Query psy5596
Match_columns 154
No_of_seqs 131 out of 1125
Neff 6.8
Searched_HMMs 13730
Date Fri Aug 16 21:35:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5596.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5596hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xpua3 c.37.1.11 (A:129-417) 99.8 3.8E-20 2.8E-24 149.9 1.9 81 1-86 199-282 (289)
2 d2jdid1 a.69.1.1 (D:358-475) F 99.4 7.8E-13 5.7E-17 93.0 9.8 86 43-138 3-98 (118)
3 d1skye1 a.69.1.1 (E:357-470) F 99.4 9.4E-13 6.8E-17 92.0 9.9 81 53-138 5-95 (114)
4 d1fx0b1 a.69.1.1 (B:378-485) F 99.4 5.7E-13 4.1E-17 92.6 7.3 81 53-138 5-95 (108)
5 d1skyb1 a.69.1.1 (B:372-502) F 98.4 6.6E-07 4.8E-11 63.5 8.2 83 54-143 3-85 (131)
6 d1fx0a1 a.69.1.1 (A:373-501) F 98.4 8.5E-07 6.2E-11 62.7 8.7 83 54-143 3-85 (129)
7 d2jdia1 a.69.1.1 (A:380-510) F 98.3 1.3E-06 9.2E-11 61.9 8.3 83 54-143 3-85 (131)
8 d2ba0d2 d.101.1.1 (D:154-252) 61.6 1.2 8.5E-05 28.0 0.9 25 1-25 2-26 (99)
9 d1r6la2 d.101.1.1 (A:152-239) 56.3 1.9 0.00014 26.7 1.2 24 1-24 5-28 (88)
10 d2je6b2 d.101.1.1 (B:156-241) 54.4 2.1 0.00015 26.1 1.2 26 1-26 2-27 (86)
11 d1udsa2 d.101.1.1 (A:151-255) 46.3 3.3 0.00024 26.5 1.2 25 1-25 5-29 (105)
12 d2nn6b2 d.101.1.1 (B:151-240) 46.2 3.8 0.00028 24.9 1.4 34 1-34 2-36 (90)
13 d1y6ia2 a.261.1.1 (A:83-233) M 39.7 7.8 0.00056 26.6 2.3 23 24-47 120-142 (151)
14 d2nn6d2 d.101.1.1 (D:147-235) 24.2 13 0.00095 22.0 1.2 25 1-25 2-27 (89)
No 1
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=99.76 E-value=3.8e-20 Score=149.94 Aligned_cols=81 Identities=7% Similarity=0.028 Sum_probs=64.7
Q ss_pred CCCCcccccccccccEEEechhhhhCCCCCCCcCCCChhHHHHHhhccccCcHHHHHHHHH---HHHHHHccHhHHHHHh
Q psy5596 1 ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEDMTRKDHSDVSNQ---LYACYAIGKDVQAMKA 77 (154)
Q Consensus 1 ~tdPI~d~~~~ilDGhivLsr~LA~~g~yPAId~l~S~SR~~~~v~~~~~~~~~~~~~a~~---~~~~y~~~~eL~~ig~ 77 (154)
++|||+|++++|+||||||||+||++||||||||+.|+||+++.++++ +|.+.+.. +++.|.+++++..+..
