BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5588
(61 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P22061|PIMT_HUMAN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Homo
sapiens GN=PCMT1 PE=1 SV=4
Length = 227
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG+I PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSIKMKPLMGVIYVPLTDKEKQW 223
>sp|P15246|PIMT_BOVIN Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Bos
taurus GN=PCMT1 PE=1 SV=2
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|P23506|PIMT_MOUSE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Mus
musculus GN=Pcmt1 PE=1 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|P22062|PIMT_RAT Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Rattus
norvegicus GN=Pcmt1 PE=1 SV=2
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q5F3N1|PIMT_CHICK Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Gallus
gallus GN=PCMT1 PE=2 SV=3
Length = 228
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|P80895|PIMT_PIG Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Sus
scrofa GN=PCMT1 PE=1 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q5RA89|PIMT_PONAB Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Pongo
abelii GN=PCMT1 PE=2 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q4R5H0|PIMT_MACFA Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Macaca
fascicularis GN=PCMT1 PE=2 SV=3
Length = 227
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 43/55 (78%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
LIDQL+PGGRLI+PVGP G Q LEQ DK DG++ PLM V+YVPLTDK+ QW
Sbjct: 169 LIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQW 223
>sp|Q92047|PIMT_DANRE Protein-L-isoaspartate(D-aspartate) O-methyltransferase OS=Danio
rerio GN=pcmt PE=2 SV=3
Length = 228
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 41/55 (74%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
L+DQL+PGGRLI+PVGP G Q LEQ DK DG+ PLM V+YVPLTDK QW
Sbjct: 169 LLDQLKPGGRLILPVGPAGGNQMLEQYDKLEDGSTKMKPLMGVIYVPLTDKDKQW 223
>sp|Q27869|PIMT_DROME Protein-L-isoaspartate(D-aspartate) O-methyltransferase
OS=Drosophila melanogaster GN=Pcmt PE=1 SV=2
Length = 226
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 3 VELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
ELI+QL GGRLI+PVGP+G +Q ++Q DK+ +G + T LM V+YVPLTD
Sbjct: 172 TELINQLASGGRLIVPVGPDGGSQYMQQYDKDANGKVEMTRLMGVMYVPLTD 223
>sp|Q42539|PIMT_ARATH Protein-L-isoaspartate O-methyltransferase OS=Arabidopsis thaliana
GN=PCM PE=2 SV=3
Length = 230
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%), Gaps = 2/57 (3%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 61
LIDQL+PGGRL+IPVG Q L+ +DKN DG+++ V YVPLT ++ Q G
Sbjct: 175 LIDQLKPGGRLVIPVG--NIFQDLQVVDKNSDGSVSIKDETSVRYVPLTSREAQLRG 229
>sp|Q9GPS6|PIMT_DICDI Probable protein-L-isoaspartate O-methyltransferase
OS=Dictyostelium discoideum GN=pcmA PE=3 SV=1
Length = 316
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 4 ELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQ 58
ELIDQL+ GGR+++PVG L +DKN DG ++ L V +VPLT K++Q
Sbjct: 214 ELIDQLKNGGRIVMPVGKSNDFHELMVVDKNEDGIVSIKSLGVVRFVPLTSKENQ 268
>sp|Q123X2|PIMT2_POLSJ Protein-L-isoaspartate O-methyltransferase 2 OS=Polaromonas sp.
