Query psy5600
Match_columns 413
No_of_seqs 322 out of 2517
Neff 5.0
Searched_HMMs 29240
Date Fri Aug 16 21:42:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3elb_A Ethanolamine-phosphate 100.0 5.4E-53 1.8E-57 422.7 22.3 288 45-396 4-328 (341)
2 3hl4_A Choline-phosphate cytid 100.0 7.1E-41 2.4E-45 319.7 14.5 167 42-256 70-236 (236)
3 3elb_A Ethanolamine-phosphate 100.0 2.2E-32 7.5E-37 273.8 13.3 144 43-236 193-341 (341)
4 3hl4_A Choline-phosphate cytid 99.9 1.9E-22 6.7E-27 192.6 7.2 126 258-396 73-203 (236)
5 2b7l_A Glycerol-3-phosphate cy 99.8 3.4E-20 1.2E-24 159.6 9.3 128 48-231 1-128 (132)
6 1coz_A Protein (glycerol-3-pho 99.8 3.7E-20 1.3E-24 158.6 9.5 127 48-230 1-127 (129)
7 3glv_A Lipopolysaccharide core 99.8 2.9E-19 9.8E-24 157.2 10.8 135 47-234 1-140 (143)
8 3nv7_A Phosphopantetheine aden 99.7 2.5E-18 8.6E-23 154.9 7.9 80 48-134 2-82 (157)
9 4f3r_A Phosphopantetheine aden 99.7 1.7E-17 5.8E-22 150.0 9.4 80 48-134 5-84 (162)
10 3k9w_A Phosphopantetheine aden 99.7 1.6E-16 5.6E-21 146.8 10.1 80 48-134 22-102 (187)
11 3nbk_A Phosphopantetheine aden 99.7 3E-16 1E-20 144.2 11.2 82 46-134 19-101 (177)
12 3nd5_A Phosphopantetheine aden 99.6 7E-16 2.4E-20 140.6 9.4 80 48-134 2-83 (171)
13 3f3m_A Phosphopantetheine aden 99.6 2E-15 6.7E-20 137.3 11.3 80 48-134 3-83 (168)
14 2b7l_A Glycerol-3-phosphate cy 99.6 2.2E-15 7.5E-20 129.5 8.5 118 261-396 1-120 (132)
15 1vlh_A Phosphopantetheine aden 99.6 6.4E-15 2.2E-19 133.5 11.6 80 48-134 12-92 (173)
16 1coz_A Protein (glycerol-3-pho 99.6 2.4E-15 8.2E-20 128.5 6.7 116 261-393 1-117 (129)
17 3glv_A Lipopolysaccharide core 99.6 4.6E-15 1.6E-19 130.3 7.6 97 261-371 2-98 (143)
18 1qjc_A Phosphopantetheine aden 99.6 2.6E-14 8.9E-19 125.5 12.2 80 48-134 1-81 (158)
19 1o6b_A Phosphopantetheine aden 99.5 2.3E-13 7.8E-18 121.5 12.1 80 48-134 2-82 (169)
20 3nv7_A Phosphopantetheine aden 99.5 2.7E-14 9.2E-19 128.5 5.3 113 261-391 2-122 (157)
21 1od6_A PPAT, phosphopantethein 99.4 6.5E-13 2.2E-17 117.0 11.1 80 48-134 1-82 (160)
22 2qtr_A Nicotinate (nicotinamid 99.4 5.3E-13 1.8E-17 120.6 10.2 83 48-134 2-93 (189)
23 1kam_A Deamido-NAD(+), nicotin 99.4 2.8E-12 9.7E-17 117.1 13.4 82 49-134 8-98 (194)
24 4f3r_A Phosphopantetheine aden 99.4 1.6E-13 5.3E-18 124.0 3.2 113 260-391 4-124 (162)
25 3do8_A Phosphopantetheine aden 99.4 1.1E-13 3.9E-18 123.1 1.9 63 50-114 2-66 (148)
26 3k9w_A Phosphopantetheine aden 99.3 1.7E-12 5.8E-17 119.9 4.9 94 260-371 21-119 (187)
27 1yum_A 'probable nicotinate-nu 99.3 1.1E-11 3.9E-16 118.0 10.3 85 47-134 22-113 (242)
28 3h05_A Uncharacterized protein 99.3 1.4E-11 4.7E-16 112.5 9.6 134 48-232 2-149 (177)
29 1k4m_A NAMN adenylyltransferas 99.3 1.3E-11 4.3E-16 114.5 9.2 82 50-134 4-93 (213)
30 1mrz_A Riboflavin kinase/FMN a 99.3 1E-11 3.5E-16 122.0 8.9 128 51-232 2-147 (293)
31 3f3m_A Phosphopantetheine aden 99.2 9.3E-12 3.2E-16 113.0 4.8 89 261-367 3-92 (168)
32 1lw7_A Transcriptional regulat 99.2 4.7E-11 1.6E-15 118.3 10.2 71 47-119 1-78 (365)
33 3nd5_A Phosphopantetheine aden 99.2 7E-12 2.4E-16 114.2 3.4 89 261-367 2-92 (171)
34 1f9a_A Hypothetical protein MJ 99.2 2.1E-10 7.3E-15 102.6 12.8 64 50-118 2-68 (168)
35 2h29_A Probable nicotinate-nuc 99.2 6.9E-11 2.4E-15 107.4 9.5 84 48-134 2-93 (189)
36 1ej2_A Nicotinamide mononucleo 99.2 2.1E-10 7.3E-15 103.8 11.8 62 49-114 4-66 (181)
37 1qjc_A Phosphopantetheine aden 99.1 2.3E-10 7.8E-15 100.3 7.6 93 261-371 1-94 (158)
38 3nbk_A Phosphopantetheine aden 99.1 7.6E-11 2.6E-15 108.3 4.5 92 258-367 18-110 (177)
39 1vlh_A Phosphopantetheine aden 99.1 1.8E-10 6.2E-15 104.2 7.0 83 261-356 12-95 (173)
40 2x0k_A Riboflavin biosynthesis 99.0 2E-09 7E-14 107.5 11.3 138 49-231 16-173 (338)
41 3do8_A Phosphopantetheine aden 98.9 6.2E-10 2.1E-14 98.9 5.9 58 263-322 2-59 (148)
42 2qjo_A Bifunctional NMN adenyl 98.9 2E-09 6.9E-14 104.3 9.2 64 47-114 6-70 (341)
43 1kam_A Deamido-NAD(+), nicotin 98.9 4.4E-09 1.5E-13 95.9 9.4 110 261-381 7-128 (194)
44 1o6b_A Phosphopantetheine aden 98.9 1.9E-09 6.6E-14 95.9 6.8 93 261-371 2-95 (169)
45 2qjt_B Nicotinamide-nucleotide 98.9 1.6E-09 5.6E-14 105.7 6.3 61 48-112 7-68 (352)
46 1od6_A PPAT, phosphopantethein 98.8 6.3E-09 2.2E-13 91.4 7.0 91 264-371 3-95 (160)
47 1mrz_A Riboflavin kinase/FMN a 98.8 2.4E-09 8.3E-14 105.1 3.9 92 264-371 2-105 (293)
48 2qtr_A Nicotinate (nicotinamid 98.8 5.3E-09 1.8E-13 94.3 5.7 107 261-378 2-120 (189)
49 3op1_A Macrolide-efflux protei 98.8 1.5E-08 5E-13 100.3 9.2 136 49-231 21-176 (308)
50 2h29_A Probable nicotinate-nuc 98.7 1.6E-08 5.4E-13 91.8 7.1 110 261-381 2-123 (189)
51 1nup_A FKSG76; NAD biosynthesi 98.7 1.8E-08 6.3E-13 96.1 7.8 88 47-134 5-101 (252)
52 3h05_A Uncharacterized protein 98.7 2.6E-08 9E-13 90.8 8.2 112 261-382 2-124 (177)
53 1k4m_A NAMN adenylyltransferas 98.7 1.4E-08 4.6E-13 94.0 6.0 106 262-378 3-121 (213)
54 1yum_A 'probable nicotinate-nu 98.7 3.4E-08 1.2E-12 93.9 7.6 60 260-322 22-81 (242)
55 1kqn_A Nmnat, nicotinamide mon 98.6 4.2E-08 1.4E-12 95.4 7.8 88 46-134 6-103 (279)
56 1lw7_A Transcriptional regulat 98.6 8.8E-08 3E-12 94.8 7.5 60 261-322 2-66 (365)
57 1ej2_A Nicotinamide mononucleo 98.4 2.3E-07 7.8E-12 83.8 6.7 57 262-322 4-60 (181)
58 2ejc_A Pantoate--beta-alanine 98.4 2.5E-07 8.5E-12 90.5 6.7 70 46-119 20-92 (280)
59 1f9a_A Hypothetical protein MJ 98.4 3.1E-07 1.1E-11 82.0 6.8 56 263-322 2-57 (168)