T Consensus 199 ~~~pI~~~~~~i~dg~ivLsr~la~~g~~PAId~~~S~SR~~~~l~~~-----~~~~~~~~lRr~l~~~~~~~~~e~Li~ 273 (289)
T d1xpua3 199 MDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQ-----EELQKMWILRKIIHPMGEIDAMEFLIN 273 (289)
T ss_dssp HHHHHHHHHTTTSSEEEEBCHHHHTTTCSSCBCTTTCEESCGGGGSCH-----HHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cCchHHHHHhcccCeEEEEchhHHhCCCCCCCccCCcccccchhhCCH-----HHHHHHHHHHHHHHhcchHHHHHHHHH
Confidence 368999999999999999999999999999999999999999998774 78887754 4444455555666666
Q ss_pred hhcCCCCCH
Q psy5596 78 VVGEEALTP 86 (154)
Q Consensus 78 ~~G~d~l~d 86 (154)
..|....++
T Consensus 274 ~l~~tk~N~ 282 (289)
T d1xpua3 274 KLAMTKTND 282 (289)
T ss_dssp HHTTSCSTH
T ss_pred HHccCCCHH
Confidence 555455443
No 2
>d2jdid1 a.69.1.1 (D:358-475) F1 ATP synthase beta subunit, domain 3 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.40 E-value=7.8e-13 Score=93.04 Aligned_cols=86 Identities=22% Similarity=0.266 Sum_probs=75.0
Q ss_pred HHhhccccCcHHHHHHHHHHHHHHHccHhHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCC----------CCC
Q psy5596 43 KSAIGEDMTRKDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFVSQGNYE----------NRT 112 (154)
Q Consensus 43 ~~v~~~~~~~~~~~~~a~~~~~~y~~~~eL~~ig~~~G~d~l~d~~~~~~~~~~~i~~~fL~Q~~~~----------~~~ 112 (154)
|.+++ ++|+.+|+++...++++++|++++++.|.|.|+++|+.++.+|++| +.||.|+++. .++
T Consensus 3 P~ivG-----e~Hy~~a~~V~~~LqrYkeLqdIIaiLG~dELSeeDk~~V~RARkl-qrfLsQpFfvae~fTg~~G~~V~ 76 (118)
T d2jdid1 3 PNIVG-----SEHYDVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVSRARKI-QRFLSQPFQVAEVFTGHLGKLVP 76 (118)
T ss_dssp HHHHC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHH-HHHHCCCCGGGHHHHSSCCCCCC
T ss_pred ccccC-----hHHHHHHHHHHHHHHHhHHHHHHHHHcChhhcCHHHhHHHHHHHHH-HHHhcCcceeeeeecCCCcceec
Confidence 56677 4999999999999999999999999999999999999999999999 9999999985 477
Q ss_pred HHHHHHHHHHHHhhCChHhhcCCChh
Q psy5596 113 VYESLDIGWQLLRIFPKEMLKRIPAS 138 (154)
Q Consensus 113 ~~~sl~~~~~ll~~~~~~~~~~i~~~ 138 (154)
+.+|+.-...++ .|+++.+|++
T Consensus 77 l~dTi~g~~~Il----~G~~D~~pE~ 98 (118)
T d2jdid1 77 LKETIKGFQQIL----AGEYDHLPEQ 98 (118)
T ss_dssp HHHHHHHHHHHH----TTTTTTSCGG
T ss_pred HHHHHHHHHHHh----CCCCCCCCHH
Confidence 888887655554 4677777775
No 3
>d1skye1 a.69.1.1 (E:357-470) F1 ATP synthase beta subunit, domain 3 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=99.40 E-value=9.4e-13 Score=92.04 Aligned_cols=81 Identities=20% Similarity=0.264 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHccHhHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCC----------CCCHHHHHHHHHH
Q psy5596 53 KDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFVSQGNYE----------NRTVYESLDIGWQ 122 (154)
Q Consensus 53 ~~~~~~a~~~~~~y~~~~eL~~ig~~~G~d~l~d~~~~~~~~~~~i~~~fL~Q~~~~----------~~~~~~sl~~~~~ 122 (154)
++|+++|+++...++++++|++|+++.|.|.|+++|+.++.+|++| +.||.|+++. .+++.+|+.-...
