D +++ +ID E M
Sbjct: 437 LRRAFNLFDTDKSGKITKEELAN--LFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 132 LRSLVE 137
+ + +
Sbjct: 495 MHKICD 500
Score = 47.0 bits (112), Expect = 6e-05
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+R FN+ D D G+I+ +E + + +E + D +++ +ID E M
Sbjct: 437 LRRAFNLFDTDKSGKITKEELAN--LFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 1275 LRSLVE 1280
+ + +
Sbjct: 495 MHKICD 500
Score = 47.0 bits (112), Expect = 6e-05
Identities = 14/66 (21%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+R FN+ D D G+I+ +E + + +E + D +++ +ID E M
Sbjct: 437 LRRAFNLFDTDKSGKITKEELAN--LFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSM 494
Query: 1434 LRSLVE 1439
+ + +
Sbjct: 495 MHKICD 500
Score = 42.4 bits (100), Expect = 0.001
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 54 LSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 92
+++ E A+ G+ S + D++ D I F EF
Sbjct: 452 ITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEF 491
Score = 42.4 bits (100), Expect = 0.001
Identities = 10/40 (25%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Query: 1197 LSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEF 1235
+++ E A+ G+ S + D++ D I F EF
Sbjct: 452 ITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEF 491
Score = 37.8 bits (88), Expect = 0.044
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+L IF D + +G +DK EL E L + E +D + ++ D
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE-VDNILKEVDFDKN 413
Query: 1468 DFLTYQDF 1475
++ Y +F
Sbjct: 414 GYIEYSEF 421
Score = 30.4 bits (69), Expect = 7.2
Identities = 13/51 (25%), Positives = 18/51 (35%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIV 156
+L IF D + +G +DK EL E L V I+
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNIL 405
>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein,
regulation, complex, calcium, EF- hand, calmodulin,
ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis
thaliana}
Length = 135
Score = 63.5 bits (155), Expect = 9e-12
Identities = 15/109 (13%), Positives = 31/109 (28%), Gaps = 11/109 (10%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
+ M +++ L + + L F + + +I L
Sbjct: 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSE-LCKGFSLLADPERHLITAESLR 63
Query: 1432 EMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
L ++ E GM ++ LD L +F ++M
Sbjct: 64 RNSGIL----GIEGMSK----EDAQGMVREGDLDGDGALNQTEFCVLMV 104
Score = 55.0 bits (133), Expect = 7e-09
Identities = 7/85 (8%), Positives = 20/85 (23%), Gaps = 7/85 (8%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ M +++ L + + L F + + +I L
Sbjct: 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSE-LCKGFSLLADPERHLITAESLR 63
Query: 1273 EMLRSLVEMARTTSLTDSQVTELID 1297
L ++ ++
Sbjct: 64 RNSGIL----GIEGMSKEDAQGMVR 84
Score = 52.0 bits (125), Expect = 9e-08
Identities = 7/66 (10%), Positives = 16/66 (24%), Gaps = 3/66 (4%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 129
+ M +++ L + + L F + + +I L
Sbjct: 5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSE-LCKGFSLLADPERHLITAESLR 63
Query: 130 EMLRSL 135
L
Sbjct: 64 RNSGIL 69
Score = 38.9 bits (91), Expect = 0.003
Identities = 9/92 (9%), Positives = 28/92 (30%), Gaps = 11/92 (11%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGEL 1430
+ F+++ I+ + G +++ + + D D +G +++ E
Sbjct: 42 LCKGFSLLADPERHLITAESLRR--NSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEF 99
Query: 1431 AEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
+ M R + ++
Sbjct: 100 CVL------MVRLSPEMMEDAETWLEKALTQE 125
Score = 38.9 bits (91), Expect = 0.003
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 11/74 (14%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGEL 128
+ F+++ I+ + G +++ + + D D +G +++ E
Sbjct: 42 LCKGFSLLADPERHLITAESLRR--NSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEF 99
Query: 129 AEMLRSLVEMARTS 142
+ M R S
Sbjct: 100 CVL------MVRLS 107
Score = 36.2 bits (84), Expect = 0.027
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND 118
+ M D DGDG ++ EF +V S ED + +
Sbjct: 79 AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125
Score = 36.2 bits (84), Expect = 0.027
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDND 1261
+ M D DGDG ++ EF +V S ED + +
Sbjct: 79 AQGMVREGDLDGDGALNQTEFCVLMVRLSPEMMEDAETWLEKALTQE 125
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB:
2pas_A 3pat_A
Length = 110
Score = 62.6 bits (153), Expect = 1e-11
Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++ + V +G + ++F V L + + + ++ +F D D +G I++ EL +
Sbjct: 12 IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFV 67
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
L+S R LTD + A D + +F+ ++
Sbjct: 68 LKSFAADGRD--LTD----AETKAFLKAADKDGDGKIGIDEFETLVH 108
Score = 58.4 bits (142), Expect = 3e-10
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
++ + V +G + ++F V L + + + ++ +F D D +G I++ EL +
Sbjct: 12 IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFV 67
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
L+S R LTD++ +
Sbjct: 68 LKSFAADGRD--LTDAETKAFLK 88
Score = 51.8 bits (125), Expect = 6e-08
Identities = 15/70 (21%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
++ + V +G + ++F V L + + + ++ +F D D +G I++ EL +
Sbjct: 12 IKKALDAVK--AEGSFNHKKFFALVGL--KAMSANDVKKVFKAIDADASGFIEEEELKFV 67
Query: 132 LRSLVEMART 141
L+S R
Sbjct: 68 LKSFAADGRD 77
Score = 44.9 bits (107), Expect = 1e-05
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 58 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 113
+F + +G+K+ + V+ +F +D D G I +E L + R T+ + +
Sbjct: 29 KFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88
Query: 114 MCDNDRNGVIDKGELAEMLRS 134
D D +G I E ++
Sbjct: 89 AADKDGDGKIGIDEFETLVHE 109
Score = 44.9 bits (107), Expect = 1e-05
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 1201 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1256
+F + +G+K+ + V+ +F +D D G I +E L + R T+ + +
Sbjct: 29 KFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88
Query: 1257 MCDNDRNGVIDKGELAEMLRS 1277
D D +G I E ++
Sbjct: 89 AADKDGDGKIGIDEFETLVHE 109
Score = 44.9 bits (107), Expect = 1e-05
Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 1360 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1415
+F + +G+K+ + V+ +F +D D G I +E L + R T+ + +
Sbjct: 29 KFFALVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88
Query: 1416 MCDNDRNGVIDKGELAEMLRS 1436
D D +G I E ++
Sbjct: 89 AADKDGDGKIGIDEFETLVHE 109
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform;
phosphorylation, 2D crystalline arrays, myosin
regulation, M light chains, structural protein; 20.00A
{Gallus gallus}
Length = 143
Score = 63.7 bits (156), Expect = 1e-11
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 16/103 (15%)
Query: 1382 DKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
+ G I+F FL +F ED +R F D + +G I + L E+L ++
Sbjct: 49 MSEAPGPINFTMFLT---MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM 105
Query: 1438 VEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
+ TD +V E M+++A +D K Y +F +++
Sbjct: 106 GD-----RFTDEEVDE----MYREAPIDKKGNFNYVEFTRILK 139
Score = 54.4 bits (132), Expect = 2e-08
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 12/80 (15%)
Query: 1223 DKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
+ G I+F FL +F ED +R F D + +G I + L E+L ++
Sbjct: 49 MSEAPGPINFTMFLT---MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM 105
Query: 1279 VEMARTTSLTDSQVTELIDG 1298
+ TD +V E+
Sbjct: 106 GD-----RFTDEEVDEMYRE 120
Score = 50.6 bits (122), Expect = 3e-07
Identities = 30/156 (19%), Positives = 54/156 (34%), Gaps = 40/156 (25%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---DG-----MFQS 1302
+ F+M D +R+G IDK +L +ML S+ + TD + ++ G MF
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASMGKN-----PTDEYLEGMMSEAPGPINFTMFL- 62
Query: 1303 PRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF- 1361
+ + E R A+A F ++ +G +
Sbjct: 63 --TMF-----GEKLNGTDPEDVIRNAFAC-FD---------EEASG------FIHEDHLR 99
Query: 1362 --ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ +G + V M+ D G ++ EF
Sbjct: 100 ELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFT 135
Score = 48.3 bits (116), Expect = 2e-06
Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 7/62 (11%)
Query: 80 DKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ G I+F FL +F ED +R F D + +G I + L E+L ++
Sbjct: 49 MSEAPGPINFTMFLT---MFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTM 105
Query: 136 VE 137
+
Sbjct: 106 GD 107
Score = 38.6 bits (91), Expect = 0.004
Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F D++ G I + +L + G T++++ ++ D+ G + E +L+
Sbjct: 82 FACFDEEASGFIHEDHLRE--LLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139
Query: 134 S 134
Sbjct: 140 H 140
Score = 38.6 bits (91), Expect = 0.004
Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F D++ G I + +L + G T++++ ++ D+ G + E +L+
Sbjct: 82 FACFDEEASGFIHEDHLRE--LLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139
Query: 1277 S 1277
Sbjct: 140 H 140
Score = 38.6 bits (91), Expect = 0.004
Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
F D++ G I + +L + G T++++ ++ D+ G + E +L+
Sbjct: 82 FACFDEEASGFIHEDHLRE--LLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILK 139
Query: 1436 S 1436
Sbjct: 140 H 140
Score = 38.2 bits (90), Expect = 0.007
Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-DGMFQDAGLDSKD 1468
+ F+M D +R+G IDK +L +ML S+ + TD + ++ + ++
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASMGKN-----PTDEYLEGMMSEA---PGPINFTM 60
Query: 1469 FLTYQDFKLMMRDYKG 1484
FLT + G
Sbjct: 61 FLT-----MFGEKLNG 71
Score = 36.3 bits (85), Expect = 0.027
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F+M D +R+G IDK +L +ML S+
Sbjct: 9 FKEAFNMIDQNRDGFIDKEDLHDMLASM 36
Score = 35.5 bits (83), Expect = 0.055
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 72 VRMMFNIVDKDGDGRISFQEFL 93
V M+ D G ++ EF
Sbjct: 114 VDEMYREAPIDKKGNFNYVEFT 135
Score = 35.5 bits (83), Expect = 0.055
Identities = 6/22 (27%), Positives = 9/22 (40%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFL 1236
V M+ D G ++ EF
Sbjct: 114 VDEMYREAPIDKKGNFNYVEFT 135
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B*
1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B*
1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Length = 166
Score = 63.8 bits (156), Expect = 1e-11
Identities = 22/104 (21%), Positives = 38/104 (36%), Gaps = 16/104 (15%)
Query: 1381 VDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ K+ G I+F FL +F ED + F + D D G I K L E+L +
Sbjct: 67 MIKEASGPINFTVFLT---MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT 123
Query: 1437 LVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
T ++ M+ D + Y++ ++
Sbjct: 124 GGG-----RFTPEEIKN----MWAAFPPDVAGNVDYKNICYVIT 158
Score = 55.3 bits (134), Expect = 1e-08
Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 1222 VDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ K+ G I+F FL +F ED + F + D D G I K L E+L +
Sbjct: 67 MIKEASGPINFTVFLT---MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT 123
Query: 1278 LVEMARTTSLTDSQVTELIDG 1298
T ++ +
Sbjct: 124 GGG-----RFTPEEIKNMWAA 139
Score = 51.4 bits (124), Expect = 3e-07
Identities = 22/180 (12%), Positives = 48/180 (26%), Gaps = 53/180 (29%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ F ++D++ DG I + + + G K + M + +G I+ M
Sbjct: 28 KEAFTVIDQNADGIIDKDDLRE--TFAAMGRLNVKNEELDAM-IKEASGPINFTVFLTM- 83
Query: 1276 RSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGL 1335
D + +M A F+
Sbjct: 84 -----FGEKLKGADPE------------DVIMGA---------------FK-----VL-- 104
Query: 1336 KPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
D G + ++ L + G + ++ M+ D G + ++
Sbjct: 105 -------DPDGKG-SIKKSFLEEL--LTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNIC 154
Score = 49.1 bits (118), Expect = 1e-06
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 79 VDKDGDGRISFQEFLDTVVLFSR----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+ K+ G I+F FL +F ED + F + D D G I K L E+L +
Sbjct: 67 MIKEASGPINFTVFLT---MFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTT 123
Query: 135 LVE 137
Sbjct: 124 GGG 126
Score = 39.1 bits (92), Expect = 0.004
Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
F ++D DG G I + +L + G T ++++ ++ D G +D +
Sbjct: 98 MGAFKVLDPDGKGSIKKSFLEE--LLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICY 155
Query: 131 MLR 133
++
Sbjct: 156 VIT 158
Score = 39.1 bits (92), Expect = 0.004
Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
F ++D DG G I + +L + G T ++++ ++ D G +D +
Sbjct: 98 MGAFKVLDPDGKGSIKKSFLEE--LLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICY 155
Query: 1274 MLR 1276
++
Sbjct: 156 VIT 158
Score = 38.7 bits (91), Expect = 0.006
Identities = 10/52 (19%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
+ F ++D++ DG I + + + G K + M + +G I+
Sbjct: 28 KEAFTVIDQNADGIIDKDDLRE--TFAAMGRLNVKNEELDAM-IKEASGPIN 76
Score = 38.0 bits (89), Expect = 0.012
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 12/70 (17%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F + D + +G+IDK +L E ++ + E +D M ++A
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVK--------NEELDAMIKEA----SGP 74
Query: 1470 LTYQDFKLMM 1479
+ + F M
Sbjct: 75 INFTVFLTMF 84
Score = 37.2 bits (87), Expect = 0.017
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
D G + ++ L + G + ++ M+ D G + ++
Sbjct: 106 PDGKG-SIKKSFLEEL--LTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNIC 154
Score = 37.2 bits (87), Expect = 0.017
Identities = 7/52 (13%), Positives = 18/52 (34%), Gaps = 3/52 (5%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
D G + ++ L + G + ++ M+ D G + ++
Sbjct: 106 PDGKG-SIKKSFLEEL--LTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNIC 154
Score = 36.4 bits (85), Expect = 0.036
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D + +G+IDK +L E ++
Sbjct: 27 FKEAFTVIDQNADGIIDKDDLRETFAAM 54
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and
4 calmodulin...; transferase, calcium dependent protein
kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB:
3hzt_A* 3dxn_A 3l19_A*
Length = 494
Score = 68.2 bits (167), Expect = 1e-11
Identities = 26/139 (18%), Positives = 45/139 (32%), Gaps = 22/139 (15%)
Query: 1355 SLSRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 1403
L R E + V + D D +G I + EF+ +
Sbjct: 362 QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS 421
Query: 1404 GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG 1463
++DKL F D D NG I ELA + D ++ M
Sbjct: 422 LLSKDKLESAFQKFDQDGNGKISVDELASVFG-----------LDHLESKTWKEMISGID 470
Query: 1464 LDSKDFLTYQDFKLMMRDY 1482
++ + +++F M++
Sbjct: 471 SNNDGDVDFEEFCKMIQKL 489
Score = 54.7 bits (132), Expect = 3e-07
Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 53 SLSRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 101
L R E + V + D D +G I + EF+ +
Sbjct: 362 QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS 421
Query: 102 GHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
++DKL F D D NG I ELA +
Sbjct: 422 LLSKDKLESAFQKFDQDGNGKISVDELASVF 452
Score = 54.7 bits (132), Expect = 3e-07
Identities = 22/91 (24%), Positives = 31/91 (34%), Gaps = 11/91 (12%)
Query: 1196 SLSRAEFASAL-----------GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR 1244
L R E + V + D D +G I + EF+ +
Sbjct: 362 QLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKS 421
Query: 1245 GHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
++DKL F D D NG I ELA +
Sbjct: 422 LLSKDKLESAFQKFDQDGNGKISVDELASVF 452
Score = 50.9 bits (122), Expect = 3e-06
Identities = 29/159 (18%), Positives = 56/159 (35%), Gaps = 31/159 (19%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL---VEMARTTSLTDSQVTELIDGMFQSP-- 1303
+L IF D + +G +D+ EL + L +S+V ++
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNG 405
Query: 1304 ----RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSR 1358
E + +R+ + A+ ++ D D G +S
Sbjct: 406 YIDYSEFVTV---AMDRKSLLSKDKLESAF-----------QKFDQDGNG------KISV 445
Query: 1359 AEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEFLD 1396
E AS G+ ++ + M + +D + DG + F+EF
Sbjct: 446 DELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Score = 47.8 bits (114), Expect = 3e-05
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 73 RMMFNIVDKDGDGRISFQEFL--------DTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
+F +DK+GDG++ QE + + V +F E ++ I D DRNG ID
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYID 408
Query: 125 KGE 127
E
Sbjct: 409 YSE 411
Score = 47.8 bits (114), Expect = 3e-05
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 8/63 (12%)
Query: 1216 RMMFNIVDKDGDGRISFQEFL--------DTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1267
+F +DK+GDG++ QE + + V +F E ++ I D DRNG ID
Sbjct: 349 TDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYID 408
Query: 1268 KGE 1270
E
Sbjct: 409 YSE 411
Score = 45.5 bits (108), Expect = 2e-04
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ F D+DG+G+IS E V + + D++ +G +D E +
Sbjct: 427 KLESAFQKFDQDGNGKISVDELAS--VFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Query: 131 MLRSL 135
M++ L
Sbjct: 485 MIQKL 489
Score = 45.5 bits (108), Expect = 2e-04
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F D+DG+G+IS E V + + D++ +G +D E +
Sbjct: 427 KLESAFQKFDQDGNGKISVDELAS--VFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Query: 1274 MLRSL 1278
M++ L
Sbjct: 485 MIQKL 489
Score = 43.1 bits (102), Expect = 0.001
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 54 LSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEFLD 94
+S E AS G+ ++ + M + +D + DG + F+EF
Sbjct: 443 ISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Score = 43.1 bits (102), Expect = 0.001
Identities = 12/42 (28%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 1197 LSRAEFASALGMKS-DAVFVRMMFNIVDKDGDGRISFQEFLD 1237
+S E AS G+ ++ + M + +D + DG + F+EF
Sbjct: 443 ISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCK 484
Score = 35.4 bits (82), Expect = 0.22
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+L IF D + +G +D+ EL + L +E +D + A D
Sbjct: 346 KELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE-VDAILGAADFDRN 404
Query: 1468 DFLTYQDF 1475
++ Y +F
Sbjct: 405 GYIDYSEF 412
>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein;
HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB:
1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A
Length = 191
Score = 64.4 bits (157), Expect = 2e-11
Identities = 26/212 (12%), Positives = 58/212 (27%), Gaps = 62/212 (29%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDT---VVLFSRGH--TEDKLRIIFDMCDNDRNGV----- 1265
+ MFN +D + +G+IS E + +V+ + G + K G+
Sbjct: 19 KHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVE 78
Query: 1266 IDKGE-LAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHF 1324
D + + + + + + +
Sbjct: 79 TDWPAYIEGWKKLATDELEKYAKNEP------------------------TLIRIWGDAL 114
Query: 1325 FREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEFASA---LGMKSDAVFVRMMFNI 1380
F D D+ G + + E+ + G+ + F +
Sbjct: 115 FDIV---------------DKDQNGAI------TLDEWKAYTKAAGIIQSSEDCEETFRV 153
Query: 1381 VDKDGDGRISFQEFLDTVV--LFSRGHTEDKL 1410
D D G++ E + ++ +KL
Sbjct: 154 CDIDESGQLDVDEMTRQHLGFWYTMDPACEKL 185
Score = 62.9 bits (153), Expect = 6e-11
Identities = 17/135 (12%), Positives = 34/135 (25%), Gaps = 25/135 (18%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDG-----RISFQEFLDTVVLFSRGHTEDK--------- 1409
LG + G G + +++ + E
Sbjct: 49 NLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIR 108
Query: 1410 --LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+FD+ D D+NG I E ++ + E + F+ +D
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGI-----IQSS----EDCEETFRVCDIDES 159
Query: 1468 DFLTYQDFKLMMRDY 1482
L + +
Sbjct: 160 GQLDVDEMTRQHLGF 174
Score = 52.1 bits (125), Expect = 3e-07
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ +F+IVDKD +G I+ E+ + + F +CD D +G +D E+
Sbjct: 110 WGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
Query: 131 MLR 133
Sbjct: 170 QHL 172
Score = 52.1 bits (125), Expect = 3e-07
Identities = 16/63 (25%), Positives = 28/63 (44%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ +F+IVDKD +G I+ E+ + + F +CD D +G +D E+
Sbjct: 110 WGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTR 169
Query: 1274 MLR 1276
Sbjct: 170 QHL 172
Score = 51.3 bits (123), Expect = 4e-07
Identities = 14/109 (12%), Positives = 26/109 (23%), Gaps = 21/109 (19%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDG-----RISFQEFLDTVVLFSRGHTEDK--------- 1250
LG + G G + +++ + E
Sbjct: 49 NLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIR 108
Query: 1251 --LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+FD+ D D+NG I E ++ + E
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAAGI-----IQSSEDCEETFR 152
Score = 47.9 bits (114), Expect = 6e-06
Identities = 13/90 (14%), Positives = 24/90 (26%), Gaps = 16/90 (17%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDG-----RISFQEFLDTVVLFSRGHTEDK--------- 107
LG + G G + +++ + E
Sbjct: 49 NLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIR 108
Query: 108 --LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+FD+ D D+NG I E ++
Sbjct: 109 IWGDALFDIVDKDQNGAITLDEWKAYTKAA 138
Score = 43.6 bits (103), Expect = 2e-04
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV--LFSRGHTEDKL 108
+ E+ + G+ + F + D D G++ E + ++ +KL
Sbjct: 127 TLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKL 185
Score = 43.6 bits (103), Expect = 2e-04
Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV--LFSRGHTEDKL 1251
+ E+ + G+ + F + D D G++ E + ++ +KL
Sbjct: 127 TLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKL 185
Score = 42.5 bits (100), Expect = 5e-04
Identities = 13/77 (16%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDT---VVLFSRGH--TEDKLRIIFDMCDNDRNGV----- 122
+ MFN +D + +G+IS E + +V+ + G + K G+
Sbjct: 19 KHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVE 78
Query: 123 IDKGE-LAEMLRSLVEM 138
D + + +
Sbjct: 79 TDWPAYIEGWKKLATDE 95
Score = 41.3 bits (97), Expect = 0.001
Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQD-AGLDS 1466
+ + +F+ D + NG I E+ +V + ++ + F AG+
Sbjct: 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKY 75
Query: 1467 KDFLTYQDFKLMMRDYKGD 1485
+ + + D
Sbjct: 76 GVETDWPAYIEGWKKLATD 94
Score = 31.7 bits (72), Expect = 1.7
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 136
+ + +F+ D + NG I E+ +V
Sbjct: 16 GRHKHMFNFLDVNHNGKISLDEMVYKASDIV 46
>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma
lanceolatum} SCOP: a.39.1.5
Length = 185
Score = 64.2 bits (156), Expect = 2e-11
Identities = 14/122 (11%), Positives = 33/122 (27%), Gaps = 20/122 (16%)
Query: 1373 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK---------LRIIFDMCDNDRNG 1423
R + D + D +S++E+L + +F D +G
Sbjct: 61 EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120
Query: 1424 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYK 1483
++D E ++ L + + ++ K +K +
Sbjct: 121 IVDLEEFQNYCKNF-------QLQCAD----VPAVYNVITDGGKVTFDLNRYKELYYRLL 169
Query: 1484 GD 1485
Sbjct: 170 TS 171
Score = 60.3 bits (146), Expect = 4e-10
Identities = 20/166 (12%), Positives = 52/166 (31%), Gaps = 16/166 (9%)
Query: 1248 EDKLRIIFD-MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPREL 1306
+ K++ FD D + +G I + +M+ E+ + SL+D+ + + R+L
Sbjct: 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKG-SLSDADYKSMQASLEDEWRDL 65
Query: 1307 MLAKAETRERRQKKLEHFFREAYA-LTFGLKPGEKRRRDDETGEVVMRT-------SLSR 1358
+A+ + E + + + + + +
Sbjct: 66 K-GRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDL 124
Query: 1359 AEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF 1401
EF ++ V ++N++ G + +
Sbjct: 125 EEFQNYCKNFQLQCADV--PAVYNVITDGGKVTFDLNRYKELYYRL 168
Score = 54.9 bits (132), Expect = 3e-08
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ +F +D GDG + +EF + + ++++ + D E
Sbjct: 106 RIPFLFKGMDVSGDGIVDLEEF--QNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKE 163
Query: 131 MLRSLV 136
+ L+
Sbjct: 164 LYYRLL 169
Score = 54.9 bits (132), Expect = 3e-08
Identities = 10/66 (15%), Positives = 24/66 (36%), Gaps = 2/66 (3%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ +F +D GDG + +EF + + ++++ + D E
Sbjct: 106 RIPFLFKGMDVSGDGIVDLEEF--QNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKE 163
Query: 1274 MLRSLV 1279
+ L+
Sbjct: 164 LYYRLL 169
Score = 52.2 bits (125), Expect = 2e-07
Identities = 13/95 (13%), Positives = 30/95 (31%), Gaps = 16/95 (16%)
Query: 1214 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK---------LRIIFDMCDNDRNG 1264
R + D + D +S++E+L + +F D +G
Sbjct: 61 EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120
Query: 1265 VIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1299
++D E ++ L + V + + +
Sbjct: 121 IVDLEEFQNYCKNF-------QLQCADVPAVYNVI 148
Score = 51.1 bits (122), Expect = 6e-07
Identities = 11/74 (14%), Positives = 24/74 (32%), Gaps = 9/74 (12%)
Query: 71 FVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK---------LRIIFDMCDNDRNG 121
R + D + D +S++E+L + +F D +G
Sbjct: 61 EWRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDG 120
Query: 122 VIDKGELAEMLRSL 135
++D E ++
Sbjct: 121 IVDLEEFQNYCKNF 134
Score = 46.5 bits (110), Expect = 2e-05
Identities = 11/86 (12%), Positives = 34/86 (39%), Gaps = 7/86 (8%)
Query: 1407 EDKLRIIFD-MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD------SQVTELIDGMF 1459
+ K++ FD D + +G I + +M+ E+ + + + + + +
Sbjct: 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLK 66
Query: 1460 QDAGLDSKDFLTYQDFKLMMRDYKGD 1485
A ++ D ++++++ M
Sbjct: 67 GRADINKDDVVSWEEYLAMWEKTIAT 92
Score = 41.1 bits (96), Expect = 0.001
Identities = 14/119 (11%), Positives = 31/119 (26%), Gaps = 34/119 (28%)
Query: 1128 EGFLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-D 1186
E +L +K + +S +L Q ++ F+ D
Sbjct: 80 EEYLAMWEKTIATCKSVADL-------PAWCQNRIPFLFKGM---------------DVS 117
Query: 1187 ETGEVVMRTSLSRAEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF 1242
G + EF ++ V ++N++ G + +
Sbjct: 118 GDG------IVDLEEFQNYCKNFQLQCADV--PAVYNVITDGGKVTFDLNRYKELYYRL 168
Score = 39.9 bits (93), Expect = 0.003
Identities = 5/50 (10%), Positives = 14/50 (28%), Gaps = 5/50 (10%)
Query: 53 SLSRAEFA---SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLF 99
+ EF ++ V ++N++ G + +
Sbjct: 121 IVDLEEFQNYCKNFQLQCADV--PAVYNVITDGGKVTFDLNRYKELYYRL 168
Score = 34.9 bits (80), Expect = 0.15
Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 16/86 (18%)
Query: 72 VRMMFN-IVDKDGDGRISFQEF---LDTVVLFSRGHT------------EDKLRIIFDMC 115
++ F+ +D + DG I +F + ++G ED+ R +
Sbjct: 10 IKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRA 69
Query: 116 DNDRNGVIDKGELAEMLRSLVEMART 141
D +++ V+ E M + ++
Sbjct: 70 DINKDDVVSWEEYLAMWEKTIATCKS 95
Score = 34.1 bits (78), Expect = 0.22
Identities = 9/39 (23%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 105 EDKLRIIFD-MCDNDRNGVIDKGELAEMLRSLVEMARTS 142
+ K++ FD D + +G I + +M+ E+ + S
Sbjct: 7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGS 45
>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A
{Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B*
1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B
3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y
2otg_B* 2os8_B* 3pn7_B ...
