BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5587
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG+I PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 223
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 22 RLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLIIPVGPEGSAQNLEQI 81
RL++ G G A+ ++ P LIDQL+PGGRLI+PVGP G Q LEQ
Sbjct: 137 RLVVGDGRMGYAEEAPYDAIHVGAAAPVVP-QALIDQLKPGGRLILPVGPAGGNQMLEQY 195
Query: 82 DKNLDGTITRTPLMQVVYVPLTDKQHQW 109
DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 196 DKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
L+DQL+PGGRLI+PVGP G Q LEQ DK DG+ PLM V+YVPLTDK QW
Sbjct: 169 LLDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSTKMKPLMGVIYVPLTDKDKQW 223
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 54 QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
+LI+QL GGRLI+PVGP+G +Q ++Q DK+ +G + T LM V+YVPLTD
Sbjct: 173 ELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%)
Query: 11 SKLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQLI 56
++LI+QL GGRLI+PVGP+G +Q ++Q DK+ +G + T LM ++
Sbjct: 172 TELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVM 217
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
LIDQL+PGGRL+IPVG Q+L+ +DKN DG+++ V YVPLT ++ Q G
Sbjct: 175 LIDQLKPGGRLVIPVG--NIFQDLQVVDKNSDGSVSIKDETSVRYVPLTSREAQLRG 229
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTIT 48
LIDQL+PGGRL+IPVG Q L+ +DKN DG+++
Sbjct: 175 LIDQLKPGGRLVIPVG--NIFQDLQVVDKNSDGSVS 208
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 54 QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQ 108
+LIDQL+ GGR+++PVG L +DKN DG ++ L V +VPLT K++Q
Sbjct: 214 ELIDQLKNGGRIVMPVGKSNDFHELMVVDKNEDGIVSIKSLGVVRFVPLTSKENQ 268
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTIT--------RTPLMQLIDQLRPGG 63
+LIDQL+ GGR+++PVG L +DKN DG ++ PL +QL P
Sbjct: 214 ELIDQLKNGGRIVMPVGKSNDFHELMVVDKNEDGIVSIKSLGVVRFVPLTSKENQLNPKN 273
Query: 64 R 64
+
Sbjct: 274 K 274
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQ 108
L++QL+PGGR++IPVG +Q+L+ IDK+ DG+ + V YVPLT + Q
Sbjct: 175 LLEQLKPGGRMVIPVGT--YSQDLQVIDKSADGSTSVRNDASVRYVPLTSRSAQ 226
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTIT 48
L++QL+PGGR++IPVG +Q L+ IDK+ DG+ +
Sbjct: 175 LLEQLKPGGRMVIPVGT--YSQDLQVIDKSADGSTS 208
>sp|Q123X2|PIMT2_POLSJ Protein-L-isoaspartate O-methyltransferase 2 OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=pcm2 PE=3 SV=1
Length = 211
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 106
LI QL+ GGR++IPVG Q L ++KN DGT++ ++ V +VPLT ++
Sbjct: 160 LIRQLKAGGRMVIPVGAAFMVQQLMLVEKNRDGTVSTRQILPVAFVPLTGQR 211
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTIT 48
LI QL+ GGR++IPVG Q L ++KN DGT++
Sbjct: 160 LIRQLKAGGRMVIPVGAAFMVQQLMLVEKNRDGTVS 195
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
L DQL GGR++IPV Q QIDK ++G I + + V+YVPLT ++ QW
Sbjct: 169 LTDQLAEGGRMMIPVEQVDGNQVFMQIDK-INGKIEQKIVEHVIYVPLTSREEQW 222
>sp|Q0KB67|PIMT1_CUPNH Protein-L-isoaspartate O-methyltransferase 1 OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=pcm1 PE=3 SV=1
Length = 259
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 106
LI QL+PGGR++IPVG + Q L ++K+ DGT++ ++ V +VPL K
Sbjct: 208 LIRQLKPGGRMVIPVGAQFLTQYLLLVEKSEDGTVSTRQILPVRFVPLVGKH 259
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTIT 48
LI QL+PGGR++IPVG + Q L ++K+ DGT++
Sbjct: 208 LIRQLKPGGRMVIPVGAQFLTQYLLLVEKSEDGTVS 243
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Query: 9 NQSKLIDQLRPGGRLIIPVGP--EGSAQSLEQIDKNLDGTITRTPLMQLIDQLRPGGRLI 66
N +++ ++ RL I VG G+++ E+ D G +L+DQL+ G+++
Sbjct: 128 NHDEVLMEMYKEKRLQINVGDGRMGTSED-EKFDAIHVGASASELPQKLVDQLKSPGKIL 186
Query: 67 IPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