T Consensus 5 ~~Hy~~a~~v~~~LqrYkeLqDIIaiLG~dELSeeDk~~V~RARkl-qrFLsQpF~vaE~fTG~~G~~V~l~dTi~g~~~ 83 (114)
T d1skye1 5 EEHYQVARKVQQTLERYKELQDIIAILGMDELSDEDKLVVHRARRI-QFFLSQNFHVAEQFTGQPGSYVPVKETVRGFKE 83 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCTTHHHHHHHHHHHH-HHHTCBCCTTTHHHHSCCCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhcCHHHHHHHHHHHHH-HHHhcCCceeceeecCCCeeEeeHHHHHHHHHH
Confidence 4999999999999999999999999999999999999999999999 9999999986 4678888776555
Q ss_pred HHhhCChHhhcCCChh
Q psy5596 123 LLRIFPKEMLKRIPAS 138 (154)
Q Consensus 123 ll~~~~~~~~~~i~~~ 138 (154)
++ .|+++.+|++
T Consensus 84 Il----~G~~D~~pE~ 95 (114)
T d1skye1 84 IL----EGKYDHLPED 95 (114)
T ss_dssp HH----TTTTTTSCGG
T ss_pred Hh----CCCCCCCCHH
Confidence 54 4677888775
No 4
>d1fx0b1 a.69.1.1 (B:378-485) F1 ATP synthase beta subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=99.37 E-value=5.7e-13 Score=92.56 Aligned_cols=81 Identities=19% Similarity=0.322 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHccHhHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCC----------CCHHHHHHHHHH
Q psy5596 53 KDHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFVSQGNYEN----------RTVYESLDIGWQ 122 (154)
Q Consensus 53 ~~~~~~a~~~~~~y~~~~eL~~ig~~~G~d~l~d~~~~~~~~~~~i~~~fL~Q~~~~~----------~~~~~sl~~~~~ 122 (154)
++|+++|+++...++++++|++++++.|.+.|+++++.++.+|++| +.||.|+++.. +++.+|+.
T Consensus 5 ~~Hy~~a~~v~~iLqrYkeLqdIIailG~dELSeeDk~~v~RArkl-q~FLtQpFfvae~fTg~~G~~V~l~dTi~---- 79 (108)
T d1fx0b1 5 EEHYEIAQRVKETLQRYKELQDIIAILGLDELSEEDRLTVARARKI-ERFLSQPFFVAEVFTGSPGKYVGLAETIR---- 79 (108)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCTTTHHHHHHHHHH-HHHTCCCCSSCTTTSCSCCCCCCHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcChhhhHHHHHHHHH-HHHhccccccceecCCCCcCEecHHHHHh----
Confidence 5999999999999999999999999999999999999999999999 99999999975 44555554
Q ss_pred HHhhCChHhhcCCChh
Q psy5596 123 LLRIFPKEMLKRIPAS 138 (154)
Q Consensus 123 ll~~~~~~~~~~i~~~ 138 (154)
-++.+-.|+++.+|++
T Consensus 80 g~~~IL~G~~D~~pE~ 95 (108)
T d1fx0b1 80 GFQLILSGELDSLPEQ 95 (108)
T ss_dssp HHHTTTTTTTSSSCGG
T ss_pred hHHHHhCCCcCCCCHH
Confidence 4555667789999886
No 5
>d1skyb1 a.69.1.1 (B:372-502) F1 ATP synthase alpha subunit, domain 3 {Bacillus sp., strain ps3 [TaxId: 1409]}
Probab=98.38 E-value=6.6e-07 Score=63.46 Aligned_cols=83 Identities=14% Similarity=0.134 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHccHhHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHhhCChHhhc
Q psy5596 54 DHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFVSQGNYENRTVYESLDIGWQLLRIFPKEMLK 133 (154)