Length = 156
Score = 63.3 bits (155), Expect = 2e-11
Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 27/133 (20%)
Query: 1350 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TE 1407
+ LG D M+ K+ G ++F FL G +E
Sbjct: 42 AISE----------QLGRAPDDKELTAML-----KEAPGPLNFTMFLSIFSDKLSGTDSE 86
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+ +R F M D ++ + ++L ++ + + ++ + G
Sbjct: 87 ETIRNAFAMFDEQETKKLNIEYIKDLLENMGD-----NFNKDEMRMTFKEAPVEGGK--- 138
Query: 1468 DFLTYQDFKLMMR 1480
Y F M++
Sbjct: 139 --FDYVKFTAMIK 149
Score = 54.1 bits (131), Expect = 3e-08
Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 22/109 (20%)
Query: 1191 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TE 1248
+ LG D M+ K+ G ++F FL G +E
Sbjct: 42 AISE----------QLGRAPDDKELTAML-----KEAPGPLNFTMFLSIFSDKLSGTDSE 86
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ +R F M D ++ + ++L ++ + + ++
Sbjct: 87 ETIRNAFAMFDEQETKKLNIEYIKDLLENMGD-----NFNKDEMRMTFK 130
Score = 48.3 bits (116), Expect = 3e-06
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 17/92 (18%)
Query: 48 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TE 105
+ LG D M+ K+ G ++F FL G +E
Sbjct: 42 AISE----------QLGRAPDDKELTAML-----KEAPGPLNFTMFLSIFSDKLSGTDSE 86
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+ +R F M D ++ + ++L ++ +
Sbjct: 87 ETIRNAFAMFDEQETKKLNIEYIKDLLENMGD 118
Score = 46.4 bits (111), Expect = 1e-05
Identities = 28/152 (18%), Positives = 51/152 (33%), Gaps = 41/152 (26%)
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---DG-----MFQSPREL 1306
F M D DR+G + K ++ + L D ++T ++ G MF +
Sbjct: 24 FSMIDVDRDGFVSKEDIKAISEQLGRA-----PDDKELTAMLKEAPGPLNFTMFL---SI 75
Query: 1307 MLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF---AS 1363
K + + R A+A+ F + ET L+
Sbjct: 76 FSDKLSGTDSEET-----IRNAFAM-F---------DEQETK------KLNIEYIKDLLE 114
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+G + +RM F +G G+ + +F
Sbjct: 115 NMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFT 145
Score = 38.3 bits (90), Expect = 0.006
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 13/66 (19%)
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F M D DR+G + K ++ + L D ++T ++ ++ L +
Sbjct: 24 FSMIDVDRDGFVSKEDIKAISEQLGRA-----PDDKELTAMLK--------EAPGPLNFT 70
Query: 1474 DFKLMM 1479
F +
Sbjct: 71 MFLSIF 76
Score = 36.0 bits (84), Expect = 0.043
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 112 FDMCDNDRNGVIDKGELAEMLRSL 135
F M D DR+G + K ++ + L
Sbjct: 24 FSMIDVDRDGFVSKEDIKAISEQL 47
Score = 29.0 bits (66), Expect = 8.1
Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 58 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ +G + +RM F +G G+ + +F
Sbjct: 111 DLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFT 145
Score = 29.0 bits (66), Expect = 8.1
Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 1201 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ +G + +RM F +G G+ + +F
Sbjct: 111 DLLENMGDNFNKDEMRMTFKEAPVEG-GKFDYVKFT 145
>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo
sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A
Length = 153
Score = 62.9 bits (154), Expect = 2e-11
Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 23/136 (16%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK 1409
MR +G + + + ++ + G + F +F++ + T D
Sbjct: 35 NCMR----------TMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADM 84
Query: 1410 -----LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
LR F D + +G I EL E +R+L+ + I+ + +D L
Sbjct: 85 IGVKELRDAFREFDTNGDGEISTSELREAMRALLGH----QVGH----RDIEEIIRDVDL 136
Query: 1465 DSKDFLTYQDFKLMMR 1480
+ + +++F MM
Sbjct: 137 NGDGRVDFEEFVRMMS 152
Score = 57.2 bits (139), Expect = 2e-09
Identities = 34/186 (18%), Positives = 62/186 (33%), Gaps = 57/186 (30%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
R F DKD DG I+ ++ + + G+ TE +L + + + G +D + E
Sbjct: 14 REAFREFDKDKDGYINCRDL--GNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 1274 MLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTF 1333
+ M K ++ R+A+ F
Sbjct: 72 L--------------------------------MGPKLLAETADMIGVKEL-RDAFRE-F 97
Query: 1334 GLKPGEKRRRDDETGEVVMRTSLSRAEFA----SALGMKSDAVFVRMMFNIVDKDGDGRI 1389
+ G +S +E + LG + + + VD +GDGR+
Sbjct: 98 D---------TNGDG------EISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRV 142
Query: 1390 SFQEFL 1395
F+EF+
Sbjct: 143 DFEEFV 148
Score = 55.6 bits (135), Expect = 8e-09
Identities = 21/112 (18%), Positives = 41/112 (36%), Gaps = 19/112 (16%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK 1250
MR +G + + + ++ + G + F +F++ + T D
Sbjct: 35 NCMR----------TMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADM 84
Query: 1251 -----LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
LR F D + +G I EL E +R+L+ + + E+I
Sbjct: 85 IGVKELRDAFREFDTNGDGEISTSELREAMRALLGH----QVGHRDIEEIIR 132
Score = 51.8 bits (125), Expect = 1e-07
Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 15/93 (16%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK 107
MR +G + + + ++ + G + F +F++ + T D
Sbjct: 35 NCMR----------TMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADM 84
Query: 108 -----LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
LR F D + +G I EL E +R+L
Sbjct: 85 IGVKELRDAFREFDTNGDGEISTSELREAMRAL 117
Score = 44.1 bits (105), Expect = 7e-05
Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
R F DKD DG I+ ++ + + G+ TE +L + + + G +D + E
Sbjct: 14 REAFREFDKDKDGYINCRDL--GNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVE 71
Query: 131 M 131
+
Sbjct: 72 L 72
Score = 39.1 bits (92), Expect = 0.004
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 61 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ LG + + + VD +GDGR+ F+EF+
Sbjct: 116 ALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 39.1 bits (92), Expect = 0.004
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 1204 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ LG + + + VD +GDGR+ F+EF+
Sbjct: 116 ALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 37.9 bits (89), Expect = 0.008
Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
LR F D D++G I+ +L +R++ M T+ ++ EL Q ++
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTMGYM-----PTEMELIELS----QQINMNLGGH 63
Query: 1470 LTYQDFKLMM 1479
+ + DF +M
Sbjct: 64 VDFDDFVELM 73
Score = 36.4 bits (85), Expect = 0.027
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
R F D +GDG IS E L + GH + I D + +G +D E
Sbjct: 91 RDAFREFDTNGDGEISTSE-LREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 149
Query: 131 MLR 133
M+
Sbjct: 150 MMS 152
Score = 36.4 bits (85), Expect = 0.027
Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
R F D +GDG IS E L + GH + I D + +G +D E
Sbjct: 91 RDAFREFDTNGDGEISTSE-LREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVR 149
Query: 1274 MLR 1276
M+
Sbjct: 150 MMS 152
Score = 32.5 bits (75), Expect = 0.63
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
LR F D D++G I+ +L +R++
Sbjct: 13 LREAFREFDKDKDGYINCRDLGNCMRTM 40
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata}
SCOP: a.39.1.4
Length = 109
Score = 61.4 bits (150), Expect = 3e-11
Identities = 21/101 (20%), Positives = 41/101 (40%), Gaps = 8/101 (7%)
Query: 1380 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439
I G ++ F V L +G T+ +++ +F++ D D++G I++ EL +L+
Sbjct: 15 ISAFKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA 72
Query: 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
R L D + D + +F M+
Sbjct: 73 HGRD--LND----TETKALLAAGDSDHDGKIGADEFAKMVA 107
Score = 56.0 bits (136), Expect = 2e-09
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 1221 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1280
I G ++ F V L +G T+ +++ +F++ D D++G I++ EL +L+
Sbjct: 15 ISAFKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA 72
Query: 1281 MARTTSLTDSQVTELID 1297
R L D++ L+
Sbjct: 73 HGRD--LNDTETKALLA 87
Score = 49.9 bits (120), Expect = 2e-07
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 78 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
I G ++ F V L +G T+ +++ +F++ D D++G I++ EL +L+
Sbjct: 15 ISAFKDPGTFDYKRFFHLVGL--KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSA 72
Query: 138 MART 141
R
Sbjct: 73 HGRD 76
Score = 42.2 bits (100), Expect = 1e-04
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 58 EF--ASALGMKSDAVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIF 112
F L K+DA V+ +F I+DKD G I +E L R + + + +
Sbjct: 28 RFFHLVGLKGKTDAQ-VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALL 86
Query: 113 DMCDNDRNGVIDKGELAEMLRS 134
D+D +G I E A+M+
Sbjct: 87 AAGDSDHDGKIGADEFAKMVAQ 108
Score = 42.2 bits (100), Expect = 1e-04
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 1201 EF--ASALGMKSDAVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIF 1255
F L K+DA V+ +F I+DKD G I +E L R + + + +
Sbjct: 28 RFFHLVGLKGKTDAQ-VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALL 86
Query: 1256 DMCDNDRNGVIDKGELAEMLRS 1277
D+D +G I E A+M+
Sbjct: 87 AAGDSDHDGKIGADEFAKMVAQ 108
Score = 42.2 bits (100), Expect = 1e-04
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 1360 EF--ASALGMKSDAVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIF 1414
F L K+DA V+ +F I+DKD G I +E L R + + + +
Sbjct: 28 RFFHLVGLKGKTDAQ-VKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALL 86
Query: 1415 DMCDNDRNGVIDKGELAEMLRS 1436
D+D +G I E A+M+
Sbjct: 87 AAGDSDHDGKIGADEFAKMVAQ 108
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase,
transferase, calcium-bindin binding, bumped kinase
inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum}
PDB: 3igo_A* 3ncg_A*
Length = 486
Score = 67.4 bits (165), Expect = 3e-11
Identities = 19/109 (17%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ + ++D DG G I + EF+ + + + + +++ F M D D +G I EL ++
Sbjct: 383 IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKL 442
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482
+S+ E ++ + + + + + +F M++++
Sbjct: 443 FS-----QADSSIQM----EELESIIEQVDNNKDGEVDFNEFVEMLQNF 482
Score = 54.7 bits (132), Expect = 2e-07
Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 5/85 (5%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ + ++D DG G I + EF+ + + + + +++ F M D D +G I EL ++
Sbjct: 383 IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKL 442
Query: 1275 LRSLVEMARTTSLTDSQVTELIDGM 1299
+S+ ++ +I+ +
Sbjct: 443 FS-----QADSSIQMEELESIIEQV 462
Score = 53.9 bits (130), Expect = 4e-07
Identities = 38/195 (19%), Positives = 67/195 (34%), Gaps = 45/195 (23%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELML 1308
+L IF D + +G++D+ EL + + S + Q
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEG-------------- 376
Query: 1309 AKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEF-ASALG 1366
+ +++ D D +G + EF ASA+
Sbjct: 377 ------STIEDQIDSLMPLL---------------DMDGSGSIEYS------EFIASAID 409
Query: 1367 MK--SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGV 1424
+ F + DKDG G+IS +E ++L I + DN+++G
Sbjct: 410 RTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGE 469
Query: 1425 IDKGELAEMLRSLVE 1439
+D E EML++ V
Sbjct: 470 VDFNEFVEMLQNFVR 484
Score = 53.5 bits (129), Expect = 5e-07
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ + ++D DG G I + EF+ + + + + +++ F M D D +G I EL ++
Sbjct: 383 IDSLMPLLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKL 442
Query: 132 LR 133
Sbjct: 443 FS 444
Score = 51.2 bits (123), Expect = 3e-06
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ F + DKDG G+IS +E ++L I + DN+++G +D E EM
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 132 LRSLVE 137
L++ V
Sbjct: 479 LQNFVR 484
Score = 51.2 bits (123), Expect = 3e-06
Identities = 20/66 (30%), Positives = 33/66 (50%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ F + DKDG G+IS +E ++L I + DN+++G +D E EM
Sbjct: 419 MERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEM 478
Query: 1275 LRSLVE 1280
L++ V
Sbjct: 479 LQNFVR 484
Score = 45.1 bits (107), Expect = 2e-04
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 14/69 (20%)
Query: 73 RMMFNIVDKDGDGRISFQEF--------------LDTVVLFSRGHTEDKLRIIFDMCDND 118
+F +D + DG + E ++++ ED++ + + D D
Sbjct: 334 TEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMD 393
Query: 119 RNGVIDKGE 127
+G I+ E
Sbjct: 394 GSGSIEYSE 402
Score = 45.1 bits (107), Expect = 2e-04
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 14/69 (20%)
Query: 1216 RMMFNIVDKDGDGRISFQEF--------------LDTVVLFSRGHTEDKLRIIFDMCDND 1261
+F +D + DG + E ++++ ED++ + + D D
Sbjct: 334 TEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMD 393
Query: 1262 RNGVIDKGE 1270
+G I+ E
Sbjct: 394 GSGSIEYSE 402
Score = 42.0 bits (99), Expect = 0.002
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Query: 54 LSRAEFASALG---MKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
+S E + + VD + DG + F EF++
Sbjct: 434 ISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVE 477
Score = 42.0 bits (99), Expect = 0.002
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Query: 1197 LSRAEFASALG---MKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
+S E + + VD + DG + F EF++
Sbjct: 434 ISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVE 477
Score = 34.3 bits (79), Expect = 0.43
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 5/73 (6%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTEL-----IDGMFQDA 1462
+L IF D + +G++D+ EL + + S + Q ID +
Sbjct: 331 KQLTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLL 390
Query: 1463 GLDSKDFLTYQDF 1475
+D + Y +F
Sbjct: 391 DMDGSGSIEYSEF 403
>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4
Length = 109
Score = 60.7 bits (148), Expect = 4e-11
Identities = 18/101 (17%), Positives = 43/101 (42%), Gaps = 8/101 (7%)
Query: 1380 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439
+ + +++ F V L + D ++ F + D D++G I++ EL L+
Sbjct: 16 LKACEAADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSA 73
Query: 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
AR +LTD++ + + D + ++ +++
Sbjct: 74 GAR--ALTDAETKAFL----KAGDSDGDGAIGVDEWAALVK 108
Score = 54.2 bits (131), Expect = 7e-09
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 1221 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1280
+ + +++ F V L + D ++ F + D D++G I++ EL L+
Sbjct: 16 LKACEAADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSA 73
Query: 1281 MARTTSLTDSQVTELID 1297
AR +LTD++ +
Sbjct: 74 GAR--ALTDAETKAFLK 88
Score = 48.4 bits (116), Expect = 1e-06
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Query: 78 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+ + +++ F V L + D ++ F + D D++G I++ EL L+
Sbjct: 16 LKACEAADSFNYKAFFAKVGL--TAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSA 73
Query: 138 MART 141
AR
Sbjct: 74 GARA 77
Score = 46.1 bits (110), Expect = 5e-06
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 58 EFASALGMKSD-AVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 113
F + +G+ + A ++ F ++D+D G I E FL +R T+ + +
Sbjct: 29 AFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLK 88
Query: 114 MCDNDRNGVIDKGELAEMLRS 134
D+D +G I E A ++++
Sbjct: 89 AGDSDGDGAIGVDEWAALVKA 109
Score = 46.1 bits (110), Expect = 5e-06
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 1201 EFASALGMKSD-AVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1256
F + +G+ + A ++ F ++D+D G I E FL +R T+ + +
Sbjct: 29 AFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLK 88
Query: 1257 MCDNDRNGVIDKGELAEMLRS 1277
D+D +G I E A ++++
Sbjct: 89 AGDSDGDGAIGVDEWAALVKA 109
Score = 46.1 bits (110), Expect = 5e-06
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Query: 1360 EFASALGMKSD-AVFVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1415
F + +G+ + A ++ F ++D+D G I E FL +R T+ + +
Sbjct: 29 AFFAKVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLK 88
Query: 1416 MCDNDRNGVIDKGELAEMLRS 1436
D+D +G I E A ++++
Sbjct: 89 AGDSDGDGAIGVDEWAALVKA 109
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding
protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A
2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A
1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Length = 108
Score = 60.3 bits (147), Expect = 6e-11
Identities = 22/97 (22%), Positives = 37/97 (38%), Gaps = 8/97 (8%)
Query: 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443
+EF V L + D ++ F + D D++G I++ EL L++ AR
Sbjct: 19 SAADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76
Query: 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
LTD D D + +F M++
Sbjct: 77 --LTD----AETKAFLADGDKDGDGMIGVDEFAAMIK 107
Score = 53.7 bits (130), Expect = 1e-08
Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 1225 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284
+EF V L + D ++ F + D D++G I++ EL L++ AR
Sbjct: 19 SAADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76
Query: 1285 TSLTDSQVTELID 1297
LTD++ +
Sbjct: 77 --LTDAETKAFLA 87
Score = 47.9 bits (115), Expect = 1e-06
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 82 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 141
+EF V L + D ++ F + D D++G I++ EL L++ AR
Sbjct: 19 SAADSFKHKEFFAKVGL--ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARA 76
Score = 43.7 bits (104), Expect = 4e-05
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 58 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 113
EF + +G+ S ++ V+ F ++D+D G I E FL +R T+ + +
Sbjct: 28 EFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLA 87
Query: 114 MCDNDRNGVIDKGELAEMLRS 134
D D +G+I E A M+++
Sbjct: 88 DGDKDGDGMIGVDEFAAMIKA 108
Score = 43.7 bits (104), Expect = 4e-05
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 1201 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1256
EF + +G+ S ++ V+ F ++D+D G I E FL +R T+ + +
Sbjct: 28 EFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLA 87
Query: 1257 MCDNDRNGVIDKGELAEMLRS 1277
D D +G+I E A M+++
Sbjct: 88 DGDKDGDGMIGVDEFAAMIKA 108
Score = 43.7 bits (104), Expect = 4e-05
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 1360 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1415
EF + +G+ S ++ V+ F ++D+D G I E FL +R T+ + +
Sbjct: 28 EFFAKVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLA 87
Query: 1416 MCDNDRNGVIDKGELAEMLRS 1436
D D +G+I E A M+++
Sbjct: 88 DGDKDGDGMIGVDEFAAMIKA 108
Score = 36.4 bits (85), Expect = 0.013
Identities = 11/45 (24%), Positives = 12/45 (26%), Gaps = 6/45 (13%)
Query: 55 SRAEFASAL------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
E L + DKDGDG I EF
Sbjct: 59 EEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 103
Score = 36.4 bits (85), Expect = 0.013
Identities = 11/45 (24%), Positives = 12/45 (26%), Gaps = 6/45 (13%)
Query: 1198 SRAEFASAL------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
E L + DKDGDG I EF
Sbjct: 59 EEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 103
Score = 36.4 bits (85), Expect = 0.013
Identities = 11/45 (24%), Positives = 12/45 (26%), Gaps = 6/45 (13%)
Query: 1357 SRAEFASAL------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
E L + DKDGDG I EF
Sbjct: 59 EEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFA 103
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V,
chicken, molecular motor, ATPase, ELC, IQ motif, muscle
protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP:
a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B*
1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Length = 151
Score = 61.1 bits (149), Expect = 8e-11
Identities = 30/135 (22%), Positives = 53/135 (39%), Gaps = 25/135 (18%)
Query: 1350 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNI-VDKDGDGRISFQEFLD---TVVLFSRG 1404
VMR ALG ++A ++++ N D+ R+ F+ FL V
Sbjct: 34 DVMR----------ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ 83
Query: 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
T + F + D + NG + EL +L +L E +T+ +V ++
Sbjct: 84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE-----KMTEEEVETVL-----AGHE 133
Query: 1465 DSKDFLTYQDFKLMM 1479
DS + Y+ F +
Sbjct: 134 DSNGCINYEAFLKHI 148
Score = 56.8 bits (138), Expect = 3e-09
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 20/113 (17%)
Query: 1191 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNI-VDKDGDGRISFQEFLD---TVVLFSRG 1245
VMR ALG ++A ++++ N D+ R+ F+ FL V
Sbjct: 34 DVMR----------ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ 83
Query: 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
T + F + D + NG + EL +L +L E +T+ +V ++ G
Sbjct: 84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE-----KMTEEEVETVLAG 131
Score = 51.1 bits (123), Expect = 2e-07
Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 15/95 (15%)
Query: 48 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNI-VDKDGDGRISFQEFLD---TVVLFSRG 102
VMR ALG ++A ++++ N D+ R+ F+ FL V
Sbjct: 34 DVMR----------ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQ 83
Query: 103 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
T + F + D + NG + EL +L +L E
Sbjct: 84 GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGE 118
Score = 45.7 bits (109), Expect = 2e-05
Identities = 27/156 (17%), Positives = 62/156 (39%), Gaps = 33/156 (21%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---------DGM-- 1299
+ F++ D +G I + +++R+L + T+++V +++
Sbjct: 12 FKEAFELFDRVGDGKILYSQCGDVMRALGQN-----PTNAEVLKVLGNPKSDELKSRRVD 66
Query: 1300 FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRA 1359
F++ ++ A A+ R + + + + E + + F + G VM L
Sbjct: 67 FETFLPMLQAVAKNRGQGTYE-D--YLEGFRV-F---------DKEGNG-KVMGAELRHV 112
Query: 1360 EFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ LG K V + +D +G I+++ FL
Sbjct: 113 --LTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFL 145
Score = 38.7 bits (91), Expect = 0.005
Identities = 10/76 (13%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F++ D +G I + +++R+L + T+++V +++ +
Sbjct: 12 FKEAFELFDRVGDGKILYSQCGDVMRALGQN-----PTNAEVLKVLGNP--KSDELKSRR 64
Query: 1470 LTYQDFKLMMRDYKGD 1485
+ ++ F M++ +
Sbjct: 65 VDFETFLPMLQAVAKN 80
Score = 33.7 bits (78), Expect = 0.25
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F++ D +G I + +++R+L
Sbjct: 12 FKEAFELFDRVGDGKILYSQCGDVMRAL 39
Score = 31.0 bits (71), Expect = 1.7
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ G VM L + LG K V + +D +G I+++ FL
Sbjct: 98 KEGNG-KVMGAELRHV--LTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFL 145
Score = 31.0 bits (71), Expect = 1.7
Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 4/52 (7%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ G VM L + LG K V + +D +G I+++ FL
Sbjct: 98 KEGNG-KVMGAELRHV--LTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFL 145
>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP:
a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A
Length = 108
Score = 59.2 bits (144), Expect = 1e-10
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 8/97 (8%)
Query: 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443
Q+F T L + +++ IF DND++G +D EL L+ AR
Sbjct: 19 QDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76
Query: 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
LT+S+ L+D A D + +F+ M+
Sbjct: 77 --LTESETKSLMD----AADNDGDGKIGADEFQEMVH 107
Score = 55.0 bits (133), Expect = 5e-09
Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 1225 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284
Q+F T L + +++ IF DND++G +D EL L+ AR
Sbjct: 19 QDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE 76
Query: 1285 TSLTDSQVTELID 1297
LT+S+ L+D
Sbjct: 77 --LTESETKSLMD 87
Score = 53.4 bits (129), Expect = 1e-08
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 53 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 108
+ +F G+ + V+ +F +D D G + E FL +R TE +
Sbjct: 23 TFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET 82
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRS 134
+ + D DND +G I E EM+ S
Sbjct: 83 KSLMDAADNDGDGKIGADEFQEMVHS 108
Score = 53.4 bits (129), Expect = 1e-08
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 1196 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 1251
+ +F G+ + V+ +F +D D G + E FL +R TE +
Sbjct: 23 TFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET 82
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ + D DND +G I E EM+ S
Sbjct: 83 KSLMDAADNDGDGKIGADEFQEMVHS 108
Score = 53.4 bits (129), Expect = 1e-08
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 1355 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 1410
+ +F G+ + V+ +F +D D G + E FL +R TE +
Sbjct: 23 TFEPQKFFQTSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET 82
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ + D DND +G I E EM+ S
Sbjct: 83 KSLMDAADNDGDGKIGADEFQEMVHS 108
Score = 46.9 bits (112), Expect = 3e-06
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 82 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 140
Q+F T L + +++ IF DND++G +D EL L+ AR
Sbjct: 19 QDPDTFEPQKFFQTSGL--SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDAR 75
>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium
binding protein; NMR {Gallus gallus} PDB: 2kyf_A
Length = 108
Score = 59.2 bits (144), Expect = 1e-10
Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 8/101 (7%)
Query: 1380 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1439
+ D S ++F + + +L+ IF + DND++G I++ EL L+
Sbjct: 15 LRDCQAPDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFES 72
Query: 1440 MARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
AR LT S+ + A D + ++F+ M++
Sbjct: 73 GARV--LTASETKTFL----AAADHDGDGKIGAEEFQEMVQ 107
Score = 53.1 bits (128), Expect = 2e-08
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Query: 1221 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 1280
+ D S ++F + + +L+ IF + DND++G I++ EL L+
Sbjct: 15 LRDCQAPDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFES 72
Query: 1281 MARTTSLTDSQVTELID 1297
AR LT S+ +
Sbjct: 73 GARV--LTASETKTFLA 87
Score = 51.5 bits (124), Expect = 7e-08
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 53 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 108
S S +F GM + ++ +F I+D D G I E FL +R T +
Sbjct: 23 SFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASET 82
Query: 109 RIIFDMCDNDRNGVIDKGELAEMLRS 134
+ D+D +G I E EM++S
Sbjct: 83 KTFLAAADHDGDGKIGAEEFQEMVQS 108
Score = 51.5 bits (124), Expect = 7e-08
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 1196 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 1251
S S +F GM + ++ +F I+D D G I E FL +R T +
Sbjct: 23 SFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASET 82
Query: 1252 RIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ D+D +G I E EM++S
Sbjct: 83 KTFLAAADHDGDGKIGAEEFQEMVQS 108
Score = 51.5 bits (124), Expect = 7e-08
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 1355 SLSRAEFASALGMKSDAVF-VRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKL 1410
S S +F GM + ++ +F I+D D G I E FL +R T +
Sbjct: 23 SFSPKKFFQISGMSKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASET 82
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ D+D +G I E EM++S
Sbjct: 83 KTFLAAADHDGDGKIGAEEFQEMVQS 108
Score = 46.1 bits (110), Expect = 5e-06
Identities = 16/64 (25%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 78 IVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+ D S ++F + + +L+ IF + DND++G I++ EL L+
Sbjct: 15 LRDCQAPDSFSPKKFFQISGM--SKKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFES 72
Query: 138 MART 141
AR
Sbjct: 73 GARV 76
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus
gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F*
1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C*
1o1g_C*
Length = 149
Score = 60.6 bits (148), Expect = 1e-10
Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 25/135 (18%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD--GDGRISFQEFLD---TVVLFSRG 1404
+ R ALG + + K+ I+F+EFL
Sbjct: 32 DIAR----------ALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQ 81
Query: 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
T + + D + NG + EL +L +L E +T+ +V EL+ G Q+
Sbjct: 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE-----KMTEEEVEELMKG--QE--- 131
Query: 1465 DSKDFLTYQDFKLMM 1479
DS + Y+ F +
Sbjct: 132 DSNGCINYEAFVKHI 146
Score = 57.2 bits (139), Expect = 2e-09
Identities = 24/113 (21%), Positives = 40/113 (35%), Gaps = 20/113 (17%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD--GDGRISFQEFLD---TVVLFSRG 1245
+ R ALG + + K+ I+F+EFL
Sbjct: 32 DIAR----------ALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQ 81
Query: 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
T + + D + NG + EL +L +L E +T+ +V EL+ G
Sbjct: 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGE-----KMTEEEVEELMKG 129
Score = 50.2 bits (121), Expect = 4e-07
Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 15/93 (16%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD--GDGRISFQEFLD---TVVLFSRG 102
+ R ALG + + K+ I+F+EFL
Sbjct: 32 DIAR----------ALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQ 81
Query: 103 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
T + + D + NG + EL +L +L
Sbjct: 82 GTFEDFVEGLRVFDKEGNGTVMGAELRHVLATL 114
Score = 44.8 bits (107), Expect = 4e-05
Identities = 23/159 (14%), Positives = 55/159 (34%), Gaps = 39/159 (24%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPR------ 1304
+ F + D + I ++ ++ R+L + T++++ +++ +
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARALGQN-----PTNAEINKILGNPSKEEMNAAAIT 64
Query: 1305 -----ELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRA 1359
++ A A ++ + F E + F + G V A
Sbjct: 65 FEEFLPMLQAAANNKD---QGTFEDFVEGLRV-F---------DKEGNGTV------MGA 105
Query: 1360 EF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
E + LG K V + +D +G I+++ F+
Sbjct: 106 ELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFV 143
Score = 39.8 bits (94), Expect = 0.002
Identities = 9/76 (11%), Positives = 33/76 (43%), Gaps = 7/76 (9%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F + D + I ++ ++ R+L + T++++ +++ +
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARALGQN-----PTNAEINKILGNP--SKEEMNAAA 62
Query: 1470 LTYQDFKLMMRDYKGD 1485
+T+++F M++ +
Sbjct: 63 ITFEEFLPMLQAAANN 78
Score = 34.4 bits (80), Expect = 0.14
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D + I ++ ++ R+L
Sbjct: 10 FKEAFLLFDRTGDAKITASQVGDIARAL 37
Score = 33.7 bits (78), Expect = 0.24