60 2qjo_A Bifunctional NMN adenyl 98.4 1.6E-07 5.3E-12 91.0 4.9 59 260-322 6-64 (341)
61 2qjt_B Nicotinamide-nucleotide 98.4 2.6E-07 8.7E-12 90.2 6.0 58 261-322 7-64 (352)
62 2x0k_A Riboflavin biosynthesis 98.4 2E-07 6.7E-12 93.2 4.5 98 261-371 15-129 (338)
63 3op1_A Macrolide-efflux protei 98.3 4.5E-07 1.5E-11 89.7 5.8 99 261-372 20-136 (308)
64 2ejc_A Pantoate--beta-alanine 98.3 5.2E-07 1.8E-11 88.2 5.0 70 260-341 21-94 (280)
65 3gmi_A UPF0348 protein MJ0951; 98.2 1E-05 3.6E-10 81.4 13.2 80 46-132 50-134 (357)
66 1nup_A FKSG76; NAD biosynthesi 98.0 3.2E-06 1.1E-10 80.6 3.7 63 260-322 5-69 (252)
67 1kqn_A Nmnat, nicotinamide mon 97.8 1E-05 3.6E-10 78.5 4.3 64 258-322 5-71 (279)
68 3gmi_A UPF0348 protein MJ0951; 97.1 0.00094 3.2E-08 67.2 8.1 105 259-384 50-167 (357)
69 1v8f_A Pantoate-beta-alanine l 96.7 0.0045 1.5E-07 60.3 8.5 64 50-119 21-87 (276)
70 3ag6_A Pantothenate synthetase 96.0 0.021 7.2E-07 55.8 9.1 68 46-119 21-93 (283)
71 3q12_A Pantoate--beta-alanine 96.0 0.0058 2E-07 59.9 4.8 37 259-300 23-61 (287)
72 1v8f_A Pantoate-beta-alanine l 95.7 0.011 3.9E-07 57.5 5.7 55 263-322 21-78 (276)
73 3cov_A Pantothenate synthetase 95.5 0.026 8.9E-07 55.6 7.4 63 54-119 38-104 (301)
74 1jhd_A Sulfate adenylyltransfe 95.4 0.019 6.5E-07 58.5 6.2 58 49-111 193-250 (396)
75 3q12_A Pantoate--beta-alanine 95.2 0.016 5.5E-07 56.8 4.8 64 45-118 22-94 (287)
76 1v47_A ATP sulfurylase; produc 95.0 0.036 1.2E-06 55.5 6.7 58 49-113 156-214 (349)
77 3ag6_A Pantothenate synthetase 94.3 0.084 2.9E-06 51.6 7.3 58 260-322 22-84 (283)
78 3inn_A Pantothenate synthetase 94.3 0.11 3.8E-06 51.5 8.1 69 44-118 39-112 (314)
79 3inn_A Pantothenate synthetase 93.3 0.072 2.4E-06 52.8 4.8 58 260-322 42-104 (314)
80 3mxt_A Pantothenate synthetase 92.1 0.12 4.2E-06 50.5 4.6 36 260-301 24-61 (285)
81 3uk2_A Pantothenate synthetase 92.0 0.21 7.3E-06 48.8 6.1 68 47-118 21-91 (283)
82 3cov_A Pantothenate synthetase 91.8 0.24 8.2E-06 48.8 6.3 53 268-322 39-95 (301)
83 1jhd_A Sulfate adenylyltransfe 89.4 0.41 1.4E-05 48.7 5.7 56 262-322 193-248 (396)
84 3uk2_A Pantothenate synthetase 89.3 0.56 1.9E-05 45.8 6.3 60 260-322 21-83 (283)
85 3n8h_A Pantothenate synthetase 89.1 0.23 8E-06 48.0 3.4 38 260-300 23-60 (264)
86 1v47_A ATP sulfurylase; produc 88.2 0.69 2.4E-05 46.2 6.4 54 262-322 156-209 (349)
87 3mxt_A Pantothenate synthetase 88.0 0.36 1.2E-05 47.2 4.0 67 45-118 22-93 (285)
88 3n8h_A Pantothenate synthetase 87.8 0.39 1.3E-05 46.5 4.1 41 45-88 21-61 (264)
89 1pei_A PEPC22; transferase, nu 85.5 0.22 7.7E-06 31.9 0.7 24 338-361 2-25 (26)
90 2gks_A Bifunctional SAT/APS ki 48.2 25 0.00087 36.6 6.3 56 49-111 164-220 (546)
91 1r6x_A ATP:sulfate adenylyltra 45.5 26 0.0009 35.5 5.7 56 49-111 188-244 (395)
92 1m8p_A Sulfate adenylyltransfe 42.5 29 0.001 36.4 5.7 56 50-111 192-247 (573)
93 1g8f_A Sulfate adenylyltransfe 40.9 30 0.001 36.0 5.5 55 50-111 190-245 (511)
94 3nkl_A UDP-D-quinovosamine 4-d 25.6 1.9E+02 0.0065 23.2 7.0 71 47-124 3-76 (141)
95 1li5_A Cysrs, cysteinyl-tRNA s 25.1 35 0.0012 34.8 2.7 22 45-66 19-42 (461)
96 3kfl_A Methionyl-tRNA syntheta 23.6 25 0.00086 36.6 1.3 33 33-66 11-47 (564)
97 3c8z_A Cysteinyl-tRNA syntheta 21.6 44 0.0015 33.4 2.6 41 46-87 37-85 (414)
98 3tqo_A Cysteinyl-tRNA syntheta 21.0 47 0.0016 34.2 2.7 28 261-288 222-249 (462)
No 1
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.4e-53 Score=422.74 Aligned_cols=288 Identities=28% Similarity=0.377 Sum_probs=234.4
Q ss_pred CCCCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhccccCceeecCCCC
Q psy5600 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPWE 124 (413)
Q Consensus 45 ~~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~~ 124 (413)
.++|++||++||||+||.||+++|+||+++| |+|+|||++|+.+.++|++|+++++||+++|++|+|||+|++.+||.
T Consensus 4 ~~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~--d~LiVgV~~d~~v~~~K~~pi~s~eER~~~l~~l~~VD~Vv~f~~~~ 81 (341)
T 3elb_A 4 GRRAVRVWCDGCYDMVHYGHSNQLRQARAMG--DYLIVGVHTDEEIAKHKGPPVFTQEERYKMVQAIKWVDEVVPAAPYV 81 (341)
T ss_dssp CCCCCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEECCHHHHHHHSSCCSSCHHHHHHHHHHBTTCCEEEETCCSS
T ss_pred CCCceEEEEEeeCCCCCHHHHHHHHHHHHhC--CcCEEEeecCHHHhccCCCCCCCHHHHHHHHHHcCCCCEEEecCCCC
Confidence 4678999999999999999999999999996 79999999999888778889999999999999999999999999998
Q ss_pred ChHHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCccccchHHH
Q psy5600 125 TDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAH 204 (413)
Q Consensus 125 l~~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~~~~d~y~~ 204 (413)
++.+|+++++ +|++++|+||....++.+.|+.
T Consensus 82 ~~~efi~~~~------------------------------------------------~d~vV~G~D~~~g~~~~~~~~~ 113 (341)
T 3elb_A 82 TTLETLDKYN------------------------------------------------CDFCVHGNDITLTVDGRDTYEE 113 (341)
T ss_dssp CCHHHHHHTT------------------------------------------------CSEEEECSCCCBCTTSCBTTHH
T ss_pred CHHHHHHHhC------------------------------------------------CCEEEECCCCCCCCCCcchHHH
Confidence 8999999999 8899999999887788899999
Q ss_pred HHhCCeEEEcCCCCCCCHHHHHHHHHhchhhh-h---------hh--hccc---CCCccccc---------chhee----
Q psy5600 205 LKARGMFVATQRTEGVSTSDIVARIVRDYDIY-V---------RR--NLAR---GYTAKDLN---------VSFLN---- 256 (413)
Q Consensus 205 ~ke~Gi~v~i~RT~gVSTSdII~RI~~~~~~~-~---------~R--n~~r---g~s~k~l~---------v~~~~---- 256 (413)
+|+.|.++.++||+|+|||+|++||+...... . ++ +... +.++..-. +.++.