Q Consensus 54 ~~~~~a~~~~~~y~~~~eL~~ig~~~G~d~l~d~~~~~~~~~~~i~~~fL~Q~~~~~~~~~~sl~~~~~ll~~~~~~~~~ 133 (154)
...++++.++-.|++++||..+.++. .++++..+..+.+++++ ...|+|+.++|++.++.+..++ ++.+|.++
T Consensus 3 amKkvag~lkl~laQyrEle~FaqFg--sdLD~~t~~~L~rG~rl-~ElLKQ~q~sP~~v~eQv~iLy----A~~~G~LD 75 (131)
T d1skyb1 3 AMKKVAGTLRLDLAAYRELEAFAQFG--SDLDKATQANVARGART-VEVLKQDLHQPIPVEKQVLIIY----ALTRGFLD 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-CCCC---CC-CHHHHHHHHHHHHH-HHHHCCCTTCCCCHHHHHHHHH----HTTTTTTT
T ss_pred hHHHHhhHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHhhHHH-HHHHhCCCCCCcCHHHHHHHHH----HHhCCccc
Confidence 45778899999999999999999983 58999999999999999 9999999999999998888666 44677889
Q ss_pred CCChhHHHhh
Q psy5596 134 RIPASTLAEF 143 (154)
Q Consensus 134 ~i~~~~i~~~ 143 (154)
.||.+-|.+|
T Consensus 76 ~Ipv~~I~~f 85 (131)
T d1skyb1 76 DIPVEDVRRF 85 (131)
T ss_dssp TSCGGGHHHH
T ss_pred cCcHHHHHHH
Confidence 9999888877
No 6
>d1fx0a1 a.69.1.1 (A:373-501) F1 ATP synthase alpha subunit, domain 3 {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=98.38 E-value=8.5e-07 Score=62.70 Aligned_cols=83 Identities=13% Similarity=0.099 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHHHccHhHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHhhCChHhhc
Q psy5596 54 DHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFVSQGNYENRTVYESLDIGWQLLRIFPKEMLK 133 (154)
Q Consensus 54 ~~~~~a~~~~~~y~~~~eL~~ig~~~G~d~l~d~~~~~~~~~~~i~~~fL~Q~~~~~~~~~~sl~~~~~ll~~~~~~~~~ 133 (154)
...++++.++-.|++++||..+.++ | .++.+..+..+.+|+++ ...|+|+.|+|++.++.+..++.+ .+|.++
T Consensus 3 amk~vag~lkl~laQy~El~aFaqf-g-sdlD~~t~~~l~rG~rl-~ElLKQ~q~~Pl~v~eQv~iLyA~----~~G~LD 75 (129)
T d1fx0a1 3 AMKKVAGKLKLELAQFAELEAFAQF-A-SDLDKATQNQLARGQRL-RELLKQPQSAPLTVEEQVMTIYTG----TNGYLD 75 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTGGG-C-SSCCHHHHHHHHHHHHH-HHHHCCCTTCCCCHHHHHHHHHHH----HTTSSS
T ss_pred hHHHHhhHHHHHHHHHHHHHHHHhh-c-cchhHHHHHhhhHHHHH-HHHHHcccccCCCHHHHHHHHHHH----HcCccc
Confidence 4577889999999999999999997 3 58999999999999999 999999999999999998887766 456788
Q ss_pred CCChhHHHhh
Q psy5596 134 RIPASTLAEF 143 (154)
Q Consensus 134 ~i~~~~i~~~ 143 (154)
.||.+-|..|
T Consensus 76 ~ipv~~I~~f 85 (129)
T d1fx0a1 76 SLELDQVRKY 85 (129)
T ss_dssp SSCHHHHHHH
T ss_pred cCCHHHHHHH
Confidence 9999888877
No 7
>d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.31 E-value=1.3e-06 Score=61.89 Aligned_cols=83 Identities=17% Similarity=0.268 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHccHhHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHhhCChHhhc
