BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5585
(110 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 77/108 (71%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M VDRG+F PY DAPQ IGY T+SAPHMHA AL+ L+ HL G +ALDVGSGSGY
Sbjct: 32 MKSVDRGDFAPRAPYEDAPQRIGYNATVSAPHMHAAALDYLQNHLVAGAKALDVGSGSGY 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT CMA+M+G +G VGI+H+P LV S KN+ K H L+ G V+++
Sbjct: 92 LTVCMAMMVGRNGTVVGIEHMPQLVELSEKNIRKHHSEQLERGNVIII 139
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 79/108 (73%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAKSNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ S+ NV+K LL SGRV LV
Sbjct: 92 LTACFARMVGNSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLV 139
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 79/108 (73%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAKSNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ S+ NV+K LL SGRV LV
Sbjct: 92 LTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLV 139
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLNEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ S+ NV K LL SGRV LV
Sbjct: 92 LTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPMLLSSGRVQLV 139
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR +F NPY+D+PQSIGY+ TISAPHMHA+ALELL +HL G +ALDVGSGSG
Sbjct: 32 MLATDRSHFSRCNPYMDSPQSIGYQATISAPHMHAYALELLHDHLYEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
L+ C + M+G GK +GIDHI +LV S+ NV+K +L+ SGR+ L+
Sbjct: 92 LSVCFSRMVGPTGKVIGIDHIKELVEDSIANVKKDDPSLITSGRIKLI 139
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ S+ NV K LL SGRV LV
Sbjct: 92 LTACFARMVGPSGKVIGIDHIKELVDDSINNVRKDDPMLLSSGRVQLV 139
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 62/108 (57%), Positives = 80/108 (74%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ +NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRCHYAKYNPYMDSPQSIGFQATISAPHMHAYALELLSDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C + M+G G+ VGIDHI +LV+ S+ NV+K LL SGRV L+
Sbjct: 92 LTACFSRMVGPKGQVVGIDHIKELVDDSINNVKKDDPTLLSSGRVKLI 139
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 78/108 (72%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ SV NV K LL SGRV LV
Sbjct: 92 LTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLV 139
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAECNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ S+ NV K LL SGRV LV
Sbjct: 92 LTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPTLLSSGRVQLV 139
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 78/108 (72%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M DR ++ NPY+D+PQSIG++ TISAPHMHA+ALELL + L G +ALDVGSGSG
Sbjct: 32 MLATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGI 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C A M+G GK +GIDHI +LV+ S+ NV K LL SGRV LV
Sbjct: 92 LTACFARMVGCTGKVIGIDHIKELVDDSINNVRKDDPTLLSSGRVQLV 139
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/97 (60%), Positives = 75/97 (77%), Gaps = 2/97 (2%)