Identities = 13/61 (21%), Positives = 23/61 (37%), Gaps = 6/61 (9%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDR--NGVIDKGELAEM 131
F + D+ GD +I+ + D + + G T ++ I + I E M
Sbjct: 14 FLLFDRTGDAKITASQVGD--IARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPM 71
Query: 132 L 132
L
Sbjct: 72 L 72
Score = 29.0 bits (66), Expect = 8.2
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 10/55 (18%)
Query: 42 DDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ G V AE + LG K V + +D +G I+++ F+
Sbjct: 96 KEGNGTV------MGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFV 143
Score = 29.0 bits (66), Expect = 8.2
Identities = 12/55 (21%), Positives = 21/55 (38%), Gaps = 10/55 (18%)
Query: 1185 DDETGEVVMRTSLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ G V AE + LG K V + +D +G I+++ F+
Sbjct: 96 KEGNGTV------MGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFV 143
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like,
squid, contractIle protein; 2.60A {Todarodes pacificus}
PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Length = 153
Score = 60.6 bits (148), Expect = 1e-10
Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 33/136 (24%)
Query: 1350 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----G 1404
+ +LG D M+ K+ G+++F FL LF
Sbjct: 40 DMFS----------SLGRVPPDDELNAML-----KECPGQLNFTAFLT---LFGEKVSGT 81
Query: 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
ED LR F M D D G I + L ++L ++ + + + ++ +
Sbjct: 82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGD-----NFSKEEIKNVWKDAPLKNKQ 136
Query: 1465 DSKDFLTYQDFKLMMR 1480
Y +
Sbjct: 137 -----FNYNKMVDIKG 147
Score = 53.3 bits (129), Expect = 5e-08
Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 28/112 (25%)
Query: 1191 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----G 1245
+ +LG D M+ K+ G+++F FL LF
Sbjct: 40 DMFS----------SLGRVPPDDELNAML-----KECPGQLNFTAFLT---LFGEKVSGT 81
Query: 1246 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
ED LR F M D D G I + L ++L ++ + + + ++ +
Sbjct: 82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGD-----NFSKEEIKNVWK 128
Score = 47.1 bits (113), Expect = 6e-06
Identities = 23/95 (24%), Positives = 36/95 (37%), Gaps = 23/95 (24%)
Query: 48 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----G 102
+ +LG D M+ K+ G+++F FL LF
Sbjct: 40 DMFS----------SLGRVPPDDELNAML-----KECPGQLNFTAFLT---LFGEKVSGT 81
Query: 103 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
ED LR F M D D G I + L ++L ++ +
Sbjct: 82 DPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGD 116
Score = 46.7 bits (112), Expect = 8e-06
Identities = 23/156 (14%), Positives = 49/156 (31%), Gaps = 41/156 (26%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---DG-----MFQS 1302
L+ F M D DR+G I +L +M SL + D ++ ++ G F
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRV-----PPDDELNAMLKECPGQLNFTAFL- 71
Query: 1303 PRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEF- 1361
L K + R A+++ F +D G +
Sbjct: 72 --TLFGEKVSGTDPEDA-----LRNAFSM-F---------DEDGQG------FIPEDYLK 108
Query: 1362 --ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+G ++ ++ + + ++ + +
Sbjct: 109 DLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMV 143
Score = 39.4 bits (93), Expect = 0.003
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 12/75 (16%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
L+ F M D DR+G I +L +M SL + D ++ ++ L+ F
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSLGRV-----PPDDELNAMLKEC--PGQLNFTAF 70
Query: 1470 LTYQDFKLMMRDYKG 1484
LT L G
Sbjct: 71 LT-----LFGEKVSG 80
Score = 36.3 bits (85), Expect = 0.033
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
L+ F M D DR+G I +L +M SL
Sbjct: 18 LKEAFTMIDQDRDGFIGMEDLKDMFSSL 45
Score = 29.0 bits (66), Expect = 8.5
Identities = 0/22 (0%), Positives = 10/22 (45%), Gaps = 1/22 (4%)
Query: 72 VRMMFNIVDKDGDGRISFQEFL 93
++ ++ + + ++ + +
Sbjct: 123 IKNVWKDAPLK-NKQFNYNKMV 143
Score = 29.0 bits (66), Expect = 8.5
Identities = 0/22 (0%), Positives = 10/22 (45%), Gaps = 1/22 (4%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFL 1236
++ ++ + + ++ + +
Sbjct: 123 IKNVWKDAPLK-NKQFNYNKMV 143
>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca
binding, EF-hand, luminescent protein; HET: CZH; 1.10A
{Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A*
1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*
Length = 195
Score = 61.3 bits (149), Expect = 2e-10
Identities = 23/194 (11%), Positives = 50/194 (25%), Gaps = 58/194 (29%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDT---VVLFSRGH--TEDKLR-----IIFDMCDNDRNGV 1265
+ MF+ +D +G+G+I+ E + + + K F C +
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFF 1325
I + + + + + ++ + F
Sbjct: 83 IAFPQFLDG------WKQLATSELKKWAR-----------------NEPTLIREWGDAVF 119
Query: 1326 REAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEFASA---LGMKSDAVFVRMMFNIV 1381
F D D +G +++ E+ + G+ F
Sbjct: 120 DI-----F----------DKDGSG------TITLDEWKAYGKISGISPSQEDCEATFRHC 158
Query: 1382 DKDGDGRISFQEFL 1395
D D G + E
Sbjct: 159 DLDNAGDLDVDEMT 172
Score = 58.6 bits (142), Expect = 1e-09
Identities = 21/135 (15%), Positives = 37/135 (27%), Gaps = 25/135 (18%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDG-----RISFQEFLDTVVLFSRGH-----------TE 1407
L + + G G I+F +FLD +
Sbjct: 53 KLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIR 112
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
+ +FD+ D D +G I E + S + E + F+ LD+
Sbjct: 113 EWGDAVFDIFDKDGSGTITLDEWKAYGKISGI-----SPSQ----EDCEATFRHCDLDNA 163
Query: 1468 DFLTYQDFKLMMRDY 1482
L + +
Sbjct: 164 GDLDVDEMTRQHLGF 178
Score = 50.9 bits (122), Expect = 7e-07
Identities = 16/109 (14%), Positives = 27/109 (24%), Gaps = 21/109 (19%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDG-----RISFQEFLDTVVLFSRGH-----------TE 1248
L + + G G I+F +FLD +
Sbjct: 53 KLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIR 112
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ +FD+ D D +G I E + S +
Sbjct: 113 EWGDAVFDIFDKDGSGTITLDEWKAYGKISGI-----SPSQEDCEATFR 156
Score = 45.9 bits (109), Expect = 4e-05
Identities = 15/90 (16%), Positives = 25/90 (27%), Gaps = 16/90 (17%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDG-----RISFQEFLDTVVLFSRGH-----------TE 105
L + + G G I+F +FLD +
Sbjct: 53 KLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIR 112
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ +FD+ D D +G I E +
Sbjct: 113 EWGDAVFDIFDKDGSGTITLDEWKAYGKIS 142
Score = 44.7 bits (106), Expect = 7e-05
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+F+I DKDG G I+ E+ + +++ F CD D G +D E+
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQH 175
Query: 133 R 133
Sbjct: 176 L 176
Score = 44.7 bits (106), Expect = 7e-05
Identities = 16/61 (26%), Positives = 26/61 (42%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+F+I DKDG G I+ E+ + +++ F CD D G +D E+
Sbjct: 116 DAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQH 175
Query: 1276 R 1276
Sbjct: 176 L 176
Score = 43.6 bits (103), Expect = 2e-04
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 10/78 (12%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDT---VVLFSRGH--TEDKLR-----IIFDMCDNDRNGV 122
+ MF+ +D +G+G+I+ E + + + K F C +
Sbjct: 23 KHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKE 82
Query: 123 IDKGELAEMLRSLVEMAR 140
I + + + L
Sbjct: 83 IAFPQFLDGWKQLATSEL 100
Score = 42.8 bits (101), Expect = 4e-04
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 3/42 (7%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ E+ + G+ F D D G + E
Sbjct: 131 TLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Score = 42.8 bits (101), Expect = 4e-04
Identities = 7/42 (16%), Positives = 12/42 (28%), Gaps = 3/42 (7%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ E+ + G+ F D D G + E
Sbjct: 131 TLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Score = 39.0 bits (91), Expect = 0.007
Identities = 10/74 (13%), Positives = 26/74 (35%), Gaps = 1/74 (1%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA-GLDS 1466
+ + +FD D + NG I E+ + + ++ ++ F G++
Sbjct: 20 KRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEY 79
Query: 1467 KDFLTYQDFKLMMR 1480
+ + F +
Sbjct: 80 GKEIAFPQFLDGWK 93
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand;
1.75A {Physarum polycephalum}
Length = 145
Score = 59.8 bits (146), Expect = 2e-10
Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 24/132 (18%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTE 1407
+R +LG + + ++ F + +
Sbjct: 29 SALR----------SLGKNPTNAELNTIKGQLNAKE---FDLATFKTVYRKPIKTPTEQS 75
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
++ F D + NG I + EL ++L +L + +LT S+V E + ++ +
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGD-----ALTSSEVEE----LMKEVSVSGD 126
Query: 1468 DFLTYQDFKLMM 1479
+ Y+ F M+
Sbjct: 127 GAINYESFVDML 138
Score = 56.8 bits (138), Expect = 2e-09
Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 36/159 (22%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-----DGM-F 1300
+ D+++ F + D D +G + EL LRSL + T++++ +
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKN-----PTNAELNTIKGQLNAKEFDL 57
Query: 1301 QSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAE 1360
+ + + +T + K++ FR + G + AE
Sbjct: 58 ATFKTVYRKPIKTPTEQSKEMLDAFRA-----L---------DKEGNGTI------QEAE 97
Query: 1361 F---ASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFL 1395
LG + + V + V GDG I+++ F+
Sbjct: 98 LRQLLLNLGDALTSSE-VEELMKEVSVSGDGAINYESFV 135
Score = 52.9 bits (128), Expect = 5e-08
Identities = 19/110 (17%), Positives = 38/110 (34%), Gaps = 20/110 (18%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTE 1248
+R +LG + + ++ F + +
Sbjct: 29 SALR----------SLGKNPTNAELNTIKGQLNAKE---FDLATFKTVYRKPIKTPTEQS 75
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
++ F D + NG I + EL ++L +L + +LT S+V EL+
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGD-----ALTSSEVEELMKE 120
Score = 46.0 bits (110), Expect = 1e-05
Identities = 13/90 (14%), Positives = 28/90 (31%), Gaps = 15/90 (16%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD--TVVLFSRGHTE 105
+R +LG + + ++ F + +
Sbjct: 29 SALR----------SLGKNPTNAELNTIKGQLNAKE---FDLATFKTVYRKPIKTPTEQS 75
Query: 106 DKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++ F D + NG I + EL ++L +L
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNL 105
Score = 42.5 bits (101), Expect = 2e-04
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+ D+++ F + D D +G + EL LRSL + T++++ +
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKN-----PTNAELNTIK----GQLNAK 53
Query: 1466 SKDFLTYQDFKLMM 1479
D FK +
Sbjct: 54 EFDL---ATFKTVY 64
Score = 36.7 bits (86), Expect = 0.019
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ D+++ F + D D +G + EL LRSL
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSL 34
Score = 36.7 bits (86), Expect = 0.019
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F +DK+G+G I E +L + G T ++ + +G I+ +ML
Sbjct: 82 FRALDKEGNGTIQEAELRQ--LLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLV 139
Query: 134 S 134
+
Sbjct: 140 T 140
Score = 36.7 bits (86), Expect = 0.019
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F +DK+G+G I E +L + G T ++ + +G I+ +ML
Sbjct: 82 FRALDKEGNGTIQEAELRQ--LLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLV 139
Query: 1277 S 1277
+
Sbjct: 140 T 140
Score = 35.6 bits (83), Expect = 0.046
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 72 VRMMFNIVDKDGDGRISFQEFL 93
V + V GDG I+++ F+
Sbjct: 114 VEELMKEVSVSGDGAINYESFV 135
Score = 35.6 bits (83), Expect = 0.046
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFL 1236
V + V GDG I+++ F+
Sbjct: 114 VEELMKEVSVSGDGAINYESFV 135
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation,
calcium, metal binding protein; 1.95A {Gallus gallus}
PDB: 2kqy_A
Length = 109
Score = 57.7 bits (140), Expect = 4e-10
Identities = 20/97 (20%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Query: 1384 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1443
+++ F TV L T D+++ +F + D D++G I++ EL L++ AR
Sbjct: 20 QAADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR- 76
Query: 1444 TSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
LT ++ D + ++F+ +++
Sbjct: 77 -VLTSAETKA----FLAAGDTDGDGKIGVEEFQSLVK 108
Score = 53.0 bits (128), Expect = 2e-08
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 1225 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 1284
+++ F TV L T D+++ +F + D D++G I++ EL L++ AR
Sbjct: 20 QAADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSAR- 76
Query: 1285 TSLTDSQVTELID 1297
LT ++ +
Sbjct: 77 -VLTSAETKAFLA 88
Score = 47.6 bits (114), Expect = 1e-06
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 58 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 113
F S +G+ S ++ +F I+D+D G I +E FL +R T + +
Sbjct: 29 SFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLA 88
Query: 114 MCDNDRNGVIDKGELAEMLRS 134
D D +G I E ++++
Sbjct: 89 AGDTDGDGKIGVEEFQSLVKA 109
Score = 47.6 bits (114), Expect = 1e-06
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 1201 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1256
F S +G+ S ++ +F I+D+D G I +E FL +R T + +
Sbjct: 29 SFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLA 88
Query: 1257 MCDNDRNGVIDKGELAEMLRS 1277
D D +G I E ++++
Sbjct: 89 AGDTDGDGKIGVEEFQSLVKA 109
Score = 47.6 bits (114), Expect = 1e-06
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 4/81 (4%)
Query: 1360 EFASALGMKSDAV-FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHTEDKLRIIFD 1415
F S +G+ S ++ +F I+D+D G I +E FL +R T + +
Sbjct: 29 SFFSTVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLA 88
Query: 1416 MCDNDRNGVIDKGELAEMLRS 1436
D D +G I E ++++
Sbjct: 89 AGDTDGDGKIGVEEFQSLVKA 109
Score = 46.9 bits (112), Expect = 3e-06
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 82 DGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 141
+++ F TV L T D+++ +F + D D++G I++ EL L++ AR
Sbjct: 20 QAADSFNYKSFFSTVGL--SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARV 77
Score = 37.6 bits (88), Expect = 0.005
Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 55 SRAEFASAL---GMKSDAV---FVRMMFNIVDKDGDGRISFQEFL 93
E L + + + D DGDG+I +EF
Sbjct: 60 EEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 104
Score = 37.6 bits (88), Expect = 0.005
Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 1198 SRAEFASAL---GMKSDAV---FVRMMFNIVDKDGDGRISFQEFL 1236
E L + + + D DGDG+I +EF
Sbjct: 60 EEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 104
Score = 37.6 bits (88), Expect = 0.005
Identities = 10/45 (22%), Positives = 15/45 (33%), Gaps = 6/45 (13%)
Query: 1357 SRAEFASAL---GMKSDAV---FVRMMFNIVDKDGDGRISFQEFL 1395
E L + + + D DGDG+I +EF
Sbjct: 60 EEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 104
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle,
myosin subfragment 2, heavy meromyosin, essential light
chain; 20.00A {Avicularia avicularia}
Length = 196
Score = 60.0 bits (146), Expect = 5e-10
Identities = 21/136 (15%), Positives = 43/136 (31%), Gaps = 33/136 (24%)
Query: 1350 VVMRTSLSRAEFASALGMK-SDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR----G 1404
+LG ++ M+ + G I+F FL +F
Sbjct: 81 ATFD----------SLGRLCTEQELDSMV-----AEAPGPINFTMFLT---IFGDRIAGT 122
Query: 1405 HTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGL 1464
ED + F++ D +G + L L + E + +V + +A +
Sbjct: 123 DEEDVIVNAFNLFDEG-DGKCKEETLKRSLTTWGE-----KFSQDEVDQ----ALSEAPI 172
Query: 1465 DSKDFLTYQDFKLMMR 1480
D + + F ++
Sbjct: 173 DGNGLIDIKKFAQILT 188
Score = 53.9 bits (130), Expect = 7e-08
Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 35/149 (23%)
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---DG-----MFQSPREL 1306
F + D D++G I K ++ SL + T+ ++ ++ G MF +
Sbjct: 63 FQLIDQDKDGFISKNDIRATFDSLGRL-----CTEQELDSMVAEAPGPINFTMFL---TI 114
Query: 1307 MLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG 1366
E A+ L F D+ G +L R+ + G
Sbjct: 115 F-----GDRIAGTDEEDVIVNAFNL-F----------DEGDG-KCKEETLKRS--LTTWG 155
Query: 1367 MKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
K V + DG+G I ++F
Sbjct: 156 EKFSQDEVDQALSEAPIDGNGLIDIKKFA 184
Score = 45.0 bits (107), Expect = 6e-05
Identities = 20/120 (16%), Positives = 35/120 (29%), Gaps = 45/120 (37%)
Query: 1216 RMMFNIVDKDGDGRIS--------------------------------FQEFLDTVVLFS 1243
+ F ++D+D DG IS F FL +F
Sbjct: 60 KEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLT---IFG 116
Query: 1244 R----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM 1299
ED + F++ D +G + L L + E + +V + +
Sbjct: 117 DRIAGTDEEDVIVNAFNLFDEG-DGKCKEETLKRSLTTWGE-----KFSQDEVDQALSEA 170
Score = 38.4 bits (90), Expect = 0.009
Identities = 19/101 (18%), Positives = 30/101 (29%), Gaps = 40/101 (39%)
Query: 73 RMMFNIVDKDGDGRIS--------------------------------FQEFLDTVVLFS 100
+ F ++D+D DG IS F FL +F
Sbjct: 60 KEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGPINFTMFLT---IFG 116
Query: 101 R----GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
ED + F++ D +G + L L + E
Sbjct: 117 DRIAGTDEEDVIVNAFNLFDEG-DGKCKEETLKRSLTTWGE 156
Score = 38.1 bits (89), Expect = 0.015
Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 13/66 (19%)
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
F + D D++G I K ++ SL + T+ ++ ++ ++ + +
Sbjct: 63 FQLIDQDKDGFISKNDIRATFDSLGRL-----CTEQELDSMVA--------EAPGPINFT 109
Query: 1474 DFKLMM 1479
F +
Sbjct: 110 MFLTIF 115
Score = 36.5 bits (85), Expect = 0.049
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 42 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
D+ G +L R+ + G K V + DG+G I ++F
Sbjct: 136 DEGDG-KCKEETLKRS--LTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFA 184
Score = 36.5 bits (85), Expect = 0.049
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 1185 DDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
D+ G +L R+ + G K V + DG+G I ++F
Sbjct: 136 DEGDG-KCKEETLKRS--LTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFA 184
Score = 33.1 bits (76), Expect = 0.61
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 129
+ FN+ D +GDG+ + L + G ++D++ D NG+ID + A
Sbjct: 128 IVNAFNLFD-EGDGKCKEETLKR--SLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFA 184
Query: 130 EMLR 133
++L
Sbjct: 185 QILT 188
Score = 33.1 bits (76), Expect = 0.61
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELA 1272
+ FN+ D +GDG+ + L + G ++D++ D NG+ID + A
Sbjct: 128 IVNAFNLFD-EGDGKCKEETLKR--SLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFA 184
Query: 1273 EMLR 1276
++L
Sbjct: 185 QILT 188
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding
domain, structural genomics, structural genomics
consortium, SGC; 2.30A {Homo sapiens}
Length = 91
Score = 57.0 bits (138), Expect = 6e-10
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+R +F D + GR+ +EF + +F D DR+G I E A
Sbjct: 29 LRSVFAACDANRSGRLEREEF--RALCTELRVRPADAEAVFQRLDADRDGAITFQEFARG 86
Query: 132 LR 133
Sbjct: 87 FL 88
Score = 57.0 bits (138), Expect = 6e-10
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+R +F D + GR+ +EF + +F D DR+G I E A
Sbjct: 29 LRSVFAACDANRSGRLEREEF--RALCTELRVRPADAEAVFQRLDADRDGAITFQEFARG 86
Query: 1275 LR 1276
Sbjct: 87 FL 88
Score = 57.0 bits (138), Expect = 6e-10
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+R +F D + GR+ +EF + +F D DR+G I E A
Sbjct: 29 LRSVFAACDANRSGRLEREEF--RALCTELRVRPADAEAVFQRLDADRDGAITFQEFARG 86
Query: 1434 LR 1435
Sbjct: 87 FL 88
Score = 52.4 bits (126), Expect = 2e-08
Identities = 15/74 (20%), Positives = 29/74 (39%), Gaps = 11/74 (14%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
+LR +F CD +R+G +++ E + L + + +FQ D
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRALCTEL-------RVRPADAEA----VFQRLDADR 74
Query: 1467 KDFLTYQDFKLMMR 1480
+T+Q+F
Sbjct: 75 DGAITFQEFARGFL 88
Score = 44.3 bits (105), Expect = 2e-05
Identities = 9/50 (18%), Positives = 20/50 (40%), Gaps = 7/50 (14%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+LR +F CD +R+G +++ E + L + + +
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRALCTEL-------RVRPADAEAVFQ 68
Score = 43.5 bits (103), Expect = 3e-05
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 53 SLSRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
L R EF + L ++ +F +D D DG I+FQEF
Sbjct: 43 RLEREEFRALCTELRVRPADA--EAVFQRLDADRDGAITFQEFAR 85
Score = 43.5 bits (103), Expect = 3e-05
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 1196 SLSRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
L R EF + L ++ +F +D D DG I+FQEF
Sbjct: 43 RLEREEFRALCTELRVRPADA--EAVFQRLDADRDGAITFQEFAR 85
Score = 43.5 bits (103), Expect = 3e-05
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 5/45 (11%)
Query: 1355 SLSRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
L R EF + L ++ +F +D D DG I+FQEF
Sbjct: 43 RLEREEFRALCTELRVRPADA--EAVFQRLDADRDGAITFQEFAR 85
Score = 39.6 bits (93), Expect = 7e-04
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+LR +F CD +R+G +++ E + L
Sbjct: 26 LARLRSVFAACDANRSGRLEREEFRALCTEL 56
>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion,
structural genomics, PSI, protein structur initiative,
structural genomics of pathogenic protozoa CONS SGPP;
1.70A {Plasmodium falciparum} PDB: 2auc_A
Length = 146
Score = 58.4 bits (142), Expect = 6e-10
Identities = 18/133 (13%), Positives = 55/133 (41%), Gaps = 27/133 (20%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1408
R LG+ ++ + + + ++++++L+ + + +
Sbjct: 39 YNAR----------KLGLAPSSIDEKKI----KELYGDNLTYEQYLEYLSICVHDKDNVE 84
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKD 1468
+L +F DN+ G + K ++ +L + + +LTD + + ++ S+D
Sbjct: 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGD-----ALTDQEAIDALN------AFSSED 133
Query: 1469 FLTYQDF-KLMMR 1480
+ Y+ F + +++
Sbjct: 134 NIDYKLFCEDILQ 146
Score = 52.6 bits (127), Expect = 8e-08
Identities = 14/109 (12%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 1249
R LG+ ++ + + + ++++++L+ + + +
Sbjct: 39 YNAR----------KLGLAPSSIDEKKI----KELYGDNLTYEQYLEYLSICVHDKDNVE 84
Query: 1250 KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDG 1298
+L +F DN+ G + K ++ +L + + +LTD + + ++
Sbjct: 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTWGD-----ALTDQEAIDALNA 128
Score = 46.1 bits (110), Expect = 1e-05
Identities = 11/89 (12%), Positives = 35/89 (39%), Gaps = 15/89 (16%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TED 106
R LG+ ++ + + + ++++++L+ + + +
Sbjct: 39 YNAR----------KLGLAPSSIDEKKI----KELYGDNLTYEQYLEYLSICVHDKDNVE 84
Query: 107 KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+L +F DN+ G + K ++ +L +
Sbjct: 85 ELIKMFAHFDNNCTGYLTKSQMKNILTTW 113
Score = 42.2 bits (100), Expect = 3e-04
Identities = 14/164 (8%), Positives = 45/164 (27%), Gaps = 39/164 (23%)
Query: 1247 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI---DGM- 1299
E+K + + G I + R L + + ++
Sbjct: 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGL-----APSSIDEKKIKELYGDNL 64
Query: 1300 -FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSR 1358
++ E + ++ ++ + +A ++ TG + ++
Sbjct: 65 TYEQYLEYLSICVHDKDNVEE-----LIKMFAHF----------DNNCTGYL------TK 103
Query: 1359 AEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV 1399
++ + G N + I ++ F + ++
Sbjct: 104 SQMKNILTTWGDALTDQEAIDALN--AFSSEDNIDYKLFCEDIL 145
Score = 38.0 bits (89), Expect = 0.007
Identities = 10/77 (12%), Positives = 22/77 (28%), Gaps = 16/77 (20%)
Query: 1406 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDA 1462
E+K + + G I + R L + + ++ +
Sbjct: 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGL-----APSSIDEKKIKE------ 58
Query: 1463 GLDSKDFLTYQDFKLMM 1479
D LTY+ + +
Sbjct: 59 --LYGDNLTYEQYLEYL 73
Score = 36.0 bits (84), Expect = 0.039
Identities = 6/35 (17%), Positives = 10/35 (28%), Gaps = 3/35 (8%)
Query: 104 TEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
E+K + + G I + R L
Sbjct: 10 LEEKVDESDVRIYFNEKSSGGKISIDNASYNARKL 44
>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER,
golgi, transport, disulfide bond, endopla reticulum,
ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A
3lcp_C
Length = 143
Score = 58.1 bits (140), Expect = 1e-09
Identities = 17/95 (17%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Query: 1391 FQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS--- 1445
E L+ V+ ++ F M D D N ++D EL+ + + + +
Sbjct: 49 IMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108
Query: 1446 LTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
+++ ++ +IDG+ +D ++ ++ Y +F ++
Sbjct: 109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ 143
Score = 45.7 bits (108), Expect = 2e-05
Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 1232 FQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTS--- 1286
E L+ V+ ++ F M D D N ++D EL+ + + + +
Sbjct: 49 IMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL 108
Query: 1287 LTDSQVTELIDGMFQ 1301
+++ ++ +IDG+ +
Sbjct: 109 MSEDELINIIDGVLR 123
Score = 38.4 bits (89), Expect = 0.005
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRI----IFDMCDNDRNGV 122
F + D DG+ + E + + +ED+L + D + +G
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 123 IDKGELAEMLR 133
ID E A+ L+
Sbjct: 133 IDYAEFAKSLQ 143
Score = 38.4 bits (89), Expect = 0.005
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRI----IFDMCDNDRNGV 1265
F + D DG+ + E + + +ED+L + D + +G
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 1266 IDKGELAEMLR 1276
ID E A+ L+
Sbjct: 133 IDYAEFAKSLQ 143
Score = 38.4 bits (89), Expect = 0.005
Identities = 15/71 (21%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGH--------TEDKLRI----IFDMCDNDRNGV 1424
F + D DG+ + E + + +ED+L + D + +G
Sbjct: 73 YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132
Query: 1425 IDKGELAEMLR 1435
ID E A+ L+
Sbjct: 133 IDYAEFAKSLQ 143
Score = 36.1 bits (83), Expect = 0.030
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Query: 89 FQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMAR 140
E L+ V+ ++ F M D D N ++D EL+ + + +
Sbjct: 49 IMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEG 102
Score = 33.8 bits (77), Expect = 0.23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 72 VRMMFNIVDKDGDGRISFQEFL 93
+ + DK+ DG I + EF
Sbjct: 118 IDGVLRDDDKNNDGYIDYAEFA 139
Score = 33.8 bits (77), Expect = 0.23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFL 1236
+ + DK+ DG I + EF
Sbjct: 118 IDGVLRDDDKNNDGYIDYAEFA 139
Score = 33.8 bits (77), Expect = 0.23
Identities = 7/22 (31%), Positives = 11/22 (50%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFL 1395
+ + DK+ DG I + EF
Sbjct: 118 IDGVLRDDDKNNDGYIDYAEFA 139
>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+)
requirement, hydrolase chimera; 2.80A {Rattus norvegicus}
SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3
Length = 900
Score = 62.5 bits (151), Expect = 1e-09
Identities = 49/268 (18%), Positives = 91/268 (33%), Gaps = 60/268 (22%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGEL--- 1271
R M N++D+DG+G++ EF L++R IF D D++G + E+
Sbjct: 579 CRSMVNLMDRDGNGKLGLVEFNI---LWNRIR---NYLTIFRKFDLDKSGSMSAYEMRMA 632
Query: 1272 ---------AEMLRSLVE-----------------MARTTSLTDS--QVTELIDGMFQSP 1303
++ + +V + R L Q+ G Q
Sbjct: 633 IEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLD 692
Query: 1304 RELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEK--------RRRDDETGEV---VM 1352
L+ + + H + E+ + + EV +
Sbjct: 693 LISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATEL 752
Query: 1353 RTSLSRAEFASALGMKSDAVF----VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTED 1408
L++ +K+D F R M ++D D G++ F+EF L++
Sbjct: 753 MNILNKV-VTRHPDLKTDG-FGIDTCRSMVAVMDSDTTGKLGFEEFKY---LWNNIK--- 804
Query: 1409 KLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
K + I+ + DR+G I EL +
Sbjct: 805 KWQGIYKRFETDRSGTIGSNELPGAFEA 832
Score = 45.5 bits (107), Expect = 2e-04
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R M ++D D G++ F+EF L++ K + I+ + DR+G I EL
Sbjct: 776 CRSMVAVMDSDTTGKLGFEEFKY---LWNNIK---KWQGIYKRFETDRSGTIGSNELPGA 829
Query: 132 LRS 134
+
Sbjct: 830 FEA 832
Score = 44.4 bits (104), Expect = 4e-04
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R M N++D+DG+G++ EF L++R IF D D++G + E+
Sbjct: 579 CRSMVNLMDRDGNGKLGLVEFNI---LWNRIR---NYLTIFRKFDLDKSGSMSAYEMRMA 632
Query: 132 LRSL 135
+ +
Sbjct: 633 IEAA 636
Score = 44.4 bits (104), Expect = 4e-04
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R M N++D+DG+G++ EF L++R IF D D++G + E+
Sbjct: 579 CRSMVNLMDRDGNGKLGLVEFNI---LWNRIR---NYLTIFRKFDLDKSGSMSAYEMRMA 632
Query: 1434 LRSL 1437
+ +
Sbjct: 633 IEAA 636
>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal
binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB:
1k95_A 1f4q_A 1f4o_A
Length = 165
Score = 58.1 bits (141), Expect = 1e-09
Identities = 16/106 (15%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R+M ++D+D G++ F F + L++ + + F D D +G ++ EL +
Sbjct: 42 CRIMIAMLDRDHTGKMGFNAFKE---LWAA---LNAWKENFMTVDQDGSGTVEHHELRQA 95
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+ + L+ + + + + + + + + D+
Sbjct: 96 IGLMGY-----RLSP----QTLTTIVKRYSKNGR--IFFDDYVACC 130
Score = 56.2 bits (136), Expect = 6e-09
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R+M ++D+D G++ F F + L++ + + F D D +G ++ EL +
Sbjct: 42 CRIMIAMLDRDHTGKMGFNAFKE---LWAA---LNAWKENFMTVDQDGSGTVEHHELRQA 95
Query: 132 LRSL 135
+ +
Sbjct: 96 IGLM 99
Score = 56.2 bits (136), Expect = 6e-09
Identities = 14/64 (21%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
R+M ++D+D G++ F F + L++ + + F D D +G ++ EL +
Sbjct: 42 CRIMIAMLDRDHTGKMGFNAFKE---LWAA---LNAWKENFMTVDQDGSGTVEHHELRQA 95
Query: 1275 LRSL 1278
+ +
Sbjct: 96 IGLM 99
Score = 36.6 bits (85), Expect = 0.032
Identities = 27/188 (14%), Positives = 51/188 (27%), Gaps = 51/188 (27%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM---------FQ 1301
+ F ++G +D EL L + + +I + F
Sbjct: 2 VYTYFSA-VAGQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60
Query: 1302 SPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAE 1360
+ +EL + F D D +G ++ E
Sbjct: 61 AFKELW--------AALNAWKENFMTV---------------DQDGSG------TVEHHE 91
Query: 1361 FASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1417
A+ G + + + K+G RI F +++ V L F
Sbjct: 92 LRQAIGLMGYRLSPQTLTTIVKRYSKNG--RIFFDDYVACCV------KLRALTDFFRKR 143
Query: 1418 DNDRNGVI 1425
D+ + G
Sbjct: 144 DHLQQGSA 151
Score = 32.0 bits (73), Expect = 0.94
