BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5600
(413 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y5K3|PCY1B_HUMAN Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B
PE=1 SV=1
Length = 369
Score = 285 bits (728), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/347 (44%), Positives = 187/347 (53%), Gaps = 99/347 (28%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIER 104
A R VRVYADGI+D+FH GH+R LMQAK +FPN YL+VGVCSD LTH+ KG TVMN+ ER
Sbjct: 73 ADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAER 132
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYE 164
YEA+RHCRYVDEV+RDAPW EFL KHK
Sbjct: 133 YEALRHCRYVDEVIRDAPWTLTPEFLEKHK------------------------------ 162
Query: 165 QRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSD 224
IDF+AHDDIPY S DVY H+K GMFV TQRTEG+STSD
Sbjct: 163 ------------------IDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSD 204
Query: 225 IVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQA 284
I+ RIVRDYD+Y RRNL RGYTAK+LNVSF+N + + D + + +
Sbjct: 205 IITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDKMKE-----------KV 253
Query: 285 KNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGERRVD 344
KNV ++RSK + + E+ D
Sbjct: 254 KNV----------------------------------------EERSKEFVNRVEEKSHD 273
Query: 345 MIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAFSPPASP 391
+IQKWEEKSR+ I FL LFG +G K M+ E + LQA SP SP
Sbjct: 274 LIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSRMLQALSPKQSP 320
>sp|Q9QZC4|PCY1B_RAT Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus
GN=Pcyt1b PE=2 SV=1
Length = 369
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 186/345 (53%), Gaps = 99/345 (28%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R VRVYADGI+D+FH GH+R LMQAK +FPN YL+VGVCSD LTH+ KG TVMN+ ERYE
Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYE 134
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
A+RHCRYVDEV+RDAPW EFL KHK
Sbjct: 135 ALRHCRYVDEVIRDAPWTLTPEFLEKHK-------------------------------- 162
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
IDF+AHDDIPY S DVY H+K GMFV TQRTEG+STSDI+
Sbjct: 163 ----------------IDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDII 206
Query: 227 ARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKN 286
RIVRDYD+Y RRNL RGYTAK+LNVSF+N +K R F + + KN
Sbjct: 207 TRIVRDYDVYARRNLQRGYTAKELNVSFIN--EKKYR---------FQNQVDKMKEKVKN 255
Query: 287 VFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGERRVDMI 346
V ++RSK + + E+ D+I
Sbjct: 256 V----------------------------------------EERSKEFVNRVEEKSHDLI 275
Query: 347 QKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAFSPPASP 391
QKWEEKSR+ I FL LFG +G K M+ E + LQA SP SP
Sbjct: 276 QKWEEKSREFIGNFLELFGPDGAWKQMFQERSSRMLQALSPKQSP 320
>sp|Q811Q9|PCY1B_MOUSE Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b
PE=1 SV=2
Length = 369
Score = 284 bits (726), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 157/345 (45%), Positives = 186/345 (53%), Gaps = 99/345 (28%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R VRVYADGI+D+FH GH+R LMQAK +FPN YL+VGVCSD LTH+ KG TVMN+ ERYE
Sbjct: 75 RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYE 134
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
A+RHCRYVDEV+RDAPW EFL KHK
Sbjct: 135 ALRHCRYVDEVIRDAPWTLTPEFLEKHK-------------------------------- 162
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
IDF+AHDDIPY S DVY H+K GMFV TQRTEG+STSDI+
Sbjct: 163 ----------------IDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDII 206
Query: 227 ARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKN 286
RIVRDYD+Y RRNL RGYTAK+LNVSF+N +K R F + + KN
Sbjct: 207 TRIVRDYDVYARRNLQRGYTAKELNVSFIN--EKKYR---------FQNQVDKMKEKVKN 255
Query: 287 VFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGERRVDMI 346
V ++RSK + + E+ D+I
Sbjct: 256 V----------------------------------------EERSKEFVNRVEEKSHDLI 275
Query: 347 QKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAFSPPASP 391
QKWEEKSR+ I FL LFG +G K M+ E + LQA SP SP
Sbjct: 276 QKWEEKSREFIGNFLELFGPDGAWKQMFQERSSRMLQALSPKQSP 320
>sp|P49585|PCY1A_HUMAN Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A
PE=1 SV=2
Length = 367
Score = 244 bits (624), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 181/348 (52%), Gaps = 113/348 (32%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIER 104
R VRVYADGI+D+FH GH+R LMQAKN+FPN YLIVGVCSD LTH KG TVMN+ ER
Sbjct: 73 CERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENER 132
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYE 164
Y+AV+HCRYVDEVVR+APW EFLA+H
Sbjct: 133 YDAVQHCRYVDEVVRNAPWTLTPEFLAEH------------------------------- 161
Query: 165 QRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSD 224
RIDF+AHDDIPY S DVY H+K GMF TQRTEG+STSD
Sbjct: 162 -----------------RIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSD 204
Query: 225 IVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQA 284
I+ RIVRD YD++ + + ++ A
Sbjct: 205 IITRIVRD-------------------------------------YDVYARRNLQRGYTA 227
Query: 285 KNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDR-------SKRVMEN 337
K + NV I +EKK+ Q ++++ K + SK ++
Sbjct: 228 KEL--NVSFI-------------------NEKKYHLQERVDKVKKKVKDVEEKSKEFVQK 266
Query: 338 IGERRVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAF 385
+ E+ +D+IQKWEEKSR+ I +FL +FG EG LKHM EGKG+ LQA
Sbjct: 267 VEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAI 314
>sp|P19836|PCY1A_RAT Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus
GN=Pcyt1a PE=1 SV=2
Length = 367
Score = 243 bits (621), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 181/348 (52%), Gaps = 113/348 (32%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIER 104
R VRVYADGI+D+FH GH+R LMQAKN+FPN YLIVGVCSD LTH KG TVMN+ ER
Sbjct: 73 CERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENER 132
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYE 164
Y+AV+HCRYVDEVVR+APW EFLA+H
Sbjct: 133 YDAVQHCRYVDEVVRNAPWTLTPEFLAEH------------------------------- 161
Query: 165 QRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSD 224
RIDF+AHDDIPY S DVY H+K GMF TQRTEG+STSD
Sbjct: 162 -----------------RIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSD 204
Query: 225 IVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQA 284
I+ RIVRD YD++ + + ++ A
Sbjct: 205 IITRIVRD-------------------------------------YDVYARRNLQRGYTA 227
Query: 285 KNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDR-------SKRVMEN 337
K + NV I +EKK+ Q ++++ K + SK ++
Sbjct: 228 KEL--NVSFI-------------------NEKKYHLQERVDKVKKKVKDVEEKSKEFVQK 266