T Consensus 114 ~k~~G~~~~~~~t~g~STT~ii~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~g~~ 193 (341)
T 3elb_A 114 VKQAGRYRECKRTQGVSTTDLVGRMLLVTKAHHSSQEMSSEYREYADSFGKCPGGRNPWTGVSQFLQTSQKIIQFASGKE 193 (341)
T ss_dssp HHHTTCEEECCCCTTCCHHHHHHHHHC-------------------------------CCCCCCCCCCHHHHHHHCCCCC
T ss_pred HHhCCEEEEeCCCCCCCHHHHHHHHHHhccccccccccchhhHHHHHhhccCccccCCCcceecccCCcceeeeeccCCC
Confidence 99999999999999999999999999754321 1 00 0111 11111000 01111
Q ss_pred eeccceEEEEccccccCChhHHHHHHHHHhcCCCc--EEEEEEcchhhhhhcCC--CCCCCHHHHHHHHhhHHHHHhhhh
Q psy5600 257 VTSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNV--YLIVGVCSDALTHRKKG--RTVMNDEKKFRFQNKIEEFKDRSK 332 (413)
Q Consensus 257 ~~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd--~LIVGV~sD~~v~~~Kg--~Pi~~~~eR~~~v~~i~~v~e~~k 332 (413)
+.+++++||++||||+||.||+++|++|+++ +| +|||||++|++++++|| +|+++++||+++++ +++
T Consensus 194 ~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l--~D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~-------~~~ 264 (341)
T 3elb_A 194 PQPGETVIYVAGAFDLFHIGHVDFLEKVHRL--AERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVL-------ACR 264 (341)
T ss_dssp CCTTCEEEEEEECCTTCCHHHHHHHHHHHTT--SSSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHH-------TBT
T ss_pred CCCCCEEEEEecccCCCCHHHHHHHHHHHHh--CCCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHH-------HcC
Confidence 2346789999999999999999999999999 68 99999999999999888 59999999999998 899
Q ss_pred hHHHHhccchhhh-hHhHHhhchhhhccceeeeecCCCccchh--h--hhHHHhhhhcCCCCCCCCCCC
Q psy5600 333 RVMENIGERRVDM-IQKWEEKSRDIIDTFLLLFGREGRLKHMW--N--EGKGKFLQAFSPPASPTRSRG 396 (413)
Q Consensus 333 ~Vd~vv~~~~~d~-~~~~e~~~~Dii~~f~~~~G~Dw~~~~~~--~--~~k~~~~~~~~~~~~~~~~~~ 396 (413)
+||+|+.....+. .+-++++++|+ ++.|+||...... + +...+.-.+...|.++..||+
T Consensus 265 ~vd~V~v~~~~~l~~~~~~~~~~~~-----iv~G~d~~~~~~~g~d~y~~~k~~G~~~~i~~~~~~STt 328 (341)
T 3elb_A 265 YVSEVVIGAPYAVTAELLSHFKVDL-----VCHGKTEIIPDRDGSDPYQEPKRRGIFRQIDSGSNLTTD 328 (341)
T ss_dssp TCCEEEEEECSSCCHHHHHHTTCSE-----EEECSSCCCCCTTSCCTTHHHHHHTCEEECCCSCCCCHH
T ss_pred CCCCEEECCCCcchHHHHHhcCCcE-----EEECCCCccccCCccchHHHHHhCCEEEEcCCCCCCCHH
Confidence 9999998665443 46678889999 9999999865322 1 234455666777777777765
No 2
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=100.00 E-value=7.1e-41 Score=319.66 Aligned_cols=167 Identities=71% Similarity=1.187 Sum_probs=138.8
Q ss_pred CCCCCCCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhccccCceeecC
Q psy5600 42 NNNASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDA 121 (413)
Q Consensus 42 ~~~~~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~a 121 (413)
+...++|++||++|+||+||.||+++|+||+++|+||+|||||++|+.+.++|++|+|+++||+++|++|+|||+|++++
T Consensus 70 ~~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~~~k~VD~Vvv~~ 149 (236)
T 3hl4_A 70 GTPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNA 149 (236)
T ss_dssp CCCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHHTBTTCSEEESSC
T ss_pred CCCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHHHhCCCCeEEECC
Confidence 34457899999999999999999999999999998899999999999998888899999999999999999999999999
Q ss_pred CCCChHHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCccccch
Q psy5600 122 PWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDV 201 (413)
Q Consensus 122 p~~l~~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~~~~d~ 201 (413)
||.++.+|+++++ +|+|+|||+++....++|+
T Consensus 150 p~~l~~d~i~~~~------------------------------------------------~d~Vv~GDd~~~~~~~~d~ 181 (236)
T 3hl4_A 150 PWTLTPEFLAEHR------------------------------------------------IDFVAHDDIPYSSAGSDDV 181 (236)
T ss_dssp CSSCCHHHHHHTT------------------------------------------------CCEEEEESSCCCCSSCSCT
T ss_pred cCcCcHHHHHHcC------------------------------------------------CCEEEECCccccCCCchhH
Confidence 9999999999999 8999999999887778899
Q ss_pred HHHHHhCCeEEEcCCCCCCCHHHHHHHHHhchhhhhhhhcccCCCcccccchhee
Q psy5600 202 YAHLKARGMFVATQRTEGVSTSDIVARIVRDYDIYVRRNLARGYTAKDLNVSFLN 256 (413)
Q Consensus 202 y~~~ke~Gi~v~i~RT~gVSTSdII~RI~~~~~~~~~Rn~~rg~s~k~l~v~~~~ 256 (413)
|+.+|++|+++.++||+++|||+|++||+++|..|++||++||+++++||++|++
T Consensus 182 y~~lk~~G~~~~v~rt~giSTT~Ii~RI~~~~~~y~~R~l~rg~~~~~~~~~~~~ 236 (236)
T 3hl4_A 182 YKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFIN 236 (236)
T ss_dssp THHHHHTTCEEEECCCTTCCHHHHHHHHHHHHHC---------------------
T ss_pred HHHHHhCCeEEEeccCCCCCHHHHHHHHHHhHHHHHHHHhcCCCCHHHhCCcccC
Confidence 9999999999999999999999999999999999999999999999999998864
No 3
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=99.97 E-value=2.2e-32 Score=273.76 Aligned_cols=144 Identities=32% Similarity=0.532 Sum_probs=129.3
Q ss_pred CCCCCCeEEEEcCccCCCChHHHHHHHHHhhcCCCC--EEEEEEecCcccccCCC--CCCCCHHHHHHHHHhccccCcee
Q psy5600 43 NNASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNV--YLIVGVCSDALTHRKKG--RTVMNDIERYEAVRHCRYVDEVV 118 (413)
Q Consensus 43 ~~~~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd--~LIVGV~sDe~v~~~Kg--~Pv~~~eER~~~V~a~r~VDeVv 118 (413)
.+.++.++||++|||||||.||+++|+||+++| | +|||||++|++++++|| +|+|+++||+++|++|+|||+|+
T Consensus 193 ~~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~--D~~~LiVgV~~d~~v~~~Kg~~~pi~~~~ER~~~v~~~~~vd~V~ 270 (341)
T 3elb_A 193 EPQPGETVIYVAGAFDLFHIGHVDFLEKVHRLA--ERPYIIAGLHFDQEVNHYKGKNYPIMNLHERTLSVLACRYVSEVV 270 (341)
T ss_dssp CCCTTCEEEEEEECCTTCCHHHHHHHHHHHTTS--SSEEEEEEEECHHHHHHHHCTTCCSSCHHHHHHHHHTBTTCCEEE
T ss_pred CCCCCCEEEEEecccCCCCHHHHHHHHHHHHhC--CCCEEEEEEccCHhhHhhcCCCCCCCCHHHHHHHHHHcCCCCCEE
Confidence 445678999999999999999999999999997 7 99999999999988887 59999999999999999999999
Q ss_pred ecCCCCChHHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccC-cc
Q psy5600 119 RDAPWETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMS-EF 197 (413)
Q Consensus 119 i~ap~~l~~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~-~~ 197 (413)
+++||.++.+|+++++ +|++++|+++... ..