Query: 1 MNQVDRGNFCS--HNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGS 58
M VDRG F + + Y+D+P SIGY VTISAPHMHA L+LL +HL+ G R LDVGSG+
Sbjct: 35 MEAVDRGVFVTDRSSAYVDSPMSIGYNVTISAPHMHAMCLQLLEKHLKPGMRVLDVGSGT 94
Query: 59 GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95
GYLT C A+M+G G+A+G++HIP+LV SSVKN+E S
Sbjct: 95 GYLTACFAVMVGTEGRAIGVEHIPELVASSVKNIEAS 131
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 73/102 (71%), Gaps = 2/102 (1%)
Query: 1 MNQVDRGNFCSH--NPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGS 58
M +DR F PY D+P IGY TISAPHMHA LELL+++L+ G ALDVGSGS
Sbjct: 35 METIDRALFVPEGFTPYTDSPMPIGYNATISAPHMHATCLELLKDYLQPGMHALDVGSGS 94
Query: 59 GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALL 100
GYLT C A+M+G G+AVGI+HIP+LV +S +NVE+S A L
Sbjct: 95 GYLTACFAMMVGPEGRAVGIEHIPELVVASTENVERSAAAAL 136
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 75/113 (66%), Gaps = 5/113 (4%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
M + DR ++ NPY+DAPQ IG VTISAPHMHA ALE LR+HL+ G R LDVGSGSGY
Sbjct: 32 MKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGY 91
Query: 61 LTTCMALMMGEHG-----KAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108
LT C + G + VGI+H +LV S N+ +++LDSG++L+V
Sbjct: 92 LTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIV 144
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 65/94 (69%)
Query: 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGY 60
MN R +C +PY+D+PQSIGY VTISAPHMHA AL+ L L+ G ALD+GSGSGY
Sbjct: 32 MNATSRSFYCPLSPYMDSPQSIGYGVTISAPHMHATALQELEPVLQPGCSALDIGSGSGY 91
Query: 61 LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94
L MA M+ +G GI+HIP LV +S KN+ K
Sbjct: 92 LVAAMARMVAPNGTVKGIEHIPQLVETSKKNLLK 125
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 73/110 (66%), Gaps = 7/110 (6%)
Query: 4 VDRGNFCSH----NPYLDAPQSIGYKVTISAPHMHAHALELL--REHLENGKRALDVGSG 57
VDR F + NPY D P+ IGY TISAPHMHA L+LL R + NG ALD+GSG
Sbjct: 77 VDRKLFLENKNVENPYYDEPKPIGYNATISAPHMHALMLDLLADRIPMSNG-VALDIGSG 135
Query: 58 SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLL 107
SGY+T C+ +MG G+ +G++HIP+L+ S++++++ LLD + L+
Sbjct: 136 SGYVTACLGHLMGCTGRVIGVEHIPELIERSIESIKRLDSTLLDRIQFLV 185
>sp|A7HL14|PIMT_FERNB Protein-L-isoaspartate O-methyltransferase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=pcm
PE=3 SV=1
Length = 199
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 6/96 (6%)
Query: 1 MNQVDRGNFC----SHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
MN+VDR F + YLD P IGY TISAPHM E L L++G R L++G+
Sbjct: 19 MNKVDRKLFVPSELQESAYLDIPLPIGYGQTISAPHMVGMMCEYL--ELKDGDRVLEIGT 76
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92
GSGY M+L++GE G I+ IP+LV + K +
Sbjct: 77 GSGYNAAVMSLLVGESGWIYTIERIPELVQEAQKRI 112
>sp|Q12UV0|PIMT_METBU Protein-L-isoaspartate O-methyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=pcm PE=3 SV=1
Length = 203
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F + Y D P IGY TISAPHM A +LL+ + G L++GS
Sbjct: 18 MKKVPRHLFLPEDMQSFAYADTPLPIGYDQTISAPHMVAIMCDLLK--ITEGMTILEIGS 75