Query: 338 IGERRVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAF 385
+ E+ +D+IQKWEEKSR+ I +FL +FG EG LKHM EGKG+ LQA
Sbjct: 267 VEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAI 314
>sp|P49586|PCY1A_MOUSE Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a
PE=1 SV=1
Length = 367
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 181/348 (52%), Gaps = 113/348 (32%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIER 104
R VRVYADGI+D+FH GH+R LMQAKN+FPN YLIVGVCSD LTH KG TVMN+ ER
Sbjct: 73 CERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENER 132
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYE 164
Y+AV+HCRYVDEVVR+APW EFLA+H
Sbjct: 133 YDAVQHCRYVDEVVRNAPWTLTPEFLAEH------------------------------- 161
Query: 165 QRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSD 224
RIDF+AHDDIPY S DVY H+K GMF TQRTEG+STSD
Sbjct: 162 -----------------RIDFVAHDDIPYSSAGSDDVYKHIKDAGMFAPTQRTEGISTSD 204
Query: 225 IVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQA 284
I+ RIVRD YD++ + + ++ A
Sbjct: 205 IITRIVRD-------------------------------------YDVYARRNLQRGYTA 227
Query: 285 KNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDR-------SKRVMEN 337
K + NV I +EKK+ Q ++++ K + SK ++
Sbjct: 228 KEL--NVSFI-------------------NEKKYHLQERVDKVKKKVKDVEEKSKEFVQK 266
Query: 338 IGERRVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAF 385
+ E+ +D+IQKWEEKSR+ I +FL +FG EG LKHM EGKG+ LQA
Sbjct: 267 VEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAI 314
>sp|P49584|PCY1A_CRIGR Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus
GN=PCYT1A PE=2 SV=1
Length = 367
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 179/348 (51%), Gaps = 113/348 (32%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIER 104
R VRVYADGI+D+FH GH+R LMQAKN+FPN Y IVGVCSD LTH KG TVMN+ ER
Sbjct: 73 CERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENER 132
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYE 164
Y+AV+HCRYVDEVVR+APW EFLA+H
Sbjct: 133 YDAVQHCRYVDEVVRNAPWTLTPEFLAEH------------------------------- 161
Query: 165 QRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSD 224
RIDF+AHDDIPY S DVY H+K GMF TQRTEG+STSD
Sbjct: 162 -----------------RIDFVAHDDIPYSSAGSDDVYKHIKEAGMFAPTQRTEGISTSD 204
Query: 225 IVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQA 284
I+ RIVRD YD++ + + ++ A
Sbjct: 205 IITRIVRD-------------------------------------YDVYARRNLQRGYTA 227
Query: 285 KNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDR-------SKRVMEN 337
K + NV I +EKK+ Q ++++ K + SK ++
Sbjct: 228 KEL--NVSFI-------------------NEKKYHLQERVDKVKKKVKDVEEKSKEFVQK 266
Query: 338 IGERRVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAF 385
+ ER +D+IQ WEEKSR+ I +FL +FG EG LKHM EGKG+ LQA
Sbjct: 267 VEERSIDLIQTWEEKSREFIGSFLEMFGPEGALKHMLKEGKGRMLQAI 314
>sp|P49583|PCY1_CAEEL Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis
elegans GN=F08C6.2 PE=2 SV=2
Length = 362
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/227 (47%), Positives = 132/227 (58%), Gaps = 48/227 (21%)
Query: 43 NNASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDI 102
N A R VR+YADGIYD+FH GH+ QL Q K +FPNVYLIVGVC D TH+ KGRTV ++
Sbjct: 75 NEAGRPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEE 134
Query: 103 ERYEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCN 162
ERY+ VRHCRYVDEV R+APW EFL K
Sbjct: 135 ERYDGVRHCRYVDEVYREAPWFCTVEFLKNLK---------------------------- 166
Query: 163 YEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVST 222
+DFIAHD IPY++ D+Y + GMF+ T+RTEGVST
Sbjct: 167 --------------------VDFIAHDAIPYVAPGEEDLYEKFRREGMFLETERTEGVST 206
Query: 223 SDIVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGI 269
SD+V RI+RDYD YVRRNL RGY+ K+LNV FL + +++ D +
Sbjct: 207 SDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNKVDSL 253
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 52/69 (75%)
Query: 250 LNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGR 309
L ++ N R VR+YADGIYD+FH GH+ QL Q K +FPNVYLIVGVC D TH+ KGR
Sbjct: 69 LAMAEANEAGRPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGR 128
Query: 310 TVMNDEKKF 318
TV ++E+++
Sbjct: 129 TVTSEEERY 137
Score = 39.7 bits (91), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 65/296 (21%), Positives = 106/296 (35%), Gaps = 54/296 (18%)
Query: 120 DAPWETDDEFLAKHKES---TSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGK 176
D+P E D E K E S++ +PAPFSDE A+ R +Y ++IT A+ +
Sbjct: 17 DSPQEEDVEVKKKATEVEYVVRSLASDEPAPFSDEALAITTREAVDYSKKITLAMAEANE 76
Query: 177 GKAWERI------DFIAH---DDIPYMSEFGTDVYA-----------HLKARGMFVATQR 216
RI D H + + + + +VY K R + +R
Sbjct: 77 AGRPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEER 136
Query: 217 TEGVSTSDIVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQG 276
+GV V + R+ + K+L V F + + A G D++ +
Sbjct: 137 YDGVRHCRYVDEVYREAPWFCTVEF-----LKNLKVDF--IAHDAIPYVAPGEEDLYEKF 189
Query: 277 HSRQLMQAKNVFPNVYLIVGVCS-----DALTHRKKGRTVMNDE--------KKFRFQNK 323
+ V VC D R R E K++ QNK
Sbjct: 190 RREGMFLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQIQNK 249
Query: 324 IEEFKDRSKRVMENIGERRVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKG 379
++ K + ++++ W+ KS DII F+ F ++G L KG
Sbjct: 250 VDSLKSKG-----------IELLSTWKSKSDDIIRDFIDTFHKDGGLNAFGGRLKG 294
>sp|O74975|PCY1_SCHPO Probable choline-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPCC1827.02c PE=1 SV=3
Length = 362
Score = 204 bits (520), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 106/227 (46%), Positives = 131/227 (57%), Gaps = 48/227 (21%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R VRVYADG++D+FH GH RQL QAK VFPNV+LIVG+ +D LTHR KG TVMND ER E
Sbjct: 100 RPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAE 159
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
A+RHC++VDEV+ +APW EFL +HK
Sbjct: 160 ALRHCKWVDEVLENAPWVITPEFLEEHK-------------------------------- 187
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
IDF+AHDDIPY S+ D+Y +K G F+ T+RTEGVSTSD++
Sbjct: 188 ----------------IDFVAHDDIPYASDDSGDIYLPVKKVGKFIPTKRTEGVSTSDLI 231
Query: 227 ARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMF 273
RI+RDYD YV RNLARG K+LNVS +R + + D
Sbjct: 232 TRIIRDYDQYVMRNLARGVNRKELNVSLFKKNELDLRHHIKVLRDTL 278
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 5/92 (5%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKK-- 317
R VRVYADG++D+FH GH RQL QAK VFPNV+LIVG+ +D LTHR KG TVMND+++
Sbjct: 100 RPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAE 159
Query: 318 -FRFQNKIEEFKDRSKRVM--ENIGERRVDMI 346
