Query psy5585
Match_columns 110
No_of_seqs 109 out of 1476
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 21:20:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5585.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5585hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pbf_A Protein-L-isoaspartate 99.7 5.2E-17 1.8E-21 105.6 11.2 96 1-96 34-133 (227)
2 1r18_A Protein-L-isoaspartate( 99.7 5.9E-17 2E-21 105.5 7.9 96 1-96 38-138 (227)
3 1i1n_A Protein-L-isoaspartate 99.7 3E-16 1E-20 101.9 10.0 95 2-96 32-126 (226)
4 3lbf_A Protein-L-isoaspartate 99.6 2.3E-15 8E-20 96.6 8.3 93 1-98 29-125 (210)
5 2yxe_A Protein-L-isoaspartate 99.6 4.7E-15 1.6E-19 95.5 8.6 94 2-97 30-127 (215)
6 1jg1_A PIMT;, protein-L-isoasp 99.6 1E-14 3.5E-19 95.4 8.8 92 2-97 44-139 (235)
7 1dl5_A Protein-L-isoaspartate 99.5 2.9E-14 1E-18 97.2 8.5 95 1-97 22-125 (317)
8 1vbf_A 231AA long hypothetical 99.5 2.9E-14 9.9E-19 92.7 5.9 90 1-95 20-115 (231)
9 4gek_A TRNA (CMO5U34)-methyltr 99.5 4.5E-13 1.6E-17 89.3 10.2 64 33-96 56-120 (261)
10 3mti_A RRNA methylase; SAM-dep 99.4 2E-12 6.8E-17 81.4 8.3 62 33-97 8-69 (185)
11 3uzu_A Ribosomal RNA small sub 99.3 5.2E-12 1.8E-16 85.0 8.7 77 26-105 23-100 (279)
12 3kr9_A SAM-dependent methyltra 99.3 3.4E-12 1.1E-16 83.5 7.5 60 38-98 6-65 (225)
13 3e05_A Precorrin-6Y C5,15-meth 99.3 7.5E-12 2.6E-16 80.0 8.9 66 29-97 24-89 (204)
14 3lec_A NADB-rossmann superfami 99.3 6.3E-12 2.2E-16 82.5 8.3 60 38-98 12-71 (230)
15 3gnl_A Uncharacterized protein 99.3 5.2E-12 1.8E-16 83.5 7.4 60 38-98 12-71 (244)
16 3eey_A Putative rRNA methylase 99.3 1.5E-11 5E-16 78.1 9.2 54 44-97 19-72 (197)
17 3njr_A Precorrin-6Y methylase; 99.3 1.8E-11 6.2E-16 78.6 9.7 67 27-98 37-103 (204)
18 3fut_A Dimethyladenosine trans 99.3 6.9E-12 2.4E-16 84.1 7.7 75 25-105 27-101 (271)
19 2b25_A Hypothetical protein; s 99.3 6.3E-12 2.1E-16 86.1 7.4 72 21-94 81-152 (336)
20 3jwh_A HEN1; methyltransferase 99.3 1.5E-11 5.2E-16 79.1 8.7 63 32-97 16-78 (217)
21 4df3_A Fibrillarin-like rRNA/T 99.3 6.1E-12 2.1E-16 82.7 6.8 51 45-95 75-125 (233)
22 3fzg_A 16S rRNA methylase; met 99.3 1.5E-11 5.3E-16 78.6 8.2 64 34-98 36-99 (200)
23 3jwg_A HEN1, methyltransferase 99.3 2.1E-11 7.2E-16 78.5 8.7 62 32-96 16-77 (219)
24 1nv8_A HEMK protein; class I a 99.3 1E-11 3.5E-16 83.6 7.5 50 46-97 122-171 (284)
25 1ws6_A Methyltransferase; stru 99.3 5E-11 1.7E-15 73.6 10.1 65 29-96 23-87 (171)
26 3u81_A Catechol O-methyltransf 99.3 3.1E-11 1.1E-15 78.1 9.4 53 45-97 56-108 (221)
27 3tqs_A Ribosomal RNA small sub 99.3 7.4E-12 2.5E-16 83.3 6.5 74 26-104 10-84 (255)
28 2yxd_A Probable cobalt-precorr 99.3 6.6E-11 2.2E-15 73.7 10.0 64 29-97 19-82 (183)
29 3hm2_A Precorrin-6Y C5,15-meth 99.3 1.4E-11 4.8E-16 76.7 6.6 67 29-98 9-75 (178)
30 3dh0_A SAM dependent methyltra 99.3 3.8E-11 1.3E-15 77.1 8.8 61 35-97 27-87 (219)
31 3p9n_A Possible methyltransfer 99.3 5.7E-11 1.9E-15 75.1 9.3 67 29-97 25-92 (189)
32 3tr6_A O-methyltransferase; ce 99.2 6.6E-11 2.3E-15 76.4 9.7 54 45-98 62-115 (225)
33 1pjz_A Thiopurine S-methyltran 99.2 1.8E-11 6E-16 78.6 6.2 46 45-93 20-65 (203)
34 3mb5_A SAM-dependent methyltra 99.2 7.1E-11 2.4E-15 77.7 9.2 64 32-97 80-143 (255)
35 3ntv_A MW1564 protein; rossman 99.2 8.9E-11 3.1E-15 76.6 9.6 65 30-97 56-120 (232)
36 1sui_A Caffeoyl-COA O-methyltr 99.2 1.2E-10 4.3E-15 76.8 10.1 53 45-97 77-129 (247)
37 3dr5_A Putative O-methyltransf 99.2 8.2E-11 2.8E-15 76.6 8.9 49 49-97 58-106 (221)
38 3dxy_A TRNA (guanine-N(7)-)-me 99.2 5.5E-11 1.9E-15 77.2 8.0 52 46-98 33-84 (218)
39 2hnk_A SAM-dependent O-methylt 99.2 1.1E-10 3.6E-15 76.4 9.3 68 28-97 43-110 (239)
40 3gru_A Dimethyladenosine trans 99.2 3.4E-11 1.2E-15 81.6 6.9 72 26-102 31-103 (295)
41 2fca_A TRNA (guanine-N(7)-)-me 99.2 5.6E-11 1.9E-15 76.8 7.7 51 46-97 37-87 (213)
42 2b3t_A Protein methyltransfera 99.2 4.9E-11 1.7E-15 79.6 7.5 62 35-97 96-158 (276)
43 3c3y_A Pfomt, O-methyltransfer 99.2 2.6E-10 9.1E-15 74.7 10.8 53 45-97 68-120 (237)
44 3r3h_A O-methyltransferase, SA 99.2 2.5E-11 8.4E-16 80.0 5.9 65 31-97 46-110 (242)
45 3duw_A OMT, O-methyltransferas 99.2 1E-10 3.4E-15 75.5 8.6 53 45-97 56-108 (223)
46 2fpo_A Methylase YHHF; structu 99.2 9.2E-11 3.2E-15 75.1 8.3 65 30-97 38-102 (202)
47 3grz_A L11 mtase, ribosomal pr 99.2 1.8E-10 6.1E-15 73.5 9.6 65 32-98 45-109 (205)
48 2ift_A Putative methylase HI07 99.2 9.2E-11 3.1E-15 75.1 8.2 64 31-97 38-101 (201)
49 1qam_A ERMC' methyltransferase 99.2 3.1E-11 1.1E-15 79.6 5.7 63 27-94 12-74 (244)
50 3tfw_A Putative O-methyltransf 99.2 1.2E-10 4.1E-15 76.8 8.6 54 45-98 61-114 (248)
51 1nkv_A Hypothetical protein YJ 99.2 1.2E-10 4.2E-15 76.4 8.4 63 31-97 22-84 (256)
52 3c3p_A Methyltransferase; NP_9 99.2 1.9E-10 6.3E-15 73.8 9.1 52 46-97 55-106 (210)
53 3tma_A Methyltransferase; thum 99.2 1.3E-10 4.4E-15 80.2 8.6 70 27-98 185-254 (354)
54 1yzh_A TRNA (guanine-N(7)-)-me 99.2 1.3E-10 4.5E-15 74.7 8.0 51 46-97 40-90 (214)
55 3iv6_A Putative Zn-dependent a 99.2 3.1E-11 1.1E-15 80.5 5.1 59 32-95 32-90 (261)
56 3g89_A Ribosomal RNA small sub 99.2 1.1E-10 3.6E-15 77.3 7.6 51 47-98 80-130 (249)
57 1m6y_A S-adenosyl-methyltransf 99.2 1.7E-10 5.8E-15 78.4 8.8 62 31-95 12-73 (301)
58 1xdz_A Methyltransferase GIDB; 99.2 1E-10 3.6E-15 76.5 7.4 51 46-97 69-119 (240)
59 1u2z_A Histone-lysine N-methyl 99.2 1.9E-10 6.5E-15 81.6 9.2 63 31-96 228-297 (433)
60 1qyr_A KSGA, high level kasuga 99.2 5.7E-11 2E-15 78.9 6.1 73 27-104 3-76 (252)
61 2avd_A Catechol-O-methyltransf 99.2 2.4E-10 8.1E-15 74.0 8.9 53 45-97 67-119 (229)
62 1i9g_A Hypothetical protein RV 99.2 2.8E-10 9.4E-15 75.8 9.4 64 30-95 84-147 (280)
63 1zq9_A Probable dimethyladenos 99.2 9.3E-11 3.2E-15 79.0 7.0 64 27-95 10-73 (285)
64 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.3E-10 4.3E-15 76.4 7.5 50 45-95 47-96 (246)
65 1nt2_A Fibrillarin-like PRE-rR 99.1 1.4E-10 4.8E-15 74.9 7.5 48 45-93 55-102 (210)
66 3evz_A Methyltransferase; NYSG 99.1 2.3E-10 7.9E-15 74.1 8.5 52 44-97 52-104 (230)
67 2h1r_A Dimethyladenosine trans 99.1 1.1E-10 3.9E-15 79.0 7.2 65 27-96 24-88 (299)
68 4dzr_A Protein-(glutamine-N5) 99.1 1.8E-10 6.2E-15 73.4 7.8 50 46-96 29-78 (215)
69 3ftd_A Dimethyladenosine trans 99.1 2E-11 6.9E-16 80.9 3.4 72 27-103 13-84 (249)
70 2h00_A Methyltransferase 10 do 99.1 3E-10 1E-14 74.7 9.1 50 47-97 65-114 (254)
71 2frn_A Hypothetical protein PH 99.1 2.7E-10 9.3E-15 76.3 8.8 52 45-98 123-174 (278)
72 3uwp_A Histone-lysine N-methyl 99.1 3E-10 1E-14 80.1 9.1 60 31-93 159-218 (438)
73 2gpy_A O-methyltransferase; st 99.1 4.1E-10 1.4E-14 73.2 9.1 67 28-97 37-103 (233)
74 2nxc_A L11 mtase, ribosomal pr 99.1 3.2E-10 1.1E-14 75.0 8.7 61 34-97 107-167 (254)
75 2pwy_A TRNA (adenine-N(1)-)-me 99.1 4.6E-10 1.6E-14 73.7 9.3 61 33-95 84-144 (258)
76 1wy7_A Hypothetical protein PH 99.1 8.7E-10 3E-14 70.3 10.4 68 27-96 28-96 (207)
77 1xxl_A YCGJ protein; structura 99.1 2.4E-10 8.4E-15 74.6 7.9 63 30-97 6-68 (239)
78 4hc4_A Protein arginine N-meth 99.1 1.8E-10 6.1E-15 80.4 7.6 50 46-98 82-131 (376)
79 2fhp_A Methylase, putative; al 99.1 9.4E-10 3.2E-14 68.8 10.3 65 30-97 28-92 (187)
80 1jsx_A Glucose-inhibited divis 99.1 3.7E-10 1.3E-14 71.9 8.5 64 33-97 50-114 (207)
81 3cbg_A O-methyltransferase; cy 99.1 3.6E-10 1.2E-14 73.8 8.6 53 45-97 70-122 (232)
82 2esr_A Methyltransferase; stru 99.1 2.8E-10 9.7E-15 71.0 7.7 64 31-97 16-79 (177)
83 2gb4_A Thiopurine S-methyltran 99.1 1.4E-10 4.7E-15 76.9 6.5 45 46-93 67-111 (252)
84 1l3i_A Precorrin-6Y methyltran 99.1 4.7E-10 1.6E-14 70.2 8.6 64 29-97 17-80 (192)
85 2bm8_A Cephalosporin hydroxyla 99.1 5.8E-11 2E-15 77.9 4.5 57 31-89 67-126 (236)
86 3ggd_A SAM-dependent methyltra 99.1 1.8E-10 6E-15 75.3 6.7 60 38-100 47-106 (245)
87 1ixk_A Methyltransferase; open 99.1 4.9E-10 1.7E-14 76.4 9.0 53 45-97 116-168 (315)
88 3bkx_A SAM-dependent methyltra 99.1 1.8E-10 6.1E-15 76.4 6.6 52 45-96 41-98 (275)
89 1vl5_A Unknown conserved prote 99.1 2.4E-10 8.2E-15 75.3 7.1 61 32-97 24-84 (260)
90 3hem_A Cyclopropane-fatty-acyl 99.1 3E-10 1E-14 76.5 7.7 51 45-97 70-120 (302)
91 3g5t_A Trans-aconitate 3-methy 99.1 4.7E-10 1.6E-14 75.5 8.6 51 45-95 34-84 (299)
92 3gdh_A Trimethylguanosine synt 99.1 5.3E-10 1.8E-14 72.9 8.6 61 33-97 65-125 (241)
93 3a27_A TYW2, uncharacterized p 99.1 4.1E-10 1.4E-14 75.3 8.0 53 45-98 117-169 (272)
94 3p2e_A 16S rRNA methylase; met 99.1 1.1E-10 3.6E-15 76.2 4.9 52 45-97 22-77 (225)
95 3tm4_A TRNA (guanine N2-)-meth 99.1 7.4E-10 2.5E-14 77.1 9.4 67 27-97 200-266 (373)
96 1ne2_A Hypothetical protein TA 99.1 6.4E-10 2.2E-14 70.7 8.4 63 29-93 32-95 (200)
97 1o54_A SAM-dependent O-methylt 99.1 9.2E-10 3.1E-14 73.4 9.4 61 35-97 102-162 (277)
98 3sm3_A SAM-dependent methyltra 99.1 4E-10 1.4E-14 72.7 7.5 52 44-98 27-78 (235)
99 3orh_A Guanidinoacetate N-meth 99.1 3E-10 1E-14 74.4 6.9 50 45-96 58-107 (236)
100 3id6_C Fibrillarin-like rRNA/T 99.1 8E-10 2.8E-14 72.6 8.9 60 32-91 60-120 (232)
101 3fpf_A Mtnas, putative unchara 99.1 5.7E-10 2E-14 75.6 8.3 52 45-97 120-171 (298)
102 3hnr_A Probable methyltransfer 99.1 4.4E-10 1.5E-14 72.1 7.4 54 35-93 35-88 (220)
103 3ckk_A TRNA (guanine-N(7)-)-me 99.1 2.9E-10 1E-14 74.6 6.4 49 45-94 44-92 (235)
104 2ipx_A RRNA 2'-O-methyltransfe 99.1 6.3E-10 2.1E-14 72.4 8.0 50 45-94 75-124 (233)
105 3m33_A Uncharacterized protein 99.1 6.9E-10 2.4E-14 72.0 8.1 48 41-91 42-89 (226)
106 4dcm_A Ribosomal RNA large sub 99.1 4.1E-10 1.4E-14 78.5 7.4 52 46-98 221-272 (375)
107 1fbn_A MJ fibrillarin homologu 99.1 3.8E-10 1.3E-14 73.4 6.9 50 45-95 72-121 (230)
108 3ajd_A Putative methyltransfer 99.1 5.4E-10 1.9E-14 74.7 7.8 54 45-98 81-134 (274)
109 1g8a_A Fibrillarin-like PRE-rR 99.1 4.3E-10 1.5E-14 72.8 7.0 51 45-95 71-121 (227)
110 3pfg_A N-methyltransferase; N, 99.1 3.8E-10 1.3E-14 74.5 6.8 58 33-93 36-93 (263)
111 3mq2_A 16S rRNA methyltransfer 99.1 2.2E-10 7.5E-15 73.7 5.4 52 35-89 17-68 (218)
112 3k6r_A Putative transferase PH 99.1 7.7E-10 2.6E-14 74.4 8.2 53 44-98 122-174 (278)
113 3g07_A 7SK snRNA methylphospha 99.1 8.8E-11 3E-15 79.1 3.5 50 46-96 45-94 (292)
114 1ve3_A Hypothetical protein PH 99.1 1.2E-09 4E-14 70.3 8.6 60 34-96 25-84 (227)
115 1yb2_A Hypothetical protein TA 99.0 4.1E-10 1.4E-14 75.1 6.6 51 45-95 108-158 (275)
116 3lpm_A Putative methyltransfer 99.0 4.9E-10 1.7E-14 74.1 7.0 51 45-97 46-97 (259)
117 1dus_A MJ0882; hypothetical pr 99.0 6.6E-10 2.3E-14 69.6 7.2 61 32-97 39-99 (194)
118 3l8d_A Methyltransferase; stru 99.0 3.5E-10 1.2E-14 73.6 6.0 61 37-100 43-103 (242)
119 3bus_A REBM, methyltransferase 99.0 8.7E-10 3E-14 73.0 8.0 50 45-96 59-108 (273)
120 2ozv_A Hypothetical protein AT 99.0 4.2E-10 1.4E-14 74.7 6.2 49 45-94 34-82 (260)
121 1uwv_A 23S rRNA (uracil-5-)-me 99.0 6.8E-10 2.3E-14 78.6 7.6 51 45-98 284-334 (433)
122 4fsd_A Arsenic methyltransfera 99.0 7.1E-10 2.4E-14 77.3 7.4 51 45-95 81-131 (383)
123 1zx0_A Guanidinoacetate N-meth 99.0 8.3E-10 2.8E-14 71.9 7.3 50 45-96 58-107 (236)
124 2o57_A Putative sarcosine dime 99.0 1.7E-09 5.8E-14 72.5 8.8 50 45-96 80-129 (297)
125 4hg2_A Methyltransferase type 99.0 2.6E-10 8.9E-15 75.8 4.7 51 37-90 29-79 (257)
126 2xvm_A Tellurite resistance pr 99.0 1.1E-09 3.7E-14 69.1 7.3 57 36-97 23-79 (199)
127 3dlc_A Putative S-adenosyl-L-m 99.0 1E-09 3.4E-14 70.1 7.2 47 49-97 45-91 (219)
128 4azs_A Methyltransferase WBDD; 99.0 1.2E-09 4.1E-14 79.7 8.4 49 45-96 64-112 (569)
129 1kpg_A CFA synthase;, cyclopro 99.0 9.8E-10 3.3E-14 73.3 7.3 50 45-96 62-111 (287)
130 3f4k_A Putative methyltransfer 99.0 1.3E-09 4.5E-14 71.4 7.7 51 45-97 44-94 (257)
131 3kkz_A Uncharacterized protein 99.0 1.1E-09 3.6E-14 72.5 7.1 51 45-97 44-94 (267)
132 3m6w_A RRNA methylase; rRNA me 99.0 1.4E-09 4.9E-14 77.7 8.2 65 32-98 88-152 (464)
133 3ocj_A Putative exported prote 99.0 9.2E-10 3.2E-14 74.3 6.9 56 42-97 113-168 (305)
134 3thr_A Glycine N-methyltransfe 99.0 1.7E-09 5.7E-14 72.3 8.1 57 32-93 44-100 (293)
135 2pxx_A Uncharacterized protein 99.0 1.3E-09 4.4E-14 69.5 7.2 56 37-94 32-87 (215)
136 2b9e_A NOL1/NOP2/SUN domain fa 99.0 1.6E-09 5.6E-14 73.8 8.0 60 37-98 94-153 (309)
137 3g2m_A PCZA361.24; SAM-depende 99.0 1.5E-09 5E-14 73.0 7.7 48 46-96 81-128 (299)
138 3m70_A Tellurite resistance pr 99.0 1.8E-09 6.2E-14 72.0 8.1 58 35-97 110-167 (286)
139 2p7i_A Hypothetical protein; p 99.0 7.1E-10 2.4E-14 72.0 5.9 58 33-94 29-86 (250)
140 3adn_A Spermidine synthase; am 99.0 1.9E-09 6.4E-14 73.0 8.1 49 46-95 82-130 (294)
141 3m4x_A NOL1/NOP2/SUN family pr 99.0 1.5E-09 5.3E-14 77.4 7.9 63 35-99 95-157 (456)
142 3bt7_A TRNA (uracil-5-)-methyl 99.0 2.1E-09 7.2E-14 74.6 8.5 61 35-98 200-261 (369)
143 1o9g_A RRNA methyltransferase; 99.0 6.7E-09 2.3E-13 68.2 10.4 48 47-95 51-100 (250)
144 3bzb_A Uncharacterized protein 99.0 1.5E-09 5E-14 72.8 7.3 46 46-93 78-124 (281)
145 2fyt_A Protein arginine N-meth 99.0 2.3E-09 7.9E-14 73.7 8.4 50 45-97 62-111 (340)
146 1y8c_A S-adenosylmethionine-de 99.0 2.2E-09 7.5E-14 69.7 8.0 61 33-96 23-83 (246)
147 3mgg_A Methyltransferase; NYSG 99.0 1.7E-09 5.7E-14 71.8 7.5 52 45-97 35-86 (276)
148 3gu3_A Methyltransferase; alph 99.0 1E-09 3.4E-14 73.5 6.4 64 32-96 8-71 (284)
149 2frx_A Hypothetical protein YE 99.0 2.8E-09 9.7E-14 76.4 9.1 52 47-98 117-168 (479)
150 2vdw_A Vaccinia virus capping 99.0 1.1E-09 3.8E-14 74.3 6.6 48 47-96 48-95 (302)
151 2fk8_A Methoxy mycolic acid sy 99.0 1.3E-09 4.5E-14 73.8 6.8 50 45-96 88-137 (318)
152 2jjq_A Uncharacterized RNA met 99.0 2.7E-09 9.4E-14 75.5 8.7 62 32-97 276-337 (425)
153 3bxo_A N,N-dimethyltransferase 99.0 3.4E-09 1.2E-13 68.6 8.5 55 35-92 28-82 (239)
154 3g5l_A Putative S-adenosylmeth 99.0 4E-10 1.4E-14 73.9 4.1 52 47-100 44-95 (253)
155 3ujc_A Phosphoethanolamine N-m 99.0 4.5E-10 1.5E-14 73.8 4.3 48 45-94 53-100 (266)
156 1wzn_A SAM-dependent methyltra 99.0 2.1E-09 7E-14 70.4 7.4 48 46-96 40-87 (252)
157 4htf_A S-adenosylmethionine-de 99.0 3.3E-09 1.1E-13 70.7 8.5 50 45-97 66-115 (285)
158 3vc1_A Geranyl diphosphate 2-C 99.0 2.3E-09 7.8E-14 72.6 7.8 50 46-97 116-165 (312)
159 3e23_A Uncharacterized protein 99.0 2.7E-09 9.1E-14 68.2 7.6 46 44-92 40-85 (211)
160 3d2l_A SAM-dependent methyltra 99.0 3.1E-09 1.1E-13 69.0 8.0 56 37-96 23-78 (243)
161 3q7e_A Protein arginine N-meth 99.0 2.4E-09 8.4E-14 73.8 7.7 50 45-97 64-113 (349)
162 3r0q_C Probable protein argini 99.0 1.8E-09 6E-14 75.2 7.0 50 45-97 61-110 (376)
163 3q87_B N6 adenine specific DNA 99.0 1.9E-09 6.4E-14 67.3 6.4 51 33-87 9-59 (170)
164 1g6q_1 HnRNP arginine N-methyl 98.9 4.6E-09 1.6E-13 71.9 8.8 50 45-97 36-85 (328)
165 3dtn_A Putative methyltransfer 98.9 2.1E-09 7.3E-14 69.6 6.6 49 46-95 43-91 (234)
166 2yvl_A TRMI protein, hypotheti 98.9 5.7E-09 1.9E-13 68.1 8.6 50 45-97 89-138 (248)
167 3bgv_A MRNA CAP guanine-N7 met 98.9 5.7E-09 1.9E-13 70.6 8.8 59 35-95 22-80 (313)
168 3dmg_A Probable ribosomal RNA 98.9 3.7E-09 1.2E-13 73.9 8.0 60 35-97 217-280 (381)
169 2avn_A Ubiquinone/menaquinone 98.9 4E-09 1.4E-13 69.6 7.8 55 36-93 43-97 (260)
170 4dmg_A Putative uncharacterize 98.9 4.4E-09 1.5E-13 73.8 8.3 55 41-98 208-262 (393)
171 3ege_A Putative methyltransfer 98.9 5.5E-10 1.9E-14 73.9 3.5 57 31-92 20-76 (261)
172 2y1w_A Histone-arginine methyl 98.9 5E-09 1.7E-13 72.2 8.4 50 45-97 48-97 (348)
173 3htx_A HEN1; HEN1, small RNA m 98.9 4E-09 1.4E-13 79.7 8.4 59 34-94 710-768 (950)
174 3ldu_A Putative methylase; str 98.9 4.2E-09 1.4E-13 73.7 8.0 70 27-98 177-283 (385)
175 2igt_A SAM dependent methyltra 98.9 6.6E-09 2.3E-13 71.4 8.8 49 46-97 152-200 (332)
176 3ofk_A Nodulation protein S; N 98.9 1.2E-09 4E-14 70.1 4.7 48 45-95 49-96 (216)
177 2pjd_A Ribosomal RNA small sub 98.9 1.2E-09 4.1E-14 75.1 5.1 61 34-97 185-245 (343)
178 3ccf_A Cyclopropane-fatty-acyl 98.9 3.5E-09 1.2E-13 70.5 7.1 54 34-92 46-99 (279)
179 2p35_A Trans-aconitate 2-methy 98.9 2.3E-09 7.8E-14 70.3 5.9 46 45-91 31-76 (259)
180 3lcc_A Putative methyl chlorid 98.9 1.6E-09 5.3E-14 70.4 5.1 46 47-95 66-111 (235)
181 2yqz_A Hypothetical protein TT 98.9 3.7E-09 1.3E-13 69.3 6.8 59 31-92 20-81 (263)
182 2p8j_A S-adenosylmethionine-de 98.9 1.2E-08 4E-13 64.9 9.0 62 32-96 9-70 (209)
183 3bkw_A MLL3908 protein, S-aden 98.9 1.7E-09 5.7E-14 70.3 5.1 53 46-100 42-94 (243)
184 3ldg_A Putative uncharacterize 98.9 1.3E-08 4.3E-13 71.3 9.6 72 25-98 174-282 (384)
185 2b78_A Hypothetical protein SM 98.9 6E-09 2E-13 72.8 8.0 51 46-98 211-261 (385)
186 3e8s_A Putative SAM dependent 98.9 4.8E-09 1.7E-13 67.2 6.9 51 36-91 43-93 (227)
187 2kw5_A SLR1183 protein; struct 98.9 5.5E-09 1.9E-13 66.2 7.0 48 45-96 28-75 (202)
188 3opn_A Putative hemolysin; str 98.9 2E-09 6.8E-14 70.6 4.9 45 47-93 37-81 (232)
189 3i9f_A Putative type 11 methyl 98.9 2.4E-09 8.3E-14 66.2 5.0 50 37-91 9-58 (170)
190 2g72_A Phenylethanolamine N-me 98.9 3.3E-09 1.1E-13 71.0 6.0 45 47-93 71-115 (289)
191 3b3j_A Histone-arginine methyl 98.9 6.9E-09 2.3E-13 74.5 7.9 49 46-97 157-205 (480)
192 2yxl_A PH0851 protein, 450AA l 98.9 1.1E-08 3.7E-13 72.8 8.9 54 45-98 257-310 (450)
193 2r6z_A UPF0341 protein in RSP 98.9 2.3E-09 8E-14 71.3 4.8 50 45-97 81-137 (258)
194 3k0b_A Predicted N6-adenine-sp 98.9 1.1E-08 3.6E-13 71.8 8.4 72 25-98 181-289 (393)
195 2ex4_A Adrenal gland protein A 98.9 3.2E-09 1.1E-13 69.2 5.4 47 47-95 79-125 (241)
196 3lcv_B Sisomicin-gentamicin re 98.9 2.4E-09 8.4E-14 71.4 4.7 53 45-98 130-182 (281)
197 3bwc_A Spermidine synthase; SA 98.9 1.8E-08 6.2E-13 68.3 9.1 48 46-94 94-141 (304)
198 1ri5_A MRNA capping enzyme; me 98.9 1.1E-08 3.8E-13 68.2 8.0 50 45-96 62-111 (298)
199 1uir_A Polyamine aminopropyltr 98.9 1.7E-08 5.9E-13 68.7 8.9 48 46-94 76-123 (314)
200 2f8l_A Hypothetical protein LM 98.9 1.3E-08 4.5E-13 69.9 8.4 73 24-96 105-183 (344)
201 1xtp_A LMAJ004091AAA; SGPP, st 98.9 6.4E-09 2.2E-13 67.9 6.5 47 46-94 92-138 (254)
202 1p91_A Ribosomal RNA large sub 98.8 1.7E-08 5.7E-13 66.8 8.5 56 36-92 73-129 (269)
203 1yub_A Ermam, rRNA methyltrans 98.8 1.2E-10 4.1E-15 76.6 -1.9 62 27-93 11-72 (245)
204 1xj5_A Spermidine synthase 1; 98.8 1.7E-08 5.8E-13 69.4 8.8 48 46-94 119-166 (334)
205 2a14_A Indolethylamine N-methy 98.8 1.7E-09 5.7E-14 71.8 3.5 47 46-94 54-100 (263)
206 2pt6_A Spermidine synthase; tr 98.8 1.7E-08 5.9E-13 69.0 8.6 48 46-94 115-162 (321)
207 3h2b_A SAM-dependent methyltra 98.8 9.5E-09 3.3E-13 65.2 6.7 44 47-93 41-84 (203)
208 2gs9_A Hypothetical protein TT 98.8 2.2E-08 7.5E-13 63.8 8.3 50 38-92 27-76 (211)
209 3dli_A Methyltransferase; PSI- 98.8 5.8E-09 2E-13 68.0 5.6 44 45-91 39-82 (240)
210 3cgg_A SAM-dependent methyltra 98.8 1.2E-08 4.2E-13 63.8 6.8 46 45-93 44-89 (195)
211 3frh_A 16S rRNA methylase; met 98.8 1.7E-08 5.9E-13 66.6 7.6 49 46-98 104-152 (253)
212 1iy9_A Spermidine synthase; ro 98.8 2.5E-08 8.5E-13 66.8 8.6 48 46-94 74-121 (275)
213 1inl_A Spermidine synthase; be 98.8 2.9E-08 9.7E-13 67.1 8.8 48 46-94 89-136 (296)
214 3ll7_A Putative methyltransfer 98.8 7.8E-09 2.7E-13 72.9 6.1 47 46-95 92-138 (410)
215 2as0_A Hypothetical protein PH 98.8 2.4E-08 8.1E-13 69.9 8.3 52 45-98 215-266 (396)
216 2i7c_A Spermidine synthase; tr 98.8 2.9E-08 9.9E-13 66.7 8.5 49 46-95 77-125 (283)
217 2qm3_A Predicted methyltransfe 98.8 5E-08 1.7E-12 67.8 9.8 49 47-97 172-220 (373)
218 3c0k_A UPF0064 protein YCCW; P 98.8 1.5E-08 5.1E-13 70.9 7.2 50 46-97 219-268 (396)
219 3ou2_A SAM-dependent methyltra 98.8 1.3E-08 4.6E-13 64.9 6.4 52 35-90 35-86 (218)
220 1x19_A CRTF-related protein; m 98.8 2.5E-08 8.7E-13 68.7 8.0 51 45-97 188-238 (359)
221 2i62_A Nicotinamide N-methyltr 98.8 5.3E-09 1.8E-13 68.7 4.4 48 46-95 55-102 (265)
222 2r3s_A Uncharacterized protein 98.8 4.6E-08 1.6E-12 66.5 9.0 49 46-96 164-212 (335)
223 2b2c_A Spermidine synthase; be 98.8 4.1E-08 1.4E-12 67.0 8.6 49 46-95 107-155 (314)
224 1mjf_A Spermidine synthase; sp 98.8 4.2E-08 1.4E-12 65.8 8.4 46 45-92 73-118 (281)
225 2o07_A Spermidine synthase; st 98.8 4.6E-08 1.6E-12 66.4 8.7 48 46-94 94-141 (304)
226 2ih2_A Modification methylase 98.8 3.9E-09 1.3E-13 73.9 3.2 64 23-88 17-80 (421)
227 3gjy_A Spermidine synthase; AP 98.8 3.8E-08 1.3E-12 67.3 7.9 45 49-94 91-135 (317)
228 1sqg_A SUN protein, FMU protei 98.8 3.1E-08 1.1E-12 70.0 7.8 66 29-97 230-295 (429)
229 1wxx_A TT1595, hypothetical pr 98.7 1.2E-08 4E-13 71.2 5.5 49 47-98 209-257 (382)
230 2aot_A HMT, histamine N-methyl 98.7 1.6E-08 5.4E-13 67.8 5.9 48 47-94 52-104 (292)
231 1qzz_A RDMB, aclacinomycin-10- 98.7 4.5E-08 1.5E-12 67.6 8.0 49 46-96 181-229 (374)
232 2qe6_A Uncharacterized protein 98.7 8.3E-08 2.8E-12 64.2 8.9 45 48-93 78-125 (274)
233 2okc_A Type I restriction enzy 98.7 5.4E-08 1.9E-12 69.1 8.3 72 24-97 150-233 (445)
234 2yx1_A Hypothetical protein MJ 98.7 2.1E-08 7.1E-13 68.9 6.0 49 45-97 193-241 (336)
235 1af7_A Chemotaxis receptor met 98.7 4.6E-08 1.6E-12 65.6 7.5 46 47-92 105-157 (274)
236 4e2x_A TCAB9; kijanose, tetron 98.7 1.6E-08 5.4E-13 70.9 5.2 43 46-91 106-148 (416)
237 3hp7_A Hemolysin, putative; st 98.7 6.9E-09 2.4E-13 70.2 3.2 42 47-90 85-126 (291)
238 3v97_A Ribosomal RNA large sub 98.7 8.2E-08 2.8E-12 71.7 9.1 73 24-98 169-282 (703)
239 2dul_A N(2),N(2)-dimethylguano 98.7 8.2E-08 2.8E-12 67.0 8.6 48 47-95 47-94 (378)
240 3gwz_A MMCR; methyltransferase 98.7 1E-07 3.4E-12 66.1 8.8 49 46-96 201-249 (369)
241 1tw3_A COMT, carminomycin 4-O- 98.7 7.5E-08 2.6E-12 66.2 8.0 49 46-96 182-230 (360)
242 3v97_A Ribosomal RNA large sub 98.7 4.6E-08 1.6E-12 73.0 7.3 51 46-98 538-588 (703)
243 2plw_A Ribosomal RNA methyltra 98.7 2.1E-08 7.1E-13 63.5 4.6 39 45-83 20-59 (201)
244 3dp7_A SAM-dependent methyltra 98.7 7.4E-08 2.5E-12 66.6 7.7 49 46-96 178-226 (363)
245 2zig_A TTHA0409, putative modi 98.7 9.9E-08 3.4E-12 64.5 8.1 48 45-95 233-280 (297)
246 2nyu_A Putative ribosomal RNA 98.7 3.4E-08 1.2E-12 62.2 5.2 39 45-83 20-66 (196)
247 2ar0_A M.ecoki, type I restric 98.6 8.4E-08 2.9E-12 69.8 7.1 73 24-98 148-237 (541)
248 3mcz_A O-methyltransferase; ad 98.6 1.2E-07 4.1E-12 65.0 7.6 47 48-96 180-226 (352)
249 3axs_A Probable N(2),N(2)-dime 98.6 7E-08 2.4E-12 67.7 6.5 53 46-98 51-103 (392)
250 1wg8_A Predicted S-adenosylmet 98.6 8.8E-08 3E-12 64.4 6.2 58 31-94 8-65 (285)
251 3i53_A O-methyltransferase; CO 98.6 1.7E-07 5.9E-12 63.8 7.7 48 47-96 169-216 (332)
252 3cc8_A Putative methyltransfer 98.6 6E-08 2.1E-12 62.1 5.0 44 46-92 31-74 (230)
253 1ej0_A FTSJ; methyltransferase 98.6 7.6E-08 2.6E-12 59.1 5.2 41 45-86 20-60 (180)
254 2oyr_A UPF0341 protein YHIQ; a 98.6 1.5E-07 5.1E-12 62.7 6.7 47 45-94 84-132 (258)
255 2ip2_A Probable phenazine-spec 98.6 1.1E-07 3.8E-12 64.7 6.0 46 49-96 169-214 (334)
256 1i4w_A Mitochondrial replicati 98.5 2.9E-07 9.9E-12 63.8 7.7 78 26-106 33-116 (353)
257 3dou_A Ribosomal RNA large sub 98.5 1.6E-07 5.5E-12 59.7 5.9 36 45-83 23-58 (191)
258 2cmg_A Spermidine synthase; tr 98.5 7.1E-08 2.4E-12 64.3 4.1 46 46-94 71-116 (262)
259 3giw_A Protein of unknown func 98.5 3.5E-07 1.2E-11 61.4 7.2 47 48-94 79-127 (277)
260 1g60_A Adenine-specific methyl 98.5 6E-07 2E-11 59.6 7.9 50 45-97 210-259 (260)
261 1vlm_A SAM-dependent methyltra 98.5 3.6E-07 1.2E-11 58.7 5.9 38 47-91 47-84 (219)
262 3lkd_A Type I restriction-modi 98.4 7.4E-07 2.5E-11 64.9 8.0 74 24-97 196-273 (542)
263 3khk_A Type I restriction-modi 98.4 3.5E-07 1.2E-11 66.6 6.1 72 24-98 224-309 (544)
264 3tka_A Ribosomal RNA small sub 98.4 1.9E-07 6.5E-12 64.2 3.7 55 33-89 45-99 (347)
265 2qfm_A Spermine synthase; sper 98.4 7.4E-07 2.5E-11 61.9 6.5 46 47-94 188-233 (364)
266 2k4m_A TR8_protein, UPF0146 pr 98.4 9E-07 3.1E-11 54.1 5.7 54 31-86 19-73 (153)
267 3s1s_A Restriction endonucleas 98.3 8.4E-07 2.9E-11 67.1 5.8 71 23-93 293-371 (878)
268 2oxt_A Nucleoside-2'-O-methylt 98.3 4.9E-07 1.7E-11 60.3 3.8 34 45-82 72-105 (265)
269 3sso_A Methyltransferase; macr 98.3 3.5E-07 1.2E-11 64.4 3.0 40 45-84 214-259 (419)
270 2wa2_A Non-structural protein 98.3 3.3E-07 1.1E-11 61.5 2.6 36 45-85 80-115 (276)
271 3cvo_A Methyltransferase-like 98.2 2.8E-06 9.6E-11 54.6 6.0 49 45-97 28-76 (202)
272 1fp2_A Isoflavone O-methyltran 98.2 8E-07 2.8E-11 61.0 3.7 44 45-90 186-229 (352)
273 3ufb_A Type I restriction-modi 98.2 4E-06 1.4E-10 60.9 7.3 73 24-98 196-280 (530)
274 4gqb_A Protein arginine N-meth 98.2 5.7E-06 1.9E-10 61.2 7.0 56 49-109 359-417 (637)
275 3reo_A (ISO)eugenol O-methyltr 98.1 2.1E-06 7.2E-11 59.5 4.0 43 46-90 202-244 (368)
276 3ua3_A Protein arginine N-meth 98.1 9.2E-06 3.2E-10 60.7 7.1 46 48-93 410-467 (745)
277 1fp1_D Isoliquiritigenin 2'-O- 98.1 3.3E-06 1.1E-10 58.4 4.2 43 46-90 208-250 (372)
278 4a6d_A Hydroxyindole O-methylt 98.1 6.7E-06 2.3E-10 56.7 5.5 47 46-94 178-224 (353)
279 3p9c_A Caffeic acid O-methyltr 98.0 3.6E-06 1.2E-10 58.3 4.0 43 46-90 200-242 (364)
280 3lst_A CALO1 methyltransferase 98.0 5.4E-06 1.9E-10 56.9 4.6 40 45-86 182-221 (348)
281 2p41_A Type II methyltransfera 98.0 3.3E-06 1.1E-10 57.3 3.2 32 45-80 80-111 (305)
282 1zg3_A Isoflavanone 4'-O-methy 98.0 4.1E-06 1.4E-10 57.6 3.6 43 46-90 192-234 (358)
283 2py6_A Methyltransferase FKBM; 97.9 3.7E-05 1.3E-09 54.1 7.7 49 46-94 225-274 (409)
284 2zfu_A Nucleomethylin, cerebra 97.9 7.2E-06 2.5E-10 52.2 3.7 40 37-83 58-97 (215)
285 4fzv_A Putative methyltransfer 97.9 4.4E-05 1.5E-09 53.0 7.3 54 45-99 146-199 (359)
286 3o4f_A Spermidine synthase; am 97.8 0.00019 6.6E-09 48.5 9.4 62 46-108 82-143 (294)
287 2xyq_A Putative 2'-O-methyl tr 97.8 2.1E-05 7.3E-10 53.1 4.1 37 45-83 61-103 (290)
288 1boo_A Protein (N-4 cytosine-s 97.8 7.5E-05 2.6E-09 51.0 6.6 59 32-96 240-298 (323)
289 1eg2_A Modification methylase 97.7 0.00019 6.6E-09 49.0 7.4 60 31-96 229-291 (319)
290 2wk1_A NOVP; transferase, O-me 97.6 0.00039 1.3E-08 46.7 7.6 52 46-97 105-186 (282)
291 2qy6_A UPF0209 protein YFCK; s 97.5 0.00019 6.6E-09 47.6 5.6 36 47-82 60-106 (257)
292 4auk_A Ribosomal RNA large sub 97.1 0.00061 2.1E-08 47.5 4.2 35 45-82 209-243 (375)
293 3p8z_A Mtase, non-structural p 96.9 0.00073 2.5E-08 44.5 3.5 38 45-83 76-113 (267)
294 3lkz_A Non-structural protein 96.9 0.00063 2.2E-08 46.1 2.9 38 45-83 92-129 (321)
295 3gcz_A Polyprotein; flavivirus 96.9 0.00099 3.4E-08 44.7 3.7 38 45-83 88-125 (282)
296 1g55_A DNA cytosine methyltran 96.8 0.0026 9E-08 43.7 5.9 46 49-94 3-48 (343)
297 2c7p_A Modification methylase 96.8 0.0037 1.3E-07 42.8 6.4 45 48-94 11-55 (327)
298 3evf_A RNA-directed RNA polyme 96.8 0.0012 4E-08 44.3 3.8 38 45-83 72-109 (277)
299 3c6k_A Spermine synthase; sper 96.7 0.0045 1.5E-07 43.3 6.3 46 47-94 205-250 (381)
300 3g7u_A Cytosine-specific methy 96.6 0.0058 2E-07 42.6 6.2 44 49-94 3-46 (376)
301 3eld_A Methyltransferase; flav 96.4 0.0058 2E-07 41.3 4.9 39 44-83 78-116 (300)
302 3qv2_A 5-cytosine DNA methyltr 95.8 0.021 7.1E-07 39.1 5.5 48 47-94 9-57 (327)
303 2px2_A Genome polyprotein [con 95.8 0.0012 4E-08 43.9 -0.6 36 44-79 70-108 (269)
304 2ld4_A Anamorsin; methyltransf 95.7 0.0017 5.8E-08 39.9 -0.0 33 45-94 10-42 (176)
305 4f3n_A Uncharacterized ACR, CO 95.7 0.027 9.2E-07 40.0 6.0 47 48-94 138-188 (432)
306 2qrv_A DNA (cytosine-5)-methyl 95.7 0.032 1.1E-06 37.7 6.1 46 47-93 15-61 (295)
307 3ubt_Y Modification methylase 95.6 0.019 6.4E-07 38.8 4.8 43 49-93 1-43 (331)
308 4h0n_A DNMT2; SAH binding, tra 95.4 0.042 1.4E-06 37.6 5.9 45 49-94 4-49 (333)
309 1zkd_A DUF185; NESG, RPR58, st 95.2 0.17 5.7E-06 35.5 8.6 46 49-94 82-133 (387)
310 2dph_A Formaldehyde dismutase; 95.2 0.045 1.5E-06 38.0 5.6 45 45-90 183-228 (398)
311 3b5i_A S-adenosyl-L-methionine 94.9 0.019 6.3E-07 40.1 3.1 41 48-88 53-107 (374)
312 1pl8_A Human sorbitol dehydrog 94.8 0.12 4E-06 35.3 6.8 45 45-90 169-214 (356)
313 1f8f_A Benzyl alcohol dehydrog 94.8 0.094 3.2E-06 35.9 6.3 46 45-91 188-234 (371)
314 3s2e_A Zinc-containing alcohol 94.7 0.1 3.5E-06 35.3 6.4 44 45-90 164-208 (340)
315 1kol_A Formaldehyde dehydrogen 94.7 0.093 3.2E-06 36.3 6.2 45 45-90 183-228 (398)
316 2efj_A 3,7-dimethylxanthine me 94.6 0.047 1.6E-06 38.2 4.4 34 48-81 53-102 (384)
317 3me5_A Cytosine-specific methy 94.4 0.062 2.1E-06 38.7 4.8 42 49-92 89-130 (482)
318 1e3j_A NADP(H)-dependent ketos 94.2 0.19 6.6E-06 34.1 6.8 44 45-90 166-210 (352)
319 2oo3_A Protein involved in cat 94.0 0.012 4.2E-07 39.5 0.6 55 35-94 81-135 (283)
320 3two_A Mannitol dehydrogenase; 94.0 0.094 3.2E-06 35.6 4.9 44 45-90 174-218 (348)
321 3m6i_A L-arabinitol 4-dehydrog 93.9 0.17 5.9E-06 34.5 6.1 46 45-91 177-223 (363)
322 3fpc_A NADP-dependent alcohol 93.8 0.12 4.1E-06 35.2 5.2 46 45-91 164-210 (352)
323 1p0f_A NADP-dependent alcohol 93.7 0.14 4.8E-06 35.1 5.4 45 45-90 189-234 (373)
324 3uog_A Alcohol dehydrogenase; 93.6 0.2 6.8E-06 34.3 6.0 45 45-91 187-232 (363)
325 4ej6_A Putative zinc-binding d 93.6 0.27 9.3E-06 33.7 6.8 46 45-91 180-226 (370)
326 1uuf_A YAHK, zinc-type alcohol 93.6 0.15 5.1E-06 35.1 5.4 44 45-90 192-236 (369)