T Consensus 271 v~~~~~l~~~~~~~~~------------------------------------------------~~~iv~G~d~~~~~~~ 302 (341)
T 3elb_A 271 IGAPYAVTAELLSHFK------------------------------------------------VDLVCHGKTEIIPDRD 302 (341)
T ss_dssp EEECSSCCHHHHHHTT------------------------------------------------CSEEEECSSCCCCCTT
T ss_pred ECCCCcchHHHHHhcC------------------------------------------------CcEEEECCCCccccCC
Confidence 9999999999999999 7899999887653 45
Q ss_pred ccchHHHHHhCCeEEEcCCCCCCCHHHHHHHHHhchhhh
Q psy5600 198 GTDVYAHLKARGMFVATQRTEGVSTSDIVARIVRDYDIY 236 (413)
Q Consensus 198 ~~d~y~~~ke~Gi~v~i~RT~gVSTSdII~RI~~~~~~~ 236 (413)
+.|+|+.+|+.|++..+++++++|||+||+||++++..|
T Consensus 303 g~d~y~~~k~~G~~~~i~~~~~~STt~ii~RI~~nr~~~ 341 (341)
T 3elb_A 303 GSDPYQEPKRRGIFRQIDSGSNLTTDLIVQRIITNRLEY 341 (341)
T ss_dssp SCCTTHHHHHHTCEEECCCSCCCCHHHHHHHHHC-----
T ss_pred ccchHHHHHhCCEEEEcCCCCCCCHHHHHHHHHHHHhcC
Confidence 789999999999999999999999999999999998754
No 4
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.86 E-value=1.9e-22 Score=192.58 Aligned_cols=126 Identities=38% Similarity=0.544 Sum_probs=106.8
Q ss_pred eccceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHH
Q psy5600 258 TSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMEN 337 (413)
Q Consensus 258 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~v 337 (413)
..++++||+.|+||+||.||+++|++|+++++||+|||||++|+.+.++||+|+++++||+++|+ ++++||+|
T Consensus 73 ~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIVgV~~D~~v~~~Kg~pi~s~eER~e~v~-------~~k~VD~V 145 (236)
T 3hl4_A 73 CERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQ-------HCRYVDEV 145 (236)
T ss_dssp TTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEEEECCHHHHHHHTCCCSSCHHHHHHHHH-------TBTTCSEE
T ss_pred CCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEEEEcccHHHhhcCCCCCCCHHHHHHHHH-------HhCCCCeE
Confidence 35678999999999999999999999999987899999999999999999999999999999998 89999999
Q ss_pred hccchhhh-hHhHHhhchhhhccceeeeecCCCccc----hhhhhHHHhhhhcCCCCCCCCCCC
Q psy5600 338 IGERRVDM-IQKWEEKSRDIIDTFLLLFGREGRLKH----MWNEGKGKFLQAFSPPASPTRSRG 396 (413)
Q Consensus 338 v~~~~~d~-~~~~e~~~~Dii~~f~~~~G~Dw~~~~----~~~~~k~~~~~~~~~~~~~~~~~~ 396 (413)
+.+...+. .+.++++++|+ +++|+||.... .+..+|+. -..+..|++|..||+
T Consensus 146 vv~~p~~l~~d~i~~~~~d~-----Vv~GDd~~~~~~~~d~y~~lk~~-G~~~~v~rt~giSTT 203 (236)
T 3hl4_A 146 VRNAPWTLTPEFLAEHRIDF-----VAHDDIPYSSAGSDDVYKHIKEA-GMFAPTQRTEGISTS 203 (236)
T ss_dssp ESSCCSSCCHHHHHHTTCCE-----EEEESSCCCCSSCSCTTHHHHHT-TCEEEECCCTTCCHH
T ss_pred EECCcCcCcHHHHHHcCCCE-----EEECCccccCCCchhHHHHHHhC-CeEEEeccCCCCCHH
Confidence 98766553 46788999999 88999986542 33445443 455889999988775
No 5
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.81 E-value=3.4e-20 Score=159.59 Aligned_cols=128 Identities=27% Similarity=0.402 Sum_probs=91.2
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhccccCceeecCCCCChH
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPWETDD 127 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~~l~~ 127 (413)
|+++++.|+||++|.||..++++|++++ ++++|+|+.|......++.|+++.+||++|+++|+++|.|++..+|..+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALSTDEFNQIKHKKSYYDYEQRKMMLESIRYVDLVIPEKGWGQKE 78 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEEECHHHHHHTTCCCSSCHHHHHHHHHTBTTCCEEEEECCGGGHH
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhC--CcEEEEEECCHHHhccCCCCCCCHHHHHHHHHhcCCCCEEEECCChHHHH
Confidence 5789999999999999999999999996 68999999997442222368999999999999999999999876666555
Q ss_pred HHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCccccchHHHHHh
Q psy5600 128 EFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKA 207 (413)
Q Consensus 128 dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~~~~d~y~~~ke 207 (413)
+++++++ +++++.|.|... .++.|++
T Consensus 79 ~~~~~~~------------------------------------------------~~~iv~G~D~~~------~~~~L~~ 104 (132)
T 2b7l_A 79 DDVEKFD------------------------------------------------VDVFVMGHDWEG------EFDFLKD 104 (132)
T ss_dssp HHHHHTT------------------------------------------------CCEEEECGGGTT------TTGGGTT
T ss_pred HHHHHcC------------------------------------------------CCEEEECCCCcC------cHHHHHh
Confidence 5566665 456666766522 1235777
Q ss_pred CCeEEEcCCCCCCCHHHHHHHHHh
Q psy5600 208 RGMFVATQRTEGVSTSDIVARIVR 231 (413)
Q Consensus 208 ~Gi~v~i~RT~gVSTSdII~RI~~ 231 (413)
.|.++.+++...+|||.|+++|..
T Consensus 105 ~~~v~~i~~~~~iSST~IR~~i~~ 128 (132)
T 2b7l_A 105 KCEVIYLKRTEGISTTKIKQELYG 128 (132)
T ss_dssp TSEEEECSSCC-------------
T ss_pred CCEEEEECCCCCcCHHHHHHHHHh
Confidence 888889999999999999998854
No 6
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.81 E-value=3.7e-20 Score=158.56 Aligned_cols=127 Identities=30% Similarity=0.436 Sum_probs=101.9
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhccccCceeecCCCCChH
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPWETDD 127 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~~l~~ 127 (413)
|+++++.|+||++|.||+.++++|++++ |+++|+++.|......+++|+++.+||++|+++|+++|.|+...+|..+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~~d~v~~~~~~~~~~ 78 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAISTDEFNLQKQKKAYHSYEHRKLILETIRYVDEVIPEKNWEQKK 78 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEECHHHHHHHTCCCSSCHHHHHHHHTTBTTCCEEEEECCSTTHH
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHhcCCCCCCCCHHHHHHHHHhcCCCCEEEeCCCHHHHH
Confidence 5789999999999999999999999996 78999999987321122368999999999999999999999877777666
Q ss_pred HHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCccccchHHHHHh
Q psy5600 128 EFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLKA 207 (413)
Q Consensus 128 dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~~~~d~y~~~ke 207 (413)
+++++++ +++++.|.|+.. -++.|++
T Consensus 79 ~~l~~~~------------------------------------------------~~~iv~G~D~~~------~~~~L~~ 104 (129)
T 1coz_A 79 QDIIDHN------------------------------------------------IDVFVMGDDWEG------KFDFLKD 104 (129)
T ss_dssp HHHHHTT------------------------------------------------CSEEEEEGGGTT------TTGGGTT
T ss_pred HHHHHhC------------------------------------------------CcEEEECCCCCC------cHHHHHh
Confidence 6666666 456666766521 1235777
Q ss_pred CCeEEEcCCCCCCCHHHHHHHHH
Q psy5600 208 RGMFVATQRTEGVSTSDIVARIV 230 (413)
Q Consensus 208 ~Gi~v~i~RT~gVSTSdII~RI~ 230 (413)
.|.++.+++...+|||.|+++|.