IP+G +QN+ I+KN G I++ L V YVPLTD
Sbjct: 187 IPIGT--YSQNIYLIEKNEQGKISKRTLFPVRYVPLTD 222
>sp|Q88MF0|PIMT_PSEPK Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain KT2440) GN=pcm PE=3 SV=2
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGR++IPVGP G AQ L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPLLN 208
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L+DQL PGGR++IPVGP G AQ L I + G R
Sbjct: 159 ALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHGFSRRV 197
>sp|B0KSC8|PIMT_PSEPG Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain GB-1) GN=pcm PE=3 SV=2
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGR++IPVGP G AQ L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPLLN 208
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L+DQL PGGR++IPVGP G AQ L I + G R
Sbjct: 159 ALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHGFSRRV 197
>sp|A5W820|PIMT_PSEP1 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=pcm PE=3 SV=2
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGR++IPVGP G AQ L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPLLN 208
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L+DQL PGGR++IPVGP G AQ L I + G R
Sbjct: 159 ALLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHGFSRRV 197
>sp|Q1D6W9|PIMT_MYXXD Protein-L-isoaspartate O-methyltransferase OS=Myxococcus xanthus
(strain DK 1622) GN=pcm PE=3 SV=1
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 53 MQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLD-GTITRT-PLMQVVYVPLT 103
+QL+ QL+PGGR+IIPVGP G Q L +I + L G + + L+ V +VP+T
Sbjct: 153 LQLLSQLKPGGRMIIPVGPRGGTQQLLRIQRALRPGEVPQVESLLSVRFVPMT 205
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNL 43
+L+ QL+PGGR+IIPVGP G Q L +I + L
Sbjct: 154 QLLSQLKPGGRMIIPVGPRGGTQQLLRIQRAL 185
>sp|B4SR93|PIMT_STRM5 Protein-L-isoaspartate O-methyltransferase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=pcm PE=3 SV=1
Length = 225
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
LI+QL GGRL+ PVG SAQ+L Q+D+ DG+I + L V +VPL
Sbjct: 173 LIEQLAEGGRLVAPVGGP-SAQSLVQLDRRADGSIEQHVLAPVTFVPL 219
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
LI+QL GGRL+ PVG SAQSL Q+D+ DG+I
Sbjct: 173 LIEQLAEGGRLVAPVGGP-SAQSLVQLDRRADGSI 206
>sp|Q5GYL2|PIMT_XANOR Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain KACC10331 / KXO85) GN=pcm PE=3 SV=1
Length = 225
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DGTI + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTIEQQVLAPVTFVPL 219
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
L+DQL GGRL+ PVG S+QSL Q+ + DGTI
Sbjct: 172 ALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTI 206
>sp|B2SUB3|PIMT_XANOP Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain PXO99A) GN=pcm PE=3 SV=1
Length = 225
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DGTI + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTIEQQVLAPVTFVPL 219
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
L+DQL GGRL+ PVG S+QSL Q+ + DGTI
Sbjct: 172 ALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTI 206
>sp|Q2P1L5|PIMT_XANOM Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=pcm PE=3 SV=1
Length = 225
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DGTI + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTIEQQVLAPVTFVPL 219
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
L+DQL GGRL+ PVG S+QSL Q+ + DGTI
Sbjct: 172 ALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTI 206
>sp|A7HC32|PIMT1_ANADF Protein-L-isoaspartate O-methyltransferase 1 OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=pcm1 PE=3 SV=1
Length = 212
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLT 103
L QL PGGR+++PVG Q L +DK DG T L+ V +VPLT