327 3ado_A Lambda-crystallin; L-gu 93.6 0.14 4.8E-06 34.9 5.1 46 47-95 5-52 (319)
328 4dkj_A Cytosine-specific methy 93.4 0.12 4E-06 36.4 4.7 46 49-94 11-60 (403)
329 3ip1_A Alcohol dehydrogenase, 93.4 0.22 7.4E-06 34.6 6.1 46 45-91 211-257 (404)
330 3jv7_A ADH-A; dehydrogenase, n 93.4 0.24 8.2E-06 33.5 6.2 45 45-90 169-214 (345)
331 1e3i_A Alcohol dehydrogenase, 93.3 0.18 6.1E-06 34.6 5.4 45 45-90 193-238 (376)
332 4a2c_A Galactitol-1-phosphate 93.2 0.72 2.5E-05 31.0 8.3 45 45-90 158-203 (346)
333 3uko_A Alcohol dehydrogenase c 93.2 0.12 4E-06 35.6 4.4 45 45-90 191-236 (378)
334 1cdo_A Alcohol dehydrogenase; 93.1 0.2 7E-06 34.3 5.4 45 45-90 190-235 (374)
335 1rjw_A ADH-HT, alcohol dehydro 93.0 0.45 1.6E-05 32.1 7.1 44 45-90 162-206 (339)
336 2fzw_A Alcohol dehydrogenase c 93.0 0.21 7.1E-06 34.2 5.4 45 45-90 188-233 (373)
337 1vj0_A Alcohol dehydrogenase, 92.9 0.27 9.3E-06 33.8 5.9 45 45-90 193-238 (380)
338 1piw_A Hypothetical zinc-type 92.9 0.17 5.9E-06 34.5 4.8 44 45-90 177-221 (360)
339 4eez_A Alcohol dehydrogenase 1 92.8 0.45 1.5E-05 32.1 6.8 46 45-91 161-207 (348)
340 2h6e_A ADH-4, D-arabinose 1-de 92.8 0.28 9.6E-06 33.2 5.7 43 45-90 169-214 (344)
341 1h2b_A Alcohol dehydrogenase; 92.8 0.32 1.1E-05 33.2 6.0 44 45-90 184-229 (359)
342 2jhf_A Alcohol dehydrogenase E 92.7 0.25 8.5E-06 33.9 5.4 45 45-90 189-234 (374)
343 4ft4_B DNA (cytosine-5)-methyl 92.4 0.25 8.5E-06 37.4 5.5 47 47-93 211-261 (784)
344 3r24_A NSP16, 2'-O-methyl tran 92.4 0.22 7.6E-06 34.0 4.6 35 46-83 108-149 (344)
345 3goh_A Alcohol dehydrogenase, 92.2 0.18 6.1E-06 33.7 4.2 43 45-90 140-183 (315)
346 1rjd_A PPM1P, carboxy methyl t 91.8 1.2 4.1E-05 30.4 7.9 48 46-95 96-143 (334)
347 1m6e_X S-adenosyl-L-methionnin 91.7 0.051 1.7E-06 37.7 1.0 46 48-93 52-112 (359)
348 3gms_A Putative NADPH:quinone 91.4 0.28 9.6E-06 33.2 4.5 44 45-90 142-187 (340)
349 3swr_A DNA (cytosine-5)-methyl 91.4 0.42 1.4E-05 37.5 5.8 44 49-93 541-584 (1002)
350 3llv_A Exopolyphosphatase-rela 91.3 0.43 1.5E-05 27.8 4.7 40 49-90 7-47 (141)
351 1jvb_A NAD(H)-dependent alcoho 91.1 0.65 2.2E-05 31.4 6.0 44 45-90 168-214 (347)
352 3jyn_A Quinone oxidoreductase; 91.0 0.58 2E-05 31.4 5.7 44 45-90 138-183 (325)
353 2eih_A Alcohol dehydrogenase; 90.9 0.74 2.5E-05 31.1 6.1 44 45-90 164-209 (343)
354 3fwz_A Inner membrane protein 90.8 0.62 2.1E-05 27.3 5.1 41 48-90 7-48 (140)
355 1pqw_A Polyketide synthase; ro 90.6 0.45 1.6E-05 29.4 4.6 43 45-89 36-80 (198)
356 2hcy_A Alcohol dehydrogenase 1 90.5 0.51 1.7E-05 32.0 5.1 44 45-90 167-212 (347)
357 3pvc_A TRNA 5-methylaminomethy 90.5 0.26 8.7E-06 36.7 3.8 42 47-88 58-113 (689)
358 3qwb_A Probable quinone oxidor 90.3 0.72 2.5E-05 31.0 5.6 44 45-90 146-191 (334)
359 1v3u_A Leukotriene B4 12- hydr 90.2 0.7 2.4E-05 31.0 5.5 43 45-89 143-187 (333)
360 2c0c_A Zinc binding alcohol de 90.2 0.81 2.8E-05 31.2 5.9 44 45-90 161-206 (362)
361 3ps9_A TRNA 5-methylaminomethy 90.0 0.68 2.3E-05 34.3 5.7 41 49-89 68-122 (676)
362 2d8a_A PH0655, probable L-thre 89.6 0.69 2.4E-05 31.3 5.1 43 47-90 167-210 (348)
363 2b5w_A Glucose dehydrogenase; 89.6 0.68 2.3E-05 31.5 5.1 45 45-90 164-220 (357)
364 2cf5_A Atccad5, CAD, cinnamyl 89.5 0.76 2.6E-05 31.3 5.3 43 45-89 177-221 (357)
365 1iz0_A Quinone oxidoreductase; 89.4 0.43 1.5E-05 31.6 3.9 44 45-90 123-168 (302)
366 4b7c_A Probable oxidoreductase 89.3 0.61 2.1E-05 31.3 4.7 42 45-88 147-190 (336)
367 3iht_A S-adenosyl-L-methionine 89.0 2.2 7.5E-05 26.3 6.4 34 47-81 40-73 (174)
368 2j3h_A NADP-dependent oxidored 88.9 0.81 2.8E-05 30.8 5.1 44 45-90 153-198 (345)
369 3abi_A Putative uncharacterize 88.6 0.33 1.1E-05 33.3 3.0 43 47-91 15-57 (365)
370 3krt_A Crotonyl COA reductase; 88.5 1 3.6E-05 31.7 5.6 44 45-90 226-271 (456)
371 4eye_A Probable oxidoreductase 88.5 0.73 2.5E-05 31.2 4.6 44 45-90 157-202 (342)
372 3fbg_A Putative arginate lyase 88.4 1.3 4.4E-05 30.0 5.8 42 47-90 150-193 (346)
373 4dup_A Quinone oxidoreductase; 88.2 1.3 4.4E-05 30.1 5.7 44 45-90 165-210 (353)
374 3c85_A Putative glutathione-re 88.1 1.3 4.3E-05 27.0 5.2 40 48-89 39-80 (183)
375 4dio_A NAD(P) transhydrogenase 87.8 1.1 3.9E-05 31.5 5.3 42 47-90 189-231 (405)
376 1yb5_A Quinone oxidoreductase; 87.8 1.3 4.5E-05 30.1 5.5 44 45-90 168-213 (351)
377 1lss_A TRK system potassium up 87.7 1.8 6E-05 24.7 5.5 40 48-89 4-44 (140)
378 1yqd_A Sinapyl alcohol dehydro 87.4 1.3 4.6E-05 30.2 5.5 43 45-89 184-228 (366)
379 3p2y_A Alanine dehydrogenase/p 86.5 1.4 4.9E-05 30.8 5.2 42 47-90 183-225 (381)
380 3av4_A DNA (cytosine-5)-methyl 86.5 1.3 4.5E-05 35.8 5.5 46 47-93 850-895 (1330)
381 4dvj_A Putative zinc-dependent 86.3 1.2 4.2E-05 30.4 4.8 43 47-90 171-215 (363)
382 3vrd_B FCCB subunit, flavocyto 86.2 0.92 3.1E-05 31.1 4.1 35 47-82 1-37 (401)
383 2vhw_A Alanine dehydrogenase; 86.2 2.1 7.3E-05 29.5 6.0 42 47-90 167-209 (377)
384 3iup_A Putative NADPH:quinone 86.1 1.1 3.9E-05 30.7 4.5 43 46-90 169-214 (379)
385 1x13_A NAD(P) transhydrogenase 85.9 1.6 5.5E-05 30.5 5.2 40 47-88 171-211 (401)
386 4a0s_A Octenoyl-COA reductase/ 85.9 1.8 6.2E-05 30.3 5.6 44 45-90 218-263 (447)
387 3ce6_A Adenosylhomocysteinase; 85.8 2.1 7E-05 31.0 5.8 43 45-89 271-314 (494)
388 2cdc_A Glucose dehydrogenase g 85.6 1.6 5.6E-05 29.7 5.1 41 48-90 181-225 (366)
389 1qor_A Quinone oxidoreductase; 85.6 1.7 5.9E-05 29.0 5.1 44 45-90 138-183 (327)
390 3gaz_A Alcohol dehydrogenase s 85.5 2 6.9E-05 29.0 5.5 43 45-90 148-192 (343)
391 3ic5_A Putative saccharopine d 85.1 2.3 7.8E-05 23.4 4.9 40 48-89 5-46 (118)
392 2vn8_A Reticulon-4-interacting 84.9 2 7E-05 29.3 5.4 42 45-89 181-224 (375)
393 3tos_A CALS11; methyltransfera 84.7 3.7 0.00013 27.1 6.3 34 46-79 68-107 (257)
394 2dq4_A L-threonine 3-dehydroge 84.6 0.67 2.3E-05 31.3 2.8 43 47-90 164-207 (343)
395 3vyw_A MNMC2; tRNA wobble urid 84.6 1.5 5.1E-05 29.8 4.4 35 47-81 96-135 (308)
396 1wly_A CAAR, 2-haloacrylate re 84.2 3.1 0.00011 27.8 5.9 44 45-90 143-188 (333)
397 2g1u_A Hypothetical protein TM 84.1 2.1 7.3E-05 25.3 4.7 40 46-87 17-57 (155)
398 2j8z_A Quinone oxidoreductase; 84.0 2.4 8E-05 28.8 5.3 44 45-90 160-205 (354)
399 3vtf_A UDP-glucose 6-dehydroge 83.9 0.76 2.6E-05 32.8 2.9 37 49-89 22-61 (444)
400 1l7d_A Nicotinamide nucleotide 83.8 1.8 6E-05 30.0 4.7 41 47-89 171-212 (384)
401 1f0y_A HCDH, L-3-hydroxyacyl-C 83.7 2.7 9.2E-05 27.8 5.4 41 49-92 16-58 (302)
402 3tqh_A Quinone oxidoreductase; 83.4 3.1 0.00011 27.7 5.7 43 45-90 150-194 (321)
403 1pjc_A Protein (L-alanine dehy 83.2 4.1 0.00014 27.9 6.3 43 48-92 167-210 (361)
404 4e12_A Diketoreductase; oxidor 83.1 4.2 0.00014 26.7 6.1 41 49-92 5-47 (283)
405 3nx4_A Putative oxidoreductase 82.7 1.8 6.3E-05 28.8 4.3 39 50-90 149-189 (324)
406 4g65_A TRK system potassium up 82.3 2.4 8.4E-05 30.1 5.0 43 48-92 3-46 (461)
407 2dpo_A L-gulonate 3-dehydrogen 81.7 4 0.00014 27.6 5.7 41 49-92 7-49 (319)
408 3l9w_A Glutathione-regulated p 81.7 2.9 9.8E-05 29.4 5.1 41 48-90 4-45 (413)
409 2eez_A Alanine dehydrogenase; 81.5 4.5 0.00015 27.8 6.0 42 47-90 165-207 (369)
410 1tt7_A YHFP; alcohol dehydroge 81.3 1.3 4.3E-05 29.7 3.1 44 45-90 147-193 (330)
411 3mog_A Probable 3-hydroxybutyr 80.6 3.3 0.00011 29.7 5.2 42 49-93 6-49 (483)
412 1xa0_A Putative NADPH dependen 79.6 1.1 3.8E-05 29.9 2.4 44 45-90 146-192 (328)
413 3mag_A VP39; methylated adenin 79.4 6.7 0.00023 26.6 6.0 37 47-83 60-99 (307)
414 2zb4_A Prostaglandin reductase 78.9 4.7 0.00016 27.2 5.4 45 45-90 156-204 (357)
415 2aef_A Calcium-gated potassium 77.2 6.8 0.00023 24.7 5.5 41 47-89 8-48 (234)
416 1fmc_A 7 alpha-hydroxysteroid 76.9 10 0.00035 23.9 6.3 45 47-92 10-55 (255)
417 3gvp_A Adenosylhomocysteinase 76.9 7 0.00024 27.8 5.8 39 46-86 218-257 (435)
418 2dpm_A M.dpnii 1, protein (ade 76.5 7.3 0.00025 25.9 5.6 50 31-88 22-71 (284)
419 3l4b_C TRKA K+ channel protien 76.3 4.4 0.00015 25.3 4.3 38 50-89 2-40 (218)
420 1zcj_A Peroxisomal bifunctiona 76.1 7.3 0.00025 27.7 5.8 41 49-92 38-80 (463)
421 3lyl_A 3-oxoacyl-(acyl-carrier 75.5 11 0.00037 23.7 6.1 48 47-95 4-52 (247)
422 1jw9_B Molybdopterin biosynthe 75.5 8.3 0.00028 24.9 5.6 33 48-82 31-65 (249)
423 2g1p_A DNA adenine methylase; 74.4 4.3 0.00015 26.9 4.1 47 32-87 16-62 (278)
424 2hmt_A YUAA protein; RCK, KTN, 74.1 3.8 0.00013 23.3 3.4 39 48-88 6-45 (144)
425 3gqv_A Enoyl reductase; medium 73.9 6.2 0.00021 26.9 4.9 42 46-90 163-206 (371)
426 3ojo_A CAP5O; rossmann fold, c 73.6 2.9 0.0001 29.6 3.2 42 47-90 10-52 (431)
427 1yb1_A 17-beta-hydroxysteroid 73.5 14 0.00047 23.8 6.3 46 47-93 30-76 (272)
428 3ggo_A Prephenate dehydrogenas 72.8 10 0.00035 25.4 5.7 41 49-90 34-76 (314)
429 4fn4_A Short chain dehydrogena 72.7 17 0.00058 23.7 6.6 49 47-96 6-55 (254)
430 2yut_A Putative short-chain ox 72.0 14 0.00047 22.4 6.7 38 50-89 2-39 (207)
431 4fs3_A Enoyl-[acyl-carrier-pro 71.9 10 0.00036 24.3 5.4 48 47-94 5-54 (256)
432 1gu7_A Enoyl-[acyl-carrier-pro 71.5 9.9 0.00034 25.6 5.4 36 45-82 164-202 (364)
433 1xu9_A Corticosteroid 11-beta- 71.5 14 0.00048 23.9 6.0 45 47-92 27-72 (286)
434 3pi7_A NADH oxidoreductase; gr 71.2 7.6 0.00026 26.1 4.8 40 49-90 166-207 (349)
435 2y0c_A BCEC, UDP-glucose dehyd 71.0 8.1 0.00028 27.6 5.0 41 47-90 7-49 (478)
436 2g5c_A Prephenate dehydrogenas 70.0 14 0.00048 23.9 5.7 39 50-89 3-43 (281)
437 1wma_A Carbonyl reductase [NAD 69.7 17 0.00058 22.9 6.1 46 47-93 3-50 (276)
438 3zwc_A Peroxisomal bifunctiona 69.0 12 0.00042 28.4 5.8 43 49-94 317-361 (742)
439 1zej_A HBD-9, 3-hydroxyacyl-CO 68.9 9.2 0.00032 25.5 4.7 41 47-91 11-53 (293)
440 1o94_A Tmadh, trimethylamine d 68.8 13 0.00045 27.9 6.0 57 45-101 525-590 (729)
441 1mv8_A GMD, GDP-mannose 6-dehy 68.6 12 0.0004 26.3 5.4 38 50-90 2-41 (436)
442 1yxm_A Pecra, peroxisomal tran 68.5 19 0.00065 23.4 6.2 45 47-92 17-62 (303)
443 3h8v_A Ubiquitin-like modifier 68.3 12 0.00042 25.0 5.2 34 47-82 35-70 (292)
444 3d4o_A Dipicolinate synthase s 68.1 17 0.00057 24.0 5.9 40 47-88 154-194 (293)
445 2rir_A Dipicolinate synthase, 68.1 16 0.00055 24.1 5.8 39 47-87 156-195 (300)
446 3ek2_A Enoyl-(acyl-carrier-pro 67.5 14 0.00047 23.5 5.3 45 46-90 12-58 (271)
447 3n58_A Adenosylhomocysteinase; 67.4 15 0.00053 26.4 5.8 38 46-85 245-283 (464)
448 2ew2_A 2-dehydropantoate 2-red 67.3 17 0.00057 23.7 5.7 39 49-90 4-44 (316)
449 3gg2_A Sugar dehydrogenase, UD 67.3 14 0.00047 26.2 5.6 40 49-90 3-43 (450)
450 4e6p_A Probable sorbitol dehyd 67.2 19 0.00067 22.9 5.9 43 47-90 7-50 (259)
451 3e8x_A Putative NAD-dependent 67.0 12 0.00041 23.3 4.8 40 47-87 20-60 (236)
452 4ibo_A Gluconate dehydrogenase 66.9 15 0.0005 23.8 5.4 47 47-94 25-72 (271)
453 2qq5_A DHRS1, dehydrogenase/re 66.7 21 0.00071 22.7 6.0 44 48-92 5-49 (260)
454 1gpj_A Glutamyl-tRNA reductase 65.7 18 0.00061 25.1 5.8 39 46-85 165-204 (404)
455 2gn4_A FLAA1 protein, UDP-GLCN 65.2 13 0.00046 24.8 5.1 43 47-90 20-65 (344)
456 2wsb_A Galactitol dehydrogenas 64.6 23 0.0008 22.2 5.9 42 47-89 10-52 (254)
457 3dqp_A Oxidoreductase YLBE; al 64.5 16 0.00056 22.4 5.1 34 49-83 1-35 (219)
458 2wtb_A MFP2, fatty acid multif 64.0 10 0.00034 28.7 4.5 40 50-92 314-355 (725)
459 2f1k_A Prephenate dehydrogenas 63.5 20 0.0007 23.0 5.6 37 50-89 2-40 (279)
460 1dlj_A UDP-glucose dehydrogena 63.5 21 0.00071 24.8 5.8 38 50-89 2-39 (402)
461 3h2z_A Mannitol-1-phosphate 5- 62.9 15 0.0005 25.6 4.9 40 49-91 1-43 (382)
462 3nzo_A UDP-N-acetylglucosamine 62.7 29 0.00099 23.8 6.4 45 47-92 34-80 (399)
463 1lnq_A MTHK channels, potassiu 62.6 7 0.00024 26.2 3.2 39 48-89 115-153 (336)
464 3h9u_A Adenosylhomocysteinase; 62.5 22 0.00076 25.3 5.8 40 47-88 210-250 (436)
465 1zsy_A Mitochondrial 2-enoyl t 62.4 16 0.00055 24.6 5.0 36 45-81 165-202 (357)
466 2vz8_A Fatty acid synthase; tr 61.9 0.98 3.3E-05 38.7 -1.3 52 47-98 1240-1295(2512)
467 1leh_A Leucine dehydrogenase; 61.7 28 0.00095 24.0 6.1 39 47-87 172-211 (364)
468 1a5z_A L-lactate dehydrogenase 61.3 32 0.0011 23.0 6.3 39 50-89 2-42 (319)
469 2h78_A Hibadh, 3-hydroxyisobut 61.2 27 0.00092 22.8 5.9 39 49-90 4-44 (302)
470 3ktd_A Prephenate dehydrogenas 61.2 15 0.00052 25.0 4.7 38 49-89 9-48 (341)
471 1wdk_A Fatty oxidation complex 61.1 9.8 0.00034 28.7 4.0 41 49-92 315-357 (715)
472 1bg6_A N-(1-D-carboxylethyl)-L 60.8 25 0.00085 23.4 5.7 40 49-91 5-46 (359)
473 3oj0_A Glutr, glutamyl-tRNA re 60.5 22 0.00074 20.4 7.4 39 47-87 20-59 (144)
474 1ja9_A 4HNR, 1,3,6,8-tetrahydr 60.3 29 0.001 21.9 5.9 45 47-92 20-66 (274)
475 1yf3_A DNA adenine methylase; 60.3 9.1 0.00031 25.0 3.4 39 45-89 22-60 (259)
476 4g81_D Putative hexonate dehyd 60.3 25 0.00085 22.9 5.5 49 47-96 8-57 (255)
477 2gdz_A NAD+-dependent 15-hydro 60.1 28 0.00096 22.1 5.7 42 47-89 6-48 (267)
478 1lld_A L-lactate dehydrogenase 59.4 21 0.00073 23.5 5.2 38 48-86 7-46 (319)
479 4a7p_A UDP-glucose dehydrogena 59.3 4.2 0.00014 28.9 1.7 40 49-90 9-49 (446)
480 1id1_A Putative potassium chan 59.1 24 0.00081 20.5 5.6 39 48-88 3-43 (153)
481 3pid_A UDP-glucose 6-dehydroge 58.9 12 0.0004 26.6 3.9 42 47-90 35-76 (432)
482 1y1p_A ARII, aldehyde reductas 58.9 35 0.0012 22.2 6.1 42 47-89 10-52 (342)
483 3ius_A Uncharacterized conserv 58.7 23 0.0008 22.6 5.2 36 49-86 6-42 (286)
484 3ond_A Adenosylhomocysteinase; 58.1 29 0.00098 25.1 5.8 40 46-89 263-305 (488)
485 2v6b_A L-LDH, L-lactate dehydr 58.0 22 0.00075 23.6 5.0 37 50-86 2-39 (304)
486 3hyw_A Sulfide-quinone reducta 57.8 13 0.00043 25.8 3.9 33 49-82 3-37 (430)
487 4a27_A Synaptic vesicle membra 57.7 12 0.00042 25.1 3.8 41 45-87 140-182 (349)
488 2cfc_A 2-(R)-hydroxypropyl-COM 57.3 32 0.0011 21.4 5.8 40 49-89 3-43 (250)
489 1vpd_A Tartronate semialdehyde 57.0 36 0.0012 22.0 5.9 38 49-89 6-45 (299)
490 3k30_A Histamine dehydrogenase 56.6 30 0.001 25.7 5.9 58 45-102 520-587 (690)
491 3b1f_A Putative prephenate deh 56.1 35 0.0012 22.1 5.7 40 49-89 7-48 (290)
492 3e9n_A Putative short-chain de 56.1 34 0.0012 21.4 6.0 41 47-88 4-44 (245)
493 3rui_A Ubiquitin-like modifier 56.0 18 0.00061 24.9 4.3 34 47-82 33-68 (340)
494 3grk_A Enoyl-(acyl-carrier-pro 55.8 40 0.0014 22.0 6.2 46 47-92 30-77 (293)
495 3g0o_A 3-hydroxyisobutyrate de 55.6 33 0.0011 22.5 5.6 40 48-90 7-48 (303)
496 3pqe_A L-LDH, L-lactate dehydr 55.5 30 0.001 23.4 5.4 41 47-87 4-45 (326)
497 3k31_A Enoyl-(acyl-carrier-pro 55.4 33 0.0011 22.4 5.5 46 47-92 29-76 (296)
498 4gx0_A TRKA domain protein; me 55.2 19 0.00066 25.9 4.6 41 49-91 128-169 (565)
499 3vku_A L-LDH, L-lactate dehydr 55.2 32 0.0011 23.3 5.5 42 46-87 7-49 (326)
500 4dll_A 2-hydroxy-3-oxopropiona 54.8 35 0.0012 22.7 5.6 40 47-89 30-71 (320)
No 1
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.73 E-value=5.2e-17 Score=105.56 Aligned_cols=96 Identities=50% Similarity=0.831 Sum_probs=84.7
Q ss_pred CCcCCCCCcccCCCCCCCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhC----CCcEEE
Q psy5585 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMG----EHGKAV 76 (110)
Q Consensus 1 ~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~----~~~~v~ 76 (110)
|..+||+.|.|...|.+.+..++.+..++.+.+...+++.+...+.++.+|||+|||+|..+..+++..+ +.++|+
T Consensus 34 ~~~~~r~~f~p~~~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~ 113 (227)
T 2pbf_A 34 MLQVDRGKYIKEIPYIDTPVYISHGVTISAPHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVI 113 (227)
T ss_dssp HHTSCGGGTCSSSTTSSSCEEEETTEEECCHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEE
T ss_pred HHhCCHHHcCCcccCCCCccccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEE
Confidence 4578999999999999999999999999999888888888843467788999999999999999999875 456899
Q ss_pred EEeCCHHHHHHHHHHHHhhc
Q psy5585 77 GIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 77 ~vD~s~~~~~~a~~~~~~~~ 96 (110)
++|+++.+++.+++++...+
T Consensus 114 ~vD~~~~~~~~a~~~~~~~~ 133 (227)
T 2pbf_A 114 GLERVKDLVNFSLENIKRDK 133 (227)
T ss_dssp EEESCHHHHHHHHHHHHHHC
T ss_pred EEeCCHHHHHHHHHHHHHcC
Confidence 99999999999999988765
No 2
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.69 E-value=5.9e-17 Score=105.55 Aligned_cols=96 Identities=53% Similarity=0.873 Sum_probs=83.4
Q ss_pred CCcCCCCCcccCCCCCCCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC-----CcEE
Q psy5585 1 MNQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE-----HGKA 75 (110)
Q Consensus 1 ~~~~~r~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~-----~~~v 75 (110)
|..+||+.|.+...|.+.+.+++++..++.+.+...+++.+...+.++.+|||+|||+|..+..+++..+. .++|
T Consensus 38 ~~~~~r~~f~~~~~y~d~~~~~~~~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v 117 (227)
T 1r18_A 38 MKETDRKHYSPRNPYMDAPQPIGGGVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRI 117 (227)
T ss_dssp HHTSCGGGTCSSCTTBSSCEEEETTEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEE
T ss_pred HHhCCHHHcCCcccccCCCcccCCCCccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEE
Confidence 45689999999999999999999999999999988888888534677889999999999999999997642 3579
Q ss_pred EEEeCCHHHHHHHHHHHHhhc
Q psy5585 76 VGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 76 ~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+++|+++.+++.+++++...+
T Consensus 118 ~~vD~~~~~~~~a~~~~~~~~ 138 (227)
T 1r18_A 118 VGIEHQAELVRRSKANLNTDD 138 (227)
T ss_dssp EEEESCHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHhcC
Confidence 999999999999999887643
No 3
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.68 E-value=3e-16 Score=101.87 Aligned_cols=95 Identities=59% Similarity=0.961 Sum_probs=82.2
Q ss_pred CcCCCCCcccCCCCCCCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCC
Q psy5585 2 NQVDRGNFCSHNPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHI 81 (110)
Q Consensus 2 ~~~~r~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s 81 (110)
..++|+.|.+...|.+.+.+++.+..+..+.....+++.+...+.++.+|||+|||+|..+..+++..++.++|+++|++
T Consensus 32 ~~~~r~~f~~~~~y~~~~~~~~~~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s 111 (226)
T 1i1n_A 32 LATDRSHYAKCNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHI 111 (226)
T ss_dssp HTSCGGGTCSSCTTSSSCEEEETTEEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESC
T ss_pred HhCCHHHcCCCccCCCCccccCCCceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCC
Confidence 45799999998899999998888888888888888888775446678899999999999999999987665689999999
Q ss_pred HHHHHHHHHHHHhhc
Q psy5585 82 PDLVNSSVKNVEKSH 96 (110)
Q Consensus 82 ~~~~~~a~~~~~~~~ 96 (110)
+.+++.+++++...+
T Consensus 112 ~~~~~~a~~~~~~~~ 126 (226)
T 1i1n_A 112 KELVDDSVNNVRKDD 126 (226)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999987754
No 4
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.61 E-value=2.3e-15 Score=96.61 Aligned_cols=93 Identities=28% Similarity=0.436 Sum_probs=79.7
Q ss_pred CCcCCCCCcccC----CCCCCCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEE
Q psy5585 1 MNQVDRGNFCSH----NPYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAV 76 (110)
Q Consensus 1 ~~~~~r~~~~~~----~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~ 76 (110)
|.++||+.|.+. ..|.+.+.+++.+..++.+.....+++.+. ..++.+|||+|||+|..+..+++.. ++|+
T Consensus 29 ~~~~~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~---~~v~ 103 (210)
T 3lbf_A 29 LAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLE--LTPQSRVLEIGTGSGYQTAILAHLV---QHVC 103 (210)
T ss_dssp HHHSCGGGGSCGGGGGGTTSSSCEECTTSCEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SEEE
T ss_pred HHhCCHHHcCCcchhhhccCCCccccCCCCEeCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHhC---CEEE
Confidence 356889999876 388888888888888888888888888776 6788899999999999999999983 3699
Q ss_pred EEeCCHHHHHHHHHHHHhhccc
Q psy5585 77 GIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 77 ~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++|+++.+++.+++++...+..
T Consensus 104 ~vD~~~~~~~~a~~~~~~~~~~ 125 (210)
T 3lbf_A 104 SVERIKGLQWQARRRLKNLDLH 125 (210)
T ss_dssp EEESCHHHHHHHHHHHHHTTCC
T ss_pred EEecCHHHHHHHHHHHHHcCCC
Confidence 9999999999999999876543
No 5
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.60 E-value=4.7e-15 Score=95.50 Aligned_cols=94 Identities=37% Similarity=0.629 Sum_probs=78.9
Q ss_pred CcCCCCCcccCC----CCCCCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEE
Q psy5585 2 NQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVG 77 (110)
Q Consensus 2 ~~~~r~~~~~~~----~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~ 77 (110)
..+||+.|.+.. .|.+.+.+.+.+.....+.+...+++.+. +.++.+|||+|||+|..+..+++..+++++|++
T Consensus 30 ~~~~r~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~ 107 (215)
T 2yxe_A 30 LKVPREEFLPEHLKEYAYVDTPLEIGYGQTISAIHMVGMMCELLD--LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVS 107 (215)
T ss_dssp HHSCGGGGSCGGGGGGTTSCSCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEE
T ss_pred HhCCHHHcCCchhhhhcccCCCccCCCCcEeCcHHHHHHHHHhhC--CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEE
Confidence 467888887653 78888888888888888888888887775 678889999999999999999999765568999
Q ss_pred EeCCHHHHHHHHHHHHhhcc
Q psy5585 78 IDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 78 vD~s~~~~~~a~~~~~~~~~ 97 (110)
+|+++.+++.+++++...+.
T Consensus 108 vD~~~~~~~~a~~~~~~~~~ 127 (215)
T 2yxe_A 108 IERIPELAEKAERTLRKLGY 127 (215)
T ss_dssp EESCHHHHHHHHHHHHHHTC
T ss_pred EeCCHHHHHHHHHHHHHcCC
Confidence 99999999999999876543
No 6
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.58 E-value=1e-14 Score=95.43 Aligned_cols=92 Identities=30% Similarity=0.441 Sum_probs=79.7
Q ss_pred CcCCCCCcccCC----CCCCCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEE
Q psy5585 2 NQVDRGNFCSHN----PYLDAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVG 77 (110)
Q Consensus 2 ~~~~r~~~~~~~----~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~ 77 (110)
..+||+.|.+.. .|.+.+.++..+.....+.+...+++.+. +.++.+|||+|||+|.++..+++..+ ++|++
T Consensus 44 ~~v~r~~f~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~ 119 (235)
T 1jg1_A 44 LKYPRYLSVEDKYKKYAHIDEPLPIPAGQTVSAPHMVAIMLEIAN--LKPGMNILEVGTGSGWNAALISEIVK--TDVYT 119 (235)
T ss_dssp HHSCGGGGSCGGGGGGTTSSSCEECSTTCEECCHHHHHHHHHHHT--CCTTCCEEEECCTTSHHHHHHHHHHC--SCEEE
T ss_pred HhCCHhhhCCchhhhcCccCCCcccCCCceeccHHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEE
Confidence 457899888764 78899988888888888888888888885 67888999999999999999999974 56999
Q ss_pred EeCCHHHHHHHHHHHHhhcc
Q psy5585 78 IDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 78 vD~s~~~~~~a~~~~~~~~~ 97 (110)
+|+++.+++.+++++...+.
T Consensus 120 vD~~~~~~~~a~~~~~~~~~ 139 (235)
T 1jg1_A 120 IERIPELVEFAKRNLERAGV 139 (235)
T ss_dssp EESCHHHHHHHHHHHHHTTC
T ss_pred EeCCHHHHHHHHHHHHHcCC
Confidence 99999999999999887654
No 7
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=2.9e-14 Score=97.18 Aligned_cols=95 Identities=27% Similarity=0.445 Sum_probs=77.4
Q ss_pred CCcCCCCCcccCC-----CCCCCCc-ccccc---ceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC
Q psy5585 1 MNQVDRGNFCSHN-----PYLDAPQ-SIGYK---VTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE 71 (110)
Q Consensus 1 ~~~~~r~~~~~~~-----~y~~~~~-~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~ 71 (110)
|.++||+.|.+.. .|.+.+. ++..+ +....+.....+++.+. +.++.+|||+|||+|.++..+++..+.
T Consensus 22 ~~~vpr~~fl~~~~~y~~~y~~~~~~~l~~~~f~q~~~~~~~~~~l~~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~ 99 (317)
T 1dl5_A 22 FLEIPREEFLTKSYPLSYVYEDIVLVSYDDGEEYSTSSQPSLMALFMEWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGE 99 (317)
T ss_dssp HHHSCGGGGCSSCCCHHHHTSSSCEEEEECSSCEEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCT
T ss_pred HHhCCHHHhCCchhccccCccCCCcccccCCCcceeccCHHHHHHHHHhcC--CCCcCEEEEecCCchHHHHHHHHhcCC
Confidence 3567888888753 5677777 67666 66667777777777775 678889999999999999999999654
Q ss_pred CcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 72 HGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 72 ~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+++|+++|+|+.+++.+++++...+.
T Consensus 100 ~~~v~gvD~s~~~~~~a~~~~~~~g~ 125 (317)
T 1dl5_A 100 KGLVVSVEYSRKICEIAKRNVERLGI 125 (317)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 57899999999999999999887654
No 8
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.50 E-value=2.9e-14 Score=92.68 Aligned_cols=90 Identities=27% Similarity=0.420 Sum_probs=75.2
Q ss_pred CCcCCCCCcccCC----CCC--CCCccccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcE
Q psy5585 1 MNQVDRGNFCSHN----PYL--DAPQSIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGK 74 (110)
Q Consensus 1 ~~~~~r~~~~~~~----~y~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~ 74 (110)
|.++||+.|.+.. .|. +...+++.+.....+.....+++.+. ..++.+|||+|||+|..+..+++.. .+
T Consensus 20 ~~~v~r~~f~~~~~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~---~~ 94 (231)
T 1vbf_A 20 FNKVDRSLFLPENLKDYAYAHTHEALPILPGINTTALNLGIFMLDELD--LHKGQKVLEIGTGIGYYTALIAEIV---DK 94 (231)
T ss_dssp HHHSCHHHHSCGGGGGGSSSSTTCCEEEETTEEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS---SE
T ss_pred HHhCCHHHcCCcchhhhccccCCCceeeCCCCccCCHHHHHHHHHhcC--CCCCCEEEEEcCCCCHHHHHHHHHc---CE
Confidence 4567888777653 788 88888888888888888888887775 6778899999999999999999985 36
Q ss_pred EEEEeCCHHHHHHHHHHHHhh
Q psy5585 75 AVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 75 v~~vD~s~~~~~~a~~~~~~~ 95 (110)
|+++|+++.+++.+++++...
T Consensus 95 v~~vD~~~~~~~~a~~~~~~~ 115 (231)
T 1vbf_A 95 VVSVEINEKMYNYASKLLSYY 115 (231)
T ss_dssp EEEEESCHHHHHHHHHHHTTC
T ss_pred EEEEeCCHHHHHHHHHHHhhc
Confidence 999999999999999988755
No 9
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.47 E-value=4.5e-13 Score=89.31 Aligned_cols=64 Identities=16% Similarity=0.286 Sum_probs=52.4
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+...+...+..+++++.+|||+|||+|..+..+++.+.. ..+|+|+|+|+.|++.|++++...+
T Consensus 56 ~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~ 120 (261)
T 4gek_A 56 IISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYK 120 (261)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhc
Confidence 334444555556789999999999999999999998653 4489999999999999999987654
No 10
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.38 E-value=2e-12 Score=81.37 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=51.4
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
........+...+.++.+|||+|||+|..+..+++. + ++|+|+|+|+.+++.|++++...++
T Consensus 8 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~--~~v~~vD~s~~~l~~a~~~~~~~~~ 69 (185)
T 3mti_A 8 PIHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL-S--KKVYAFDVQEQALGKTSQRLSDLGI 69 (185)
T ss_dssp HHHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT-S--SEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh-C--CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 344555555555678899999999999999999998 3 4799999999999999999987654
No 11
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.34 E-value=5.2e-12 Score=85.01 Aligned_cols=77 Identities=16% Similarity=0.192 Sum_probs=60.6
Q ss_pred ceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhccccccccc
Q psy5585 26 VTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGR 104 (110)
Q Consensus 26 ~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 104 (110)
.....+.+...+++.+. +.++.+|||+|||+|.++..+++.... +++|+++|+|+.|++.++++. ..++.++..+.
T Consensus 23 ~fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-~~~v~~i~~D~ 99 (279)
T 3uzu_A 23 NFLVDHGVIDAIVAAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-GELLELHAGDA 99 (279)
T ss_dssp CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-GGGEEEEESCG
T ss_pred cccCCHHHHHHHHHhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-CCCcEEEECCh
Confidence 35566778888888876 677889999999999999999998643 356999999999999999884 44455554444
Q ss_pred e
Q psy5585 105 V 105 (110)
Q Consensus 105 ~ 105 (110)
.
T Consensus 100 ~ 100 (279)
T 3uzu_A 100 L 100 (279)
T ss_dssp G
T ss_pred h
Confidence 3
No 12
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.34 E-value=3.4e-12 Score=83.54 Aligned_cols=60 Identities=32% Similarity=0.388 Sum_probs=51.7
Q ss_pred HHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 38 LELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 38 ~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++.+..+++++.+|||+|||+|.+++.+++. ++.++|+++|+++.+++.|++|+..+++.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~ 65 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLK 65 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3444455678889999999999999999998 45578999999999999999999998864
No 13
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.34 E-value=7.5e-12 Score=79.95 Aligned_cols=66 Identities=21% Similarity=0.342 Sum_probs=55.9
Q ss_pred cChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 29 SAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+...+...++..+. +.++.+|||+|||+|..+..+++.. +.++|+++|+|+.+++.+++++...+.