T Consensus 105 ~~~v~~~~~~~~iSST~IR~~i~ 127 (129)
T 1coz_A 105 QCEVVYLPRTEGISTTKIKEEIA 127 (129)
T ss_dssp TSEEEEECCCTTCCHHHHHHTC-
T ss_pred CCeEEEcCCCCCcCHHHHHHHHH
Confidence 78888999999999999988764
No 7
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.79 E-value=2.9e-19 Score=157.15 Aligned_cols=135 Identities=19% Similarity=0.240 Sum_probs=93.0
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhccccCceeecCCCCCh
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPWETD 126 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~~l~ 126 (413)
+|++|++.|+||++|.||..+|++|++++ +.++|+|+.|....+++.+|+++.+||++++++|++||.|++..|.+ .
T Consensus 1 ~m~~v~~~G~FD~vH~GH~~li~~a~~~~--~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~~~~~vd~v~~~~~~~-f 77 (143)
T 3glv_A 1 GMIRVMATGVFDILHLGHIHYLKESKKLG--DELVVVVARDSTARNNGKIPIFDENSRLALISELKVVDRAILGHEGD-M 77 (143)
T ss_dssp CCCEEEEEECCSSCCHHHHHHHHHHHTTS--SEEEEEECCHHHHHHTTCCCSSCHHHHHHHHTTBTTCSEEEECCTTC-H
T ss_pred CceEEEEEeecCCCCHHHHHHHHHHHHhC--CCcEEEEECCcchhhcCCCCCCCHHHHHHHHHhcCCCCEEEEcCchh-H
Confidence 47899999999999999999999999996 68999999998766433469999999999999999999999987776 3
Q ss_pred HHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCccccchHHHHH
Q psy5600 127 DEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEFGTDVYAHLK 206 (413)
Q Consensus 127 ~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~~~~d~y~~~k 206 (413)
.+++++++ +++++.|.+... +.++..+..+
T Consensus 78 ~~~~~~l~------------------------------------------------~~~iv~G~d~~f--~~~~l~~~~~ 107 (143)
T 3glv_A 78 MKTVIEVK------------------------------------------------PDIITLGYDQKF--DEAELQSKIN 107 (143)
T ss_dssp HHHHHHHC------------------------------------------------CSEEEECTTCHH--HHHHHHHHHH
T ss_pred HHHHHhcC------------------------------------------------CCEEEECCCCCC--CHHHHHHHHH
Confidence 45788887 678888888643 2235556666
Q ss_pred hCCeE---EEcCC--CCCCCHHHHHHHHHhchh
Q psy5600 207 ARGMF---VATQR--TEGVSTSDIVARIVRDYD 234 (413)
Q Consensus 207 e~Gi~---v~i~R--T~gVSTSdII~RI~~~~~ 234 (413)
+.|.. +.... ...+|||.|++.|.+.+.
T Consensus 108 ~~g~~v~vv~~~~~~~~~iSST~IR~~i~~~~~ 140 (143)
T 3glv_A 108 KLGITVKIVRISKYDGQLNSSSSVRKKIMELIG 140 (143)
T ss_dssp HHTCCCEEEECCCCC------------------
T ss_pred HcCCeEEEEEeeccCCCcCCHHHHHHHHHHHhc
Confidence 67752 33333 357999999999987663
No 8
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.74 E-value=2.5e-18 Score=154.85 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=71.5
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-ccccCceeecCCCCCh
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRYVDEVVRDAPWETD 126 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~VDeVvi~ap~~l~ 126 (413)
|++++++|||||+|.||++++++|+++| |+|+|||++|. .| +|+++.+||++|++. ++.+|.|.+....+++
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~--D~viv~v~~~~----~K-~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~l~ 74 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF--EKLIVAVAHSS----AK-NPMFSLDERLKMIQLATKSFKNVECVAFEGLL 74 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEECCG----GG-CCSSCHHHHHHHHHHHHTTSTTEEEEEECSCH
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC--CceEEEEccCC----CC-CCCCCHHHHHHHHHHHhcCCCcEEEEecCchH
Confidence 5789999999999999999999999997 79999999985 34 699999999999996 7999998876555689
Q ss_pred HHHHHHhc
Q psy5600 127 DEFLAKHK 134 (413)
Q Consensus 127 ~dfi~~~~ 134 (413)
.+++++++
T Consensus 75 ~~~~~~~~ 82 (157)
T 3nv7_A 75 AYLAKEYH 82 (157)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 99999999
No 9
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.71 E-value=1.7e-17 Score=149.95 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=66.6
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhccccCceeecCCCCChH
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPWETDD 127 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~~l~~ 127 (413)
|++++++|+|||+|.||++++++|+++| |+|+|||+.|. .| +|+++.+||++|++.+...|+|.+....+++.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~--d~viv~v~~~~----~K-~~~~~~~~R~~m~~~~~~~~~v~V~~~~~l~~ 77 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLF--NKIIVACAPTS----RK-DPHLKLEERVNLIADVLTDERVEVLPLTGLLV 77 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGC--SEEEEEECCC-----------CCHHHHHHHHHHHCCCTTEEEEECCSCHH
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHC--CcEEEEEecCC----cc-CCCCCHHHHHHHHHHhhCCCCEEEEeccchHH
Confidence 6899999999999999999999999997 79999999885 33 69999999999999754449887766666899
Q ss_pred HHHHHhc
Q psy5600 128 EFLAKHK 134 (413)
Q Consensus 128 dfi~~~~ 134 (413)
+++++++
T Consensus 78 ~~~~~~~ 84 (162)
T 4f3r_A 78 DFAKTHQ 84 (162)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9999998
No 10
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.66 E-value=1.6e-16 Score=146.83 Aligned_cols=80 Identities=19% Similarity=0.222 Sum_probs=71.5
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-ccccCceeecCCCCCh
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRYVDEVVRDAPWETD 126 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~VDeVvi~ap~~l~ 126 (413)
|+++++.|+|||+|.||+.++++|+++| |+|+|+|.+|. . ++|+++.+||++|++. ++.+|.|.+....+++
T Consensus 22 mki~v~~GsFDpiH~GHl~li~~A~~~~--d~viv~v~~~p----~-K~~l~s~eeR~~ml~~~~~~v~~v~v~~f~~~~ 94 (187)
T 3k9w_A 22 MVVAVYPGTFDPLTRGHEDLVRRASSIF--DTLVVGVADSR----A-KKPFFSLEERLKIANEVLGHYPNVKVMGFTGLL 94 (187)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECCG----G-GCCSSCHHHHHHHHHHHHTTCTTEEEEEESSCH
T ss_pred cEEEEEEEeCCcCcHHHHHHHHHHHHHC--CcEEEEEecCC----c-cCCCCCHHHHHHHHHHHhccCCcEEEEechhhH
Confidence 7899999999999999999999999997 79999999874 2 3689999999999997 7999999886555688
Q ss_pred HHHHHHhc
Q psy5600 127 DEFLAKHK 134 (413)
Q Consensus 127 ~dfi~~~~ 134 (413)
.+++++++
T Consensus 95 ~d~l~~l~ 102 (187)
T 3k9w_A 95 KDFVRAND 102 (187)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 89999998
No 11
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.66 E-value=3e-16 Score=144.22 Aligned_cols=82 Identities=16% Similarity=0.173 Sum_probs=73.2
Q ss_pred CCCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecCCCC
Q psy5600 46 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDAPWE 124 (413)
Q Consensus 46 ~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~ap~~ 124 (413)
.+|++++++|+|||+|.||++++++|+++| |+|+|+|+.|. .| +|+++.+||++|++ +++..+.|.+....+
T Consensus 19 ~~mki~i~~GsFDPiH~GHl~ii~~A~~~~--D~Viv~v~~np----~K-~~~~s~eeR~~mv~~a~~~~~~v~V~~~e~ 91 (177)
T 3nbk_A 19 SHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVAILVNP----AK-TGMFDLDERIAMVKESTTHLPNLRVQVGHG 91 (177)
T ss_dssp -CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCT----TS-CCSSCHHHHHHHHHHHCTTCTTEEEEECCS
T ss_pred CCCEEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCC----CC-CCCCCHHHHHHHHHHHhCCCCCEEEEecCc
Confidence 468899999999999999999999999998 79999999874 33 58999999999999 589999998876666
Q ss_pred ChHHHHHHhc
Q psy5600 125 TDDEFLAKHK 134 (413)
Q Consensus 125 l~~dfi~~~~ 134 (413)
++.+++++++
T Consensus 92 l~vd~~~~~~ 101 (177)
T 3nbk_A 92 LVVDFVRSCG 101 (177)
T ss_dssp CHHHHHHHTT
T ss_pred hHHHHHHHcC
Confidence 8999999999