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95
GSGY MA + GE+GK ++ IP+LV+ + N+E++
Sbjct: 76 GSGYNAAVMAELAGENGKVYTVERIPELVDLARNNLERA 114
>sp|O27962|PIMT2_ARCFU Protein-L-isoaspartate O-methyltransferase 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm2 PE=3 SV=1
Length = 219
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D P IGY TISAPHM A ELL L G + L+VG+G GY A ++G+ GK
Sbjct: 46 YVDTPLPIGYGQTISAPHMVAIMCELL--DLREGDKVLEVGTGCGYHAAVTAEIVGKSGK 103
Query: 75 AVGIDHIPDLVNSS 88
+ I++IP+L +
Sbjct: 104 VISIEYIPELAERA 117
>sp|O30199|PIMT1_ARCFU Protein-L-isoaspartate O-methyltransferase 1 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=pcm1 PE=3 SV=1
Length = 216
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D P IGY TISAPHM A ELL L G+R L++G+G GY A ++G+ G
Sbjct: 46 YVDTPLPIGYGQTISAPHMVAIMCELL--DLREGERVLEIGTGCGYHAAVTAEIVGKRGL 103
Query: 75 AVGIDHIPDLVNSSVKNV 92
V ++ IP+L + +N+
Sbjct: 104 VVSVERIPELAEIAKRNL 121
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 53/100 (53%), Gaps = 6/100 (6%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M++V R F Y D P IG+ TISAPHM A +LL L G + L+VG
Sbjct: 22 MSRVPRELFVPEELRPMAYEDRPLPIGHGQTISAPHMVAMMCDLL--DLREGMKVLEVGG 79
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96
G GY MA ++G G ++ IP+LV + +N+E++
Sbjct: 80 GCGYHAAVMAELVGPSGHVYSVERIPELVEMARRNLERAR 119
>sp|Q8TT93|PIMT1_METAC Protein-L-isoaspartate O-methyltransferase 1 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm1 PE=3 SV=1
Length = 251
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 8 NFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMAL 67
+ Y+D P IG+ TISAPHM A +LL L G + L++G+GSGY M
Sbjct: 77 EYAKKGAYIDTPLEIGFGQTISAPHMVAIMCDLL--ELSEGLKVLEIGAGSGYNAAVMGE 134
Query: 68 MMGEHGKAVGIDHIPDLVNSSVKNVEKSH----KALLDSG 103
++G+ G ++ I LV+ + +N++K+ LLD G
Sbjct: 135 LVGKSGHVYTVERIEPLVDFARENLKKAGYENVTVLLDDG 174
>sp|A8AAV7|PIMT_IGNH4 Protein-L-isoaspartate O-methyltransferase OS=Ignicoccus hospitalis
(strain KIN4/I / DSM 18386 / JCM 14125) GN=pcm PE=3 SV=1
Length = 211
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 1 MNQVDRGNFCS----HNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F H Y D P IG TISAPHM A+ +E L G + L+VG+
Sbjct: 27 MMKVPRELFVPEELRHMAYEDTPLPIGAGQTISAPHMVAYMVEAA--ELRRGDKVLEVGT 84
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88
GSGY MA ++G G I+ IP+L +
Sbjct: 85 GSGYHAAVMAELVGPEGHVYTIERIPELAERA 116
>sp|Q6M116|PIMT_METMP Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=pcm PE=3 SV=1
Length = 212
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 4 VDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSG 59
V R F S + Y+D+P IGY TISA HM E L L+ G+ L+VG+GSG
Sbjct: 31 VPRHKFISKSMESYAYVDSPLEIGYGQTISAIHMVGIMCEEL--DLDEGQNVLEVGTGSG 88
Query: 60 YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94
Y ++ ++GE GK I+ IP+L +S K + +
Sbjct: 89 YHAAVVSKIVGESGKVTTIERIPELFENSKKTLSE 123
>sp|Q8TYL4|PIMT_METKA Protein-L-isoaspartate O-methyltransferase OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pcm
PE=3 SV=1
Length = 226