Sbjct: 160 LTAQLAPGGRMVVPVGAAPGLQVLRAVDKGNDGVDLSTDLIPVRFVPLT 208
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLM 53
L QL PGGR+++PVG Q L +DK DG T L+
Sbjct: 159 ALTAQLAPGGRMVVPVGAAPGLQVLRAVDKGNDGVDLSTDLI 200
>sp|Q1I655|PIMT_PSEE4 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas
entomophila (strain L48) GN=pcm PE=3 SV=2
Length = 212
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGR++IPVGP G Q L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGETQQLMLIVREEQG-FSRRVLGAVRFVPLLN 208
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L+DQL PGGR++IPVGP G Q L I + G R
Sbjct: 160 LLDQLAPGGRMVIPVGPAGETQQLMLIVREEQGFSRRV 197
>sp|B1JB29|PIMT_PSEPW Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain W619) GN=pcm PE=3 SV=2
Length = 212
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGR++IPVGP G Q L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEVQQLMLIVREEQG-FSRRVLGAVRFVPLLN 208
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 23/39 (58%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L+DQL PGGR++IPVGP G Q L I + G R
Sbjct: 159 ALLDQLAPGGRMVIPVGPAGEVQQLMLIVREEQGFSRRV 197
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
L++QL+PGG+LIIPVG Q L ++ K DG+I V +VPL +H W
Sbjct: 165 LVEQLKPGGKLIIPVGSYHLWQELLEVIKREDGSIKIKNHGGVAFVPLIG-EHGW 218
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
L++QL+PGG+LIIPVG Q L ++ K DG+I
Sbjct: 165 LVEQLKPGGKLIIPVGSYHLWQELLEVIKREDGSI 199
>sp|A0LM89|PIMT2_SYNFM Protein-L-isoaspartate O-methyltransferase 2 OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=pcm2 PE=3 SV=1
Length = 247
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLT 103
L+DQL+PGGR+IIPVG Q L ++K+ G ++ V +VPLT
Sbjct: 196 LLDQLKPGGRMIIPVGGPFFVQQLMLVEKDEQGRTRTRQILPVAFVPLT 244
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L+DQL+PGGR+IIPVG Q L ++K+ G TRT
Sbjct: 196 LLDQLKPGGRMIIPVGGPFFVQQLMLVEKDEQGR-TRT 232
>sp|B3E6I4|PIMT_GEOLS Protein-L-isoaspartate O-methyltransferase OS=Geobacter lovleyi
(strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pcm PE=3 SV=1
Length = 217
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 106
L QL PGGRL+IPVG E S Q L +I K DGT+T+ + +VPL +Q
Sbjct: 161 LAAQLAPGGRLVIPVGDE-SNQTLLRIRKAADGTLTQETGIGCRFVPLIGQQ 211
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITR 49
L QL PGGRL+IPVG E S Q+L +I K DGT+T+
Sbjct: 161 LAAQLAPGGRLVIPVGDE-SNQTLLRIRKAADGTLTQ 196
>sp|Q8PLR3|PIMT_XANAC Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=pcm PE=3 SV=1
Length = 225
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
LIDQL GGRL+ PVG S+Q+L Q+ + DG I + L V +VPL
Sbjct: 173 LIDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGAIEQQVLAPVTFVPL 219
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
LIDQL GGRL+ PVG S+QSL Q+ + DG I
Sbjct: 172 ALIDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGAI 206
>sp|B2FK95|PIMT_STRMK Protein-L-isoaspartate O-methyltransferase OS=Stenotrophomonas
maltophilia (strain K279a) GN=pcm PE=3 SV=1
Length = 225
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 54 QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
+L+ QL GGRL+ PVG G Q+L Q+D+ DG+I + L V +VPL
Sbjct: 172 ELVGQLAEGGRLVAPVGGPGG-QSLVQLDRRADGSIEQRVLAPVTFVPL 219
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
+L+ QL GGRL+ PVG G QSL Q+D+ DG+I
Sbjct: 172 ELVGQLAEGGRLVAPVGGPGG-QSLVQLDRRADGSI 206
>sp|Q8P9Y6|PIMT_XANCP Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=pcm PE=3 SV=1
Length = 225
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DG I + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVLAPVTFVPL 219
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
L+DQL GGRL+ PVG S+QSL Q+ + DG I + L
Sbjct: 172 ALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVL 211