No 12
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.62 E-value=7e-16 Score=140.58 Aligned_cols=80 Identities=16% Similarity=0.182 Sum_probs=67.6
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceee-cCCCCC
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVR-DAPWET 125 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi-~ap~~l 125 (413)
|++++++|+|||+|.||++++++|+++| |+|+|+++.+. .| +|+++.++|++|++ +++.++.|.+ ....++
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~--D~viv~v~~~~----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e~~ 74 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLF--DEVIIGVFINT----SK-QTLFTPEEKKYLIEEATKEMPNVRVIMQETQL 74 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEEC-----------CCCHHHHHHHHHHHHTTCTTEEEEEECSSC
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHC--CCeEEEEecCC----CC-CCCCCHHHHHHHHHHHHccCCCEEEeeCCCCc
Confidence 5789999999999999999999999997 79999998774 33 58999999999999 5899999987 544468
Q ss_pred hHHHHHHhc
Q psy5600 126 DDEFLAKHK 134 (413)
Q Consensus 126 ~~dfi~~~~ 134 (413)
+.+++++++
T Consensus 75 tvd~~~~l~ 83 (171)
T 3nd5_A 75 TVESAKSLG 83 (171)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHCC
Confidence 999999999
No 13
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.61 E-value=2e-15 Score=137.28 Aligned_cols=80 Identities=15% Similarity=0.145 Sum_probs=68.4
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-ccccCceeecCCCCCh
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRYVDEVVRDAPWETD 126 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~VDeVvi~ap~~l~ 126 (413)
++++++.|+|||+|.||++++++|+++| |+|+|+++.+. .| +|+++.++|++|++. ++.++.|.+....+++
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~--d~viv~v~~~p----~K-~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 75 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVCVLKNS----KK-EGTFSLEERMDLIEQSVKHLPNVKVHQFSGLL 75 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEEECC----------CCSCHHHHHHHHHHHTTTCTTEEEEECCSCH
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC--CEEEEEEcCCC----CC-CCCCCHHHHHHhHHHHhcCCCCEEEEEcCCCH
Confidence 5789999999999999999999999997 79999999875 33 699999999999995 7889988876555689
Q ss_pred HHHHHHhc
Q psy5600 127 DEFLAKHK 134 (413)
Q Consensus 127 ~dfi~~~~ 134 (413)
.+++++++
T Consensus 76 vd~~~~l~ 83 (168)
T 3f3m_A 76 VDYCEQVG 83 (168)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHcC
Confidence 99999998
No 14
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.59 E-value=2.2e-15 Score=129.46 Aligned_cols=118 Identities=22% Similarity=0.255 Sum_probs=87.8
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC-CCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDEKKFRFQNKIEEFKDRSKRVMENIG 339 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg-~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~ 339 (413)
++++++.|+||.+|.||+.+|++|+++ ++.++|++++|..... ++ .|+++.++|+++++ ++.+||.++.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~--~~~~~v~v~~~~~~~~-~~~~~l~~~~eR~~~l~-------~~~~~d~v~~ 70 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREM--GDYLIVALSTDEFNQI-KHKKSYYDYEQRKMMLE-------SIRYVDLVIP 70 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHT--SSEEEEEEECHHHHHH-TTCCCSSCHHHHHHHHH-------TBTTCCEEEE
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHh--CCcEEEEEECCHHHhc-cCCCCCCCHHHHHHHHH-------hcCCCCEEEE
Confidence 468999999999999999999999999 5789999999985532 33 58999999999998 6777777665
Q ss_pred c-chhhhhHhHHhhchhhhccceeeeecCCCccchhhhhHHHhhhhcCCCCCCCCCCC
Q psy5600 340 E-RRVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAFSPPASPTRSRG 396 (413)
Q Consensus 340 ~-~~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 396 (413)
. .+.++++.+++..+++ ++.|.||.+. +..+++. .++...|+.+..|.+
T Consensus 71 ~~~~~~~~~~~~~~~~~~-----iv~G~D~~~~--~~~L~~~-~~v~~i~~~~~iSST 120 (132)
T 2b7l_A 71 EKGWGQKEDDVEKFDVDV-----FVMGHDWEGE--FDFLKDK-CEVIYLKRTEGISTT 120 (132)
T ss_dssp ECCGGGHHHHHHHTTCCE-----EEECGGGTTT--TGGGTTT-SEEEECSSCC-----
T ss_pred CCChHHHHHHHHHcCCCE-----EEECCCCcCc--HHHHHhC-CEEEEECCCCCcCHH
Confidence 3 3345666788888887 8899999654 4555543 456666664444433
No 15
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.58 E-value=6.4e-15 Score=133.50 Aligned_cols=80 Identities=23% Similarity=0.289 Sum_probs=69.7
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecCCCCCh
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDAPWETD 126 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~ap~~l~ 126 (413)
..++++.|+|||+|.||+.++++|+++| |+|+|+++++. .| +|+++.++|++|++ +++.++.|.+....+++
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~--D~viv~v~~~~----~k-k~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~t 84 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENP----RK-KCMFTLEERKKLIEEVLSDLDGVKVDVHHGLL 84 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCT----TC-CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHC--CEEEEEEeCCC----CC-CCCCCHHHHHHHHHHHhcCCCCEEEecCcchH
Confidence 3579999999999999999999999997 79999999984 23 48999999999999 79999998875433489
Q ss_pred HHHHHHhc
Q psy5600 127 DEFLAKHK 134 (413)
Q Consensus 127 ~dfi~~~~ 134 (413)
.+++++++
T Consensus 85 vd~l~~l~ 92 (173)
T 1vlh_A 85 VDYLKKHG 92 (173)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhC
Confidence 99999988
No 16
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.57 E-value=2.4e-15 Score=128.55 Aligned_cols=116 Identities=22% Similarity=0.288 Sum_probs=86.9
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
++++++.|+||.+|.||+.+|++|+++ +|.++|+++.|......+..|+++.++|+++++ +++++|.++..
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~--~d~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~-------~~~~~d~v~~~ 71 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQL--GDYLVVAISTDEFNLQKQKKAYHSYEHRKLILE-------TIRYVDEVIPE 71 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTT--SSEEEEEEECHHHHHHHTCCCSSCHHHHHHHHT-------TBTTCCEEEEE
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHh--CCCeEEEEECCHHHhcCCCCCCCCHHHHHHHHH-------hcCCCCEEEeC
Confidence 368899999999999999999999999 589999999998432222268999999999998 67777766654
Q ss_pred c-hhhhhHhHHhhchhhhccceeeeecCCCccchhhhhHHHhhhhcCCCCCCCC
Q psy5600 341 R-RVDMIQKWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQAFSPPASPTR 393 (413)
Q Consensus 341 ~-~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~~~~~~~k~~~~~~~~~~~~~~~ 393 (413)
. ..++++.++++.+++ ++.|.||.++ +..+++ +.++...|+.+..
T Consensus 72 ~~~~~~~~~l~~~~~~~-----iv~G~D~~~~--~~~L~~-~~~v~~~~~~~~i 117 (129)
T 1coz_A 72 KNWEQKKQDIIDHNIDV-----FVMGDDWEGK--FDFLKD-QCEVVYLPRTEGI 117 (129)
T ss_dssp CCSTTHHHHHHHTTCSE-----EEEEGGGTTT--TGGGTT-TSEEEEECCCTTC
T ss_pred CCHHHHHHHHHHhCCcE-----EEECCCCCCc--HHHHHh-CCeEEEcCCCCCc
Confidence 3 234566677778776 8899999754 455554 3456666654433
No 17
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.56 E-value=4.6e-15 Score=130.31 Aligned_cols=97 Identities=24% Similarity=0.394 Sum_probs=84.9
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
+++|++.|+||.+|.||+.+|++|+++ ++.++|++++|....+.+.+|+++.++|+++++ ++.+||.++..