Identities = 33/199 (16%), Positives = 54/199 (27%), Gaps = 51/199 (25%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-------TEDKLRIIFDMCDNDRNGVID 1267
V F+ V DG + +E L L G + + RI+ M D D G +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEE-LQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMG 58
Query: 1268 KGELAEMLRSLVEMARTTSLTDSQVTELIDGM-FQSPRELMLAKAETRER-RQKKLEHFF 1325
E+ +L D DG EL A R + L
Sbjct: 59 FNAFKELWAALNAWKENFMTVDQ------DGSGTVEHHELRQAIGLMGYRLSPQTLTTIV 112
Query: 1326 REAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMM---FNIVD 1382
+ + G + ++ + V +R + F D
Sbjct: 113 KRY----------------SKNGRI------FFDDYVACC------VKLRALTDFFRKRD 144
Query: 1383 KDGDGRI--SFQEFLDTVV 1399
G + +FL +
Sbjct: 145 HLQQGSANFIYDDFLQGTM 163
Score = 31.6 bits (72), Expect = 1.3
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 121
+G + + + K+G RI F +++ V L F D+ + G
Sbjct: 98 LMGYRLSPQTLTTIVKRYSKNG--RIFFDDYVACCV------KLRALTDFFRKRDHLQQG 149
Query: 122 VI 123
Sbjct: 150 SA 151
Score = 31.6 bits (72), Expect = 1.3
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1264
+G + + + K+G RI F +++ V L F D+ + G
Sbjct: 98 LMGYRLSPQTLTTIVKRYSKNG--RIFFDDYVACCV------KLRALTDFFRKRDHLQQG 149
Query: 1265 VI 1266
Sbjct: 150 SA 151
Score = 31.2 bits (71), Expect = 2.1
Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 21/125 (16%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-------TEDKLRIIFDMCDNDRNGVID 1426
V F+ V DG + +E L L G + + RI+ M D D G +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEE-LQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMG 58
Query: 1427 KGELAEMLRSLVEMARTTSLTDS------QVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
E+ +L D + EL + G L+ Q +++
Sbjct: 59 FNAFKELWAALNAWKENFMTVDQDGSGTVEHHELRQAI-GLMGYR----LSPQTLTTIVK 113
Query: 1481 DYKGD 1485
Y +
Sbjct: 114 RYSKN 118
Score = 30.8 bits (70), Expect = 2.5
Identities = 17/74 (22%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-------TEDKLRIIFDMCDNDRNGVID 124
V F+ V DG + +E L L G + + RI+ M D D G +
Sbjct: 2 VYTYFSAV-AGQDGEVDAEE-LQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMG 58
Query: 125 KGELAEMLRSLVEM 138
E+ +L
Sbjct: 59 FNAFKELWAALNAW 72
Score = 29.3 bits (66), Expect = 7.6
Identities = 14/69 (20%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ F VD+DG G + E + L + L I +NG I +
Sbjct: 73 KENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVK--RYSKNGRIFFDDYVACC 130
Query: 133 RSLVEMART 141
L +
Sbjct: 131 VKLRALTDF 139
>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal
transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB:
2jc2_A
Length = 198
Score = 58.6 bits (142), Expect = 2e-09
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 17/106 (16%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R+M +++D+D G + F EF + L++ + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKE---LWAV---LNGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
L ++ L+ + ++ + + + K +T+ D+
Sbjct: 129 LTTMGF-----RLSP----QAVNSIAKRYSTNGK--ITFDDYIACC 163
Score = 55.9 bits (135), Expect = 1e-08
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
R+M +++D+D G + F EF + L++ + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKE---LWAV---LNGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 1275 LRSLVEMARTTSLTDSQVTELID 1297
L ++ L+ V +
Sbjct: 129 LTTMGF-----RLSPQAVNSIAK 146
Score = 55.9 bits (135), Expect = 1e-08
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R+M +++D+D G + F EF + L++ + R F D DR+G +D EL +
Sbjct: 75 CRLMVSMLDRDMSGTMGFNEFKE---LWAV---LNGWRQHFISFDTDRSGTVDPQELQKA 128
Query: 132 LRSL 135
L ++
Sbjct: 129 LTTM 132
Score = 41.3 bits (97), Expect = 0.001
Identities = 30/188 (15%), Positives = 51/188 (27%), Gaps = 43/188 (22%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGM------- 1299
T+D L F ++G ID EL L ++ +
Sbjct: 31 TQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGT 89
Query: 1300 --FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLS 1357
F +EL F D +G V L
Sbjct: 90 MGFNEFKELW--------AVLNGWRQHFISF--------------DTDRSG-TVDPQELQ 126
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMC 1417
+A + +G + V + +G +I+F +++ V L F
Sbjct: 127 KA--LTTMGFRLSPQAVNSIAKRYSTNG--KITFDDYIACCV------KLRALTDSFRRR 176
Query: 1418 DNDRNGVI 1425
D + GV+
Sbjct: 177 DTAQQGVV 184
Score = 34.4 bits (79), Expect = 0.21
Identities = 29/196 (14%), Positives = 56/196 (28%), Gaps = 45/196 (22%)
Query: 1214 FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHT--EDKLRIIFDMCDNDRNGVIDK 1268
+ F DG+I E L + + R++ M D D +G +
Sbjct: 34 PLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGF 92
Query: 1269 GELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRER-RQKKLEHFFRE 1327
E E+ L + D+ G +EL A R + + +
Sbjct: 93 NEFKELWAVLNGWRQHFISFDTDR----SGTVDP-QELQKALTTMGFRLSPQAVNSIAKR 147
Query: 1328 AYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMM---FNIVDKD 1384
G++ + ++ + V +R + F D
Sbjct: 148 Y----------------STNGKI------TFDDYIACC------VKLRALTDSFRRRDTA 179
Query: 1385 GDGRISF--QEFLDTV 1398
G ++F +F+ V
Sbjct: 180 QQGVVNFPYDDFIQCV 195
Score = 34.0 bits (78), Expect = 0.29
Identities = 13/75 (17%), Positives = 24/75 (32%), Gaps = 5/75 (6%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
T+D L F ++G ID EL L ++ + D +
Sbjct: 31 TQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML--DRDMS 87
Query: 1466 SKDFLTYQDFKLMMR 1480
+ + +FK +
Sbjct: 88 GT--MGFNEFKELWA 100
Score = 32.4 bits (74), Expect = 0.95
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 8/63 (12%)
Query: 61 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRN 120
+ +G + V + +G +I+F +++ V L F D +
Sbjct: 130 TTMGFRLSPQAVNSIAKRYSTNG--KITFDDYIACCV------KLRALTDSFRRRDTAQQ 181
Query: 121 GVI 123
GV+
Sbjct: 182 GVV 184
Score = 32.4 bits (74), Expect = 0.95
Identities = 11/63 (17%), Positives = 23/63 (36%), Gaps = 8/63 (12%)
Query: 1204 SALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRN 1263
+ +G + V + +G +I+F +++ V L F D +
Sbjct: 130 TTMGFRLSPQAVNSIAKRYSTNG--KITFDDYIACCV------KLRALTDSFRRRDTAQQ 181
Query: 1264 GVI 1266
GV+
Sbjct: 182 GVV 184
Score = 32.0 bits (73), Expect = 1.2
Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Query: 71 FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHT--EDKLRIIFDMCDNDRNGVIDK 125
+ F DG+I E L + + R++ M D D +G +
Sbjct: 34 PLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGF 92
Query: 126 GELAEMLRSLVEMARTSF 143
E E+ L R F
Sbjct: 93 NEFKELWAVLNGW-RQHF 109
Score = 32.0 bits (73), Expect = 1.2
Identities = 14/73 (19%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Query: 1373 FVRMMFNIVDKDGDGRISFQE---FLDTVVLFSRGHT--EDKLRIIFDMCDNDRNGVIDK 1427
+ F DG+I E L + + R++ M D D +G +
Sbjct: 34 PLYGYFA-AVAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGF 92
Query: 1428 GELAEMLRSLVEM 1440
E E+ L
Sbjct: 93 NEFKELWAVLNGW 105
>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural
genomics, seattle S genomics center for infectious
disease, ssgcid; 1.90A {Entamoeba histolytica} PDB:
3sia_A 3sib_A
Length = 220
Score = 58.3 bits (141), Expect = 3e-09
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
M I D D +G ISF EF + ++ + +F M R+G ++ E+
Sbjct: 89 ALRMMRIFDTDFNGHISFYEF---MAMYKF---MELAYNLFVMNARARSGTLEPHEILPA 142
Query: 132 LRSL 135
L+ L
Sbjct: 143 LQQL 146
Score = 58.3 bits (141), Expect = 3e-09
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
M I D D +G ISF EF + ++ + +F M R+G ++ E+
Sbjct: 89 ALRMMRIFDTDFNGHISFYEF---MAMYKF---MELAYNLFVMNARARSGTLEPHEILPA 142
Query: 1275 LRSL 1278
L+ L
Sbjct: 143 LQQL 146
Score = 58.3 bits (141), Expect = 3e-09
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 6/64 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
M I D D +G ISF EF + ++ + +F M R+G ++ E+
Sbjct: 89 ALRMMRIFDTDFNGHISFYEF---MAMYKF---MELAYNLFVMNARARSGTLEPHEILPA 142
Query: 1434 LRSL 1437
L+ L
Sbjct: 143 LQQL 146
Score = 48.2 bits (115), Expect = 8e-06
Identities = 13/67 (19%), Positives = 22/67 (32%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ F VD+D G + E + + + + D D NG I E M
Sbjct: 53 IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
Query: 132 LRSLVEM 138
+ +
Sbjct: 113 YKFMELA 119
Score = 48.2 bits (115), Expect = 8e-06
Identities = 13/67 (19%), Positives = 22/67 (32%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ F VD+D G + E + + + + D D NG I E M
Sbjct: 53 IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
Query: 1275 LRSLVEM 1281
+ +
Sbjct: 113 YKFMELA 119
Score = 48.2 bits (115), Expect = 8e-06
Identities = 13/67 (19%), Positives = 22/67 (32%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ F VD+D G + E + + + + D D NG I E M
Sbjct: 53 IYQWFMGVDRDRSGTLEINELMMGQFPGGIRLSPQTALRMMRIFDTDFNGHISFYEFMAM 112
Query: 1434 LRSLVEM 1440
+ +
Sbjct: 113 YKFMELA 119
Score = 47.5 bits (113), Expect = 1e-05
Identities = 22/182 (12%), Positives = 46/182 (25%), Gaps = 31/182 (17%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELM 1307
++ F D DR+G ++ EL L+ ++ +F +
Sbjct: 50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPG-----GIRLSPQTALRMMR-IFDTDFNGH 103
Query: 1308 LAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRTSLSRAEFASAL- 1365
++ E + + F E F +G +L E AL
Sbjct: 104 ISFYEF-----MAM-YKFMELAYNLF-------VMNARARSG------TLEPHEILPALQ 144
Query: 1366 --GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG 1423
G + ++ + G ++ F+ I +
Sbjct: 145 QLGFYINQRTSLLLHR-LFARGMAFCDLNCWIAICA-FAAQTRSAYQMIFMNPYYGPMKP 202
Query: 1424 VI 1425
Sbjct: 203 FN 204
Score = 37.5 bits (87), Expect = 0.026
Identities = 8/74 (10%), Positives = 17/74 (22%), Gaps = 5/74 (6%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
+L E AL G + ++ + G ++ F+
Sbjct: 133 TLEPHEILPALQQLGFYINQRTSLLLHR-LFARGMAFCDLNCWIAICA-FAAQTRSAYQM 190
Query: 110 IIFDMCDNDRNGVI 123
I +
Sbjct: 191 IFMNPYYGPMKPFN 204
Score = 37.5 bits (87), Expect = 0.026
Identities = 8/74 (10%), Positives = 17/74 (22%), Gaps = 5/74 (6%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
+L E AL G + ++ + G ++ F+
Sbjct: 133 TLEPHEILPALQQLGFYINQRTSLLLHR-LFARGMAFCDLNCWIAICA-FAAQTRSAYQM 190
Query: 1253 IIFDMCDNDRNGVI 1266
I +
Sbjct: 191 IFMNPYYGPMKPFN 204
Score = 37.1 bits (86), Expect = 0.030
Identities = 12/75 (16%), Positives = 27/75 (36%), Gaps = 9/75 (12%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
++ F D DR+G ++ EL L+ ++ +F D +
Sbjct: 50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPG-----GIRLSPQTALRMMR-IF-DTDFNG 102
Query: 1467 KDFLTYQDFKLMMRD 1481
+++ +F M +
Sbjct: 103 H--ISFYEFMAMYKF 115
Score = 32.4 bits (74), Expect = 1.00
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++ F D DR+G ++ EL
Sbjct: 50 YTRIYQWFMGVDRDRSGTLEINELMMGQFPG 80
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 60.4 bits (146), Expect = 6e-09
Identities = 70/386 (18%), Positives = 116/386 (30%), Gaps = 115/386 (29%)
Query: 1683 AHSLYVFLFALMLIHGLARITG--PPRFWIY-------FIGPGVVFILDKVVSLRTKYMA 1733
A+S L L HG P + F K++ T+ A
Sbjct: 3 AYSTR----PLTLSHGSLEHVLLVPTASFFIASQLQEQFN---------KILPEPTEGFA 49
Query: 1734 LDILETELLPSDVIKI--RF------YRPPNFTYHSGQWVRLACTAFKNAAY------HS 1779
D E P+ ++ +F P+ Q + L T F+N Y H+
Sbjct: 50 AD---DE--PTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFENC-YLEGNDIHA 103
Query: 1780 FTLTSAPHENFLSCHIKAQGPWTWKLRNYFDPCN--------------FNASEDQPKIRL 1825
+ + +K + ++NY F A + +L
Sbjct: 104 LAAKLLQEND--TTLVKTKEL----IKNYITARIMAKRPFDKKSNSALFRAVGEG-NAQL 156
Query: 1826 EGPFGG-GNQDWYKF-EVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLWI 1883
FGG GN D Y F E+ + Y ++ DL+ S S + +
Sbjct: 157 VAIFGGQGNTDDY-FEELRDLY------QTYHVLVGDLIK-FSAETLSELIRTTL----- 203
Query: 1884 CPSHKHFEWFIDV---LRDVEKK-DVTNVLEIH-----IFITQFFHKFDLRTTMLYI--C 1932
+ K F +++ L + D +L I I + Q H Y+
Sbjct: 204 -DAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAH---------YVVTA 253
Query: 1933 ENHFQRLSKSSMFTGLKAVNHFGR-----------PDMSSFLKFVQKKHSYVSKIGVFS- 1980
+ + + + LK + SF V+K + + IGV
Sbjct: 254 KLL--GFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCY 311
Query: 1981 -CGPRP-LTKSIMSACEEVNKGRKLP 2004
P L SI+ E N+G P
Sbjct: 312 EAYPNTSLPPSILEDSLENNEGVPSP 337
Score = 60.1 bits (145), Expect = 8e-09
Identities = 108/753 (14%), Positives = 217/753 (28%), Gaps = 292/753 (38%)
Query: 687 HPGISHVFQTAAFRFGHSLIPPGIY-----RRDEKCNFKPTVKGDPAIRLCSNWWDSTNV 741
H + HV L+P + +++ F + +P ++ D
Sbjct: 13 HGSLEHVL----------LVPTASFFIASQLQEQ---FNKIL-PEPTEGFAAD--D---- 52
Query: 742 DPAIRLCSNWWDSTNVMTYSTLEEIL---MGMASQLSEKEDAVLCSDIRDKLFGPNEFSR 798
+P +T E++ +G S L E + + EF
Sbjct: 53 EP-----------------TTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCL--TEFEN 93
Query: 799 RDLGALNIMRGRD--------------NGIADYNTVRSNYNLKKLKSWNDLEAVNPALFK 844
+ G D + +++ + + + N ALF+
Sbjct: 94 ------CYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFR 147
Query: 845 EAHGKEILKRLKRSY------GNSLDNIDLYIGGMLESHEGPGPLFTNII------LEQF 892
+ GN+ D Y + + ++ L ++I L +
Sbjct: 148 AVGEGNA-----QLVAIFGGQGNTDD----YFEELRDLYQTYHVLVGDLIKFSAETLSEL 198
Query: 893 TRLRDADRFWFENTENGMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDPC 952
R F G + ++ W +P
Sbjct: 199 IRTTLDAEKVFTQ-----------------------------GLNILE-----W-LENPS 223
Query: 953 PQPAQ---LNASMMMPCSYLKGFDYFEGSELA-YIYACLFLMVVP-----FICGAAGY-- 1001
P + L+ + P + +LA Y+ L P ++ GA G+
Sbjct: 224 NTPDKDYLLSIPISCPLIGV--------IQLAHYVVTAKLLGFTPGELRSYLKGATGHSQ 275
Query: 1002 GVIKLQDRKRRALKMKQEELKNGPSKANLAVGTVDKMAVREW--LHANHKRFVKI--RLG 1057
G++ +A+ D W + ++ + + +G
Sbjct: 276 GLV-----------------------TAVAIAETD-----SWESFFVSVRKAITVLFFIG 307
Query: 1058 PETCLHTVDRKGEKLRTVNFKNCDTVTIEESQPERGKKKHPMVLIRVHRDHDLVLEFDSL 1117
C + D++ E P PM+ I +L +
Sbjct: 308 VR-CYEAYPNTSLPPSILE----DSLENNEGVP------SPMLSIS-----NL-----TQ 346
Query: 1118 AARKKFMNKMEGFLNAMKK-HLIIVQSPRELMLA-KAETRERRQKKLEHF---FREAYAL 1172
+ ++NK L A K+ + +V + L+++ ++ L R+A A
Sbjct: 347 EQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQS-------LYGLNLTLRKAKAP 399
Query: 1173 TFGLK----PGEKRRRDDETGEVVMR---TSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1225
+ GL P +R+ + R + + F S L + A ++++KD
Sbjct: 400 S-GLDQSRIPFSERKL-----KFSNRFLPVA---SPFHSHL-LV-PAS------DLINKD 442
Query: 1226 -GDGRISFQEFLDTVVLFSRGHTEDKLRI-IFDMCDNDRNGVIDKGELAEMLRSLVEMAR 1283
+SF + +D ++I ++D D D LR L
Sbjct: 443 LVKNNVSF-------------NAKD-IQIPVYDTFDGS-----D-------LRVL----- 471
Query: 1284 TTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEK--- 1340
+ S+++ ++D + + P + F+ + L FG PG
Sbjct: 472 SGSISER----IVDCIIRLPVKWETT-------------TQFKATHILDFG--PGGASGL 512
Query: 1341 ----RRRDDETG-EVVMRTSLSRAEFASALGMK 1368
R D TG V++ +L G K
Sbjct: 513 GVLTHRNKDGTGVRVIVAGTLDINP-DDDYGFK 544
Score = 58.1 bits (140), Expect = 4e-08
Identities = 71/509 (13%), Positives = 135/509 (26%), Gaps = 184/509 (36%)
Query: 1358 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--GHTEDKLRIIFD 1415
+ +F L ++ D E L + G+ +
Sbjct: 34 QEQFNKILPEPTEGF-----------AAD-----DEPTTPAELVGKFLGYVSSLV----- 72
Query: 1416 MCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF 1475
+ + G+ ++L + L + + L A L ++ T
Sbjct: 73 ----EPS---KVGQFDQVLNLCLTEFENCYLEGNDIHALA------AKLLQENDTTLVKT 119
Query: 1476 KLMMRDYKGDFVAIGLDCKGAKQN-----FLDTSTNVAR-MTSF----NIEPILDEDKSW 1525
K ++++Y A + + + F A+ + F N + +E
Sbjct: 120 KELIKNY---ITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEE---- 172
Query: 1526 FQLKLVPITTFLEENRQNIFYLFIFYVITIALFVERFIHYS------FLAEHTDLRHIMG 1579
L + L+ Y + V I +S + D +
Sbjct: 173 -----------LRD-------LYQTY----HVLVGDLIKFSAETLSELIRTTLDAEKVFT 210
Query: 1580 QYIPLDSHIQFHKIAA------CTALF-FSLIHTVGHIINFYHVSTQPLEHLHCLTAEVH 1632
Q + + ++ + + LI Q L H + +TA++
Sbjct: 211 QGLNILEWLE-NPSNTPDKDYLLSIPISCPLI-----------GVIQ-LAH-YVVTAKLL 256
Query: 1633 FPSDYKPGITFWLFQTITGITGVLLFVIMVLIFVFAHPT-------IRKKAYNW-FWL-A 1683
+ PG L + G TG ++ + A +KA F++
Sbjct: 257 ---GFTPGE---LRSYLKGATGHSQGLVTAV--AIAETDSWESFFVSVRKAITVLFFIGV 308
Query: 1684 HSLYVF-LFAL------------------ML-IHGLAR------IT-----GPPRFWIY- 1711
+ +L ML I L + + P +
Sbjct: 309 RCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEI 368
Query: 1712 --FIGPGVVFILDKVV------SLRTKYMALDI-LETELLPS--DVIKIRFY-RPPNFTY 1759
G +V SL L++ L PS D +I F R F+
Sbjct: 369 SLVNGA------KNLVVSGPPQSLY----GLNLTLRKAKAPSGLDQSRIPFSERKLKFS- 417
Query: 1760 HSGQWVR-LACTAFKNAAYHSFTLTSAPH 1787
R L + +HS L A
Sbjct: 418 -----NRFLPVA----SPFHSHLLVPASD 437
Score = 52.4 bits (125), Expect = 2e-06
Identities = 51/310 (16%), Positives = 90/310 (29%), Gaps = 96/310 (30%)
Query: 834 DLEAVNPA---LFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESHEGPGPLFTNIILE 890
DL + A ++ A K +YG S+ +I + P L + E
Sbjct: 1634 DLYKTSKAAQDVWNRAD-----NHFKDTYGFSILDIVI---------NNPVNLTIHFGGE 1679
Query: 891 QFTRLRDA-DRFWFENTENGMFTAAEV-----EAIRKITLW--DIIVNATDIGADAIQKN 942
+ R+R+ FE +G ++ E T +++AT
Sbjct: 1680 KGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQ--------- 1730
Query: 943 VFFWNATDPCPQPAQLNASMMMPCSYLK--GF----DYFEG-S--ELAYIYACLFLMVVP 993
QPA LK G F G S E YA L
Sbjct: 1731 ----FT-----QPALTLMEKAA-FEDLKSKGLIPADATFAGHSLGE----YAAL------ 1770
Query: 994 FICGAAGYGVIKLQD-----RKR-RALKMKQEELKNGPSKANLAVGTVDKMAVREWLHAN 1047
A+ V+ ++ R +++ + G S N + ++ V
Sbjct: 1771 ----ASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRS--NYGMIAINPGRVAASFSQE 1824
Query: 1048 HKRFVKIRLGPET----------C----------LHTVDRKGEKLRTVNFKNCDTVTIEE 1087
++V R+G T L +D L + + D + +++
Sbjct: 1825 ALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDIIELQK 1884
Query: 1088 S-QPERGKKK 1096
S E +
Sbjct: 1885 SLSLEEVEGH 1894
Score = 49.3 bits (117), Expect = 2e-05
Identities = 97/696 (13%), Positives = 185/696 (26%), Gaps = 253/696 (36%)
Query: 56 RAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSR--GHTEDKLRIIFD 113
+ +F L ++ D E L + G+ +
Sbjct: 34 QEQFNKILPEPTEGF-----------AAD-----DEPTTPAELVGKFLGYVSSLV----- 72
Query: 114 MCDNDRNGVIDKGELAEMLRSLVEMARTSFPSGGAATTVVKIVLRGYYSYGNSLDNIDLY 173
+ + G+ ++L + + L G ++I
Sbjct: 73 ----EPS---KVGQFDQVLNLCLTEFENCY-------------LEG--------NDIHAL 104
Query: 174 IGGMLESHEGPGPLFTNIILEQFTRLRDADRFWFENTENGMFTAAEVEAIRKIT------ 227
+L+ ++ +I T A R + + + + +F A + +
Sbjct: 105 AAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQG 164
Query: 228 -----------LW--------DIIVNATD----IGADAIQKNVFF--------WNATDPC 256
L+ D+I + + + + F W +P
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEW-LENPS 223
Query: 257 PQPAQLNASMMMPCSYLKGFDYFEPVSLVFQG-SELA-YIYACLFLMVVP-----FICGA 309
P YL P+S G +LA Y+ L P ++ GA
Sbjct: 224 NTP---------DKDYLLSI----PISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGA 270
Query: 310 AGY--GVIKLQDRKRRALKMKQEELKNGPSKANLAVGTVDKMAVREW--LHANHKRFVKI 365
G+ G++ +A+ D W + ++ + +
Sbjct: 271 TGHSQGLV-----------------------TAVAIAETD-----SWESFFVSVRKAITV 302
Query: 366 --RLGPETCLHTVDRKGEKLRTVNFKNCDTVTIEESQFSTNREFQHQAKTS--IEDFYGD 421
+G +R + + + +ED +
Sbjct: 303 LFFIG--------------VR--------------CY----EAYPNTSLPPSILEDSLEN 330
Query: 422 GQVVSSEIVMASESGCPIEMHEIEIEKCDEMYDKDCEGGKYIPFHRAGYDRSTGTS-PNS 480
+ V S M S S E + + K + ++P + S N
Sbjct: 331 NEGVPSP--MLSISNLTQEQVQDYVNKTN----------SHLPAGKQVE-----ISLVNG 373
Query: 481 PRQQINRVSSWIDGSFIYSTSEAWLN-AMRSFTNGSLATDASGKMPVKNTMRVPLFNN-- 537
+ + VS G S LN +R S D S ++P + R F+N
Sbjct: 374 AKNLV--VS----G---PPQSLYGLNLTLRKAKAPS-GLDQS-RIP--FSERKLKFSNRF 420
Query: 538 -PV--P-HSLRTLSPERLYLLGDARSNQNPALLAFSILFFRWHNVIAAQIEDKHPELSDE 593
PV P H S LL A N L+ ++ F N QI D
Sbjct: 421 LPVASPFH-----SH----LLVPASDLINKDLVKNNVSF----NAKDIQIPVYDTF--DG 465
Query: 594 EIFQKTRRLVVASLQNVIAYEYI--PAFLGRSLSPYRGYKMDVHPG----ISHVFQTAAF 647
+ + + + I + + + +D PG + +
Sbjct: 466 SDLRVLSGSISERIVDCIIRLPVKWETTTQFKAT----HILDFGPGGASGLGVLTHRNKD 521
Query: 648 RFGHSLIPPGIYRRDEKCNFKPTVKGDPAPPYRGYK 683
G +I G T+ +P Y G+K
Sbjct: 522 GTGVRVIVAG------------TLDINPDDDY-GFK 544
Score = 48.9 bits (116), Expect = 2e-05
Identities = 60/421 (14%), Positives = 111/421 (26%), Gaps = 177/421 (42%)
Query: 768 MGMASQLSEKEDAVLCSDIRDKLFGPNEFSRRDLG--ALNIMRGRDNGIADYNT------ 819
MGM L + A D+ ++ + + G L+I+ + +
Sbjct: 1631 MGM--DLYKTSKAA--QDVWNRA---DNHFKDTYGFSILDIVINNPVNLTIHFGGEKGKR 1683
Query: 820 VRSNYNLKKLKSWNDLEAVNPALFKEAHGKEILKRLKRSYGNSLDNIDLYIGGMLESHEG 879
+R NY+ ++ D + +FKE + ++ Y
Sbjct: 1684 IRENYSAMIFETIVDGKLKTEKIFKEIN----------------EHSTSYT------FRS 1721
Query: 880 P-GPLF-TNIILEQFTRLRDADRFWFENTENGMFTA--AEVEAIRKITLWDIIVNATDIG 935
G L T + T+ + A E ++ +I
Sbjct: 1722 EKGLLSAT------------------QFTQPALTLMEKAAFEDLKS---KGLI------- 1753
Query: 936 ADAIQKNVFFWNATDPCPQPAQLNASMMMPCSYLKGFDYFEG-S--ELAYIYACLFLMVV 992
P A F G S E YA L
Sbjct: 1754 -----------------PADA-----------------TFAGHSLGE----YAAL----- 1770
Query: 993 PFICGAAGYGVIKLQD-----RKR-RALKMKQEELKNGPSKANLAVGTVDKMAVREWLHA 1046
A+ V+ ++ R +++ + G S N + ++ V
Sbjct: 1771 -----ASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRS--NYGMIAINPGRVAASFSQ 1823
Query: 1047 NHKRFVKIRLGPETCLHTVDRKGEKLRTVNFKNCDTVTIEESQPERGKKKHPMVLIRVHR 1106
++V R+G T G + VN+ N + V
Sbjct: 1824 EALQYVVERVGKRT--------GWLVEIVNY-NVENQQY--------------V------ 1854
Query: 1107 DHDLVLEFDSLAARKKFMNKMEGFLNAMKKHLI-IVQSPRELMLAKAETRERRQKKLEHF 1165
A + ++ + LN +K I I++ + L L + E H
Sbjct: 1855 ----------AAGDLRALDTVTNVLNFIKLQKIDIIELQKSLSLEEVE---------GHL 1895
Query: 1166 F 1166
F
Sbjct: 1896 F 1896
Score = 47.0 bits (111), Expect = 9e-05
Identities = 38/272 (13%), Positives = 75/272 (27%), Gaps = 92/272 (33%)
Query: 213 GMFTAAEVEAIRKITLWDIIVNATDIGADAIQKNVFFWNATDPCPQ-PAQL--------- 262
GM +A + + W+ AD K+ + ++ D P L
Sbjct: 1632 GMDLYKTSKAAQDV--WN--------RADNHFKDTYGFSILDIVINNPVNLTIHFGGEKG 1681
Query: 263 -----NASMMMPCSYLKGFDYFEPV---------SLVFQGSE-------------LAYIY 295
N S M+ + + G E + S F+ +
Sbjct: 1682 KRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEK 1741
Query: 296 ACLFLM----VVPFICGAAG-----Y-------GVIKLQD-----RKR-RALKMKQEELK 333
A + ++P AG Y V+ ++ R +++ +
Sbjct: 1742 AAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDE 1801
Query: 334 NGPSKANLAVGTVDKMAVREWLHANHKRFVKIRLGPET----------C----------L 373
G S N + ++ V ++V R+G T L
Sbjct: 1802 LGRS--NYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVEIVNYNVENQQYVAAGDL 1859
Query: 374 HTVDRKGEKLRTVNFKNCDTVTIEESQFSTNR 405
+D L + + D + +++S S
Sbjct: 1860 RALDTVTNVLNFIKLQKIDIIELQKS-LSLEE 1890
Score = 43.1 bits (101), Expect = 0.001
Identities = 59/318 (18%), Positives = 88/318 (27%), Gaps = 119/318 (37%)
Query: 1207 GM------KSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRI-IFDMCD 1259
GM S A + ++N D H +D I D+
Sbjct: 1630 GMGMDLYKTSKAA--QDVWNRADN---------------------HFKDTYGFSILDIVI 1666
Query: 1260 ND--RNGVIDKGELAEMLRS-LVEMARTTSLTDSQVTELIDG---------MFQSPREL- 1306
N+ + GE + +R M T + TE I F+S + L
Sbjct: 1667 NNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLL 1726
Query: 1307 ---------MLA--KAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDET------GE 1349
+ KA + + K GL P D T GE
Sbjct: 1727 SATQFTQPALTLMEKAAFEDLKSK--------------GLIP------ADATFAGHSLGE 1766
Query: 1350 VVMRTSLSRAEFASALGMKSDA---VFVR--MMFNIVDKDGDGRISF------------- 1391
+L A A + + VF R M V +D GR ++
Sbjct: 1767 Y---AAL--ASLADVMSI-ESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAAS 1820
Query: 1392 --QEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNG--VIDKGE------LAEMLRSLVEMA 1441
QE L VV T + I+ N N V G+ + +L +
Sbjct: 1821 FSQEALQYVVERVGKRTGWLVEIV---NYNVENQQYVA-AGDLRALDTVTNVLNFIKLQK 1876
Query: 1442 -RTTSLTDSQVTELIDGM 1458
L S E ++G
Sbjct: 1877 IDIIELQKSLSLEEVEGH 1894
Score = 43.1 bits (101), Expect = 0.001
Identities = 72/393 (18%), Positives = 124/393 (31%), Gaps = 149/393 (37%)
Query: 1162 LEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD---AVFVRMM 1218
L H+ A L G PGE R A G AV +
Sbjct: 246 LAHYVVTAKLL--GFTPGELRSY-----------------LKGATGHSQGLVTAVAIAE- 285
Query: 1219 FNIVDKDGDGRISFQEFLDTV-----VLF---SRGH-----TEDKLRIIFDMCDNDRNGV 1265
D S++ F +V VLF R + T I+ D +N+
Sbjct: 286 -------TD---SWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENN---- 331
Query: 1266 IDKGELAEMLRSLVEMARTTSLTDSQVTELID--------------GMFQSPRELMLA-K 1310
+G + ML S+ ++LT QV + ++ + + L+++
Sbjct: 332 --EGVPSPML-SI------SNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGP 382
Query: 1311 AETRERRQKKLEHF---FREAYALTFGLK----PGEKRRRDDETGEVVMR---TSLSRAE 1360
++ L R+A A + GL P +R+ + R + +
Sbjct: 383 PQS-------LYGLNLTLRKAKAPS-GLDQSRIPFSERKL-----KFSNRFLPVA---SP 426
Query: 1361 FASALGMKSDAVFVRMMFNIVDKD-GDGRISF-QEFLDTVVLFSRGHTEDKLRIIFDMCD 1418
F S L + A ++++KD +SF + + V T D D+
Sbjct: 427 FHSHL-LV-PAS------DLINKDLVKNNVSFNAKDIQIPVY----DTFDGS----DLRV 470
Query: 1419 NDRNGVIDKGELAEMLRSLVEMART-----TSLTDSQVTELID-GMFQDAGLDSKDFLTY 1472
+ +V+ + T + T ++D G +GL LT+
Sbjct: 471 LS----------GSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGV---LTH 517
Query: 1473 QDFKLMMRDYKGDFVAIG--LDCK-----GAKQ 1498
+ +D G V + LD G KQ
Sbjct: 518 R-----NKDGTGVRVIVAGTLDINPDDDYGFKQ 545
Score = 34.6 bits (79), Expect = 0.40
Identities = 35/207 (16%), Positives = 63/207 (30%), Gaps = 61/207 (29%)
Query: 64 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 123
G K + I + DG++ ++ + E F
Sbjct: 1678 GEKGKRIRENYSAMIFETIVDGKLKTEKIFKEI-------NEHSTSYTF-------RS-- 1721
Query: 124 DKGELAE-------MLRSLVEMA-------RTSFPSG----G---------AAT------ 150
+KG L+ + L+E A + P+ G A+
Sbjct: 1722 EKGLLSATQFTQPALT--LMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSI 1779
Query: 151 -TVVKIV-LRG-YYSYGNSLDNIDLYIGGMLESHEGP-GPLFTNIILEQFTRLRDADRFW 206
++V++V RG D + GM+ + G F+ L+ W
Sbjct: 1780 ESLVEVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGW 1839
Query: 207 F-E----NTENGMFTAA-EVEAIRKIT 227
E N EN + AA ++ A+ +T
Sbjct: 1840 LVEIVNYNVENQQYVAAGDLRALDTVT 1866
Score = 34.3 bits (78), Expect = 0.60
Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 47/137 (34%)
Query: 1683 AHSLYVFLFALMLIHGLARITGPPRFWIYFIGPG----------VVF------------I 1720
H + F+++ I I P I+F G ++F I
Sbjct: 1651 NHFKDTYGFSILDIV----INNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLKTEKI 1706
Query: 1721 LDKVVSLRTKYM------ALD--------ILETELLPSDVIKIRFYRPPNFTY--HS-GQ 1763
++ T Y L + E + +K + P + T+ HS G+
Sbjct: 1707 FKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGE 1766
Query: 1764 WVRLACTA----FKNAA 1776
+ LA A ++
Sbjct: 1767 YAALASLADVMSIESLV 1783
Score = 32.7 bits (74), Expect = 1.9
Identities = 37/196 (18%), Positives = 58/196 (29%), Gaps = 72/196 (36%)
Query: 1585 DSHIQFHKIAACTALFFSLIHTVGH-----IINFYHVSTQPLEHLH-----------CLT 1628
D+H + FS++ V + I+F + + + L
Sbjct: 1650 DNHFK-------DTYGFSILDIVINNPVNLTIHFGGEKGKRIRENYSAMIFETIVDGKLK 1702
Query: 1629 AEVHFP--SDYKPGITFW-----LFQTITGITGVLLFVIMVLIFVFAHPTIRKK------ 1675
E F +++ TF L T T L ++ F ++ K
Sbjct: 1703 TEKIFKEINEHSTSYTFRSEKGLLSATQ--FTQPALTLMEKAAFE----DLKSKGLIPAD 1756
Query: 1676 AYNWFWLA-HSL--YVFLFALMLIHGLARITGPPRFWIYFIGPGVVFILD--KVVSLRTK 1730
A A HSL Y AL LA V+ I +VV R
Sbjct: 1757 AT----FAGHSLGEYA---AL---ASLA---------------DVMSIESLVEVVFYRGM 1791
Query: 1731 YMALDILETELLPSDV 1746
M + + EL S+
Sbjct: 1792 TMQVAVPRDELGRSNY 1807
Score = 32.7 bits (74), Expect = 1.9
Identities = 36/230 (15%), Positives = 66/230 (28%), Gaps = 83/230 (36%)
Query: 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1425
G K + I + DG++ ++ + E F
Sbjct: 1678 GEKGKRIRENYSAMIFETIVDGKLKTEKIFKEI-------NEHSTSYTF-------RS-- 1721
Query: 1426 DKGELAE-------MLRSLVEMARTTSLTDSQVTELI--DGMFQD----AG--------L 1464
+KG L+ + L+E A E + G+ AG L
Sbjct: 1722 EKGLLSATQFTQPALT--LMEKA---------AFEDLKSKGLIPADATFAGHSLGEYAAL 1770
Query: 1465 DSK-DFLTYQD-FKLMMRDYKGDFVAI-GLDCKGAKQNFLDTSTNVARMTSFN---IEPI 1518
S D ++ + ++ V G+ + A +N M + N +
Sbjct: 1771 ASLADVMSIESLVEV---------VFYRGMTMQVAVPRDELGRSNYG-MIAINPGRVAAS 1820
Query: 1519 LDEDKSWFQLKLVPITT--FLE------ENRQNIFYLFIFYVI---TIAL 1557
++ + ++ V T +E EN+Q YV AL
Sbjct: 1821 FSQEALQYVVERVGKRTGWLVEIVNYNVENQQ--------YVAAGDLRAL 1862
Score = 31.9 bits (72), Expect = 2.7
Identities = 35/225 (15%), Positives = 57/225 (25%), Gaps = 108/225 (48%)
Query: 458 EGGKYIPFHRAGYDRSTGTSPNSPRQQINRVSSWID---GSFIYSTSEAWLNAMRSFTNG 514
E GK I R Y + + + ++ I+ S+ + + + L+A
Sbjct: 1679 EKGKRI---RENYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSA------- 1728
Query: 515 SLATDASGKMPVKNTMRVPLFNNPVPHSLRTLSPERLYLLGDARSNQNPALLAFSILFFR 574
T + T Q PAL F
Sbjct: 1729 ---T--------QFT-------------------------------Q-PALTLMEKAAFE 1745
Query: 575 WHNVIAAQIEDKHPELSDEEIFQKTRRLVVA--SLQNVIAYEYIPAF--LGRSLSP---- 626
+L + + A SL EY A L +S
Sbjct: 1746 --------------DLKSKGLIPADA--TFAGHSLG-----EY-AALASLADVMSIESLV 1783
Query: 627 ----YRG----------------YKM-DVHPG-ISHVFQTAAFRF 649
YRG Y M ++PG ++ F A ++
Sbjct: 1784 EVVFYRGMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQY 1828
>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand,
helix-loop- helix, nervous system, metal binding protein;
NMR {Haemopis marmorata} PDB: 1yx8_A
Length = 83
Score = 52.2 bits (126), Expect = 2e-08
Identities = 13/75 (17%), Positives = 30/75 (40%), Gaps = 3/75 (4%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+ +L F D + +G + EL + +L +L+ +V E + + A +
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDA---YKALSKDKVKEASAKLIKMADKN 61
Query: 1466 SKDFLTYQDFKLMMR 1480
S ++ ++F
Sbjct: 62 SDGKISKEEFLNANA 76
Score = 41.5 bits (98), Expect = 1e-04
Identities = 10/55 (18%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
+ +L F D + +G + EL + +L +L+ +V E + +
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDA---YKALSKDKVKEASAKLIK 56
Score = 41.1 bits (97), Expect = 2e-04
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 50 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
++T + + AL + + DK+ DG+IS +EFL+
Sbjct: 29 LQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73
Score = 41.1 bits (97), Expect = 2e-04
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 1193 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
++T + + AL + + DK+ DG+IS +EFL+
Sbjct: 29 LQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73
Score = 41.1 bits (97), Expect = 2e-04
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 1352 MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
++T + + AL + + DK+ DG+IS +EFL+
Sbjct: 29 LQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLN 73
Score = 40.3 bits (95), Expect = 3e-04
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 73 RMMFNIVDKDGDGRISFQEF------LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKG 126
F +D +GDG ++ E LD S+ ++ + M D + +G I K
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 127 ELAEMLRSLV 136
E L+
Sbjct: 70 EFLNANAELL 79
Score = 40.3 bits (95), Expect = 3e-04