T Consensus 24 ~~~~i~~~~l~~l~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~ 89 (204)
T 3e05_A 24 TKQEVRAVTLSKLR--LQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVA 89 (204)
T ss_dssp CCHHHHHHHHHHTT--CCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTC
T ss_pred ChHHHHHHHHHHcC--CCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCC
Confidence 55666666677665 6788899999999999999999994 557899999999999999999987654
No 14
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.33 E-value=6.3e-12 Score=82.46 Aligned_cols=60 Identities=28% Similarity=0.370 Sum_probs=51.5
Q ss_pred HHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 38 LELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 38 ~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++.+..+++++.+|+|+|||+|++++.+++. ++.++|+++|+++.+++.|++|+..+++.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~ 71 (230)
T 3lec_A 12 LQKVANYVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLT 71 (230)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHhCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3444455778889999999999999999998 45568999999999999999999998764
No 15
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.32 E-value=5.2e-12 Score=83.51 Aligned_cols=60 Identities=22% Similarity=0.238 Sum_probs=51.7
Q ss_pred HHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 38 LELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 38 ~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++.+..+++++.+|||+|||+|++++.+++. ++.++|+++|+++.+++.|++|+..+++.
T Consensus 12 L~~i~~~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~ 71 (244)
T 3gnl_A 12 LEKVASYITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLT 71 (244)
T ss_dssp HHHHHTTCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCT
T ss_pred HHHHHHhCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 4445556778889999999999999999998 45568999999999999999999998764
No 16
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.31 E-value=1.5e-11 Score=78.08 Aligned_cols=54 Identities=22% Similarity=0.439 Sum_probs=48.1
Q ss_pred hcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 44 HLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 44 ~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++...++
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 72 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNL 72 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 367888999999999999999999976667899999999999999999887543
No 17
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.31 E-value=1.8e-11 Score=78.63 Aligned_cols=67 Identities=28% Similarity=0.432 Sum_probs=54.8
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++...+...++..+. +.++.+|||+|||+|.++..+++. + ++|+++|+|+.+++.|+++++..++.
T Consensus 37 ~~~~~~~~~~~l~~l~--~~~~~~vLDlGcG~G~~~~~la~~-~--~~v~~vD~s~~~~~~a~~~~~~~g~~ 103 (204)
T 3njr_A 37 QITKSPMRALTLAALA--PRRGELLWDIGGGSGSVSVEWCLA-G--GRAITIEPRADRIENIQKNIDTYGLS 103 (204)
T ss_dssp CCCCHHHHHHHHHHHC--CCTTCEEEEETCTTCHHHHHHHHT-T--CEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred CCCcHHHHHHHHHhcC--CCCCCEEEEecCCCCHHHHHHHHc-C--CEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 3445566666666665 677889999999999999999998 3 37999999999999999999877654
No 18
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.31 E-value=6.9e-12 Score=84.10 Aligned_cols=75 Identities=16% Similarity=0.120 Sum_probs=60.8
Q ss_pred cceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccccccc
Q psy5585 25 KVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGR 104 (110)
Q Consensus 25 ~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 104 (110)
+.....+.+...+++.+. +.++ +|||+|||+|.++..+++.. . +|+++|+|+.+++.+++++...++.++..|.
T Consensus 27 QnfL~d~~i~~~Iv~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~-~--~V~avEid~~~~~~l~~~~~~~~v~vi~~D~ 100 (271)
T 3fut_A 27 QNFLVSEAHLRRIVEAAR--PFTG-PVFEVGPGLGALTRALLEAG-A--EVTAIEKDLRLRPVLEETLSGLPVRLVFQDA 100 (271)
T ss_dssp CCEECCHHHHHHHHHHHC--CCCS-CEEEECCTTSHHHHHHHHTT-C--CEEEEESCGGGHHHHHHHTTTSSEEEEESCG
T ss_pred ccccCCHHHHHHHHHhcC--CCCC-eEEEEeCchHHHHHHHHHcC-C--EEEEEECCHHHHHHHHHhcCCCCEEEEECCh
Confidence 345667788888888886 6677 99999999999999999985 3 5999999999999999988755555555444
Q ss_pred e
Q psy5585 105 V 105 (110)
Q Consensus 105 ~ 105 (110)
+
T Consensus 101 l 101 (271)
T 3fut_A 101 L 101 (271)
T ss_dssp G
T ss_pred h
Confidence 3
No 19
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.30 E-value=6.3e-12 Score=86.11 Aligned_cols=72 Identities=21% Similarity=0.370 Sum_probs=59.5
Q ss_pred cccccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 21 SIGYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+..+..+.....++..+. +.++.+|||+|||+|.++..+++.++++++|+++|+++.+++.|++++..
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~ 152 (336)
T 2b25_A 81 LMKRGTAITFPKDINMILSMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKH 152 (336)
T ss_dssp HSCCSSCCCCHHHHHHHHHHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred hhcCCCcccCHHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHH
Confidence 3444455555666777777775 77888999999999999999999876667899999999999999999885
No 20
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.30 E-value=1.5e-11 Score=79.12 Aligned_cols=63 Identities=16% Similarity=0.244 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.....+.+.+. ..++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.+++++...++
T Consensus 16 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~ 78 (217)
T 3jwh_A 16 QRMNGVVAALK--QSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRL 78 (217)
T ss_dssp HHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHH--hcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcC
Confidence 44455556555 4577899999999999999999974 446899999999999999999875543
No 21
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.30 E-value=6.1e-12 Score=82.68 Aligned_cols=51 Identities=24% Similarity=0.490 Sum_probs=47.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
++++++|||+|||+|.++..+++..+++|+|+|+|+++.|++.+++++...
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~ 125 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR 125 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh
Confidence 679999999999999999999999999999999999999999999887653
No 22
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.29 E-value=1.5e-11 Score=78.55 Aligned_cols=64 Identities=13% Similarity=-0.048 Sum_probs=53.6
Q ss_pred HHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 34 HAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 34 ~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.+.++..+..++.+..+|||+|||+|-+++.++... +..+|+++|+|+.|++.+++++..+++.
T Consensus 36 ld~fY~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~ 99 (200)
T 3fzg_A 36 LNDFYTYVFGNIKHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTT 99 (200)
T ss_dssp HHHHHHHHHHHSCCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCS
T ss_pred HHHHHHHHHhhcCCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 344455554556778899999999999999999985 5569999999999999999999988765
No 23
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.28 E-value=2.1e-11 Score=78.48 Aligned_cols=62 Identities=16% Similarity=0.296 Sum_probs=50.1
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.....+.+.+. ..++.+|||+|||+|..+..+++.. +..+|+|+|+|+.+++.+++++...+
T Consensus 16 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~ 77 (219)
T 3jwg_A 16 QRLGTVVAVLK--SVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDR 77 (219)
T ss_dssp HHHHHHHHHHH--HTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHh--hcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhc
Confidence 34455555554 4567899999999999999999985 44689999999999999999987654
No 24
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.28 E-value=1e-11 Score=83.61 Aligned_cols=50 Identities=24% Similarity=0.274 Sum_probs=44.8
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|.+++.+++. +..+|+|+|+|+.+++.|++++..+++
T Consensus 122 ~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l 171 (284)
T 1nv8_A 122 YGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGV 171 (284)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 36679999999999999999998 446899999999999999999988764
No 25
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.28 E-value=5e-11 Score=73.64 Aligned_cols=65 Identities=25% Similarity=0.204 Sum_probs=52.3
Q ss_pred cChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 29 SAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
....+...++..+...+.++.+|||+|||+|..+..+++.. + +|+|+|+|+.+++.+++++...+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~-~--~v~~vD~~~~~~~~a~~~~~~~~ 87 (171)
T 1ws6_A 23 SPVRLRKALFDYLRLRYPRRGRFLDPFAGSGAVGLEAASEG-W--EAVLVEKDPEAVRLLKENVRRTG 87 (171)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCEEEEETCSSCHHHHHHHHTT-C--EEEEECCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhhccCCCeEEEeCCCcCHHHHHHHHCC-C--eEEEEeCCHHHHHHHHHHHHHcC
Confidence 34455666666665333377899999999999999999984 4 39999999999999999988764
No 26
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.28 E-value=3.1e-11 Score=78.12 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=47.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+..+|||+|||+|..+..+++.+++.++|+++|+++.+++.|++++...++
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 108 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGL 108 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCC
Confidence 44678999999999999999999865567999999999999999999988764
No 27
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.28 E-value=7.4e-12 Score=83.29 Aligned_cols=74 Identities=12% Similarity=0.172 Sum_probs=59.1
Q ss_pred ceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hccccccccc
Q psy5585 26 VTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK-SHKALLDSGR 104 (110)
Q Consensus 26 ~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~~~ 104 (110)
.....+.+...+++.+. +.++.+|||+|||+|.++..+++.. ++|+++|+|+.+++.+++++.. .++.++..+.
T Consensus 10 nFL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~~La~~~---~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~ 84 (255)
T 3tqs_A 10 HFLHDSFVLQKIVSAIH--PQKTDTLVEIGPGRGALTDYLLTEC---DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDA 84 (255)
T ss_dssp CEECCHHHHHHHHHHHC--CCTTCEEEEECCTTTTTHHHHTTTS---SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCT
T ss_pred ccccCHHHHHHHHHhcC--CCCcCEEEEEcccccHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcch
Confidence 35566778888888886 6778899999999999999999984 3699999999999999998864 2344444333
No 28
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.26 E-value=6.6e-11 Score=73.69 Aligned_cols=64 Identities=23% Similarity=0.295 Sum_probs=52.6
Q ss_pred cChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 29 SAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
....+...++..+. ..++.+|||+|||+|..+..+++. ..+++++|+|+.+++.+++++..++.
T Consensus 19 ~~~~~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~ 82 (183)
T 2yxd_A 19 TKEEIRAVSIGKLN--LNKDDVVVDVGCGSGGMTVEIAKR---CKFVYAIDYLDGAIEVTKQNLAKFNI 82 (183)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEESCCCSHHHHHHHTT---SSEEEEEECSHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHcC--CCCCCEEEEeCCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHHcCC
Confidence 44556666666664 567789999999999999999983 34799999999999999999987754
No 29
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.26 E-value=1.4e-11 Score=76.69 Aligned_cols=67 Identities=18% Similarity=0.174 Sum_probs=54.6
Q ss_pred cChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 29 SAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+...+...++..+. ..++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++...+..
T Consensus 9 t~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 75 (178)
T 3hm2_A 9 TKQHVRALAISALA--PKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVS 75 (178)
T ss_dssp HHHHHHHHHHHHHC--CCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCT
T ss_pred cHHHHHHHHHHHhc--ccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCC
Confidence 34555566666664 5677899999999999999999985 4578999999999999999998876553
No 30
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.26 E-value=3.8e-11 Score=77.13 Aligned_cols=61 Identities=33% Similarity=0.539 Sum_probs=51.8
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++..+. +.++.+|||+|||+|..+..+++..++..+|+++|+|+.+++.+++++...+.
T Consensus 27 ~~~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 87 (219)
T 3dh0_A 27 EKVLKEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGL 87 (219)
T ss_dssp HHHHHHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC
Confidence 45555554 66788999999999999999999975666899999999999999999877654
No 31
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.25 E-value=5.7e-11 Score=75.07 Aligned_cols=67 Identities=15% Similarity=0.154 Sum_probs=52.6
Q ss_pred cChhhHHHHHHHHHhhc-CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 29 SAPHMHAHALELLREHL-ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~-~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
....+...++..+.... .++.+|||+|||+|.++..++.. + ..+|+++|+|+.+++.+++++..++.
T Consensus 25 ~~~~~~~~l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~ 92 (189)
T 3p9n_A 25 TTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL 92 (189)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 34556666777665321 46789999999999999988876 3 24799999999999999999988764
No 32
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.25 E-value=6.6e-11 Score=76.43 Aligned_cols=54 Identities=22% Similarity=0.315 Sum_probs=47.3
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++...+..
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~ 115 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS 115 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC
Confidence 446789999999999999999998754678999999999999999999877643
No 33
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.23 E-value=1.8e-11 Score=78.56 Aligned_cols=46 Identities=17% Similarity=0.119 Sum_probs=41.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.|++.|+++..
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~-g~--~V~gvD~S~~~l~~a~~~~~ 65 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ-GY--HVVGAELSEAAVERYFTERG 65 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH-CC--EEEEEEECHHHHHHHHHHHC
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC-CC--eEEEEeCCHHHHHHHHHHcc
Confidence 457789999999999999999998 44 69999999999999998754
No 34
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.23 E-value=7.1e-11 Score=77.65 Aligned_cols=64 Identities=22% Similarity=0.305 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.....++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.|++++...+.
T Consensus 80 ~~~~~i~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~ 143 (255)
T 3mb5_A 80 KDAALIVAYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGF 143 (255)
T ss_dssp HHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred hHHHHHHHhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCC
Confidence 34444555444 56788999999999999999999966667899999999999999999987664
No 35
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.23 E-value=8.9e-11 Score=76.61 Aligned_cols=65 Identities=18% Similarity=0.279 Sum_probs=52.5
Q ss_pred ChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 30 APHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+.....+...+. ..++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.|++++...++
T Consensus 56 ~~~~~~~l~~~~~--~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~ 120 (232)
T 3ntv_A 56 DRLTLDLIKQLIR--MNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHF 120 (232)
T ss_dssp CHHHHHHHHHHHH--HHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHh--hcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3445555555554 4577899999999999999999964 457899999999999999999987664
No 36
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.22 E-value=1.2e-10 Score=76.81 Aligned_cols=53 Identities=25% Similarity=0.359 Sum_probs=47.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+..+|||+|||+|+.++.+++.+++.++|+++|+++.+++.+++++...++
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~ 129 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGV 129 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 44667999999999999999999975567999999999999999999987654
No 37
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.22 E-value=8.2e-11 Score=76.56 Aligned_cols=49 Identities=8% Similarity=0.082 Sum_probs=44.7
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+|||+|||+|..++.+++.+++.++|+++|+++.+++.|++++...++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~ 106 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGY 106 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3999999999999999999876678999999999999999999988654
No 38
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.21 E-value=5.5e-11 Score=77.23 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=45.9
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++.+|||||||+|.++..+++.. ++..|+|+|+|+.+++.+++++...++.
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~ 84 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLS 84 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCS
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCC
Confidence 466799999999999999999985 5678999999999999999998876644
No 39
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.21 E-value=1.1e-10 Score=76.39 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=54.2
Q ss_pred ecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 28 ISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 28 ~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
...+.....+...+. ..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.+++++...+.
T Consensus 43 ~~~~~~~~~l~~l~~--~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~ 110 (239)
T 2hnk_A 43 QISPEEGQFLNILTK--ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGL 110 (239)
T ss_dssp SCCHHHHHHHHHHHH--HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ccCHHHHHHHHHHHH--hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 344555555555554 45778999999999999999999975456899999999999999999877654
No 40
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.21 E-value=3.4e-11 Score=81.65 Aligned_cols=72 Identities=21% Similarity=0.175 Sum_probs=58.5
Q ss_pred ceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh-hccccccc
Q psy5585 26 VTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK-SHKALLDS 102 (110)
Q Consensus 26 ~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~-~~~~~~~~ 102 (110)
..+..+.+...+++.+. +.++.+|||+|||+|.++..+++.. . +|+++|+|+.+++.+++++.. .++.++..
T Consensus 31 nfL~d~~i~~~Iv~~l~--~~~~~~VLEIG~G~G~lT~~La~~~-~--~V~aVEid~~li~~a~~~~~~~~~v~vi~g 103 (295)
T 3gru_A 31 CFLIDKNFVNKAVESAN--LTKDDVVLEIGLGKGILTEELAKNA-K--KVYVIEIDKSLEPYANKLKELYNNIEIIWG 103 (295)
T ss_dssp CEECCHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHS-S--EEEEEESCGGGHHHHHHHHHHCSSEEEEES
T ss_pred cccCCHHHHHHHHHhcC--CCCcCEEEEECCCchHHHHHHHhcC-C--EEEEEECCHHHHHHHHHHhccCCCeEEEEC
Confidence 36677888888888876 6788899999999999999999983 3 699999999999999998863 23444433
No 41
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.21 E-value=5.6e-11 Score=76.75 Aligned_cols=51 Identities=22% Similarity=0.382 Sum_probs=45.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.|++++...++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~ 87 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEA 87 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCC
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCC
Confidence 456799999999999999999985 557899999999999999999887654
No 42
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.20 E-value=4.9e-11 Score=79.62 Aligned_cols=62 Identities=24% Similarity=0.372 Sum_probs=49.3
Q ss_pred HHHHHHHHhhc-CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 35 AHALELLREHL-ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 35 ~~~~~~l~~~~-~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+.+.+...+ .++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++..+++
T Consensus 96 e~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~ 158 (276)
T 2b3t_A 96 ECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAI 158 (276)
T ss_dssp HHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 33444443223 466799999999999999999885 456899999999999999999987664
No 43
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.20 E-value=2.6e-10 Score=74.71 Aligned_cols=53 Identities=26% Similarity=0.356 Sum_probs=47.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+..+|||+|||+|+.+..+++..++.++|+++|+++.+++.+++++...++
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~ 120 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGV 120 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 45667999999999999999999976568999999999999999999987664
No 44
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.20 E-value=2.5e-11 Score=79.99 Aligned_cols=65 Identities=20% Similarity=0.357 Sum_probs=51.8
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.....+...+. ..+..+|||+|||+|..++.+++.+++.++|+++|+++.+++.|++++...++
T Consensus 46 ~~~~~~l~~l~~--~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~ 110 (242)
T 3r3h_A 46 PEQAQFMQMLIR--LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQ 110 (242)
T ss_dssp HHHHHHHHHHHH--HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTC
T ss_pred HHHHHHHHHHHh--hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 333333333333 45678999999999999999999876568999999999999999999988764
No 45
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.20 E-value=1e-10 Score=75.55 Aligned_cols=53 Identities=19% Similarity=0.391 Sum_probs=47.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|..+..+++..++.++|+++|+++.+++.+++++...+.
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 108 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANL 108 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 45678999999999999999999975467999999999999999999987664
No 46
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.20 E-value=9.2e-11 Score=75.12 Aligned_cols=65 Identities=17% Similarity=0.100 Sum_probs=50.2
Q ss_pred ChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 30 APHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
...+...+++.+... .++.+|||+|||+|.+++.++... . .+|+++|+|+.+++.+++++..+++
T Consensus 38 ~~~~~~~l~~~l~~~-~~~~~vLDlgcG~G~~~~~l~~~~-~-~~V~~vD~s~~~l~~a~~~~~~~~~ 102 (202)
T 2fpo_A 38 TDRVRETLFNWLAPV-IVDAQCLDCFAGSGALGLEALSRY-A-AGATLIEMDRAVSQQLIKNLATLKA 102 (202)
T ss_dssp CHHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTT-C-SEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhh-cCCCeEEEeCCCcCHHHHHHHhcC-C-CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 344555556655421 266899999999999999877774 2 3799999999999999999988754
No 47
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.19 E-value=1.8e-10 Score=73.48 Aligned_cols=65 Identities=17% Similarity=0.197 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.....+++.+...+.++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++++...+..
T Consensus 45 ~~~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~ 109 (205)
T 3grz_A 45 QTTQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIY 109 (205)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 4445566666655678889999999999999998886 3 358999999999999999999877643
No 48
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.19 E-value=9.2e-11 Score=75.08 Aligned_cols=64 Identities=17% Similarity=0.061 Sum_probs=50.0
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+...+++.+... .++.+|||+|||+|.+++.++... . .+|+++|+|+.+++.|++++..+++
T Consensus 38 ~~~~~~l~~~l~~~-~~~~~vLDlGcGtG~~~~~~~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~ 101 (201)
T 2ift_A 38 DRVKETLFNWLMPY-IHQSECLDGFAGSGSLGFEALSRQ-A-KKVTFLELDKTVANQLKKNLQTLKC 101 (201)
T ss_dssp CHHHHHHHHHHHHH-HTTCEEEETTCTTCHHHHHHHHTT-C-SEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHh-cCCCeEEEcCCccCHHHHHHHHcc-C-CEEEEEECCHHHHHHHHHHHHHhCC
Confidence 44555566666421 266899999999999999877763 2 4799999999999999999987664
No 49
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.18 E-value=3.1e-11 Score=79.64 Aligned_cols=63 Identities=17% Similarity=0.260 Sum_probs=50.9
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
...+..+...+++.+. +.++.+|||+|||+|.++..+++.. ++|+|+|+|+.+++.+++++..
T Consensus 12 fl~d~~~~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~ 74 (244)
T 1qam_A 12 FITSKHNIDKIMTNIR--LNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD 74 (244)
T ss_dssp BCCCHHHHHHHHTTCC--CCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT
T ss_pred ccCCHHHHHHHHHhCC--CCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc
Confidence 3445566666666554 5577899999999999999999985 3699999999999999988754
No 50
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.18 E-value=1.2e-10 Score=76.76 Aligned_cols=54 Identities=22% Similarity=0.333 Sum_probs=47.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|++++...++.
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~ 114 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD 114 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 456789999999999999999998754679999999999999999999876543
No 51
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.18 E-value=1.2e-10 Score=76.36 Aligned_cols=63 Identities=29% Similarity=0.319 Sum_probs=51.5
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
......++..+. +.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...++
T Consensus 22 ~~~~~~l~~~~~--~~~~~~VLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~ 84 (256)
T 1nkv_A 22 EEKYATLGRVLR--MKPGTRILDLGSGSGEMLCTWARDHG--ITGTGIDMSSLFTAQAKRRAEELGV 84 (256)
T ss_dssp HHHHHHHHHHTC--CCTTCEEEEETCTTCHHHHHHHHHTC--CEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhcC--CeEEEEeCCHHHHHHHHHHHHhcCC
Confidence 445555555554 56788999999999999999999863 3799999999999999999887653
No 52
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.18 E-value=1.9e-10 Score=73.79 Aligned_cols=52 Identities=17% Similarity=0.149 Sum_probs=45.8
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+..+|||+|||+|..+..+++..++.++|+++|+|+.+++.+++++...+.
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~ 106 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGL 106 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSG
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC
Confidence 4667999999999999999999865467899999999999999999887654
No 53
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.17 E-value=1.3e-10 Score=80.19 Aligned_cols=70 Identities=20% Similarity=0.135 Sum_probs=56.0
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
....+.+...++..+. ..++..|||+|||+|.+++.++...+++.+++|+|+|+.+++.|++++...++.
T Consensus 185 a~l~~~la~~l~~~~~--~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~ 254 (354)
T 3tma_A 185 GSLTPVLAQALLRLAD--ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS 254 (354)
T ss_dssp CSCCHHHHHHHHHHTT--CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred CCcCHHHHHHHHHHhC--CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC
Confidence 3444555555555554 567789999999999999999998645567999999999999999999887753
No 54
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.17 E-value=1.3e-10 Score=74.74 Aligned_cols=51 Identities=22% Similarity=0.283 Sum_probs=45.4
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.|++++...++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~ 90 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGV 90 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCC
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCC
Confidence 467799999999999999999995 557899999999999999999987654
No 55
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.16 E-value=3.1e-11 Score=80.53 Aligned_cols=59 Identities=8% Similarity=0.089 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.....+++.+. +.++.+|||+|||+|.++..+++.. . +|+|+|+|+.|++.+++++...
T Consensus 32 ~~~~~il~~l~--l~~g~~VLDlGcGtG~~a~~La~~g-~--~V~gvD~S~~ml~~Ar~~~~~~ 90 (261)
T 3iv6_A 32 SDRENDIFLEN--IVPGSTVAVIGASTRFLIEKALERG-A--SVTVFDFSQRMCDDLAEALADR 90 (261)
T ss_dssp CHHHHHHHTTT--CCTTCEEEEECTTCHHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHTSSS
T ss_pred HHHHHHHHhcC--CCCcCEEEEEeCcchHHHHHHHhcC-C--EEEEEECCHHHHHHHHHHHHhc
Confidence 34455555554 6678899999999999999999984 3 6999999999999999987654
No 56
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.16 E-value=1.1e-10 Score=77.29 Aligned_cols=51 Identities=20% Similarity=0.224 Sum_probs=46.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++.+|||+|||+|..++.++... ++.+|+++|+|+.+++.+++++..+++.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~ 130 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLK 130 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 56799999999999999999985 5678999999999999999999887654
No 57
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.16 E-value=1.7e-10 Score=78.41 Aligned_cols=62 Identities=21% Similarity=0.298 Sum_probs=52.6
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
+.+...+++.+. +.++.+|||+|||+|..+..+++.++ .++|+|+|.|+.+++.|++++...
T Consensus 12 pvLl~e~l~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~ 73 (301)
T 1m6y_A 12 PVMVREVIEFLK--PEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEF 73 (301)
T ss_dssp CTTHHHHHHHHC--CCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHhcC--CCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc
Confidence 345566677775 66788999999999999999999964 568999999999999999998765
No 58
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.16 E-value=1e-10 Score=76.54 Aligned_cols=51 Identities=18% Similarity=0.221 Sum_probs=44.9
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++++...++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~ 119 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQL 119 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 467899999999999999999863 556899999999999999999988764
No 59
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.16 E-value=1.9e-10 Score=81.56 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=51.6
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHH-------HHHHHhhc
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSS-------VKNVEKSH 96 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a-------~~~~~~~~ 96 (110)
+.+...+++.+. +.++.+|||+|||+|.++..+++..+. .+|+|+|+++.+++.| ++++...+
T Consensus 228 p~~v~~ml~~l~--l~~g~~VLDLGCGsG~la~~LA~~~g~-~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G 297 (433)
T 1u2z_A 228 PNFLSDVYQQCQ--LKKGDTFMDLGSGVGNCVVQAALECGC-ALSFGCEIMDDASDLTILQYEELKKRCKLYG 297 (433)
T ss_dssp HHHHHHHHHHTT--CCTTCEEEEESCTTSHHHHHHHHHHCC-SEEEEEECCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCcCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC
Confidence 455566666664 678889999999999999999998643 5799999999999999 77777655
No 60
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.16 E-value=5.7e-11 Score=78.87 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=54.9
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh-ccccccccc
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS-HKALLDSGR 104 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~ 104 (110)
....+.+...+++.+. +.++.+|||+|||+|.++. +. . ..+.+|+++|+|+.|++.+++++... ++.++..+.
T Consensus 3 fL~d~~i~~~iv~~~~--~~~~~~VLEIG~G~G~lt~-l~-~-~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~ 76 (252)
T 1qyr_A 3 FLNDQFVIDSIVSAIN--PQKGQAMVEIGPGLAALTE-PV-G-ERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDA 76 (252)
T ss_dssp EECCHHHHHHHHHHHC--CCTTCCEEEECCTTTTTHH-HH-H-TTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCG
T ss_pred CcCCHHHHHHHHHhcC--CCCcCEEEEECCCCcHHHH-hh-h-CCCCeEEEEECCHHHHHHHHHHhccCCceEEEECch
Confidence 4566778888888875 6677899999999999999 65 4 23234999999999999999876542 344444443
No 61
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.16 E-value=2.4e-10 Score=73.98 Aligned_cols=53 Identities=23% Similarity=0.294 Sum_probs=46.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++...+.
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~ 119 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEA 119 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTC
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCC
Confidence 45678999999999999999999865457899999999999999999887654
No 62
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.16 E-value=2.8e-10 Score=75.77 Aligned_cols=64 Identities=25% Similarity=0.376 Sum_probs=52.9
Q ss_pred ChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 30 APHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.+.....++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.+++++...
T Consensus 84 ~~~~~~~i~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~ 147 (280)
T 1i9g_A 84 YPKDAAQIVHEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGC 147 (280)
T ss_dssp CHHHHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 3445555555554 667889999999999999999997666678999999999999999998765
No 63
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.15 E-value=9.3e-11 Score=78.95 Aligned_cols=64 Identities=23% Similarity=0.328 Sum_probs=53.6
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
....+.+...+++.+. +.++.+|||+|||+|.++..+++.. . +|+++|+|+.+++.+++++...
T Consensus 10 fl~d~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~-~--~v~~vD~~~~~~~~a~~~~~~~ 73 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAA--LRPTDVVLEVGPGTGNMTVKLLEKA-K--KVVACELDPRLVAELHKRVQGT 73 (285)
T ss_dssp EECCHHHHHHHHHHTC--CCTTCEEEEECCTTSTTHHHHHHHS-S--EEEEEESCHHHHHHHHHHHTTS
T ss_pred ccCCHHHHHHHHHhcC--CCCCCEEEEEcCcccHHHHHHHhhC-C--EEEEEECCHHHHHHHHHHHHhc
Confidence 3456777777777775 5677899999999999999999984 3 6999999999999999988643
No 64
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.15 E-value=1.3e-10 Score=76.45 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=44.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
+.++.+|||+|||+|.+++.+++.. +..+|+|+|+|+.+++.+++++..+
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~ 96 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIAL 96 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHH
Confidence 3467799999999999999999995 5568999999999999999988765
No 65
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.15 E-value=1.4e-10 Score=74.87 Aligned_cols=48 Identities=19% Similarity=0.279 Sum_probs=40.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
+.++.+|||+|||+|..+..+++..+ .++|+|+|+|+.|++.+.+..+
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~ 102 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVR 102 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHh
Confidence 45778999999999999999999975 6789999999998766655544
No 66
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.15 E-value=2.3e-10 Score=74.07 Aligned_cols=52 Identities=17% Similarity=0.390 Sum_probs=46.2
Q ss_pred hcCCCCeEEEecCC-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 44 HLENGKRALDVGSG-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 44 ~~~~~~~vldiGcG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+.++.+|||+||| +|.++..+++.. ..+|+|+|+|+.+++.+++++..++.
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~ 104 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS 104 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 36688999999999 999999999985 35799999999999999999988763
No 67
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.15 E-value=1.1e-10 Score=79.03 Aligned_cols=65 Identities=17% Similarity=0.284 Sum_probs=54.3
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
...++.+...+++.+. +.++.+|||+|||+|.++..+++.. ++|+|+|+|+.+++.+++++...+
T Consensus 24 fl~~~~i~~~i~~~~~--~~~~~~VLDiG~G~G~lt~~La~~~---~~v~~vDi~~~~~~~a~~~~~~~~ 88 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAK--IKSSDIVLEIGCGTGNLTVKLLPLA---KKVITIDIDSRMISEVKKRCLYEG 88 (299)
T ss_dssp EECCHHHHHHHHHHHC--CCTTCEEEEECCTTSTTHHHHTTTS---SEEEEECSCHHHHHHHHHHHHHTT
T ss_pred eecCHHHHHHHHHhcC--CCCcCEEEEEcCcCcHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcC
Confidence 4456777788887775 6678899999999999999999873 369999999999999999986543
No 68
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.14 E-value=1.8e-10 Score=73.36 Aligned_cols=50 Identities=28% Similarity=0.438 Sum_probs=31.7
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.++.+|||+|||+|..+..+++.. +..+++|+|+|+.+++.+++++...+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~ 78 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFG 78 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC---------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhC
Confidence 567899999999999999999995 55689999999999999999887654
No 69
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.14 E-value=2e-11 Score=80.89 Aligned_cols=72 Identities=18% Similarity=0.250 Sum_probs=56.0
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccccc
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSG 103 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~ 103 (110)
....+.+...+++.+. ..++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++ ...++.++..+
T Consensus 13 fl~d~~i~~~iv~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~-~~~~v~~i~~D 84 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELN--IEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI-GDERLEVINED 84 (249)
T ss_dssp CEECHHHHHHHHHHTT--CCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS-CCTTEEEECSC
T ss_pred ccCCHHHHHHHHHhcC--CCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc-cCCCeEEEEcc
Confidence 4556677788888775 667889999999999999999998 3 24799999999999999877 33344444433
No 70
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.14 E-value=3e-10 Score=74.74 Aligned_cols=50 Identities=18% Similarity=0.238 Sum_probs=43.9
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
++.+|||+|||+|.++..++... +..+|+|+|+|+.+++.|++++..+++
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~ 114 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL-NGWYFLATEVDDMCFNYAKKNVEQNNL 114 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH-HCCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCChhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHcCC
Confidence 46799999999999999999885 346899999999999999999987654
No 71
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.14 E-value=2.7e-10 Score=76.34 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=46.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|.+++.+++.. .. +|+|+|+|+.+++.+++++..+++.
T Consensus 123 ~~~~~~VLDlgcG~G~~~~~la~~~-~~-~V~~vD~s~~~~~~a~~n~~~n~~~ 174 (278)
T 2frn_A 123 AKPDELVVDMFAGIGHLSLPIAVYG-KA-KVIAIEKDPYTFKFLVENIHLNKVE 174 (278)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHT-CC-EEEEECCCHHHHHHHHHHHHHTTCT
T ss_pred CCCCCEEEEecccCCHHHHHHHHhC-CC-EEEEEECCHHHHHHHHHHHHHcCCC
Confidence 5678899999999999999999985 42 7999999999999999999987764
No 72
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.13 E-value=3e-10 Score=80.13 Aligned_cols=60 Identities=13% Similarity=0.173 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
......++..+. +.++.+|||||||+|.+++.++...+. .+|+|||+++.+++.|+++..
T Consensus 159 ~~~i~~il~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~-~kVvGIDiS~~~lelAr~n~e 218 (438)
T 3uwp_A 159 FDLVAQMIDEIK--MTDDDLFVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDR 218 (438)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHHHCCC-SEEEEEECCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHH
Confidence 344455555554 678899999999999999999987543 469999999999999988753
No 73
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.13 E-value=4.1e-10 Score=73.21 Aligned_cols=67 Identities=22% Similarity=0.257 Sum_probs=54.2
Q ss_pred ecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 28 ISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 28 ~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.....+...+. ..++.+|||+|||+|..+..+++.. +.++|+++|+++.+++.|++++...+.
T Consensus 37 ~~~~~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~ 103 (233)
T 2gpy_A 37 IMDLLGMESLLHLLK--MAAPARILEIGTAIGYSAIRMAQAL-PEATIVSIERDERRYEEAHKHVKALGL 103 (233)
T ss_dssp CCCHHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHHh--ccCCCEEEEecCCCcHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 345555555555554 5577899999999999999999996 356899999999999999999887653
No 74
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.13 E-value=3.2e-10 Score=75.03 Aligned_cols=61 Identities=33% Similarity=0.535 Sum_probs=50.9
Q ss_pred HHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 34 HAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 34 ~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
....++.+...+.++.+|||+|||+|.+++.+++. ++ +|+++|+|+.+++.+++++..+++
T Consensus 107 t~~~~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g~--~v~gvDi~~~~v~~a~~n~~~~~~ 167 (254)
T 2nxc_A 107 TRLALKALARHLRPGDKVLDLGTGSGVLAIAAEKL-GG--KALGVDIDPMVLPQAEANAKRNGV 167 (254)
T ss_dssp HHHHHHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCGGGHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-CC--eEEEEECCHHHHHHHHHHHHHcCC
Confidence 34455566555677889999999999999999987 44 799999999999999999988764
No 75
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.13 E-value=4.6e-10 Score=73.69 Aligned_cols=61 Identities=31% Similarity=0.437 Sum_probs=50.7
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
....++..+. +.++.+|||+|||+|.++..+++.+++.++|+++|+++.+++.+++++...
T Consensus 84 ~~~~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~ 144 (258)
T 2pwy_A 84 DASAMVTLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF 144 (258)
T ss_dssp HHHHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh
Confidence 3344455443 567889999999999999999999655678999999999999999998776
No 76
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.13 E-value=8.7e-10 Score=70.29 Aligned_cols=68 Identities=19% Similarity=0.244 Sum_probs=53.0
Q ss_pred eecChhhHHHHHHHHHhh-cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 27 TISAPHMHAHALELLREH-LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~-~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
..........++..+... ..++.+|||+|||+|.++..+++. +. .+|+|+|+|+.+++.+++++..++
T Consensus 28 ~~~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~~~~ 96 (207)
T 1wy7_A 28 YRTPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLL-GA-KEVICVEVDKEAVDVLIENLGEFK 96 (207)
T ss_dssp CCCCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHTGGGT
T ss_pred ecCchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHHHHHcC
Confidence 445566666666555421 346789999999999999999987 33 479999999999999999988764
No 77
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.12 E-value=2.4e-10 Score=74.61 Aligned_cols=63 Identities=16% Similarity=0.322 Sum_probs=52.2
Q ss_pred ChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 30 APHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
++......++.+. +.++.+|||+|||+|..+..+++.. . +|+++|+|+.+++.+++++...+.
T Consensus 6 ~~~~~~~~~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~~ 68 (239)
T 1xxl_A 6 HHHSLGLMIKTAE--CRAEHRVLDIGAGAGHTALAFSPYV-Q--ECIGVDATKEMVEVASSFAQEKGV 68 (239)
T ss_dssp CHHHHHHHHHHHT--CCTTCEEEEESCTTSHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHHTC
T ss_pred cCCCcchHHHHhC--cCCCCEEEEEccCcCHHHHHHHHhC-C--EEEEEECCHHHHHHHHHHHHHcCC
Confidence 3445556666666 7788999999999999999999885 3 699999999999999999877653
No 78
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.12 E-value=1.8e-10 Score=80.43 Aligned_cols=50 Identities=22% Similarity=0.286 Sum_probs=43.4
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++++|||||||+|.+++.+++.+ + .+|++||.|+ +++.|+++++.++..
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aG-A-~~V~ave~s~-~~~~a~~~~~~n~~~ 131 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAG-A-RRVYAVEASA-IWQQAREVVRFNGLE 131 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTT-C-SEEEEEECST-THHHHHHHHHHTTCT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhC-C-CEEEEEeChH-HHHHHHHHHHHcCCC
Confidence 478899999999999999999884 4 4899999996 889999999988753
No 79
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.12 E-value=9.4e-10 Score=68.82 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=50.5
Q ss_pred ChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 30 APHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 30 ~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
...+...+++.+.. ..++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++++..+++
T Consensus 28 ~~~~~~~~~~~l~~-~~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~ 92 (187)
T 2fhp_A 28 TDKVKESIFNMIGP-YFDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKE 92 (187)
T ss_dssp CHHHHHHHHHHHCS-CCSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHh-hcCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 34555555555531 246789999999999999998885 3 35799999999999999999987653
No 80
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.12 E-value=3.7e-10 Score=71.95 Aligned_cols=64 Identities=17% Similarity=0.221 Sum_probs=50.2
Q ss_pred hHHHHHHHHHhh-cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 33 MHAHALELLREH-LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 33 ~~~~~~~~l~~~-~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
....+++.+... ..++.+|||+|||+|..+..++... +..+++++|+|+.+++.+++++...+.
T Consensus 50 ~~~~~~~~l~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~ 114 (207)
T 1jsx_A 50 LVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKL 114 (207)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhhhhhhhhcCCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 444555555411 1146899999999999999999985 456899999999999999999887654
No 81
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.12 E-value=3.6e-10 Score=73.76 Aligned_cols=53 Identities=26% Similarity=0.394 Sum_probs=46.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+..+|||+|||+|..+..+++..++.++|+++|+++.+++.|++++...+.
T Consensus 70 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~ 122 (232)
T 3cbg_A 70 LTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGV 122 (232)
T ss_dssp HHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTC
T ss_pred hcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 34667999999999999999999875467899999999999999999877654
No 82
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.12 E-value=2.8e-10 Score=70.95 Aligned_cols=64 Identities=20% Similarity=0.207 Sum_probs=49.2
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
......++..+.. ..++.+|||+|||+|..+..+++. + ..+|+++|+|+.+++.+++++...++
T Consensus 16 ~~~~~~~~~~l~~-~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~ 79 (177)
T 2esr_A 16 DKVRGAIFNMIGP-YFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKA 79 (177)
T ss_dssp --CHHHHHHHHCS-CCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHh-hcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3444555555531 346789999999999999999987 3 25799999999999999999987653
No 83
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.12 E-value=1.4e-10 Score=76.92 Aligned_cols=45 Identities=16% Similarity=0.113 Sum_probs=39.7
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
.++.+|||+|||+|..+..|++. +. +|+|+|+|+.|++.|+++..
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~-G~--~V~gvD~S~~~i~~a~~~~~ 111 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR-GH--TVVGVEISEIGIREFFAEQN 111 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT-TC--EEEEECSCHHHHHHHHHHTT
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC-CC--eEEEEECCHHHHHHHHHhcc
Confidence 46789999999999999999998 44 69999999999999987653
No 84
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.11 E-value=4.7e-10 Score=70.17 Aligned_cols=64 Identities=22% Similarity=0.307 Sum_probs=52.9
Q ss_pred cChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 29 SAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+...+...++..+. ..++.+|||+|||+|..+..+++.. .+|+++|+|+.+++.+++++...+.
T Consensus 17 ~~~~~~~~~~~~~~--~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~ 80 (192)
T 1l3i_A 17 TAMEVRCLIMCLAE--PGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGL 80 (192)
T ss_dssp CCHHHHHHHHHHHC--CCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred ChHHHHHHHHHhcC--CCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 34556666666664 6678899999999999999999985 4799999999999999999877654
No 85
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.11 E-value=5.8e-11 Score=77.92 Aligned_cols=57 Identities=18% Similarity=0.200 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHH---hCCCcEEEEEeCCHHHHHHHH
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALM---MGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~---~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+.....+...+. ..++.+|||+|||+|..+..+++. +.+.++|+++|+|+.+++.|+
T Consensus 67 p~~~~~l~~~l~--~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~ 126 (236)
T 2bm8_A 67 PDTQAVYHDMLW--ELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA 126 (236)
T ss_dssp HHHHHHHHHHHH--HHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG
T ss_pred HHHHHHHHHHHH--hcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh
Confidence 455555555554 345679999999999999999997 345678999999999988876
No 86
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=1.8e-10 Score=75.29 Aligned_cols=60 Identities=13% Similarity=0.213 Sum_probs=47.2
Q ss_pred HHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc
Q psy5585 38 LELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALL 100 (110)
Q Consensus 38 ~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 100 (110)
+..+...+.++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.++++....++.++
T Consensus 47 ~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~~~~~~~~ 106 (245)
T 3ggd_A 47 LPRFELLFNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENTAANISYR 106 (245)
T ss_dssp HHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSCCTTEEEE
T ss_pred HHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCcccCceEE
Confidence 333333356778999999999999999999853 599999999999999988754444444
No 87
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.11 E-value=4.9e-10 Score=76.40 Aligned_cols=53 Identities=17% Similarity=0.203 Sum_probs=47.8
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|..+..+++..+..++|+++|+|+.+++.+++++...++
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~ 168 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGV 168 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCC
Confidence 56788999999999999999999875557899999999999999999988765
No 88
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.10 E-value=1.8e-10 Score=76.37 Aligned_cols=52 Identities=23% Similarity=0.464 Sum_probs=45.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH------HHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD------LVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~------~~~~a~~~~~~~~ 96 (110)
+.++.+|||+|||+|..+..+++..+++++|+|+|+|+. +++.+++++...+
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~ 98 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP 98 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC
Confidence 567889999999999999999999766578999999997 9999999987643
No 89
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.10 E-value=2.4e-10 Score=75.31 Aligned_cols=61 Identities=21% Similarity=0.358 Sum_probs=50.2
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.....+++.+. ..++.+|||+|||+|.++..+++.. . +|+++|+|+.+++.+++++...+.