>sp|B0RTZ8|PIMT_XANCB Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain B100) GN=pcm PE=3 SV=1
Length = 225
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DG I + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVLAPVTFVPL 219
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
L+DQL GGRL+ PVG S+QSL Q+ + DG I + L
Sbjct: 172 ALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVL 211
>sp|Q4UTP9|PIMT_XANC8 Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=pcm PE=3 SV=1
Length = 225
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DG I + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVLAPVTFVPL 219
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
L+DQL GGRL+ PVG S+QSL Q+ + DG I + L
Sbjct: 172 ALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVL 211
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLT 103
LIDQL+PGG+++IP+G + Q+L + K DG I P+ ++VPL
Sbjct: 179 LIDQLKPGGKMVIPIG-DRYLQHLYVVVKTRDGKIESRPVTPCLFVPLV 226
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
LIDQL+PGG+++IP+G + Q L + K DG I P+
Sbjct: 179 LIDQLKPGGKMVIPIG-DRYLQHLYVVVKTRDGKIESRPV 217
>sp|Q2YCR1|PIMT1_NITMU Protein-L-isoaspartate O-methyltransferase 1 OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=pcm1
PE=3 SV=1
Length = 236
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+ QL+PGGR+++P+G Q L ++K DG++T ++ V +VPL
Sbjct: 185 LLKQLKPGGRMVVPLGAPFMTQYLMLVEKQPDGSVTTHQIVPVRFVPL 232
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTIT 48
L+ QL+PGGR+++P+G Q L ++K DG++T
Sbjct: 185 LLKQLKPGGRMVVPLGAPFMTQYLMLVEKQPDGSVT 220
>sp|B6YX51|PIMT_THEON Protein-L-isoaspartate O-methyltransferase OS=Thermococcus
onnurineus (strain NA1) GN=pcm PE=3 SV=1
Length = 220
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 109
L++QL+PGG+LIIPVG Q L ++ K DG++ V +VPL +H W
Sbjct: 165 LVEQLKPGGKLIIPVGSYHLWQELYEVIKLKDGSVKVKRHGGVAFVPLIG-EHGW 218
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
L++QL+PGG+LIIPVG Q L ++ K DG++
Sbjct: 165 LVEQLKPGGKLIIPVGSYHLWQELYEVIKLKDGSV 199
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 4/51 (7%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDK 105
L +QLRPGGR++IPVG +Q+L + KN D + R M V++VPL K
Sbjct: 156 LKEQLRPGGRMVIPVG--SYSQDLLVVTKNHDIRVERA--MGVIFVPLIGK 202
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRT 50
L +QLRPGGR++IPVG +Q L + KN D + R
Sbjct: 156 LKEQLRPGGRMVIPVG--SYSQDLLVVTKNHDIRVERA 191
>sp|A5G4S7|PIMT2_GEOUR Protein-L-isoaspartate O-methyltransferase 2 OS=Geobacter
uraniireducens (strain Rf4) GN=pcm2 PE=3 SV=1
Length = 217
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 53 MQLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 111
M LIDQL GG+L+IPVG + S Q L +I K +G ++R + +V L + + W G
Sbjct: 159 MHLIDQLAVGGKLVIPVGNQ-SEQTLVRITKGENGAVSREDSIGCRFVKLIGR-YGWSG 215
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITR 49
LIDQL GG+L+IPVG + S Q+L +I K +G ++R
Sbjct: 161 LIDQLAVGGKLVIPVGNQ-SEQTLVRITKGENGAVSR 196
>sp|Q3BUS3|PIMT_XANC5 Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=pcm PE=3
SV=1
Length = 225
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
L+DQL GGRL+ PVG S+Q+L Q+ + DG I + L V +VPL
Sbjct: 173 LVDQLAVGGRLVAPVGGP-SSQSLVQLTRGADGAIEQQVLAPVTFVPL 219
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTI 47
L+DQL GGRL+ PVG S+QSL Q+ + DG I
Sbjct: 172 ALVDQLAVGGRLVAPVGGP-SSQSLVQLTRGADGAI 206
>sp|B1ZPF0|PIMT_OPITP Protein-L-isoaspartate O-methyltransferase OS=Opitutus terrae
(strain DSM 11246 / PB90-1) GN=pcm PE=3 SV=1
Length = 233
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 54 QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 106
+L +QL+ GGRL+IPVGP S Q L+ + K +G LM V +VP T ++
Sbjct: 181 KLFEQLKEGGRLVIPVGPAHSTQFLKLVTKR-NGKPHLHTLMPVRFVPFTREK 232