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F + Y+D+P IG TISAPHM A ELL G + L+VG+
Sbjct: 34 MLKVPRHEFVPEDLRDRAYVDSPLPIGRGQTISAPHMVAIMTELLDPR--PGHKVLEVGA 91
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95
GSGY +A ++ G+ + ++ IP+L + + N++K+
Sbjct: 92 GSGYHAAVVAELVKPDGRVITVERIPELADFARNNLKKT 130
>sp|Q57636|PIMT_METJA Protein-L-isoaspartate O-methyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=pcm PE=1 SV=1
Length = 215
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D P IGY TISA HM ELL L+ G + L++G+G GY A ++GE G
Sbjct: 47 YVDTPLEIGYGQTISAIHMVGMMCELL--DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGL 104
Query: 75 AVGIDHIPDLVNSSVKNVEK 94
V I+ IP+L + + + K
Sbjct: 105 VVSIERIPELAEKAERTLRK 124
>sp|Q9YDA1|PIMT_AERPE Protein-L-isoaspartate O-methyltransferase OS=Aeropyrum pernix
(strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138
/ K1) GN=pcm PE=3 SV=2
Length = 260
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y D P IG+ TISAP + L+LL + G++ LDVG+GSGY + +A ++ G+
Sbjct: 78 YEDRPLPIGHGQTISAPGVVGRMLQLL--DPQPGEKVLDVGAGSGYQSALLAELVTPGGR 135
Query: 75 AVGIDHIPDLVNSSVKNVEKS 95
++ IP+L + +N+EK+
Sbjct: 136 VYAVERIPELAEYARENLEKT 156
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 1 MNQVDRGNFC----SHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F Y D P IG+ TIS PH A E+L L G + L++G+
Sbjct: 50 MFRVPRHRFVPEYEQRAAYTDRPLEIGHGQTISTPHTVALMCEIL--ELSEGHKVLEIGT 107
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94
GSGY MA ++G+ G ++ I LVN + KN+E+
Sbjct: 108 GSGYNAAVMAELVGKTGHIYSVERIEPLVNFARKNLEQ 145
>sp|A6VI91|PIMT_METM7 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=pcm PE=3 SV=1
Length = 212
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D+P IGY TISA HM E L L+ G+ L+VG+GSGY ++ ++GE G
Sbjct: 46 YIDSPLGIGYGQTISAIHMVGIMCEEL--DLDVGQNVLEVGTGSGYHAAVVSEIVGESGN 103
Query: 75 AVGIDHIPDLVNSSVKNVEKSHKALLDSG 103
I+ IP+L EKS + LL+ G
Sbjct: 104 VTTIERIPEL-------FEKSKQVLLELG 125
>sp|A6LNM3|PIMT_THEM4 Protein-L-isoaspartate O-methyltransferase OS=Thermosipho
melanesiensis (strain BI429 / DSM 12029) GN=pcm PE=3
SV=1
Length = 198
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
MN++DR F N Y D P IG+ TISAPHM + L L+ + L++G+
Sbjct: 18 MNKIDRKYFVPENVKDLAYDDIPLPIGFGQTISAPHMVGIMCKEL--DLKEKDKVLEIGT 75
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94
GSGY M+L++G+ G I+ I L + K ++
Sbjct: 76 GSGYNAAVMSLLVGKSGHIYTIERIKQLYKIATKRFKQ 113
>sp|Q8PW90|PIMT_METMA Protein-L-isoaspartate O-methyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=pcm PE=3 SV=1
Length = 243
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D P IG+ TISAPHM A E+L L G + L++G+GSGY M+ ++G+ G
Sbjct: 73 YVDMPLEIGHGQTISAPHMVAMMCEIL--ELAEGHKVLEIGAGSGYNAAVMSELVGKTGH 130
Query: 75 AVGIDHIPDLVNSSVKNVE----KSHKALLDSG 103
++ + L N + KN++ K+ LL++G
Sbjct: 131 IYTVERVEPLANFAKKNLKEAGYKNVTVLLENG 163
>sp|B8J9E3|PIMT_ANAD2 Protein-L-isoaspartate O-methyltransferase OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=pcm PE=3
SV=1
Length = 209