R ++E + + V+ E + E ++D +
Sbjct: 160 ALRHCKWVDEVLENAPWVITPEFLEEHKIDFV 191
>sp|P13259|PCY1_YEAST Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCT1 PE=1 SV=2
Length = 424
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 128/232 (55%), Gaps = 48/232 (20%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R +R+YADG++D+FH GH +QL Q K FPNV LIVGV SD +TH+ KG TV+ D +R E
Sbjct: 102 RPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCE 161
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
+ HCR+VDEVV +APW EFL +HK
Sbjct: 162 TLTHCRWVDEVVPNAPWCVTPEFLLEHK-------------------------------- 189
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
ID++AHDDIPY+S D+Y +K G F+ TQRT GVSTSDI+
Sbjct: 190 ----------------IDYVAHDDIPYVSADSDDIYKPIKEMGKFLTTQRTNGVSTSDII 233
Query: 227 ARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHS 278
+I+RDYD Y+ RN ARG T ++LNVS+L + + + + F + +
Sbjct: 234 TKIIRDYDKYLMRNFARGATRQELNVSWLKKNELEFKKHINEFRSYFKKNQT 285
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 47/63 (74%)
Query: 255 LNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMND 314
L T R +R+YADG++D+FH GH +QL Q K FPNV LIVGV SD +TH+ KG TV+ D
Sbjct: 97 LPPTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTD 156
Query: 315 EKK 317
+++
Sbjct: 157 KQR 159
>sp|P49587|PCY1_PLAFK Choline-phosphate cytidylyltransferase OS=Plasmodium falciparum
(isolate K1 / Thailand) GN=CTP PE=2 SV=1
Length = 370
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 114/236 (48%), Gaps = 66/236 (27%)
Query: 46 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERY 105
S+ V +YADG+YDM H GH +QL QAK +F N LIVGV SD T KG+ V ER
Sbjct: 89 SKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEERT 148
Query: 106 EAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQ 165
E ++H R+VDE++ PW EFL K+K
Sbjct: 149 ETLKHIRWVDEIISPCPWVVTPEFLEKYK------------------------------- 177
Query: 166 RITYDDAKQGKGKAWERIDFIAHDDIPYMS------------------EFGTDVYAHLKA 207
ID++AHDDIPY + E D+YA LK
Sbjct: 178 -----------------IDYVAHDDIPYANNQKKKKKKKSKGKSFSFDEENEDIYAWLKR 220
Query: 208 RGMFVATQRTEGVSTSDIVARIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRKVR 263
G F ATQRTEGVST+D++ RI+++Y+ Y+ R+L RG +LN+ S K++
Sbjct: 221 AGKFKATQRTEGVSTTDLIVRILKNYEDYIERSLQRGIHPNELNIGVTKAQSIKMK 276
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 259 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKK 317
S+ V +YADG+YDM H GH +QL QAK +F N LIVGV SD T KG+ V E++
Sbjct: 89 SKNVVIYADGVYDMLHLGHMKQLEQAKKLFENTTLIVGVTSDNETKLFKGQVVQTLEER 147
>sp|Q55BZ4|PCY2_DICDI Ethanolamine-phosphate cytidylyltransferase OS=Dictyostelium
discoideum GN=pctA PE=1 SV=1
Length = 360
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 128/296 (43%), Gaps = 81/296 (27%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
+ +RVY DG +D+ H GH+ L QA+ + L+VGV +D + KG VMN+ ERY+
Sbjct: 8 KPIRVYVDGCFDLMHFGHANALRQAREL--GDILVVGVHTDEEIAKNKGPPVMNEQERYK 65
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
AVR C++ DEV AP+ +E+L + C
Sbjct: 66 AVRACKWADEVAEGAPYTLTEEYL--------------------------DSLNC----- 94
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
DF H + + G DVY +K G F +RTEGVST+++V
Sbjct: 95 -----------------DFCVHGEDISVGADGKDVYEGIKKSGKFRFIKRTEGVSTTELV 137
Query: 227 ARIV---RDYDIYVRRNLARGYTAKDLNV-----------SFLNVTSRKVR--------- 263
R++ +D+ V + NV FL T + V+
Sbjct: 138 GRMLLCTKDHLQNVSGEQTSPLGGVNPNVLHKQSPYTSLSHFLPTTRKIVQFSEGRSPKP 197
Query: 264 ----VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT--VMN 313
+Y DG +D+FH GH+ L QA+ + YLIVGV D + H +KG +MN
Sbjct: 198 NDKIIYMDGGFDLFHVGHTEALKQARAL--GDYLIVGVHDDRVVHEQKGSNFPIMN 251
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 92/205 (44%), Gaps = 56/205 (27%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT--VMNDIERYEAV 108
+Y DG +D+FH GH+ L QA+ + YLIVGV D + H +KG +MN ER +V
Sbjct: 202 IYMDGGFDLFHVGHTEALKQARAL--GDYLIVGVHDDRVVHEQKGSNFPIMNLHERVLSV 259
Query: 109 RHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRIT 168
CRYVDEVV AP+ S+TK D +++
Sbjct: 260 LSCRYVDEVVIGAPF-----------------SVTK-----DMIDSL------------- 284
Query: 169 YDDAKQGKGKAWERIDFIAH--DDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
I+ + H D + E G D Y + G++ + TEG++ ++IV
Sbjct: 285 -------------HINVVVHGDDQVVLGPEGGVDPYKLPRELGIYKEVKHTEGLTATEIV 331
Query: 227 ARIVRDYDIYVRRNLARGYTAKDLN 251
RI+ + Y RN R AK++N
Sbjct: 332 KRIIDNRLQYEARN--RKKEAKEIN 354
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFR 319
+ +RVY DG +D+ H GH+ L QA+ + L+VGV +D + KG VMN++++++
Sbjct: 8 KPIRVYVDGCFDLMHFGHANALRQAREL--GDILVVGVHTDEEIAKNKGPPVMNEQERYK 65
>sp|Q8SQW6|ECT1_ENCCU Probable ethanolamine-phosphate cytidylyltransferase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=MUQ1 PE=1
SV=1
Length = 322
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 123/264 (46%), Gaps = 64/264 (24%)
Query: 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR 109
+V+ADG +DMFH GH+ L Q+K + YLI GV S +++KG VM D ERYE V
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKAL--GDYLIAGVHSSLSINQEKGLPVMEDEERYEVVE 65
Query: 110 HCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITY 169
CRYVDEVVRDAP+ T + ++
Sbjct: 66 GCRYVDEVVRDAPFVTQTSMIKEYG----------------------------------- 90
Query: 170 DDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIVAR- 228
+ +AH + + G D Y ++ G+F +RT G+ST++IV R
Sbjct: 91 -------------VSIVAHGNDIVLDSSGQDSYCQVRRMGIFREVERTFGISTTEIVGRM 137
Query: 229 IVRDYDIYVRRNLARGYTAKD------LNVSFLNVTSRKVR---VYADGIYDMFHQGHSR 279
++++ ++ + G ++KD L F++ R+ R V+ DG +D+FH GH
Sbjct: 138 MLKNRGSWL--DGENGESSKDSGYHDRLLSLFMSSMGREKRGKVVFMDGNFDLFHAGHVA 195
Query: 280 QLMQAKNVFPNVYLIVGVCSDALT 303
L A+ + YLIVG+ D T
Sbjct: 196 SLRIARGM--GDYLIVGIHDDETT 217
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHR-KKGRTVMNDIERYEAVR 109
V+ DG +D+FH GH L A+ + YLIVG+ D T + V++ ER +
Sbjct: 180 VFMDGNFDLFHAGHVASLRIARGM--GDYLIVGIHDDETTKEYTRSYPVLSTKERMLTLM 237
Query: 110 HCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPA 146
CRYVDE+V +P+ EF+ +H I + P+
Sbjct: 238 ACRYVDEIVV-SPYLVGSEFIKRH-----GIDVVAPS 268
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 263 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKF 318
+V+ADG +DMFH GH+ L Q+K + YLI GV S +++KG VM DE+++
Sbjct: 8 KVWADGCFDMFHYGHANALRQSKAL--GDYLIAGVHSSLSINQEKGLPVMEDEERY 61
>sp|O88637|PCY2_RAT Ethanolamine-phosphate cytidylyltransferase OS=Rattus norvegicus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 122/315 (38%), Gaps = 98/315 (31%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R VRV+ DG YDM H GHS QL QA+ + YLIVGV +D + KG V ERY+