T Consensus 24 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~l~~a~~~~~~~~~ 84 (260)
T 1vl5_A 24 SDLAKLMQIAA--LKGNEEVLDVATGGGHVANAFAPFV-K--KVVAFDLTEDILKVARAFIEGNGH 84 (260)
T ss_dssp CCHHHHHHHHT--CCSCCEEEEETCTTCHHHHHHGGGS-S--EEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhC--CCCCCEEEEEeCCCCHHHHHHHHhC-C--EEEEEeCCHHHHHHHHHHHHhcCC
Confidence 44455666664 5678899999999999999999985 3 699999999999999999876553
No 90
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.10 E-value=3e-10 Score=76.51 Aligned_cols=51 Identities=18% Similarity=0.226 Sum_probs=45.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...++
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~ 120 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDS 120 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCC
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCC
Confidence 45778999999999999999999864 4799999999999999999988654
No 91
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.10 E-value=4.7e-10 Score=75.47 Aligned_cols=51 Identities=25% Similarity=0.263 Sum_probs=44.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
..++.+|||+|||+|..+..+++.+.+..+|+|+|+|+.+++.+++++...
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 84 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS 84 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 357789999999999999999987534568999999999999999998765
No 92
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.10 E-value=5.3e-10 Score=72.92 Aligned_cols=61 Identities=20% Similarity=0.093 Sum_probs=49.3
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+...+...+.. ..++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++++...++
T Consensus 65 ~~~~l~~~~~~-~~~~~~vLD~gcG~G~~~~~la~~~---~~v~~vD~s~~~~~~a~~~~~~~~~ 125 (241)
T 3gdh_A 65 IAEHIAGRVSQ-SFKCDVVVDAFCGVGGNTIQFALTG---MRVIAIDIDPVKIALARNNAEVYGI 125 (241)
T ss_dssp HHHHHHHHHHH-HSCCSEEEETTCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhh-ccCCCEEEECccccCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHHcCC
Confidence 34445555432 3377899999999999999999984 3699999999999999999987764
No 93
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.09 E-value=4.1e-10 Score=75.30 Aligned_cols=53 Identities=17% Similarity=0.205 Sum_probs=47.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+.++.+|||+|||+|.+++.+++..+ .++|+++|+++.+++.++++++.+++.
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~ 169 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLN 169 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCS
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 56788999999999999999999964 468999999999999999999987654
No 94
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.09 E-value=1.1e-10 Score=76.23 Aligned_cols=52 Identities=23% Similarity=0.334 Sum_probs=41.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCC-HHHHHHH---HHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHI-PDLVNSS---VKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s-~~~~~~a---~~~~~~~~~ 97 (110)
..++.+|||+|||+|..+..+++. .+..+|+|+|+| +.|++.| +++....++
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~ 77 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGL 77 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCC
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCC
Confidence 457789999999999999999976 355789999999 7777776 766655544
No 95
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.09 E-value=7.4e-10 Score=77.08 Aligned_cols=67 Identities=21% Similarity=0.210 Sum_probs=54.0
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
....+.+...++... ..++.+|||+|||+|.+++.++... ..++|+|+|+|+.+++.|++++..+++
T Consensus 200 a~l~~~la~~l~~~~---~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~gl 266 (373)
T 3tm4_A 200 AHLKASIANAMIELA---ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAAGV 266 (373)
T ss_dssp TCCCHHHHHHHHHHH---TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCccHHHHHHHHHhh---cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHcCC
Confidence 334455556555554 4677899999999999999999985 445799999999999999999988765
No 96
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.08 E-value=6.4e-10 Score=70.70 Aligned_cols=63 Identities=22% Similarity=0.344 Sum_probs=48.6
Q ss_pred cChhhHHHHHHHHHhh-cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 29 SAPHMHAHALELLREH-LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~-~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
........++..+... ..++.+|||+|||+|.++..+++. +. .+|+|+|+|+.+++.+++++.
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~~-~~v~~vD~~~~~~~~a~~~~~ 95 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-GA-ESVTAFDIDPDAIETAKRNCG 95 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-TB-SEEEEEESCHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-CC-CEEEEEECCHHHHHHHHHhcC
Confidence 3445555555555321 346789999999999999999987 33 479999999999999999876
No 97
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.08 E-value=9.2e-10 Score=73.41 Aligned_cols=61 Identities=23% Similarity=0.400 Sum_probs=50.2
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++..+. +.++.+|||+|||+|.++..+++..++.++|+++|+++.+++.+++++...++
T Consensus 102 ~~i~~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 162 (277)
T 1o54_A 102 SFIAMMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGL 162 (277)
T ss_dssp HHHHHHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCC
Confidence 33444443 56788999999999999999999865567899999999999999999877653
No 98
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.08 E-value=4e-10 Score=72.70 Aligned_cols=52 Identities=23% Similarity=0.334 Sum_probs=45.5
Q ss_pred hcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 44 HLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 44 ~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++++.+|||+|||+|..+..+++. +. +|+++|+|+.+++.++++....+..
T Consensus 27 ~~~~~~~vLdiG~G~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~~~~~~~~ 78 (235)
T 3sm3_A 27 YLQEDDEILDIGCGSGKISLELASK-GY--SVTGIDINSEAIRLAETAARSPGLN 78 (235)
T ss_dssp HCCTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHTTCCSCC
T ss_pred hCCCCCeEEEECCCCCHHHHHHHhC-CC--eEEEEECCHHHHHHHHHHHHhcCCc
Confidence 3568889999999999999999998 33 6999999999999999998876653
No 99
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.08 E-value=3e-10 Score=74.43 Aligned_cols=50 Identities=14% Similarity=0.081 Sum_probs=43.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
..++.+|||||||+|..+..+++.. + .++++||+|+.+++.|+++....+
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~-~-~~v~~id~~~~~~~~a~~~~~~~~ 107 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQT 107 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSC-E-EEEEEEECCHHHHHHHHHHGGGCS
T ss_pred ccCCCeEEEECCCccHHHHHHHHhC-C-cEEEEEeCCHHHHHHHHHHHhhCC
Confidence 4678899999999999999998874 3 479999999999999999887654
No 100
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.08 E-value=8e-10 Score=72.56 Aligned_cols=60 Identities=22% Similarity=0.390 Sum_probs=45.5
Q ss_pred hhHHHHHHHHH-hhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 32 HMHAHALELLR-EHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 32 ~~~~~~~~~l~-~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
.....++..+. ..+.++.+|||+|||+|..+..+++..+++++|+|+|+++.|++...+.
T Consensus 60 kla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~ 120 (232)
T 3id6_C 60 KLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLV 120 (232)
T ss_dssp HHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHH
Confidence 33444444432 1256889999999999999999999988889999999999887544333
No 101
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.08 E-value=5.7e-10 Score=75.61 Aligned_cols=52 Identities=23% Similarity=0.225 Sum_probs=42.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|.++..++... ..++|+|+|+|+++++.|+++++..++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl 171 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGV 171 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTC
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCC
Confidence 6788999999999987664444332 346899999999999999999987654
No 102
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.07 E-value=4.4e-10 Score=72.15 Aligned_cols=54 Identities=22% Similarity=0.303 Sum_probs=45.4
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
..++..+. ..++.+|||+|||+|..+..+++. +. +++|+|+|+.+++.++++..
T Consensus 35 ~~~l~~~~--~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~~~ 88 (220)
T 3hnr_A 35 EDILEDVV--NKSFGNVLEFGVGTGNLTNKLLLA-GR--TVYGIEPSREMRMIAKEKLP 88 (220)
T ss_dssp HHHHHHHH--HTCCSEEEEECCTTSHHHHHHHHT-TC--EEEEECSCHHHHHHHHHHSC
T ss_pred HHHHHHhh--ccCCCeEEEeCCCCCHHHHHHHhC-CC--eEEEEeCCHHHHHHHHHhCC
Confidence 44556555 457789999999999999999998 33 69999999999999998876
No 103
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.07 E-value=2.9e-10 Score=74.60 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=41.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
..++.+|||||||+|.++..+++.. +...|+|+|+|+.|++.|++++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~ 92 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRA 92 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHH
Confidence 3466789999999999999999985 556899999999999999988754
No 104
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.07 E-value=6.3e-10 Score=72.40 Aligned_cols=50 Identities=16% Similarity=0.292 Sum_probs=43.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+.++.+|||+|||+|.++..+++..++.++|+|+|+|+.+++.+.++.+.
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~ 124 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK 124 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc
Confidence 45678999999999999999999976557899999999888877777665
No 105
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.07 E-value=6.9e-10 Score=71.96 Aligned_cols=48 Identities=23% Similarity=0.321 Sum_probs=41.6
Q ss_pred HHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 41 LREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 41 l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+...+.++.+|||+|||+|..+..+++. +. +|+++|+|+.+++.++++
T Consensus 42 ~~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~ 89 (226)
T 3m33_A 42 LSRLLTPQTRVLEAGCGHGPDAARFGPQ-AA--RWAAYDFSPELLKLARAN 89 (226)
T ss_dssp HHHHCCTTCEEEEESCTTSHHHHHHGGG-SS--EEEEEESCHHHHHHHHHH
T ss_pred HHhcCCCCCeEEEeCCCCCHHHHHHHHc-CC--EEEEEECCHHHHHHHHHh
Confidence 3333567889999999999999999998 33 799999999999999988
No 106
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.07 E-value=4.1e-10 Score=78.53 Aligned_cols=52 Identities=27% Similarity=0.279 Sum_probs=46.1
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++.+|||+|||+|.+++.+++.. +..+|+++|+|+.+++.+++++..+++.
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~ 272 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPE 272 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGG
T ss_pred cCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCC
Confidence 345799999999999999999995 5568999999999999999999987743
No 107
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.07 E-value=3.8e-10 Score=73.40 Aligned_cols=50 Identities=14% Similarity=0.306 Sum_probs=43.8
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
+.++.+|||+|||+|..+..+++..+ .++|+|+|+|+.+++.+++++...
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~ 121 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER 121 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC
Confidence 45678999999999999999999975 568999999999999999887653
No 108
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.07 E-value=5.4e-10 Score=74.69 Aligned_cols=54 Identities=19% Similarity=0.206 Sum_probs=47.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|..+..++...+..++|+++|+++.+++.+++++...++.
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~ 134 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL 134 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC
Confidence 567889999999999999999998644478999999999999999999887653
No 109
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.06 E-value=4.3e-10 Score=72.80 Aligned_cols=51 Identities=29% Similarity=0.464 Sum_probs=44.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
+.++.+|||+|||+|.++..+++..++.++|+++|+|+.+++.++++++..
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~ 121 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER 121 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc
Confidence 346789999999999999999998765678999999999999998887654
No 110
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.06 E-value=3.8e-10 Score=74.47 Aligned_cols=58 Identities=21% Similarity=0.278 Sum_probs=47.2
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
....+.+.+.....++.+|||+|||+|..+..+++.. . +|+|+|+|+.+++.++++..
T Consensus 36 ~~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~ 93 (263)
T 3pfg_A 36 EAADLAALVRRHSPKAASLLDVACGTGMHLRHLADSF-G--TVEGLELSADMLAIARRRNP 93 (263)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEETCTTSHHHHHHTTTS-S--EEEEEESCHHHHHHHHHHCT
T ss_pred HHHHHHHHHHhhCCCCCcEEEeCCcCCHHHHHHHHcC-C--eEEEEECCHHHHHHHHhhCC
Confidence 3344555555555677899999999999999999984 3 69999999999999998865
No 111
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.06 E-value=2.2e-10 Score=73.71 Aligned_cols=52 Identities=23% Similarity=0.213 Sum_probs=42.6
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
...+..+. ..++.+|||+|||+|..+..+++.. +..+|+|+|+|+.|++.+.
T Consensus 17 ~~~~~~l~--~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~ 68 (218)
T 3mq2_A 17 DAEFEQLR--SQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKIS 68 (218)
T ss_dssp HHHHHHHH--TTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHH
T ss_pred HHHHHHhh--ccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Confidence 33455555 6678899999999999999999984 5578999999999888643
No 112
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.06 E-value=7.7e-10 Score=74.42 Aligned_cols=53 Identities=19% Similarity=0.221 Sum_probs=47.7
Q ss_pred hcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 44 HLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 44 ~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
...++.+|||+|||+|.+++.+++.. . ++|+++|+|+.+++.+++|++.+++.
T Consensus 122 ~~~~g~~VlD~~aG~G~~~i~~a~~g-~-~~V~avD~np~a~~~~~~N~~~N~v~ 174 (278)
T 3k6r_A 122 VAKPDELVVDMFAGIGHLSLPIAVYG-K-AKVIAIEKDPYTFKFLVENIHLNKVE 174 (278)
T ss_dssp HCCTTCEEEETTCTTTTTTHHHHHHT-C-CEEEEECCCHHHHHHHHHHHHHTTCT
T ss_pred hcCCCCEEEEecCcCcHHHHHHHHhc-C-CeEEEEECCHHHHHHHHHHHHHcCCC
Confidence 36788999999999999999999984 3 47999999999999999999998874
No 113
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.05 E-value=8.8e-11 Score=79.10 Aligned_cols=50 Identities=30% Similarity=0.451 Sum_probs=41.7
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.++.+|||+|||+|..+..+++.++ ..+|+|+|+|+.+++.|++++....
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 3678999999999999999999974 3589999999999999999877654
No 114
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.05 E-value=1.2e-09 Score=70.34 Aligned_cols=60 Identities=17% Similarity=0.225 Sum_probs=48.5
Q ss_pred HHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 34 HAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 34 ~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
...+.+.+...+.++.+|||+|||+|..+..+++.. + +++++|+|+.+++.++++....+
T Consensus 25 ~~~~~~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~~ 84 (227)
T 1ve3_A 25 IETLEPLLMKYMKKRGKVLDLACGVGGFSFLLEDYG-F--EVVGVDISEDMIRKAREYAKSRE 84 (227)
T ss_dssp HHHHHHHHHHSCCSCCEEEEETCTTSHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCeEEEEeccCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHhcC
Confidence 344455555455667899999999999999999984 4 69999999999999999886643
No 115
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.05 E-value=4.1e-10 Score=75.12 Aligned_cols=51 Identities=22% Similarity=0.408 Sum_probs=45.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
+.++.+|||+|||+|..+..+++...+.++|+++|+++.+++.+++++...
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 158 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEF 158 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTT
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 457789999999999999999998545568999999999999999998776
No 116
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.05 E-value=4.9e-10 Score=74.11 Aligned_cols=51 Identities=20% Similarity=0.335 Sum_probs=45.2
Q ss_pred cC-CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LE-NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~-~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.. ++.+|||+|||+|..++.+++.. + ++|+|+|+++.+++.|++++..++.
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~-~-~~v~gvDi~~~~~~~a~~n~~~~~~ 97 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRT-K-AKIVGVEIQERLADMAKRSVAYNQL 97 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTC-C-CEEEEECCSHHHHHHHHHHHHHTTC
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhc-C-CcEEEEECCHHHHHHHHHHHHHCCC
Confidence 45 67899999999999999999985 3 3899999999999999999988764
No 117
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.05 E-value=6.6e-10 Score=69.59 Aligned_cols=61 Identities=15% Similarity=0.144 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.....+++.+. ..++.+|||+|||+|..+..+++. + .+++++|+++.+++.+++++...+.
T Consensus 39 ~~~~~l~~~~~--~~~~~~vLdiG~G~G~~~~~~~~~-~--~~v~~~D~~~~~~~~a~~~~~~~~~ 99 (194)
T 1dus_A 39 KGTKILVENVV--VDKDDDILDLGCGYGVIGIALADE-V--KSTTMADINRRAIKLAKENIKLNNL 99 (194)
T ss_dssp HHHHHHHHHCC--CCTTCEEEEETCTTSHHHHHHGGG-S--SEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHcc--cCCCCeEEEeCCCCCHHHHHHHHc-C--CeEEEEECCHHHHHHHHHHHHHcCC
Confidence 34455555553 457789999999999999999988 3 3799999999999999999887654
No 118
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.05 E-value=3.5e-10 Score=73.56 Aligned_cols=61 Identities=25% Similarity=0.405 Sum_probs=48.0
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALL 100 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 100 (110)
++..+...+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++....++.++
T Consensus 43 ~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~ 103 (242)
T 3l8d_A 43 IIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT-GY--KAVGVDISEVMIQKGKERGEGPDLSFI 103 (242)
T ss_dssp HHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCHHHHHHHHTTTCBTTEEEE
T ss_pred HHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc-CC--eEEEEECCHHHHHHHHhhcccCCceEE
Confidence 44555545678889999999999999999998 33 699999999999999987544444433
No 119
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.05 E-value=8.7e-10 Score=72.97 Aligned_cols=50 Identities=26% Similarity=0.333 Sum_probs=44.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.+++++...+
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~ 108 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATARD--VRVTGISISRPQVNQANARATAAG 108 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHSC--CEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcC--CEEEEEeCCHHHHHHHHHHHHhcC
Confidence 45778999999999999999999753 489999999999999999987654
No 120
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.04 E-value=4.2e-10 Score=74.72 Aligned_cols=49 Identities=16% Similarity=0.268 Sum_probs=43.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
..++.+|||+|||+|.+++.++... +..+|+++|+++.+++.|++++..
T Consensus 34 ~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~ 82 (260)
T 2ozv_A 34 DDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLEL 82 (260)
T ss_dssp CCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTS
T ss_pred ccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHh
Confidence 3466799999999999999999995 456899999999999999999887
No 121
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.04 E-value=6.8e-10 Score=78.63 Aligned_cols=51 Identities=25% Similarity=0.386 Sum_probs=44.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|.+++.+++.. .+|+|+|+|+.+++.|++++..+++.
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~~---~~V~gvD~s~~al~~A~~n~~~~~~~ 334 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQA---ASVVGVEGVPALVEKGQQNARLNGLQ 334 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred CCCCCEEEECCCCCCHHHHHHHhhC---CEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 3467799999999999999999983 36999999999999999999887643
No 122
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.03 E-value=7.1e-10 Score=77.26 Aligned_cols=51 Identities=31% Similarity=0.522 Sum_probs=45.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
..++.+|||+|||+|..+..+++..++.++|+|+|+|+.+++.+++++...
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~ 131 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYH 131 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHH
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHh
Confidence 346789999999999999999999766678999999999999999987654
No 123
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.03 E-value=8.3e-10 Score=71.94 Aligned_cols=50 Identities=14% Similarity=0.081 Sum_probs=42.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
..++.+|||+|||+|..+..+++.. . .+|+|+|+|+.|++.|+++....+
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~ 107 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAP-I-DEHWIIECNDGVFQRLRDWAPRQT 107 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSC-E-EEEEEEECCHHHHHHHHHHGGGCS
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcC-C-CeEEEEcCCHHHHHHHHHHHHhcC
Confidence 4567899999999999999997753 3 379999999999999999886643
No 124
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.02 E-value=1.7e-09 Score=72.47 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=44.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++.+|||+|||+|..+..+++..+ .+|+|+|+|+.+++.++++....+
T Consensus 80 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~ 129 (297)
T 2o57_A 80 LQRQAKGLDLGAGYGGAARFLVRKFG--VSIDCLNIAPVQNKRNEEYNNQAG 129 (297)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHhcC
Confidence 46778999999999999999999864 379999999999999999987654
No 125
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.02 E-value=2.6e-10 Score=75.84 Aligned_cols=51 Identities=24% Similarity=0.320 Sum_probs=41.6
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+++.+........+|||+|||+|..+..+++.+ . +|+|+|+|+.|++.|++
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~-~--~v~gvD~s~~ml~~a~~ 79 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFF-E--RVHAVDPGEAQIRQALR 79 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC-S--EEEEEESCHHHHHTCCC
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC-C--EEEEEeCcHHhhhhhhh
Confidence 344554445566799999999999999999985 3 59999999999988764
No 126
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.02 E-value=1.1e-09 Score=69.08 Aligned_cols=57 Identities=18% Similarity=0.207 Sum_probs=46.3
Q ss_pred HHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 36 HALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 36 ~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+++.+. ..++.+|||+|||+|..+..+++. +. +++++|+|+.+++.+++++...+.
T Consensus 23 ~l~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~~~~~~~ 79 (199)
T 2xvm_A 23 EVLEAVK--VVKPGKTLDLGCGNGRNSLYLAAN-GY--DVDAWDKNAMSIANVERIKSIENL 79 (199)
T ss_dssp HHHHHTT--TSCSCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHhh--ccCCCeEEEEcCCCCHHHHHHHHC-CC--eEEEEECCHHHHHHHHHHHHhCCC
Confidence 3444443 446779999999999999999988 33 699999999999999999876543
No 127
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.02 E-value=1e-09 Score=70.07 Aligned_cols=47 Identities=21% Similarity=0.352 Sum_probs=41.6
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+|||+|||+|..+..+++. +..+++++|+|+.+++.+++++...+.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~ 91 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANL 91 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccc
Confidence 39999999999999999998 335899999999999999999887653
No 128
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.02 E-value=1.2e-09 Score=79.67 Aligned_cols=49 Identities=27% Similarity=0.417 Sum_probs=43.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++.+|||||||.|.++..|++. |. .|+|||.++.+++.|+..+...+
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~-ga--~V~giD~~~~~i~~a~~~a~~~~ 112 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK-GA--TIVGIDFQQENINVCRALAEENP 112 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHTST
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC-CC--EEEEECCCHHHHHHHHHHHHhcC
Confidence 456679999999999999999998 45 59999999999999999887765
No 129
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.01 E-value=9.8e-10 Score=73.33 Aligned_cols=50 Identities=26% Similarity=0.269 Sum_probs=43.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++.+|||+|||+|..+..+++..+. +|+|+|+|+.+++.+++++...+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~~--~v~gvd~s~~~~~~a~~~~~~~~ 111 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYDV--NVVGLTLSKNQANHVQQLVANSE 111 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTCC
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcC
Confidence 457789999999999999999976554 79999999999999999987654
No 130
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.01 E-value=1.3e-09 Score=71.42 Aligned_cols=51 Identities=29% Similarity=0.466 Sum_probs=45.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|..+..+++..+ ++|+|+|+|+.+++.+++++...++
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~ 94 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANC 94 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCC
Confidence 45678999999999999999999963 3799999999999999999888664
No 131
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.00 E-value=1.1e-09 Score=72.53 Aligned_cols=51 Identities=24% Similarity=0.365 Sum_probs=44.8
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|..+..+++. ..++|+|+|+|+.+++.+++++...++
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~ 94 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGL 94 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 457789999999999999999998 335899999999999999999887654
No 132
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.00 E-value=1.4e-09 Score=77.70 Aligned_cols=65 Identities=26% Similarity=0.248 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.....+...+. ..++.+|||+|||+|..+..++...+..++|+++|+|+.+++.+++++...++.
T Consensus 88 ~ss~l~a~~L~--~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~ 152 (464)
T 3m6w_A 88 PSAQAVGVLLD--PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP 152 (464)
T ss_dssp TTTHHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhcC--cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe
Confidence 33333444444 567889999999999999999999766679999999999999999999987754
No 133
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.00 E-value=9.2e-10 Score=74.31 Aligned_cols=56 Identities=18% Similarity=0.144 Sum_probs=46.1
Q ss_pred HhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 42 REHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 42 ~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
...+.++.+|||+|||+|..+..++....+..+|+|+|+|+.+++.+++++...+.
T Consensus 113 ~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~ 168 (305)
T 3ocj_A 113 QRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHAL 168 (305)
T ss_dssp HHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTT
T ss_pred HhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCC
Confidence 33467888999999999999999963324556899999999999999999876543
No 134
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.00 E-value=1.7e-09 Score=72.32 Aligned_cols=57 Identities=25% Similarity=0.309 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
.....+...+. ..++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++..
T Consensus 44 ~~~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~gvD~s~~~l~~a~~~~~ 100 (293)
T 3thr_A 44 EYKAWLLGLLR--QHGCHRVLDVACGTGVDSIMLVEE-GF--SVTSVDASDKMLKYALKERW 100 (293)
T ss_dssp HHHHHHHHHHH--HTTCCEEEETTCTTSHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhc--ccCCCEEEEecCCCCHHHHHHHHC-CC--eEEEEECCHHHHHHHHHhhh
Confidence 34444555554 456789999999999999999998 34 69999999999999998763
No 135
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.00 E-value=1.3e-09 Score=69.45 Aligned_cols=56 Identities=20% Similarity=0.132 Sum_probs=46.4
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+...+...+.++.+|||+|||+|.++..+++.. . .+|+++|+|+.+++.++++...
T Consensus 32 ~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~-~-~~v~~~D~s~~~~~~a~~~~~~ 87 (215)
T 2pxx_A 32 FRALLEPELRPEDRILVLGCGNSALSYELFLGG-F-PNVTSVDYSSVVVAAMQACYAH 87 (215)
T ss_dssp HHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTT-C-CCEEEEESCHHHHHHHHHHTTT
T ss_pred HHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcC-C-CcEEEEeCCHHHHHHHHHhccc
Confidence 455555456778899999999999999999984 3 2699999999999999988754
No 136
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.00 E-value=1.6e-09 Score=73.77 Aligned_cols=60 Identities=18% Similarity=0.245 Sum_probs=51.3
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
....+. +.++.+|||+|||+|..+..++...+..++|+++|+++.+++.++++++..++.
T Consensus 94 ~~~~l~--~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~ 153 (309)
T 2b9e_A 94 PAMLLD--PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS 153 (309)
T ss_dssp HHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred HHHHhC--CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 334443 567889999999999999999998766689999999999999999999887654
No 137
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.00 E-value=1.5e-09 Score=73.02 Aligned_cols=48 Identities=13% Similarity=0.133 Sum_probs=41.8
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+..+|||+|||+|..+..+++.. . +|+|+|+|+.+++.+++++...+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~~~ 128 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDLG-W--EVTALELSTSVLAAFRKRLAEAP 128 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTTT-C--CEEEEESCHHHHHHHHHHHHTSC
T ss_pred CCCCcEEEEeccCCHHHHHHHHcC-C--eEEEEECCHHHHHHHHHHHhhcc
Confidence 345599999999999999999983 3 59999999999999999988754
No 138
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.99 E-value=1.8e-09 Score=72.03 Aligned_cols=58 Identities=19% Similarity=0.311 Sum_probs=47.8
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+++.+. ..++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.+++++...+.
T Consensus 110 ~~~~~~~~--~~~~~~vLD~GcG~G~~~~~l~~~-g~--~v~~vD~s~~~~~~a~~~~~~~~~ 167 (286)
T 3m70_A 110 GDVVDAAK--IISPCKVLDLGCGQGRNSLYLSLL-GY--DVTSWDHNENSIAFLNETKEKENL 167 (286)
T ss_dssp HHHHHHHH--HSCSCEEEEESCTTCHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhh--ccCCCcEEEECCCCCHHHHHHHHC-CC--eEEEEECCHHHHHHHHHHHHHcCC
Confidence 34455554 347789999999999999999998 33 699999999999999999887643
No 139
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.99 E-value=7.1e-10 Score=72.01 Aligned_cols=58 Identities=12% Similarity=0.207 Sum_probs=46.2
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
....+++.+.. ..++.+|||+|||+|..+..+++.. . +|+|+|+|+.+++.+++++..
T Consensus 29 ~~~~~~~~l~~-~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~gvD~s~~~~~~a~~~~~~ 86 (250)
T 2p7i_A 29 MHPFMVRAFTP-FFRPGNLLELGSFKGDFTSRLQEHF-N--DITCVEASEEAISHAQGRLKD 86 (250)
T ss_dssp HHHHHHHHHGG-GCCSSCEEEESCTTSHHHHHHTTTC-S--CEEEEESCHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHh-hcCCCcEEEECCCCCHHHHHHHHhC-C--cEEEEeCCHHHHHHHHHhhhC
Confidence 33455555542 3466789999999999999999884 4 599999999999999988754
No 140
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.99 E-value=1.9e-09 Score=73.01 Aligned_cols=49 Identities=12% Similarity=0.136 Sum_probs=43.0
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++...
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~V~~VDid~~vi~~ar~~~~~~ 130 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNH 130 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCT-TCCEEEEECSCTTHHHHHHHHCHHH
T ss_pred CCCCEEEEEeCChhHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHhhhhc
Confidence 456899999999999999999974 4468999999999999999998754
No 141
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.99 E-value=1.5e-09 Score=77.38 Aligned_cols=63 Identities=19% Similarity=0.162 Sum_probs=53.0
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccc
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKAL 99 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 99 (110)
......+. ..++.+|||+|||+|..+..++...+..++|+++|+++.+++.+++++...++.+
T Consensus 95 ~l~~~~L~--~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n 157 (456)
T 3m4x_A 95 MIVGTAAA--AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN 157 (456)
T ss_dssp HHHHHHHC--CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHcC--CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc
Confidence 33444444 5678899999999999999999987666799999999999999999999887653
No 142
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.99 E-value=2.1e-09 Score=74.64 Aligned_cols=61 Identities=15% Similarity=0.204 Sum_probs=47.6
Q ss_pred HHHHHHHHhhcC-CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 35 AHALELLREHLE-NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 35 ~~~~~~l~~~~~-~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..+...+...+. .+.+|||+|||+|.+++.+++.. .+|+|+|+|+.+++.|++|++.++++
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~~---~~V~gvd~~~~ai~~a~~n~~~ng~~ 261 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNF---DRVLATEIAKPSVAAAQYNIAANHID 261 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGGS---SEEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhcC---CEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 444444433232 35789999999999999999864 26999999999999999999887653
No 143
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.99 E-value=6.7e-09 Score=68.20 Aligned_cols=48 Identities=25% Similarity=0.306 Sum_probs=41.8
Q ss_pred CCCeEEEecCCcChhHHHHHHH--hCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALM--MGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~--~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
++.+|||+|||+|.+++.+++. . +..+|+|+|+|+.+++.|++++...
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~-~~~~v~gvDis~~~l~~A~~~~~~~ 100 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRR-SLRQVIASDVDPAPLELAAKNLALL 100 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGG-GEEEEEEEESCHHHHHHHHHHHHTT
T ss_pred CCCeEEECCCCCCHHHHHHHHHhcc-CCCeEEEEECCHHHHHHHHHHHHHh
Confidence 4579999999999999999987 3 3357999999999999999888765
No 144
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.99 E-value=1.5e-09 Score=72.82 Aligned_cols=46 Identities=26% Similarity=0.430 Sum_probs=40.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeC-CHHHHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDH-IPDLVNSSVKNVE 93 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~-s~~~~~~a~~~~~ 93 (110)
.++.+|||+|||+|.+++.+++.. . ++|+++|+ |+.+++.+++++.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~-~-~~v~~~D~s~~~~~~~a~~n~~ 124 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAG-A-DQVVATDYPDPEILNSLESNIR 124 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTT-C-SEEEEEECSCHHHHHHHHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcC-C-CEEEEEeCCCHHHHHHHHHHHH
Confidence 467899999999999999999873 3 47999999 8999999999983
No 145
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.98 E-value=2.3e-09 Score=73.74 Aligned_cols=50 Identities=26% Similarity=0.437 Sum_probs=43.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|.++..+++. +. .+|+|+|+|+ +++.|+++++.++.
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~-~~v~gvD~s~-~~~~a~~~~~~~~~ 111 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GA-KKVLGVDQSE-ILYQAMDIIRLNKL 111 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEESST-HHHHHHHHHHHTTC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CC-CEEEEEChHH-HHHHHHHHHHHcCC
Confidence 457789999999999999999998 33 4799999996 99999999887654
No 146
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.98 E-value=2.2e-09 Score=69.66 Aligned_cols=61 Identities=15% Similarity=0.135 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
....+...+.....++.+|||+|||+|..+..+++. +. +++++|+|+.+++.++++....+
T Consensus 23 ~~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~-~~--~~~~~D~s~~~~~~a~~~~~~~~ 83 (246)
T 1y8c_A 23 WSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK-FK--NTWAVDLSQEMLSEAENKFRSQG 83 (246)
T ss_dssp HHHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG-SS--EEEEECSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC-CC--cEEEEECCHHHHHHHHHHHhhcC
Confidence 444555555532336789999999999999999988 33 69999999999999999987653
No 147
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.98 E-value=1.7e-09 Score=71.78 Aligned_cols=52 Identities=25% Similarity=0.348 Sum_probs=45.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++...++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~ 86 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGI 86 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 3577899999999999999999994 556899999999999999999877654
No 148
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.98 E-value=1e-09 Score=73.47 Aligned_cols=64 Identities=19% Similarity=0.255 Sum_probs=50.0
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.....+.+.+. .+.++.+|||+|||+|..+..+++.++...+|+|+|+|+.+++.+++++...+
T Consensus 8 ~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~ 71 (284)
T 3gu3_A 8 DYVSFLVNTVW-KITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLP 71 (284)
T ss_dssp HHHHHHHHTTS-CCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHh-ccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 44444444442 14577899999999999999999986434689999999999999999987653
No 149
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.98 E-value=2.8e-09 Score=76.44 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=47.4
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++.+|||+|||+|..+..+++..+..++|+++|+|+.+++.+++++...++.
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~ 168 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS 168 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 7889999999999999999999765679999999999999999999887654
No 150
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.98 E-value=1.1e-09 Score=74.28 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=39.4
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
++.+|||+|||+|..+..++.... .+|+|+|+|+.|++.|+++....+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~--~~v~GiD~S~~~l~~A~~~~~~~~ 95 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEI--ALLVATDPDADAIARGNERYNKLN 95 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHC
T ss_pred CCCeEEEEecCCcHhHHHHHhcCC--CeEEEEECCHHHHHHHHHHHHhcc
Confidence 367999999999987776666522 479999999999999999887654
No 151
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.97 E-value=1.3e-09 Score=73.79 Aligned_cols=50 Identities=16% Similarity=0.203 Sum_probs=44.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++.+|||+|||+|..+..+++..+. +|+|+|+|+.+++.+++++...+
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~~ 137 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASID 137 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTSC
T ss_pred CCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhcC
Confidence 357789999999999999999998643 79999999999999999987754
No 152
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.97 E-value=2.7e-09 Score=75.49 Aligned_cols=62 Identities=23% Similarity=0.230 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.....++..+.. +.++.+|||+|||+|.+++.+++.. . +|+|+|+|+.+++.|++++..+++
T Consensus 276 ~~~e~l~~~~~~-~~~~~~VLDlgcG~G~~sl~la~~~-~--~V~gvD~s~~ai~~A~~n~~~ngl 337 (425)
T 2jjq_A 276 YQAVNLVRKVSE-LVEGEKILDMYSGVGTFGIYLAKRG-F--NVKGFDSNEFAIEMARRNVEINNV 337 (425)
T ss_dssp HHHHHHHHHHHH-HCCSSEEEEETCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhhc-cCCCCEEEEeeccchHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHHcCC
Confidence 344445555543 5677899999999999999999873 3 699999999999999999988764
No 153
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.97 E-value=3.4e-09 Score=68.62 Aligned_cols=55 Identities=20% Similarity=0.378 Sum_probs=45.7
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
..+.+.+.....++.+|||+|||+|..+..+++.+. +++++|+|+.+++.++++.
T Consensus 28 ~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~ 82 (239)
T 3bxo_A 28 SDIADLVRSRTPEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL 82 (239)
T ss_dssp HHHHHHHHHHCTTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC
Confidence 345555554456778999999999999999999963 6999999999999999875
No 154
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.97 E-value=4e-10 Score=73.88 Aligned_cols=52 Identities=23% Similarity=0.294 Sum_probs=43.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALL 100 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 100 (110)
++.+|||+|||+|..+..+++.. . .+|+|+|+|+.+++.++++....++.++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 95 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHG-A-KKVLGIDLSERMLTEAKRKTTSPVVCYE 95 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHHCCCTTEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcC-C-CEEEEEECCHHHHHHHHHhhccCCeEEE
Confidence 67899999999999999999984 3 2799999999999999988763333333
No 155
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.97 E-value=4.5e-10 Score=73.81 Aligned_cols=48 Identities=29% Similarity=0.425 Sum_probs=42.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+.++.+|||+|||+|..+..+++.++ .+|+|+|+|+.+++.++++...
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~ 100 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKYG--AHTHGIDICSNIVNMANERVSG 100 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHTCCS
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHhhc
Confidence 45778999999999999999999863 4799999999999999988754
No 156
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.97 E-value=2.1e-09 Score=70.39 Aligned_cols=48 Identities=23% Similarity=0.404 Sum_probs=42.1
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++....+
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~-~~--~v~gvD~s~~~l~~a~~~~~~~~ 87 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER-GY--EVVGLDLHEEMLRVARRKAKERN 87 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHHTT
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC-CC--eEEEEECCHHHHHHHHHHHHhcC
Confidence 45679999999999999999987 33 69999999999999999987654
No 157
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.97 E-value=3.3e-09 Score=70.75 Aligned_cols=50 Identities=22% Similarity=0.270 Sum_probs=42.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.+++++...++
T Consensus 66 ~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~gvD~s~~~~~~a~~~~~~~~~ 115 (285)
T 4htf_A 66 GPQKLRVLDAGGGEGQTAIKMAER-GH--QVILCDLSAQMIDRAKQAAEAKGV 115 (285)
T ss_dssp CSSCCEEEEETCTTCHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHC-CC
T ss_pred CCCCCEEEEeCCcchHHHHHHHHC-CC--EEEEEECCHHHHHHHHHHHHhcCC
Confidence 345679999999999999999998 33 699999999999999999877543
No 158
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.97 E-value=2.3e-09 Score=72.58 Aligned_cols=50 Identities=12% Similarity=0.159 Sum_probs=44.3
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|..+..+++..+ .+|+|+|+++.+++.+++++...++
T Consensus 116 ~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~ 165 (312)
T 3vc1_A 116 GPDDTLVDAGCGRGGSMVMAHRRFG--SRVEGVTLSAAQADFGNRRARELRI 165 (312)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEecCCCCHHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 4678999999999999999999853 4799999999999999999887653
No 159
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.96 E-value=2.7e-09 Score=68.22 Aligned_cols=46 Identities=26% Similarity=0.512 Sum_probs=40.8
Q ss_pred hcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 44 HLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 44 ~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
.+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++.
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~~ 85 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA-GF--DVDATDGSPELAAEASRRL 85 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHH
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc-CC--eEEEECCCHHHHHHHHHhc
Confidence 3567889999999999999999988 33 6999999999999999886
No 160
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.96 E-value=3.1e-09 Score=68.97 Aligned_cols=56 Identities=23% Similarity=0.371 Sum_probs=45.7
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
..+.+...+.++.+|||+|||+|..+..+++. .+++++|+|+.+++.++++....+
T Consensus 23 ~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~ 78 (243)
T 3d2l_A 23 WVAWVLEQVEPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN 78 (243)
T ss_dssp HHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC
Confidence 34444444667789999999999999998887 369999999999999999887543
No 161
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.96 E-value=2.4e-09 Score=73.83 Aligned_cols=50 Identities=36% Similarity=0.478 Sum_probs=43.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|.++..+++. +. .+|+|+|+| .+++.|+++++.++.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~-~~v~gvD~s-~~l~~a~~~~~~~~~ 113 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GA-RKVIGIECS-SISDYAVKIVKANKL 113 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TC-SEEEEEECS-THHHHHHHHHHHTTC
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CC-CEEEEECcH-HHHHHHHHHHHHcCC
Confidence 457789999999999999999998 33 589999999 599999999988764
No 162
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.95 E-value=1.8e-09 Score=75.25 Aligned_cols=50 Identities=26% Similarity=0.330 Sum_probs=43.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|.++..+++.. . .+|+|+|+| .+++.++++++.++.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~g-~-~~V~gvD~s-~~~~~a~~~~~~~~~ 110 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQAG-A-RKVYAVEAT-KMADHARALVKANNL 110 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHTT-C-SEEEEEESS-TTHHHHHHHHHHTTC
T ss_pred cCCCCEEEEeccCcCHHHHHHHhcC-C-CEEEEEccH-HHHHHHHHHHHHcCC
Confidence 3577899999999999999999983 3 479999999 999999999988764
No 163
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.95 E-value=1.9e-09 Score=67.27 Aligned_cols=51 Identities=20% Similarity=0.151 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
....+++.+.....++.+|||+|||+|.++..+++.. +|+|+|+|+.|++.
T Consensus 9 ~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~ 59 (170)
T 3q87_B 9 DTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES 59 (170)
T ss_dssp HHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT
T ss_pred cHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc
Confidence 3445555565222567799999999999999999985 59999999999987
No 164
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.95 E-value=4.6e-09 Score=71.89 Aligned_cols=50 Identities=30% Similarity=0.416 Sum_probs=43.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|.++..+++. +. .+|+|+|+| .+++.|++++..++.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~-~~v~~vD~s-~~~~~a~~~~~~~~~ 85 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GA-KHVIGVDMS-SIIEMAKELVELNGF 85 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CC-SEEEEEESS-THHHHHHHHHHHTTC
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CC-CEEEEEChH-HHHHHHHHHHHHcCC
Confidence 457789999999999999999987 33 479999999 699999999887654
No 165
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.94 E-value=2.1e-09 Score=69.60 Aligned_cols=49 Identities=14% Similarity=0.263 Sum_probs=43.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.++.+|||+|||+|..+..+++.. +..+++|+|+|+.+++.+++++...
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~ 91 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGN 91 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSC
T ss_pred CCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccC
Confidence 466899999999999999999995 4568999999999999999887654
No 166
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.94 E-value=5.7e-09 Score=68.06 Aligned_cols=50 Identities=26% Similarity=0.482 Sum_probs=44.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|.++..+++. + .+|+++|+++.+++.++++....++
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~-~--~~v~~vD~~~~~~~~a~~~~~~~~~ 138 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV-A--GEVWTFEAVEEFYKTAQKNLKKFNL 138 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH-S--SEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh-C--CEEEEEecCHHHHHHHHHHHHHcCC
Confidence 457789999999999999999998 3 4799999999999999999877653
No 167
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.93 E-value=5.7e-09 Score=70.61 Aligned_cols=59 Identities=22% Similarity=0.126 Sum_probs=44.7
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
..+++.+.....++.+|||+|||+|..+..+++.. ..+++++|+|+.+++.++++....