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 4 VDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSG 59
+DR F S + Y D P IG+ TIS P++ A E L LE G+R L+VG+GSG
Sbjct: 26 LDRARFVSRDLSAEAYADRPLPIGFGQTISQPYVVAFMTEAL--ELEGGERVLEVGTGSG 83
Query: 60 YLTTCMALMMGE 71
Y T +A + GE
Sbjct: 84 YQTALLARLAGE 95
>sp|A6UWM1|PIMT_META3 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=pcm PE=3
SV=1
Length = 216
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D P +IG+ TISA HM A + L L+ G + L++G+GSGY +A ++G++G+
Sbjct: 46 YVDTPLNIGHGQTISAIHMVAIICDAL--DLKEGDKVLEIGTGSGYHAAVVAEIVGKNGQ 103
Query: 75 AVGIDHIPDLVNSSVKNVEK 94
+ I+ IP+L + ++K
Sbjct: 104 VITIERIPELAEKAESTLKK 123
>sp|O26915|PIMT_METTH Protein-L-isoaspartate O-methyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pcm PE=3 SV=1
Length = 217
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 1 MNQVDRGNFCS----HNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F H Y+D P IG TISAPHM A E+L LE G + L++G+
Sbjct: 27 MERVPREEFVPEDEMHRAYMDMPLPIGEGQTISAPHMVAMIAEIL--DLEPGMKVLEIGT 84
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92
G GY +A ++G G ++ I L + K +
Sbjct: 85 GCGYNAAVIAEIIGPEGHLYTVERIGILYERARKKL 120
>sp|A9A8I9|PIMT_METM6 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=pcm PE=3 SV=1
Length = 212
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 4 VDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSG 59
V R F N Y+D+P IG TISA HM E L L G+ L+VG+GSG
Sbjct: 31 VPRHKFLPKNMEEYAYIDSPLGIGCGQTISAIHMVGIMCEEL--DLNMGQNVLEVGTGSG 88
Query: 60 YLTTCMALMMGEHGKAVGIDHIPDLVNSS 88
Y ++ ++GE GK ++ IP+L S
Sbjct: 89 YQAAVVSKIVGESGKVTTVERIPELFEKS 117
>sp|A6UR90|PIMT_METVS Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=pcm
PE=3 SV=1
Length = 209
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Query: 9 FCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALM 68
+ + Y D P IGY TISA HM E L L+ G+ L++G+GSGY + +
Sbjct: 40 YLESSAYQDNPLEIGYGQTISAIHMVGIMCEEL--DLDKGQNVLEIGTGSGYHAAVVLEI 97
Query: 69 MGEHGKAVGIDHIPDLVNSSVKNVEK 94
+G+ GK I+ + +L NS+ +N+ K
Sbjct: 98 IGKSGKLTTIERVFELFNSAKENLLK 123
>sp|A4G087|PIMT_METM5 Protein-L-isoaspartate O-methyltransferase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=pcm PE=3 SV=1
Length = 212
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y+D+P IG TISA HM E L L+ G+ L+VG+GSGY ++ ++GE GK
Sbjct: 46 YIDSPLGIGCGQTISAIHMVGIMCEEL--DLDVGQNVLEVGTGSGYHAAVVSEIVGESGK 103
Query: 75 AVGIDHIPDLVNSS 88
I+ IP+L S
Sbjct: 104 VTTIERIPELFEKS 117
>sp|Q0W2W0|PIMT_UNCMA Protein-L-isoaspartate O-methyltransferase OS=Uncultured
methanogenic archaeon RC-I GN=pcm PE=3 SV=1
Length = 188
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M++V R F + Y D P IG+ TISAP M A + L + G + L++G+
Sbjct: 1 MDRVPREEFVPEDVRPDAYYDTPLPIGHNQTISAPSMVAIMCQAL--DIREGNKVLEIGT 58
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVN 86
G GY MA++ G G ++ IP+L +
Sbjct: 59 GLGYHAAVMAVLAGASGVVYTVERIPELAD 88
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 13/106 (12%)
Query: 1 MNQVDRGNFCS----HNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F H Y D P IG+ TISAPHM A E L+ G + L+VG+