Sbjct: 21 RTVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
V+ ++VDEVV AP+ T E L KH
Sbjct: 79 MVQAIKWVDEVVPAAPYVTTLETLDKHN-------------------------------- 106
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
DF H + ++ G D Y +K G + +RT+GVST+D+V
Sbjct: 107 ----------------CDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLV 150
Query: 227 ARIV----------------RDY-DIY----------------VRRNLARGYTAKDLNVS 253
R++ R+Y D + V G +
Sbjct: 151 GRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSEVSSQCPGGQSPWTGVSQ 210
Query: 254 FLNVTSRKVR-------------VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSD 300
FL + + ++ +Y G +D+FH GH L + + Y+I G+ D
Sbjct: 211 FLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFD 270
Query: 301 ALTHRKKGRT--VMN 313
+R KG+ +MN
Sbjct: 271 QEVNRYKGKNYPIMN 285
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 72/193 (37%), Gaps = 51/193 (26%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT--VMNDIERYEAV 108
+Y G +D+FH GH L + + Y+I G+ D +R KG+ +MN ER +V
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 109 RHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRIT 168
CRYV EVV AP+ E L K
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHFK---------------------------------- 319
Query: 169 YDDAKQGKGKAWERIDFIAHDDIPYMSEF-GTDVYAHLKARGMFVATQRTEGVSTSDIVA 227
+D + H + + G+D Y K RG+F ++T IV
Sbjct: 320 --------------VDLVCHGKTEIVPDRDGSDPYEEPKRRGIFCQIDSGSDLTTDLIVQ 365
Query: 228 RIVRDYDIYVRRN 240
RI+++ Y RN
Sbjct: 366 RIIKNRLEYEARN 378
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFR 319
R VRV+ DG YDM H GHS QL QA+ + YLIVGV +D + KG V E++++
Sbjct: 21 RTVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 320 FQNKIE 325
I+
Sbjct: 79 MVQAIK 84
>sp|Q922E4|PCY2_MOUSE Ethanolamine-phosphate cytidylyltransferase OS=Mus musculus
GN=Pcyt2 PE=1 SV=1
Length = 404
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 122/315 (38%), Gaps = 98/315 (31%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R VRV+ DG YDM H GHS QL QA+ + YLIVGV +D + KG V ERY+
Sbjct: 21 RIVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
V+ ++VDEVV AP+ T E L KH
Sbjct: 79 MVQAIKWVDEVVPAAPYVTTLETLDKHN-------------------------------- 106
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
DF H + ++ G D Y +K G + +RT+GVST+D+V
Sbjct: 107 ----------------CDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLV 150
Query: 227 ARIV----------------RDY-DIY----------------VRRNLARGYTAKDLNVS 253
R++ R+Y D + V G +
Sbjct: 151 GRMLLVTKAHHSSQEMSSEYREYADSFGKPPHPTPAGDTLSSEVSSQCPGGQSPWTGVSQ 210
Query: 254 FLNVTSRKVR-------------VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSD 300
FL + + ++ +Y G +D+FH GH L + + Y+I G+ D
Sbjct: 211 FLQTSQKIIQFASGKEPQPGETVIYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFD 270
Query: 301 ALTHRKKGR--TVMN 313
+R KG+ +MN
Sbjct: 271 QEVNRYKGKNYPIMN 285
Score = 58.9 bits (141), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 83/214 (38%), Gaps = 55/214 (25%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGR--TVMNDIERYEAV 108
+Y G +D+FH GH L + + Y+I G+ D +R KG+ +MN ER +V
Sbjct: 234 IYVAGAFDLFHIGHVDFLQEVHKLAKRPYVIAGLHFDQEVNRYKGKNYPIMNLHERTLSV 293
Query: 109 RHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRIT 168
CRYV EVV AP+ E L K
Sbjct: 294 LACRYVSEVVIGAPYSVTAELLNHFK---------------------------------- 319
Query: 169 YDDAKQGKGKAWERIDFIAHDDIPYMSEF-GTDVYAHLKARGMFVATQRTEGVSTSDIVA 227
+D + H + + G+D Y K RG+F ++T IV
Sbjct: 320 --------------VDLVCHGKTEIVPDRDGSDPYQEPKRRGIFYQIDSGSDLTTDLIVQ 365
Query: 228 RIVRDYDIYVRRNLARGYTAKDLNVSFLNVTSRK 261
RI+++ Y RN + AK+L +FL T ++
Sbjct: 366 RIIKNRLEYEARNQKK--EAKEL--AFLEATKQQ 395
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFR 319
R VRV+ DG YDM H GHS QL QA+ + YLIVGV +D + KG V E++++
Sbjct: 21 RIVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 320 FQNKIE 325
I+
Sbjct: 79 MVQAIK 84
>sp|Q99447|PCY2_HUMAN Ethanolamine-phosphate cytidylyltransferase OS=Homo sapiens
GN=PCYT2 PE=1 SV=1
Length = 389
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 123/303 (40%), Gaps = 92/303 (30%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
R VRV+ DG YDM H GHS QL QA+ + YLIVGV +D + KG V ERY+
Sbjct: 21 RAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQR 166
V+ ++VDEVV AP+ T E L K+
Sbjct: 79 MVQAIKWVDEVVPAAPYVTTLETLDKYN-------------------------------- 106
Query: 167 ITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIV 226
DF H + ++ G D Y +K G + +RT+GVST+D+V
Sbjct: 107 ----------------CDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTDLV 150
Query: 227 ARIV----------------RDY-DIYVR----RNLARGYTAKDLNVSFLNVTSRKVR-- 263
R++ R+Y D + + RN G + FL + + ++
Sbjct: 151 GRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGVS------QFLQTSQKIIQFA 204
Query: 264 -----------VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT-- 310
+Y G +D+FH GH L + + Y+I G+ D + KG+
Sbjct: 205 SGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYP 264
Query: 311 VMN 313
+MN
Sbjct: 265 IMN 267
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFR 319
R VRV+ DG YDM H GHS QL QA+ + YLIVGV +D + KG V E++++
Sbjct: 21 RAVRVWCDGCYDMVHYGHSNQLRQARAM--GDYLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 320 FQNKIE 325
I+
Sbjct: 79 MVQAIK 84
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT--VMNDIERYEAV 108
+Y G +D+FH GH L + + Y+I G+ D + KG+ +MN ER +V
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVHRLAERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 109 RHCRYVDEVVRDAPWETDDEFLAKHK 134
CRYV EVV AP+ E L+ K
Sbjct: 276 LACRYVSEVVIGAPYAVTAELLSHFK 301
>sp|Q5EA75|PCY2_BOVIN Ethanolamine-phosphate cytidylyltransferase OS=Bos taurus GN=PCYT2
PE=2 SV=1
Length = 389
Score = 88.6 bits (218), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 124/305 (40%), Gaps = 92/305 (30%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIER 104
A R VRV+ DG YDM H GHS QL QA+ + +LIVGV +D + KG V ER
Sbjct: 19 ARRAVRVWCDGCYDMVHYGHSNQLRQARAM--GDHLIVGVHTDEEIAKHKGPPVFTQEER 76
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYE 164
Y+ V+ ++VDEVV AP+ T E L K+
Sbjct: 77 YKMVQAIKWVDEVVPAAPYVTTLETLDKYN------------------------------ 106
Query: 165 QRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSD 224
DF H + ++ G D Y +K G + +RT+GVST+D
Sbjct: 107 ------------------CDFCVHGNDITLTVDGRDTYEEVKQAGRYRECKRTQGVSTTD 148
Query: 225 IVARIV----------------RDY-DIYVR----RNLARGYTAKDLNVSFLNVTSRKVR 263
+V R++ R+Y D + + RN G + FL + + ++
Sbjct: 149 LVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGVS------QFLQTSQKIIQ 202