T Consensus 22 ~~~~~~l~~~~~~~~~VLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~ 80 (313)
T 3bgv_A 22 GEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGR--INKLVCTDIADVSVKQCQQRYEDM 80 (313)
T ss_dssp HHHHHHHHHTC--CCEEEEETCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccCCCCEEEEECCCCcHHHHHHHhcC--CCEEEEEeCCHHHHHHHHHHHHHh
Confidence 33444443223467899999999999999999852 358999999999999999988654
No 168
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.93 E-value=3.7e-09 Score=73.90 Aligned_cols=60 Identities=37% Similarity=0.462 Sum_probs=48.4
Q ss_pred HHHHHHHHhhc----CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 35 AHALELLREHL----ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 35 ~~~~~~l~~~~----~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+++.+...+ .++.+|||+|||+|.++..+++. +. +|+++|+|+.+++.+++++..+++
T Consensus 217 ~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~-g~--~V~gvDis~~al~~A~~n~~~~~~ 280 (381)
T 3dmg_A 217 LLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM-GA--EVVGVEDDLASVLSLQKGLEANAL 280 (381)
T ss_dssp HHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT-TC--EEEEEESBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc-CC--EEEEEECCHHHHHHHHHHHHHcCC
Confidence 44555554322 36779999999999999999998 33 799999999999999999988764
No 169
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.93 E-value=4e-09 Score=69.58 Aligned_cols=55 Identities=24% Similarity=0.290 Sum_probs=44.7
Q ss_pred HHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 36 HALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 36 ~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
.+.+.+...+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++..
T Consensus 43 ~~~~~l~~~~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~gvD~s~~~l~~a~~~~~ 97 (260)
T 2avn_A 43 LIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER-GF--EVVLVDPSKEMLEVAREKGV 97 (260)
T ss_dssp HHHHHHHHHCCSCCEEEEETCTTCHHHHHHHTT-TC--EEEEEESCHHHHHHHHHHTC
T ss_pred HHHHHHHHhcCCCCeEEEeCCCcCHHHHHHHHc-CC--eEEEEeCCHHHHHHHHhhcC
Confidence 344444444557789999999999999999987 33 69999999999999998865
No 170
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.93 E-value=4.4e-09 Score=73.76 Aligned_cols=55 Identities=20% Similarity=0.149 Sum_probs=47.1
Q ss_pred HHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 41 LREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 41 l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+.....++.+|||+|||+|.+++.+++. +. +|+++|+|+.+++.+++++..+++.
T Consensus 208 l~~~~~~g~~VLDlg~GtG~~sl~~a~~-ga--~V~avDis~~al~~a~~n~~~ng~~ 262 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGGFALRAARK-GA--YALAVDKDLEALGVLDQAALRLGLR 262 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred HHHHhcCCCeEEEcccchhHHHHHHHHc-CC--eEEEEECCHHHHHHHHHHHHHhCCC
Confidence 3333455889999999999999999997 44 3999999999999999999988765
No 171
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.93 E-value=5.5e-10 Score=73.86 Aligned_cols=57 Identities=18% Similarity=0.216 Sum_probs=45.2
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
......+...+. ..++.+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++.
T Consensus 20 ~~~~~~l~~~~~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~ 76 (261)
T 3ege_A 20 IRIVNAIINLLN--LPKGSVIADIGAGTGGYSVALANQ---GLFVYAVEPSIVMRQQAVVHP 76 (261)
T ss_dssp HHHHHHHHHHHC--CCTTCEEEEETCTTSHHHHHHHTT---TCEEEEECSCHHHHHSSCCCT
T ss_pred HHHHHHHHHHhC--CCCCCEEEEEcCcccHHHHHHHhC---CCEEEEEeCCHHHHHHHHhcc
Confidence 345555666554 467889999999999999999984 247999999999999876654
No 172
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.93 E-value=5e-09 Score=72.24 Aligned_cols=50 Identities=26% Similarity=0.286 Sum_probs=42.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|.++..+++. +. ++|+|+|+|+ +++.++++++.++.
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~-g~-~~V~~vD~s~-~~~~a~~~~~~~~l 97 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQA-GA-RKIYAVEAST-MAQHAEVLVKSNNL 97 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TC-SEEEEEECST-HHHHHHHHHHHTTC
T ss_pred cCCcCEEEEcCCCccHHHHHHHhC-CC-CEEEEECCHH-HHHHHHHHHHHcCC
Confidence 357789999999999999999987 32 5899999996 88999999887654
No 173
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.93 E-value=4e-09 Score=79.74 Aligned_cols=59 Identities=22% Similarity=0.272 Sum_probs=47.6
Q ss_pred HHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 34 HAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 34 ~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
...+++.+. ..++.+|||+|||+|.++..+++..++..+|+|+|+|+.|++.|++++..
T Consensus 710 le~LLelL~--~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~ 768 (950)
T 3htx_A 710 VEYALKHIR--ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHV 768 (950)
T ss_dssp HHHHHHHHH--HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc--ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhh
Confidence 334455554 45778999999999999999999864445899999999999999987654
No 174
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.93 E-value=4.2e-09 Score=73.69 Aligned_cols=70 Identities=19% Similarity=0.125 Sum_probs=53.3
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC-----------------------------------
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE----------------------------------- 71 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~----------------------------------- 71 (110)
....+.+...++.... ..++..+||++||+|.+++.++.....
T Consensus 177 Apl~e~lAa~ll~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 254 (385)
T 3ldu_A 177 APIRETLAAGLIYLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDN 254 (385)
T ss_dssp CCCCHHHHHHHHHTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCC
T ss_pred CCCcHHHHHHHHHhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhc
Confidence 3344555555555443 456789999999999999999887421
Q ss_pred --CcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 72 --HGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 72 --~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+.+|+|+|+|+.+++.|++++..+++.
T Consensus 255 ~~~~~V~GvDid~~ai~~Ar~Na~~~gl~ 283 (385)
T 3ldu_A 255 ESKFKIYGYDIDEESIDIARENAEIAGVD 283 (385)
T ss_dssp SCCCCEEEEESCHHHHHHHHHHHHHHTCG
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCC
Confidence 146999999999999999999988764
No 175
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.92 E-value=6.6e-09 Score=71.37 Aligned_cols=49 Identities=12% Similarity=0.099 Sum_probs=43.8
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|.+++.+++. +. +|+++|+|+.+++.+++++..+++
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga--~V~~VD~s~~al~~a~~n~~~~gl 200 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GA--EVTHVDASKKAIGWAKENQVLAGL 200 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TC--EEEEECSCHHHHHHHHHHHHHHTC
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CC--EEEEEECCHHHHHHHHHHHHHcCC
Confidence 45679999999999999999997 34 799999999999999999988764
No 176
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.92 E-value=1.2e-09 Score=70.08 Aligned_cols=48 Identities=17% Similarity=0.284 Sum_probs=41.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
..++.+|||+|||+|..+..+++.. . +|+|+|+|+.+++.++++....
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~~~~~ 96 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC-K--RLTVIDVMPRAIGRACQRTKRW 96 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE-E--EEEEEESCHHHHHHHHHHTTTC
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHhcccC
Confidence 3456799999999999999999985 3 6999999999999999987653
No 177
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.92 E-value=1.2e-09 Score=75.12 Aligned_cols=61 Identities=21% Similarity=0.195 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 34 HAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 34 ~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
...+++.+. ..++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.+++++..++.
T Consensus 185 ~~~ll~~l~--~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~ 245 (343)
T 2pjd_A 185 SQLLLSTLT--PHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGV 245 (343)
T ss_dssp HHHHHHHSC--TTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhcC--cCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCC
Confidence 344444442 2356799999999999999999984 556899999999999999999987654
No 178
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.92 E-value=3.5e-09 Score=70.49 Aligned_cols=54 Identities=28% Similarity=0.455 Sum_probs=44.2
Q ss_pred HHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 34 HAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 34 ~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
...+++.+. ..++.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.++++.
T Consensus 46 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~ 99 (279)
T 3ccf_A 46 GEDLLQLLN--PQPGEFILDLGCGTGQLTEKIAQS---GAEVLGTDNAATMIEKARQNY 99 (279)
T ss_dssp CCHHHHHHC--CCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHhC--CCCCCEEEEecCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHhhC
Confidence 344555554 567789999999999999999984 247999999999999998875
No 179
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.91 E-value=2.3e-09 Score=70.29 Aligned_cols=46 Identities=24% Similarity=0.313 Sum_probs=40.8
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
..++.+|||+|||+|..+..+++.+ +..+|+++|+|+.+++.++++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~ 76 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR 76 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh
Confidence 4567899999999999999999986 345799999999999999887
No 180
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.91 E-value=1.6e-09 Score=70.41 Aligned_cols=46 Identities=26% Similarity=0.204 Sum_probs=39.8
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
+..+|||+|||+|..+..+++. ..+|+|+|+|+.+++.++++....
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~ 111 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSS 111 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTS
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhcc
Confidence 4569999999999999999875 246999999999999999988763
No 181
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.90 E-value=3.7e-09 Score=69.35 Aligned_cols=59 Identities=10% Similarity=0.175 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHH---hhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 31 PHMHAHALELLR---EHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 31 ~~~~~~~~~~l~---~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
......+++.+. ..+.++.+|||+|||+|..+..+++.. .+|+|+|+|+.+++.+++++
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~ 81 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG---YRYIALDADAAMLEVFRQKI 81 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT---CEEEEEESCHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHHh
Confidence 344455555552 134677899999999999999999873 36999999999999999886
No 182
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.90 E-value=1.2e-08 Score=64.91 Aligned_cols=62 Identities=16% Similarity=0.127 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.....++..+. ...++.+|||+|||+|..+..++...+ .+|+|+|+|+.+++.+++++...+
T Consensus 9 ~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~ 70 (209)
T 2p8j_A 9 PQLYRFLKYCN-ESNLDKTVLDCGAGGDLPPLSIFVEDG--YKTYGIEISDLQLKKAENFSRENN 70 (209)
T ss_dssp THHHHHHHHHH-HSSSCSEEEEESCCSSSCTHHHHHHTT--CEEEEEECCHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHh-ccCCCCEEEEECCCCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcC
Confidence 33444455443 256778999999999998555544423 479999999999999999887643
No 183
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.90 E-value=1.7e-09 Score=70.26 Aligned_cols=53 Identities=15% Similarity=0.211 Sum_probs=43.4
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALL 100 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 100 (110)
.++.+|||+|||+|..+..+++.. . .+|+++|+|+.+++.++++....++..+
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~ 94 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHG-A-SYVLGLDLSEKMLARARAAGPDTGITYE 94 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-C-SEEEEEESCHHHHHHHHHTSCSSSEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCC-C-CeEEEEcCCHHHHHHHHHhcccCCceEE
Confidence 467899999999999999999883 3 3799999999999999988755444333
No 184
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.90 E-value=1.3e-08 Score=71.29 Aligned_cols=72 Identities=19% Similarity=0.094 Sum_probs=54.8
Q ss_pred cceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC---------------------------------
Q psy5585 25 KVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE--------------------------------- 71 (110)
Q Consensus 25 ~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~--------------------------------- 71 (110)
+.....+.+...++.... ..++..++|++||+|.+++.++.....
T Consensus 174 ~~Apl~e~LAaall~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~ 251 (384)
T 3ldg_A 174 GGAPIKENMAAAIILLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQA 251 (384)
T ss_dssp --CCCCHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhh
Confidence 344445666666665554 457789999999999999998876421
Q ss_pred ----CcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 72 ----HGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 72 ----~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+.+|+|+|+|+.+++.|++|+..+++.
T Consensus 252 ~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~ 282 (384)
T 3ldg_A 252 DYDIQLDISGFDFDGRMVEIARKNAREVGLE 282 (384)
T ss_dssp CTTCCCCEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred hccCCceEEEEECCHHHHHHHHHHHHHcCCC
Confidence 146999999999999999999988764
No 185
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.90 E-value=6e-09 Score=72.82 Aligned_cols=51 Identities=18% Similarity=0.127 Sum_probs=45.0
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++.+|||+|||+|.+++.+++.. . .+|+++|+|+.+++.|++++..++++
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a-~~V~~vD~s~~al~~A~~N~~~n~~~ 261 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-A-MATTSVDLAKRSRALSLAHFEANHLD 261 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-B-SEEEEEESCTTHHHHHHHHHHHTTCC
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-C-CEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 567899999999999999999863 3 37999999999999999999988753
No 186
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.89 E-value=4.8e-09 Score=67.19 Aligned_cols=51 Identities=31% Similarity=0.430 Sum_probs=42.3
Q ss_pred HHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 36 HALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 36 ~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
.++..+. ..++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++
T Consensus 43 ~~~~~~~--~~~~~~vLdiG~G~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~ 93 (227)
T 3e8s_A 43 AILLAIL--GRQPERVLDLGCGEGWLLRALADR-GI--EAVGVDGDRTLVDAARAA 93 (227)
T ss_dssp HHHHHHH--HTCCSEEEEETCTTCHHHHHHHTT-TC--EEEEEESCHHHHHHHHHT
T ss_pred HHHHHhh--cCCCCEEEEeCCCCCHHHHHHHHC-CC--EEEEEcCCHHHHHHHHHh
Confidence 3444444 446689999999999999999998 33 699999999999999877
No 187
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.89 E-value=5.5e-09 Score=66.25 Aligned_cols=48 Identities=15% Similarity=0.250 Sum_probs=41.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++ +|||+|||+|..+..+++. +. +|+++|+|+.+++.++++....+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~-~~--~v~~vD~s~~~~~~a~~~~~~~~ 75 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL-GY--EVTAVDQSSVGLAKAKQLAQEKG 75 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT-TC--EEEEECSSHHHHHHHHHHHHHHT
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC-CC--eEEEEECCHHHHHHHHHHHHhcC
Confidence 4566 9999999999999999987 33 69999999999999999987653
No 188
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.88 E-value=2e-09 Score=70.56 Aligned_cols=45 Identities=29% Similarity=0.395 Sum_probs=38.5
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
++.+|||+|||+|.++..+++. +. .+|+|+|+|+.|++.++++..
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~-g~-~~V~gvDis~~ml~~a~~~~~ 81 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN-GA-KLVYALDVGTNQLAWKIRSDE 81 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TC-SEEEEECSSCCCCCHHHHTCT
T ss_pred CCCEEEEEccCCCHHHHHHHhc-CC-CEEEEEcCCHHHHHHHHHhCc
Confidence 4569999999999999999998 43 379999999999999877543
No 189
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.88 E-value=2.4e-09 Score=66.19 Aligned_cols=50 Identities=16% Similarity=0.122 Sum_probs=42.9
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+++.+. +.++.+|||+|||+|..+..+++.. . +++++|+++.+++.++++
T Consensus 9 ~~~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~-~--~v~~vD~s~~~~~~a~~~ 58 (170)
T 3i9f_A 9 YLPNIF--EGKKGVIVDYGCGNGFYCKYLLEFA-T--KLYCIDINVIALKEVKEK 58 (170)
T ss_dssp THHHHH--SSCCEEEEEETCTTCTTHHHHHTTE-E--EEEEECSCHHHHHHHHHH
T ss_pred HHHhcC--cCCCCeEEEECCCCCHHHHHHHhhc-C--eEEEEeCCHHHHHHHHHh
Confidence 344454 6677899999999999999999986 3 699999999999999987
No 190
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.88 E-value=3.3e-09 Score=71.01 Aligned_cols=45 Identities=16% Similarity=0.141 Sum_probs=35.6
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
++.+|||+|||+|.....++... ..+|+|+|+|+.|++.+++++.
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~~--~~~v~gvD~s~~~l~~a~~~~~ 115 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACSH--FEDITMTDFLEVNRQELGRWLQ 115 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGGG--CSEEEEECSCHHHHHHHHHHHT
T ss_pred CCCeEEEECCCcChHHHHhhccC--CCeEEEeCCCHHHHHHHHHHHh
Confidence 66899999999999554444432 2379999999999999988654
No 191
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.88 E-value=6.9e-09 Score=74.47 Aligned_cols=49 Identities=27% Similarity=0.313 Sum_probs=42.3
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|.+++.+++. + ..+|+|+|+|+ +++.|++++..+++
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl 205 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNL 205 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTC
T ss_pred cCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCC
Confidence 46789999999999999999886 3 35899999998 99999999887764
No 192
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.88 E-value=1.1e-08 Score=72.80 Aligned_cols=54 Identities=20% Similarity=0.193 Sum_probs=47.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|..+..++...+..++|+++|+++.+++.+++++...++.
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~ 310 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK 310 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC
Confidence 567789999999999999999998754478999999999999999999877653
No 193
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.87 E-value=2.3e-09 Score=71.30 Aligned_cols=50 Identities=16% Similarity=0.162 Sum_probs=42.3
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCH-------HHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIP-------DLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~-------~~~~~a~~~~~~~~~ 97 (110)
..++.+|||+|||+|..++.+++.. ++|+++|+|+ .+++.++++...+++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g---~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~ 137 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLG---LTVTAFEQHPAVACLLSDGIRRALLNPETQDT 137 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTT---CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhC---CEEEEEECChhhhHHHHHHHHHHHhHHHhhCC
Confidence 4456799999999999999999974 2599999999 999999888766543
No 194
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.86 E-value=1.1e-08 Score=71.83 Aligned_cols=72 Identities=18% Similarity=0.098 Sum_probs=55.3
Q ss_pred cceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC---------------------------------
Q psy5585 25 KVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE--------------------------------- 71 (110)
Q Consensus 25 ~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~--------------------------------- 71 (110)
+.....+.+...++.... ..++..+||++||+|.+++.++.....
T Consensus 181 ~~Apl~e~lAa~ll~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~ 258 (393)
T 3k0b_A 181 GSAPIKETMAAALVLLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLA 258 (393)
T ss_dssp CSCSCCHHHHHHHHHHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHC
T ss_pred CCCCCcHHHHHHHHHHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhh
Confidence 344445666666665544 456789999999999999998887421
Q ss_pred ----CcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 72 ----HGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 72 ----~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+.+|+|+|+|+.+++.|++|+..+++.
T Consensus 259 ~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~ 289 (393)
T 3k0b_A 259 NYDQPLNIIGGDIDARLIEIAKQNAVEAGLG 289 (393)
T ss_dssp CTTCCCCEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred cccCCceEEEEECCHHHHHHHHHHHHHcCCC
Confidence 146999999999999999999987754
No 195
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.86 E-value=3.2e-09 Score=69.22 Aligned_cols=47 Identities=21% Similarity=0.286 Sum_probs=41.7
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++...
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~ 125 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEE 125 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhc
Confidence 47899999999999999998875 247999999999999999998765
No 196
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.86 E-value=2.4e-09 Score=71.41 Aligned_cols=53 Identities=13% Similarity=0.032 Sum_probs=47.3
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+....+|||||||+|-+++.++... ++.+|+++|+++.+++.+++++..+++.
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~-p~a~y~a~DId~~~le~a~~~l~~~g~~ 182 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLP-AETVYIASDIDARLVGFVDEALTRLNVP 182 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCC-TTCEEEEEESBHHHHHHHHHHHHHTTCC
T ss_pred cCCCceeeeeccCccHHHHHHHhhC-CCCEEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 4557799999999999999999984 6689999999999999999999887764
No 197
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.86 E-value=1.8e-08 Score=68.31 Aligned_cols=48 Identities=15% Similarity=0.127 Sum_probs=41.9
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~ 141 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHG-TVEHCDLVDIDGEVMEQSKQHFPQ 141 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHhHH
Confidence 466899999999999999999873 446899999999999999998753
No 198
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.86 E-value=1.1e-08 Score=68.21 Aligned_cols=50 Identities=20% Similarity=0.212 Sum_probs=43.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+.++.+|||+|||+|..+..+++.. .++|+|+|+|+.+++.++++....+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~ 111 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG--IGEYYGVDIAEVSINDARVRARNMK 111 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT--CSEEEEEESCHHHHHHHHHHHHTSC
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHhcC
Confidence 5688899999999999999988873 2479999999999999999987653
No 199
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.85 E-value=1.7e-08 Score=68.72 Aligned_cols=48 Identities=27% Similarity=0.250 Sum_probs=42.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++..
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~ 123 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPE 123 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHh
Confidence 456899999999999999999874 346899999999999999998764
No 200
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.85 E-value=1.3e-08 Score=69.93 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=53.4
Q ss_pred ccceecChhhHHHHHHHHHhh--cCCCCeEEEecCCcChhHHHHHHHhCCC----cEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 24 YKVTISAPHMHAHALELLREH--LENGKRALDVGSGSGYLTTCMALMMGEH----GKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~--~~~~~~vldiGcG~G~~~~~l~~~~~~~----~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+...++..+...+...+... ..++.+|||+|||+|.++..+++..... .+++|+|+++.+++.|+.+....+
T Consensus 105 ~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g 183 (344)
T 2f8l_A 105 VNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR 183 (344)
T ss_dssp GGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT
T ss_pred cCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC
Confidence 344555555555444444221 2355799999999999999999986422 579999999999999999987664
No 201
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.85 E-value=6.4e-09 Score=67.94 Aligned_cols=47 Identities=17% Similarity=0.332 Sum_probs=41.4
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.++.+|||+|||+|..+..+++.. ..+|+++|+|+.+++.+++++..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~ 138 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAG 138 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTT
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhcc
Confidence 467899999999999999999985 24799999999999999988754
No 202
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.85 E-value=1.7e-08 Score=66.76 Aligned_cols=56 Identities=27% Similarity=0.442 Sum_probs=44.6
Q ss_pred HHHHHHHhhc-CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 36 HALELLREHL-ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 36 ~~~~~l~~~~-~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
.+.+.+...+ .++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.++++.
T Consensus 73 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~ 129 (269)
T 1p91_A 73 AIVAQLRERLDDKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY 129 (269)
T ss_dssp HHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC
Confidence 3444444333 467899999999999999999985 3357999999999999998875
No 203
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.85 E-value=1.2e-10 Score=76.64 Aligned_cols=62 Identities=21% Similarity=0.352 Sum_probs=51.1
Q ss_pred eecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 27 TISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 27 ~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
...+......+++.+. +.++.+|||+|||+|.++..+++.. ++|+|+|+|+.+++.+++++.
T Consensus 11 fl~~~~~~~~i~~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~ 72 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLN--LKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK 72 (245)
T ss_dssp BCCCTTTHHHHHHHCC--CCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT
T ss_pred CCCCHHHHHHHHHhcC--CCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc
Confidence 3455667777777765 5677899999999999999999984 369999999999999887764
No 204
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.85 E-value=1.7e-08 Score=69.43 Aligned_cols=48 Identities=19% Similarity=0.104 Sum_probs=42.5
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|++++..
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~ 166 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPD 166 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHh
Confidence 456799999999999999999874 446899999999999999998865
No 205
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.84 E-value=1.7e-09 Score=71.76 Aligned_cols=47 Identities=19% Similarity=0.087 Sum_probs=38.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.++.+|||+|||+|..+..++... . .+|+|+|+|+.|++.++++++.
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~-~-~~v~g~D~s~~~l~~a~~~~~~ 100 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS-F-QDITLSDFTDRNREELEKWLKK 100 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHHT
T ss_pred CCCceEEEeCCCccHHHHHHHHhh-h-cceeeccccHHHHHHHHHHHhc
Confidence 466799999999998777666552 2 3699999999999999987654
No 206
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.84 E-value=1.7e-08 Score=69.00 Aligned_cols=48 Identities=15% Similarity=0.092 Sum_probs=42.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++..
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~ 162 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKN 162 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTT
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHh
Confidence 456799999999999999999874 346899999999999999998765
No 207
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.84 E-value=9.5e-09 Score=65.17 Aligned_cols=44 Identities=30% Similarity=0.408 Sum_probs=38.8
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
.+.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~-~~--~v~gvD~s~~~~~~a~~~~~ 84 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL-GH--QIEGLEPATRLVELARQTHP 84 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT-TC--CEEEECCCHHHHHHHHHHCT
T ss_pred CCCeEEEecCCCCHHHHHHHhc-CC--eEEEEeCCHHHHHHHHHhCC
Confidence 3789999999999999999998 33 59999999999999998743
No 208
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.83 E-value=2.2e-08 Score=63.83 Aligned_cols=50 Identities=22% Similarity=0.403 Sum_probs=39.8
Q ss_pred HHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 38 LELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 38 ~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
...+.....++.+|||+|||+|..+..+ +. .+++++|+|+.+++.++++.
T Consensus 27 ~~~l~~~~~~~~~vLdiG~G~G~~~~~l----~~-~~v~~vD~s~~~~~~a~~~~ 76 (211)
T 2gs9_A 27 ERALKGLLPPGESLLEVGAGTGYWLRRL----PY-PQKVGVEPSEAMLAVGRRRA 76 (211)
T ss_dssp HHHHHTTCCCCSEEEEETCTTCHHHHHC----CC-SEEEEECCCHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCeEEEECCCCCHhHHhC----CC-CeEEEEeCCHHHHHHHHHhC
Confidence 3444444557789999999999988877 11 26999999999999999886
No 209
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.83 E-value=5.8e-09 Score=67.97 Aligned_cols=44 Identities=23% Similarity=0.422 Sum_probs=38.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.++++
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~-~~--~v~gvD~s~~~~~~a~~~ 82 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE-GI--ESIGVDINEDMIKFCEGK 82 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH-TC--CEEEECSCHHHHHHHHTT
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC-CC--cEEEEECCHHHHHHHHhh
Confidence 457789999999999999999998 34 599999999999999876
No 210
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.82 E-value=1.2e-08 Score=63.76 Aligned_cols=46 Identities=24% Similarity=0.458 Sum_probs=41.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
+.++.+|||+|||+|..+..+++. +. +++++|+++.+++.++++..
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~-~~--~v~~~D~~~~~~~~a~~~~~ 89 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ-GH--DVLGTDLDPILIDYAKQDFP 89 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHCT
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC-CC--cEEEEcCCHHHHHHHHHhCC
Confidence 567889999999999999999988 33 69999999999999998864
No 211
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.82 E-value=1.7e-08 Score=66.60 Aligned_cols=49 Identities=18% Similarity=0.138 Sum_probs=42.3
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.+..+|||+|||+|-+++.++ +..+++++|+|+.+++.++++...++..
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~ 152 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWD 152 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCC
Confidence 457799999999999999988 3357999999999999999998776643
No 212
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.82 E-value=2.5e-08 Score=66.78 Aligned_cols=48 Identities=23% Similarity=0.163 Sum_probs=41.9
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++..
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~ 121 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPS 121 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHh
Confidence 356799999999999999999874 346899999999999999998854
No 213
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.81 E-value=2.9e-08 Score=67.14 Aligned_cols=48 Identities=19% Similarity=0.142 Sum_probs=42.1
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++..
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~ 136 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQ 136 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHh
Confidence 456799999999999999999874 346899999999999999998864
No 214
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.81 E-value=7.8e-09 Score=72.86 Aligned_cols=47 Identities=13% Similarity=0.199 Sum_probs=42.3
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.++.+|||+|||+|..++.+++.. . +|+++|+|+.+++.+++|+..+
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~g-~--~V~~VD~s~~~l~~Ar~N~~~~ 138 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSKA-S--QGIYIERNDETAVAARHNIPLL 138 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTTC-S--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHhcC-C--EEEEEECCHHHHHHHHHhHHHh
Confidence 347899999999999999999874 3 6999999999999999999876
No 215
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.80 E-value=2.4e-08 Score=69.85 Aligned_cols=52 Identities=25% Similarity=0.422 Sum_probs=45.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
..++.+|||+|||+|.+++.+++. +. ++|+++|+|+.+++.+++++..++++
T Consensus 215 ~~~~~~VLDl~~G~G~~~~~la~~-g~-~~v~~vD~s~~~l~~a~~n~~~n~~~ 266 (396)
T 2as0_A 215 VQPGDRVLDVFTYTGGFAIHAAIA-GA-DEVIGIDKSPRAIETAKENAKLNGVE 266 (396)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHTTCG
T ss_pred hhCCCeEEEecCCCCHHHHHHHHC-CC-CEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 347789999999999999999987 32 47999999999999999999987653
No 216
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.80 E-value=2.9e-08 Score=66.70 Aligned_cols=49 Identities=14% Similarity=0.078 Sum_probs=42.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+++.+++.|++++...
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~a~~~~~~~ 125 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNI 125 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTT
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHHh
Confidence 456799999999999999999873 4468999999999999999987653
No 217
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.80 E-value=5e-08 Score=67.79 Aligned_cols=49 Identities=14% Similarity=0.108 Sum_probs=43.7
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
++.+|||+| |+|.++..++.. ++.++|+++|+|+.+++.|++++..+++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~ 220 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGY 220 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 578999999 999999999988 4556899999999999999999988764
No 218
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.80 E-value=1.5e-08 Score=70.92 Aligned_cols=50 Identities=20% Similarity=0.200 Sum_probs=44.7
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.++.+|||+|||+|.+++.+++.. ..+|+++|+|+.+++.+++++..+++
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl 268 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKL 268 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 577899999999999999999973 24799999999999999999988765
No 219
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.79 E-value=1.3e-08 Score=64.88 Aligned_cols=52 Identities=23% Similarity=0.405 Sum_probs=42.1
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
..++..+. ...++.+|||+|||+|..+..+++. +. +|+|+|+|+.+++.+++
T Consensus 35 ~~~~~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~-~~--~v~~~D~s~~~~~~a~~ 86 (218)
T 3ou2_A 35 PAALERLR-AGNIRGDVLELASGTGYWTRHLSGL-AD--RVTALDGSAEMIAEAGR 86 (218)
T ss_dssp HHHHHHHT-TTTSCSEEEEESCTTSHHHHHHHHH-SS--EEEEEESCHHHHHHHGG
T ss_pred HHHHHHHh-cCCCCCeEEEECCCCCHHHHHHHhc-CC--eEEEEeCCHHHHHHHHh
Confidence 34444443 2456679999999999999999998 33 69999999999999987
No 220
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.78 E-value=2.5e-08 Score=68.67 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=44.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..+..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++++...+.
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~ 238 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGV 238 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCC
Confidence 4567899999999999999999996 5568999999 9999999999877653
No 221
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.78 E-value=5.3e-09 Score=68.69 Aligned_cols=48 Identities=19% Similarity=0.103 Sum_probs=41.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.++.+|||+|||+|..+..+++.. . .+|+|+|+|+.+++.+++++...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~l~~a~~~~~~~ 102 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACES-F-TEIIVSDYTDQNLWELQKWLKKE 102 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGT-E-EEEEEEESCHHHHHHHHHHHTTC
T ss_pred cCCCEEEEECCCccHHHHHHhhcc-c-CeEEEecCCHHHHHHHHHHHhcC
Confidence 456799999999999999988874 3 47999999999999999887654
No 222
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.78 E-value=4.6e-08 Score=66.49 Aligned_cols=49 Identities=14% Similarity=0.255 Sum_probs=43.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+..+|||+|||+|..+..+++.. +..+++++|++ .+++.+++++...+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~ 212 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQG 212 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcC
Confidence 567899999999999999999996 55689999999 99999999987654
No 223
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.77 E-value=4.1e-08 Score=66.97 Aligned_cols=49 Identities=16% Similarity=0.105 Sum_probs=42.8
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++...
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~ 155 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGM 155 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTT
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHh
Confidence 456799999999999999999874 4468999999999999999988653
No 224
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.77 E-value=4.2e-08 Score=65.83 Aligned_cols=46 Identities=17% Similarity=0.180 Sum_probs=41.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
..++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|++++
T Consensus 73 ~~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~ 118 (281)
T 1mjf_A 73 HPKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI 118 (281)
T ss_dssp SSCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH
Confidence 346689999999999999999998 4 368999999999999999987
No 225
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.77 E-value=4.6e-08 Score=66.43 Aligned_cols=48 Identities=19% Similarity=0.180 Sum_probs=42.4
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+..+|||+|||+|..+..+++.. +..+|+++|+|+.+++.|++++..
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~ 141 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHP-SVESVVQCEIDEDVIQVSKKFLPG 141 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHH
T ss_pred CCCCEEEEECCCchHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHhHH
Confidence 456799999999999999999874 446899999999999999998865
No 226
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.76 E-value=3.9e-09 Score=73.90 Aligned_cols=64 Identities=16% Similarity=0.234 Sum_probs=49.1
Q ss_pred cccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 23 GYKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
..+...+...+...+++.+. ..++.+|||+|||+|.++..++++.+...+++|+|+++.+++.|
T Consensus 17 ~~g~~~TP~~l~~~~~~~~~--~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a 80 (421)
T 2ih2_A 17 SLGRVETPPEVVDFMVSLAE--APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP 80 (421)
T ss_dssp ----CCCCHHHHHHHHHHCC--CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC
T ss_pred cCceEeCCHHHHHHHHHhhc--cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC
Confidence 34556667777777777664 34567999999999999999999864446899999999998777
No 227
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.75 E-value=3.8e-08 Score=67.30 Aligned_cols=45 Identities=13% Similarity=0.163 Sum_probs=40.2
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+|||||||+|.++..+++.. +..+|++||+++.+++.|++++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~ 135 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDI 135 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCC
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccc
Confidence 499999999999999999975 446899999999999999998754
No 228
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.75 E-value=3.1e-08 Score=70.00 Aligned_cols=66 Identities=17% Similarity=0.182 Sum_probs=52.9
Q ss_pred cChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 29 SAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 29 ~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.+......+...+. ..++.+|||+|||+|..+..++... ++++|+++|+++.+++.+++++...++
T Consensus 230 ~qd~~s~~~~~~l~--~~~g~~VLDlgaG~G~~t~~la~~~-~~~~v~a~D~~~~~l~~~~~~~~~~g~ 295 (429)
T 1sqg_A 230 VQDASAQGCMTWLA--PQNGEHILDLCAAPGGKTTHILEVA-PEAQVVAVDIDEQRLSRVYDNLKRLGM 295 (429)
T ss_dssp ECCHHHHTHHHHHC--CCTTCEEEEESCTTCHHHHHHHHHC-TTCEEEEEESSTTTHHHHHHHHHHTTC
T ss_pred eeCHHHHHHHHHcC--CCCcCeEEEECCCchHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHHHHHcCC
Confidence 34444444445554 5678899999999999999999996 447899999999999999999987664
No 229
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.75 E-value=1.2e-08 Score=71.18 Aligned_cols=49 Identities=27% Similarity=0.265 Sum_probs=44.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
++.+|||+|||+|.+++.+++. . .+|+++|+|+.+++.+++++..+++.
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~--~~v~~vD~s~~~~~~a~~n~~~n~~~ 257 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-F--REVVAVDSSAEALRRAEENARLNGLG 257 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-E--EEEEEEESCHHHHHHHHHHHHHTTCT
T ss_pred CCCeEEEeeeccCHHHHHHHHh-C--CEEEEEECCHHHHHHHHHHHHHcCCC
Confidence 6779999999999999999998 2 36999999999999999999988754
No 230
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.75 E-value=1.6e-08 Score=67.85 Aligned_cols=48 Identities=13% Similarity=0.106 Sum_probs=36.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHh---CCCcEE--EEEeCCHHHHHHHHHHHHh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMM---GEHGKA--VGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~---~~~~~v--~~vD~s~~~~~~a~~~~~~ 94 (110)
++.+|||||||+|.++..++... .+..+| +++|+|+.|++.+++++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~ 104 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAK 104 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHh
Confidence 45699999999998766443321 133444 9999999999999998764
No 231
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.74 E-value=4.5e-08 Score=67.56 Aligned_cols=49 Identities=18% Similarity=0.297 Sum_probs=43.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++++...+
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~ 229 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAG 229 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcC
Confidence 467899999999999999999996 5568999999 999999999987754
No 232
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.73 E-value=8.3e-08 Score=64.19 Aligned_cols=45 Identities=18% Similarity=0.155 Sum_probs=38.7
Q ss_pred CCeEEEecCCc---ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 48 GKRALDVGSGS---GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 48 ~~~vldiGcG~---G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
..+|||||||+ |..+..+.+.. +..+|+++|+|+.|++.+++++.
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~-p~~~v~~vD~sp~~l~~Ar~~~~ 125 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVN-PDARVVYVDIDPMVLTHGRALLA 125 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCCChHHHHHHHhC-CCCEEEEEECChHHHHHHHHhcC
Confidence 47999999999 98877776663 55789999999999999998874
No 233
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.72 E-value=5.4e-08 Score=69.07 Aligned_cols=72 Identities=14% Similarity=0.122 Sum_probs=56.9
Q ss_pred ccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhC------------CCcEEEEEeCCHHHHHHHHHH
Q psy5585 24 YKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMG------------EHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~------------~~~~v~~vD~s~~~~~~a~~~ 91 (110)
.+.+.++..+...+.+.+. ..++.+|+|+|||+|.+++.+++.+. ...+++|+|+++.+++.|+.+
T Consensus 150 ~G~fyTP~~v~~~mv~~l~--~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~n 227 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCIN--PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMN 227 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHC--CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhC--CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHH
Confidence 4456667777777777765 45667999999999999999988641 123599999999999999999
Q ss_pred HHhhcc
Q psy5585 92 VEKSHK 97 (110)
Q Consensus 92 ~~~~~~ 97 (110)
...++.
T Consensus 228 l~l~g~ 233 (445)
T 2okc_A 228 LYLHGI 233 (445)
T ss_dssp HHHTTC
T ss_pred HHHhCC
Confidence 877665
No 234
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.72 E-value=2.1e-08 Score=68.87 Aligned_cols=49 Identities=18% Similarity=0.191 Sum_probs=43.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.++.+|||+|||+|.+++. ++. .++|+++|+|+.+++.+++++..+++
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~~---~~~V~~vD~s~~ai~~a~~n~~~n~l 241 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CKN---AKKIYAIDINPHAIELLKKNIKLNKL 241 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TTT---SSEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred cCCCCEEEEccCccCHHHHh-ccC---CCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 56788999999999999999 773 34799999999999999999998875
No 235
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.72 E-value=4.6e-08 Score=65.62 Aligned_cols=46 Identities=13% Similarity=0.200 Sum_probs=37.5
Q ss_pred CCCeEEEecCCcCh----hHHHHHHHhCC---CcEEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGY----LTTCMALMMGE---HGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G~----~~~~l~~~~~~---~~~v~~vD~s~~~~~~a~~~~ 92 (110)
+..+|||+|||||. +++.+++..+. ..+|+|+|+|+.|++.|++++
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~ 157 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGI 157 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTE
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcC
Confidence 34689999999998 66677776542 248999999999999999875
No 236
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.71 E-value=1.6e-08 Score=70.91 Aligned_cols=43 Identities=7% Similarity=0.184 Sum_probs=38.4
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
.++.+|||+|||+|..+..+++.. . +|+|+|+|+.+++.++++
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~g-~--~v~gvD~s~~~~~~a~~~ 148 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEAG-V--RHLGFEPSSGVAAKAREK 148 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHTT-C--EEEEECCCHHHHHHHHTT
T ss_pred CCCCEEEEecCCCCHHHHHHHHcC-C--cEEEECCCHHHHHHHHHc
Confidence 467899999999999999999873 3 699999999999999866
No 237
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.71 E-value=6.9e-09 Score=70.17 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=36.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+|||+|||||.++..+++. +. ++|+|+|+|+.|+..+.+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-ga-~~V~aVDvs~~mL~~a~r 126 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-GA-KLVYAVDVGTNQLVWKLR 126 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TC-SEEEEECSSSSCSCHHHH
T ss_pred cccEEEecCCCccHHHHHHHhC-CC-CEEEEEECCHHHHHHHHH
Confidence 5679999999999999999988 33 479999999999988544
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.71 E-value=8.2e-08 Score=71.71 Aligned_cols=73 Identities=16% Similarity=0.110 Sum_probs=56.3
Q ss_pred ccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhC---------------------------------
Q psy5585 24 YKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMG--------------------------------- 70 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~--------------------------------- 70 (110)
.+.....+.+...++.... ..++..+||++||+|.+++.++....
T Consensus 169 ~~~apl~e~LAa~ll~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~ 246 (703)
T 3v97_A 169 AGIAPIKETLAAAIVMRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQT 246 (703)
T ss_dssp SCCCSSCHHHHHHHHHHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHH
Confidence 3444455666666666554 45678999999999999998887631
Q ss_pred --------CCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 71 --------EHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 71 --------~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.+.+++|+|+++.+++.|+.|+..+++.
T Consensus 247 ~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~ 282 (703)
T 3v97_A 247 RARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIG 282 (703)
T ss_dssp HHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCG
T ss_pred HhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCC
Confidence 1247999999999999999999998865
No 239
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.70 E-value=8.2e-08 Score=67.03 Aligned_cols=48 Identities=25% Similarity=0.073 Sum_probs=44.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
++.+|||+|||+|..++.+++..+ ..+|+++|+++.+++.+++|++.+
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n 94 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLN 94 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHh
Confidence 678999999999999999999854 357999999999999999999988
No 240
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.69 E-value=1e-07 Score=66.06 Aligned_cols=49 Identities=14% Similarity=0.255 Sum_probs=43.5
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++++...+
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~ 249 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRG 249 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT
T ss_pred ccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcC
Confidence 456899999999999999999995 5678999999 999999999987654
No 241
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.69 E-value=7.5e-08 Score=66.19 Aligned_cols=49 Identities=22% Similarity=0.329 Sum_probs=43.3
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+..+|||+|||+|..+..+++.. ++.+++++|+ +.+++.+++++...+
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~ 230 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEG 230 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTT
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcC
Confidence 466799999999999999999995 5578999999 999999999987764
No 242
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.69 E-value=4.6e-08 Score=73.04 Aligned_cols=51 Identities=20% Similarity=0.184 Sum_probs=45.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++.+|||+|||+|.+++.++.. +. .+|+++|+|+.+++.+++|+..++++
T Consensus 538 ~~g~~VLDlg~GtG~~sl~aa~~-ga-~~V~aVD~s~~al~~a~~N~~~ngl~ 588 (703)
T 3v97_A 538 SKGKDFLNLFSYTGSATVHAGLG-GA-RSTTTVDMSRTYLEWAERNLRLNGLT 588 (703)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHT-TC-SEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCCcEEEeeechhHHHHHHHHC-CC-CEEEEEeCCHHHHHHHHHHHHHcCCC
Confidence 46789999999999999999986 33 47999999999999999999988764
No 243
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.68 E-value=2.1e-08 Score=63.50 Aligned_cols=39 Identities=26% Similarity=0.305 Sum_probs=33.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~ 83 (110)
+.++.+|||+|||+|..+..+++..++ .++|+|+|+|+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~ 59 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM 59 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc
Confidence 457789999999999999999998642 578999999983
No 244
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.68 E-value=7.4e-08 Score=66.62 Aligned_cols=49 Identities=20% Similarity=0.229 Sum_probs=43.0
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
....+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++++...+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~ 226 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLS 226 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCT
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcC
Confidence 456799999999999999999995 5578999999 999999999887654
No 245
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.67 E-value=9.9e-08 Score=64.46 Aligned_cols=48 Identities=19% Similarity=0.250 Sum_probs=42.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
..++..|||++||+|..++++++.. . +++|+|+++.+++.|++++...