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 1216 RMMFNIVDKDGDGRISFQEF------LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKG 1269
F +D +GDG ++ E LD S+ ++ + M D + +G I K
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 1270 ELAEMLRSLV 1279
E L+
Sbjct: 70 EFLNANAELL 79
Score = 40.3 bits (95), Expect = 3e-04
Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 1375 RMMFNIVDKDGDGRISFQEF------LDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKG 1428
F +D +GDG ++ E LD S+ ++ + M D + +G I K
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69
Query: 1429 ELAEMLRSLV 1438
E L+
Sbjct: 70 EFLNANAELL 79
Score = 37.2 bits (87), Expect = 0.004
Identities = 7/34 (20%), Positives = 14/34 (41%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+ +L F D + +G + EL + +L
Sbjct: 5 VKAELEAAFKKLDANGDGYVTALELQTFMVTLDA 38
>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding,
phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8
Length = 167
Score = 54.3 bits (131), Expect = 3e-08
Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R+M +++D+D G + F EF + L++ + R F D+DR+G +D EL +
Sbjct: 44 CRLMVSMLDRDMSGTMGFNEFKE---LWAV---LNGWRQHFISFDSDRSGTVDPQELQKA 97
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
L ++ L + ++ + + K +T+ D+
Sbjct: 98 LTTMGF-----RLNP----QTVNSIAKRYSTSGK--ITFDDYIACC 132
Score = 52.8 bits (127), Expect = 1e-07
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R+M +++D+D G + F EF + L++ + R F D+DR+G +D EL +
Sbjct: 44 CRLMVSMLDRDMSGTMGFNEFKE---LWAV---LNGWRQHFISFDSDRSGTVDPQELQKA 97
Query: 132 LRSL 135
L ++
Sbjct: 98 LTTM 101
Score = 52.8 bits (127), Expect = 1e-07
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
R+M +++D+D G + F EF + L++ + R F D+DR+G +D EL +
Sbjct: 44 CRLMVSMLDRDMSGTMGFNEFKE---LWAV---LNGWRQHFISFDSDRSGTVDPQELQKA 97
Query: 1275 LRSL 1278
L ++
Sbjct: 98 LTTM 101
Score = 38.1 bits (89), Expect = 0.009
Identities = 30/180 (16%), Positives = 54/180 (30%), Gaps = 31/180 (17%)
Query: 1249 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELML 1308
D L F ++G ID EL L ++ M +
Sbjct: 2 DPLYGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMV-SMLDRDMSGTM 59
Query: 1309 AKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASAL--- 1365
E F+E +A+ G + D +G ++ E AL
Sbjct: 60 GFNE------------FKELWAVLNGWRQHFISFDSDRSG------TVDPQELQKALTTM 101
Query: 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1425
G + + V + G +I+F +++ V L F D+ + G++
Sbjct: 102 GFRLNPQTVNSIAKRYSTSG--KITFDDYIACCV------KLRALTDSFRRRDSAQQGMV 153
Score = 33.5 bits (77), Expect = 0.34
Identities = 31/201 (15%), Positives = 59/201 (29%), Gaps = 57/201 (28%)
Query: 1215 VRMMFNIVDKDGDGRISFQE---FLDTVVL--FSRGHTEDKLRIIFDMCDNDRNGVIDKG 1269
+ F V DG+I E L + + + R++ M D D +G +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 1270 ELAEMLRSLVEMARTTSLTDSQVTELIDGM-FQSPRELMLAKAETRERRQKKLEHFFREA 1328
E E+ L + DS D P+EL A
Sbjct: 63 EFKELWAVLNGWRQHFISFDS------DRSGTVDPQELQKALTT---------------- 100
Query: 1329 YALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMM---------FN 1379
G + + +T + + ++++ + D ++ F
Sbjct: 101 ----MGFRL------NPQTVNSIAK------RYSTSGKITFDD-YIACCVKLRALTDSFR 143
Query: 1380 IVDKDGDGRI--SFQEFLDTV 1398
D G + S+ +F+ V
Sbjct: 144 RRDSAQQGMVNFSYDDFIQCV 164
Score = 33.1 bits (76), Expect = 0.45
Identities = 23/123 (18%), Positives = 37/123 (30%), Gaps = 17/123 (13%)
Query: 1374 VRMMFNIVDKDGDGRISFQE---FLDTVVL--FSRGHTEDKLRIIFDMCDNDRNGVIDKG 1428
+ F V DG+I E L + + + R++ M D D +G +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 1429 ELAEMLRSLVEMARTTSLTDS------QVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDY 1482
E E+ L + DS EL + G L Q + + Y
Sbjct: 63 EFKELWAVLNGWRQHFISFDSDRSGTVDPQELQKAL-TTMGFR----LNPQTVNSIAKRY 117
Query: 1483 KGD 1485
Sbjct: 118 STS 120
Score = 32.7 bits (75), Expect = 0.66
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 11/74 (14%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
++ E AL G + + V + G+I+F +++ V L
Sbjct: 88 TVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDYIACCV------KLRALT 139
Query: 110 IIFDMCDNDRNGVI 123
F D+ + G++
Sbjct: 140 DSFRRRDSAQQGMV 153
Score = 32.7 bits (75), Expect = 0.66
Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 11/74 (14%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
++ E AL G + + V + G+I+F +++ V L
Sbjct: 88 TVDPQELQKALTTMGFRLNPQTVNSIAKRYST--SGKITFDDYIACCV------KLRALT 139
Query: 1253 IIFDMCDNDRNGVI 1266
F D+ + G++
Sbjct: 140 DSFRRRDSAQQGMV 153
Score = 32.4 bits (74), Expect = 0.89
Identities = 15/72 (20%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
Query: 72 VRMMFNIVDKDGDGRISFQE---FLDTVVL--FSRGHTEDKLRIIFDMCDNDRNGVIDKG 126
+ F V DG+I E L + + + R++ M D D +G +
Sbjct: 4 LYGYFASV-AGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62
Query: 127 ELAEMLRSLVEM 138
E E+ L
Sbjct: 63 EFKELWAVLNGW 74
Score = 31.6 bits (72), Expect = 1.7
Identities = 12/73 (16%), Positives = 21/73 (28%), Gaps = 5/73 (6%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
D L F ++G ID EL L ++ + D
Sbjct: 2 DPLYGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML----DRDMS 56
Query: 1468 DFLTYQDFKLMMR 1480
+ + +FK +
Sbjct: 57 GTMGFNEFKELWA 69
Score = 30.0 bits (68), Expect = 4.2
Identities = 11/69 (15%), Positives = 18/69 (26%), Gaps = 2/69 (2%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
R F D D G + QE + + I +G I +
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAK--RYSTSGKITFDDYIACC 132
Query: 133 RSLVEMART 141
L + +
Sbjct: 133 VKLRALTDS 141
>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein
protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A*
1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B
1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A
Length = 173
Score = 53.6 bits (129), Expect = 6e-08
Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 25/146 (17%)
Query: 1341 RRRDDETGEV-------VMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQE 1393
+ + EV ++ ++R G D R M ++D D G++ F+E
Sbjct: 11 AQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTC--RSMVAVMDSDTTGKLGFEE 68
Query: 1394 FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE 1453
F L++ K + I+ D DR+G I EL + + +
Sbjct: 69 FKY---LWNN---IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFH------LNEHLYS 116
Query: 1454 LIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+I + D G + + + +F +
Sbjct: 117 MIIRRYSDEGGN----MDFDNFISCL 138
Score = 52.8 bits (127), Expect = 9e-08
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 39 RRRDDETGEV-------VMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQE 91
+ + EV ++ ++R G D R M ++D D G++ F+E
Sbjct: 11 AQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTC--RSMVAVMDSDTTGKLGFEE 68
Query: 92 FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
F L++ K + I+ D DR+G I EL +
Sbjct: 69 FKY---LWNN---IKKWQAIYKQFDVDRSGTIGSSELPGAFEAA 106
Score = 52.8 bits (127), Expect = 9e-08
Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 15/104 (14%)
Query: 1182 RRRDDETGEV-------VMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQE 1234
+ + EV ++ ++R G D R M ++D D G++ F+E
Sbjct: 11 AQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTC--RSMVAVMDSDTTGKLGFEE 68
Query: 1235 FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
F L++ K + I+ D DR+G I EL +
Sbjct: 69 FKY---LWNN---IKKWQAIYKQFDVDRSGTIGSSELPGAFEAA 106
Score = 39.3 bits (92), Expect = 0.004
Identities = 41/200 (20%), Positives = 65/200 (32%), Gaps = 46/200 (23%)
Query: 1216 RMMFNIVDKDGDGRISFQE--------FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 1267
R +F + D D +S E L + G D R + + D+D G +
Sbjct: 7 RRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLG 65
Query: 1268 KGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFRE 1327
E + ++ + D + G S EL A + L
Sbjct: 66 FEEFKYLWNNIKKWQAIYKQFDVDRS----GTIGS-SELPGAFEAAGFHLNEHLYSMIIR 120
Query: 1328 AYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMM---FNIVDKD 1384
Y DE G ++ F S L V + M F +DKD
Sbjct: 121 RY--------------SDEGG------NMDFDNFISCL------VRLDAMFRAFKSLDKD 154
Query: 1385 GDGRI--SFQEFLDTVVLFS 1402
G G+I + QE+L + ++S
Sbjct: 155 GTGQIQVNIQEWL-QLTMYS 173
Score = 36.2 bits (84), Expect = 0.046
Identities = 31/194 (15%), Positives = 56/194 (28%), Gaps = 53/194 (27%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE---MARTTSLTDSQVTELIDGM----- 1299
+ R +F D + + EL +L +V +T ++ M
Sbjct: 3 VRQFRRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTT 61
Query: 1300 ----FQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRD-DETGEVVMRT 1354
F+ + L KK + +++ D D +G
Sbjct: 62 GKLGFEEFKYLW--------NNIKKWQAIYKQF---------------DVDRSG------ 92
Query: 1355 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1411
++ +E A G + M+ D G + F F+ +V D +
Sbjct: 93 TIGSSELPGAFEAAGFHLNEHLYSMIIR-RYSDEGGNMDFDNFISCLV------RLDAMF 145
Query: 1412 IIFDMCDNDRNGVI 1425
F D D G I
Sbjct: 146 RAFKSLDKDGTGQI 159
Score = 35.5 bits (82), Expect = 0.067
Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 10/74 (13%)
Query: 53 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 109
++ +E A G + M+ D G + F F+ +V D +
Sbjct: 93 TIGSSELPGAFEAAGFHLNEHLYSMIIR-RYSDEGGNMDFDNFISCLV------RLDAMF 145
Query: 110 IIFDMCDNDRNGVI 123
F D D G I
Sbjct: 146 RAFKSLDKDGTGQI 159
Score = 35.5 bits (82), Expect = 0.067
Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 10/74 (13%)
Query: 1196 SLSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLR 1252
++ +E A G + M+ D G + F F+ +V D +
Sbjct: 93 TIGSSELPGAFEAAGFHLNEHLYSMIIR-RYSDEGGNMDFDNFISCLV------RLDAMF 145
Query: 1253 IIFDMCDNDRNGVI 1266
F D D G I
Sbjct: 146 RAFKSLDKDGTGQI 159
Score = 35.1 bits (81), Expect = 0.10
Identities = 14/74 (18%), Positives = 26/74 (35%), Gaps = 9/74 (12%)
Query: 73 RMMFNIVDKDGDGRISFQE--------FLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVID 124
R +F + D D +S E L + G D R + + D+D G +
Sbjct: 7 RRLFAQLAGD-DMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLG 65
Query: 125 KGELAEMLRSLVEM 138
E + ++ +
Sbjct: 66 FEEFKYLWNNIKKW 79
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand,
helix-loop-helix, calcium-binding, calmodulin
superfamily, transferase, plant protein; NMR {Glycine
max} SCOP: a.39.1.5
Length = 87
Score = 50.2 bits (121), Expect = 1e-07
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 46 GEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-- 103
+ M LS E ++ +F ++D D G I+F E L G
Sbjct: 9 DDKHMAERLSEEEIGG----------LKELFKMIDTDNSGTITFDEL--KDGLKRVGSEL 56
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGE-LAEML 132
E +++ + D D D++G ID GE +A +
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGEFIAATV 86
Score = 50.2 bits (121), Expect = 1e-07
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 1189 GEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-- 1246
+ M LS E ++ +F ++D D G I+F E L G
Sbjct: 9 DDKHMAERLSEEEIGG----------LKELFKMIDTDNSGTITFDEL--KDGLKRVGSEL 56
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGE-LAEML 1275
E +++ + D D D++G ID GE +A +
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGEFIAATV 86
Score = 50.2 bits (121), Expect = 1e-07
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 15/90 (16%)
Query: 1348 GEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-- 1405
+ M LS E ++ +F ++D D G I+F E L G
Sbjct: 9 DDKHMAERLSEEEIGG----------LKELFKMIDTDNSGTITFDEL--KDGLKRVGSEL 56
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGE-LAEML 1434
E +++ + D D D++G ID GE +A +
Sbjct: 57 MESEIKDLMDAADIDKSGTIDYGEFIAATV 86
Score = 45.6 bits (109), Expect = 4e-06
Identities = 21/99 (21%), Positives = 38/99 (38%), Gaps = 17/99 (17%)
Query: 1384 DGDGRISFQEFLDTVVLFSRGHTED---KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1440
G I + L +E+ L+ +F M D D +G I EL + L+ +
Sbjct: 1 HSSGHIDDDDKHMAERL-----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS- 54
Query: 1441 ARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
L +S++ +L+ A +D + Y +F
Sbjct: 55 ----ELMESEIKDLM----DAADIDKSGTIDYGEFIAAT 85
Score = 43.7 bits (104), Expect = 3e-05
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 13/76 (17%)
Query: 1225 DGDGRISFQEFLDTVVLFSRGHTED---KLRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 1281
G I + L +E+ L+ +F M D D +G I EL + L+ +
Sbjct: 1 HSSGHIDDDDKHMAERL-----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGS- 54
Query: 1282 ARTTSLTDSQVTELID 1297
L +S++ +L+D
Sbjct: 55 ----ELMESEIKDLMD 66
Score = 39.8 bits (94), Expect = 5e-04
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 8/57 (14%)
Query: 82 DGDGRISFQEFLDTVVLFSRGHTED---KLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
G I + L +E+ L+ +F M D D +G I EL + L+ +
Sbjct: 1 HSSGHIDDDDKHMAERL-----SEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV 52
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural
genomics, protein structure initiative; NMR {Arabidopsis
thaliana} SCOP: a.39.1.5
Length = 67
Score = 49.8 bits (120), Expect = 1e-07
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ +F DK+ DG++S EF V + T++ + F+ D D NG ++ E
Sbjct: 4 KRVFEKFDKNKDGKLSLDEF--REVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 131 MLRSL 135
+ +
Sbjct: 62 CIEKM 66
Score = 49.8 bits (120), Expect = 1e-07
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ +F DK+ DG++S EF V + T++ + F+ D D NG ++ E
Sbjct: 4 KRVFEKFDKNKDGKLSLDEF--REVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 1274 MLRSL 1278
+ +
Sbjct: 62 CIEKM 66
Score = 49.8 bits (120), Expect = 1e-07
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1432
+ +F DK+ DG++S EF V + T++ + F+ D D NG ++ E
Sbjct: 4 KRVFEKFDKNKDGKLSLDEF--REVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
Query: 1433 MLRSL 1437
+ +
Sbjct: 62 CIEKM 66
Score = 45.6 bits (109), Expect = 3e-06
Identities = 10/71 (14%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ +F+ D +++G + E E+ + T + + F++ +D
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSP-----YFTQEDIVK----FFEEIDVDGNGE 53
Query: 1470 LTYQDFKLMMR 1480
L +F +
Sbjct: 54 LNADEFTSCIE 64
Score = 39.8 bits (94), Expect = 3e-04
Identities = 6/47 (12%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ +F+ D +++G + E E+ + T + + +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSP-----YFTQEDIVKFFE 44
Score = 39.0 bits (92), Expect = 7e-04
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 53 SLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
LS EF A A + F +D DG+G ++ EF
Sbjct: 17 KLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Score = 39.0 bits (92), Expect = 7e-04
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 1196 SLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
LS EF A A + F +D DG+G ++ EF
Sbjct: 17 KLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Score = 39.0 bits (92), Expect = 7e-04
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 1355 SLSRAEF---ASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
LS EF A A + F +D DG+G ++ EF
Sbjct: 17 KLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFT 60
Score = 34.0 bits (79), Expect = 0.038
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ +F+ D +++G + E E+ +
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAF 30
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Length = 94
Score = 50.4 bits (121), Expect = 1e-07
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 1389 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1448
S E L L +E+++R F + D D NG I EL ++ +L E LTD
Sbjct: 10 GSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEK-----LTD 64
Query: 1449 SQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+ +D M ++A +D + Y++F MM
Sbjct: 65 EE----VDEMIREADIDGDGQVNYEEFVQMM 91
Score = 44.2 bits (105), Expect = 2e-05
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 1230 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289
S E L L +E+++R F + D D NG I EL ++ +L E LTD
Sbjct: 10 GSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEK-----LTD 64
Query: 1290 SQVTELID 1297
+V E+I
Sbjct: 65 EEVDEMIR 72
Score = 39.2 bits (92), Expect = 0.001
Identities = 15/49 (30%), Positives = 23/49 (46%)
Query: 87 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
S E L L +E+++R F + D D NG I EL ++ +L
Sbjct: 10 GSSGENLYFQSLMKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNL 58
Score = 38.8 bits (91), Expect = 0.001
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
R F + DKDG+G IS E + T++++ + D D +G ++ E +M+
Sbjct: 32 REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91
Query: 133 RS 134
+
Sbjct: 92 TA 93
Score = 38.8 bits (91), Expect = 0.001
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
R F + DKDG+G IS E + T++++ + D D +G ++ E +M+
Sbjct: 32 REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91
Query: 1276 RS 1277
+
Sbjct: 92 TA 93
Score = 38.8 bits (91), Expect = 0.001
Identities = 16/62 (25%), Positives = 30/62 (48%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
R F + DKDG+G IS E + T++++ + D D +G ++ E +M+
Sbjct: 32 REAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 91
Query: 1435 RS 1436
+
Sbjct: 92 TA 93
Score = 36.5 bits (85), Expect = 0.010
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
S AE LG K V M D DGDG+++++EF+
Sbjct: 47 SAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Score = 36.5 bits (85), Expect = 0.010
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
S AE LG K V M D DGDG+++++EF+
Sbjct: 47 SAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
Score = 36.5 bits (85), Expect = 0.010
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Query: 1357 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
S AE LG K V M D DGDG+++++EF+
Sbjct: 47 SAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 88
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell
junction, cell projection, coiled coil, endocytosis,
membrane, phosphoprotein; NMR {Homo sapiens}
Length = 111
Score = 50.5 bits (121), Expect = 2e-07
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
R +FN DK G ++ + +L + +L I+++ D D++G + E +
Sbjct: 17 RQLFNSHDKTMSGHLTGPQART--ILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
Query: 133 RSLVEMARTSFP 144
L+++A + P
Sbjct: 75 H-LIDVAMSGQP 85
Score = 50.2 bits (120), Expect = 2e-07
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
R +FN DK G ++ + +L + +L I+++ D D++G + E +
Sbjct: 17 RQLFNSHDKTMSGHLTGPQART--ILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
Query: 1276 RSLVEMAR 1283
L+++A
Sbjct: 75 H-LIDVAM 81
Score = 50.2 bits (120), Expect = 2e-07
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
R +FN DK G ++ + +L + +L I+++ D D++G + E +
Sbjct: 17 RQLFNSHDKTMSGHLTGPQART--ILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAM 74
Query: 1435 RSLVEMAR 1442
L+++A
Sbjct: 75 H-LIDVAM 81
Score = 29.7 bits (67), Expect = 3.4
Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 17/76 (22%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS---QVTELIDGMFQDAGL 1464
K R +F+ D +G + + +L +SL + + L D +
Sbjct: 14 LKYRQLFNSHDKTMSGHLTGPQARTILMQ-------SSLPQAQLASIWNLSD-------I 59
Query: 1465 DSKDFLTYQDFKLMMR 1480
D LT ++F L M
Sbjct: 60 DQDGKLTAEEFILAMH 75
>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal
binding protein; 2.10A {Mus musculus} PDB: 2g2b_A
Length = 147
Score = 51.5 bits (123), Expect = 2e-07
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1425
G K+ + ++ + ++ + E ++ + D + NG I
Sbjct: 9 GGKAFGLLKAQQEERLEGINKQFLDDPKYSNDE--DLPSKLEA-FKVKYMEFDLNGNGDI 65
Query: 1426 DKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
D L ML L T ++ LI ++ S++ +Y DF MM
Sbjct: 66 DIMSLKRMLEKLGV-----PKTHLELKRLI----REVSSGSEETFSYSDFLRMML 111
Score = 45.3 bits (107), Expect = 3e-05
Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 8/106 (7%)
Query: 31 FGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQ 90
FGL ++ R + + + + +++ ++ + D +G+G I
Sbjct: 13 FGLLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEA----FKVKYMEFDLNGNGDIDIM 68
Query: 91 EFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+L G T +L+ + + + M+
Sbjct: 69 SL--KRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG 112
Score = 45.3 bits (107), Expect = 3e-05
Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 8/106 (7%)
Query: 1333 FGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQ 1392
FGL ++ R + + + + +++ ++ + D +G+G I
Sbjct: 13 FGLLKAQQEERLEGINKQFLDDPKYSNDEDLPSKLEA----FKVKYMEFDLNGNGDIDIM 68
Query: 1393 EFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+L G T +L+ + + + M+
Sbjct: 69 SL--KRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLG 112
Score = 44.1 bits (104), Expect = 7e-05
Identities = 20/127 (15%), Positives = 37/127 (29%), Gaps = 17/127 (13%)
Query: 1207 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266
G K+ + ++ + ++ + E ++ + D + NG I
Sbjct: 9 GGKAFGLLKAQQEERLEGINKQFLDDPKYSNDE--DLPSKLEA-FKVKYMEFDLNGNGDI 65
Query: 1267 DKGELAEMLRSLVEMARTTSLTDSQVTELI-------DGM--FQSPRELMLAKAETRERR 1317
D L ML L T ++ LI + + +ML K R
Sbjct: 66 DIMSLKRMLEKLGV-----PKTHLELKRLIREVSSGSEETFSYSDFLRMMLGKRSAILRM 120
Query: 1318 QKKLEHF 1324
E
Sbjct: 121 ILMYEEK 127
Score = 43.0 bits (101), Expect = 1e-04
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 64 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVI 123
G K+ + ++ + ++ + E ++ + D + NG I
Sbjct: 9 GGKAFGLLKAQQEERLEGINKQFLDDPKYSNDE--DLPSKLEA-FKVKYMEFDLNGNGDI 65
Query: 124 DKGELAEMLRSL 135
D L ML L
Sbjct: 66 DIMSLKRMLEKL 77
Score = 40.3 bits (94), Expect = 0.001
Identities = 5/31 (16%), Positives = 13/31 (41%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEF 1235
LG+ + ++ + V + S+ +F
Sbjct: 76 KLGVPKTHLELKRLIREVSSGSEETFSYSDF 106
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium,
RAS signal transduction, endocytosis/exocytosis complex;
NMR {Mus musculus} SCOP: a.39.1.6
Length = 92
Score = 48.6 bits (116), Expect = 5e-07
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
F + D +G I + +L I+++ D D++G + E
Sbjct: 14 QFKTIQPDLNGFIPGSAAKE--FFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH- 70
Query: 135 LVEMARTSFP 144
LV + +
Sbjct: 71 LVVARKNGYD 80
Score = 48.2 bits (115), Expect = 6e-07
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
F + D +G I + +L I+++ D D++G + E
Sbjct: 14 QFKTIQPDLNGFIPGSAAKE--FFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH- 70
Query: 1278 LVEMAR 1283
LV +
Sbjct: 71 LVVARK 76
Score = 48.2 bits (115), Expect = 6e-07
Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 3/66 (4%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
F + D +G I + +L I+++ D D++G + E
Sbjct: 14 QFKTIQPDLNGFIPGSAAKE--FFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH- 70
Query: 1437 LVEMAR 1442
LV +
Sbjct: 71 LVVARK 76
Score = 29.3 bits (66), Expect = 3.0
Identities = 14/76 (18%), Positives = 17/76 (22%), Gaps = 17/76 (22%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS---QVTELIDGMFQDAGL 1464
F D NG I E + L + EL D
Sbjct: 9 QYYVNQFKTIQPDLNGFIPGSAAKEFF-------TKSKLPILELSHIWELSD-------F 54
Query: 1465 DSKDFLTYQDFKLMMR 1480
D LT +F
Sbjct: 55 DKDGALTLDEFCAAFH 70
Score = 29.3 bits (66), Expect = 3.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 72 VRMMFNIVDKDGDGRISFQEF 92
+ ++ + D D DG ++ EF
Sbjct: 45 LSHIWELSDFDKDGALTLDEF 65
Score = 29.3 bits (66), Expect = 3.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1215 VRMMFNIVDKDGDGRISFQEF 1235
+ ++ + D D DG ++ EF
Sbjct: 45 LSHIWELSDFDKDGALTLDEF 65
Score = 29.3 bits (66), Expect = 3.2
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1374 VRMMFNIVDKDGDGRISFQEF 1394
+ ++ + D D DG ++ EF
Sbjct: 45 LSHIWELSDFDKDGALTLDEF 65
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping,
EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB:
1h4b_A
Length = 86
Score = 48.0 bits (115), Expect = 6e-07
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+F D +GDG+IS E L + G T D++R + D D +G I E +
Sbjct: 14 ERIFKRFDTNGDGKISSSEL--GDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 132 LRS 134
R+
Sbjct: 72 ARA 74
Score = 48.0 bits (115), Expect = 6e-07
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+F D +GDG+IS E L + G T D++R + D D +G I E +
Sbjct: 14 ERIFKRFDTNGDGKISSSEL--GDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 1275 LRS 1277
R+
Sbjct: 72 ARA 74
Score = 48.0 bits (115), Expect = 6e-07
Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+F D +GDG+IS E L + G T D++R + D D +G I E +
Sbjct: 14 ERIFKRFDTNGDGKISSSEL--GDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71
Query: 1434 LRS 1436
R+
Sbjct: 72 ARA 74
Score = 41.9 bits (99), Expect = 1e-04
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
LG + VR M +D DGDG ISF EF D
Sbjct: 39 TLGSVTPD-EVRRMMAEIDTDGDGFISFDEFTD 70
Score = 41.9 bits (99), Expect = 1e-04
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
LG + VR M +D DGDG ISF EF D
Sbjct: 39 TLGSVTPD-EVRRMMAEIDTDGDGFISFDEFTD 70
Score = 41.9 bits (99), Expect = 1e-04
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
LG + VR M +D DGDG ISF EF D
Sbjct: 39 TLGSVTPD-EVRRMMAEIDTDGDGFISFDEFTD 70
Score = 41.5 bits (98), Expect = 1e-04
Identities = 17/76 (22%), Positives = 30/76 (39%), Gaps = 10/76 (13%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
IF D + +G I EL + L++L + T +V M + D F
Sbjct: 13 RERIFKRFDTNGDGKISSSELGDALKTLGSV------TPDEVRR----MMAEIDTDGDGF 62
Query: 1470 LTYQDFKLMMRDYKGD 1485
+++ +F R +G
Sbjct: 63 ISFDEFTDFARANRGL 78
Score = 35.3 bits (82), Expect = 0.023
Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
IF D + +G I EL + L++L + T +V ++
Sbjct: 13 RERIFKRFDTNGDGKISSSELGDALKTLGSV------TPDEVRRMMA 53
Score = 33.8 bits (78), Expect = 0.064
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
IF D + +G I EL + L++L
Sbjct: 13 RERIFKRFDTNGDGKISSSELGDALKTL 40
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A;
EF-hand like, unknown function; 1.60A {Homo sapiens}
SCOP: a.39.1.7
Length = 105
Score = 48.2 bits (115), Expect = 1e-06
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ F D IS +EF + T+++ +++ + G + +
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 85
Query: 1275 LRSLVEMARTTSLTDSQV 1292
S E A T T
Sbjct: 86 FSS--ETAATPMATGDSA 101
Score = 48.2 bits (115), Expect = 1e-06
Identities = 13/78 (16%), Positives = 25/78 (32%), Gaps = 2/78 (2%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ F D IS +EF + T+++ +++ + G + +
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 85
Query: 1434 LRSLVEMARTTSLTDSQV 1451
S E A T T
Sbjct: 86 FSS--ETAATPMATGDSA 101
Score = 47.9 bits (114), Expect = 1e-06
Identities = 14/80 (17%), Positives = 28/80 (35%), Gaps = 2/80 (2%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ F D IS +EF + T+++ +++ + G + +
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSR 85
Query: 132 LRSLVEMARTSFPSGGAATT 151
S E A T +G +A
Sbjct: 86 FSS--ETAATPMATGDSAVA 103
Score = 45.2 bits (107), Expect = 1e-05
Identities = 17/97 (17%), Positives = 33/97 (34%), Gaps = 10/97 (10%)
Query: 1389 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1448
+ ++ L + H + F+ D + I + E + V+ LTD
Sbjct: 6 TADRDILARLHKAVTSH-YHAITQEFENFDTMKTNTISREEFRAICNRRVQ-----ILTD 59
Query: 1449 SQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGD 1485
Q D ++ + +++K L Y DF
Sbjct: 60 EQ----FDRLWNEMPVNAKGRLKYPDFLSRFSSETAA 92
Score = 41.7 bits (98), Expect = 2e-04
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 6/70 (8%)
Query: 1230 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289
+ ++ L + H + F+ D + I + E + V+ LTD
Sbjct: 6 TADRDILARLHKAVTSH-YHAITQEFENFDTMKTNTISREEFRAICNRRVQ-----ILTD 59
Query: 1290 SQVTELIDGM 1299
Q L + M
Sbjct: 60 EQFDRLWNEM 69
Score = 41.7 bits (98), Expect = 2e-04
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 54 LSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
+SR EF + ++N + + GR+ + +FL
Sbjct: 41 ISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLS 84
Score = 41.7 bits (98), Expect = 2e-04
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 1197 LSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
+SR EF + ++N + + GR+ + +FL
Sbjct: 41 ISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLS 84
Score = 41.7 bits (98), Expect = 2e-04
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 1356 LSRAEFASAL---GMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
+SR EF + ++N + + GR+ + +FL
Sbjct: 41 ISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLS 84
Score = 34.0 bits (78), Expect = 0.10
Identities = 7/51 (13%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Query: 87 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVE 137
+ ++ L + H + F+ D + I + E + V+
Sbjct: 6 TADRDILARLHKAVTSH-YHAITQEFENFDTMKTNTISREEFRAICNRRVQ 55
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase
superfami oxidoreductase; 2.20A {Escherichia coli} SCOP:
b.43.4.2 c.25.1.1
Length = 232
Score = 50.6 bits (122), Expect = 1e-06
Identities = 24/133 (18%), Positives = 51/133 (38%), Gaps = 20/133 (15%)
Query: 1736 ILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHE-NFLSCH 1794
+ E + V ++R F++ +GQ++ + F++ S P E F+ H
Sbjct: 7 VTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVV---MDERDKRPFSMASTPDEKGFIELH 63
Query: 1795 IKA--QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVA---VMVGGGI 1849
I A + + + +I ++ P G + W + + +++ GG
Sbjct: 64 IGASEINLYAKAV--------MDRILKDHQIVVDIPHG---EAWLRDDEERPMILIAGGT 112
Query: 1850 GVTPYASILNDLV 1862
G + SIL +
Sbjct: 113 GFSYARSILLTAL 125
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15);
calcium binding, signaling domain, NPF binding, FW
binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP:
a.39.1.6
Length = 95
Score = 47.4 bits (113), Expect = 2e-06
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+F DKD DG +S E + + G L I+ +CD G + K + A
Sbjct: 15 IFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH- 71
Query: 135 LVEMARTS 142
L+
Sbjct: 72 LISQKLIK 79
Score = 47.4 bits (113), Expect = 2e-06
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+F DKD DG +S E + + G L I+ +CD G + K + A
Sbjct: 15 IFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH- 71
Query: 1278 LVEMART 1284
L+
Sbjct: 72 LISQKLI 78
Score = 47.4 bits (113), Expect = 2e-06
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+F DKD DG +S E + + G L I+ +CD G + K + A
Sbjct: 15 IFLKTDKDMDGFVSGLEVRE--IFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH- 71
Query: 1437 LVEMART 1443
L+
Sbjct: 72 LISQKLI 78
Score = 30.4 bits (69), Expect = 1.4
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 72 VRMMFNIVDKDGDGRISFQEF 92