Sbjct: 37 MLRVPRELFVPDELRHLAYEDTPLPIGHGQTISAPHMVAMMTEYA--DLKPGMKVLEVGA 94
Query: 57 GSGYLTTCMALMMG------EH-GKAVGIDHIPDLVNSSVKNVEKS 95
GSGY MA ++ EH G I+ IP+L + +N+E++
Sbjct: 95 GSGYHAAVMAEVVAPSDEPREHWGHVYTIERIPELAEFARRNLERA 140
>sp|Q2IIL9|PIMT_ANADE Protein-L-isoaspartate O-methyltransferase OS=Anaeromyxobacter
dehalogenans (strain 2CP-C) GN=pcm PE=3 SV=1
Length = 209
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 MNQVDRGNFCSH----NPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
+ ++DR F Y D P IG+ TIS P + A E L L+ G+R L+VG+
Sbjct: 23 IAELDRARFVPPHLVAEAYADRPLPIGFGQTISQPFVVAFMTEAL--GLDGGERVLEVGT 80
Query: 57 GSGYLTTCMALMMGE 71
GSGY T +A + GE
Sbjct: 81 GSGYQTALLARLAGE 95
>sp|Q2J302|PIMT1_RHOP2 Protein-L-isoaspartate O-methyltransferase 1 OS=Rhodopseudomonas
palustris (strain HaA2) GN=pcm1 PE=3 SV=1
Length = 245
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M QV R F Y D+P IG+ TIS P++ A +E L L G+R L++G+
Sbjct: 44 MRQVPREAFLPERMRDLAYDDSPLPIGHGQTISQPYIVAAMIEAL--QLNGGERVLEIGA 101
Query: 57 GSGYLTTCMALMMGE 71
GSGY +A + GE
Sbjct: 102 GSGYAAAVLAQIAGE 116
>sp|B6YX51|PIMT_THEON Protein-L-isoaspartate O-methyltransferase OS=Thermococcus
onnurineus (strain NA1) GN=pcm PE=3 SV=1
Length = 220
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
++D P I TISAPHM A LEL LE G LD+G+GSG+ A ++
Sbjct: 50 HVDEPLPIPGGQTISAPHMVAIMLEL--AELEEGMNVLDIGTGSGWNAALAAELV--KTD 105
Query: 75 AVGIDHIPDLVNSSVKNVEKS 95
++ IP+LV + KN+EK+
Sbjct: 106 VYTVERIPELVEFARKNLEKA 126
>sp|A7HHV3|PIMT2_ANADF Protein-L-isoaspartate O-methyltransferase 2 OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=pcm2 PE=3 SV=2
Length = 243
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F YLD P IG TIS P++ A + L L G+R L+VGS
Sbjct: 62 MGKVPRERFVPEQWRSLAYLDEPLPIGRGQTISQPYVVAFMAQAL--ALRGGERVLEVGS 119
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92
GSGY +A + G GI+ P+L SV+ +
Sbjct: 120 GSGYAAAVLAHLA---GAVYGIELEPELHARSVETL 152
>sp|A1RSC6|PIMT_PYRIL Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=pcm PE=3 SV=1
Length = 207
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y D P + + TISAPHM A EL+ G + L+VG+GSGY A + GK
Sbjct: 42 YEDRPLPLFFDATISAPHMVAMMCELVEPR--PGMKILEVGTGSGYQAAVCAEAIERKGK 99
Query: 75 AVGIDHIPDLVNSSVKNVEK 94
I+ + +L + +N+E+
Sbjct: 100 VYTIEIVKELAIYAAQNIER 119
>sp|A3DMG3|PIMT_STAMF Protein-L-isoaspartate O-methyltransferase OS=Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pcm PE=3
SV=1
Length = 225
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEH-- 72
Y+D P IG+ TISA HM A E L E G L++G+GSGY +A ++ +
Sbjct: 49 YIDEPLPIGFGQTISAIHMVAIMTEEL--DPEPGNIVLEIGTGSGYQAAVLAEIVAKQDP 106
Query: 73 ---GKAVGIDHIPDLVNSSVKNVEKS 95
G ++ IP+L + KN+E++
Sbjct: 107 NRRGHVYTVERIPELAEFAKKNLERT 132
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 5 DRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTC 64
DR +H +D P I TISAPHM A LE+ L+ G L+VG+GSG+
Sbjct: 44 DRYKKYAH---VDEPLPIPAGQTISAPHMVAIMLEI--ADLKPGMNVLEVGTGSGWNAAL 98
Query: 65 MALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95