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~--~~~~~v~v~~~~~~~~~~~~~l~~~~eR~~~l~-------~~~~vd~v~~~ 72 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKL--GDELVVVVARDSTARNNGKIPIFDENSRLALIS-------ELKVVDRAILG 72 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTT--SSEEEEEECCHHHHHHTTCCCSSCHHHHHHHHT-------TBTTCSEEEEC
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHh--CCCcEEEEECCcchhhcCCCCCCCHHHHHHHHH-------hcCCCCEEEEc
Confidence 678999999999999999999999999 688999999999887633368999999999998 77789988887
Q ss_pred chhhhhHhHHhhchhhhccceeeeecCCCcc
Q psy5600 341 RRVDMIQKWEEKSRDIIDTFLLLFGREGRLK 371 (413)
Q Consensus 341 ~~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~ 371 (413)
...++++.+++++++. ++.|.||+.+
T Consensus 73 ~~~~f~~~~~~l~~~~-----iv~G~d~~f~ 98 (143)
T 3glv_A 73 HEGDMMKTVIEVKPDI-----ITLGYDQKFD 98 (143)
T ss_dssp CTTCHHHHHHHHCCSE-----EEECTTCHHH
T ss_pred CchhHHHHHHhcCCCE-----EEECCCCCCC
Confidence 7777777788888888 9999999754
No 18
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.55 E-value=2.6e-14 Score=125.49 Aligned_cols=80 Identities=16% Similarity=0.225 Sum_probs=67.2
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecCCCCCh
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDAPWETD 126 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~ap~~l~ 126 (413)
|+++++.|+|||+|.||+.++++|++.+ |.|+|+++.|. +| +++++.++|++|++ ++..+|.+.+......+
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~--d~v~v~~~~~p----~k-~~~~~~~~R~~ml~~a~~~~~~v~v~~~~~~~ 73 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASP----SK-KPMFTLEERVALAQQATAHLGNVEVVGFSDLM 73 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCC----SS-CCSSCHHHHHHHHHHHTTTCTTEEEEEECSCH
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC--CEEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhcCCCeEEcccchHH
Confidence 4689999999999999999999999997 78999999874 34 57999999999999 58999998775322467
Q ss_pred HHHHHHhc
Q psy5600 127 DEFLAKHK 134 (413)
Q Consensus 127 ~dfi~~~~ 134 (413)
.+++++++
T Consensus 74 ~~~l~~l~ 81 (158)
T 1qjc_A 74 ANFARNQH 81 (158)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 78888777
No 19
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.48 E-value=2.3e-13 Score=121.48 Aligned_cols=80 Identities=15% Similarity=0.241 Sum_probs=66.3
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecCCCCCh
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDAPWETD 126 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~ap~~l~ 126 (413)
++++++.|+|||+|.||+.++++|++.+ |.|+|.++.+. .| +++++.+||++|++ ++..+|.+.+......+
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~--d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~a~~~~~~v~v~~~e~~~ 74 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVLNNS----SK-KPLFSVEERCELLREVTKDIPNITVETSQGLL 74 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCC----SS-CCSSCHHHHHHHHHHHHTTCTTEEEEECSSCH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC--CEEEEEECCCC----cc-CCCCCHHHHHHHHHHHHhcCCCEEEcccchHH
Confidence 4689999999999999999999999997 78999988653 23 57999999999999 57899988775322467
Q ss_pred HHHHHHhc
Q psy5600 127 DEFLAKHK 134 (413)
Q Consensus 127 ~dfi~~~~ 134 (413)
.+++++++
T Consensus 75 ~~~l~~l~ 82 (169)
T 1o6b_A 75 IDYARRKN 82 (169)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHcC
Confidence 77887777
No 20
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.47 E-value=2.7e-14 Score=128.54 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=84.8
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
++++++.|+||.+|.||++++++|+++ +|+||||+++|. .| +|+++.++|++|++. +++.++.+...
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~--~D~viv~v~~~~----~K-~~~~~~~eR~~ml~~------a~~~~~~v~v~ 68 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSEL--FEKLIVAVAHSS----AK-NPMFSLDERLKMIQL------ATKSFKNVECV 68 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTT--SSEEEEEEECCG----GG-CCSSCHHHHHHHHHH------HHTTSTTEEEE
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHh--CCceEEEEccCC----CC-CCCCCHHHHHHHHHH------HhcCCCcEEEE
Confidence 578999999999999999999999999 599999999886 23 699999999999872 45556554333
Q ss_pred chhh-hhHhHHhhchhhhccceeeee----cCCCccchhhhhHHHh---hhhcCCCCCC
Q psy5600 341 RRVD-MIQKWEEKSRDIIDTFLLLFG----REGRLKHMWNEGKGKF---LQAFSPPASP 391 (413)
Q Consensus 341 ~~~d-~~~~~e~~~~Dii~~f~~~~G----~Dw~~~~~~~~~k~~~---~~~~~~~~~~ 391 (413)
...+ ..+.++++++|+ ++.| .||.....+......| .+.+.+|++|
T Consensus 69 ~~~~l~~~~~~~~~~~~-----ivrG~r~~~D~~ye~~~a~~n~~l~~~ietv~l~~~~ 122 (157)
T 3nv7_A 69 AFEGLLAYLAKEYHCKV-----LVRGLRVVSDFEYELQMGYANKSLNHELETLYFMPTL 122 (157)
T ss_dssp EECSCHHHHHHHTTCCC-----BCCCCSCCCCHHHHHHHHHHHHHSSCCCCCCCCCCCH
T ss_pred ecCchHHHHHHHcCCCE-----EEECCcccchhhhhHHHHHHHHHhCCCceEEEEcCCc
Confidence 2222 567788899998 8999 8887554433433443 2566677776
No 21
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.43 E-value=6.5e-13 Score=116.98 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=64.2
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCC-CCCCCHHHHHHHHH-hccccCceeecCCCCC
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDIERYEAVR-HCRYVDEVVRDAPWET 125 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg-~Pv~~~eER~~~V~-a~r~VDeVvi~ap~~l 125 (413)
|+ +++.|+|||+|.||+.++++|++.+ |.++|+++.+. +|+ .++++.++|++|++ ++..+|.+.+...-..
T Consensus 1 m~-~v~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~~~~~p----~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~ 73 (160)
T 1od6_A 1 MH-VVYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVLENP----SKRGQYLFSAEERLAIIREATAHLANVEAATFSGL 73 (160)
T ss_dssp CE-EEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECC---------CCSSCHHHHHHHHHHHTTTCTTEEEEEECSC
T ss_pred Ce-EEEEeeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCC----CCCCCCCCCHHHHHHHHHHHhcCCCCEEEEecCch
Confidence 44 8999999999999999999999997 68999998664 233 47999999999999 5788998776532247
Q ss_pred hHHHHHHhc
Q psy5600 126 DDEFLAKHK 134 (413)
Q Consensus 126 ~~dfi~~~~ 134 (413)
+.+++++++
T Consensus 74 ~~~~l~~l~ 82 (160)
T 1od6_A 74 LVDFVRRVG 82 (160)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 778888887
No 22
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=99.42 E-value=5.3e-13 Score=120.57 Aligned_cols=83 Identities=10% Similarity=-0.045 Sum_probs=67.2
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCC-CCCCCHHHHHHHHH-hccccCceeecCCC--
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDIERYEAVR-HCRYVDEVVRDAPW-- 123 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg-~Pv~~~eER~~~V~-a~r~VDeVvi~ap~-- 123 (413)
++++++.|+|||+|.||+.++++|++.+..|.|++.++++.. .|+ +++++.++|++|++ +++.+|.+.+. +|
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~~~~~~~~v~v~-~~e~ 77 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPP---HKQGRNITSVESRLQMLELATEAEEHFSIC-LEEL 77 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCT---TCTTSCCCCHHHHHHHHHHHHTTCTTEEEC-CTGG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCC---CccCCCCCCHHHHHHHHHHHhCCCCCEEEe-hHHh
Confidence 368999999999999999999999998755899999998763 232 57999999999999 58899988874 34
Q ss_pred -----CChHHHHHHhc
Q psy5600 124 -----ETDDEFLAKHK 134 (413)
Q Consensus 124 -----~l~~dfi~~~~ 134 (413)
..+.+.+++++
T Consensus 78 ~~~~~~~~~~~l~~l~ 93 (189)
T 2qtr_A 78 SRKGPSYTYDTMLQLT 93 (189)
T ss_dssp GSCSCCCHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHH
Confidence 36677777776
No 23
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=99.39 E-value=2.8e-12 Score=117.09 Aligned_cols=82 Identities=11% Similarity=-0.060 Sum_probs=63.3
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCC-CCCCCHHHHHHHHH-hccccCceeecCCC---
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDIERYEAVR-HCRYVDEVVRDAPW--- 123 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg-~Pv~~~eER~~~V~-a~r~VDeVvi~ap~--- 123 (413)
+++++.|+|||+|.||+.++++|++.+..|.|+++++.+.. .|+ +++++.++|++|++ +++.+|.+.+. +|
T Consensus 8 ~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~-~~e~~ 83 (194)
T 1kam_A 8 KIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKLAIQSNPSFKLE-LVEME 83 (194)
T ss_dssp EEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHHHHTTCTTEEEC-CGGGS
T ss_pred EEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHHHHcCCCCeEEe-HHHhc
Confidence 68999999999999999999999998755789999987752 343 57999999999999 58999998874 33
Q ss_pred ----CChHHHHHHhc
Q psy5600 124 ----ETDDEFLAKHK 134 (413)
Q Consensus 124 ----~l~~dfi~~~~ 134 (413)
..+.+.+++++
T Consensus 84 ~~~~~~t~~~l~~l~ 98 (194)
T 1kam_A 84 REGPSYTFDTVSLLK 98 (194)
T ss_dssp TTCCCSHHHHHHHHH
T ss_pred CCCCCChHHHHHHHH
Confidence 36777777776
No 24
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.37 E-value=1.6e-13 Score=124.00 Aligned_cols=113 Identities=12% Similarity=0.101 Sum_probs=75.2
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIG 339 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~ 339 (413)
.++++++.|+||.+|.||++++++|+++ +|+|+||+++|. .| +|+++.++|++|++. ++.. +.+..