T Consensus 233 ~~~~~~vlD~f~GsGt~~~~a~~~g-~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 233 SFVGDVVLDPFAGTGTTLIAAARWG-R--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHTT-C--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC-C--eEEEEeCCHHHHHHHHHHHHHh
Confidence 4578899999999999999998874 4 6999999999999999998764
No 246
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.66 E-value=3.4e-08 Score=62.20 Aligned_cols=39 Identities=26% Similarity=0.416 Sum_probs=34.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCC--------cEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEH--------GKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~--------~~v~~vD~s~~ 83 (110)
+.++.+|||+|||+|..+..+++..+.. ++|+++|+|+.
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~ 66 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHI 66 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhc
Confidence 4678899999999999999999997543 68999999984
No 247
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.63 E-value=8.4e-08 Score=69.76 Aligned_cols=73 Identities=11% Similarity=0.119 Sum_probs=56.5
Q ss_pred ccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC-----------------CcEEEEEeCCHHHHH
Q psy5585 24 YKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE-----------------HGKAVGIDHIPDLVN 86 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~-----------------~~~v~~vD~s~~~~~ 86 (110)
.+.+.++..+...+.+.+. ..++.+|+|++||+|.+++.+++.+.. ..+++|+|+++.++.
T Consensus 148 ~G~fyTP~~iv~~mv~~l~--p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~ 225 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLK--PQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRR 225 (541)
T ss_dssp --CCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhc--cCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHH
Confidence 4556677777777777775 456779999999999999999886531 126999999999999
Q ss_pred HHHHHHHhhccc
Q psy5585 87 SSVKNVEKSHKA 98 (110)
Q Consensus 87 ~a~~~~~~~~~~ 98 (110)
.|+.+...++..
T Consensus 226 lA~~nl~l~gi~ 237 (541)
T 2ar0_A 226 LALMNCLLHDIE 237 (541)
T ss_dssp HHHHHHHTTTCC
T ss_pred HHHHHHHHhCCC
Confidence 999988776653
No 248
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.63 E-value=1.2e-07 Score=64.96 Aligned_cols=47 Identities=13% Similarity=0.159 Sum_probs=42.1
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++++...+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~ 226 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHD 226 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTT
T ss_pred CCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcC
Confidence 7899999999999999999996 5578999999 889999999887754
No 249
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.63 E-value=7e-08 Score=67.70 Aligned_cols=53 Identities=17% Similarity=0.036 Sum_probs=45.9
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
.++.+|||++||+|.+++.+++..+..++|+++|+++.+++.+++|++.++++
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~ 103 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIP 103 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCC
Confidence 35679999999999999999997422257999999999999999999998864
No 250
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.61 E-value=8.8e-08 Score=64.39 Aligned_cols=58 Identities=22% Similarity=0.339 Sum_probs=49.0
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+-+...+++.+. +.++..++|.+||.|..+..+++. +++|+|+|.++.+++.+++ +..
T Consensus 8 pVLl~e~le~L~--~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~ 65 (285)
T 1wg8_A 8 PVLYQEALDLLA--VRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL 65 (285)
T ss_dssp CTTHHHHHHHHT--CCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC
T ss_pred hHHHHHHHHhhC--CCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc
Confidence 345666777776 678889999999999999999997 3579999999999999987 543
No 251
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.60 E-value=1.7e-07 Score=63.81 Aligned_cols=48 Identities=19% Similarity=0.199 Sum_probs=42.6
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++++...+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~ 216 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTG 216 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcC
Confidence 35799999999999999999986 5578999999 999999999887754
No 252
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.59 E-value=6e-08 Score=62.13 Aligned_cols=44 Identities=25% Similarity=0.476 Sum_probs=39.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
.++.+|||+|||+|..+..+++. + .+++++|+|+.+++.++++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~ 74 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL 74 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC
Confidence 46789999999999999999998 4 47999999999999998765
No 253
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.59 E-value=7.6e-08 Score=59.07 Aligned_cols=41 Identities=20% Similarity=0.478 Sum_probs=35.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVN 86 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~ 86 (110)
+.++.+|||+|||+|..+..+++.+++..+++++|+++ +++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~ 60 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP 60 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc
Confidence 45778999999999999999999875556899999998 643
No 254
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.58 E-value=1.5e-07 Score=62.67 Aligned_cols=47 Identities=11% Similarity=0.126 Sum_probs=39.3
Q ss_pred cCCC--CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 45 LENG--KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 45 ~~~~--~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+.++ .+|||++||+|..++.+++.. . +|+++|.++.++..++++++.
T Consensus 84 l~~g~~~~VLDl~~G~G~dal~lA~~g-~--~V~~vE~~~~~~~l~~~~l~~ 132 (258)
T 2oyr_A 84 IKGDYLPDVVDATAGLGRDAFVLASVG-C--RVRMLERNPVVAALLDDGLAR 132 (258)
T ss_dssp CBTTBCCCEEETTCTTCHHHHHHHHHT-C--CEEEEECCHHHHHHHHHHHHH
T ss_pred ccCCCCCEEEEcCCcCCHHHHHHHHcC-C--EEEEEECCHHHHHHHHHHHHH
Confidence 3556 799999999999999999984 3 599999999987777776643
No 255
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.56 E-value=1.1e-07 Score=64.70 Aligned_cols=46 Identities=24% Similarity=0.328 Sum_probs=41.1
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~ 214 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLL 214 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcC
Confidence 899999999999999999996 5578999999 999999999876543
No 256
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.55 E-value=2.9e-07 Score=63.78 Aligned_cols=78 Identities=14% Similarity=0.088 Sum_probs=60.8
Q ss_pred ceecChhhHHHHHHHHHhhcC------CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccc
Q psy5585 26 VTISAPHMHAHALELLREHLE------NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKAL 99 (110)
Q Consensus 26 ~~~~~~~~~~~~~~~l~~~~~------~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 99 (110)
..+..+.+...+++.+. +. ++..|||||.|.|.++..|++...+ .+|+++|+++.++...++.....++..
T Consensus 33 nFL~d~~i~~~Iv~~~~--l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~-~~vvavE~D~~l~~~L~~~~~~~~l~i 109 (353)
T 1i4w_A 33 KYLWNPTVYNKIFDKLD--LTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCP-RQYSLLEKRSSLYKFLNAKFEGSPLQI 109 (353)
T ss_dssp CCBCCHHHHHHHHHHHC--GGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCC-SEEEEECCCHHHHHHHHHHTTTSSCEE
T ss_pred CccCCHHHHHHHHHhcc--CCcccCcCCCCEEEEECCCCCHHHHHHHhhCCC-CEEEEEecCHHHHHHHHHhccCCCEEE
Confidence 46678889999999886 44 3578999999999999999997432 469999999999999888763345556
Q ss_pred cccccee
Q psy5585 100 LDSGRVL 106 (110)
Q Consensus 100 ~~~~~~~ 106 (110)
+..|.++
T Consensus 110 i~~D~l~ 116 (353)
T 1i4w_A 110 LKRDPYD 116 (353)
T ss_dssp ECSCTTC
T ss_pred EECCccc
Confidence 6555543
No 257
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.55 E-value=1.6e-07 Score=59.66 Aligned_cols=36 Identities=22% Similarity=0.380 Sum_probs=31.5
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
+.++.+|||+|||+|..+..+++. .++|+|+|+++.
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~ 58 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEM 58 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCC
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEecccc
Confidence 457889999999999999999988 347999999974
No 258
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.53 E-value=7.1e-08 Score=64.25 Aligned_cols=46 Identities=11% Similarity=-0.067 Sum_probs=40.0
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
....+|||+|||+|.++..+++. + .+|+++|+++.+++.|++++..
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~ 116 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPH 116 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTT
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHh
Confidence 35579999999999999999988 4 5899999999999999887643
No 259
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.52 E-value=3.5e-07 Score=61.40 Aligned_cols=47 Identities=19% Similarity=0.199 Sum_probs=37.6
Q ss_pred CCeEEEecCCc--ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 48 GKRALDVGSGS--GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 48 ~~~vldiGcG~--G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
...|||||||+ +..+..++....+.++|+++|.|+.|+..+++++..
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~ 127 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS 127 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc
Confidence 36899999997 445565655545678999999999999999988765
No 260
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.50 E-value=6e-07 Score=59.55 Aligned_cols=50 Identities=20% Similarity=0.199 Sum_probs=42.6
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
..++..|||+.||+|..+.+..+. +. +++|+|+++.+++.++++++.+++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~-gr--~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL-GR--NFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT-TC--EEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc-CC--eEEEEeCCHHHHHHHHHHHHhccC
Confidence 568889999999999999999887 44 699999999999999999887654
No 261
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.46 E-value=3.6e-07 Score=58.69 Aligned_cols=38 Identities=16% Similarity=0.424 Sum_probs=33.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
++.+|||+|||+|..+..++.. +++|+|+.+++.++++
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~ 84 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR 84 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc
Confidence 4789999999999998876543 9999999999999876
No 262
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.45 E-value=7.4e-07 Score=64.85 Aligned_cols=74 Identities=12% Similarity=-0.052 Sum_probs=59.9
Q ss_pred ccceecChhhHHHHHHHHHhhc--CCCCeEEEecCCcChhHHHHHHHhC--CCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 24 YKVTISAPHMHAHALELLREHL--ENGKRALDVGSGSGYLTTCMALMMG--EHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~--~~~~~vldiGcG~G~~~~~l~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
.|.+.++..+...+.+.+.... .++.+|+|++||+|.+.+.+++.+. ...+++|+|+++.++..|+.+...+++
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi 273 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGV 273 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTC
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCC
Confidence 4567778888888888886321 3567999999999999999998853 135799999999999999999887766
No 263
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.44 E-value=3.5e-07 Score=66.57 Aligned_cols=72 Identities=14% Similarity=0.077 Sum_probs=56.6
Q ss_pred ccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC--------------CcEEEEEeCCHHHHHHHH
Q psy5585 24 YKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE--------------HGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~--------------~~~v~~vD~s~~~~~~a~ 89 (110)
.|.+.++..+...+.+.+. ..+ .+|+|++||+|.+.+.+++.+.. ...++|+|+++.++..|+
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~--p~~-~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~ 300 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLE--PYK-GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAA 300 (544)
T ss_dssp STTTCCCHHHHHHHHHHHC--CCS-EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHh--cCC-CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHH
Confidence 4566777888888888775 333 49999999999999888765420 347999999999999999
Q ss_pred HHHHhhccc
Q psy5585 90 KNVEKSHKA 98 (110)
Q Consensus 90 ~~~~~~~~~ 98 (110)
.+...+++.
T Consensus 301 ~Nl~l~gi~ 309 (544)
T 3khk_A 301 MNMVIRGID 309 (544)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHhCCC
Confidence 998877653
No 264
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.40 E-value=1.9e-07 Score=64.21 Aligned_cols=55 Identities=20% Similarity=0.280 Sum_probs=47.6
Q ss_pred hHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 33 MHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 33 ~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+...+++.+. +.++..++|..||.|..+.++++.++++++|+|+|.++.+++.++
T Consensus 45 Ll~Evl~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 45 LLDEAVNGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp TTHHHHHHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred cHHHHHHhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 4455666665 678899999999999999999999888899999999999999984
No 265
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.39 E-value=7.4e-07 Score=61.89 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=41.1
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+..+||++|||+|.++..++++ ++ .+|++||+++.+++.|++++..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~-~~-~~Vt~VEID~~vie~Ar~~~~~ 233 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRK 233 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC
T ss_pred CCCEEEEEECChhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHH
Confidence 4679999999999999999988 44 6899999999999999999764
No 266
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.36 E-value=9e-07 Score=54.15 Aligned_cols=54 Identities=20% Similarity=0.223 Sum_probs=41.7
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcC-hhHHHHHHHhCCCcEEEEEeCCHHHHH
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSG-YLTTCMALMMGEHGKAVGIDHIPDLVN 86 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G-~~~~~l~~~~~~~~~v~~vD~s~~~~~ 86 (110)
..+...+.+.+.....+..+|||+|||.| ..+..|++..+- .|+++|+++.+++
T Consensus 19 ~~m~e~LaeYI~~~~~~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av~ 73 (153)
T 2k4m_A 19 SHMWNDLAVYIIRCSGPGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHGG 73 (153)
T ss_dssp CHHHHHHHHHHHHHSCSSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSSTT
T ss_pred hhHHHHHHHHHHhcCCCCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCccccc
Confidence 34556667776555556789999999999 699999985343 5999999988766
No 267
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.32 E-value=8.4e-07 Score=67.09 Aligned_cols=71 Identities=11% Similarity=-0.021 Sum_probs=53.5
Q ss_pred cccceecChhhHHHHHHHHHh----hcCCCCeEEEecCCcChhHHHHHHHhC--CCcEEEEEeCCHHHHHHH--HHHHH
Q psy5585 23 GYKVTISAPHMHAHALELLRE----HLENGKRALDVGSGSGYLTTCMALMMG--EHGKAVGIDHIPDLVNSS--VKNVE 93 (110)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~l~~----~~~~~~~vldiGcG~G~~~~~l~~~~~--~~~~v~~vD~s~~~~~~a--~~~~~ 93 (110)
..|.+.+...+...+...... ...++.+|||+|||+|.+++.+++.++ .+.+++|+|+++.++..| +.+..
T Consensus 293 k~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~ 371 (878)
T 3s1s_A 293 HEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLL 371 (878)
T ss_dssp CCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTT
T ss_pred cCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHH
Confidence 346677778888887777221 123567999999999999999998864 135799999999999999 54443
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.30 E-value=4.9e-07 Score=60.28 Aligned_cols=34 Identities=21% Similarity=0.271 Sum_probs=30.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~ 82 (110)
+.++.+|||+|||+|..+..+++. + +|+|+|+++
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gvD~s~ 105 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR-P---HVMDVRAYT 105 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS-T---TEEEEEEEC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc-C---cEEEEECch
Confidence 457789999999999999999887 3 499999998
No 269
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.29 E-value=3.5e-07 Score=64.41 Aligned_cols=40 Identities=23% Similarity=0.238 Sum_probs=33.0
Q ss_pred cCCCCeEEEecCC------cChhHHHHHHHhCCCcEEEEEeCCHHH
Q psy5585 45 LENGKRALDVGSG------SGYLTTCMALMMGEHGKAVGIDHIPDL 84 (110)
Q Consensus 45 ~~~~~~vldiGcG------~G~~~~~l~~~~~~~~~v~~vD~s~~~ 84 (110)
..+..+||||||| +|..++.+++...++++|+|+|+|+.|
T Consensus 214 ~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m 259 (419)
T 3sso_A 214 RNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKS 259 (419)
T ss_dssp TTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCG
T ss_pred cCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHH
Confidence 4567899999999 777777777764467899999999997
No 270
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.28 E-value=3.3e-07 Score=61.47 Aligned_cols=36 Identities=19% Similarity=0.211 Sum_probs=31.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLV 85 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~ 85 (110)
+.++.+|||+|||+|..+..+++. + +|+|+|+++ |+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~-~---~V~gVD~s~-m~ 115 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ-P---NVREVKAYT-LG 115 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS-T---TEEEEEEEC-CC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc-C---CEEEEECch-hh
Confidence 456789999999999999999987 4 499999998 53
No 271
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.23 E-value=2.8e-06 Score=54.62 Aligned_cols=49 Identities=14% Similarity=0.083 Sum_probs=41.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHK 97 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~ 97 (110)
+.+.++|||+|| |+.++.+++. . .++|+++|.+++..+.++++++..++
T Consensus 28 l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~ 76 (202)
T 3cvo_A 28 YEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPP 76 (202)
T ss_dssp HHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCC
T ss_pred hhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 446689999998 5888888885 2 57899999999999999999998764
No 272
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.23 E-value=8e-07 Score=61.04 Aligned_cols=44 Identities=20% Similarity=0.357 Sum_probs=38.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
..+..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~ 229 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG 229 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc
Confidence 4466899999999999999999986 5568999999 999888764
No 273
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.22 E-value=4e-06 Score=60.90 Aligned_cols=73 Identities=11% Similarity=-0.005 Sum_probs=59.0
Q ss_pred ccceecChhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCC------------CcEEEEEeCCHHHHHHHHHH
Q psy5585 24 YKVTISAPHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGE------------HGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~------------~~~v~~vD~s~~~~~~a~~~ 91 (110)
.|.+.++..+...+.+.+. ..++.+|+|.+||+|.+.+...+++.. +..++|+|+++.+...|+-+
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~--p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mN 273 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMD--PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMN 273 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHC--CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhc--cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHH
Confidence 4677888889998988886 567779999999999999888765422 23599999999999999988
Q ss_pred HHhhccc
Q psy5585 92 VEKSHKA 98 (110)
Q Consensus 92 ~~~~~~~ 98 (110)
...++..
T Consensus 274 l~lhg~~ 280 (530)
T 3ufb_A 274 LLLHGLE 280 (530)
T ss_dssp HHHHTCS
T ss_pred HHhcCCc
Confidence 7776643
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.15 E-value=5.7e-06 Score=61.23 Aligned_cols=56 Identities=18% Similarity=0.195 Sum_probs=40.4
Q ss_pred CeEEEecCCcChhHHHHHHH---hCCCcEEEEEeCCHHHHHHHHHHHHhhccccccccceeeec
Q psy5585 49 KRALDVGSGSGYLTTCMALM---MGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLVS 109 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~---~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 109 (110)
..|+|+|||+|-++.+.++. .+.+.+|++||.|+ +...+++..+.++. .+++++++
T Consensus 359 ~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~----~dkVtVI~ 417 (637)
T 4gqb_A 359 QVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEW----GSQVTVVS 417 (637)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTT----GGGEEEEE
T ss_pred cEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccC----CCeEEEEe
Confidence 47999999999885555544 32233799999997 66778888888765 35566654
No 275
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.12 E-value=2.1e-06 Score=59.47 Aligned_cols=43 Identities=21% Similarity=0.383 Sum_probs=36.9
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.+..+|||+|||+|..+..+++.+ +..+++++|+ +.+++.+++
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~ 244 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPA 244 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhh
Confidence 356799999999999999999996 5678999999 888877653
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.09 E-value=9.2e-06 Score=60.69 Aligned_cols=46 Identities=13% Similarity=0.003 Sum_probs=32.6
Q ss_pred CCeEEEecCCcChhHHHHHHHh---C---------CCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMM---G---------EHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~---~---------~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
...|+|+|||+|-++.+.++.. + .+.+|++||.|+.++...+.+..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~ 467 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV 467 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh
Confidence 4589999999999975543332 2 23489999999977765555443
No 277
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.07 E-value=3.3e-06 Score=58.41 Aligned_cols=43 Identities=23% Similarity=0.302 Sum_probs=37.2
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~ 250 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP 250 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh
Confidence 456799999999999999999996 5578999999 899887764
No 278
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.06 E-value=6.7e-06 Score=56.67 Aligned_cols=47 Identities=19% Similarity=0.181 Sum_probs=40.0
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
....+|+|+|||+|..+..+++++ ++.+++..|. +.+++.+++++..
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~ 224 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSF 224 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhh
Confidence 355799999999999999999996 6678888887 7899999877654
No 279
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.04 E-value=3.6e-06 Score=58.27 Aligned_cols=43 Identities=26% Similarity=0.364 Sum_probs=36.8
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~ 242 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ 242 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh
Confidence 356799999999999999999996 5678999999 888877653
No 280
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.03 E-value=5.4e-06 Score=56.85 Aligned_cols=40 Identities=20% Similarity=0.212 Sum_probs=32.9
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVN 86 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~ 86 (110)
..+..+|||+|||+|..+..+++.+ ++.+++++|++ .++.
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~ 221 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDRA-EVVA 221 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEECH-HHHT
T ss_pred ccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecCH-HHhh
Confidence 3466799999999999999999996 56789999994 4444
No 281
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.01 E-value=3.3e-06 Score=57.33 Aligned_cols=32 Identities=13% Similarity=0.225 Sum_probs=28.3
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeC
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDH 80 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~ 80 (110)
+.++.+|||+|||+|..+..+++. +. |+|+|+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~~---V~gvD~ 111 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-KN---VREVKG 111 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-TT---EEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-CC---EEEEec
Confidence 456789999999999999999988 44 999999
No 282
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.00 E-value=4.1e-06 Score=57.65 Aligned_cols=43 Identities=28% Similarity=0.413 Sum_probs=36.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.+++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~ 234 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG 234 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc
Confidence 466799999999999999999996 5578999999 788876653
No 283
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.95 E-value=3.7e-05 Score=54.11 Aligned_cols=49 Identities=10% Similarity=0.147 Sum_probs=42.8
Q ss_pred CCCCeEEEecCCcChhHHHHH-HHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMA-LMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~-~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.++..++|+|++.|..+..++ +..++.++|+++|+++...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 577899999999999999988 5544347899999999999999999987
No 284
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.94 E-value=7.2e-06 Score=52.23 Aligned_cols=40 Identities=18% Similarity=0.129 Sum_probs=30.3
Q ss_pred HHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 37 ALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 37 ~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
+++.+.. ..++.+|||+|||+|..+..++ .+++++|+|+.
T Consensus 58 ~~~~l~~-~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~ 97 (215)
T 2zfu_A 58 IARDLRQ-RPASLVVADFGCGDCRLASSIR------NPVHCFDLASL 97 (215)
T ss_dssp HHHHHHT-SCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS
T ss_pred HHHHHhc-cCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC
Confidence 4444431 3466899999999999888773 25999999987
No 285
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=97.90 E-value=4.4e-05 Score=52.99 Aligned_cols=54 Identities=17% Similarity=0.074 Sum_probs=47.4
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKAL 99 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~ 99 (110)
.+++.+|||+++|.|.=+..++... .++.|+++|+++.-++..++++...+...
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l~A~D~~~~R~~~l~~~l~r~~~~~ 199 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILHSYVPEE 199 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTT-CEEEEEEECSCHHHHHHHHHHHHHHSCTT
T ss_pred CCCCCEEEEecCCccHHHHHHHHhc-CCCcEEEEcCCHHHHHHHHHHHHHhhhhh
Confidence 6788999999999999999999974 56789999999999999999998776543
No 286
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.84 E-value=0.00019 Score=48.54 Aligned_cols=62 Identities=16% Similarity=0.177 Sum_probs=48.7
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccccccccceeee
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSHKALLDSGRVLLV 108 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~ 108 (110)
+..++||-||-|.|..+..+++.. +-.+|+.||+++..++.|++.+...........|++++
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~ 143 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLV 143 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEE
Confidence 466899999999999999999983 44589999999999999999886644333444555543
No 287
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.79 E-value=2.1e-05 Score=53.08 Aligned_cols=37 Identities=19% Similarity=0.184 Sum_probs=29.0
Q ss_pred cCCCCeEEEecCCc------ChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGS------GYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~------G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
+.++.+|||+|||+ |. ..+++..++.++|+|+|+++.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~ 103 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF 103 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC
Confidence 46778999999955 65 555666655679999999998
No 288
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=97.76 E-value=7.5e-05 Score=50.96 Aligned_cols=59 Identities=15% Similarity=0.178 Sum_probs=47.3
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
.+...++... ..++..|||.-||+|..+.+..+. +. +.+|+|+++.+++.+++++...+
T Consensus 240 ~l~~~~i~~~---~~~~~~VlDpF~GsGtt~~aa~~~-gr--~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 240 KLPEFFIRML---TEPDDLVVDIFGGSNTTGLVAERE-SR--KWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HHHHHHHHHH---CCTTCEEEETTCTTCHHHHHHHHT-TC--EEEEEESCHHHHHHHHGGGSCSC
T ss_pred HHHHHHHHHh---CCCCCEEEECCCCCCHHHHHHHHc-CC--CEEEEeCCHHHHHHHHHHHHhcc
Confidence 3444444333 578889999999999999998887 44 69999999999999999887654
No 289
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.66 E-value=0.00019 Score=48.97 Aligned_cols=60 Identities=17% Similarity=0.251 Sum_probs=45.8
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCH---HHHHHHHHHHHhhc
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIP---DLVNSSVKNVEKSH 96 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~---~~~~~a~~~~~~~~ 96 (110)
..+...++... ..++..|||.-||+|..+.+.... +. +.+|+|+++ ..++.+++++...+
T Consensus 229 ~~l~~~~i~~~---~~~~~~vlDpF~GsGtt~~aa~~~-~r--~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 229 AAVIERLVRAL---SHPGSTVLDFFAGSGVTARVAIQE-GR--NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp HHHHHHHHHHH---SCTTCEEEETTCTTCHHHHHHHHH-TC--EEEEEESSTHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHh---CCCCCEEEecCCCCCHHHHHHHHc-CC--cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34444444433 568889999999999999999988 44 599999999 99999999987754
No 290
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.56 E-value=0.00039 Score=46.75 Aligned_cols=52 Identities=10% Similarity=0.001 Sum_probs=40.3
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhC----CCcEEEEEeCCHH--------------------------HHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMG----EHGKAVGIDHIPD--------------------------LVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~----~~~~v~~vD~s~~--------------------------~~~~a~~~~~~~ 95 (110)
...+.|||+|+..|+.++.++.... ++++|+++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 3567999999999999999987653 2568999996431 367788888876
Q ss_pred cc
Q psy5585 96 HK 97 (110)
Q Consensus 96 ~~ 97 (110)
++
T Consensus 185 gl 186 (282)
T 2wk1_A 185 DL 186 (282)
T ss_dssp TC
T ss_pred CC
Confidence 64
No 291
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.52 E-value=0.00019 Score=47.57 Aligned_cols=36 Identities=11% Similarity=0.091 Sum_probs=29.3
Q ss_pred CCCeEEEecCCcChhHHHHHHHh------CCC-----cEEEEEeCCH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMM------GEH-----GKAVGIDHIP 82 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~------~~~-----~~v~~vD~s~ 82 (110)
+..+|||+|+|+|+.++.+++.. .++ .+++++|..+
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p 106 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFP 106 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCc
Confidence 34689999999999999988764 342 5899999887
No 292
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.05 E-value=0.00061 Score=47.51 Aligned_cols=35 Identities=29% Similarity=0.285 Sum_probs=30.8
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~ 82 (110)
+.+++++||+||+.|.-+..++++. ++|++||..+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg---~~V~aVD~~~ 243 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN---MWVYSVDNGP 243 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT---CEEEEECSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC---CEEEEEEhhh
Confidence 5689999999999999999999884 3699999874
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.93 E-value=0.00073 Score=44.55 Aligned_cols=38 Identities=18% Similarity=0.159 Sum_probs=32.3
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
+++++.|+|+||+.|..+..++...+. .+|+|+|+-..
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~-~~V~avdvG~~ 113 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKV-TEVRGYTKGGP 113 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTE-EEEEEECCCST
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCC-CEEEEEecCCC
Confidence 668889999999999999988887555 48999999754
No 294
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.87 E-value=0.00063 Score=46.11 Aligned_cols=38 Identities=24% Similarity=0.218 Sum_probs=32.2
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
+++++.|||+||++|..+..++...+. .+|+|+|+-..
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv-~~V~avdvG~~ 129 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRV-QEVRGYTKGGP 129 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTE-EEEEEECCCST
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCC-CEEEEEEcCCC
Confidence 668889999999999999988877555 47999999865
No 295
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=96.85 E-value=0.00099 Score=44.71 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=31.1
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
+.+..+|||||||.|..+..++...+. ..|+|+|+...
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv-~sV~GvdvG~d 125 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNV-KKVMAFTLGVQ 125 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCC-CeeeeEEeccC
Confidence 567789999999999999988876433 46899999865
No 296
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.84 E-value=0.0026 Score=43.70 Aligned_cols=46 Identities=17% Similarity=0.042 Sum_probs=38.4
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+++|+.||.|.+++.+......-..|+++|+++.+++..+.|+..
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~ 48 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH 48 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc
Confidence 4799999999999999998831112599999999999999998764
No 297
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.81 E-value=0.0037 Score=42.78 Aligned_cols=45 Identities=13% Similarity=0.006 Sum_probs=38.4
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
..+++|+.||.|.+++.+.... - ..++++|+++.+++..+.|+..
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG-~-~~v~~~e~d~~a~~t~~~N~~~ 55 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG-A-ECVYSNEWDKYAQEVYEMNFGE 55 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT-C-EEEEEECCCHHHHHHHHHHHSC
T ss_pred CCcEEEECCCcCHHHHHHHHCC-C-eEEEEEeCCHHHHHHHHHHcCC
Confidence 4689999999999999999874 3 2589999999999999888754
No 298
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.80 E-value=0.0012 Score=44.27 Aligned_cols=38 Identities=21% Similarity=0.198 Sum_probs=30.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
++++.+|||+|||.|..+..++...+. ..++++|+..+
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~-~~v~g~dVGvD 109 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEV-SGVKGFTLGRD 109 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCT
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCC-CcceeEEEecc
Confidence 567789999999999999988876332 46888888744
No 299
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.72 E-value=0.0045 Score=43.30 Aligned_cols=46 Identities=17% Similarity=0.234 Sum_probs=40.5
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+.++||-+|-|.|..+..+++. +. .+|+.||+++..++.|++.+..
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~-~~V~~VEIDp~VVe~ar~yfp~ 250 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KP-KMVTMVEIDQMVIDGCKKYMRK 250 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CC-SEEEEEESCHHHHHHHHHHCCC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CC-ceeEEEccCHHHHHHHHhhchh
Confidence 5679999999999999999987 44 6899999999999999987643
No 300
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.58 E-value=0.0058 Score=42.59 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=37.5
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+++|+.||.|.+++.+.... - ..+.++|+++.+++..+.|+..
T Consensus 3 ~~vidLFsG~GGlslG~~~aG-~-~~v~avE~d~~a~~t~~~N~~~ 46 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG-F-DVKMAVEIDQHAINTHAINFPR 46 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT-C-EEEEEECSCHHHHHHHHHHCTT
T ss_pred CeEEEEccCcCHHHHHHHHCC-C-cEEEEEeCCHHHHHHHHHhCCC
Confidence 579999999999999999884 3 2578999999999998888653
No 301
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.37 E-value=0.0058 Score=41.34 Aligned_cols=39 Identities=23% Similarity=0.144 Sum_probs=31.5
Q ss_pred hcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHH
Q psy5585 44 HLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPD 83 (110)
Q Consensus 44 ~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~ 83 (110)
.+.++.+|||+||+.|..+..+++..+. ..|+|+|+...
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv-~sV~Gvdlg~~ 116 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEV-MSVKGYTLGIE 116 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTE-EEEEEECCCCT
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCC-ceeeeEEeccc
Confidence 3567889999999999999999986433 46889999753
No 302
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.78 E-value=0.021 Score=39.10 Aligned_cols=48 Identities=15% Similarity=0.028 Sum_probs=37.9
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEE-EEEeCCHHHHHHHHHHHHh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKA-VGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v-~~vD~s~~~~~~a~~~~~~ 94 (110)
...+++|+.||.|.++..+....-.-..+ .++|+++.+++.-+.|+..
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~ 57 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE 57 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC
Confidence 34589999999999999998873111146 7999999999998888754
No 303
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=95.77 E-value=0.0012 Score=43.93 Aligned_cols=36 Identities=25% Similarity=0.338 Sum_probs=27.9
Q ss_pred hcCCCCeEEEecCCcChhHHHHHHH--hCC-CcEEEEEe
Q psy5585 44 HLENGKRALDVGSGSGYLTTCMALM--MGE-HGKAVGID 79 (110)
Q Consensus 44 ~~~~~~~vldiGcG~G~~~~~l~~~--~~~-~~~v~~vD 79 (110)
.++++++|+|+||+-|.-+..+++. .+. .+.++++|
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D 108 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGP 108 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCST
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccc
Confidence 3678999999999999999999887 422 34556666
No 304
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=95.72 E-value=0.0017 Score=39.86 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=27.3
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+.++.+|||+|||. +++|+|+.|++.++++...
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~ 42 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN 42 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc
Confidence 56789999999984 2399999999999988643
No 305
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=95.71 E-value=0.027 Score=40.04 Aligned_cols=47 Identities=15% Similarity=0.274 Sum_probs=37.5
Q ss_pred CCeEEEecCCcChhHHHHHHHhCC----CcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGE----HGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~----~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.-.|+|+|.|+|.+..-+++.+.. ..+++.||+|+.+.+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 468999999999988888775421 23799999999988887777654
No 306
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.68 E-value=0.032 Score=37.66 Aligned_cols=46 Identities=11% Similarity=0.057 Sum_probs=37.4
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcE-EEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGK-AVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~-v~~vD~s~~~~~~a~~~~~ 93 (110)
...+++|+-||.|.+++.+... +-+.+ |+++|+++.+++.-+.+..
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~~ 61 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRHQ 61 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHTT
T ss_pred CCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhCC
Confidence 4458999999999999999887 44333 6999999999888777754
No 307
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.59 E-value=0.019 Score=38.81 Aligned_cols=43 Identities=12% Similarity=-0.049 Sum_probs=35.9
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
++|||+-||.|.+++.+.+..-. .+.++|+++.+++.-+.|..
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~--~v~a~e~d~~a~~ty~~N~~ 43 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFR--IICANEYDKSIWKTYESNHS 43 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCE--EEEEEECCTTTHHHHHHHCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCE--EEEEEeCCHHHHHHHHHHCC
Confidence 47999999999999999887322 47899999999988887764
No 308
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.37 E-value=0.042 Score=37.63 Aligned_cols=45 Identities=13% Similarity=0.028 Sum_probs=37.3
Q ss_pred CeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+++|+.||.|.++..+.... -. ..|.++|+++.+++.-+.|+..
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG-~~~~~v~a~e~d~~a~~ty~~N~~~ 49 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESG-LDGEIVAAVDINTVANSVYKHNFPE 49 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHT-CSEEEEEEECCCHHHHHHHHHHCTT
T ss_pred CEEEEECcCccHHHHHHHHcC-CCceEEEEEeCCHHHHHHHHHhCCC
Confidence 379999999999999998873 21 2478999999999998888754
No 309
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=95.24 E-value=0.17 Score=35.51 Aligned_cols=46 Identities=13% Similarity=0.150 Sum_probs=35.6
Q ss_pred CeEEEecCCcChhHHHHHHHhC------CCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGSGYLTTCMALMMG------EHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~------~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
-.|+|+|.|+|.+..-+++.+. ...+++.||+|+.+.+.-++++..
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 4799999999999888877542 234799999999888866655543
No 310
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.16 E-value=0.045 Score=38.01 Aligned_cols=45 Identities=18% Similarity=0.273 Sum_probs=37.5
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||.+|+|. |.++..+++..+. .+|+++|.+++.++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGA-ACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 56788999999987 8889999998754 379999999988887763
No 311
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=94.91 E-value=0.019 Score=40.10 Aligned_cols=41 Identities=22% Similarity=0.050 Sum_probs=28.4
Q ss_pred CCeEEEecCCcChhHHHHHH--------Hh------CCCcEEEEEeCCHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMAL--------MM------GEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~--------~~------~~~~~v~~vD~s~~~~~~a 88 (110)
..+|+|+|||+|..++.+.. .. .+.-+|+..|.-....+..
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~l 107 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTL 107 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHH
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHH
Confidence 46899999999999988733 22 1345778888776554333
No 312
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.80 E-value=0.12 Score=35.32 Aligned_cols=45 Identities=24% Similarity=0.361 Sum_probs=37.0
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||.+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGA-AQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 56788999999986 8888889888654 379999999988887764
No 313
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.75 E-value=0.094 Score=35.95 Aligned_cols=46 Identities=13% Similarity=0.211 Sum_probs=37.9
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+||.+|+|. |..+..+++..+. .+|+++|.+++..+.+++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGA-SIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTC-SEEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHHc
Confidence 56788999999986 8888899988764 2699999999988888643
No 314
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.75 E-value=0.1 Score=35.32 Aligned_cols=44 Identities=20% Similarity=0.250 Sum_probs=37.6
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+|. |..+..+++..+. +|+++|.+++-.+.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGL--RVAAVDIDDAKLNLARR 208 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHH
Confidence 56788999999986 9999999998765 79999999998887764
No 315
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.66 E-value=0.093 Score=36.31 Aligned_cols=45 Identities=18% Similarity=0.271 Sum_probs=37.5
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||.+|+|. |..++.+++..+. .+|+++|.+++-++.+++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga-~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGA-AVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC-CeEEEEcCCHHHHHHHHH
Confidence 56788999999986 8889999998754 369999999998888864
No 316
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=94.56 E-value=0.047 Score=38.22 Aligned_cols=34 Identities=18% Similarity=-0.065 Sum_probs=26.1
Q ss_pred CCeEEEecCCcChhHHHHHHH-------------h---CCCcEEEEEeCC
Q psy5585 48 GKRALDVGSGSGYLTTCMALM-------------M---GEHGKAVGIDHI 81 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~-------------~---~~~~~v~~vD~s 81 (110)
..+|+|+||++|..++.+... . .+.-+|+..|.-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp 102 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLF 102 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCC
Confidence 468999999999999988775 1 133477888877
No 317
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=94.37 E-value=0.062 Score=38.69 Aligned_cols=42 Identities=14% Similarity=0.034 Sum_probs=35.7
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
.+++|+.||.|.++..+.... - ..|+++|+++.+++.-+.|+
T Consensus 89 ~~viDLFaG~GGlslG~~~aG-~-~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIG-G-QCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTT-E-EEEEEECCCHHHHHHHHHHS
T ss_pred ceEEEecCCccHHHHHHHHCC-C-EEEEEEeCCHHHHHHHHHhc
Confidence 489999999999999998873 3 24899999999988888776
No 318
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.17 E-value=0.19 Score=34.14 Aligned_cols=44 Identities=20% Similarity=0.326 Sum_probs=36.7
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. +|+++|.+++-.+.+++
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGA--FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEcCCHHHHHHHHH
Confidence 56888999999985 8888888888765 59999999988888764
No 319
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=94.01 E-value=0.012 Score=39.50 Aligned_cols=55 Identities=15% Similarity=0.088 Sum_probs=43.1
Q ss_pred HHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 35 AHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 35 ~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
...++.+.. + .+..+||+-+|+|.+++.+.+.. .+++.+|.++..++..++|+..
T Consensus 81 ~~yf~~l~~-~-n~~~~LDlfaGSGaLgiEaLS~~---d~~vfvE~~~~a~~~L~~Nl~~ 135 (283)
T 2oo3_A 81 LEYISVIKQ-I-NLNSTLSYYPGSPYFAINQLRSQ---DRLYLCELHPTEYNFLLKLPHF 135 (283)
T ss_dssp HHHHHHHHH-H-SSSSSCCEEECHHHHHHHHSCTT---SEEEEECCSHHHHHHHTTSCCT
T ss_pred HHHHHHHHH-h-cCCCceeEeCCcHHHHHHHcCCC---CeEEEEeCCHHHHHHHHHHhCc
Confidence 345555543 2 45678999999999999999953 3699999999999999888765
No 320
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.96 E-value=0.094 Score=35.63 Aligned_cols=44 Identities=16% Similarity=0.236 Sum_probs=37.3
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. +|+++|.+++-.+.+++
T Consensus 174 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 174 VTKGTKVGVAGFGGLGSMAVKYAVAMGA--EVSVFARNEHKKQDALS 218 (348)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHTTC--EEEEECSSSTTHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCC--eEEEEeCCHHHHHHHHh
Confidence 66888999999986 8888999998765 79999999988887764
No 321
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.91 E-value=0.17 Score=34.49 Aligned_cols=46 Identities=22% Similarity=0.169 Sum_probs=38.6
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+||-+|+|. |..++.+++..+. ..|+++|.+++-.+.+++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGA-CPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHh
Confidence 56888999999986 8889999998765 2499999999998888765
No 322
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.83 E-value=0.12 Score=35.19 Aligned_cols=46 Identities=15% Similarity=0.327 Sum_probs=37.6
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGA-GRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTC-SSEEEECCCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEECCCHHHHHHHHHh
Confidence 56888999999986 8888888888654 3699999999888887654
No 323
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.69 E-value=0.14 Score=35.09 Aligned_cols=45 Identities=16% Similarity=0.330 Sum_probs=36.8
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGA-SRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEECCCHHHHHHHHH
Confidence 56788999999986 8888888988754 369999999988887764
No 324
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.61 E-value=0.2 Score=34.28 Aligned_cols=45 Identities=16% Similarity=0.258 Sum_probs=37.5
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+||-+|+|. |..+..+++..+. +|+++|.+++-++.+++.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGA--EVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEecCchhHHHHHHc
Confidence 45788999999886 8888889988765 799999999888887653
No 325
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.61 E-value=0.27 Score=33.74 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=38.2
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++.
T Consensus 180 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 180 IKAGSTVAILGGGVIGLLTVQLARLAGA-TTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHc
Confidence 67888999999986 8888889988764 3799999999988887753
No 326
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.60 E-value=0.15 Score=35.09 Aligned_cols=44 Identities=23% Similarity=0.255 Sum_probs=36.9
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||.+|+|. |..+..+++..+. +|+++|.+++-.+.+++
T Consensus 192 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga--~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 192 AGPGKKVGVVGIGGLGHMGIKLAHAMGA--HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 56888999999986 8888888888765 69999999988887764
No 327
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.56 E-value=0.14 Score=34.93 Aligned_cols=46 Identities=26% Similarity=0.280 Sum_probs=31.9
Q ss_pred CCCeEEEecCCc-Chh-HHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 47 NGKRALDVGSGS-GYL-TTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~-~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
...+|--||+|+ |.. +..++.. +- .|+.+|++++.++.+.+++...
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a~~-G~--~V~l~D~~~~~l~~~~~~i~~~ 52 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFASG-GF--RVKLYDIEPRQITGALENIRKE 52 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHHT-TC--CEEEECSCHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHHhC-CC--eEEEEECCHHHHHHHHHHHHHH
Confidence 346899999997 543 3334444 33 5999999999988887776543
No 328
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=93.45 E-value=0.12 Score=36.41 Aligned_cols=46 Identities=13% Similarity=0.078 Sum_probs=36.5
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcE----EEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGK----AVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~----v~~vD~s~~~~~~a~~~~~~ 94 (110)
-+|+|+.||.|.....+.+...+-.. |.++|+++.++..-+.+...
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 48999999999999999887421113 78899999999888777654
No 329
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.43 E-value=0.22 Score=34.63 Aligned_cols=46 Identities=15% Similarity=0.190 Sum_probs=37.6
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++.+||-+|+|. |..++.+++..+. .+|+++|.+++-.+.+++.