Query: 264 -------------VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT 310
+Y G +D+FH GH L + + Y+I G+ D + KG+
Sbjct: 203 FASGKEPQPGETVIYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKN 262
Query: 311 --VMN 313
+MN
Sbjct: 263 YPIMN 267
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT--VMNDIERYEAV 108
+Y G +D+FH GH L + + Y+I G+ D + KG+ +MN ER +V
Sbjct: 216 IYVAGAFDLFHIGHVDFLEKVYGLAERPYVIAGLHFDQEVNHYKGKNYPIMNLHERTLSV 275
Query: 109 RHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEE 157
CRYV EVV AP+ E L K T+ P D + EE
Sbjct: 276 LACRYVSEVVIGAPYSVTAELLDHFKVDLVCHGKTEVVPDKDGSDPYEE 324
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFR 319
R VRV+ DG YDM H GHS QL QA+ + +LIVGV +D + KG V E++++
Sbjct: 21 RAVRVWCDGCYDMVHYGHSNQLRQARAM--GDHLIVGVHTDEEIAKHKGPPVFTQEERYK 78
Query: 320 FQNKIE 325
I+
Sbjct: 79 MVQAIK 84
>sp|P33412|ECT1_YEAST Ethanolamine-phosphate cytidylyltransferase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECT1 PE=1
SV=1
Length = 323
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 108/280 (38%), Gaps = 86/280 (30%)
Query: 50 RVYADGIYDMFHQGHSRQLMQAKNVFP--NVYLIVGVCSDALTHRKKGRTVMNDIERYEA 107
+V+ DG +D H GH+ ++QA+ N L GV +D KG VMN ERYE
Sbjct: 9 KVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERYEH 68
Query: 108 VRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRI 167
R R+ EVV AP+ TD ++ K+ QC Y
Sbjct: 69 TRSNRWCSEVVEAAPYVTDPNWMDKY--------------------------QCQY---- 98
Query: 168 TYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVSTSDIVA 227
+ H D + G D Y +K G F +RT GVST++I+
Sbjct: 99 ------------------VVHGDDITIDANGEDCYKLVKEMGRFKVVKRTYGVSTTEIIH 140
Query: 228 RIVRDYDIYVRRNLARG---YTAKDLNVSFLNVTSRKVR--------------------- 263
RI+ +++L Y +SF +V V
Sbjct: 141 RIL------TKKSLPPTHPDYYPTTQELSFYSVAQDAVSKHCYVFQRDLDNVLVNGGYKF 194
Query: 264 -----VYADGIYDMFHQGHSRQLMQAK-NVFPNVYLIVGV 297
VY DG +D+FH G QL + K ++ P+ LIVG+
Sbjct: 195 DAEDCVYVDGDFDLFHMGDIDQLRKLKMDLHPDKKLIVGI 234
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 21 DSMGDHIPSLNNGVDEALFHDNNNASRKVRVYADGIYDMFHQGHSRQLMQAK-NVFPNVY 79
D++ H +D L + + VY DG +D+FH G QL + K ++ P+
Sbjct: 170 DAVSKHCYVFQRDLDNVLVNGGYKFDAEDCVYVDGDFDLFHMGDIDQLRKLKMDLHPDKK 229
Query: 80 LIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDA 121
LIVG+ T T+M ER +V C+YVD V+ DA
Sbjct: 230 LIVGI-----TTSDYSSTIMTMKERVLSVLSCKYVDAVIIDA 266
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 263 RVYADGIYDMFHQGHSRQLMQAKNVFP--NVYLIVGVCSDALTHRKKGRTVMNDEKKF 318
+V+ DG +D H GH+ ++QA+ N L GV +D KG VMN +++
Sbjct: 9 KVWIDGCFDFTHHGHAGAILQARRTVSKENGKLFCGVHTDEDIQHNKGTPVMNSSERY 66
>sp|Q9UTI6|ECT1_SCHPO Probable ethanolamine-phosphate cytidylyltransferase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC15E1.05c PE=2 SV=1
Length = 365
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 110/289 (38%), Gaps = 81/289 (28%)
Query: 43 NNASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDI 102
++++ K R++ DG D FH GHS ++QAK + L++G+ SD KG VM
Sbjct: 3 SSSNIKHRLWLDGCMDFFHYGHSNAILQAKQL--GETLVIGIHSDEEITLNKGPPVMTLE 60
Query: 103 ERYEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCN 162
ER + C++VDEVV AP+ D E++ R C
Sbjct: 61 ERCLSANTCKWVDEVVPSAPYVFDLEWM--------------------------RRYGCQ 94
Query: 163 YEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKARGMFVATQRTEGVST 222
Y + H D G D Y KA ++ +RTEGVST
Sbjct: 95 Y----------------------VVHGDDISTDANGDDCYRFAKAADQYLEVKRTEGVST 132
Query: 223 SDIVARIVRDYDIYVRRN-----------LARGYTAKDLNVSF----------------- 254
++++ R++ + + L R T D F
Sbjct: 133 TELLDRLLSSVPLEIYSTPVSVLSSQIDLLRRFATDSDGLTPFTDVFIYNTEKPETLISG 192
Query: 255 ---LNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSD 300
L + K +Y DG +D+F + H L +FP + ++ G+ +D
Sbjct: 193 TTLLRLNPEKNIIYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIFAD 241
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH 110
+Y DG +D+F + H L +FP + ++ G+ +D K ++N +ER +
Sbjct: 205 IYIDGDWDLFTEKHISALELCTRMFPGIPIMAGIFADEKCFEKP---MLNLLERILNLLQ 261
Query: 111 CRYVDEVVRDAP 122
C+Y+ ++ P
Sbjct: 262 CKYISSILVGPP 273
Score = 42.4 bits (98), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKK 317
K R++ DG D FH GHS ++QAK + L++G+ SD KG VM E++
Sbjct: 8 KHRLWLDGCMDFFHYGHSNAILQAKQL--GETLVIGIHSDEEITLNKGPPVMTLEER 62
>sp|Q9UZ37|RIBL_PYRAB FAD synthase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=ribL PE=3
SV=1
Length = 148
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIE- 103
+R++RV G++D+ H GH L AK + LIV V D ++KGR +N E
Sbjct: 3 GNRRIRVVVGGVFDILHVGHIHFLKMAKELGDE--LIVIVAHDETVKKRKGRPPINPAED 60
Query: 104 RYEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSIS 141
R E +R RYVD+VV P E E + K K ++
Sbjct: 61 RAEVLRAIRYVDDVVIGEPGEISLELIKKLKPDVIALG 98
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 259 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMN 313
+R++RV G++D+ H GH L AK + LIV V D ++KGR +N
Sbjct: 4 NRRIRVVVGGVFDILHVGHIHFLKMAKELGDE--LIVIVAHDETVKKRKGRPPIN 56
>sp|O58466|RIBL_PYRHO FAD synthase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=ribL PE=3 SV=1
Length = 148
Score = 55.5 bits (132), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 44 NASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIE 103
+ RK+RV G++D+ H GH L AK + LIV V D ++KGR +N E
Sbjct: 2 GSDRKIRVVVGGVFDIIHAGHVHFLKMAKELGDE--LIVIVAHDETVKKRKGRPPINPAE 59
Query: 104 -RYEAVRHCRYVDEVVRDAPWETDDEFLAKHKESTSSIS 141
R E ++ RYVD+VV P E + + + K ++
Sbjct: 60 DRAEVLKAIRYVDDVVIGKPGEISLDLIKRLKPDVIALG 98
Score = 39.7 bits (91), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 258 TSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMN 313
+ RK+RV G++D+ H GH L AK + LIV V D ++KGR +N
Sbjct: 3 SDRKIRVVVGGVFDIIHAGHVHFLKMAKELGDE--LIVIVAHDETVKKRKGRPPIN 56
>sp|C5A1S7|RIBL_THEGJ FAD synthase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM
11827 / EJ3) GN=ribL PE=3 SV=1
Length = 151
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 46 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIE-R 104
RK+RV G++D+ H GH L QAK + L+V V D R K R +N E R
Sbjct: 7 GRKIRVLVGGVFDILHVGHVHFLKQAKELGDE--LVVIVAHDETVRRNKRRNPINPAEDR 64
Query: 105 YEAVRHCRYVDEVVRDAPWETDDEFL 130
E +R RYVDEV +P D E +
Sbjct: 65 AELLRAIRYVDEVYIGSPGGIDFELV 90
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 259 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMN 313
RK+RV G++D+ H GH L QAK + L+V V D R K R +N
Sbjct: 7 GRKIRVLVGGVFDILHVGHVHFLKQAKELGDE--LVVIVAHDETVRRNKRRNPIN 59
>sp|Q5JHT4|RIBL_PYRKO FAD synthase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM
12380 / KOD1) GN=ribL PE=3 SV=1
Length = 149
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIE-RY 105