+ ++++ D G++S +F
Sbjct: 46 LAHIWSLCDTKDCGKLSKDQF 66
Score = 30.4 bits (69), Expect = 1.4
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 1215 VRMMFNIVDKDGDGRISFQEF 1235
+ ++++ D G++S +F
Sbjct: 46 LAHIWSLCDTKDCGKLSKDQF 66
Score = 30.4 bits (69), Expect = 1.4
Identities = 4/21 (19%), Positives = 12/21 (57%)
Query: 1374 VRMMFNIVDKDGDGRISFQEF 1394
+ ++++ D G++S +F
Sbjct: 46 LAHIWSLCDTKDCGKLSKDQF 66
Score = 29.7 bits (67), Expect = 2.6
Identities = 14/73 (19%), Positives = 21/73 (28%), Gaps = 11/73 (15%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK 1467
K IF D D +G + E+ E+ S + + L D
Sbjct: 10 AKYDEIFLKTDKDMDGFVSGLEVREIFLK----TGLPSTLLAHIWSLCD-------TKDC 58
Query: 1468 DFLTYQDFKLMMR 1480
L+ F L
Sbjct: 59 GKLSKDQFALAFH 71
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas
aeruginosa} PDB: 3crz_A* 1a8p_A*
Length = 257
Score = 50.5 bits (121), Expect = 2e-06
Identities = 21/137 (15%), Positives = 47/137 (34%), Gaps = 13/137 (9%)
Query: 1729 TKYMALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHE 1788
+ +L + + R P + +GQ+V + ++++ S +E
Sbjct: 1 SNLYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNYE 60
Query: 1789 NFLSCHIKA--QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGN--QDWYKFEVAVM 1844
L GP T +L++ D+ + + G D + +
Sbjct: 61 EHLEFFSIKVPDGPLTSRLQH-------LKEGDE--LMVSRKPTGTLVHDDLLPGKHLYL 111
Query: 1845 VGGGIGVTPYASILNDL 1861
+ G G+ P+ S++ D
Sbjct: 112 LSTGTGMAPFLSVIQDP 128
>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain,
POB1 EH domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6
Length = 110
Score = 47.1 bits (112), Expect = 3e-06
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 3/70 (4%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
F + D IS + + +L I+++ D D +G + E
Sbjct: 27 QFRSLQPDPSSFISGSVAKN--FFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFH- 83
Query: 135 LVEMARTSFP 144
L+ + +P
Sbjct: 84 LIVARKNGYP 93
Score = 46.3 bits (110), Expect = 5e-06
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
F + D IS + + +L I+++ D D +G + E
Sbjct: 27 QFRSLQPDPSSFISGSVAKN--FFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFH- 83
Query: 1278 LVEMAR 1283
L+ +
Sbjct: 84 LIVARK 89
Score = 46.3 bits (110), Expect = 5e-06
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 3/66 (4%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
F + D IS + + +L I+++ D D +G + E
Sbjct: 27 QFRSLQPDPSSFISGSVAKN--FFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFH- 83
Query: 1437 LVEMAR 1442
L+ +
Sbjct: 84 LIVARK 89
Score = 29.3 bits (66), Expect = 3.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 72 VRMMFNIVDKDGDGRISFQEF 92
+ ++ + D D DG ++ EF
Sbjct: 58 LSYIWELSDADCDGALTLPEF 78
Score = 29.3 bits (66), Expect = 3.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1215 VRMMFNIVDKDGDGRISFQEF 1235
+ ++ + D D DG ++ EF
Sbjct: 58 LSYIWELSDADCDGALTLPEF 78
Score = 29.3 bits (66), Expect = 3.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 1374 VRMMFNIVDKDGDGRISFQEF 1394
+ ++ + D D DG ++ EF
Sbjct: 58 LSYIWELSDADCDGALTLPEF 78
Score = 29.0 bits (65), Expect = 4.9
Identities = 11/76 (14%), Positives = 17/76 (22%), Gaps = 17/76 (22%)
Query: 1408 DKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDS---QVTELIDGMFQDAGL 1464
+ F D + I + L+ + EL D
Sbjct: 22 EYYVNQFRSLQPDPSSFISGSVAKNFFTK-------SKLSIPELSYIWELSD-------A 67
Query: 1465 DSKDFLTYQDFKLMMR 1480
D LT +F
Sbjct: 68 DCDGALTLPEFCAAFH 83
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15;
EH domain, EF-hand, solution structure, S100 protein; NMR
{Mus musculus} SCOP: a.39.1.6
Length = 99
Score = 46.7 bits (111), Expect = 3e-06
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ V+ GR+ + L G + L I+D+ D D GV+ K E LR
Sbjct: 16 YYRQVEAGNTGRVLALDAAA--FLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR- 72
Query: 1278 LVEMART-TSLTDSQVTELI 1296
LV A+ ++ S ++ +
Sbjct: 73 LVACAQNGLEVSLSSLSLAV 92
Score = 46.7 bits (111), Expect = 3e-06
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ V+ GR+ + L G + L I+D+ D D GV+ K E LR
Sbjct: 16 YYRQVEAGNTGRVLALDAAA--FLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR- 72
Query: 1437 LVEMART-TSLTDSQVTELI 1455
LV A+ ++ S ++ +
Sbjct: 73 LVACAQNGLEVSLSSLSLAV 92
Score = 46.3 bits (110), Expect = 3e-06
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+ V+ GR+ + L G + L I+D+ D D GV+ K E LR
Sbjct: 16 YYRQVEAGNTGRVLALDAAA--FLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR- 72
Query: 135 LVEMARTSFP 144
LV A+
Sbjct: 73 LVACAQNGLE 82
Score = 29.8 bits (67), Expect = 2.4
Identities = 12/68 (17%), Positives = 26/68 (38%), Gaps = 11/68 (16%)
Query: 1413 IFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTY 1472
+ + G + + A L+ + L D + + ++ A D K L+
Sbjct: 16 YYRQVEAGNTGRVLALDAAAFLK-------KSGLPDLILGK----IWDLADTDGKGVLSK 64
Query: 1473 QDFKLMMR 1480
Q+F + +R
Sbjct: 65 QEFFVALR 72
Score = 29.0 bits (65), Expect = 4.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 73 RMMFNIVDKDGDGRISFQEF 92
++++ D DG G +S QEF
Sbjct: 48 GKIWDLADTDGKGVLSKQEF 67
Score = 29.0 bits (65), Expect = 4.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 1216 RMMFNIVDKDGDGRISFQEF 1235
++++ D DG G +S QEF
Sbjct: 48 GKIWDLADTDGKGVLSKQEF 67
Score = 29.0 bits (65), Expect = 4.7
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 1375 RMMFNIVDKDGDGRISFQEF 1394
++++ D DG G +S QEF
Sbjct: 48 GKIWDLADTDGKGVLSKQEF 67
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding,
ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A
{Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Length = 338
Score = 50.5 bits (121), Expect = 3e-06
Identities = 29/152 (19%), Positives = 51/152 (33%), Gaps = 28/152 (18%)
Query: 1722 DKVVSLRTKYMALDILETELLPSDVIKIRFYRP---PNFTYHSGQWVRLACTAFKNAAYH 1778
+V + + + E L I P+ + +GQ+V +
Sbjct: 99 SEVCKTKIHHFEGTLARVENLSDSTITFDIQLDDGQPDIHFLAGQYVNVTLPG--TTETR 156
Query: 1779 SFTLTSAPHENFLSCHIK--AQGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDW 1836
S++ +S P ++ QG + L A K+ GPFG
Sbjct: 157 SYSFSSQPGNRLTGFVVRNVPQGKMSEYLSV-------QAKAGD-KMSFTGPFG------ 202
Query: 1837 YKFEVA------VMVGGGIGVTPYASILNDLV 1862
F + +M+ GG G+ P+ S+L L
Sbjct: 203 -SFYLRDVKRPVLMLAGGTGIAPFLSMLQVLE 233
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured
protein, CAM-like; NMR {Entamoeba histolytica} PDB:
2lc5_A
Length = 85
Score = 45.7 bits (109), Expect = 4e-06
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + DKD D +++ +E V+ + G T+ K+ I D D +G D+
Sbjct: 17 KEAFQLFDKDNDNKLTAEEL--GTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 1274 MLRSLVEMARTTSLTDS 1290
+ M DS
Sbjct: 75 I------MLEYGQEVDS 85
Score = 45.7 bits (109), Expect = 4e-06
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 10/77 (12%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1432
+ F + DKD D +++ +E V+ + G T+ K+ I D D +G D+
Sbjct: 17 KEAFQLFDKDNDNKLTAEEL--GTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 1433 MLRSLVEMARTTSLTDS 1449
+ M DS
Sbjct: 75 I------MLEYGQEVDS 85
Score = 43.8 bits (104), Expect = 2e-05
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ F + DKD D +++ +E V+ + G T+ K+ I D D +G D+
Sbjct: 17 KEAFQLFDKDNDNKLTAEEL--GTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 131 ML 132
++
Sbjct: 75 IM 76
Score = 41.1 bits (97), Expect = 2e-04
Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ F + D D + + EL ++R+L T +++E++ +D D+
Sbjct: 16 YKEAFQLFDKDNDNKLTAEELGTVMRALGAN-----PTKQKISEIV----KDYDKDNSGK 66
Query: 1470 LTYQDFKLMM 1479
+ F +M
Sbjct: 67 FDQETFLTIM 76
Score = 39.6 bits (93), Expect = 7e-04
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 10/47 (21%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
VMR ALG + + DKD G+ + FL
Sbjct: 38 TVMR----------ALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Score = 39.6 bits (93), Expect = 7e-04
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 10/47 (21%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
VMR ALG + + DKD G+ + FL
Sbjct: 38 TVMR----------ALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Score = 39.6 bits (93), Expect = 7e-04
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 10/47 (21%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
VMR ALG + + DKD G+ + FL
Sbjct: 38 TVMR----------ALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Score = 34.5 bits (80), Expect = 0.034
Identities = 9/47 (19%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ F + D D + + EL ++R+L T +++E++
Sbjct: 16 YKEAFQLFDKDNDNKLTAEELGTVMRALGAN-----PTKQKISEIVK 57
Score = 32.6 bits (75), Expect = 0.16
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ F + D D + + EL ++R+L
Sbjct: 16 YKEAFQLFDKDNDNKLTAEELGTVMRAL 43
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H)
reductase, flavoproteins, electron transfer,
oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter
capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Length = 272
Score = 49.8 bits (119), Expect = 4e-06
Identities = 20/131 (15%), Positives = 43/131 (32%), Gaps = 14/131 (10%)
Query: 1736 ILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKN-AAYHSFTLTSAPHENFLSCH 1794
+ + R RP + SG++V + ++++ S + L +
Sbjct: 21 VTSVRHWTDTLFSFRVTRPQTLRFRSGEFVMIGLLDDNGKPIMRAYSIASPAWDEELEFY 80
Query: 1795 IKA--QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGN--QDWYKFEVAVMVGGGIG 1850
GP T +L + + +I L G + + G G
Sbjct: 81 SIKVPDGPLTSRL--------QHIKVGE-QIILRPKPVGTLVIDALLPGKRLWFLATGTG 131
Query: 1851 VTPYASILNDL 1861
+ P+AS++ +
Sbjct: 132 IAPFASLMREP 142
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein;
1.90A {Homo sapiens}
Length = 107
Score = 46.6 bits (111), Expect = 4e-06
Identities = 23/92 (25%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
Query: 1392 QEFLDTVVLFSRGHTEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1448
++FLD S K + + D + NG ID L ML L T
Sbjct: 13 KQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVP-----KTH 67
Query: 1449 SQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
++ +LI + S + +Y DF MM
Sbjct: 68 LELKKLI----GEVSSGSGETFSYPDFLRMML 95
Score = 42.7 bits (101), Expect = 7e-05
Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ + D +G+G I +L G T +L+ + + +
Sbjct: 35 KEKYMEFDLNGNGDIDIMSL--KRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
Query: 131 MLR 133
M+
Sbjct: 93 MML 95
Score = 42.7 bits (101), Expect = 7e-05
Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ + D +G+G I +L G T +L+ + + +
Sbjct: 35 KEKYMEFDLNGNGDIDIMSL--KRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
Query: 1274 MLR 1276
M+
Sbjct: 93 MML 95
Score = 42.7 bits (101), Expect = 7e-05
Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1432
+ + D +G+G I +L G T +L+ + + +
Sbjct: 35 KEKYMEFDLNGNGDIDIMSL--KRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
Query: 1433 MLR 1435
M+
Sbjct: 93 MML 95
Score = 39.7 bits (93), Expect = 0.001
Identities = 17/68 (25%), Positives = 25/68 (36%), Gaps = 8/68 (11%)
Query: 1233 QEFLDTVVLFSRGHTEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTD 1289
++FLD S K + + D + NG ID L ML L T
Sbjct: 13 KQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVP-----KTH 67
Query: 1290 SQVTELID 1297
++ +LI
Sbjct: 68 LELKKLIG 75
Score = 38.5 bits (90), Expect = 0.003
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
LG+ + ++ + V S+ +FL
Sbjct: 60 KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
Score = 38.5 bits (90), Expect = 0.003
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
LG+ + ++ + V S+ +FL
Sbjct: 60 KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
Score = 38.5 bits (90), Expect = 0.003
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
LG+ + ++ + V S+ +FL
Sbjct: 60 KLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92
Score = 38.1 bits (89), Expect = 0.004
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Query: 90 QEFLDTVVLFSRGHTEDK---LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
++FLD S K + + D + NG ID L ML L
Sbjct: 13 KQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKL 61
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding
protein, metal binding protein; NMR {Branchiostoma
lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Length = 81
Score = 45.6 bits (109), Expect = 4e-06
Identities = 18/80 (22%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
E+++ F + D + +GVID E +++ + E LTD++V E + +A D
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGE----EPLTDAEVEEAMK----EADED 57
Query: 1466 SKDFLTYQDFKLMMRDYKGD 1485
+ +F +++ K
Sbjct: 58 GNGVIDIPEFMDLIKKSKNA 77
Score = 42.9 bits (102), Expect = 3e-05
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGELA 1272
F + D +GDG I F EF ++ G T+ ++ D D NGVID E
Sbjct: 11 LRAFKVFDANGDGVIDFDEF--KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 1273 EMLRSLVEMARTTSLTD 1289
++ + ++ +
Sbjct: 69 DL------IKKSKNALK 79
Score = 42.9 bits (102), Expect = 3e-05
Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGELA 1431
F + D +GDG I F EF ++ G T+ ++ D D NGVID E
Sbjct: 11 LRAFKVFDANGDGVIDFDEF--KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 1432 EMLRSLVEMARTTSLTD 1448
++ + ++ +
Sbjct: 69 DL------IKKSKNALK 79
Score = 42.5 bits (101), Expect = 4e-05
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH---TEDKLRIIFDMCDNDRNGVIDKGELA 129
F + D +GDG I F EF ++ G T+ ++ D D NGVID E
Sbjct: 11 LRAFKVFDANGDGVIDFDEF--KFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 130 EMLRS 134
++++
Sbjct: 69 DLIKK 73
Score = 39.8 bits (94), Expect = 5e-04
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
E+++ F + D + +GVID E +++ + E LTD++V E +
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGE----EPLTDAEVEEAMK 52
Score = 37.5 bits (88), Expect = 0.003
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 55 SRAEFASA---LGMK--SDAVFVRMMFNIVDKDGDGRISFQEFL 93
EF +G + +DA V D+DG+G I EF+
Sbjct: 26 DFDEFKFIMQKVGEEPLTDA-EVEEAMKEADEDGNGVIDIPEFM 68
Score = 37.5 bits (88), Expect = 0.003
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 1198 SRAEFASA---LGMK--SDAVFVRMMFNIVDKDGDGRISFQEFL 1236
EF +G + +DA V D+DG+G I EF+
Sbjct: 26 DFDEFKFIMQKVGEEPLTDA-EVEEAMKEADEDGNGVIDIPEFM 68
Score = 37.5 bits (88), Expect = 0.003
Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 6/44 (13%)
Query: 1357 SRAEFASA---LGMK--SDAVFVRMMFNIVDKDGDGRISFQEFL 1395
EF +G + +DA V D+DG+G I EF+
Sbjct: 26 DFDEFKFIMQKVGEEPLTDA-EVEEAMKEADEDGNGVIDIPEFM 68
Score = 35.2 bits (82), Expect = 0.022
Identities = 10/38 (26%), Positives = 20/38 (52%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMART 141
E+++ F + D + +GVID E +++ + E T
Sbjct: 6 DEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLT 43
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand,
cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Length = 78
Score = 45.3 bits (108), Expect = 5e-06
Identities = 16/79 (20%), Positives = 28/79 (35%), Gaps = 10/79 (12%)
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDS 1466
D + IF D + +G I EL + LR+L + + + M + D
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGSTS----------ADEVQRMMAEIDTDG 51
Query: 1467 KDFLTYQDFKLMMRDYKGD 1485
F+ + +F G
Sbjct: 52 DGFIDFNEFISFCNANPGL 70
Score = 42.6 bits (101), Expect = 5e-05
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+F D +GDG+IS E T L + G + D+++ + D D +G ID E
Sbjct: 6 ERIFKRFDTNGDGKISLSEL--TDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 132 LRS 134
+
Sbjct: 64 CNA 66
Score = 42.6 bits (101), Expect = 5e-05
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+F D +GDG+IS E T L + G + D+++ + D D +G ID E
Sbjct: 6 ERIFKRFDTNGDGKISLSEL--TDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 1275 LRS 1277
+
Sbjct: 64 CNA 66
Score = 42.6 bits (101), Expect = 5e-05
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH-TEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+F D +GDG+IS E T L + G + D+++ + D D +G ID E
Sbjct: 6 ERIFKRFDTNGDGKISLSEL--TDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 1434 LRS 1436
+
Sbjct: 64 CNA 66
Score = 41.8 bits (99), Expect = 9e-05
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
S +E A LG S V+ M +D DGDG I F EF+
Sbjct: 21 SLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 62
Score = 41.8 bits (99), Expect = 9e-05
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
S +E A LG S V+ M +D DGDG I F EF+
Sbjct: 21 SLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 62
Score = 41.8 bits (99), Expect = 9e-05
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 1357 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
S +E A LG S V+ M +D DGDG I F EF+
Sbjct: 21 SLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFIS 62
Score = 36.4 bits (85), Expect = 0.007
Identities = 17/81 (20%), Positives = 27/81 (33%), Gaps = 15/81 (18%)
Query: 1248 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELI-------DGM- 1299
D + IF D + +G I EL + LR+L + +V ++ DG
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTLGST------SADEVQRMMAEIDTDGDGFI 55
Query: 1300 -FQSPRELMLAKAETRERRQK 1319
F A + K
Sbjct: 56 DFNEFISFCNANPGLMKDVAK 76
Score = 35.2 bits (82), Expect = 0.018
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 105 EDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
D + IF D + +G I EL + LR+L
Sbjct: 2 ADDMERIFKRFDTNGDGKISLSELTDALRTL 32
>2joj_A Centrin protein; N-terminal domain, centrin solution structure,
EF-hand calcium binding protein, cell cycle; NMR
{Euplotes octocarinatus}
Length = 77
Score = 45.2 bits (108), Expect = 5e-06
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
+ F++ D + G I + E V + + G + ++ + + D + NG I + L
Sbjct: 10 KEAFDLFDTNKTGSIDYHEL--KVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Query: 130 EMLRSLVE 137
M +
Sbjct: 68 IMTEKIKN 75
Score = 45.2 bits (108), Expect = 5e-06
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 1272
+ F++ D + G I + E V + + G + ++ + + D + NG I + L
Sbjct: 10 KEAFDLFDTNKTGSIDYHEL--KVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Query: 1273 EMLRSLVE 1280
M +
Sbjct: 68 IMTEKIKN 75
Score = 45.2 bits (108), Expect = 5e-06
Identities = 13/68 (19%), Positives = 28/68 (41%), Gaps = 5/68 (7%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 1431
+ F++ D + G I + E V + + G + ++ + + D + NG I + L
Sbjct: 10 KEAFDLFDTNKTGSIDYHEL--KVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Query: 1432 EMLRSLVE 1439
M +
Sbjct: 68 IMTEKIKN 75
Score = 41.7 bits (99), Expect = 9e-05
Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 9/66 (13%)
Query: 1414 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQ 1473
FD+ D ++ G ID EL +R+L + ++ EL+ + + ++ +
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRALGFD-----VKKPEILELM----NEYDREGNGYIGFD 63
Query: 1474 DFKLMM 1479
DF +M
Sbjct: 64 DFLDIM 69
Score = 38.6 bits (91), Expect = 0.001
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 10/47 (21%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
V MR ALG + + N D++G+G I F +FLD
Sbjct: 31 VAMR----------ALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Score = 38.6 bits (91), Expect = 0.001
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 10/47 (21%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
V MR ALG + + N D++G+G I F +FLD
Sbjct: 31 VAMR----------ALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Score = 38.6 bits (91), Expect = 0.001
Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 10/47 (21%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
V MR ALG + + N D++G+G I F +FLD
Sbjct: 31 VAMR----------ALGFDVKKPEILELMNEYDREGNGYIGFDDFLD 67
Score = 35.2 bits (82), Expect = 0.017
Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 5/43 (11%)
Query: 1255 FDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
FD+ D ++ G ID EL +R+L + ++ EL++
Sbjct: 13 FDLFDTNKTGSIDYHELKVAMRALGFD-----VKKPEILELMN 50
>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand
(helix-loop-helix) calcium binding protein, four-HEL
domain, protein engineering; HET: FME; 1.44A {Bos taurus}
SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A
4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A
1b1g_A 2bcb_A 1boc_A 1bod_A
Length = 76
Score = 44.1 bits (105), Expect = 1e-05
Identities = 13/77 (16%), Positives = 35/77 (45%), Gaps = 9/77 (11%)
Query: 1406 TEDKLRIIFDMCD--NDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG 1463
+ ++++ F++ I K EL ++++L SL +D M ++
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP-----SLLKGM--STLDEMIEEVD 55
Query: 1464 LDSKDFLTYQDFKLMMR 1480
+ +++++F +MM+
Sbjct: 56 KNGDGEVSFEEFLVMMK 72
Score = 40.7 bits (96), Expect = 2e-04
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Query: 40 RRDDETGEVVMRTSLSRAEF---ASALGMK--SDAVFVRMMFNIVDKDGDGRISFQEFL 93
++ + +S+ E LG + M VDK+GDG +SF+EFL
Sbjct: 16 AKEGDPN------QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Score = 40.7 bits (96), Expect = 2e-04
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Query: 1183 RRDDETGEVVMRTSLSRAEF---ASALGMK--SDAVFVRMMFNIVDKDGDGRISFQEFL 1236
++ + +S+ E LG + M VDK+GDG +SF+EFL
Sbjct: 16 AKEGDPN------QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Score = 40.7 bits (96), Expect = 2e-04
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 11/59 (18%)
Query: 1342 RRDDETGEVVMRTSLSRAEF---ASALGMK--SDAVFVRMMFNIVDKDGDGRISFQEFL 1395
++ + +S+ E LG + M VDK+GDG +SF+EFL
Sbjct: 16 AKEGDPN------QISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Score = 31.8 bits (73), Expect = 0.31
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 9/57 (15%)
Query: 1247 TEDKLRIIFDMCD--NDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQ 1301
+ ++++ F++ I K EL ++++L SL +D M +
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP-----SLLKGM--STLDEMIE 52
Score = 28.7 bits (65), Expect = 3.1
Identities = 6/36 (16%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Query: 104 TEDKLRIIFDMCD--NDRNGVIDKGELAEMLRSLVE 137
+ ++++ F++ I K EL ++++L
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGP 38
Score = 28.7 bits (65), Expect = 3.1
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 14/73 (19%)
Query: 1219 FNIVD-KDGD-GRISFQEFLDTVVLFSRGH----TEDKLRIIFDMCDNDRNGVIDKGELA 1272
F + K+GD +IS +E V+ + G L + + D + +G + E
Sbjct: 11 FEVFAAKEGDPNQISKEELKL--VMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Query: 1273 EMLRSLVEMARTT 1285
M M + +
Sbjct: 69 VM------MKKIS 75
Score = 28.7 bits (65), Expect = 3.1
Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 14/73 (19%)
Query: 1378 FNIVD-KDGD-GRISFQEFLDTVVLFSRGH----TEDKLRIIFDMCDNDRNGVIDKGELA 1431
F + K+GD +IS +E V+ + G L + + D + +G + E
Sbjct: 11 FEVFAAKEGDPNQISKEELKL--VMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Query: 1432 EMLRSLVEMARTT 1444
M M + +
Sbjct: 69 VM------MKKIS 75
Score = 28.7 bits (65), Expect = 3.3
Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 76 FNIVD-KDGD-GRISFQEFLDTVVLFSRGH----TEDKLRIIFDMCDNDRNGVIDKGELA 129
F + K+GD +IS +E V+ + G L + + D + +G + E
Sbjct: 11 FEVFAAKEGDPNQISKEELKL--VMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68
Query: 130 EMLRSLVE 137
M++ + +
Sbjct: 69 VMMKKISQ 76
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics,
national institute allergy and infectious diseases; HET:
FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Length = 271
Score = 47.5 bits (113), Expect = 2e-05
Identities = 20/137 (14%), Positives = 44/137 (32%), Gaps = 13/137 (9%)
Query: 1729 TKYMALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAFKNAAYHSFTLTSAPHE 1788
+K+ +L + R +++G++ + ++++ S +E
Sbjct: 17 SKFDTATVLSVHHWTDTLFSFTCTRDQALRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYE 76
Query: 1789 NFLSCHIKA--QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEV--AVM 1844
L GP T +L++ D + + G M
Sbjct: 77 EHLEFFSIKVQNGPLTSRLQH-------LKVGDP--VLIGKKPTGTLVADNLLPGKTLWM 127
Query: 1845 VGGGIGVTPYASILNDL 1861
+ G G+ P+ SI+ D
Sbjct: 128 LSTGTGLAPFMSIIRDP 144
>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin
crosslinking, ionized calciu binding adapter molecule 2,
metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B
2vtg_A
Length = 150
Score = 45.2 bits (107), Expect = 3e-05
Identities = 15/107 (14%), Positives = 34/107 (31%), Gaps = 15/107 (14%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++++ + + + + + D + G ID L M
Sbjct: 22 QERRLAEINREFLCDQKYSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRM 75
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMR 1480
+ L T ++ ++I + D ++Y+DF MM
Sbjct: 76 MEKLGV-----PKTHLEMKKMI----SEVTGGVSDTISYRDFVNMML 113
Score = 42.5 bits (100), Expect = 3e-04
Identities = 8/77 (10%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 1272
+ + D + +G I ++ G T +++ + + I + +
Sbjct: 53 KEKYMEFDLNNEGEIDLMSL--KRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVN 110
Query: 1273 EMLRSLVEMARTTSLTD 1289
ML + + + +
Sbjct: 111 MMLGKRSAVLKLVMMFE 127
Score = 42.1 bits (99), Expect = 3e-04
Identities = 7/63 (11%), Positives = 20/63 (31%), Gaps = 4/63 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ + D + +G I ++ G T +++ + + I +
Sbjct: 53 KEKYMEFDLNNEGEIDLMSL--KRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVN 110
Query: 131 MLR 133
M+
Sbjct: 111 MML 113
Score = 40.2 bits (94), Expect = 0.001
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 62 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTE-DKLRIIFDMCDNDRN 120
LG+ + ++ M + V IS+++F++ + + KL ++F+ N+ +
Sbjct: 78 KLGVPKTHLEMKKMISEVTGGVSDTISYRDFVN---MMLGKRSAVLKLVMMFEGKANESS 134
Score = 40.2 bits (94), Expect = 0.001
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 1205 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTE-DKLRIIFDMCDNDRN 1263
LG+ + ++ M + V IS+++F++ + + KL ++F+ N+ +
Sbjct: 78 KLGVPKTHLEMKKMISEVTGGVSDTISYRDFVN---MMLGKRSAVLKLVMMFEGKANESS 134
Score = 40.2 bits (94), Expect = 0.001
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Query: 1364 ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTE-DKLRIIFDMCDNDRN 1422
LG+ + ++ M + V IS+++F++ + + KL ++F+ N+ +
Sbjct: 78 KLGVPKTHLEMKKMISEVTGGVSDTISYRDFVN---MMLGKRSAVLKLVMMFEGKANESS 134
Score = 38.7 bits (90), Expect = 0.004
Identities = 9/82 (10%), Positives = 24/82 (29%), Gaps = 11/82 (13%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
++++ + + + + + D + G ID L M
Sbjct: 22 QERRLAEINREFLCDQKYSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRM 75
Query: 1275 LRSLVEMARTTSLTDSQVTELI 1296
+ L T ++ ++I
Sbjct: 76 MEKLGV-----PKTHLEMKKMI 92
Score = 37.9 bits (88), Expect = 0.008
Identities = 7/64 (10%), Positives = 18/64 (28%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
++++ + + + + + D + G ID L M
Sbjct: 22 QERRLAEINREFLCDQKYSDEENL------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRM 75
Query: 132 LRSL 135
+ L
Sbjct: 76 MEKL 79
>1tvc_A Methane monooxygenase component C, methane monooxygenase;
FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR
{Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Length = 250
Score = 46.1 bits (110), Expect = 5e-05
Identities = 25/176 (14%), Positives = 59/176 (33%), Gaps = 41/176 (23%)
Query: 1723 KVVSLRTKYMALDILETELLPSDVIKIRFYRPPN------FTYHSGQWVRLACTAFKNAA 1776
++ +++ + S+ ++ + P+ + GQ++ L
Sbjct: 2 RISFGEVGSFEAEVVGLNWVSSNTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPGTD--V 59
Query: 1777 YHSFTLTSAPHE-NFLSCHIKA--QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGN 1833
S++ + P+ L I+ +G ++ LRN +A Q + ++GP G
Sbjct: 60 SRSYSPANLPNPEGRLEFLIRVLPEGRFSDYLRN-------DARVGQ-VLSVKGPLG--- 108
Query: 1834 QDWYKFEV-------AVMVGGGIGVTPYASILNDLVFGTSTNRYSGVSCKKVYFLW 1882
F + V GG G+ P S++ + + + +
Sbjct: 109 ----VFGLKERGMAPRYFVAGGTGLAPVVSMVRQM-QEWTAPN-------ETRIYF 152
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand
calcium-binding protein; 1.75A {Gallus gallus} SCOP:
a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A
1npq_A 1trf_A
Length = 90
Score = 43.0 bits (102), Expect = 5e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 129
+ F++ D DG G IS +E V+ G T+++L I + D D +G ID E L
Sbjct: 23 KAAFDMFDADGGGDISTKEL--GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 130 EMLRSLVE 137
M+R + E
Sbjct: 81 MMVRQMKE 88
Score = 43.0 bits (102), Expect = 5e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 1272
+ F++ D DG G IS +E V+ G T+++L I + D D +G ID E L
Sbjct: 23 KAAFDMFDADGGGDISTKEL--GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 1273 EMLRSLVE 1280
M+R + E
Sbjct: 81 MMVRQMKE 88
Score = 43.0 bits (102), Expect = 5e-05
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGE-LA 1431
+ F++ D DG G IS +E V+ G T+++L I + D D +G ID E L
Sbjct: 23 KAAFDMFDADGGGDISTKEL--GTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 1432 EMLRSLVE 1439
M+R + E
Sbjct: 81 MMVRQMKE 88
Score = 41.8 bits (99), Expect = 1e-04
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 9/70 (12%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDF 1469
+ FDM D D G I EL ++R L + T + +D + ++ D
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQN-----PTKEE----LDAIIEEVDEDGSGT 72
Query: 1470 LTYQDFKLMM 1479
+ +++F +MM
Sbjct: 73 IDFEEFLVMM 82
Score = 38.7 bits (91), Expect = 0.001
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 10/47 (21%)
Query: 48 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 94
VMR LG + + VD+DG G I F+EFL
Sbjct: 44 TVMR----------MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 38.7 bits (91), Expect = 0.001
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 10/47 (21%)
Query: 1191 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1237
VMR LG + + VD+DG G I F+EFL
Sbjct: 44 TVMR----------MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 38.7 bits (91), Expect = 0.001
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 10/47 (21%)
Query: 1350 VVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD 1396
VMR LG + + VD+DG G I F+EFL
Sbjct: 44 TVMR----------MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Score = 37.2 bits (87), Expect = 0.004
Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ FDM D D G I EL ++R L + T ++ +I+
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRMLGQN-----PTKEELDAIIE 63
Score = 35.3 bits (82), Expect = 0.022
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ FDM D D G I EL ++R L
Sbjct: 22 FKAAFDMFDADGGGDISTKELGTVMRML 49
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein,
solution structure, backbone dynamic, structural
genomics; NMR {Homo sapiens}
Length = 71
Score = 41.3 bits (98), Expect = 1e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ E A LG + M D D DGR++++EF