Q psy5596 54 DHSDVSNQLYACYAIGKDVQAMKAVVGEEALTPDDLLYLEFLTKFEKNFVSQGNYENRTVYESLDIGWQLLRIFPKEMLK 133 (154)
Q Consensus 54 ~~~~~a~~~~~~y~~~~eL~~ig~~~G~d~l~d~~~~~~~~~~~i~~~fL~Q~~~~~~~~~~sl~~~~~ll~~~~~~~~~ 133 (154)
...++++.++-.|++++||..+.++ | .++.+..+..+.+|+++ ...|+|+.++|++..+.+..++.+ .+|.++
T Consensus 3 amkkvag~lkl~lAQyrEle~FaqF-~-sdlD~~t~~~l~rG~rl-~ElLKQ~q~~Pl~v~eQv~iL~A~----~~G~lD 75 (131)
T d2jdia1 3 AMKQVAGTMKLELAQYREVAAFAQF-G-SDLDAATQQLLSRGVRL-TELLKQGQYSPMAIEEQVAVIYAG----VRGYLD 75 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTGGGSSS-C-SSSCHHHHHHHHHHHHH-HHHTCCCSSCCCCHHHHHHHHHHH----HTTTTT
T ss_pred hHHHHhhHHHHHHHHHHHHHHHHhh-h-hhhhHHHHhhhhhHHHH-HHHHhcccccchhHHHHHHHHHHH----hcCCcc
Confidence 5677889999999999999999997 3 58999999999999999 999999999999999998887755 356677
Q ss_pred CCChhHHHhh
Q psy5596 134 RIPASTLAEF 143 (154)
Q Consensus 134 ~i~~~~i~~~ 143 (154)
.||.+-|.+|
T Consensus 76 ~i~v~~I~~f 85 (131)
T d2jdia1 76 KLEPSKITKF 85 (131)
T ss_dssp TSCGGGHHHH
T ss_pred ccCHHHHHHH
Confidence 8887777666
No 8
>d2ba0d2 d.101.1.1 (D:154-252) Exosome complex exonuclease 1, ECX1 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=61.56 E-value=1.2 Score=28.01 Aligned_cols=25 Identities=16% Similarity=0.195 Sum_probs=22.4
Q ss_pred CCCCcccccccccccEEEechhhhh
Q psy5596 1 ITHPIPDLTGYITEGQIYVDRQLHN 25 (154)
Q Consensus 1 ~tdPI~d~~~~ilDGhivLsr~LA~ 25 (154)
|++||+..+-+++||.++||....+
T Consensus 2 m~~~V~avsvG~~d~~~llDp~~~E 26 (99)
T d2ba0d2 2 MKGMITSVAVGKADGQLVLDPMKEE 26 (99)
T ss_dssp BSSEEEEEEEEEETTEEEESCCHHH
T ss_pred CCCcEEEEEEEEECCEEEEcCCcch
Confidence 6899999999999999999997664
No 9
>d1r6la2 d.101.1.1 (A:152-239) Ribonuclease PH, domain 2 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=56.34 E-value=1.9 Score=26.70 Aligned_cols=24 Identities=13% Similarity=0.131 Sum_probs=21.1
Q ss_pred CCCCcccccccccccEEEechhhh
Q psy5596 1 ITHPIPDLTGYITEGQIYVDRQLH 24 (154)
Q Consensus 1 ~tdPI~d~~~~ilDGhivLsr~LA 24 (154)
|.+||+...-+++||+++|+-.-.
T Consensus 5 ~~~~VaavsvG~idg~~vld~~~~ 28 (88)
T d1r6la2 5 LKQMVAAVSVGIYQGVPVLDLDYL 28 (88)
T ss_dssp BCCCEEEEEEEEETTEEEESCCHH
T ss_pred cCCCccEEEEEEECCEEEecCcHH
Confidence 578999999999999999998654
No 10
>d2je6b2 d.101.1.1 (B:156-241) Exosome complex exonuclease 1, ECX1 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=54.43 E-value=2.1 Score=26.09 Aligned_cols=26 Identities=15% Similarity=0.152 Sum_probs=23.4
Q ss_pred CCCCcccccccccccEEEechhhhhC
Q psy5596 1 ITHPIPDLTGYITEGQIYVDRQLHNR 26 (154)
Q Consensus 1 ~tdPI~d~~~~ilDGhivLsr~LA~~ 26 (154)
|.|||+..+-+++||.++||....+.