+K+RV G++D+ H GH L QAK + L+V V D +K R +N E R
Sbjct: 6 KKIRVLVGGVFDILHVGHIHFLKQAKELGDE--LVVIVAHDETVRMQKRREPINPAEDRA 63
Query: 106 EAVRHCRYVDEVVRDAPWETDDEFLAK 132
E +R RYVDEV P D E + +
Sbjct: 64 ELLRAIRYVDEVYIGTPGTIDMELVKR 90
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMN 313
+K+RV G++D+ H GH L QAK + L+V V D +K R +N
Sbjct: 6 KKIRVLVGGVFDILHVGHIHFLKQAKELGDE--LVVIVAHDETVRMQKRREPIN 57
>sp|C6A439|RIBL_THESM FAD synthase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597)
GN=ribL PE=3 SV=1
Length = 148
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDI-ERY 105
+K+RV G++D+ H GH L QAK + L+V V D +KGR +N + ER
Sbjct: 5 KKIRVVTGGVFDILHVGHIHFLKQAKELGDE--LVVIVAHDKTVEERKGRRPINSMYERA 62
Query: 106 EAVRHCRYVDEVVRDAP 122
E ++ + VDEVV P
Sbjct: 63 EVLKALKMVDEVVIGEP 79
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMN 313
+K+RV G++D+ H GH L QAK + L+V V D +KGR +N
Sbjct: 5 KKIRVVTGGVFDILHVGHIHFLKQAKELGDE--LVVIVAHDKTVEERKGRRPIN 56
>sp|B6YXC8|RIBL_THEON FAD synthase OS=Thermococcus onnurineus (strain NA1) GN=ribL PE=3
SV=1
Length = 150
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIE-RY 105
+K+RV A G++D+ H GH L QAK++ L+V V D +K R +N E R
Sbjct: 7 KKIRVLAGGVFDLLHVGHIHFLSQAKSLGDE--LVVIVAHDETVRMQKRREPVNPAEDRA 64
Query: 106 EAVRHCRYVDEVVRDAPWETDDEFLAK 132
E +R + VDEV +P D E + K
Sbjct: 65 ELLRALKMVDEVYIGSPGTIDYELVRK 91
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMN 313
+K+RV A G++D+ H GH L QAK++ L+V V D +K R +N
Sbjct: 7 KKIRVLAGGVFDLLHVGHIHFLSQAKSLGDE--LVVIVAHDETVRMQKRREPVN 58
>sp|A7GZF6|HLDE_CAMC5 Bifunctional protein HldE OS=Campylobacter curvus (strain 525.92)
GN=hldE PE=3 SV=1
Length = 468
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 7/79 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H GH+R L +A++ F ++ LIVG+ SDA R KG R + + ++R +
Sbjct: 339 VFTNGCFDILHAGHARYLAKARD-FGDI-LIVGLNSDASVRRLKGESRPINSQLDRACVL 396
Query: 109 RHCRYVDEVV---RDAPWE 124
+VD VV D P E
Sbjct: 397 SGLGFVDYVVIFDEDTPME 415
Score = 40.8 bits (94), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT 310
V+ +G +D+ H GH+R L +A++ F ++ LIVG+ SDA R KG +
Sbjct: 339 VFTNGCFDILHAGHARYLAKARD-FGDI-LIVGLNSDASVRRLKGES 383
>sp|Q8U1T9|RIBL_PYRFU FAD synthase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 /
JCM 8422 / Vc1) GN=ribL PE=3 SV=1
Length = 148
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 57 YDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIE-RYEAVRHCRYVD 115
+D+ H GH L AK + LIV V D R+KGR +N E R E ++ RYVD
Sbjct: 15 FDILHVGHVHFLKMAKELGDE--LIVIVAHDETVKRRKGRPPINPAEDRAELLKSIRYVD 72
Query: 116 EVVRDAPWETDDEFLAKHKESTSSIS 141
+VV P E + + + K ++
Sbjct: 73 DVVIGEPGEISIDLIKRLKPDVIALG 98
>sp|P27623|TAGD_BACSU Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
(strain 168) GN=tagD PE=1 SV=1
Length = 129
Score = 43.5 bits (101), Expect = 0.003, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYE 106
+KV Y G +D+ H GH + L +AK + YL+V + +D +K+ + + R
Sbjct: 2 KKVITY--GTFDLLHWGHIKLLERAKQL--GDYLVVAISTDEFNLQKQKKAYHSYEHRKL 57
Query: 107 AVRHCRYVDEVVRDAPWETDDEFLAKH 133
+ RYVDEV+ + WE + + H
Sbjct: 58 ILETIRYVDEVIPEKNWEQKKQDIIDH 84
Score = 38.5 bits (88), Expect = 0.085, Method: Composition-based stats.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 28/127 (22%)
Query: 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFR 319
+KV Y G +D+ H GH + L +AK + YL+V + +D +K+ + + E +
Sbjct: 2 KKVITY--GTFDLLHWGHIKLLERAKQL--GDYLVVAISTDEFNLQKQKKAYHSYEHR-- 55
Query: 320 FQNKIEEFKDRSKRVMENIGERRVDMI---QKWEEKSRDIIDTFLLLFGREGRLKHMWNE 376
K ++E I R VD + + WE+K +DIID + +F + W E
Sbjct: 56 ------------KLILETI--RYVDEVIPEKNWEQKKQDIIDHNIDVF----VMGDDW-E 96
Query: 377 GKGKFLQ 383
GK FL+
Sbjct: 97 GKFDFLK 103
>sp|Q8RKI6|TARD_BACPZ Glycerol-3-phosphate cytidylyltransferase OS=Bacillus subtilis
subsp. spizizenii (strain ATCC 23059 / NRRL B-14472 /
W23) GN=tarD PE=3 SV=1
Length = 129
Score = 42.7 bits (99), Expect = 0.004, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR 109
+V G +D+FH GH + L +AKN+ YLIVG+ +D +K+ ++ + R +
Sbjct: 3 KVITYGTFDLFHYGHMKLLERAKNL--GDYLIVGLSTDEFNLQKQKKSHHSYEHRKFILE 60
Query: 110 HCRYVDEVVRDAPWETDDEFLAKHKEST 137
V+EV+ + WE + KH T
Sbjct: 61 TIDLVNEVIPEKNWEQKISDIQKHDIDT 88
Score = 39.7 bits (91), Expect = 0.045, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 19/104 (18%)
Query: 263 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322
+V G +D+FH GH + L +AKN+ YLIVG+ +D +K+ ++ + +
Sbjct: 3 KVITYGTFDLFHYGHMKLLERAKNL--GDYLIVGLSTDEFNLQKQKKS----HHSYEHRK 56
Query: 323 KIEEFKDRSKRVMENIGERRVDMIQKWEEKSRDI----IDTFLL 362
I E D V+ + WE+K DI IDTF++
Sbjct: 57 FILETIDLVNEVIPE---------KNWEQKISDIQKHDIDTFVI 91
>sp|Q2W993|HLDE_MAGSA Bifunctional protein HldE OS=Magnetospirillum magneticum (strain
AMB-1 / ATCC 700264) GN=hldE PE=3 SV=1
Length = 488
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 52 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAVR 109
+ +G +D+ H GH L QAK L+VG+ SDA R KG R V ++ R +
Sbjct: 358 FTNGCFDLLHPGHVSILAQAKGACDK--LVVGLNSDASVQRLKGPTRPVQSEASRATVLS 415
Query: 110 HCRYVDEVV---RDAPWET 125
VD VV D P E
Sbjct: 416 SLATVDLVVIFGEDTPLEV 434
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 265 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT 310
+ +G +D+ H GH L QAK L+VG+ SDA R KG T
Sbjct: 358 FTNGCFDLLHPGHVSILAQAKGACDK--LVVGLNSDASVQRLKGPT 401
>sp|A6Q4Z6|HLDE_NITSB Bifunctional protein HldE OS=Nitratiruptor sp. (strain SB155-2)
GN=hldE PE=3 SV=1
Length = 462
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H GH + L +AK + LIVGV SDA R KG R + +R +
Sbjct: 335 VFTNGCFDILHLGHVKYLQKAKEL--GDVLIVGVNSDASVKRLKGDDRPINPQFDRAYLL 392
Query: 109 RHCRYVDEVV---RDAPWE 124
VD VV D P+E
Sbjct: 393 ASLEAVDYVVIFEEDTPYE 411
Score = 38.9 bits (89), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V+ +G +D+ H GH + L +AK + LIVGV SDA R KG
Sbjct: 335 VFTNGCFDILHLGHVKYLQKAKEL--GDVLIVGVNSDASVKRLKG 377
>sp|A1TYR4|HLDE_MARAV Bifunctional protein HldE OS=Marinobacter aquaeolei (strain ATCC
700491 / DSM 11845 / VT8) GN=hldE PE=3 SV=1
Length = 481
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 34 VDEALFHDNNNASRKVR-VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHR 92
V+++L H + + R V+ +G +D+ H GH R L QA+ + L+VG+ SDA R
Sbjct: 328 VEQSLLHIDYARQQGERIVFTNGCFDILHAGHVRYLAQARALGDR--LVVGLNSDASVRR 385
Query: 93 KKG--RTVMNDIERYEAVRHCRYVDEVV 118
KG R V + +R E + VD V+
Sbjct: 386 LKGEERPVNSLEDRMEVLSALACVDWVI 413
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V+ +G +D+ H GH R L QA+ + L+VG+ SDA R KG
Sbjct: 346 VFTNGCFDILHAGHVRYLAQARALGDR--LVVGLNSDASVRRLKG 388