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDK 41
KL +QL+ GGRL+IPVGP S Q L+ + K
Sbjct: 181 KLFEQLKEGGRLVIPVGPAHSTQFLKLVTK 210
>sp|Q74CZ5|PIMT_GEOSL Protein-L-isoaspartate O-methyltransferase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=pcm PE=3 SV=2
Length = 207
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 54 QLIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTDK 105
Q IDQL+PGGRL+IPVG + Q L ++ K DG++ R + +V L K
Sbjct: 150 QYIDQLKPGGRLVIPVGTQFE-QVLVRVVKQEDGSVERENITGCRFVKLVGK 200
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITR 49
+ IDQL+PGGRL+IPVG + Q L ++ K DG++ R
Sbjct: 150 QYIDQLKPGGRLVIPVGTQFE-QVLVRVVKQEDGSVER 186
>sp|B0U4U6|PIMT_XYLFM Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain M12) GN=pcm PE=3 SV=1
Length = 210
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
LI+QL GGRL+ PVG S Q L Q+ + +DG+IT L V +V L
Sbjct: 158 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEILEPVTFVSL 204
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG+IT L
Sbjct: 158 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEIL 196
>sp|Q87AK5|PIMT_XYLFT Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=pcm PE=3 SV=1
Length = 225
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
LI+QL GGRL+ PVG S Q L Q+ + +DG+IT L V +V L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEILEPVTFVSL 219
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG+IT L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEIL 211
>sp|B2I8X8|PIMT_XYLF2 Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain M23) GN=pcm PE=3 SV=1
Length = 225
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
LI+QL GGRL+ PVG S Q L Q+ + +DG+IT L V +V L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEILEPVTFVSL 219
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG+IT L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEIL 211
>sp|Q9PF21|PIMT_XYLFA Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain 9a5c) GN=pcm PE=3 SV=1
Length = 225
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPL 102
LI+QL GGRL+ PVG S Q L Q+ + +DG IT L V +V L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGNITHEILEPVTFVSL 219
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 13 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG IT L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGNITHEIL 211
>sp|A6V1G4|PIMT_PSEA7 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas
aeruginosa (strain PA7) GN=pcm PE=3 SV=2
Length = 211
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGRL+IPVG G Q L I + DG +R L V +VPL +
Sbjct: 160 LLDQLAPGGRLVIPVGG-GEVQQLMLIVRTEDG-FSRQVLDSVRFVPLLN 207
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDG 45
L+DQL PGGRL+IPVG G Q L I + DG
Sbjct: 159 SLLDQLAPGGRLVIPVGG-GEVQQLMLIVRTEDG 191
>sp|P45683|PIMT_PSEAE Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas
aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 /
LMG 12228) GN=pcm PE=3 SV=2
Length = 211
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 55 LIDQLRPGGRLIIPVGPEGSAQNLEQIDKNLDGTITRTPLMQVVYVPLTD 104
L+DQL PGGRL+IPVG G Q L I + DG +R L V +VPL +
Sbjct: 160 LLDQLAPGGRLVIPVGG-GEVQQLMLIVRTEDG-FSRQVLDSVRFVPLLN 207
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 12 KLIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDG 45
L+DQL PGGRL+IPVG G Q L I + DG
Sbjct: 159 SLLDQLAPGGRLVIPVGG-GEVQQLMLIVRTEDG 191
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,289,872
Number of Sequences: 539616
Number of extensions: 1978001
Number of successful extensions: 6255
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 5933
Number of HSP's gapped (non-prelim): 417
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)