(strain JS666 / ATCC BAA-500) GN=pcm2 PE=3 SV=1
Length = 211
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 56
LI QL+ GGR++IPVG Q L ++KN DGT++ ++ V +VPLT ++
Sbjct: 160 LIRQLKAGGRMVIPVGAAFMVQQLMLVEKNRDGTVSTRQILPVAFVPLTGQR 211
>sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis
elegans GN=pcm-1 PE=2 SV=1
Length = 225
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
L DQL GGR++IPV Q QIDK ++G I + + V+YVPLT ++ QW
Sbjct: 169 LTDQLAEGGRMMIPVEQVDGNQVFMQIDK-INGKIEQKIVEHVIYVPLTSREEQW 222
>sp|Q43209|PIMT_WHEAT Protein-L-isoaspartate O-methyltransferase OS=Triticum aestivum
GN=PCM PE=1 SV=1
Length = 230
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQ 58
L++QL+PGGR++IPVG +Q L+ IDK+ DG+ + V YVPLT + Q
Sbjct: 175 LLEQLKPGGRMVIPVGT--YSQDLQVIDKSADGSTSVRNDASVRYVPLTSRSAQ 226
>sp|Q0KB67|PIMT1_CUPNH Protein-L-isoaspartate O-methyltransferase 1 OS=Cupriavidus necator
(strain ATCC 17699 / H16 / DSM 428 / Stanier 337)
GN=pcm1 PE=3 SV=1
Length = 259
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 56
LI QL+PGGR++IPVG + Q L ++K+ DGT++ ++ V +VPL K
Sbjct: 208 LIRQLKPGGRMVIPVGAQFLTQYLLLVEKSEDGTVSTRQILPVRFVPLVGKH 259
>sp|B2FK95|PIMT_STRMK Protein-L-isoaspartate O-methyltransferase OS=Stenotrophomonas
maltophilia (strain K279a) GN=pcm PE=3 SV=1
Length = 225
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V EL+ QL GGRL+ PVG G QSL Q+D+ DG+I + L V +VPL
Sbjct: 169 LVDELVGQLAEGGRLVAPVGGPGG-QSLVQLDRRADGSIEQRVLAPVTFVPL 219
>sp|B4SR93|PIMT_STRM5 Protein-L-isoaspartate O-methyltransferase OS=Stenotrophomonas
maltophilia (strain R551-3) GN=pcm PE=3 SV=1
Length = 225
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
LI+QL GGRL+ PVG SAQSL Q+D+ DG+I + L V +VPL
Sbjct: 173 LIEQLAEGGRLVAPVGGP-SAQSLVQLDRRADGSIEQHVLAPVTFVPL 219
>sp|Q88MF0|PIMT_PSEPK Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain KT2440) GN=pcm PE=3 SV=2
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
L+DQL PGGR++IPVGP G AQ L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPLLN 208
>sp|B0KSC8|PIMT_PSEPG Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain GB-1) GN=pcm PE=3 SV=2
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
L+DQL PGGR++IPVGP G AQ L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPLLN 208
>sp|A5W820|PIMT_PSEP1 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain F1 / ATCC 700007) GN=pcm PE=3 SV=2
Length = 212
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
L+DQL PGGR++IPVGP G AQ L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEAQQLMLIVREEHG-FSRRVLGAVRFVPLLN 208
>sp|Q5GYL2|PIMT_XANOR Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain KACC10331 / KXO85) GN=pcm PE=3 SV=1
Length = 225
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DGTI + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTIEQQVLAPVTFVPL 219
>sp|B2SUB3|PIMT_XANOP Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain PXO99A) GN=pcm PE=3 SV=1
Length = 225
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DGTI + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTIEQQVLAPVTFVPL 219
>sp|Q2P1L5|PIMT_XANOM Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas oryzae
pv. oryzae (strain MAFF 311018) GN=pcm PE=3 SV=1
Length = 225
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DGTI + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGTIEQQVLAPVTFVPL 219
>sp|B3E6I4|PIMT_GEOLS Protein-L-isoaspartate O-methyltransferase OS=Geobacter lovleyi
(strain ATCC BAA-1151 / DSM 17278 / SZ) GN=pcm PE=3 SV=1
Length = 217
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 56
L QL PGGRL+IPVG E S Q+L +I K DGT+T+ + +VPL +Q
Sbjct: 161 LAAQLAPGGRLVIPVGDE-SNQTLLRIRKAADGTLTQETGIGCRFVPLIGQQ 211
>sp|Q8PLR3|PIMT_XANAC Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=pcm PE=3 SV=1
Length = 225
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V LIDQL GGRL+ PVG S+QSL Q+ + DG I + L V +VPL
Sbjct: 169 LVDALIDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGAIEQQVLAPVTFVPL 219
>sp|A7HC32|PIMT1_ANADF Protein-L-isoaspartate O-methyltransferase 1 OS=Anaeromyxobacter
sp. (strain Fw109-5) GN=pcm1 PE=3 SV=1
Length = 212