>sp|Q3A526|HLDE_PELCD Bifunctional protein HldE OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=hldE PE=3 SV=1
Length = 490
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERY 105
K V+ +G +D+ H GH + L +A+ + L++G+ SDA R KG R ++++ ER
Sbjct: 352 KTVVFTNGCFDLLHVGHVKYLQKARRL--GDLLVLGLNSDASIRRLKGPSRPLISEQERA 409
Query: 106 EAVRHCRYVDEVV---RDAPWETDDEF 129
+ +D VV D P E D
Sbjct: 410 HILAALSCIDYVVVFDEDTPLELIDTL 436
Score = 35.4 bits (80), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
K V+ +G +D+ H GH + L +A+ + L++G+ SDA R KG
Sbjct: 352 KTVVFTNGCFDLLHVGHVKYLQKARRL--GDLLVLGLNSDASIRRLKG 397
>sp|A1AV12|HLDE_PELPD Bifunctional protein HldE OS=Pelobacter propionicus (strain DSM
2379) GN=hldE PE=3 SV=1
Length = 488
Score = 41.2 bits (95), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 37 ALFHDNNNASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG- 95
A+ + A K V+ +G +D+ H GH + L +A+ + L++G+ SDA R KG
Sbjct: 341 AVLIEAEKARGKRIVFTNGCFDLLHAGHVKYLQKARTL--GDLLVLGLNSDASVRRLKGE 398
Query: 96 -RTVMNDIERYEAVRHCRYVDEVV---RDAPWE 124
R ++ + ER + +D VV D P E
Sbjct: 399 KRPLIGEQERAHILAALDCIDYVVIFEEDTPLE 431
Score = 35.8 bits (81), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V+ +G +D+ H GH + L +A+ + L++G+ SDA R KG
Sbjct: 355 VFTNGCFDLLHAGHVKYLQKARTL--GDLLVLGLNSDASVRRLKG 397
>sp|Q5HTW1|HLDE_CAMJR Bifunctional protein HldE OS=Campylobacter jejuni (strain RM1221)
GN=hldE PE=3 SV=1
Length = 461
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H GH + L +AK + LIVG+ SDA R KG R V ++ +R +
Sbjct: 333 VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGLNSDASVKRLKGESRPVNSEFQRACML 390
Query: 109 RHCRYVDEVV---RDAPWE 124
+VD VV D P E
Sbjct: 391 AAFYFVDFVVIFDEDTPLE 409
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 252 VSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT 310
++ L +K+ V+ +G +D+ H GH + L +AK + LIVG+ SDA R KG +
Sbjct: 322 LTLLKQNDKKI-VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGLNSDASVKRLKGES 377
>sp|A8FMK8|HLDE_CAMJ8 Bifunctional protein HldE OS=Campylobacter jejuni subsp. jejuni
serotype O:6 (strain 81116 / NCTC 11828) GN=hldE PE=3
SV=1
Length = 461
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H GH + L +AK + LIVG+ SDA R KG R V ++ +R +
Sbjct: 333 VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGLNSDASVKRLKGESRPVNSEFQRACML 390
Query: 109 RHCRYVDEVV---RDAPWE 124
+VD VV D P E
Sbjct: 391 AAFYFVDFVVIFDEDTPLE 409
Score = 37.0 bits (84), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 238 RRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGV 297
R + + +K+ ++ L +K+ V+ +G +D+ H GH + L +AK + LIVG+
Sbjct: 308 RVDFEKKIKSKEELLTLLKQNDKKI-VFTNGCFDIVHFGHIKYLEKAKRL--GDVLIVGL 364
Query: 298 CSDALTHRKKGRT 310
SDA R KG +
Sbjct: 365 NSDASVKRLKGES 377
>sp|B5Z7L8|HLDE_HELPG Bifunctional protein HldE OS=Helicobacter pylori (strain G27)
GN=hldE PE=3 SV=1
Length = 463
Score = 41.2 bits (95), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H+GH+ L +AK + LIVG+ SDA R KG R ++++ +R +
Sbjct: 333 VFTNGCFDLLHKGHASYLQKAKAL--GDILIVGLNSDASVKRLKGDKRPIVSEKDRAFLL 390
Query: 109 RHCRYVDEVV---RDAPWE 124
VD VV D P +
Sbjct: 391 ASLSCVDYVVVFEEDTPIQ 409
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V+ +G +D+ H+GH+ L +AK + LIVG+ SDA R KG
Sbjct: 333 VFTNGCFDLLHKGHASYLQKAKAL--GDILIVGLNSDASVKRLKG 375
>sp|Q6TG09|HLDE_CAMJE Bifunctional protein HldE OS=Campylobacter jejuni subsp. jejuni
serotype O:2 (strain NCTC 11168) GN=hldE PE=3 SV=2
Length = 461
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 37 ALFHDNNNASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG- 95
L NN +K+ V+ +G +D+ H GH + L +AK + LIVG+ SDA R KG
Sbjct: 323 VLLKQNN---KKI-VFTNGCFDIVHFGHIKYLDKAKRL--GDVLIVGLNSDASVKRLKGE 376
Query: 96 -RTVMNDIERYEAVRHCRYVDEVV---RDAPWE 124
R V ++ +R + +VD VV D P E
Sbjct: 377 SRPVNSEFQRACMLAAFYFVDFVVIFDEDTPLE 409
Score = 35.8 bits (81), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 236 YVRRNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIV 295
+ R + + +K+ + L ++K+ V+ +G +D+ H GH + L +AK + LIV
Sbjct: 306 FKRVDFEKKIKSKEELLVLLKQNNKKI-VFTNGCFDIVHFGHIKYLDKAKRL--GDVLIV 362
Query: 296 GVCSDALTHRKKGRT 310
G+ SDA R KG +
Sbjct: 363 GLNSDASVKRLKGES 377
>sp|E3GWN9|RIBL_METFV FAD synthase OS=Methanothermus fervidus (strain ATCC 43054 / DSM
2088 / JCM 10308 / V24 S) GN=ribL PE=3 SV=1
Length = 145
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 53 ADGIYDMFHQGHSRQLMQAKNVF-PNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHC 111
A G +D+ H GH L +AK + N L+V V D+ +K + V+N+ +R E V+
Sbjct: 2 ATGTFDIIHPGHGFYLKKAKELGGKNSKLVVIVARDSTVRARKRKPVINEKQRLEVVKML 61
Query: 112 RYVDE 116
+ VDE
Sbjct: 62 KPVDE 66
>sp|A5G6F4|HLDE_GEOUR Bifunctional protein HldE OS=Geobacter uraniireducens (strain Rf4)
GN=hldE PE=3 SV=1
Length = 490
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H GH + L +A+ F ++ L+VG+ SDA R KG R ++ + ER +
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKART-FGDL-LVVGLNSDASVRRLKGAERPLIGEAERAHIL 412
Query: 109 RHCRYVDEVV---RDAPW 123
VD VV D P
Sbjct: 413 AALDCVDFVVIFDEDTPL 430
Score = 39.7 bits (91), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 196 EFGTDVYAHLKARGMFVATQRTEGVSTSDIVARIVR---DYDIYVRRNLARGYTAKDLNV 252
EFG A G+ V T VS +I+A I D D + K+L+
Sbjct: 290 EFGEAARVANVAAGIAVGKLGTSTVSPGEIIAEIGHAHPDSDAKI----------KNLDA 339
Query: 253 SFLNVTSRKVR----VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V + K R V+ +G +D+ H GH + L +A+ F ++ L+VG+ SDA R KG
Sbjct: 340 LAAIVKAEKTRGKRLVFTNGCFDLLHVGHVKYLQKART-FGDL-LVVGLNSDASVRRLKG 397
>sp|Q39X60|HLDE_GEOMG Bifunctional protein HldE OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=hldE PE=3 SV=1
Length = 490
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H GH + L +AK+ + +V L++G+ SDA R KG R ++++ ER +
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKAKS-YGDV-LVLGLNSDASVRRLKGEKRPLIDEAERAHIL 412
Query: 109 RHCRYVDEVV 118
+D VV
Sbjct: 413 AALDCIDYVV 422
Score = 36.2 bits (82), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V+ +G +D+ H GH + L +AK+ + +V L++G+ SDA R KG
Sbjct: 355 VFTNGCFDLLHVGHVKYLQKAKS-YGDV-LVLGLNSDASVRRLKG 397
>sp|B0T663|HLDE_CAUSK Bifunctional protein HldE OS=Caulobacter sp. (strain K31) GN=hldE
PE=3 SV=1
Length = 488
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 46 SRKVRV-YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDI 102
+R ++V + +G +D+ H GH L QAK LIVG+ +DA R KG R V +
Sbjct: 347 ARGLKVGFTNGCFDLLHPGHVSLLAQAKAACDR--LIVGLNTDASVQRLKGPTRPVQKET 404
Query: 103 ERYEAVRHCRYVDEVV 118
R + VD VV
Sbjct: 405 GRATVLASLSAVDLVV 420
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 244 GYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALT 303