Sbjct: 24 TVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Score = 41.3 bits (98), Expect = 1e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ E A LG + M D D DGR++++EF
Sbjct: 24 TVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Score = 41.3 bits (98), Expect = 1e-04
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 1357 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ E A LG + M D D DGR++++EF
Sbjct: 24 TVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Score = 40.6 bits (96), Expect = 2e-04
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+ L++ F D D +G I EL + L + L E +D M ++A +D
Sbjct: 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQ-----PLPQ----EELDAMIREADVD 54
Query: 1466 SKDFLTYQDFKLMMR 1480
+ Y++F M+
Sbjct: 55 QDGRVNYEEFARMLA 69
Score = 40.2 bits (95), Expect = 2e-04
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
++ F D+DGDG I+ E + G +++L + D D++G ++ E A
Sbjct: 9 QVAFRAFDQDGDGHITVDELRR--AMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 131 MLR 133
ML
Sbjct: 67 MLA 69
Score = 40.2 bits (95), Expect = 2e-04
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
++ F D+DGDG I+ E + G +++L + D D++G ++ E A
Sbjct: 9 QVAFRAFDQDGDGHITVDELRR--AMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 1274 MLR 1276
ML
Sbjct: 67 MLA 69
Score = 40.2 bits (95), Expect = 2e-04
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1432
++ F D+DGDG I+ E + G +++L + D D++G ++ E A
Sbjct: 9 QVAFRAFDQDGDGHITVDELRR--AMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 1433 MLR 1435
ML
Sbjct: 67 MLA 69
Score = 34.4 bits (80), Expect = 0.032
Identities = 11/51 (21%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
+ L++ F D D +G I EL + L + L ++ +I
Sbjct: 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQ-----PLPQEELDAMIR 49
Score = 29.8 bits (68), Expect = 1.3
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ L++ F D D +G I EL + L
Sbjct: 4 GLEDLQVAFRAFDQDGDGHITVDELRRAMAGL 35
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding
Pro; NMR {Glycine max}
Length = 92
Score = 41.8 bits (99), Expect = 1e-04
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 9/87 (10%)
Query: 1406 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
E++L+ F + D D+NG I EL ++ +L E LTD E ++ M ++A LD
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGE-----KLTD----EEVEQMIKEADLD 57
Query: 1466 SKDFLTYQDFKLMMRDYKGDFVAIGLD 1492
+ Y++F MM +G G
Sbjct: 58 GDGQVNYEEFVKMMMTVRGGGGGNGWS 84
Score = 41.0 bits (97), Expect = 2e-04
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 1216 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1273
+ F + DKD +G IS E V+ + G T++++ + D D +G ++ E +
Sbjct: 12 KEAFKVFDKDQNGYISASEL--RHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 1274 MLRSLVEMARTTS 1286
M+ ++
Sbjct: 70 MMMTVRGGGGGNG 82
Score = 41.0 bits (97), Expect = 2e-04
Identities = 16/73 (21%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 1375 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 1432
+ F + DKD +G IS E V+ + G T++++ + D D +G ++ E +
Sbjct: 12 KEAFKVFDKDQNGYISASEL--RHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 1433 MLRSLVEMARTTS 1445
M+ ++
Sbjct: 70 MMMTVRGGGGGNG 82
Score = 40.3 bits (95), Expect = 4e-04
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 73 RMMFNIVDKDGDGRISFQEFLDTVVLFSRGH--TEDKLRIIFDMCDNDRNGVIDKGELAE 130
+ F + DKD +G IS E V+ + G T++++ + D D +G ++ E +
Sbjct: 12 KEAFKVFDKDQNGYISASEL--RHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 131 MLRSLVEMART 141
M+ ++
Sbjct: 70 MMMTVRGGGGG 80
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 55 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD---TVVLFSRGHTEDKL 108
S +E LG K V M D DGDG+++++EF+ TV G+ +L
Sbjct: 27 SASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRL 86
Query: 109 RIIF 112
R F
Sbjct: 87 RRKF 90
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 1198 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD---TVVLFSRGHTEDKL 1251
S +E LG K V M D DGDG+++++EF+ TV G+ +L
Sbjct: 27 SASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRL 86
Query: 1252 RIIF 1255
R F
Sbjct: 87 RRKF 90
Score = 38.3 bits (90), Expect = 0.002
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 6/64 (9%)
Query: 1357 SRAEFASA---LGMKSDAVFVRMMFNIVDKDGDGRISFQEFLD---TVVLFSRGHTEDKL 1410
S +E LG K V M D DGDG+++++EF+ TV G+ +L
Sbjct: 27 SASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGGGNGWSRL 86
Query: 1411 RIIF 1414
R F
Sbjct: 87 RRKF 90
Score = 36.0 bits (84), Expect = 0.014
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 1247 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELID 1297
E++L+ F + D D+NG I EL ++ +L E LTD +V ++I
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGE-----KLTDEEVEQMIK 52
Score = 30.6 bits (70), Expect = 0.88
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 104 TEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
E++L+ F + D D+NG I EL ++ +L
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINL 38
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1;
phosphoric diester hydrolase, hydrolase, lipid
degradation, transducer; HET: I3P; 2.30A {Rattus
norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A
1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A
1qat_A
Length = 624
Score = 46.1 bits (108), Expect = 1e-04
Identities = 23/136 (16%), Positives = 51/136 (37%), Gaps = 13/136 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
+ DK+ D +++F+E D + + + R IF CD+ + ++ E+
Sbjct: 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETF 72
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMMRDYKGDFVAIGLDC 1493
+ L R ID F++A S + L+ + ++ + + A
Sbjct: 73 YKML--TQRAE----------IDRAFEEAA-GSAETLSVERLVTFLQHQQREEEAGPALA 119
Query: 1494 KGAKQNFLDTSTNVAR 1509
+ + + T A+
Sbjct: 120 LSLIERYEPSETAKAQ 135
Score = 44.9 bits (105), Expect = 3e-04
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
+ DK+ D +++F+E D + + + R IF CD+ + ++ E+
Sbjct: 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETF 72
Query: 132 LRSL 135
+ L
Sbjct: 73 YKML 76
Score = 44.9 bits (105), Expect = 3e-04
Identities = 13/64 (20%), Positives = 28/64 (43%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
+ DK+ D +++F+E D + + + R IF CD+ + ++ E+
Sbjct: 13 IHSCLRKADKNKDNKMNFKELKDFLKELNIQVDDGYARKIFRECDHSQTDSLEDEEIETF 72
Query: 1275 LRSL 1278
+ L
Sbjct: 73 YKML 76
Score = 36.8 bits (84), Expect = 0.093
Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 11/155 (7%)
Query: 1361 FASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK-LRIIFDMCDN 1419
F L ++ D + R +F D + +E F + T+ + F+
Sbjct: 36 FLKELNIQVDDGYARKIFRECDHSQTDSLEDEEI----ETFYKMLTQRAEIDRAFEEAAG 91
Query: 1420 DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDFKLMM 1479
+ + ++ L R + LI+ ++ +T F + +
Sbjct: 92 SAETL----SVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYL 147
Query: 1480 RDYKGDFVAIGLDCKGAKQNFLDTSTNVARMTSFN 1514
G+ A L + Q+ ++ +S N
Sbjct: 148 LSADGN--AFSLAHRRVYQDMDQPLSHYLVSSSHN 180
Score = 32.2 bits (72), Expect = 2.2
Identities = 15/104 (14%), Positives = 31/104 (29%), Gaps = 9/104 (8%)
Query: 1202 FASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK-LRIIFDMCDN 1260
F L ++ D + R +F D + +E F + T+ + F+
Sbjct: 36 FLKELNIQVDDGYARKIFRECDHSQTDSLEDEEI----ETFYKMLTQRAEIDRAFEEAAG 91
Query: 1261 DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPR 1304
+ + ++ L R + LI+ S
Sbjct: 92 SAETL----SVERLVTFLQHQQREEEAGPALALSLIERYEPSET 131
Score = 31.8 bits (71), Expect = 2.6
Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 6/77 (7%)
Query: 59 FASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDK-LRIIFDMCDN 117
F L ++ D + R +F D + +E F + T+ + F+
Sbjct: 36 FLKELNIQVDDGYARKIFRECDHSQTDSLEDEEI----ETFYKMLTQRAEIDRAFEEAAG 91
Query: 118 DRNGVIDKGELAEMLRS 134
+ L L+
Sbjct: 92 SAE-TLSVERLVTFLQH 107
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron
transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP:
a.1.1.2 b.43.4.2 c.25.1.5
Length = 396
Score = 45.5 bits (108), Expect = 2e-04
Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 16/127 (12%)
Query: 1744 SDVIKIRFYRPPN----FTYHSGQW--VRLACTAFKNAAYHSFTLTSAPHENFLSCHIKA 1797
S +I P + Y GQ+ V L F + ++LT P +K
Sbjct: 164 SALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYRIAVKR 223
Query: 1798 --QGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVAVMVGGGIGVTPYA 1855
G + L N+ + D ++L P G ++ G+G TP
Sbjct: 224 EEGGQVSNWLHNHANV------GDV--VKLVAPAGDFFMAVADDTPVTLISAGVGQTPML 275
Query: 1856 SILNDLV 1862
++L+ L
Sbjct: 276 AMLDTLA 282
>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell
membrane, hydrolase, MEMB protease, thiol protease,
phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A
1df0_A 1u5i_A 1kfu_L 1kfx_L
Length = 714
Score = 45.2 bits (106), Expect = 2e-04
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
++M +++D+DG G++ +EF +L+++ K + I+ D DR+G ++ E+ +
Sbjct: 577 CKIMVDMLDEDGSGKLGLKEF---YILWTKIQ---KYQKIYREIDVDRSGTMNSYEMRKA 630
Query: 132 LRSL 135
L
Sbjct: 631 LEEA 634
Score = 45.2 bits (106), Expect = 2e-04
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
++M +++D+DG G++ +EF +L+++ K + I+ D DR+G ++ E+ +
Sbjct: 577 CKIMVDMLDEDGSGKLGLKEF---YILWTKIQ---KYQKIYREIDVDRSGTMNSYEMRKA 630
Query: 1275 LRSL 1278
L
Sbjct: 631 LEEA 634
Score = 45.2 bits (106), Expect = 2e-04
Identities = 16/64 (25%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
++M +++D+DG G++ +EF +L+++ K + I+ D DR+G ++ E+ +
Sbjct: 577 CKIMVDMLDEDGSGKLGLKEF---YILWTKIQ---KYQKIYREIDVDRSGTMNSYEMRKA 630
Query: 1434 LRSL 1437
L
Sbjct: 631 LEEA 634
>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural
genomics, PSI-B protein structure initiative, NEW YORK
structural genomics consortium; 1.54A {Homo sapiens}
PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*
Length = 93
Score = 40.2 bits (94), Expect = 4e-04
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E S LG ++D + + + +D + D + FQE+
Sbjct: 36 ELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 76
Score = 40.2 bits (94), Expect = 4e-04
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E S LG ++D + + + +D + D + FQE+
Sbjct: 36 ELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 76
Score = 40.2 bits (94), Expect = 4e-04
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E S LG ++D + + + +D + D + FQE+
Sbjct: 36 ELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 76
>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II,
calcium/phospholipid binding protein,
calcium-phospholipid protein complex; 2.25A {Homo
sapiens} SCOP: a.39.1.2 PDB: 1bt6_A
Length = 96
Score = 40.2 bits (94), Expect = 5e-04
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L EF L + D + V + +D+ DG++ FQ F
Sbjct: 32 VLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFF 72
Score = 40.2 bits (94), Expect = 5e-04
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L EF L + D + V + +D+ DG++ FQ F
Sbjct: 32 VLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFF 72
Score = 40.2 bits (94), Expect = 5e-04
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L EF L + D + V + +D+ DG++ FQ F
Sbjct: 32 VLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFF 72
>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100
family, EF-hand protein, complex (ligand/annexin),
ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2
PDB: 1nsh_A
Length = 99
Score = 40.2 bits (94), Expect = 6e-04
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
E A+ + D + M +D D DG++ FQEFL
Sbjct: 40 FMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
Score = 40.2 bits (94), Expect = 6e-04
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
E A+ + D + M +D D DG++ FQEFL
Sbjct: 40 FMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
Score = 40.2 bits (94), Expect = 6e-04
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
E A+ + D + M +D D DG++ FQEFL
Sbjct: 40 FMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFL 79
>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer,
X-type four-helix bundle, metal binding protein; NMR
{Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A
2kbm_A 2l0p_A 2jpt_A
Length = 93
Score = 39.8 bits (93), Expect = 6e-04
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L + E +S L ++ DA V + +D++GDG + FQEF+
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
Score = 39.8 bits (93), Expect = 6e-04
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L + E +S L ++ DA V + +D++GDG + FQEF+
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
Score = 39.8 bits (93), Expect = 6e-04
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L + E +S L ++ DA V + +D++GDG + FQEF+
Sbjct: 36 LLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFV 75
>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal
binding protein, binding protein; NMR {Homo sapiens}
PDB: 3c1v_A
Length = 113
Score = 39.9 bits (93), Expect = 8e-04
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E S LG ++D + + + +D + D + FQE+
Sbjct: 49 LLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 88
Score = 39.9 bits (93), Expect = 8e-04
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E S LG ++D + + + +D + D + FQE+
Sbjct: 49 LLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 88
Score = 39.9 bits (93), Expect = 8e-04
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E S LG ++D + + + +D + D + FQE+
Sbjct: 49 LLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 88
>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO,
EF-hand calcium binding proteins, S100 proteins,
protein dynamics, binding protein; 2.10A {Homo sapiens}
PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A
Length = 100
Score = 39.8 bits (93), Expect = 9e-04
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ + E L + + +D + DGRISF E+
Sbjct: 39 MLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
Score = 39.8 bits (93), Expect = 9e-04
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ + E L + + +D + DGRISF E+
Sbjct: 39 MLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
Score = 39.8 bits (93), Expect = 9e-04
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ + E L + + +D + DGRISF E+
Sbjct: 39 MLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78
>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100
proteins, EF-; 1.94A {Homo sapiens}
Length = 104
Score = 39.5 bits (92), Expect = 0.001
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 53 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E S LG ++D + + + +D + D + FQE+
Sbjct: 39 ELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 79
Score = 39.5 bits (92), Expect = 0.001
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1196 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E S LG ++D + + + +D + D + FQE+
Sbjct: 39 ELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 79
Score = 39.5 bits (92), Expect = 0.001
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 1355 SLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E S LG ++D + + + +D + D + FQE+
Sbjct: 39 ELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYC 79
>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand,
cytosolic, calcium, coiled coil, disease mutation,
glycoprotein, ION transport; NMR {Homo sapiens} PDB:
2kle_A 2kq6_A 2y4q_A
Length = 123
Score = 40.0 bits (93), Expect = 0.001
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 79 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 135
+ G G+++F E L +GHT+ ++ IF D D + + + E +M L
Sbjct: 55 SLRQGGGKLNFDELRQD--LKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109
Score = 40.0 bits (93), Expect = 0.001
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 1222 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1278
+ G G+++F E L +GHT+ ++ IF D D + + + E +M L
Sbjct: 55 SLRQGGGKLNFDELRQD--LKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109
Score = 40.0 bits (93), Expect = 0.001
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 1381 VDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSL 1437
+ G G+++F E L +GHT+ ++ IF D D + + + E +M L
Sbjct: 55 SLRQGGGKLNFDELRQD--LKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDL 109
>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP:
a.39.1.1
Length = 78
Score = 38.5 bits (90), Expect = 0.001
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 53 SLSRAEFASAL-----GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
LS+ E + + + +F +DK+GDG +SF+EF
Sbjct: 25 QLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQ 70
Score = 38.5 bits (90), Expect = 0.001
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 1196 SLSRAEFASAL-----GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
LS+ E + + + +F +DK+GDG +SF+EF
Sbjct: 25 QLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQ 70
Score = 38.5 bits (90), Expect = 0.001
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 1355 SLSRAEFASAL-----GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
LS+ E + + + +F +DK+GDG +SF+EF
Sbjct: 25 QLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQ 70
Score = 28.9 bits (65), Expect = 3.0
Identities = 11/74 (14%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 1408 DKLRIIFDMCDNDR--NGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLD 1465
+L+ IF+ + K EL +++++ + L + +D +FQ+ +
Sbjct: 7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEF----PSLLKGPRT---LDDLFQELDKN 59
Query: 1466 SKDFLTYQDFKLMM 1479
+++++F++++
Sbjct: 60 GDGEVSFEEFQVLV 73
>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein,
EF-hand, calcium regulation, oligomer neuronal
development, spine2; 2.03A {Danio rerio}
Length = 99
Score = 38.3 bits (89), Expect = 0.002
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 96
L AE L + D + V + N +D + D + F EF+ V
Sbjct: 37 LLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV 79
Score = 38.3 bits (89), Expect = 0.002
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1239
L AE L + D + V + N +D + D + F EF+ V
Sbjct: 37 LLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV 79
Score = 38.3 bits (89), Expect = 0.002
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
L AE L + D + V + N +D + D + F EF+ V
Sbjct: 37 LLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLV 79
>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response,
metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A*
2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A
Length = 95
Score = 38.2 bits (89), Expect = 0.002
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E A+ + D + +F +D + D ++ FQEF+
Sbjct: 39 LLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
Score = 38.2 bits (89), Expect = 0.002
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E A+ + D + +F +D + D ++ FQEF+
Sbjct: 39 LLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
Score = 38.2 bits (89), Expect = 0.002
Identities = 11/40 (27%), Positives = 20/40 (50%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E A+ + D + +F +D + D ++ FQEF+
Sbjct: 39 LLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78
>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP:
a.39.1.2 PDB: 1ozo_A
Length = 95
Score = 37.9 bits (88), Expect = 0.003
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E L D V + +D +GD ++ F EF+
Sbjct: 36 LMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
Score = 37.9 bits (88), Expect = 0.003
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E L D V + +D +GD ++ F EF+
Sbjct: 36 LMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
Score = 37.9 bits (88), Expect = 0.003
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E L D V + +D +GD ++ F EF+
Sbjct: 36 LMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75
>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium
free, signaling protein; HET: MSE; 1.15A {Homo sapiens}
SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A
1jwd_A 2cnp_A 2jtt_A
Length = 90
Score = 37.8 bits (88), Expect = 0.003
Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 51 RTSLSRAEFASAL------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+ +LS+ E + G K + + +D++ D ++FQE++
Sbjct: 26 KHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
Score = 37.8 bits (88), Expect = 0.003
Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 1194 RTSLSRAEFASAL------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+ +LS+ E + G K + + +D++ D ++FQE++
Sbjct: 26 KHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
Score = 37.8 bits (88), Expect = 0.003
Identities = 10/49 (20%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 1353 RTSLSRAEFASAL------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+ +LS+ E + G K + + +D++ D ++FQE++
Sbjct: 26 KHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74
>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding
protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A
1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X*
3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A*
3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...
Length = 92
Score = 37.5 bits (87), Expect = 0.004
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E + L + V + +D +GDG FQEF+
Sbjct: 36 LINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
Score = 37.5 bits (87), Expect = 0.004
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E + L + V + +D +GDG FQEF+
Sbjct: 36 LINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
Score = 37.5 bits (87), Expect = 0.004
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E + L + V + +D +GDG FQEF+
Sbjct: 36 LINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit;
alpha-beta-alpha sandwich, structural genomics, PSI-2;
HET: FAD; 2.95A {Porphyromonas gingivalis}
Length = 290
Score = 40.3 bits (94), Expect = 0.004
Identities = 32/194 (16%), Positives = 72/194 (37%), Gaps = 28/194 (14%)
Query: 1731 YMALDILETELLPSDVIKIRFYRPPNFTYHSGQWVRLACTAF-KNAAYHSFTLTSAPHE- 1788
Y + I + + +D + F + + T + ++++ + P E
Sbjct: 44 YAQIKIPKYNIRYAD-----YDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAEG 98
Query: 1789 NFLSCHIKAQGPWTWKLRNYFDPCN---------FNASEDQPKIRLEGPFGGGNQDWYKF 1839
N ++ +++ P + N + F+ K+ + GP+G +
Sbjct: 99 NIITLNVRIATPPFDRAANKWKAGIKPGISSSYIFSLKPGD-KVMMSGPYGDFHIQDTDA 157
Query: 1840 EVAVMVGGGIGVTPYASILNDLVFGTSTNR-----YSGVSCKKVYFL----WICPSHKHF 1890
E+ + +GGG G+ P + + L T R Y S ++++ I +F
Sbjct: 158 EM-LYIGGGAGMAPLRAQILHLFRTLKTGRKVSYWYGARSKNEIFYEEDFREIEREFPNF 216
Query: 1891 EWFIDVLRDVEKKD 1904
++ I L D + +D
Sbjct: 217 KFHI-ALSDPQPED 229
>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding
protein; NMR {Homo sapiens} SCOP: a.39.1.7
Length = 103
Score = 37.6 bits (87), Expect = 0.005
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 16/87 (18%)
Query: 64 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-----LFSRGHTEDKLRI-------- 110
G+ + + F + D + DG + QE ++ + ED +R
Sbjct: 14 GLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73
Query: 111 ---IFDMCDNDRNGVIDKGELAEMLRS 134
+ D +++ ++ E +
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLASTQR 100
Score = 37.6 bits (87), Expect = 0.005
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 16/87 (18%)
Query: 1207 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-----LFSRGHTEDKLRI-------- 1253
G+ + + F + D + DG + QE ++ + ED +R
Sbjct: 14 GLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73
Query: 1254 ---IFDMCDNDRNGVIDKGELAEMLRS 1277
+ D +++ ++ E +
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLASTQR 100
Score = 37.6 bits (87), Expect = 0.005
Identities = 12/87 (13%), Positives = 29/87 (33%), Gaps = 16/87 (18%)
Query: 1366 GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-----LFSRGHTEDKLRI-------- 1412
G+ + + F + D + DG + QE ++ + ED +R
Sbjct: 14 GLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73
Query: 1413 ---IFDMCDNDRNGVIDKGELAEMLRS 1436
+ D +++ ++ E +
Sbjct: 74 REHVMKNVDTNQDRLVTLEEFLASTQR 100
Score = 36.1 bits (83), Expect = 0.019
Identities = 19/148 (12%), Positives = 36/148 (24%), Gaps = 71/148 (47%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQSPRELMLAK 1310
+ F + D + +GV+D+ EL + +E + +
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMR----------------- 64
Query: 1311 AETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSD 1370
E E R + EH +
Sbjct: 65 -EMEEERLRMREHVMKN------------------------------------------- 80
Query: 1371 AVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
VD + D ++ +EFL +
Sbjct: 81 ----------VDTNQDRLVTLEEFLAST 98
Score = 34.5 bits (79), Expect = 0.050
Identities = 12/84 (14%), Positives = 34/84 (40%), Gaps = 9/84 (10%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTE-------LIDGMFQDA 1462
+ F + D + +GV+D+ EL + +E + + E + + + ++
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNV 81
Query: 1463 GLDSKDFLTYQDFKLMMRDYKGDF 1486
+ +T ++F + + +F
Sbjct: 82 DTNQDRLVTLEEFLASTQ--RKEF 103
Score = 31.4 bits (71), Expect = 0.81
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLRSLVEM 138
+ F + D + +GV+D+ EL + +E
Sbjct: 22 PKTFFILHDINSDGVLDEQELEALFTKELEK 52
>3n22_A Protein S100-A2; EF-hand, calcium-binding, zinc-binding, tumor
supressor, CAL binding protein; 1.30A {Homo sapiens}
PDB: 2rgi_A 4duq_A
Length = 98
Score = 37.1 bits (86), Expect = 0.006
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L E S +G K D ++ + +D++ D ++ FQE+
Sbjct: 38 LLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYA 77
Score = 37.1 bits (86), Expect = 0.006
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L E S +G K D ++ + +D++ D ++ FQE+
Sbjct: 38 LLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYA 77
Score = 37.1 bits (86), Expect = 0.006
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L E S +G K D ++ + +D++ D ++ FQE+
Sbjct: 38 LLHKELPSFVGEKVDEEGLKKLMGSLDENSDQQVDFQEYA 77
>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein;
2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A
2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A
Length = 106
Score = 37.1 bits (86), Expect = 0.007
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 53 SLSRAEFASAL-----GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 96
SLS EF + + D + +D + D + F E+ +
Sbjct: 40 SLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLI 88
Score = 37.1 bits (86), Expect = 0.007
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 1196 SLSRAEFASAL-----GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1239
SLS EF + + D + +D + D + F E+ +
Sbjct: 40 SLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLI 88
Score = 37.1 bits (86), Expect = 0.007
Identities = 10/49 (20%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Query: 1355 SLSRAEFASAL-----GMKSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
SLS EF + + D + +D + D + F E+ +
Sbjct: 40 SLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLI 88
>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2,
protein structure initiative, northeast structural
genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A
Length = 121
Score = 37.1 bits (86), Expect = 0.009
Identities = 12/71 (16%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 133
F+ + G I+ + + F + G + L I+ + D + +G +D+ E + ++
Sbjct: 38 QFHSLK-PISGFITGDQARN---FFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMK 93
Query: 134 SLVEMARTSFP 144
L+++ +
Sbjct: 94 -LIKLKLQGYQ 103
Score = 36.7 bits (85), Expect = 0.014
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1276
F+ + G I+ + + F + G + L I+ + D + +G +D+ E + ++
Sbjct: 38 QFHSLK-PISGFITGDQARN---FFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMK 93
Query: 1277 SLVEMAR 1283
L+++
Sbjct: 94 -LIKLKL 99
Score = 36.7 bits (85), Expect = 0.014
Identities = 12/67 (17%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSR-GHTEDKLRIIFDMCDNDRNGVIDKGELAEMLR 1435
F+ + G I+ + + F + G + L I+ + D + +G +D+ E + ++
Sbjct: 38 QFHSLK-PISGFITGDQARN---FFFQSGLPQPVLAQIWALADMNNDGRMDQVEFSIAMK 93
Query: 1436 SLVEMAR 1442
L+++
Sbjct: 94 -LIKLKL 99
Score = 31.7 bits (72), Expect = 0.70
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 14/70 (20%)
Query: 24 REAYALTF-GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 82
R + F LKP D+ ++ L + + ++ + D +
Sbjct: 32 RAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPV-------------LAQIWALADMN 78
Query: 83 GDGRISFQEF 92
DGR+ EF
Sbjct: 79 NDGRMDQVEF 88
Score = 31.7 bits (72), Expect = 0.70
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 14/70 (20%)
Query: 1167 REAYALTF-GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1225
R + F LKP D+ ++ L + + ++ + D +
Sbjct: 32 RAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPV-------------LAQIWALADMN 78
Query: 1226 GDGRISFQEF 1235
DGR+ EF
Sbjct: 79 NDGRMDQVEF 88
Score = 31.7 bits (72), Expect = 0.70
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 14/70 (20%)
Query: 1326 REAYALTF-GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1384
R + F LKP D+ ++ L + + ++ + D +
Sbjct: 32 RAKHDQQFHSLKPISGFITGDQARNFFFQSGLPQPV-------------LAQIWALADMN 78
Query: 1385 GDGRISFQEF 1394
DGR+ EF
Sbjct: 79 NDGRMDQVEF 88
>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding
protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A
3nsl_A
Length = 101
Score = 36.8 bits (85), Expect = 0.010
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 54 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
L + E A+ + +++D + D + F E++
Sbjct: 37 LLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
Score = 36.8 bits (85), Expect = 0.010
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 1197 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
L + E A+ + +++D + D + F E++
Sbjct: 37 LLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
Score = 36.8 bits (85), Expect = 0.010
Identities = 7/40 (17%), Positives = 17/40 (42%)
Query: 1356 LSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
L + E A+ + +++D + D + F E++
Sbjct: 37 LLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76
>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1irj_A*
Length = 113
Score = 36.8 bits (85), Expect = 0.011
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 51 RTSLSRAEFASAL---------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+L++ EF + + + + +D + D ++SF+EF+
Sbjct: 28 PDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
Score = 36.8 bits (85), Expect = 0.011