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGA-SKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHc
Confidence 45778999999986 8888888888654 3799999999888888653
No 330
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.42 E-value=0.24 Score=33.51 Aligned_cols=45 Identities=18% Similarity=0.289 Sum_probs=37.3
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~-~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSA-ARVIAVDLDDDRLALARE 214 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 56888999999986 8888899988632 479999999998888764
No 331
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.30 E-value=0.18 Score=34.60 Aligned_cols=45 Identities=16% Similarity=0.214 Sum_probs=36.4
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGA-SRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 45788999999885 8888888888654 369999999988887763
No 332
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=93.25 E-value=0.72 Score=31.04 Aligned_cols=45 Identities=20% Similarity=0.296 Sum_probs=36.6
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
..++.+||-.|+|. |.++..+++..+. ..++++|.+++-++.+++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~-~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGA-KSVTAIDISSEKLALAKS 203 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCC-cEEEEEechHHHHHHHHH
Confidence 56788999999986 7888888888764 357899999988888764
No 333
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.20 E-value=0.12 Score=35.62 Aligned_cols=45 Identities=24% Similarity=0.311 Sum_probs=37.2
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga-~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGA-SRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTC-SCEEEECSCTTHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 45788999999985 8899999998764 369999999988887763
No 334
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=93.08 E-value=0.2 Score=34.30 Aligned_cols=45 Identities=20% Similarity=0.305 Sum_probs=36.3
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-++.+++
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGA-KRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEEcCCHHHHHHHHH
Confidence 45788999999875 8888888888654 369999999988887763
No 335
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.03 E-value=0.45 Score=32.13 Aligned_cols=44 Identities=20% Similarity=0.229 Sum_probs=36.1
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. +|++++.+++-++.+++
T Consensus 162 ~~~g~~VlV~GaG~vG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 162 AKPGEWVAIYGIGGLGHVAVQYAKAMGL--NVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CCTTCEEEEECCSTTHHHHHHHHHHTTC--EEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH
Confidence 66888999999974 7888888887654 79999999988887753
No 336
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=93.02 E-value=0.21 Score=34.20 Aligned_cols=45 Identities=22% Similarity=0.318 Sum_probs=36.6
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga-~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGA-SRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 45788999999886 8888888888754 369999999988888764
No 337
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=92.91 E-value=0.27 Score=33.84 Aligned_cols=45 Identities=20% Similarity=0.310 Sum_probs=36.2
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|++++.+++-.+.+++
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGA-ENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTB-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCC-ceEEEEcCCHHHHHHHHH
Confidence 45678999999875 8888888888652 379999999988887763
No 338
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=92.90 E-value=0.17 Score=34.53 Aligned_cols=44 Identities=25% Similarity=0.299 Sum_probs=36.8
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||.+|+|. |..+..+++..+. +|++++.+++-++.+++
T Consensus 177 ~~~g~~VlV~GaG~vG~~~~qlak~~Ga--~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 177 CGPGKKVGIVGLGGIGSMGTLISKAMGA--ETYVISRSSRKREDAMK 221 (360)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHH
Confidence 56888999999975 8888888888765 69999999888887765
No 339
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=92.85 E-value=0.45 Score=32.11 Aligned_cols=46 Identities=24% Similarity=0.261 Sum_probs=34.5
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
..++.+||-+|+|. |.++..+++..+ ..+|+++|.+++-.+.+++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhhc
Confidence 56788999999987 566666666543 24899999999877777643
No 340
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.78 E-value=0.28 Score=33.20 Aligned_cols=43 Identities=14% Similarity=0.141 Sum_probs=36.2
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHh--CCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMM--GEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~--~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+ ++.+||-+|+|. |..+..+++.. +. +|+++|.+++-.+.+++
T Consensus 169 ~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga--~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 169 F-AEPVVIVNGIGGLAVYTIQILKALMKNI--TIVGISRSKKHRDFALE 214 (344)
T ss_dssp C-SSCEEEEECCSHHHHHHHHHHHHHCTTC--EEEEECSCHHHHHHHHH
T ss_pred C-CCCEEEEECCCHHHHHHHHHHHHhcCCC--EEEEEeCCHHHHHHHHH
Confidence 5 788999999975 88888888887 65 69999999988887764
No 341
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=92.76 E-value=0.32 Score=33.17 Aligned_cols=44 Identities=18% Similarity=0.265 Sum_probs=36.2
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHh-CCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMM-GEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~-~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++.. +. +|+++|.+++-.+.+++
T Consensus 184 ~~~g~~VlV~GaG~vG~~avqlak~~~Ga--~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 184 LYPGAYVAIVGVGGLGHIAVQLLKVMTPA--TVIALDVKEEKLKLAER 229 (359)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCC--eEEEEeCCHHHHHHHHH
Confidence 56788999999975 78888888887 65 79999999988887763
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.70 E-value=0.25 Score=33.87 Aligned_cols=45 Identities=18% Similarity=0.279 Sum_probs=36.2
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGA-ARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-SEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHHH
Confidence 45788999999886 8888888888653 369999999988887753
No 343
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=92.40 E-value=0.25 Score=37.35 Aligned_cols=47 Identities=21% Similarity=0.111 Sum_probs=36.3
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC----cEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH----GKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~----~~v~~vD~s~~~~~~a~~~~~ 93 (110)
+..+|||+-||.|.++.-+...++.. -.+.++|+++.+++.-+.|..
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 34589999999999999887763110 137899999999988887754
No 344
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.37 E-value=0.22 Score=34.00 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=25.2
Q ss_pred CCCCeEEEecC------CcChhHHHHHHHhCCC-cEEEEEeCCHH
Q psy5585 46 ENGKRALDVGS------GSGYLTTCMALMMGEH-GKAVGIDHIPD 83 (110)
Q Consensus 46 ~~~~~vldiGc------G~G~~~~~l~~~~~~~-~~v~~vD~s~~ 83 (110)
+.+++|||+|+ .-|. ..+.+. .+. +.|+++|+.+-
T Consensus 108 p~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~~ 149 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLNDF 149 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSCC
T ss_pred cCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCccc
Confidence 46789999997 3455 344445 565 49999999873
No 345
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=92.23 E-value=0.18 Score=33.72 Aligned_cols=43 Identities=23% Similarity=0.108 Sum_probs=36.1
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+|. |..+..+++..+. +|++++ +++-.+.+++
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY--VVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC--EEEEEC-SSCCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC--EEEEEE-ChhhHHHHHH
Confidence 45788999999975 8999999998765 799999 8887777764
No 346
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=91.80 E-value=1.2 Score=30.45 Aligned_cols=48 Identities=21% Similarity=0.223 Sum_probs=36.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.+...|+.+|||.......+.... ++.+++-||. ++.++.-++.+...
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~-~~~~~~EvD~-P~vi~~K~~~l~~~ 143 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMF-PHLAYVDIDY-NESVELKNSILRES 143 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHC-TTEEEEEEEC-HHHHHHHHHHHHHS
T ss_pred CCCcEEEEeCCCCccHHHHhcCcC-CCCEEEECCC-HHHHHHHHHHhhhc
Confidence 355789999999999999998763 3446777777 77887777776654
No 347
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=91.68 E-value=0.051 Score=37.71 Aligned_cols=46 Identities=13% Similarity=-0.013 Sum_probs=32.4
Q ss_pred CCeEEEecCCcChhHHHHHHH---------------hCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALM---------------MGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~---------------~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
..+|+|+||++|..++.+... -.+.-+|+..|......+..-+.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~ 112 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLP 112 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTT
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcc
Confidence 357999999999877765543 1234578899988877766655443
No 348
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=91.43 E-value=0.28 Score=33.16 Aligned_cols=44 Identities=11% Similarity=0.181 Sum_probs=36.4
Q ss_pred cCCCCeEEEecCC--cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSG--SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG--~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+| .|..+..+++..+. +|++++.+++-++.+++
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF--RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSSTTHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 4678899999987 58888888888765 79999999887777765
No 349
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=91.40 E-value=0.42 Score=37.48 Aligned_cols=44 Identities=23% Similarity=0.076 Sum_probs=36.3
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
-+++|+-||.|.+++.+...+-. ..+.++|+++.+++.-+.|+.
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~-~vv~avEid~~A~~ty~~N~p 584 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGIS-DTLWAIEMWDPAAQAFRLNNP 584 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSE-EEEEEECSSHHHHHHHHHHCT
T ss_pred CeEEEeccCccHHHHHHHHCCCC-ceEEEEECCHHHHHHHHHhCC
Confidence 48999999999999999887421 247899999999988887764
No 350
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.25 E-value=0.43 Score=27.82 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=26.9
Q ss_pred CeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~ 90 (110)
++++-+|+| ..+..+++.+... .+|+++|.+++.++.+.+
T Consensus 7 ~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 7 YEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp CSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 578889986 4555555443222 269999999988776653
No 351
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.06 E-value=0.65 Score=31.41 Aligned_cols=44 Identities=27% Similarity=0.456 Sum_probs=35.2
Q ss_pred cCCCCeEEEecCC--cChhHHHHHHHh-CCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGSG--SGYLTTCMALMM-GEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGcG--~G~~~~~l~~~~-~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||..|+| .|..+..+++.. +. +|+++|.+++..+.+++
T Consensus 168 ~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 168 LDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKR 214 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHH
Confidence 5678899999998 467777777776 55 69999999988887754
No 352
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.04 E-value=0.58 Score=31.37 Aligned_cols=44 Identities=23% Similarity=0.296 Sum_probs=35.8
Q ss_pred cCCCCeEEEec-CC-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVG-SG-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.| +| .|..+..+++..+. +|++++.+++-++.+++
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA--KLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 45788999999 45 48888888888765 79999999988887764
No 353
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=90.87 E-value=0.74 Score=31.10 Aligned_cols=44 Identities=14% Similarity=0.251 Sum_probs=35.6
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||..|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGA--RVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh
Confidence 457789999998 458888888887654 79999999988887764
No 354
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.84 E-value=0.62 Score=27.29 Aligned_cols=41 Identities=27% Similarity=0.157 Sum_probs=26.5
Q ss_pred CCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 48 GKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 48 ~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
...|+-+|+|. |......+...+. .|+++|.+++.++.+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE 48 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH
Confidence 35788889864 4333333333233 69999999998877653
No 355
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=90.59 E-value=0.45 Score=29.36 Aligned_cols=43 Identities=21% Similarity=0.236 Sum_probs=32.2
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+.++++||..|+ |.|.....+++..+. +|+++|.+++..+.++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHH
Confidence 457889999994 346666777766554 7999999988776664
No 356
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.51 E-value=0.51 Score=31.96 Aligned_cols=44 Identities=27% Similarity=0.243 Sum_probs=34.2
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++++||..|+ |.|..+..+++..+. +|+++|.+++..+.+++
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga--~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMGY--RVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC--cEEEEcCCHHHHHHHHH
Confidence 567889999998 357777777777554 79999999887776654
No 357
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=90.46 E-value=0.26 Score=36.71 Aligned_cols=42 Identities=10% Similarity=0.018 Sum_probs=30.8
Q ss_pred CCCeEEEecCCcChhHHHHHHHhC-----------CCcEEEEEeC---CHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMG-----------EHGKAVGIDH---IPDLVNSS 88 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~-----------~~~~v~~vD~---s~~~~~~a 88 (110)
+.-+|+|+|.|+|...+.+.+.+. ...+++++|. +.+-+..+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~ 113 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASA 113 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHH
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHH
Confidence 345899999999999999887641 1257999999 44444443
No 358
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.31 E-value=0.72 Score=31.00 Aligned_cols=44 Identities=14% Similarity=0.303 Sum_probs=35.1
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+ | .|..+..+++..+. +|++++.+++-++.+++
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGA--HTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 457889999994 4 48888888888655 79999999988877764
No 359
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=90.19 E-value=0.7 Score=31.02 Aligned_cols=43 Identities=19% Similarity=0.227 Sum_probs=33.5
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+.++++||..|+ |.|..+..+++..+. +|+++|.+++.++.++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGC--KVVGAAGSDEKIAYLK 187 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence 557889999998 457777777776554 7999999988877773
No 360
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.17 E-value=0.81 Score=31.25 Aligned_cols=44 Identities=16% Similarity=0.194 Sum_probs=35.6
Q ss_pred cCCCCeEEEec-CC-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVG-SG-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.| +| .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKC--HVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHH
Confidence 56788999999 44 48888888888655 79999999888777764
No 361
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=90.01 E-value=0.68 Score=34.30 Aligned_cols=41 Identities=7% Similarity=0.020 Sum_probs=31.2
Q ss_pred CeEEEecCCcChhHHHHHHHhC-----------CCcEEEEEeC---CHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMG-----------EHGKAVGIDH---IPDLVNSSV 89 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~-----------~~~~v~~vD~---s~~~~~~a~ 89 (110)
-+|+|+|.|+|...+.....+. ..-+++++|. +.+-+..+.
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~ 122 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAH 122 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHH
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHH
Confidence 4899999999999988877641 1246899999 776666443
No 362
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=89.58 E-value=0.69 Score=31.31 Aligned_cols=43 Identities=23% Similarity=0.208 Sum_probs=34.5
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+||-+|+|. |..+..+++..+. .+|+++|.+++-.+.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGA-YPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTC-CSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 778999999975 7888888887653 269999999988877764
No 363
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.55 E-value=0.68 Score=31.50 Aligned_cols=45 Identities=18% Similarity=0.190 Sum_probs=34.1
Q ss_pred cCCC------CeEEEecCCc-ChhH-HHHH-HHhCCCcEEEEEeCCHH---HHHHHHH
Q psy5585 45 LENG------KRALDVGSGS-GYLT-TCMA-LMMGEHGKAVGIDHIPD---LVNSSVK 90 (110)
Q Consensus 45 ~~~~------~~vldiGcG~-G~~~-~~l~-~~~~~~~~v~~vD~s~~---~~~~a~~ 90 (110)
+.++ .+||-+|+|. |..+ ..++ +..+. .+|+++|.+++ -.+.+++
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga-~~Vi~~~~~~~~~~~~~~~~~ 220 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGY-ENLYCLGRRDRPDPTIDIIEE 220 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCC-CEEEEEECCCSSCHHHHHHHH
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCC-cEEEEEeCCcccHHHHHHHHH
Confidence 5677 8999999865 7777 7777 76554 24999999987 7777753
No 364
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=89.51 E-value=0.76 Score=31.29 Aligned_cols=43 Identities=23% Similarity=0.275 Sum_probs=34.8
Q ss_pred cC-CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LE-NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~-~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+. ++.+||-+|+|. |..+..+++..+. +|++++.+++-.+.++
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga--~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGH--HVTVISSSNKKREEAL 221 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTC--EEEEEESSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC--eEEEEeCChHHHHHHH
Confidence 45 788999999885 8888888888765 7999999987766655
No 365
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.38 E-value=0.43 Score=31.64 Aligned_cols=44 Identities=18% Similarity=0.277 Sum_probs=35.3
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+ | .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL--RVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC--EEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHh
Confidence 567889999998 3 48888888888654 79999999887777653
No 366
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=89.35 E-value=0.61 Score=31.33 Aligned_cols=42 Identities=21% Similarity=0.262 Sum_probs=34.7
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
+.++++||-.|+ |.|..+..+++..+. +|++++.+++-.+.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC--RVVGIAGGAEKCRFL 190 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHH
Confidence 568889999998 358888888887655 799999999877776
No 367
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=88.98 E-value=2.2 Score=26.35 Aligned_cols=34 Identities=9% Similarity=0.117 Sum_probs=29.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCC
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHI 81 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s 81 (110)
-..-|||+|-|+|..--.+.+.+ ++-.|+.+|-.
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~-P~R~I~vfDR~ 73 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHV-QGREIYVFERA 73 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHC-CSSCEEEEESS
T ss_pred CCCceEEecCCCChhHHHHHHhC-CCCcEEEEEee
Confidence 45689999999999999999998 55689998854
No 368
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.86 E-value=0.81 Score=30.80 Aligned_cols=44 Identities=23% Similarity=0.213 Sum_probs=34.9
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||..|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~ 198 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGC--YVVGSAGSKEKVDLLKT 198 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 557889999997 358888888887654 79999999887777753
No 369
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=88.62 E-value=0.33 Score=33.27 Aligned_cols=43 Identities=12% Similarity=0.044 Sum_probs=32.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
+.++|+-+|| |..+..+++.+..+..|+..|.+..-++.+++.
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~ 57 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF 57 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc
Confidence 5578999998 566666676665556899999998877766543
No 370
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.46 E-value=1 Score=31.71 Aligned_cols=44 Identities=23% Similarity=0.316 Sum_probs=35.9
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+|+ | .|..+..+++..+. ++++++.+++-++.+++
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~~Ga--~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALAGGA--NPICVVSSPQKAEICRA 271 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC--eEEEEECCHHHHHHHHh
Confidence 457889999998 5 48889999998765 78999999888888764
No 371
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.46 E-value=0.73 Score=31.18 Aligned_cols=44 Identities=23% Similarity=0.293 Sum_probs=35.9
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+ | .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGA--KVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 457889999998 4 48888889988765 79999999887777765
No 372
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.44 E-value=1.3 Score=29.99 Aligned_cols=42 Identities=24% Similarity=0.372 Sum_probs=34.6
Q ss_pred CCCeEEEe-cCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDV-GSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldi-GcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+||-+ |+|. |..+..+++..+. +|++++.+++-++.+++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL--RVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 67899999 5664 8888888988765 79999999988888765
No 373
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=88.18 E-value=1.3 Score=30.08 Aligned_cols=44 Identities=16% Similarity=0.203 Sum_probs=35.1
Q ss_pred cCCCCeEEEec-CC-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVG-SG-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.| +| .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGA--EVYATAGSTGKCEACER 210 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 45788999994 44 48888888888665 79999999988887765
No 374
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.07 E-value=1.3 Score=27.00 Aligned_cols=40 Identities=18% Similarity=0.156 Sum_probs=25.4
Q ss_pred CCeEEEecCCc-ChhHHHHHHHh-CCCcEEEEEeCCHHHHHHHH
Q psy5585 48 GKRALDVGSGS-GYLTTCMALMM-GEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 48 ~~~vldiGcG~-G~~~~~l~~~~-~~~~~v~~vD~s~~~~~~a~ 89 (110)
+.+|+-+|+|. |......+... +. +|+++|.+++.++.++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~ 80 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHR 80 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHH
Confidence 45788888764 43333333322 33 5999999998776654
No 375
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=87.79 E-value=1.1 Score=31.53 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=34.3
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+|+-+|+|. |.....+++.++. +|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA--VVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHH
Confidence 567999999996 8888888888776 79999999987766654
No 376
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=87.78 E-value=1.3 Score=30.09 Aligned_cols=44 Identities=20% Similarity=0.282 Sum_probs=34.1
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+ |.|..+..+++..+. +|++++.+++..+.+++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGL--KILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCChhHHHHHHH
Confidence 457889999997 347777778877654 79999999987776653
No 377
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=87.68 E-value=1.8 Score=24.70 Aligned_cols=40 Identities=23% Similarity=0.224 Sum_probs=25.6
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~ 89 (110)
+++|+-+|+| ..+..+++.+... .+|+.+|.+++.++...
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~ 44 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKAS 44 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 3678888875 5555555443221 26999999988766554
No 378
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.45 E-value=1.3 Score=30.19 Aligned_cols=43 Identities=28% Similarity=0.361 Sum_probs=34.2
Q ss_pred cC-CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LE-NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~-~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+. ++.+||-+|+|. |..+..+++..+. +|++++.+++-.+.+.
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGS--KVTVISTSPSKKEEAL 228 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGHHHHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence 45 788999999875 7888888887654 7999999987766655
No 379
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=86.48 E-value=1.4 Score=30.76 Aligned_cols=42 Identities=26% Similarity=0.380 Sum_probs=33.5
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+|+-+|+|. |.....+++.++. +|+++|.++.-++.+.+
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 567999999996 8777778887776 79999999876666543
No 380
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=86.46 E-value=1.3 Score=35.79 Aligned_cols=46 Identities=22% Similarity=0.062 Sum_probs=37.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
...+++|+-||.|.+++.+...+ -...+.++|+++.+++.-+.|+.
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG-~~~vv~avEid~~A~~ty~~N~p 895 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAG-ISETLWAIEMWDPAAQAFRLNNP 895 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTT-SEEEEEEECCSHHHHHHHHHHCT
T ss_pred CCceEEecccCccHHHHHHHHCC-CCceEEEEECCHHHHHHHHHhCC
Confidence 34589999999999999998873 21248899999999988887764
No 381
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=86.32 E-value=1.2 Score=30.36 Aligned_cols=43 Identities=16% Similarity=0.156 Sum_probs=33.9
Q ss_pred CCCeEEEec-CCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVG-SGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+||-.| +|. |..+..+++..+ ..+|++++.+++-.+.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH
Confidence 567899998 665 899999998742 2379999999988887764
No 382
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=86.22 E-value=0.92 Score=31.06 Aligned_cols=35 Identities=23% Similarity=0.322 Sum_probs=26.1
Q ss_pred CCCeEEEecCCcChhHHH--HHHHhCCCcEEEEEeCCH
Q psy5585 47 NGKRALDVGSGSGYLTTC--MALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~--l~~~~~~~~~v~~vD~s~ 82 (110)
++++|+-||.|.|.++.+ |++. +++.+|+.+|.++
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~-~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLA-DPSIEVTLIEPNE 37 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSCS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhc-CcCCeEEEEeCCC
Confidence 367899999999766555 4454 5666899999876
No 383
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=86.18 E-value=2.1 Score=29.53 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=32.0
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+|+-+|+|. |......++.++. +|+++|.++..++.+.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga--~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGA--TVTVLDINIDKLRQLDA 209 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHH
Confidence 567999999975 6666666666654 79999999987766654
No 384
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=86.06 E-value=1.1 Score=30.74 Aligned_cols=43 Identities=21% Similarity=0.179 Sum_probs=33.3
Q ss_pred CCCCeEEEe--cCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDV--GSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldi--GcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.++.+||-+ |+|. |..+..+++..+. +|++++.+++-.+.+++
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga--~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGI--KLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTC--CEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHh
Confidence 567788888 5553 7777888888765 69999999988887764
No 385
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=85.91 E-value=1.6 Score=30.52 Aligned_cols=40 Identities=18% Similarity=0.304 Sum_probs=32.0
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
++.+|+-+|+|. |..+..+++.++. +|+++|.++...+.+
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga--~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA--IVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCGGGHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEcCCHHHHHHH
Confidence 467899999996 7777778887765 799999998766555
No 386
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=85.87 E-value=1.8 Score=30.31 Aligned_cols=44 Identities=16% Similarity=0.125 Sum_probs=35.2
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+ | .|..+..+++..+. ++++++.+++-++.+++
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~~Ga--~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKNGGG--IPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 457889999997 4 38888888888655 79999999888877754
No 387
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=85.76 E-value=2.1 Score=30.99 Aligned_cols=43 Identities=21% Similarity=0.138 Sum_probs=33.0
Q ss_pred cCCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
..++++|+-+|+|. |......++.++. +|+++|.++...+.+.
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~Ga--~Viv~d~~~~~~~~A~ 314 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQGA--RVSVTEIDPINALQAM 314 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence 35788999999986 7666666676654 7999999998766554
No 388
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=85.61 E-value=1.6 Score=29.67 Aligned_cols=41 Identities=20% Similarity=0.139 Sum_probs=32.1
Q ss_pred CCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCH---HHHHHHHH
Q psy5585 48 GKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIP---DLVNSSVK 90 (110)
Q Consensus 48 ~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~---~~~~~a~~ 90 (110)
+.+||-+|+|. |..+..+++..+. +|++++.++ +-.+.+++
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHH
Confidence 88999999964 7777777777655 799999987 66666653
No 389
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=85.55 E-value=1.7 Score=28.99 Aligned_cols=44 Identities=20% Similarity=0.288 Sum_probs=34.0
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++++||..|+ |.|.....+++..+. +|++++.+++..+.+++
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH
Confidence 457789999993 347777777777654 79999999888777764
No 390
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=85.46 E-value=2 Score=28.97 Aligned_cols=43 Identities=19% Similarity=0.271 Sum_probs=33.8
Q ss_pred cCCCCeEEEec-CC-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVG-SG-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiG-cG-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+| +| .|..+..+++..+. +|+++ .+++-++.+++
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga--~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGA--RVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEE-ECHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC--EEEEE-eCHHHHHHHHH
Confidence 45788999999 44 48888889988765 79999 88887777654
No 391
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=85.11 E-value=2.3 Score=23.39 Aligned_cols=40 Identities=15% Similarity=0.055 Sum_probs=26.5
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCC--cEEEEEeCCHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEH--GKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~--~~v~~vD~s~~~~~~a~ 89 (110)
.++|+-+|+ |..+..+++.+... .+|+++|.++.-++...
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 457999998 55555555543222 37999999987665543
No 392
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=84.91 E-value=2 Score=29.30 Aligned_cols=42 Identities=21% Similarity=0.207 Sum_probs=31.7
Q ss_pred cCCCCeEEEec-CCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LENGKRALDVG-SGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~~~~~vldiG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+.++.+||-.| +|. |..+..+++..+. +|++++ +++-.+.++
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga--~Vi~~~-~~~~~~~~~ 224 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA--HVTAVC-SQDASELVR 224 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEE-CGGGHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC--EEEEEe-ChHHHHHHH
Confidence 45678999999 564 8888888888664 799998 666566554
No 393
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=84.72 E-value=3.7 Score=27.08 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=26.6
Q ss_pred CCCCeEEEecCCcChhHHHHHHH---h---CCCcEEEEEe
Q psy5585 46 ENGKRALDVGSGSGYLTTCMALM---M---GEHGKAVGID 79 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~~---~---~~~~~v~~vD 79 (110)
.-...|+|+|+-.|..+..++.. . +.+.+|+++|
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fD 107 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFD 107 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEE
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEE
Confidence 45679999999999998887653 1 2456899999
No 394
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=84.60 E-value=0.67 Score=31.30 Aligned_cols=43 Identities=23% Similarity=0.325 Sum_probs=34.0
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++.+||-+|+|. |..+..+++..+. .+|++++.+++-++.+++
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga-~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGA-GPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTC-CSEEEECSCHHHHGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-CEEEEECCCHHHHHHHHH
Confidence 778999999975 7888888887653 269999999887776654
No 395
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=84.60 E-value=1.5 Score=29.81 Aligned_cols=35 Identities=23% Similarity=0.265 Sum_probs=22.9
Q ss_pred CCCeEEEecCCcChhHHHHHH---HhCCCc--EEEEEeCC
Q psy5585 47 NGKRALDVGSGSGYLTTCMAL---MMGEHG--KAVGIDHI 81 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~---~~~~~~--~v~~vD~s 81 (110)
+.-+|+|+|-|+|...+.... ...++. +++++|..
T Consensus 96 ~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~ 135 (308)
T 3vyw_A 96 KVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKE 135 (308)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESS
T ss_pred CCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHH
Confidence 335799999999987755433 223433 56777753
No 396
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.19 E-value=3.1 Score=27.84 Aligned_cols=44 Identities=18% Similarity=0.258 Sum_probs=34.3
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-.|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGA--TVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 457789999995 457777778877654 79999999987777754
No 397
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=84.14 E-value=2.1 Score=25.29 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=25.4
Q ss_pred CCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 46 ENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 46 ~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
.++.+|+-+|+|. |......+...+. +|+++|.+++.++.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDKNEYAFHR 57 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGGGG
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHH
Confidence 4667899999864 4333333333232 79999999876544
No 398
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.99 E-value=2.4 Score=28.78 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=33.8
Q ss_pred cCCCCeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||..|+ |.|..+..+++..+. +|++++.+++.++.+++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga--~Vi~~~~~~~~~~~~~~ 205 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGA--IPLVTAGSQKKLQMAEK 205 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHH
Confidence 457789999984 347777777777554 79999999988877743
No 399
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=83.93 E-value=0.76 Score=32.78 Aligned_cols=37 Identities=27% Similarity=0.411 Sum_probs=24.0
Q ss_pred CeEEEecCCcChhHHHHHHHh---CCCcEEEEEeCCHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMM---GEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~---~~~~~v~~vD~s~~~~~~a~ 89 (110)
.+|--+|+| +.++.++-.+ +. +|+|+|+++.-++..+
T Consensus 22 ~~IaViGlG--YVGLp~A~~~A~~G~--~V~g~Did~~kV~~ln 61 (444)
T 3vtf_A 22 ASLSVLGLG--YVGVVHAVGFALLGH--RVVGYDVNPSIVERLR 61 (444)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHHTC--EEEEECSCHHHHHHHH
T ss_pred CEEEEEccC--HHHHHHHHHHHhCCC--cEEEEECCHHHHHHHH
Confidence 367788776 4444333322 33 6999999998776653
No 400
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=83.78 E-value=1.8 Score=29.99 Aligned_cols=41 Identities=20% Similarity=0.186 Sum_probs=32.3
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
++.+|+-+|+|. |.....+++.++. +|+.+|.++...+.++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga--~V~~~d~~~~~~~~~~ 212 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA--VVMATDVRAATKEQVE 212 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCSTTHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHH
Confidence 577999999996 7777888887765 6999999976555543
No 401
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=83.65 E-value=2.7 Score=27.82 Aligned_cols=41 Identities=27% Similarity=0.427 Sum_probs=28.9
Q ss_pred CeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 49 ~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
++|.-||+|. |. ++..+++. +. +|+.+|.+++.++.+++.+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~-G~--~V~~~d~~~~~~~~~~~~i 58 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAAT-GH--TVVLVDQTEDILAKSKKGI 58 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC--EEEEECSCHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC--eEEEEECCHHHHHHHHHHH
Confidence 5799999986 43 44555554 33 6999999998888765443
No 402
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.39 E-value=3.1 Score=27.68 Aligned_cols=43 Identities=16% Similarity=0.120 Sum_probs=32.6
Q ss_pred cCCCCeEEEec-CCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGKRALDVG-SGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~~vldiG-cG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++.+||-+| +|. |..+..+++..+. +|++++ +++-.+.+++
T Consensus 150 ~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga--~vi~~~-~~~~~~~~~~ 194 (321)
T 3tqh_A 150 VKQGDVVLIHAGAGGVGHLAIQLAKQKGT--TVITTA-SKRNHAFLKA 194 (321)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEE-CHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcCC--EEEEEe-ccchHHHHHH
Confidence 56888999997 775 9999999998765 788887 4444555543
No 403
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.23 E-value=4.1 Score=27.89 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=32.8
Q ss_pred CCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 48 GKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 48 ~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
+.+|+-+|+|. |.....+++..+. +|+++|.+++-++.+.+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~ 210 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLF 210 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhh
Confidence 47999999975 6666667776655 7999999998777766543
No 404
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=83.09 E-value=4.2 Score=26.67 Aligned_cols=41 Identities=20% Similarity=0.257 Sum_probs=27.8
Q ss_pred CeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 49 ~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
++|.-||+|+ |. ++..++.. +. +|+.+|.+++.++.+.+.+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~-G~--~V~l~d~~~~~~~~~~~~i 47 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFH-GF--AVTAYDINTDALDAAKKRF 47 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC--EEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhC-CC--eEEEEeCCHHHHHHHHHHH
Confidence 4688888875 33 23333333 33 6999999999888877664
No 405
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=82.74 E-value=1.8 Score=28.78 Aligned_cols=39 Identities=10% Similarity=0.136 Sum_probs=32.8
Q ss_pred eEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 50 RALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 50 ~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.||-.|+ | .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga--~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY--QVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHh
Confidence 4999997 4 49999999998765 79999999988888865
No 406
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=82.30 E-value=2.4 Score=30.14 Aligned_cols=43 Identities=12% Similarity=0.102 Sum_probs=31.7
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~~~ 92 (110)
.++|+-+||| ..+..+++.+...+ .|+.+|.+++.++.+...+
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~ 46 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY 46 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc
Confidence 4677777775 67777777764434 6999999999988776543
No 407
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=81.75 E-value=4 Score=27.61 Aligned_cols=41 Identities=27% Similarity=0.292 Sum_probs=29.4
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
.+|--||+|+ | .++..+++. +. +|+.+|.+++.++.+.+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~-G~--~V~l~d~~~~~~~~~~~~i 49 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG-GF--RVKLYDIEPRQITGALENI 49 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC--CEEEECSCHHHHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC-CC--EEEEEeCCHHHHHHHHHHH
Confidence 5788899886 3 444555555 33 5999999999988886654
No 408
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=81.74 E-value=2.9 Score=29.38 Aligned_cols=41 Identities=27% Similarity=0.333 Sum_probs=26.8
Q ss_pred CCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCHHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~ 90 (110)
...|+-+|+|. ++..+++.+.. .-.|+++|.+++.++.+++
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~~vvvId~d~~~v~~~~~ 45 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGVKMVVLDHDPDHIETLRK 45 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEECCHHHHHHHHH
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHh
Confidence 35688888864 44444443221 1259999999999888763
No 409
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.50 E-value=4.5 Score=27.76 Aligned_cols=42 Identities=19% Similarity=0.177 Sum_probs=30.1
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++++|+-+|+|. |......++..+. +|+++|.+++.++.+.+
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~ 207 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDD 207 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHH
Confidence 457899999964 5555555555554 79999999887666544
No 410
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=81.26 E-value=1.3 Score=29.71 Aligned_cols=44 Identities=20% Similarity=0.185 Sum_probs=33.8
Q ss_pred cCCCC-eEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGK-RALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~-~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++. +||-+|+ | .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGY--DVVASTGNREAADYLKQ 193 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTC--CEEEEESSSSTHHHHHH
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 44554 8999997 4 48888888888765 69999998877777754
No 411
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=80.65 E-value=3.3 Score=29.74 Aligned_cols=42 Identities=17% Similarity=0.319 Sum_probs=30.0
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
++|--||+|+ | .++..+++. +. +|+.+|.+++.++.+.+.+.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~a-G~--~V~l~D~~~e~l~~~~~~i~ 49 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASH-GH--QVLLYDISAEALTRAIDGIH 49 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHT-TC--CEEEECSCHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHHC-CC--eEEEEECCHHHHHHHHHHHH
Confidence 4677888886 3 445555555 33 59999999999988876543
No 412
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=79.63 E-value=1.1 Score=29.94 Aligned_cols=44 Identities=18% Similarity=0.107 Sum_probs=33.9
Q ss_pred cCCCC-eEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENGK-RALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~~-~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++. +||-+|+ | .|..+..+++..+. +|++++.+++-.+.+++
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga--~vi~~~~~~~~~~~~~~ 192 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGY--TVEASTGKAAEHDYLRV 192 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTC--CEEEEESCTTCHHHHHH
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHH
Confidence 44554 7999997 4 48888899988765 69999999877777754
No 413
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=79.40 E-value=6.7 Score=26.58 Aligned_cols=37 Identities=19% Similarity=0.104 Sum_probs=30.4
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCC---CcEEEEEeCCHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGE---HGKAVGIDHIPD 83 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~---~~~v~~vD~s~~ 83 (110)
.+..|+=+|||.|.....+++.++. .-+.+.+|..+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 3569999999999999999998642 358999999764
No 414
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=78.91 E-value=4.7 Score=27.22 Aligned_cols=45 Identities=18% Similarity=0.259 Sum_probs=33.5
Q ss_pred cCCC--CeEEEecC--CcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 45 LENG--KRALDVGS--GSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 45 ~~~~--~~vldiGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+.++ .+||-.|+ |.|..+..+++..+. ++|++++.+++-.+.+++
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga-~~Vi~~~~~~~~~~~~~~ 204 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGC-SRVVGICGTHEKCILLTS 204 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTC-SEEEEEESCHHHHHHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCC-CeEEEEeCCHHHHHHHHH
Confidence 5677 89999998 347777777776543 279999999877776654
No 415
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=77.23 E-value=6.8 Score=24.70 Aligned_cols=41 Identities=7% Similarity=-0.192 Sum_probs=29.8
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
....++-+|+ |..+..+++.+...+.|+++|.+++.++.+.
T Consensus 8 ~~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~ 48 (234)
T 2aef_A 8 KSRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR 48 (234)
T ss_dssp --CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH
T ss_pred CCCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh
Confidence 3457888887 5888888888755445999999988776554
No 416
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=76.93 E-value=10 Score=23.86 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=28.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~~~ 92 (110)
.++++|-.|+ +|.++..+++.+-..+ +|+.++.++...+...+.+
T Consensus 10 ~~~~vlVtGa-sggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 55 (255)
T 1fmc_A 10 DGKCAIITGA-GAGIGKEIAITFATAGASVVVSDINADAANHVVDEI 55 (255)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 4567777774 4666666666543333 7888888876655444443
No 417
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=76.90 E-value=7 Score=27.85 Aligned_cols=39 Identities=21% Similarity=0.117 Sum_probs=30.2
Q ss_pred CCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHH
Q psy5585 46 ENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVN 86 (110)
Q Consensus 46 ~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~ 86 (110)
..+++++-+|+|. |......++.++. +|+++|.++....
T Consensus 218 L~GktV~ViG~G~IGk~vA~~Lra~Ga--~Viv~D~dp~ra~ 257 (435)
T 3gvp_A 218 FGGKQVVVCGYGEVGKGCCAALKAMGS--IVYVTEIDPICAL 257 (435)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHH
T ss_pred ecCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCChhhhH
Confidence 3778999999996 7777777777665 7999999986443
No 418
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=76.49 E-value=7.3 Score=25.89 Aligned_cols=50 Identities=24% Similarity=0.189 Sum_probs=34.7
Q ss_pred hhhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 31 PHMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 31 ~~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
......+...++ ....+.+|+-+|.|..++.+. + .+++.-|++++.+..-
T Consensus 22 ~~l~~~i~~~lp---~~~~~yvEpF~GggaV~~~~~----~-~~~i~ND~n~~Lin~y 71 (284)
T 2dpm_A 22 RQLLPVIRELIP---KTYNRYFEPFVGGGALFFDLA----P-KDAVINDFNAELINCY 71 (284)
T ss_dssp GGGHHHHHHHSC---SSCSCEEETTCTTCHHHHHHC----C-SEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHhc---cccCEEEeecCCccHHHHhhh----c-cceeeeecchHHHHHH
Confidence 344455555442 124689999999999877652 2 3699999999887654
No 419
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=76.30 E-value=4.4 Score=25.34 Aligned_cols=38 Identities=16% Similarity=0.086 Sum_probs=24.7
Q ss_pred eEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHH
Q psy5585 50 RALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 50 ~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~ 89 (110)
+|+-+|+| ..+..+++.+... -.|+.+|.+++.++...
T Consensus 2 ~iiIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~l~ 40 (218)
T 3l4b_C 2 KVIIIGGE--TTAYYLARSMLSRKYGVVIINKDRELCEEFA 40 (218)
T ss_dssp CEEEECCH--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred EEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 57777764 5555555543221 26999999998777644
No 420
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=76.08 E-value=7.3 Score=27.67 Aligned_cols=41 Identities=20% Similarity=0.347 Sum_probs=28.3
Q ss_pred CeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 49 ~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
++|.-||+|. |. ++..++.. +. +|+.+|.+++.++.+.+.+
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~-G~--~V~l~D~~~~~~~~~~~~i 80 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV-GI--SVVAVESDPKQLDAAKKII 80 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TC--EEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC-CC--eEEEEECCHHHHHHHHHHH
Confidence 4789999986 43 33444444 33 6999999998888776543
No 421
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=75.46 E-value=11 Score=23.74 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=29.5
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNVEKS 95 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~ 95 (110)
.++++|-.|++ |.++..+++.+-.. .+|+.++.++...+...+.+...
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~ 52 (247)
T 3lyl_A 4 NEKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK 52 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc
Confidence 35677877855 44555555543322 27899999887776665555443
No 422
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=75.45 E-value=8.3 Score=24.93 Aligned_cols=33 Identities=30% Similarity=0.391 Sum_probs=22.3
Q ss_pred CCeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCH
Q psy5585 48 GKRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 48 ~~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~ 82 (110)
+.+|+-+|||. |. .+..|+.. +. ++++.+|.+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~-Gv-~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASA-GV-GNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHH-TC-SEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHc-CC-CeEEEEcCCC
Confidence 46899999984 43 33334444 44 5799999986
No 423
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=74.41 E-value=4.3 Score=26.90 Aligned_cols=47 Identities=15% Similarity=0.104 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHhhcCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 32 HMHAHALELLREHLENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 32 ~~~~~~~~~l~~~~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
.....+...+ ++..+.+|+-+|.|..++.+. + .+++.-|++++.+..
T Consensus 16 ~l~~~i~~~~----p~~~~yvEpF~Ggg~V~~~~~----~-~~~i~ND~n~~lin~ 62 (278)
T 2g1p_A 16 PLLDDIKRHL----PKGECLVEPFVGAGSVFLNTD----F-SRYILADINSDLISL 62 (278)
T ss_dssp GGHHHHHHHC----CCCSEEEETTCTTCHHHHTCC----C-SEEEEEESCHHHHHH
T ss_pred HHHHHHHHhc----cccCeEEeeccCccHHHHhhc----c-cceEEEeccHHHHHH
Confidence 4444444444 346799999999999877542 2 369999999988753
No 424
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=74.12 E-value=3.8 Score=23.31 Aligned_cols=39 Identities=15% Similarity=0.186 Sum_probs=24.3
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSS 88 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a 88 (110)
..+|+-+|+| ..+..+++.+... .+|+.+|.+++.++.+
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~ 45 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAY 45 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTT
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 3468899974 5555555443221 2699999998765443
No 425
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.86 E-value=6.2 Score=26.88 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=32.9
Q ss_pred CCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.++.+||-+|+ | .|..+..+++..+. +|+++. +++-.+.+++
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga--~Vi~~~-~~~~~~~~~~ 206 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY--IPIATC-SPHNFDLAKS 206 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEE-CGGGHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC--EEEEEe-CHHHHHHHHH
Confidence 67789999999 3 59999999998765 688885 7776666653
No 426
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=73.61 E-value=2.9 Score=29.61 Aligned_cols=42 Identities=24% Similarity=0.494 Sum_probs=25.6
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~ 90 (110)
.+++.--+|.| +.+..++..+...| +|+++|.+++.++..++
T Consensus 10 ~~~~~~ViGlG--yvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~ 52 (431)
T 3ojo_A 10 HGSKLTVVGLG--YIGLPTSIMFAKHGVDVLGVDINQQTIDKLQN 52 (431)
T ss_dssp --CEEEEECCS--TTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred cCCccEEEeeC--HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHC
Confidence 34566777776 44444443332222 69999999988877654
No 427
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=73.51 E-value=14 Score=23.78 Aligned_cols=46 Identities=17% Similarity=0.126 Sum_probs=29.7
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~~ 93 (110)
.++++|-.|++ |.++..+++.+... .+|++++.++..++...+.+.