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLT 53
L QL PGGR+++PVG Q L +DK DG T L+ V +VPLT
Sbjct: 160 LTAQLAPGGRMVVPVGAAPGLQVLRAVDKGNDGVDLSTDLIPVRFVPLT 208
>sp|Q9URZ1|PIMT_SCHPO Probable protein-L-isoaspartate O-methyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pcm2 PE=3 SV=1
Length = 230
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 4 ELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
+L+DQL+ G+++IP+G +Q++ I+KN G I++ L V YVPLTD
Sbjct: 174 KLVDQLKSPGKILIPIGT--YSQNIYLIEKNEQGKISKRTLFPVRYVPLTD 222
>sp|Q1D6W9|PIMT_MYXXD Protein-L-isoaspartate O-methyltransferase OS=Myxococcus xanthus
(strain DK 1622) GN=pcm PE=3 SV=1
Length = 212
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 3 VELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLD-GTITRT-PLMQVVYVPLTDK 55
++L+ QL+PGGR+IIPVGP G Q L +I + L G + + L+ V +VP+T +
Sbjct: 153 LQLLSQLKPGGRMIIPVGPRGGTQQLLRIQRALRPGEVPQVESLLSVRFVPMTGQ 207
>sp|Q8P9Y6|PIMT_XANCP Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=pcm PE=3 SV=1
Length = 225
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DG I + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVLAPVTFVPL 219
>sp|B0RTZ8|PIMT_XANCB Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain B100) GN=pcm PE=3 SV=1
Length = 225
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DG I + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVLAPVTFVPL 219
>sp|Q4UTP9|PIMT_XANC8 Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=pcm PE=3 SV=1
Length = 225
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DG I + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGG-ASSQSLVQLTRGADGEIAQEVLAPVTFVPL 219
>sp|Q1I655|PIMT_PSEE4 Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas
entomophila (strain L48) GN=pcm PE=3 SV=2
Length = 212
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
L+DQL PGGR++IPVGP G Q L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGETQQLMLIVREEQG-FSRRVLGAVRFVPLLN 208
>sp|B1JB29|PIMT_PSEPW Protein-L-isoaspartate O-methyltransferase OS=Pseudomonas putida
(strain W619) GN=pcm PE=3 SV=2
Length = 212
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTD 54
L+DQL PGGR++IPVGP G Q L I + G +R L V +VPL +
Sbjct: 160 LLDQLAPGGRMVIPVGPAGEVQQLMLIVREEQG-FSRRVLGAVRFVPLLN 208
>sp|A0LM89|PIMT2_SYNFM Protein-L-isoaspartate O-methyltransferase 2 OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=pcm2 PE=3 SV=1
Length = 247
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLT 53
L+DQL+PGGR+IIPVG Q L ++K+ G ++ V +VPLT
Sbjct: 196 LLDQLKPGGRMIIPVGGPFFVQQLMLVEKDEQGRTRTRQILPVAFVPLT 244
>sp|Q3BUS3|PIMT_XANC5 Protein-L-isoaspartate O-methyltransferase OS=Xanthomonas
campestris pv. vesicatoria (strain 85-10) GN=pcm PE=3
SV=1
Length = 225
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 1 MVVELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+V L+DQL GGRL+ PVG S+QSL Q+ + DG I + L V +VPL
Sbjct: 169 LVDALVDQLAVGGRLVAPVGGP-SSQSLVQLTRGADGAIEQQVLAPVTFVPL 219
>sp|B6YX51|PIMT_THEON Protein-L-isoaspartate O-methyltransferase OS=Thermococcus
onnurineus (strain NA1) GN=pcm PE=3 SV=1
Length = 220
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
L++QL+PGG+LIIPVG Q L ++ K DG++ V +VPL +H W
Sbjct: 165 LVEQLKPGGKLIIPVGSYHLWQELYEVIKLKDGSVKVKRHGGVAFVPLIG-EHGW 218
>sp|Q2YCR1|PIMT1_NITMU Protein-L-isoaspartate O-methyltransferase 1 OS=Nitrosospira
multiformis (strain ATCC 25196 / NCIMB 11849) GN=pcm1
PE=3 SV=1
Length = 236
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
L+ QL+PGGR+++P+G Q L ++K DG++T ++ V +VPL
Sbjct: 185 LLKQLKPGGRMVVPLGAPFMTQYLMLVEKQPDGSVTTHQIVPVRFVPL 232
>sp|B1ZPF0|PIMT_OPITP Protein-L-isoaspartate O-methyltransferase OS=Opitutus terrae
(strain DSM 11246 / PB90-1) GN=pcm PE=3 SV=1
Length = 233
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 4 ELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQ 56
+L +QL+ GGRL+IPVGP S Q L+ + K +G LM V +VP T ++
Sbjct: 181 KLFEQLKEGGRLVIPVGPAHSTQFLKLVTKR-NGKPHLHTLMPVRFVPFTREK 232
>sp|A2BKH8|PIMT_HYPBU Protein-L-isoaspartate O-methyltransferase OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=pcm PE=3 SV=1
Length = 241