+A ++ G I+ IP+LV + +N+E++
Sbjct: 99 IAEIV--KGDVYSIERIPELVEFAKRNLERA 127
>sp|B1YC47|PIMT_PYRNV Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta)
GN=pcm PE=3 SV=1
Length = 207
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74
Y D P + TISAPHM A EL+ + G + L+VG+GSGY A M G+
Sbjct: 42 YEDRPLPLFADATISAPHMVAMMCELVEP--KPGMKILEVGAGSGYQAAVCAEAMERRGR 99
Query: 75 AVGIDHIPDLVNSSVKNVEK 94
++ + +L + +N+E+
Sbjct: 100 VYTVEIVKELAIYAAQNIER 119
>sp|Q9UXX0|PIMT_PYRAB Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=pcm PE=3 SV=2
Length = 216
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 5 DRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTC 64
DR +H +D P I T+SAPHM A LE+ + L+ G L+VG+GSG+
Sbjct: 40 DRYKSYAH---IDEPLPIPAGQTVSAPHMVAIMLEIAK--LKEGMNVLEVGTGSGWNAAL 94
Query: 65 MALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95
++ ++ I+ IP+LV + +N+E++
Sbjct: 95 ISYIV--KTDVYSIERIPELVEFAKRNLERA 123
>sp|C6A3F2|PIMT_THESM Protein-L-isoaspartate O-methyltransferase OS=Thermococcus
sibiricus (strain MM 739 / DSM 12597) GN=pcm PE=3 SV=1
Length = 221
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 3 QVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGS 58
+V R F S ++D P I TISAPHM A LEL LE G L+VG+GS
Sbjct: 34 RVPRYKFVSDRYKEYAHVDEPLPIPAGQTISAPHMVAIMLEL--AELEGGMNVLEVGAGS 91
Query: 59 GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95
G+ + ++ + I+ + DLV + KN+E++
Sbjct: 92 GWNAALIYELVKR--EVYTIERVSDLVEFARKNLERA 126
>sp|A3MY16|PIMT_PYRCJ Protein-L-isoaspartate O-methyltransferase OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=pcm PE=3 SV=1
Length = 207
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 1 MNQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGS 56
M +V R F + Y D P + TISAPHM A EL+ G + L+VG+
Sbjct: 24 MLKVPREEFVTPEYRMMAYEDRPLPLFAGATISAPHMVAMMCELIEPR--PGMKILEVGT 81
Query: 57 GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94
GSGY A + GK ++ + +L + +N+E+
Sbjct: 82 GSGYHAAVCAEAIERQGKVYTVEIVRELAIFAAQNLER 119
>sp|Q74CZ5|PIMT_GEOSL Protein-L-isoaspartate O-methyltransferase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=pcm PE=3 SV=2
Length = 207
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 15 YLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALM 68
Y D P IG K TIS P+M A ELL L+ ++ L++G+GSGY +A+M
Sbjct: 38 YSDTPLPIGEKQTISQPYMVALMTELL--ELKGKEKVLEIGTGSGYQAAILAVM 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,919,655
Number of Sequences: 539616
Number of extensions: 1596789
Number of successful extensions: 7610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 248
Number of HSP's successfully gapped in prelim test: 569
Number of HSP's that attempted gapping in prelim test: 7042
Number of HSP's gapped (non-prelim): 819
length of query: 110
length of database: 191,569,459
effective HSP length: 78
effective length of query: 32
effective length of database: 149,479,411
effective search space: 4783341152
effective search space used: 4783341152
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)