T Consensus 30 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~ 76 (272)
T 1yb1_A 30 TGEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCK 76 (272)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHH
Confidence 45678888854 56666666654322 379999998876665544443
No 428
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=72.79 E-value=10 Score=25.37 Aligned_cols=41 Identities=29% Similarity=0.449 Sum_probs=27.7
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++|.-||+|. | .++..+.+. +...+|+++|.+++.++.+.+
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~-G~~~~V~~~dr~~~~~~~a~~ 76 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAVD 76 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhC-CCCCEEEEEECCHHHHHHHHH
Confidence 6899999875 3 334444444 332369999999987777653
No 429
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=72.68 E-value=17 Score=23.67 Aligned_cols=49 Identities=20% Similarity=0.326 Sum_probs=33.4
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+++++|--|.+.| ++.++++.+.. ..+|+.+|.+++.++.+.+.++..+
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g 55 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMG 55 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 5678888887665 34444443322 2379999999998888877776654
No 430
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=72.04 E-value=14 Score=22.38 Aligned_cols=38 Identities=18% Similarity=0.165 Sum_probs=28.7
Q ss_pred eEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 50 RALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 50 ~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
++|-.| |+|.++..+++.+..+ +|++++-++...+...
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~ 39 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELA 39 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHH
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHH
Confidence 567677 4688888999887666 8999999886655443
No 431
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=71.92 E-value=10 Score=24.33 Aligned_cols=48 Identities=15% Similarity=0.039 Sum_probs=29.0
Q ss_pred CCCeEEEecCCcC-hhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHh
Q psy5585 47 NGKRALDVGSGSG-YLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 47 ~~~~vldiGcG~G-~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
+++++|--|++.+ .++..+++.+... .+|+.++.+++.++.+.+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~ 54 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQ 54 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGG
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh
Confidence 5678888886431 2333333332221 2699999998877777666554
No 432
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=71.47 E-value=9.9 Score=25.65 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=27.2
Q ss_pred cCCC-CeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCH
Q psy5585 45 LENG-KRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 45 ~~~~-~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~ 82 (110)
+.++ .+||-.|+ | .|..+..+++..+. +++++.-++
T Consensus 164 ~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga--~vi~~~~~~ 202 (364)
T 1gu7_A 164 LTPGKDWFIQNGGTSAVGKYASQIGKLLNF--NSISVIRDR 202 (364)
T ss_dssp CCTTTCEEEESCTTSHHHHHHHHHHHHHTC--EEEEEECCC
T ss_pred cCCCCcEEEECCCCcHHHHHHHHHHHHCCC--EEEEEecCc
Confidence 4577 89999997 5 48889999998765 677775443
No 433
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=71.46 E-value=14 Score=23.91 Aligned_cols=45 Identities=16% Similarity=0.221 Sum_probs=28.3
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~ 92 (110)
+++++|-.|++ |.++..+++.+... .+|++++-+++.++...+.+
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 72 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHC 72 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 45688888865 55555555543222 27999999887666554443
No 434
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=71.19 E-value=7.6 Score=26.11 Aligned_cols=40 Identities=13% Similarity=0.013 Sum_probs=29.9
Q ss_pred CeEEEe-cCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDV-GSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldi-GcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.++|-. |+|. |..+..+++..+. +|++++.+++-.+.+++
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga--~Vi~~~~~~~~~~~~~~ 207 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGF--RPIVTVRRDEQIALLKD 207 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTC--EEEEEESCGGGHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHH
Confidence 456554 5654 8888888888765 79999999887777764
No 435
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=70.98 E-value=8.1 Score=27.62 Aligned_cols=41 Identities=22% Similarity=0.318 Sum_probs=27.8
Q ss_pred CCCeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
..++|.-+|+|. |. ++..+++. +. +|+++|.+++.++..++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~~-G~--~V~~~d~~~~~v~~l~~ 49 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLADI-GH--DVFCLDVDQAKIDILNN 49 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TC--EEEEECSCHHHHHHHHT
T ss_pred CCceEEEECcCHHHHHHHHHHHhC-CC--EEEEEECCHHHHHHHHC
Confidence 446899998884 43 33344443 33 69999999988777654
No 436
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=69.95 E-value=14 Score=23.89 Aligned_cols=39 Identities=31% Similarity=0.402 Sum_probs=23.8
Q ss_pred eEEEecCCc-Chh-HHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 50 RALDVGSGS-GYL-TTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 50 ~vldiGcG~-G~~-~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+|.-||+|. |.. +..+.+. +...+|+++|.+++.++.++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~ 43 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRS-GFKGKIYGYDINPESISKAV 43 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHT-TCCSEEEEECSCHHHHHHHH
T ss_pred EEEEEecCHHHHHHHHHHHhc-CCCcEEEEEeCCHHHHHHHH
Confidence 577888775 332 2233332 22226999999988776654
No 437
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=69.72 E-value=17 Score=22.94 Aligned_cols=46 Identities=15% Similarity=0.097 Sum_probs=28.6
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCC--CcEEEEEeCCHHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGE--HGKAVGIDHIPDLVNSSVKNVE 93 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~--~~~v~~vD~s~~~~~~a~~~~~ 93 (110)
+++++|-.| |+|.++..+++.+-. ..+|+.++-++...+...+.+.
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~ 50 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQ 50 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHH
Confidence 345777777 456666666665432 2378888888766555544443
No 438
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=68.95 E-value=12 Score=28.42 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=30.8
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHh
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.+|--+|+|+ | .++..++.. +- .|+.+|++++.++.+++.+..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~a-G~--~V~l~D~~~~~l~~~~~~i~~ 361 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFARV-GI--SVVAVESDPKQLDAAKKIITF 361 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT-TC--EEEEECSSHHHHHHHHHHHHH
T ss_pred cEEEEEcccHHHHHHHHHHHhC-CC--chhcccchHhhhhhHHHHHHH
Confidence 5899999998 3 333334433 33 699999999998888776643
No 439
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=68.89 E-value=9.2 Score=25.54 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=30.5
Q ss_pred CCCeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 47 ~~~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
..++|--||+|+ | .++..++ . +. .|+.+|.+++.++.+.+.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-a-G~--~V~v~d~~~~~~~~~~~~ 53 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-S-KH--EVVLQDVSEKALEAAREQ 53 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-T-TS--EEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-c-CC--EEEEEECCHHHHHHHHHH
Confidence 346899999996 4 4555555 4 44 599999999998888766
No 440
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=68.81 E-value=13 Score=27.90 Aligned_cols=57 Identities=11% Similarity=0.191 Sum_probs=36.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCH-----HH---HHHHHHHHHhhcccccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIP-----DL---VNSSVKNVEKSHKALLD 101 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~-----~~---~~~a~~~~~~~~~~~~~ 101 (110)
...+++|+-+|||.|..+..++..+.. ..+|+.++..+ .+ .....+.+...++.++.
T Consensus 525 ~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~l~~~~~~~~~~~~~~~~l~~~GV~i~~ 590 (729)
T 1o94_A 525 KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHELHVEELG 590 (729)
T ss_dssp SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTTHHHHHTTCHHHHHHHHHHTTCEEEC
T ss_pred CCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEecccccccccccccHHHHHHHHHhCCCEEEc
Confidence 446679999999988877666654322 12799998765 01 23445555666766553
No 441
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=68.62 E-value=12 Score=26.26 Aligned_cols=38 Identities=21% Similarity=0.380 Sum_probs=24.0
Q ss_pred eEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 50 RALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 50 ~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
+|.-+|+|. |. ++..+++. +. +|+++|.+++.++..++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~-G~--~V~~~d~~~~~~~~l~~ 41 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSAR-GH--EVIGVDVSSTKIDLINQ 41 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHT-TC--EEEEECSCHHHHHHHHT
T ss_pred EEEEECCCHHHHHHHHHHHHC-CC--EEEEEECCHHHHHHHhC
Confidence 577788774 33 23333333 33 69999999987776543
No 442
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=68.50 E-value=19 Score=23.39 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=28.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~ 92 (110)
.++++|-.|+ +|.++..+++.+-.. .+|+.++-++..++...+.+
T Consensus 17 ~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 62 (303)
T 1yxm_A 17 QGQVAIVTGG-ATGIGKAIVKELLELGSNVVIASRKLERLKSAADEL 62 (303)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 3467888885 466666666554322 27888888876665554444
No 443
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=68.30 E-value=12 Score=24.99 Aligned_cols=34 Identities=24% Similarity=0.185 Sum_probs=24.3
Q ss_pred CCCeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCH
Q psy5585 47 NGKRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 47 ~~~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~ 82 (110)
...+|+-+|||. |. .+..|+.. +- ++++.+|.+.
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-GV-G~i~lvD~D~ 70 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-GI-GKLLLFDYDK 70 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-TC-SEEEEECCCB
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-CC-CEEEEECCCc
Confidence 457999999994 54 34445555 54 6899999876
No 444
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=68.12 E-value=17 Score=23.96 Aligned_cols=40 Identities=20% Similarity=0.193 Sum_probs=28.0
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
.+++|+-+|+|. |......++.++. +|+++|.++...+.+
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~dr~~~~~~~~ 194 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGA--KVKVGARESDLLARI 194 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHH
Confidence 678999999875 5555555555554 799999998654433
No 445
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=68.09 E-value=16 Score=24.08 Aligned_cols=39 Identities=13% Similarity=0.130 Sum_probs=27.5
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
.+++++-+|+|. |......+..++. +|+++|.++...+.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~--~V~~~d~~~~~~~~ 195 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGA--NVKVGARSSAHLAR 195 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTC--EEEEEESSHHHHHH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCC--EEEEEECCHHHHHH
Confidence 578999999875 5555555555544 79999999865443
No 446
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=67.48 E-value=14 Score=23.50 Aligned_cols=45 Identities=13% Similarity=-0.014 Sum_probs=26.6
Q ss_pred CCCCeEEEecCC-cChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHH
Q psy5585 46 ENGKRALDVGSG-SGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 46 ~~~~~vldiGcG-~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~ 90 (110)
.+++++|-.|++ +|.++..+++.+... .+|+.++.++...+.+++
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 58 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITE 58 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHH
Confidence 356788888874 355555555543322 268888877554444433
No 447
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=67.42 E-value=15 Score=26.36 Aligned_cols=38 Identities=21% Similarity=0.121 Sum_probs=29.5
Q ss_pred CCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHH
Q psy5585 46 ENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLV 85 (110)
Q Consensus 46 ~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~ 85 (110)
-.+++++-+|+|. |......++.++. +|+++|.++...
T Consensus 245 L~GKTVgVIG~G~IGr~vA~~lrafGa--~Viv~d~dp~~a 283 (464)
T 3n58_A 245 MAGKVAVVCGYGDVGKGSAQSLAGAGA--RVKVTEVDPICA 283 (464)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHH
T ss_pred ccCCEEEEECcCHHHHHHHHHHHHCCC--EEEEEeCCcchh
Confidence 4778999999996 7666666666665 799999998643
No 448
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=67.30 E-value=17 Score=23.68 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=25.0
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++|.-+|+|. | .++..|++. +. +|+.+|.+++.++..++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~-g~--~V~~~~r~~~~~~~~~~ 44 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQG-GN--DVTLIDQWPAHIEAIRK 44 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC--EEEEECSCHHHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhC-CC--cEEEEECCHHHHHHHHh
Confidence 4788899874 3 222333333 33 69999999887766554
No 449
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=67.28 E-value=14 Score=26.21 Aligned_cols=40 Identities=23% Similarity=0.207 Sum_probs=25.7
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~ 90 (110)
++|.-+|+| +.+..++..+...+ +|+++|.+++.++..++
T Consensus 3 mkI~VIG~G--~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~ 43 (450)
T 3gg2_A 3 LDIAVVGIG--YVGLVSATCFAELGANVRCIDTDRNKIEQLNS 43 (450)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CEEEEECcC--HHHHHHHHHHHhcCCEEEEEECCHHHHHHHHc
Confidence 467788876 44444444332222 69999999988776654
No 450
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=67.15 E-value=19 Score=22.86 Aligned_cols=43 Identities=19% Similarity=0.085 Sum_probs=26.5
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~ 90 (110)
.++++|-.|++ |.++..+++.+-.+ .+|+.++.+++..+...+
T Consensus 7 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 7 EGKSALITGSA-RGIGRAFAEAYVREGATVAIADIDIERARQAAA 50 (259)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45678888855 55555555543322 278889888776555443
No 451
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=66.98 E-value=12 Score=23.34 Aligned_cols=40 Identities=18% Similarity=0.241 Sum_probs=26.8
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNS 87 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~ 87 (110)
.+++||-.|+ +|.++..+++.+-.. .+|++++-++...+.
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~ 60 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPE 60 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHH
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHH
Confidence 5678999885 466666666654332 279999998765543
No 452
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=66.93 E-value=15 Score=23.80 Aligned_cols=47 Identities=23% Similarity=0.229 Sum_probs=30.3
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHh
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNVEK 94 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~ 94 (110)
.++++|--|++ |.++..+++.+-.. .+|+.++.+++.++...+.+..
T Consensus 25 ~gk~~lVTGas-~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~ 72 (271)
T 4ibo_A 25 GGRTALVTGSS-RGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN 72 (271)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 56788888855 44555555544322 2799999998777766655544
No 453
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=66.72 E-value=21 Score=22.71 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=25.4
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~ 92 (110)
++++|-.|++ |.++..+++.+-.. .+|+.++.+++.++.+.+.+
T Consensus 5 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (260)
T 2qq5_A 5 GQVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEA 49 (260)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 4567777754 44555555543222 26888888876655544443
No 454
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=65.65 E-value=18 Score=25.13 Aligned_cols=39 Identities=18% Similarity=0.147 Sum_probs=28.4
Q ss_pred CCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHH
Q psy5585 46 ENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLV 85 (110)
Q Consensus 46 ~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~ 85 (110)
.++.+|+-+|+|. |......+...+. .+|+++|.+++-.
T Consensus 165 l~g~~VlIiGaG~iG~~~a~~l~~~G~-~~V~v~~r~~~ra 204 (404)
T 1gpj_A 165 LHDKTVLVVGAGEMGKTVAKSLVDRGV-RAVLVANRTYERA 204 (404)
T ss_dssp CTTCEEEEESCCHHHHHHHHHHHHHCC-SEEEEECSSHHHH
T ss_pred ccCCEEEEEChHHHHHHHHHHHHHCCC-CEEEEEeCCHHHH
Confidence 3678999999985 6665555555553 3799999998654
No 455
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=65.24 E-value=13 Score=24.84 Aligned_cols=43 Identities=14% Similarity=0.176 Sum_probs=28.8
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-c--EEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-G--KAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~--~v~~vD~s~~~~~~a~~ 90 (110)
.+++||-.| |+|.++..+++.+-.. + +|++++-++.-.....+
T Consensus 20 ~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~ 65 (344)
T 2gn4_A 20 DNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAM 65 (344)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHH
Confidence 457888888 4577777777655332 2 69999998765544433
No 456
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=64.57 E-value=23 Score=22.16 Aligned_cols=42 Identities=14% Similarity=0.206 Sum_probs=26.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~ 89 (110)
.++++|-.|++ |.++..+++.+... .+|+.++-++.-++...
T Consensus 10 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~ 52 (254)
T 2wsb_A 10 DGACAAVTGAG-SGIGLEICRAFAASGARLILIDREAAALDRAA 52 (254)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45678877754 55666666544322 27888888876555443
No 457
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=64.49 E-value=16 Score=22.37 Aligned_cols=34 Identities=9% Similarity=0.120 Sum_probs=24.8
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPD 83 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~ 83 (110)
++||-.| |+|.++..+++.+-.++ +|++++-++.
T Consensus 1 M~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (219)
T 3dqp_A 1 MKIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVE 35 (219)
T ss_dssp CEEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGG
T ss_pred CeEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCcc
Confidence 3577777 46888888888765544 7899888764
No 458
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=63.97 E-value=10 Score=28.71 Aligned_cols=40 Identities=15% Similarity=0.248 Sum_probs=27.4
Q ss_pred eEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 50 RALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 50 ~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
+|--||+|+ | .++..++.. +. .|+.+|.+++.++.++..+
T Consensus 314 kV~VIGaG~MG~~iA~~la~a-G~--~V~l~D~~~~~~~~~~~~i 355 (725)
T 2wtb_A 314 KVAIIGGGLMGSGIATALILS-NY--PVILKEVNEKFLEAGIGRV 355 (725)
T ss_dssp CEEEECCSHHHHHHHHHHHTT-TC--CEEEECSSHHHHHHHHHHH
T ss_pred EEEEEcCCHhhHHHHHHHHhC-CC--EEEEEECCHHHHHHHHHHH
Confidence 588889886 3 344444444 33 5999999999888765543
No 459
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=63.54 E-value=20 Score=23.01 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=23.0
Q ss_pred eEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 50 RALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 50 ~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+|.-+|+|. |. ++..+.+. +. +|+++|.+++.++.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~-g~--~V~~~~~~~~~~~~~~ 40 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR-GH--YLIGVSRQQSTCEKAV 40 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT-TC--EEEEECSCHHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC-CC--EEEEEECCHHHHHHHH
Confidence 577788774 32 22233333 33 6999999988776654
No 460
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=63.50 E-value=21 Score=24.75 Aligned_cols=38 Identities=18% Similarity=0.382 Sum_probs=25.4
Q ss_pred eEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 50 RALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 50 ~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+|.-+|+| +.+..++..+...-+|+++|.+++.++..+
T Consensus 2 kI~VIG~G--~vG~~~A~~La~G~~V~~~d~~~~~~~~l~ 39 (402)
T 1dlj_A 2 KIAVAGSG--YVGLSLGVLLSLQNEVTIVDILPSKVDKIN 39 (402)
T ss_dssp EEEEECCS--HHHHHHHHHHTTTSEEEEECSCHHHHHHHH
T ss_pred EEEEECCC--HHHHHHHHHHhCCCEEEEEECCHHHHHHHH
Confidence 56677764 666666655533127999999988776554
No 461
>3h2z_A Mannitol-1-phosphate 5-dehydrogenase; PSI- protein structure initiative, structural genomics, midwest for structural genomics (MCSG); 1.90A {Shigella flexneri 2a str}
Probab=62.86 E-value=15 Score=25.64 Aligned_cols=40 Identities=20% Similarity=0.280 Sum_probs=31.3
Q ss_pred CeEEEecCCc---ChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 49 KRALDVGSGS---GYLTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 49 ~~vldiGcG~---G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
++++-+|+|. |+++..+.+. +- +|+.+|.++..++..++.
T Consensus 1 mkavhfGaGniGRGfig~~l~~~-g~--~v~f~dv~~~~i~~Ln~~ 43 (382)
T 3h2z_A 1 MKALHFGAGNIGRGFIGKLLADA-GI--QLTFADVNQVVLDALNAR 43 (382)
T ss_dssp CEEEEECCSHHHHHTHHHHHHHT-TC--EEEEEESCHHHHHHHHHH
T ss_pred CcEEEECCCccchhhHHHHHHHc-CC--eEEEEeCCHHHHHHHhcC
Confidence 4688999996 6776666665 33 699999999998888764
No 462
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=62.69 E-value=29 Score=23.82 Aligned_cols=45 Identities=16% Similarity=0.194 Sum_probs=31.7
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCc--EEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHG--KAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~--~v~~vD~s~~~~~~a~~~~ 92 (110)
.+++||-.|. +|.++..+++.+-..+ +|++++.++..+....+.+
T Consensus 34 ~~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l 80 (399)
T 3nzo_A 34 SQSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDI 80 (399)
T ss_dssp HTCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHH
T ss_pred CCCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHH
Confidence 4578998885 4777777777654433 7999999987765554443
No 463
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=62.64 E-value=7 Score=26.18 Aligned_cols=39 Identities=8% Similarity=-0.158 Sum_probs=28.6
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
...++-+|+ |..+..+++.+...+.|+.+|.+++.++ .+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~ 153 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VL 153 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HH
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HH
Confidence 346887776 6777888887654445999999998887 54
No 464
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=62.49 E-value=22 Score=25.30 Aligned_cols=40 Identities=23% Similarity=0.159 Sum_probs=29.5
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
.+++|.-+|.|. |......++.++. +|+++|.++.....+
T Consensus 210 ~GktVgIiG~G~IG~~vA~~Lka~Ga--~Viv~D~~p~~a~~A 250 (436)
T 3h9u_A 210 AGKTACVCGYGDVGKGCAAALRGFGA--RVVVTEVDPINALQA 250 (436)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCC--EEEEECCChhhhHHH
Confidence 578999999886 6666666666655 799999998654433
No 465
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=62.38 E-value=16 Score=24.59 Aligned_cols=36 Identities=17% Similarity=0.181 Sum_probs=26.0
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCC
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHI 81 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s 81 (110)
+.++.+||-+|+ | .|..++.+++..+. ..+..++.+
T Consensus 165 ~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~ 202 (357)
T 1zsy_A 165 LQPGDSVIQNASNSGVGQAVIQIAAALGL-RTINVVRDR 202 (357)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEECCC
T ss_pred cCCCCEEEEeCCcCHHHHHHHHHHHHcCC-EEEEEecCc
Confidence 567889999997 4 48999999998765 234445544
No 466
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=61.90 E-value=0.98 Score=38.70 Aligned_cols=52 Identities=15% Similarity=0.273 Sum_probs=0.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCC----CcEEEEEeCCHHHHHHHHHHHHhhccc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGE----HGKAVGIDHIPDLVNSSVKNVEKSHKA 98 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~ 98 (110)
+..+|||+|.|+|..+..+...... ...++..|+|+...+.++++++...++
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~di~ 1295 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLHVT 1295 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHTEE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcccc
No 467
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=61.68 E-value=28 Score=24.03 Aligned_cols=39 Identities=21% Similarity=0.055 Sum_probs=26.9
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
.+++|+-+|+|. |......+...+. +|+..|.+++.++.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~Ga--kVvv~D~~~~~l~~ 211 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGA--KLVVTDVNKAAVSA 211 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHH
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCC--EEEEEcCCHHHHHH
Confidence 678999999875 5444444444444 79999999876553
No 468
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=61.30 E-value=32 Score=22.98 Aligned_cols=39 Identities=21% Similarity=0.141 Sum_probs=24.1
Q ss_pred eEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 50 RALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 50 ~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+|.-+|+|. |. ++..++.. +...+|+.+|.+++.++...
T Consensus 2 kI~VIGaG~~G~~la~~l~~~-g~~~~V~l~D~~~~~~~~~~ 42 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMK-GFAREMVLIDVDKKRAEGDA 42 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCSEEEEECSSHHHHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhC-CCCCeEEEEeCChHHHHHHH
Confidence 577889875 32 33333333 22236999999987766543
No 469
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=61.20 E-value=27 Score=22.79 Aligned_cols=39 Identities=23% Similarity=0.237 Sum_probs=25.6
Q ss_pred CeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
++|.-||+|. |. ++..+++. +. +|+++|.+++.++...+
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~-G~--~V~~~d~~~~~~~~~~~ 44 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKA-GY--LLNVFDLVQSAVDGLVA 44 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TC--EEEEECSSHHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHhC-CC--eEEEEcCCHHHHHHHHH
Confidence 4688888885 33 33334444 33 69999999887766543
No 470
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=61.17 E-value=15 Score=25.03 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=25.8
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
++|.-||+|. | .++..+.+. +. +|+++|.+++.++.+.
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~-G~--~V~~~dr~~~~~~~a~ 48 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAA-NH--SVFGYNRSRSGAKSAV 48 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHT-TC--CEEEECSCHHHHHHHH
T ss_pred CEEEEEeecHHHHHHHHHHHHC-CC--EEEEEeCCHHHHHHHH
Confidence 5788888875 3 344444444 33 5999999998777664
No 471
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=61.09 E-value=9.8 Score=28.69 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=28.4
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~ 92 (110)
++|--||+|+ | .++..+++. +. .|+.+|.+++.++.+...+
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~a-G~--~V~l~D~~~~~~~~~~~~i 357 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASK-GT--PILMKDINEHGIEQGLAEA 357 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHT-TC--CEEEECSSHHHHHHHHHHH
T ss_pred CEEEEECCChhhHHHHHHHHhC-CC--EEEEEECCHHHHHHHHHHH
Confidence 4688999986 3 444555555 33 4999999998887764433
No 472
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=60.77 E-value=25 Score=23.40 Aligned_cols=40 Identities=20% Similarity=0.282 Sum_probs=26.0
Q ss_pred CeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHHH
Q psy5585 49 KRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 49 ~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~ 91 (110)
++|.-+|+|. |. ++..+++. +. +|+.+|.+++.++..++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~-g~--~V~~~~r~~~~~~~~~~~ 46 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALK-GQ--SVLAWDIDAQRIKEIQDR 46 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT-TC--EEEEECSCHHHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhC-CC--EEEEEeCCHHHHHHHHhc
Confidence 5799999875 32 22333333 33 699999998877666543
No 473
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=60.53 E-value=22 Score=20.44 Aligned_cols=39 Identities=26% Similarity=0.273 Sum_probs=27.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNS 87 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~ 87 (110)
.+.+|+-+|+| ..+..++..+...+ +|+.+|.+++..+.
T Consensus 20 ~~~~v~iiG~G--~iG~~~a~~l~~~g~~v~v~~r~~~~~~~ 59 (144)
T 3oj0_A 20 GGNKILLVGNG--MLASEIAPYFSYPQYKVTVAGRNIDHVRA 59 (144)
T ss_dssp CCCEEEEECCS--HHHHHHGGGCCTTTCEEEEEESCHHHHHH
T ss_pred cCCEEEEECCC--HHHHHHHHHHHhCCCEEEEEcCCHHHHHH
Confidence 47799999985 66666666543322 59999999876654
No 474
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=60.32 E-value=29 Score=21.91 Aligned_cols=45 Identities=22% Similarity=0.271 Sum_probs=26.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCc-EEEEEeC-CHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHG-KAVGIDH-IPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~-s~~~~~~a~~~~ 92 (110)
+++++|-.|+ +|.++..+++.+..++ +|+.++- ++...+...+.+
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l 66 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL 66 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHH
Confidence 4567887775 4666666666543322 6888877 665554443333
No 475
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=60.29 E-value=9.1 Score=25.01 Aligned_cols=39 Identities=10% Similarity=0.054 Sum_probs=30.0
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
+++..+.+|+-+|.|...+.+ .+ . ++.-|++++.+..-+
T Consensus 22 lP~~~~yvEpF~GggaV~~~~----~~-~-~viNDin~~li~~~~ 60 (259)
T 1yf3_A 22 FPKYNRFVDLFCGGLSVSLNV----NG-P-VLANDIQEPIIEMYK 60 (259)
T ss_dssp CCCCSEEEETTCTTCTTGGGS----CS-S-EEEECSCHHHHHHHH
T ss_pred CcccCeEEEecCCccHHHHhc----cc-c-EEEecCChHHHHHHH
Confidence 344679999999999987653 23 3 899999998877654
No 476
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=60.29 E-value=25 Score=22.87 Aligned_cols=49 Identities=27% Similarity=0.300 Sum_probs=33.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHHHhhc
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNVEKSH 96 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~ 96 (110)
+++++|--|.+.| ++.++++.+... .+|+.+|.+++.++.+.+.+...+
T Consensus 8 ~gKvalVTGas~G-IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g 57 (255)
T 4g81_D 8 TGKTALVTGSARG-LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKG 57 (255)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC
Confidence 5678888786655 444444443332 379999999988887777666554
No 477
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=60.08 E-value=28 Score=22.14 Aligned_cols=42 Identities=21% Similarity=0.105 Sum_probs=25.3
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~ 89 (110)
.++++|-.|++ |.++..+++.+-.. .+|+.++.+++..+.+.
T Consensus 6 ~~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~ 48 (267)
T 2gdz_A 6 NGKVALVTGAA-QGIGRAFAEALLLKGAKVALVDWNLEAGVQCK 48 (267)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CCCEEEEECCC-CcHHHHHHHHHHHCCCEEEEEECCHHHHHHHH
Confidence 34678888854 55555555543222 26888888876554443
No 478
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=59.39 E-value=21 Score=23.50 Aligned_cols=38 Identities=21% Similarity=0.159 Sum_probs=23.8
Q ss_pred CCeEEEecCCc-ChhH-HHHHHHhCCCcEEEEEeCCHHHHH
Q psy5585 48 GKRALDVGSGS-GYLT-TCMALMMGEHGKAVGIDHIPDLVN 86 (110)
Q Consensus 48 ~~~vldiGcG~-G~~~-~~l~~~~~~~~~v~~vD~s~~~~~ 86 (110)
.++|.-+|+|. |... ..++.. +.-.+|+.+|.+++.++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~-g~~~~V~l~d~~~~~~~ 46 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQR-GIAREIVLEDIAKERVE 46 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TCCSEEEEECSSHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCCCEEEEEeCChhHHH
Confidence 46899999975 3332 223332 22226999999986654
No 479
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=59.33 E-value=4.2 Score=28.90 Aligned_cols=40 Identities=18% Similarity=0.299 Sum_probs=25.0
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~~ 90 (110)
.++--+|.| +.+..++..+...+ +|+++|.+++-++..++
T Consensus 9 ~~~~vIGlG--~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 9 VRIAMIGTG--YVGLVSGACFSDFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCSTTHHHHTT
T ss_pred eEEEEEcCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhc
Confidence 467777776 44444444332222 69999999987776543
No 480
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=59.09 E-value=24 Score=20.46 Aligned_cols=39 Identities=13% Similarity=0.175 Sum_probs=22.9
Q ss_pred CCeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCC-HHHHHHH
Q psy5585 48 GKRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHI-PDLVNSS 88 (110)
Q Consensus 48 ~~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s-~~~~~~a 88 (110)
..+++-+|+ |..+..+++.+... -+|+.+|.+ ++.++..
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~ 43 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQL 43 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHH
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHH
Confidence 346777876 55555555543221 269999997 4544333
No 481
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=58.92 E-value=12 Score=26.58 Aligned_cols=42 Identities=12% Similarity=0.178 Sum_probs=26.9
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.-++|--+|+|. .+..++..+...-+|+++|.+++.++..++
T Consensus 35 ~~mkIaVIGlG~--mG~~lA~~La~G~~V~~~D~~~~~v~~l~~ 76 (432)
T 3pid_A 35 EFMKITISGTGY--VGLSNGVLIAQNHEVVALDIVQAKVDMLNQ 76 (432)
T ss_dssp CCCEEEEECCSH--HHHHHHHHHHTTSEEEEECSCHHHHHHHHT
T ss_pred CCCEEEEECcCH--HHHHHHHHHHcCCeEEEEecCHHHhhHHhc
Confidence 335788888764 444444333221269999999998877654
No 482
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=58.88 E-value=35 Score=22.25 Aligned_cols=42 Identities=21% Similarity=0.361 Sum_probs=28.0
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVNSSV 89 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~~a~ 89 (110)
++++||-.|+ +|.++..+++.+-..+ +|++++-++.-.+...
T Consensus 10 ~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 52 (342)
T 1y1p_A 10 EGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHH
Confidence 5678998885 4777777766543222 7999998876554433
No 483
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=58.71 E-value=23 Score=22.56 Aligned_cols=36 Identities=22% Similarity=0.520 Sum_probs=27.5
Q ss_pred CeEEEecCCcChhHHHHHHHhCCCc-EEEEEeCCHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEHG-KAVGIDHIPDLVN 86 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~~-~v~~vD~s~~~~~ 86 (110)
++||-.|+ |.++..+++.+-.++ +|++++-++.-..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 42 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQME 42 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHH
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhh
Confidence 58999994 899888888764433 7999998876443
No 484
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=58.08 E-value=29 Score=25.13 Aligned_cols=40 Identities=20% Similarity=0.153 Sum_probs=26.9
Q ss_pred CCCCeEEEecCCcChhHHHHHH---HhCCCcEEEEEeCCHHHHHHHH
Q psy5585 46 ENGKRALDVGSGSGYLTTCMAL---MMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 46 ~~~~~vldiGcG~G~~~~~l~~---~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
..+++++-+|+| .++..+++ ..+. +|+.+|.++.....+.
T Consensus 263 L~GKtVvVtGaG--gIG~aiA~~Laa~GA--~Viv~D~~~~~a~~Aa 305 (488)
T 3ond_A 263 IAGKVAVVAGYG--DVGKGCAAALKQAGA--RVIVTEIDPICALQAT 305 (488)
T ss_dssp CTTCEEEEECCS--HHHHHHHHHHHHTTC--EEEEECSCHHHHHHHH
T ss_pred ccCCEEEEECCC--HHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHH
Confidence 367899999988 34444444 3333 7999999987655443
No 485
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=58.01 E-value=22 Score=23.61 Aligned_cols=37 Identities=22% Similarity=0.253 Sum_probs=22.2
Q ss_pred eEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHH
Q psy5585 50 RALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVN 86 (110)
Q Consensus 50 ~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~ 86 (110)
+|.-+|+|. |..........+.-.+|+.+|++++.++
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~~~~~ 39 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDEDRAQ 39 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCHHHHH
Confidence 678889875 3322222222222236999999987554
No 486
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=57.83 E-value=13 Score=25.84 Aligned_cols=33 Identities=24% Similarity=0.300 Sum_probs=24.0
Q ss_pred CeEEEecCCcChhHHH--HHHHhCCCcEEEEEeCCH
Q psy5585 49 KRALDVGSGSGYLTTC--MALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~--l~~~~~~~~~v~~vD~s~ 82 (110)
++|+-||.|.|.++.+ |++. +++.+|+.+|.++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~-~~~~~VtlI~~~~ 37 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNL-MPDLKITLISDRP 37 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHH-CTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHhcc-CcCCeEEEEcCCC
Confidence 4799999998755443 4444 4567899999876
No 487
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=57.70 E-value=12 Score=25.09 Aligned_cols=41 Identities=15% Similarity=0.122 Sum_probs=28.1
Q ss_pred cCCCCeEEEecC-C-cChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 45 LENGKRALDVGS-G-SGYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 45 ~~~~~~vldiGc-G-~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
+.++.+||-.|+ | .|..+..+++..+ ..+|++++ ++.-.+.
T Consensus 140 ~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~ 182 (349)
T 4a27_A 140 LREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEA 182 (349)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHH
Confidence 457889999998 4 3777777877653 24788887 4443333
No 488
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=57.26 E-value=32 Score=21.41 Aligned_cols=40 Identities=10% Similarity=0.134 Sum_probs=23.0
Q ss_pred CeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~ 89 (110)
+++|-.|++ |.++..+++.+-.. .+|+.++.++.-++...
T Consensus 3 k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~ 43 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETA 43 (250)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 456777754 55555555543222 26888888776554443
No 489
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=57.03 E-value=36 Score=22.02 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=24.6
Q ss_pred CeEEEecCCc-Chh-HHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 49 KRALDVGSGS-GYL-TTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 49 ~~vldiGcG~-G~~-~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
++|.-+|+|. |.. +..+++. +. +|+.+|.+++..+...
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~-g~--~V~~~~~~~~~~~~~~ 45 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKA-GY--SLVVSDRNPEAIADVI 45 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHT-TC--EEEEECSCHHHHHHHH
T ss_pred ceEEEECchHHHHHHHHHHHhC-CC--EEEEEeCCHHHHHHHH
Confidence 4788999885 433 2333333 33 6999999988766554
No 490
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=56.63 E-value=30 Score=25.72 Aligned_cols=58 Identities=16% Similarity=0.171 Sum_probs=36.7
Q ss_pred cCCCCeEEEecCCcChhHHHHHHHhCC-CcEEEEEeCCHHH---------HHHHHHHHHhhccccccc
Q psy5585 45 LENGKRALDVGSGSGYLTTCMALMMGE-HGKAVGIDHIPDL---------VNSSVKNVEKSHKALLDS 102 (110)
Q Consensus 45 ~~~~~~vldiGcG~G~~~~~l~~~~~~-~~~v~~vD~s~~~---------~~~a~~~~~~~~~~~~~~ 102 (110)
...+.+|+-+|+|.|..+..++..+.. ..+|+.++..+.. .....+.+...+++++..
T Consensus 520 ~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~~~~~~~~l~~~l~~~GV~i~~~ 587 (690)
T 3k30_A 520 LPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTNNTFEVNRIQRRLIENGVARVTD 587 (690)
T ss_dssp CCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGGGGTCHHHHHHHHHHTTCEEEES
T ss_pred CCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccccchhHHHHHHHHHHCCCEEEcC
Confidence 456678999998888776665554322 2268888876432 344456666777766543
No 491
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=56.15 E-value=35 Score=22.08 Aligned_cols=40 Identities=23% Similarity=0.180 Sum_probs=25.8
Q ss_pred CeEEEecCCc-C-hhHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 49 KRALDVGSGS-G-YLTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 49 ~~vldiGcG~-G-~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
++|.-||+|. | .++..+++. +...+|+++|.+++.++.+.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~-g~~~~V~~~d~~~~~~~~~~ 48 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRD-HPHYKIVGYNRSDRSRDIAL 48 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHH-CTTSEEEEECSSHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhC-CCCcEEEEEcCCHHHHHHHH
Confidence 5788899885 3 333344443 22236999999988776654
No 492
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=56.12 E-value=34 Score=21.39 Aligned_cols=41 Identities=12% Similarity=0.134 Sum_probs=28.2
Q ss_pred CCCeEEEecCCcChhHHHHHHHhCCCcEEEEEeCCHHHHHHH
Q psy5585 47 NGKRALDVGSGSGYLTTCMALMMGEHGKAVGIDHIPDLVNSS 88 (110)
Q Consensus 47 ~~~~vldiGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a 88 (110)
.++++|-.|++ |.++..+++.+....+|+.++-++..++..
T Consensus 4 ~~k~vlITGas-~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~ 44 (245)
T 3e9n_A 4 KKKIAVVTGAT-GGMGIEIVKDLSRDHIVYALGRNPEHLAAL 44 (245)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHTTTSEEEEEESCHHHHHHH
T ss_pred CCCEEEEEcCC-CHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 34678888865 566777777765555899999988766544
No 493
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=55.97 E-value=18 Score=24.87 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=23.3
Q ss_pred CCCeEEEecCCc-ChhH-HHHHHHhCCCcEEEEEeCCH
Q psy5585 47 NGKRALDVGSGS-GYLT-TCMALMMGEHGKAVGIDHIP 82 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~-~~l~~~~~~~~~v~~vD~s~ 82 (110)
...+|+-+|||. |.-. ..|+.. |- ++++.+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~a-GV-g~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAW-GV-RKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHT-TC-CEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHHc-CC-CEEEEecCCE
Confidence 457899999995 5443 344444 55 6899998864
No 494
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=55.82 E-value=40 Score=21.99 Aligned_cols=46 Identities=17% Similarity=0.064 Sum_probs=26.3
Q ss_pred CCCeEEEecCCcC-hhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGSG-YLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~G-~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~ 92 (110)
.++++|-.|.+.| .++..+++.+... .+|+.++.++...+.+.+..
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 77 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLA 77 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 5678999997633 2334443332221 26899988876555444433
No 495
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=55.55 E-value=33 Score=22.49 Aligned_cols=40 Identities=23% Similarity=0.182 Sum_probs=25.8
Q ss_pred CCeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHHH
Q psy5585 48 GKRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSVK 90 (110)
Q Consensus 48 ~~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~ 90 (110)
.++|.-||+|. |. ++..+++. +. +|+++|.+++.++...+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~-G~--~V~~~dr~~~~~~~~~~ 48 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRA-GL--STWGADLNPQACANLLA 48 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHT-TC--EEEEECSCHHHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHC-CC--eEEEEECCHHHHHHHHH
Confidence 35788888874 32 33333333 33 69999999987776553
No 496
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=55.49 E-value=30 Score=23.40 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=25.0
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
+..+|.-+|+|. |..........+.-.+++.+|++++.++.
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g 45 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNKEKAMG 45 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecchHHHHH
Confidence 456899999864 33333222222322379999999876554
No 497
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=55.38 E-value=33 Score=22.37 Aligned_cols=46 Identities=11% Similarity=0.034 Sum_probs=26.5
Q ss_pred CCCeEEEecCCc-ChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKNV 92 (110)
Q Consensus 47 ~~~~vldiGcG~-G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~~ 92 (110)
.++++|-.|.+. ..++..+++.+-.. .+|+.++.++...+.+.+..
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~ 76 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLA 76 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH
Confidence 456888888753 24444444433222 26999998876544444433
No 498
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=55.22 E-value=19 Score=25.93 Aligned_cols=41 Identities=12% Similarity=-0.027 Sum_probs=28.4
Q ss_pred CeEEEecCCcChhHHHHHHHhCCC-cEEEEEeCCHHHHHHHHHH
Q psy5585 49 KRALDVGSGSGYLTTCMALMMGEH-GKAVGIDHIPDLVNSSVKN 91 (110)
Q Consensus 49 ~~vldiGcG~G~~~~~l~~~~~~~-~~v~~vD~s~~~~~~a~~~ 91 (110)
..++-+|+| ..+..+++.+... -.|+.+|.+++.++.++..
T Consensus 128 ~hviI~G~g--~~g~~la~~L~~~~~~vvvid~~~~~~~~~~~~ 169 (565)
T 4gx0_A 128 GHILIFGID--PITRTLIRKLESRNHLFVVVTDNYDQALHLEEQ 169 (565)
T ss_dssp SCEEEESCC--HHHHHHHHHTTTTTCCEEEEESCHHHHHHHHHS
T ss_pred CeEEEECCC--hHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh
Confidence 357776665 6666777655432 3699999999988777643
No 499
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=55.16 E-value=32 Score=23.34 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=25.7
Q ss_pred CCCCeEEEecCCc-ChhHHHHHHHhCCCcEEEEEeCCHHHHHH
Q psy5585 46 ENGKRALDVGSGS-GYLTTCMALMMGEHGKAVGIDHIPDLVNS 87 (110)
Q Consensus 46 ~~~~~vldiGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~ 87 (110)
+...+|.-+|+|. |..........+.-.+++.+|++++.++-
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g 49 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKG 49 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHH
Confidence 4557899999864 43333222222332379999999876553
No 500
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=54.82 E-value=35 Score=22.66 Aligned_cols=40 Identities=18% Similarity=0.227 Sum_probs=26.2
Q ss_pred CCCeEEEecCCc-Ch-hHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Q psy5585 47 NGKRALDVGSGS-GY-LTTCMALMMGEHGKAVGIDHIPDLVNSSV 89 (110)
Q Consensus 47 ~~~~vldiGcG~-G~-~~~~l~~~~~~~~~v~~vD~s~~~~~~a~ 89 (110)
..++|.-||+|. |. ++..+++. +. +|+++|.+++.++...
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~-G~--~V~~~dr~~~~~~~l~ 71 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEA-GY--ALQVWNRTPARAASLA 71 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHT-TC--EEEEECSCHHHHHHHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhC-CC--eEEEEcCCHHHHHHHH
Confidence 346899999885 43 33334443 33 6999999988766543
Done!