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
LIDQL+PGG+++IP+G + Q L + K DG I P+ ++VPL
Sbjct: 179 LIDQLKPGGKMVIPIG-DRYLQHLYVVVKTRDGKIESRPVTPCLFVPL 225
>sp|O59534|PIMT_PYRHO Protein-L-isoaspartate O-methyltransferase OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=pcm PE=3 SV=2
Length = 220
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQW 59
L++QL+PGG+LIIPVG Q L ++ K DG+I V +VPL +H W
Sbjct: 165 LVEQLKPGGKLIIPVGSYHLWQELLEVIKREDGSIKIKNHGGVAFVPLIG-EHGW 218
>sp|B0U4U6|PIMT_XYLFM Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain M12) GN=pcm PE=3 SV=1
Length = 210
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG+IT L V +V L
Sbjct: 158 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEILEPVTFVSL 204
>sp|A0B9U1|PIMT_METTP Protein-L-isoaspartate O-methyltransferase OS=Methanosaeta
thermophila (strain DSM 6194 / PT) GN=pcm PE=3 SV=1
Length = 210
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 4/51 (7%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDK 55
L +QLRPGGR++IPVG +Q L + KN D + R M V++VPL K
Sbjct: 156 LKEQLRPGGRMVIPVG--SYSQDLLVVTKNHDIRVERA--MGVIFVPLIGK 202
>sp|Q87AK5|PIMT_XYLFT Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain Temecula1 / ATCC 700964) GN=pcm PE=3 SV=1
Length = 225
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG+IT L V +V L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEILEPVTFVSL 219
>sp|B2I8X8|PIMT_XYLF2 Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain M23) GN=pcm PE=3 SV=1
Length = 225
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG+IT L V +V L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGSITHEILEPVTFVSL 219
>sp|Q74CZ5|PIMT_GEOSL Protein-L-isoaspartate O-methyltransferase OS=Geobacter
sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
GN=pcm PE=3 SV=2
Length = 207
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 4 ELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDK 55
+ IDQL+PGGRL+IPVG + Q L ++ K DG++ R + +V L K
Sbjct: 150 QYIDQLKPGGRLVIPVGTQFE-QVLVRVVKQEDGSVERENITGCRFVKLVGK 200
>sp|B4RZG8|PIMT_ALTMD Protein-L-isoaspartate O-methyltransferase OS=Alteromonas macleodii
(strain DSM 17117 / Deep ecotype) GN=pcm1 PE=3 SV=1
Length = 211
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 3/49 (6%)
Query: 4 ELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
+L DQL+ GGRLIIPVG E QSL ID+ ++G + + + V +VPL
Sbjct: 160 DLCDQLKEGGRLIIPVGNE--QQSLLCIDR-IEGELKTSTIESVRFVPL 205
>sp|A5G4S7|PIMT2_GEOUR Protein-L-isoaspartate O-methyltransferase 2 OS=Geobacter
uraniireducens (strain Rf4) GN=pcm2 PE=3 SV=1
Length = 217
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 3 VELIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWPG 61
+ LIDQL GG+L+IPVG + S Q+L +I K +G ++R + +V L + + W G
Sbjct: 159 MHLIDQLAVGGKLVIPVGNQ-SEQTLVRITKGENGAVSREDSIGCRFVKLIGR-YGWSG 215
>sp|Q9PF21|PIMT_XYLFA Protein-L-isoaspartate O-methyltransferase OS=Xylella fastidiosa
(strain 9a5c) GN=pcm PE=3 SV=1
Length = 225
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPL 52
LI+QL GGRL+ PVG S Q+L Q+ + +DG IT L V +V L
Sbjct: 173 LIEQLAIGGRLVAPVGT-ASEQALVQLTRTIDGNITHEILEPVTFVSL 219
>sp|Q8TT94|PIMT2_METAC Protein-L-isoaspartate O-methyltransferase 2 OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=pcm2 PE=3 SV=1
Length = 238
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 5 LIDQLRPGGRLIIPVGPEGSAQSLEQIDKNLDGTITRTPLMQVVYVPLTDKQHQWP 60
L++QL+PGG ++IPVG +Q L ++ K+ +G I + +V++VP+ + H +P
Sbjct: 184 LLEQLKPGGIMVIPVG--DYSQELIRVKKDSNGNIYKKRKGEVIFVPMLGR-HGFP 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.140 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,271,938
Number of Sequences: 539616
Number of extensions: 731958
Number of successful extensions: 2614
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 2470
Number of HSP's gapped (non-prelim): 197
length of query: 61
length of database: 191,569,459
effective HSP length: 34
effective length of query: 27
effective length of database: 173,222,515
effective search space: 4677007905
effective search space used: 4677007905
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)