T Consensus 2 m~d~V~avsvg~~d~~~llDp~~~E~ 27 (86)
T d2je6b2 2 MRDLIAGVAVGKADGVIILDLNETEA 27 (86)
T ss_dssp BSSCCEEEEEEEETTEEEESCCHHHH
T ss_pred CCCCeEEEEEEEECCEEEEecchhhh
Confidence 57999999999999999999988864
No 11
>d1udsa2 d.101.1.1 (A:151-255) Ribonuclease PH, domain 2 {Aquifex aeolicus [TaxId: 63363]}
Probab=46.32 E-value=3.3 Score=26.49 Aligned_cols=25 Identities=16% Similarity=0.250 Sum_probs=21.9
Q ss_pred CCCCcccccccccccEEEechhhhh
Q psy5596 1 ITHPIPDLTGYITEGQIYVDRQLHN 25 (154)
Q Consensus 1 ~tdPI~d~~~~ilDGhivLsr~LA~ 25 (154)
|++||+...-+++||.++||-.-.+
T Consensus 5 ~~~~VaAVsvG~idg~~vldp~~~E 29 (105)
T d1udsa2 5 IKDFVAAVSVGIVNDRILLDLNFEE 29 (105)
T ss_dssp BCCCEEEEEEEEETTEEEESCCHHH
T ss_pred ccCCceEEEEEEECCEEeecCCHHH
Confidence 5789999999999999999987553
No 12
>d2nn6b2 d.101.1.1 (B:151-240) Exosome complex exonuclease RRP41 {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.24 E-value=3.8 Score=24.90 Aligned_cols=34 Identities=9% Similarity=0.069 Sum_probs=26.4
Q ss_pred CCCCcccccccccccEEEechhhhh-CCCCCCCcC
Q psy5596 1 ITHPIPDLTGYITEGQIYVDRQLHN-RQIYPPINV 34 (154)
Q Consensus 1 ~tdPI~d~~~~ilDGhivLsr~LA~-~g~yPAId~ 34 (154)
|.|+|+..+-+++||.++||....+ ..--|-+.+
T Consensus 2 m~d~V~avs~g~~~~~~llDp~~~E~~~~~~~l~v 36 (90)
T d2nn6b2 2 MRDFVCACSAGFVDGTALADLSHVEEAAGGPQLAL 36 (90)
T ss_dssp CSSCCEEEEEEEETTEEEESCCHHHHTSSCCCEEE
T ss_pred CCCCeEEEEEEEECCEEeeCCccccccccccceEE
Confidence 6789999999999999999999774 333444544
No 13
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=39.69 E-value=7.8 Score=26.59 Aligned_cols=23 Identities=22% Similarity=0.271 Sum_probs=18.9
Q ss_pred hhCCCCCCCcCCCChhHHHHHhhc
Q psy5596 24 HNRQIYPPINVLPSLSRLMKSAIG 47 (154)
Q Consensus 24 A~~g~yPAId~l~S~SR~~~~v~~ 47 (154)
|-.||+|.++.+..+ |++..+.+
T Consensus 120 AP~GHLP~~~~lrG~-~~~~~l~~ 142 (151)
T d1y6ia2 120 APQGHLPLLNQLRGV-RVAESLYR 142 (151)
T ss_dssp SCTTCCSCCCCTTCT-HHHHHHHT
T ss_pred CCCCCCCccchhhhH-HHHHHHHc
Confidence 679999999999988 67766654
No 14
>d2nn6d2 d.101.1.1 (D:147-235) Exosome complex exonuclease RRP46 {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.16 E-value=13 Score=22.04 Aligned_cols=25 Identities=8% Similarity=0.189 Sum_probs=19.3
Q ss_pred CCCCccccccccc-ccEEEechhhhh
Q psy5596 1 ITHPIPDLTGYIT-EGQIYVDRQLHN 25 (154)
Q Consensus 1 ~tdPI~d~~~~il-DGhivLsr~LA~ 25 (154)
|.++|+..+-++. ||++++|....+
T Consensus 2 m~~~v~av~~~~~~dg~~vlDpt~~E 27 (89)
T d2nn6d2 2 MRALFCGVACALDSDGTLVLDPTSKQ 27 (89)
T ss_dssp CSSCEEEEEEEECTTCCEEESCCHHH
T ss_pred CCCCEeEEEEEEEcCCceeeCCCHHH
Confidence 5678888777766 999999976554
Done!