G+ A+ L V F N G +D+ H GH L QAK LIVG+ +DA
Sbjct: 344 GWRARGLKVGFTN-----------GCFDLLHPGHVSLLAQAKAACDR--LIVGLNTDASV 390
Query: 304 HRKKGRT 310
R KG T
Sbjct: 391 QRLKGPT 397
>sp|Q2IZP7|HLDE_RHOP2 Bifunctional protein HldE OS=Rhodopseudomonas palustris (strain
HaA2) GN=hldE PE=3 SV=1
Length = 490
Score = 40.0 bits (92), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 52 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAVR 109
+ +G +D+ H GH + L A+ LIVG+ SDA R KG R V N+ R E +
Sbjct: 358 FTNGCFDILHPGHVKVLTAARGACDR--LIVGLNSDASVRRLKGESRPVQNERARAEVLA 415
Query: 110 HCRYVDEV 117
VD V
Sbjct: 416 ALEAVDLV 423
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 265 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDEKKFRFQN 322
+ +G +D+ H GH + L A+ LIVG+ SDA R KG R V N+ +
Sbjct: 358 FTNGCFDILHPGHVKVLTAARGACDR--LIVGLNSDASVRRLKGESRPVQNERARAEVLA 415
Query: 323 KIE 325
+E
Sbjct: 416 ALE 418
>sp|Q13AN7|HLDE_RHOPS Bifunctional protein HldE OS=Rhodopseudomonas palustris (strain
BisB5) GN=hldE PE=3 SV=1
Length = 490
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 52 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAVR 109
+ +G +D+ H GH + L A+ LIVG+ SDA R KG R V N+ R E +
Sbjct: 358 FTNGCFDILHPGHVKVLTAARGACDR--LIVGLNSDASVRRLKGESRPVQNERARAEVLA 415
Query: 110 HCRYVDEV 117
VD V
Sbjct: 416 ALEAVDLV 423
Score = 36.6 bits (83), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 265 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDEKKFRFQN 322
+ +G +D+ H GH + L A+ LIVG+ SDA R KG R V N+ +
Sbjct: 358 FTNGCFDILHPGHVKVLTAARGACDR--LIVGLNSDASVRRLKGESRPVQNERARAEVLA 415
Query: 323 KIE 325
+E
Sbjct: 416 ALE 418
>sp|O25529|HLDE_HELPY Bifunctional protein HldE OS=Helicobacter pylori (strain ATCC
700392 / 26695) GN=hldE PE=3 SV=1
Length = 461
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
++ +G +D+ H+GH+ L +AK + LIVG+ SDA R KG R ++++ +R +
Sbjct: 331 IFTNGCFDLLHKGHASYLQKAKAL--GDILIVGLNSDASIKRLKGDKRPIVSEKDRAFLL 388
Query: 109 RHCRYVDEVV---RDAP 122
VD VV D P
Sbjct: 389 ASLSCVDYVVVFEEDTP 405
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 254 FLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
L ++ ++ +G +D+ H+GH+ L +AK + LIVG+ SDA R KG
Sbjct: 321 LLETLDQQKIIFTNGCFDLLHKGHASYLQKAKAL--GDILIVGLNSDASIKRLKG 373
>sp|B2USX2|HLDE_HELPS Bifunctional protein HldE OS=Helicobacter pylori (strain Shi470)
GN=hldE PE=3 SV=1
Length = 463
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAV 108
V+ +G +D+ H+GH+ L +AK + LIVG+ SDA R KG R ++++ +R +
Sbjct: 333 VFTNGCFDILHKGHASYLQKAKAL--GDILIVGLNSDASVKRLKGDKRPIVSEKDRAFLL 390
Query: 109 RHCRYVDEVV---RDAP 122
VD VV D P
Sbjct: 391 ASLSCVDYVVVFEEDTP 407
Score = 37.7 bits (86), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG 308
V+ +G +D+ H+GH+ L +AK + LIVG+ SDA R KG
Sbjct: 333 VFTNGCFDILHKGHASYLQKAKAL--GDILIVGLNSDASVKRLKG 375
>sp|Q219E2|HLDE_RHOPB Bifunctional protein HldE OS=Rhodopseudomonas palustris (strain
BisB18) GN=hldE PE=3 SV=1
Length = 490
Score = 39.7 bits (91), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 52 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDIERYEAVR 109
+ +G +D+ H GH + L A+ LIVG+ SDA R KG R V ++ R E +
Sbjct: 358 FTNGCFDILHPGHVKVLTAARGACDR--LIVGLNSDASVKRLKGESRPVQDERARAEVLA 415
Query: 110 HCRYVDEVV---RDAPWE 124
VD VV D P +
Sbjct: 416 ALEAVDLVVIFEEDTPLQ 433
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 265 YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDEKKFRFQN 322
+ +G +D+ H GH + L A+ LIVG+ SDA R KG R V ++ +
Sbjct: 358 FTNGCFDILHPGHVKVLTAARGACDR--LIVGLNSDASVKRLKGESRPVQDERARAEVLA 415
Query: 323 KIE 325
+E
Sbjct: 416 ALE 418
>sp|A8GJU3|HLDE_SERP5 Bifunctional protein HldE OS=Serratia proteamaculans (strain 568)
GN=hldE PE=3 SV=1
Length = 476
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT-VMNDIE-RYEAV 108
V +GI+D+ H GH L A+ + LIV V SDA T R KG T +N +E R +
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGETRPVNALENRMIVL 400
Query: 109 RHCRYVDEVVRDAPWETD 126
VD VV P+E D
Sbjct: 401 GALEAVDWVV---PFEED 415
Score = 37.4 bits (85), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRT 310
V +GI+D+ H GH L A+ + LIV V SDA T R KG T
Sbjct: 343 VMTNGIFDILHAGHVSYLANARKL--GDRLIVAVNSDASTKRLKGET 387
>sp|Q8Q095|RIBL_METMA FAD synthase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM
3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=ribL PE=3
SV=1
Length = 151
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 263 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322
RV A G +D+ H GH L QAK + +++I+ S+ +TH+ K V+ +E++
Sbjct: 15 RVLATGTFDILHPGHVYFLAQAKALGDELFVIIARDSN-VTHKPK--PVIPEEQRL---- 67
Query: 323 KIEEFKDRSKRVMENIGERRVDMIQKWEEKSRDII 357
E D K V + I DM + E DII
Sbjct: 68 ---EMVDALKAVNKAILGSEKDMFEPLREIKPDII 99
Score = 36.6 bits (83), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
Query: 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR 109
RV A G +D+ H GH L QAK + +++I+ S+ +TH+ K V+ + +R E V
Sbjct: 15 RVLATGTFDILHPGHVYFLAQAKALGDELFVIIARDSN-VTHKPK--PVIPEEQRLEMVD 71
Query: 110 HCRYVDEVV 118
+ V++ +
Sbjct: 72 ALKAVNKAI 80
>sp|Q9A2C5|HLDE_CAUCR Bifunctional protein HldE OS=Caulobacter crescentus (strain ATCC
19089 / CB15) GN=hldE PE=3 SV=1
Length = 483
Score = 39.3 bits (90), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 46 SRKVRV-YADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG--RTVMNDI 102
+R ++V + +G +D+ H GH L QAK LIVG+ +DA + KG R V +
Sbjct: 347 ARGLKVGFTNGCFDLLHPGHVSLLSQAKAACDR--LIVGLNTDASVSKLKGPTRPVQKEQ 404
Query: 103 ERYEAVRHCRYVDEVV---RDAPWETDDEF 129
R + VD VV D P E F
Sbjct: 405 GRATVLASLSSVDLVVLFDEDTPLELIKAF 434
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 13/72 (18%)
Query: 239 RNLARGYTAKDLNVSFLNVTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVC 298
+ + G+ A+ L V F N G +D+ H GH L QAK LIVG+
Sbjct: 339 QRIVEGWRARGLKVGFTN-----------GCFDLLHPGHVSLLSQAKAACDR--LIVGLN 385
Query: 299 SDALTHRKKGRT 310
+DA + KG T
Sbjct: 386 TDASVSKLKGPT 397
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,864,594
Number of Sequences: 539616
Number of extensions: 6812864
Number of successful extensions: 18934
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 188
Number of HSP's that attempted gapping in prelim test: 18454
Number of HSP's gapped (non-prelim): 471
length of query: 413
length of database: 191,569,459
effective HSP length: 120
effective length of query: 293
effective length of database: 126,815,539
effective search space: 37156952927
effective search space used: 37156952927
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)