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 1194 RTSLSRAEFASAL---------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+L++ EF + + + + +D + D ++SF+EF+
Sbjct: 28 PDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
Score = 36.8 bits (85), Expect = 0.011
Identities = 9/52 (17%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 1353 RTSLSRAEFASAL---------GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+L++ EF + + + + +D + D ++SF+EF+
Sbjct: 28 PDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79
>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH
domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A
1f8h_A 1ff1_A
Length = 106
Score = 36.3 bits (84), Expect = 0.013
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 75 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+F+ + +G +S + V+L S+ + L ++++ D D +G++D+ E A +
Sbjct: 20 IFDSLS-PVNGFLSGDKVKP-VLLNSKLPVDI-LGRVWELSDIDHDGMLDRDEFAVAMF- 75
Query: 135 LVEMARTSFP 144
LV A P
Sbjct: 76 LVYCALEKEP 85
Score = 35.9 bits (83), Expect = 0.018
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 1218 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+F+ + +G +S + V+L S+ + L ++++ D D +G++D+ E A +
Sbjct: 20 IFDSLS-PVNGFLSGDKVKP-VLLNSKLPVDI-LGRVWELSDIDHDGMLDRDEFAVAMF- 75
Query: 1278 LVEMAR 1283
LV A
Sbjct: 76 LVYCAL 81
Score = 35.9 bits (83), Expect = 0.018
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 1377 MFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+F+ + +G +S + V+L S+ + L ++++ D D +G++D+ E A +
Sbjct: 20 IFDSLS-PVNGFLSGDKVKP-VLLNSKLPVDI-LGRVWELSDIDHDGMLDRDEFAVAMF- 75
Query: 1437 LVEMAR 1442
LV A
Sbjct: 76 LVYCAL 81
Score = 30.5 bits (69), Expect = 1.7
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 14/70 (20%)
Query: 24 REAYALTF-GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 82
+ Y F L P D+ V++ + L ++ + D D
Sbjct: 14 KAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILG-------------RVWELSDID 60
Query: 83 GDGRISFQEF 92
DG + EF
Sbjct: 61 HDGMLDRDEF 70
Score = 30.5 bits (69), Expect = 1.7
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 14/70 (20%)
Query: 1167 REAYALTF-GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1225
+ Y F L P D+ V++ + L ++ + D D
Sbjct: 14 KAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILG-------------RVWELSDID 60
Query: 1226 GDGRISFQEF 1235
DG + EF
Sbjct: 61 HDGMLDRDEF 70
Score = 30.5 bits (69), Expect = 1.7
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 14/70 (20%)
Query: 1326 REAYALTF-GLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKD 1384
+ Y F L P D+ V++ + L ++ + D D
Sbjct: 14 KAKYDAIFDSLSPVNGFLSGDKVKPVLLNSKLPVDILG-------------RVWELSDID 60
Query: 1385 GDGRISFQEF 1394
DG + EF
Sbjct: 61 HDGMLDRDEF 70
>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium,
polymorphism, structural genomics, spine2, structural
proteomics in europe, spine; NMR {Homo sapiens} PDB:
2kay_A
Length = 92
Score = 35.5 bits (82), Expect = 0.018
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Query: 53 SLSRAEFASALGM-----KSDAVFVRMMFNIVDKDGDGRISFQEFL 93
+LSR E + + + + +DK+ D I F+E+
Sbjct: 28 TLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
Score = 35.5 bits (82), Expect = 0.018
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Query: 1196 SLSRAEFASALGM-----KSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
+LSR E + + + + +DK+ D I F+E+
Sbjct: 28 TLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
Score = 35.5 bits (82), Expect = 0.018
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 5/46 (10%)
Query: 1355 SLSRAEFASALGM-----KSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
+LSR E + + + + +DK+ D I F+E+
Sbjct: 28 TLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73
>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding
protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2
PDB: 1mr8_A
Length = 93
Score = 35.5 bits (82), Expect = 0.019
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 53 SLSRAEFASAL----GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
++ R + L + F +D + DG ++FQEFL
Sbjct: 28 AVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFL 72
Score = 35.5 bits (82), Expect = 0.019
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 1196 SLSRAEFASAL----GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1236
++ R + L + F +D + DG ++FQEFL
Sbjct: 28 AVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFL 72
Score = 35.5 bits (82), Expect = 0.019
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 1355 SLSRAEFASAL----GMKSDAVFVRMMFNIVDKDGDGRISFQEFL 1395
++ R + L + F +D + DG ++FQEFL
Sbjct: 28 AVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFL 72
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet,
helix-FLA five-stranded parallel beta sheet, lipid
binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus
necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A*
3ozv_B* 3ozw_A*
Length = 403
Score = 38.2 bits (89), Expect = 0.023
Identities = 26/142 (18%), Positives = 48/142 (33%), Gaps = 20/142 (14%)
Query: 1733 ALDILETELLPSDVIKIRFYRP---PNFTYHSGQ--WVRLACTAFKNAAYHSFTLTSAPH 1787
I E + P + GQ V + A ++L+ P+
Sbjct: 156 TFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPN 215
Query: 1788 ENFLSCHIK-------AQGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFE 1840
+K G + L ++ + DQ ++L P+G + D
Sbjct: 216 GRTYRISVKREGGGPQPPGYVSNLLHDHVNV------GDQ--VKLAAPYGSFHIDVDAKT 267
Query: 1841 VAVMVGGGIGVTPYASILNDLV 1862
V++ GG+G+TP S+L +
Sbjct: 268 PIVLISGGVGLTPMVSMLKVAL 289
>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100
protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2
PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A
Length = 100
Score = 35.1 bits (81), Expect = 0.030
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 53 SLSRAEFASALGM--KSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 96
++ + F + L K ++ +F DK+ D +I F EFL +
Sbjct: 33 TMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL 78
Score = 35.1 bits (81), Expect = 0.030
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 1196 SLSRAEFASALGM--KSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1239
++ + F + L K ++ +F DK+ D +I F EFL +
Sbjct: 33 TMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL 78
Score = 35.1 bits (81), Expect = 0.030
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 1355 SLSRAEFASALGM--KSDAVFVRMMFNIVDKDGDGRISFQEFLDTV 1398
++ + F + L K ++ +F DK+ D +I F EFL +
Sbjct: 33 TMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLL 78
Score = 29.7 bits (67), Expect = 2.8
Identities = 14/76 (18%), Positives = 29/76 (38%), Gaps = 4/76 (5%)
Query: 1406 TEDKLRIIFDMCDN--DRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAG 1463
E + + DM R+ IDK L M++ S D + T + +F+
Sbjct: 5 AERSIIGMIDMFHKYTRRDDKIDKPSLLTMMKE--NFPNFLSACDKKGTNYLADVFEKKD 62
Query: 1464 LDSKDFLTYQDFKLMM 1479
+ + + +F ++
Sbjct: 63 KNEDKKIDFSEFLSLL 78
>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like,
EF-hand, structural genomics, structural genomics CON
SGC, hydrolase; 1.80A {Homo sapiens}
Length = 174
Score = 36.5 bits (84), Expect = 0.035
Identities = 14/108 (12%), Positives = 40/108 (37%), Gaps = 14/108 (12%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1433
R + +++ +GR+ +EF + +F GV+ +L +
Sbjct: 48 CRSLVALMELKVNGRLDQEEFARLW------KRLVHYQHVFQKVQ-TSPGVLLSSDLWKA 100
Query: 1434 LRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQDF-KLMMR 1480
+ + + R ++ ++ L+ + D+ +++ +MR
Sbjct: 101 IENT-DFLRGIFISR-ELLHLVTLRYSDSVGR----VSFPSLVCFLMR 142
Score = 34.1 bits (78), Expect = 0.21
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Query: 72 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 131
R + +++ +GR+ +EF + +F GV+ +L +
Sbjct: 48 CRSLVALMELKVNGRLDQEEFARLW------KRLVHYQHVFQKVQ-TSPGVLLSSDLWKA 100
Query: 132 LR 133
+
Sbjct: 101 IE 102
Score = 34.1 bits (78), Expect = 0.21
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 7/62 (11%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEM 1274
R + +++ +GR+ +EF + +F GV+ +L +
Sbjct: 48 CRSLVALMELKVNGRLDQEEFARLW------KRLVHYQHVFQKVQ-TSPGVLLSSDLWKA 100
Query: 1275 LR 1276
+
Sbjct: 101 IE 102
Score = 29.5 bits (66), Expect = 8.1
Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 12/88 (13%)
Query: 39 RRRDDETGEVV---MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDT 95
++ G ++ + ++ +F G+ + ++ D GR+SF +
Sbjct: 83 QKVQTSPGVLLSSDLWKAIENTDFL--RGIFISRELLHLVTL-RYSDSVGRVSFPSLVCF 139
Query: 96 VVLFSRGHTEDKLRIIFDMCDNDRNGVI 123
++ + + F D G+
Sbjct: 140 LM------RLEAMAKTFRNLSKDGKGLY 161
Score = 29.5 bits (66), Expect = 8.1
Identities = 11/88 (12%), Positives = 30/88 (34%), Gaps = 12/88 (13%)
Query: 1182 RRRDDETGEVV---MRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDGDGRISFQEFLDT 1238
++ G ++ + ++ +F G+ + ++ D GR+SF +
Sbjct: 83 QKVQTSPGVLLSSDLWKAIENTDFL--RGIFISRELLHLVTL-RYSDSVGRVSFPSLVCF 139
Query: 1239 VVLFSRGHTEDKLRIIFDMCDNDRNGVI 1266
++ + + F D G+
Sbjct: 140 LM------RLEAMAKTFRNLSKDGKGLY 161
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme,
oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A
{Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Length = 270
Score = 36.7 bits (85), Expect = 0.057
Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 26/151 (17%)
Query: 1730 KYMALDILETELLPSDVIKIRFYRP---PNFTYHSGQWVRLACTAFKNAAYHSFTLTSAP 1786
+ ++ + L DV RF P G+ + + T ++T TS
Sbjct: 11 GRIHCRLVAKKELSRDVRLFRFSLPSPDQVLGLPIGKHIFVCATIEGKLCMRAYTPTSMV 70
Query: 1787 HEN-FLSCHIKAQGPWTW-------KLRNYFDPCNFNASEDQPKIRLEGPFG-------- 1830
E +K + Y D + I ++GP G
Sbjct: 71 DEIGHFDLLVKVYFKNEHPKFPNGGLMTQYLD----SLPVGS-YIDVKGPLGHVEYTGRG 125
Query: 1831 --GGNQDWYKFEVAVMVGGGIGVTPYASILN 1859
N M+ GG G+TP I+
Sbjct: 126 SFVINGKQRNARRLAMICGGSGITPMYQIIQ 156
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like
domain, actin binding protein, contractIle protein;
20.00A {Gallus gallus} SCOP: i.15.1.1
Length = 863
Score = 37.2 bits (85), Expect = 0.072
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 20/126 (15%)
Query: 1356 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKL 1410
+ +F + L +A F R+M +IVD + G ++FQ F+D + + T D++
Sbjct: 742 MDCEDFRACLISMGYNMGEAEFARIM-SIVDPNRMGVVTFQAFIDFMSRETADTDTADQV 800
Query: 1411 RIIFDMCDNDRNGVIDKGELAEMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSK-DF 1469
F + D+N + + LR L Q I M G D+
Sbjct: 801 MASFKILAGDKNYI-----TVDELRR--------ELPPDQAEYCIARMAPYNGRDAVPGA 847
Query: 1470 LTYQDF 1475
L Y F
Sbjct: 848 LDYMSF 853
Score = 34.1 bits (77), Expect = 0.57
Identities = 36/200 (18%), Positives = 75/200 (37%), Gaps = 31/200 (15%)
Query: 1115 DSLAARKKFMNKMEGFLNAMKKHLI-----IVQSPRELMLAKAETRE---RRQKKLEH-- 1164
S+ K ++++EG +++ LI + + + + R ++E+
Sbjct: 652 KSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQI 711
Query: 1165 FFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALG----MKSDAVFVRMMFN 1220
R+A ++ + + R + + +F + L +A F R+M +
Sbjct: 712 LTRDAKGIS--QEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIM-S 768
Query: 1221 IVDKDGDGRISFQEFLDTVV-LFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRSLV 1279
IVD + G ++FQ F+D + + T D++ F + D+N + + LR
Sbjct: 769 IVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDKNYI-----TVDELRR-- 821
Query: 1280 EMARTTSLTDSQVTELIDGM 1299
L Q I M
Sbjct: 822 ------ELPPDQAEYCIARM 835
Score = 32.2 bits (72), Expect = 2.1
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 54 LSRAEFASALG----MKSDAVFVRMMFNIVDKDGDGRISFQEFLDTVV-LFSRGHTEDKL 108
+ +F + L +A F R+M +IVD + G ++FQ F+D + + T D++
Sbjct: 742 MDCEDFRACLISMGYNMGEAEFARIM-SIVDPNRMGVVTFQAFIDFMSRETADTDTADQV 800
Query: 109 RIIFDMCDNDRNGVIDKGELAEML 132
F + D+N I EL L
Sbjct: 801 MASFKILAGDKN-YITVDELRREL 823
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta
7 linker; phosphorylation, cytosolic,
transferase-transferase inhibitor complex; HET: DB8;
3.55A {Homo sapiens}
Length = 444
Score = 33.8 bits (78), Expect = 0.66
Identities = 5/54 (9%), Positives = 14/54 (25%), Gaps = 1/54 (1%)
Query: 80 DKDGDGRISFQEFL-DTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 132
+ + F F + + + + D + I + + L
Sbjct: 355 LGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYL 408
Score = 33.8 bits (78), Expect = 0.66
Identities = 5/54 (9%), Positives = 14/54 (25%), Gaps = 1/54 (1%)
Query: 1223 DKDGDGRISFQEFL-DTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1275
+ + F F + + + + D + I + + L
Sbjct: 355 LGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYL 408
Score = 33.8 bits (78), Expect = 0.66
Identities = 5/54 (9%), Positives = 14/54 (25%), Gaps = 1/54 (1%)
Query: 1382 DKDGDGRISFQEFL-DTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEML 1434
+ + F F + + + + D + I + + L
Sbjct: 355 LGNLVEGLDFHRFYFENLWSRNSKPVHTTILNPHIHLMGDESACIAYIRITQYL 408
Score = 33.4 bits (77), Expect = 0.70
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 6/59 (10%)
Query: 76 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 134
+ D I++ T L + G + R+G ++ RS
Sbjct: 388 HIHLMGDESACIAYIRI--TQYLDAGGIPRTAQSEETR-VWHRRDGKW---QIVHFHRS 440
Score = 33.4 bits (77), Expect = 0.70
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 6/59 (10%)
Query: 1219 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1277
+ D I++ T L + G + R+G ++ RS
Sbjct: 388 HIHLMGDESACIAYIRI--TQYLDAGGIPRTAQSEETR-VWHRRDGKW---QIVHFHRS 440
Score = 33.4 bits (77), Expect = 0.70
Identities = 9/59 (15%), Positives = 17/59 (28%), Gaps = 6/59 (10%)
Query: 1378 FNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAEMLRS 1436
+ D I++ T L + G + R+G ++ RS
Sbjct: 388 HIHLMGDESACIAYIRI--TQYLDAGGIPRTAQSEETR-VWHRRDGKW---QIVHFHRS 440
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain,
NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum
polycephalum}
Length = 243
Score = 32.6 bits (75), Expect = 1.2
Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Query: 1729 TKYMALDILETELLPSDVIKIRFYRPPN---FTYHSGQWVRLACTAFKNAAYHSFTLTSA 1785
+Y + E +++ + RF GQ + + T Y +T S+
Sbjct: 9 NEYKKFMLREKQIINHNTRLFRFNLHHPEDVVGLPIGQHMSVKATVDGKEIYRPYTPVSS 68
Query: 1786 PHE-NFLSCHIK--AQGPWTWKLRNYFDPCNFNASEDQPKIRLEGPFGGGNQDWYKFEVA 1842
E + IK +G ++ Y D + N + +++ GP G + +
Sbjct: 69 DDEKGYFDLIIKVYEKG----QMSQYID--HLNPGD---FLQVRGPKGQFDYKPNMVKEM 119
Query: 1843 VMVGGGIGVTPYASILND 1860
M+ GG G+TP +
Sbjct: 120 GMIAGGTGITPMLQVARA 137
>1sra_A Sparc; extracellular matrix protein, calcium-binding protein; 2.00A
{Homo sapiens} SCOP: a.39.1.3
Length = 151
Score = 31.4 bits (70), Expect = 1.4
Identities = 28/146 (19%), Positives = 44/146 (30%), Gaps = 14/146 (9%)
Query: 1288 TDSQVTELIDGMFQSPRELMLAKAETRERRQKKLEHFFREAYALTFGLKPGEKRRRDDET 1347
DS++TE M + +++ E R + + + EKR +
Sbjct: 4 LDSELTEFPLRMRDWLKNVLVTLYE----RDEDNNLLTEKQKLRVKKIHENEKRLEAGDH 59
Query: 1348 GEVVMRTSLSRAEFASALGMKSDAVFVRMMFNIVDKDG-DGRISFQEFLDTVVLFSRGHT 1406
L +F M V F +D+ DG +S E
Sbjct: 60 -----PVELLARDFEKNYNMYIFPV--HWQFGQLDQHPIDGYLSHTELAPLRAPLIP--M 110
Query: 1407 EDKLRIIFDMCDNDRNGVIDKGELAE 1432
E F+ CD D + I E A
Sbjct: 111 EHCTTRFFETCDLDNDKYIALDEWAG 136
Score = 29.4 bits (65), Expect = 6.0
Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Query: 72 VRMMFNIVDKDG-DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 130
V F +D+ DG +S E E F+ CD D + I E A
Sbjct: 79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLIP--MEHCTTRFFETCDLDNDKYIALDEWAG 136
Score = 29.4 bits (65), Expect = 6.0
Identities = 15/60 (25%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Query: 1215 VRMMFNIVDKDG-DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELAE 1273
V F +D+ DG +S E E F+ CD D + I E A
Sbjct: 79 VHWQFGQLDQHPIDGYLSHTELAPLRAPLIP--MEHCTTRFFETCDLDNDKYIALDEWAG 136
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea,
helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16
c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Length = 1054
Score = 32.7 bits (75), Expect = 1.5
Identities = 11/35 (31%), Positives = 16/35 (45%), Gaps = 7/35 (20%)
Query: 1120 RKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKAET 1154
R ++ + E L +K L IV+SP KA
Sbjct: 492 RDRYRRRQEFDL--IKPALFIVESP-----TKARQ 519
>2bs2_C Quinol-fumarate reductase diheme cytochrome B subunit C; 2Fe-2S,
3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B;
HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP:
f.21.2.1 PDB: 1qlb_C* 1e7p_C* 2bs3_C* 2bs4_C*
Length = 256
Score = 32.0 bits (72), Expect = 1.5
Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 20/99 (20%)
Query: 1624 LHCLTAEVHFPSDYKPGITF--------------WLFQTITGITGVLLFVIMVLIFVFAH 1669
H A FP +Y+ +TF W Q +TG L + + I +
Sbjct: 92 AHAFLAMRKFPINYRQYLTFKTHKDLMRHGDTTLWWIQAMTGFAMFFLGSVHLYIMMTQP 151
Query: 1670 PTIRKKAY------NWFWLAHSLYVFLFALMLIHGLARI 1702
TI + W W + + +F L GL R+
Sbjct: 152 QTIGPVSSSFRMVSEWMWPLYLVLLFAVELHGSVGLYRL 190
>2ar5_A Phosphoinositide 3-kinase; PX domain, transferase; 1.80A {Homo
sapiens} PDB: 2rea_A 2red_A
Length = 121
Score = 30.6 bits (69), Expect = 1.7
Identities = 10/94 (10%), Positives = 33/94 (35%), Gaps = 15/94 (15%)
Query: 1083 VTIEESQPERGKKKHPMVLIRVHRDHDLVL--------EFDSLAARKKFMNKMEGFLNAM 1134
V++ + KH + ++R+ R+ + EF L + + +
Sbjct: 8 VSVFTYHKKYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSIIFPLWKLPGFP 67
Query: 1135 KKHLIIVQSPRELMLAKAETRERRQKKLEHFFRE 1168
+ ++ +++ +R+ +L + +
Sbjct: 68 NRMVLGRTHIKDVA-------AKRKIELNSYLQS 94
>3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic
vesicle, membrane, Ca structural protein; 7.94A {Bos
taurus}
Length = 190
Score = 31.7 bits (71), Expect = 1.8
Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 14/47 (29%)
Query: 1 QQSEQLDRRQLRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGE 47
Q+ E + R+ RE ++K+L+ +A + + E E
Sbjct: 82 QEPESI--RKWREEQRKRLQE--LDA----------ASKVMEQEWRE 114
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.1 bits (69), Expect = 2.1
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 9/33 (27%)
Query: 321 KRRALKMKQEELK-----NGPSKANLAV-GTVD 347
+++ALK Q LK + P+ LA+ T++
Sbjct: 18 EKQALKKLQASLKLYADDSAPA---LAIKATME 47
Score = 31.1 bits (69), Expect = 2.1
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 9/33 (27%)
Query: 1010 KRRALKMKQEELK-----NGPSKANLAV-GTVD 1036
+++ALK Q LK + P+ LA+ T++
Sbjct: 18 EKQALKKLQASLKLYADDSAPA---LAIKATME 47
>3m73_A Tellurite resistance protein TEHA homolog; anion channel, alpha
helical integral membrane protein, STRU genomics, PSI-2;
HET: BOG; 1.15A {Haemophilus influenzae} PDB: 3m75_A*
3m74_A* 3m77_A* 3m71_A* 3m7b_A* 3m7c_A* 3m7e_A* 3m7l_A*
3m78_A* 3m76_A* 3m72_A*
Length = 314
Score = 31.8 bits (72), Expect = 2.3
Identities = 13/190 (6%), Positives = 38/190 (20%), Gaps = 44/190 (23%)
Query: 1549 IFYVITIALFVERFIHY--SFLAEHTDLRHIMGQYIP-------------LDSHIQFHKI 1593
+++ I ++ + +Y AE+ + +I + ++
Sbjct: 50 AVWILFILMYAYKLRYYFEEVRAEYHS--PVRFSFIALIPITTMLVGDILYRWNPLIAEV 107
Query: 1594 AACTALFFSLIHTVGHIINFYHVSTQPLEHLHCLTAEVHFPSDYKPGITFWLFQTITGIT 1653
L+ + + + + H + +
Sbjct: 108 LIWIGTIGQLLFSTLRVSELWQGGVFEQKSTH----------------PSFYLPAVAAN- 150
Query: 1654 GVLLFVIMVLIFVFAHPTIRKKAYNWFWLAHSLYVFLFALM---LIHGLARITGPPRFWI 1710
A Y +F ++ ++ L I
Sbjct: 151 -------FTSASSLALLGYHDLGYLFFGAGMIAWIIFEPVLLQHLRISSLEPQFRATMGI 203
Query: 1711 YFIGPGVVFI 1720
V
Sbjct: 204 VLAPAFVCVS 213
>2wdq_D Succinate dehydrogenase hydrophobic membrane ANCH subunit; succinate
dehydrogenase activity, cell inner membrane, trica acid
cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB:
1nen_D* 2acz_D* 1nek_D* 2wdr_D* 2wdv_D* 2wp9_D* 2wu2_D*
2ws3_D* 2wu5_D*
Length = 115
Score = 29.8 bits (67), Expect = 2.9
Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 2/61 (3%)
Query: 1640 GITFWLFQTITGITGVLLFVIMVLIFVFAHPTIRKKAYNWF--WLAHSLYVFLFALMLIH 1697
G+ ++ T I L + MV F + + +F + +LIH
Sbjct: 12 GVHDFILVRATAIVLTLYIIYMVGFFATSGELTYEVWIGFFASAFTKVFTLLALFSILIH 71
Query: 1698 G 1698
Sbjct: 72 A 72
>2l5y_A Stromal interaction molecule 2; EF-hand, SAM domain, store OPE
calcium entry, signaling protein; NMR {Homo sapiens}
Length = 150
Score = 30.4 bits (68), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLR 133
L+ I D+D++G I+ E E +R
Sbjct: 17 LQTIHKQMDDDKDGGIEVEESDEFIR 42
Score = 30.4 bits (68), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLR 1276
L+ I D+D++G I+ E E +R
Sbjct: 17 LQTIHKQMDDDKDGGIEVEESDEFIR 42
Score = 30.4 bits (68), Expect = 3.6
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLR 1435
L+ I D+D++G I+ E E +R
Sbjct: 17 LQTIHKQMDDDKDGGIEVEESDEFIR 42
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer,
alpha-beta barrel, beta sandwich, FAD domain alpha/beta
NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis}
SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Length = 262
Score = 31.1 bits (71), Expect = 3.7
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 1822 KIRLEGPFGGG--NQDWYKFEVAVMVGGGIGVTP 1853
K+ + GP G G + + +++GGGIGV P
Sbjct: 91 KVDVMGPLGNGFPVAEVTSTDKILIIGGGIGVPP 124
>2b1e_A Exocyst complex component EXO70; tethering complex,
endocytosis/exocytosis complex; 2.00A {Saccharomyces
cerevisiae} PDB: 2b7m_A 2pfv_A
Length = 564
Score = 31.3 bits (70), Expect = 4.0
Identities = 5/66 (7%), Positives = 24/66 (36%), Gaps = 8/66 (12%)
Query: 87 ISFQEFLDTVVLFSRGHTEDKLRIIFDMCDN--------DRNGVIDKGELAEMLRSLVEM 138
++ + + R + E+ F++ ++ + + L + + + ++
Sbjct: 222 SAYAKLFGANLKIVRSNLENFGFFSFELVESINDVKKSLRGKELQNYNLLQDCTQEVRQV 281
Query: 139 ARTSFP 144
++ F
Sbjct: 282 TQSLFR 287
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of
allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio
cholerae o1 biovar el tor}
Length = 243
Score = 30.7 bits (70), Expect = 4.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 1843 VMVGGGIGVTPYASILNDLV 1862
V++ G+G TP +IL+ L
Sbjct: 118 VLISAGVGATPMQAILHTLA 137
>1nub_A Basement membrane protein BM-40; extracellular module,
glycoprotein, anti-adhesive protein, C binding,
site-directed mutagenesis; HET: NAG; 2.80A {Homo
sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A*
1bmo_A*
Length = 229
Score = 30.3 bits (67), Expect = 5.3
Identities = 14/106 (13%), Positives = 29/106 (27%), Gaps = 13/106 (12%)
Query: 1 QQSEQLDRRQLRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRT-------- 52
+R + +K + ++ + L+ G+ ++ +
Sbjct: 108 VLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPEKNYNMYIFPVHWQFGQLDQH 167
Query: 53 ----SLSRAEFAS-ALGMKSDAVFVRMMFNIVDKDGDGRISFQEFL 93
LS E A + F D D D I+ E+
Sbjct: 168 PIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWA 213
Score = 30.3 bits (67), Expect = 5.7
Identities = 6/22 (27%), Positives = 8/22 (36%)
Query: 1215 VRMMFNIVDKDGDGRISFQEFL 1236
F D D D I+ E+
Sbjct: 192 TTRFFETCDLDNDKYIALDEWA 213
Score = 30.3 bits (67), Expect = 5.7
Identities = 6/22 (27%), Positives = 8/22 (36%)
Query: 1374 VRMMFNIVDKDGDGRISFQEFL 1395
F D D D I+ E+
Sbjct: 192 TTRFFETCDLDNDKYIALDEWA 213
Score = 29.9 bits (66), Expect = 7.9
Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 4/122 (3%)
Query: 7 DRRQLRERRQKKLEHFFREAYALTFGLKPGEKRRRDDETGEVVMRTSLSRAEFASALGMK 66
+ + R + L++ Y ++++ L +
Sbjct: 93 ELTEFPLRMRDWLKNVLVTLYERDEDNNLLTEKQKLRVKKIHENEKRLEAGDHPEKNYNM 152
Query: 67 SDAVFVRMMFNIVDKDG-DGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDK 125
V F +D+ DG +S E + E F+ CD D + I
Sbjct: 153 YIFP-VHWQFGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIAL 209
Query: 126 GE 127
E
Sbjct: 210 DE 211
>2iwl_X Phosphatidylinositol-4-phosphate 3-kinase C2 domain-containing alpha
polypeptide; PI3K, PX domain, transferase; 2.6A {Homo
sapiens}
Length = 140
Score = 29.5 bits (66), Expect = 5.6
Identities = 10/94 (10%), Positives = 33/94 (35%), Gaps = 15/94 (15%)
Query: 1083 VTIEESQPERGKKKHPMVLIRVHRDHDLVL--------EFDSLAARKKFMNKMEGFLNAM 1134
V++ + KH + ++R+ R+ + EF L + + +
Sbjct: 23 VSVFTYHKKYNPDKHYIYVVRILREGQIEPSFVFRTFDEFQELHNKLSIIFPLWKLPGFP 82
Query: 1135 KKHLIIVQSPRELMLAKAETRERRQKKLEHFFRE 1168
+ ++ +++ +R+ +L + +
Sbjct: 83 NRMVLGRTHIKDVA-------AKRKIELNSYLQS 109
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold,
structural genomics, PSI-2, protein structure initiative;
2.30A {Pyrococcus furiosus}
Length = 142
Score = 29.6 bits (67), Expect = 5.9
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 1827 GPFGGGNQDWYKFEVAVMVGGGIGVTP 1853
GP G KF + +G G+
Sbjct: 7 GPLGTP-VPMEKFGKILAIGAYTGIVE 32
>1px5_A 2'-5'-oligoadenylate synthetase 1; 5-stranded antiparalel beta sheet,
four helix bundle, transferase; HET: YCM; 1.74A {Sus
scrofa} SCOP: a.160.1.2 d.218.1.6
Length = 349
Score = 30.6 bits (68), Expect = 6.1
Identities = 27/145 (18%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 1038 MAVREWLHANHKRFVKIRLGPETCLHT-----VDRKGEKLRTVNFKNCDTVTIEESQPER 1092
M +R + +F++ L P T T +D L+ F+ +
Sbjct: 1 MELRHTPARDLDKFIEDHLLPNTXFRTQVKEAIDIVXRFLKERCFQGTADPVRVSKVVKG 60
Query: 1093 GKKKHPMVLIRVHRDHDLVLEFDSLAARKKFMNKMEGFLNAMKKHLIIVQSPRELMLAKA 1152
G L R D DLV+ L + + + + F+ +++ L Q ++ +
Sbjct: 61 GSSGKGTTL-RGRSDADLVVFLTKLTSFEDQLRRRGEFIQEIRRQLEACQREQKFKVTFE 119
Query: 1153 ETRERRQKKLEHFFREAYALTFGLK 1177
RR+ AL+F L
Sbjct: 120 VQSPRREN--------PRALSFVLS 136
>1kf6_C Fumarate reductase 15 kDa hydrophobic protein; respiration, fumarate
reductace, succinate dehydrogenase, CO quinol, quinone,
oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia
coli} SCOP: f.21.2.2 PDB: 1kfy_C* 1l0v_C* 2b76_C* 3cir_C*
3p4p_C* 3p4q_C* 3p4r_C* 3p4s_C*
Length = 130
Score = 29.2 bits (65), Expect = 7.1
Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 19/116 (16%)
Query: 1670 PTIRKKAYNWFWLAHSLYVF------------LFALMLIHGLARITGPPRFW---IYFIG 1714
P +R W W Y F F++ LI GL + P W + F+
Sbjct: 6 PYVRPMTSTW-WKKLPFYRFYMLREGTAVPAVWFSIELIFGLFALKNGPEAWAGFVDFLQ 64
Query: 1715 PGVVFILDKVVSLRTKYMALDILETELLPSDV-IKIRFYRPPNFTYHSGQWVRLAC 1769
V+ I++ + EL P I ++ + W
Sbjct: 65 NPVIVIINLITLAAALLHTKTWF--ELAPKAANIIVKDEKMGPEPIIKSLWAVTVV 118
>2k60_A Protein (stromal interaction molecule 1); EF-hand, SAM domain,
EF-SAM, STIM1, store operated calcium entry regulator,
SOCE; NMR {Homo sapiens}
Length = 150
Score = 29.3 bits (65), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 108 LRIIFDMCDNDRNGVIDKGELAEMLR 133
+R I + D+D NG +D E E LR
Sbjct: 17 VRNIHKLMDDDANGDVDVEESDEFLR 42
Score = 29.3 bits (65), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 1251 LRIIFDMCDNDRNGVIDKGELAEMLR 1276
+R I + D+D NG +D E E LR
Sbjct: 17 VRNIHKLMDDDANGDVDVEESDEFLR 42
Score = 29.3 bits (65), Expect = 7.3
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 1410 LRIIFDMCDNDRNGVIDKGELAEMLR 1435
+R I + D+D NG +D E E LR
Sbjct: 17 VRNIHKLMDDDANGDVDVEESDEFLR 42
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor,
microtubles, motor protein; HET: ADP SPM; 2.81A
{Dictyostelium discoideum} PDB: 3vkh_A* 3vkh_C*
Length = 3245
Score = 30.6 bits (69), Expect = 7.7
Identities = 23/189 (12%), Positives = 57/189 (30%), Gaps = 16/189 (8%)
Query: 1005 KLQDRKRRALKMKQEELKNGPSKANLAVGTVDKMAVREWLHANHKRFVKIRLGPETCLHT 1064
L + KR L+ +Q L G K V + + L ++ L
Sbjct: 1906 LLINEKRDQLEEEQLHLNIGLKKLRDTEAQVKDL--QVSLAQKNRELDVKNEQANQKLKQ 1963
Query: 1065 VDRKGEKLRTVNFKNCDTVTIEESQPERGKKKHPM---VLIRVHRDHDLVLEFDSLAARK 1121
+ + + K D ++ R K+ + + + + +
Sbjct: 1964 MVQDQQA---AEIKQKDARELQVQLDVRNKEIAVQKVKAYADLEKAEPTGPLREEVEQLE 2020
Query: 1122 KFMNKMEGFLNAMKKHLIIVQSPRELMLAKAETRERRQKKLEHFFRE-------AYALTF 1174
N+++ + + + ++ + T R ++++ + + AL
Sbjct: 2021 NAANELKLKQDEIVATITALEKSIATYKEEYATLIRETEQIKTESSKVKNKVDRSIALLD 2080
Query: 1175 GLKPGEKRR 1183
L E+ R
Sbjct: 2081 NLN-SERGR 2088
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics,
protein structure INI nysgrc, PSI-biology; 2.90A
{Sinorhizobium meliloti}
Length = 521
Score = 30.3 bits (69), Expect = 8.0
Identities = 8/40 (20%), Positives = 13/40 (32%)
Query: 466 HRAGYDRSTGTSPNSPRQQINRVSSWIDGSFIYSTSEAWL 505
H GT + + + +IDG + TS
Sbjct: 5 HHHSSGVDLGTENLYFQSMMYELGHFIDGKRVAGTSGRVS 44
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2,
protein structure initiative, northeast structural
genomics consortium; 2.60A {Pyrococcus furiosus}
Length = 158
Score = 29.3 bits (66), Expect = 8.1
Identities = 7/27 (25%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 1827 GPFGGGNQDWYKFEVAVMVGGGIGVTP 1853
GP G KF + +G G+
Sbjct: 12 GPLGTP-VPMEKFGKILAIGAYTGIVE 37
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel,
FAD-binding domain, NADH-binding domain, oxidoreductase;
HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1
PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Length = 275
Score = 29.7 bits (67), Expect = 9.9
Identities = 29/157 (18%), Positives = 50/157 (31%), Gaps = 32/157 (20%)
Query: 1730 KYMALDILETELLPSDVIKIRFYRPPN---FTYHSGQWVRLACTAFKNAAYHSFTLTSAP 1786
L +++ E++ D + RF P GQ + L+ N +T S+
Sbjct: 15 IKYPLRLIDREIISHDTRRFRFALPSPQHILGLPVGQHIYLSARIDGNLVVRPYTPISSD 74
Query: 1787 HE-NFLSCHIKAQGPWTW-------KLRNYFDPCNFNASEDQPKIRLEGPFG-------- 1830
+ F+ IK T K+ Y + + + I GP G
Sbjct: 75 DDKGFVDLVIKVYFKDTHPKFPAGGKMSQYLE--SMQIGD---TIEFRGPSGLLVYQGKG 129
Query: 1831 --------GGNQDWYKFEVAVMVGGGIGVTPYASILN 1859
N + M+ GG G+TP ++
Sbjct: 130 KFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIR 166
>3acx_A Dehydrosqualene synthase; CRTM, carotenoid biosynthesis,
staphyloxanthin biosynthesis, transferase, head-TO-head
condensation, inhibitor; HET: 673; 1.31A {Staphylococcus
aureus} PDB: 2zcp_A* 2zcq_A* 2zcr_A* 2zcs_A* 2zy1_A*
3acw_A* 2zco_A* 3acy_A* 3npr_A* 3nri_A* 3tfn_A* 3tfp_A*
3tfv_A* 3adz_A* 3lgz_B* 3vjd_A* 3vje_A* 3ae0_A* 4ea2_A*
4e9u_A* ...
Length = 293
Score = 29.6 bits (67), Expect = 9.9
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 19/103 (18%)
Query: 1372 VFVRMMFNIVDKDGDGRISFQEFLDTVVLFSRGHTEDKLRIIFDMCDNDRNGVIDKGELA 1431
R + + +D GD + Q ++ ++ I + D
Sbjct: 48 AVCRKIDDSIDVYGDIQFLNQ-------------IKEDIQSIEKYPYEYHHFQSD----R 90
Query: 1432 EMLRSLVEMARTTSLTDSQVTELIDGMFQDAGLDSKDFLTYQD 1474
++ +L +A+ ++ LID +++D F T +
Sbjct: 91 RIMMALQHVAQHKNIAFQSFYNLIDTVYKD--QHFTMFETDAE 131
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.138 0.422
Gapped
Lambda K H
0.267 0.0796 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 32,125,379
Number of extensions: 2055017
Number of successful extensions: 6843
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5685
Number of HSP's successfully gapped: 1407
Length of query: 2014
Length of database: 6,701,793
Length adjustment: 108
Effective length of query: 1906
Effective length of database: 3,686,325
Effective search space: 7026135450
Effective search space used: 7026135450
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (28.7 bits)