T Consensus 4 mm~i~i~~GsFDPiH~GHl~li~~A~~~--~d~viv~v~~~~----~K-~~~~~~~~R~~m~~~------~~~~-~~v~V 69 (162)
T 4f3r_A 4 MKPIAIYPGTFDPLTNGHVDIIERALPL--FNKIIVACAPTS----RK-DPHLKLEERVNLIAD------VLTD-ERVEV 69 (162)
T ss_dssp -CCEEEEEECCTTCCHHHHHHHHHHGGG--CSEEEEEECCC-----------CCHHHHHHHHHH------HCCC-TTEEE
T ss_pred ceEEEEEEEEcCCCCHHHHHHHHHHHHH--CCcEEEEEecCC----cc-CCCCCHHHHHHHHHH------hhCC-CCEEE
Confidence 4689999999999999999999999999 599999999885 23 699999999999972 2222 33222
Q ss_pred cchh-hhhHhHHhhchhhhccceeeee----cCCCccchhhhhHHHh---hhhcCCCCCC
Q psy5600 340 ERRV-DMIQKWEEKSRDIIDTFLLLFG----REGRLKHMWNEGKGKF---LQAFSPPASP 391 (413)
Q Consensus 340 ~~~~-d~~~~~e~~~~Dii~~f~~~~G----~Dw~~~~~~~~~k~~~---~~~~~~~~~~ 391 (413)
.... ...+.++++++++ ++.| .||.....+..+.++| .+.+..+++|
T Consensus 70 ~~~~~l~~~~~~~~~~~~-----~v~G~r~~~Df~~e~~~a~~nr~l~~~ietv~l~~~~ 124 (162)
T 4f3r_A 70 LPLTGLLVDFAKTHQANF-----ILRGLRAVSDFDYEFQLAHMNYQLSPEIETIFLPARE 124 (162)
T ss_dssp EECCSCHHHHHHHTTCCE-----EEEEECSHHHHHHHHHHHHHHHHHCTTCEEEEEECCG
T ss_pred EeccchHHHHHHHcCCCE-----EEECCCchhhhhhHHHHHHHHHHhCCCccEEEEECCc
Confidence 2211 2356677788887 8999 6665443333333343 2345556666
No 25
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.36 E-value=1.1e-13 Score=123.11 Aligned_cols=63 Identities=25% Similarity=0.369 Sum_probs=54.1
Q ss_pred EEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-c-ccc
Q psy5600 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-C-RYV 114 (413)
Q Consensus 50 ~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~-r~V 114 (413)
+|++.|+|||+|.||+.++++|++++ -|+|+||+++|...++. ++|+++.++|++|++. + +..
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~-~d~viv~v~~~~~~~k~-~~~~~~~~~R~~ml~~a~~~~~ 66 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLG-GRDITIGVTSDRMARAR-IRSVLPFAIRAENVKRYVMRKY 66 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHH-SCCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhC-CCEEEEEECCCcccccc-CCCCCCHHHHHHHHHHHHhccc
Confidence 68999999999999999999999984 37999999999876432 4799999999999995 6 544
No 26
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.28 E-value=1.7e-12 Score=119.94 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=73.4
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIG 339 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~ 339 (413)
.++++++.|+||.+|.||+.++++|+++ +|+|+|+|++|. .| +|+++.++|+++++ +.++.++.+..
T Consensus 21 ~mki~v~~GsFDpiH~GHl~li~~A~~~--~d~viv~v~~~p----~K-~~l~s~eeR~~ml~------~~~~~v~~v~v 87 (187)
T 3k9w_A 21 SMVVAVYPGTFDPLTRGHEDLVRRASSI--FDTLVVGVADSR----AK-KPFFSLEERLKIAN------EVLGHYPNVKV 87 (187)
T ss_dssp CCCEEEEEECCTTCCHHHHHHHHHHHHH--SSEEEEEEECCG----GG-CCSSCHHHHHHHHH------HHHTTCTTEEE
T ss_pred CcEEEEEEEeCCcCcHHHHHHHHHHHHH--CCcEEEEEecCC----cc-CCCCCHHHHHHHHH------HHhccCCcEEE
Confidence 4689999999999999999999999999 589999999874 22 58999999999988 24566666655
Q ss_pred cchhh-hhHhHHhhchhhhccceeeee----cCCCcc
Q psy5600 340 ERRVD-MIQKWEEKSRDIIDTFLLLFG----REGRLK 371 (413)
Q Consensus 340 ~~~~d-~~~~~e~~~~Dii~~f~~~~G----~Dw~~~ 371 (413)
....+ ..+.++++++++ ++.| .||...
T Consensus 88 ~~f~~~~~d~l~~l~~~~-----iv~G~r~~~Df~~E 119 (187)
T 3k9w_A 88 MGFTGLLKDFVRANDARV-----IVRGLRAVSDFEYE 119 (187)
T ss_dssp EEESSCHHHHHHHTTCSE-----EEEECCTTSCHHHH
T ss_pred EechhhHHHHHHHcCCCE-----EEECCCcccccchH
Confidence 44333 245667777776 8899 676643
No 27
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=99.27 E-value=1.1e-11 Score=117.99 Aligned_cols=85 Identities=16% Similarity=0.124 Sum_probs=70.8
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecC----
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDA---- 121 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~a---- 121 (413)
.++++++.|+|||+|.||+.++++|+++++-|.|+|+++.|.. .|+.++++.++|++|++ +++.++.|.+..
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p---~K~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~ 98 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPP---HRETPQVSAAQRLAMVERAVAGVERLTVDPRELQ 98 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCG---GGSCTTCCHHHHHHHHHHHHTTCTTEEECCGGGG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCC---CCCCCCCCHHHHHHHHHHHhcCCCeEEEeeeeec
Confidence 4678999999999999999999999988755899999999852 24457999999999999 689999888753
Q ss_pred --CCCChHHHHHHhc
Q psy5600 122 --PWETDDEFLAKHK 134 (413)
Q Consensus 122 --p~~l~~dfi~~~~ 134 (413)
.+.++.+.++.++
T Consensus 99 ~~~~sytvdtl~~l~ 113 (242)
T 1yum_A 99 RDKPSYTIDTLESVR 113 (242)
T ss_dssp SSSSCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
Confidence 2258888888775
No 28
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=99.26 E-value=1.4e-11 Score=112.54 Aligned_cols=134 Identities=13% Similarity=0.094 Sum_probs=84.7
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-ccccC--ceeecC---
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRYVD--EVVRDA--- 121 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~VD--eVvi~a--- 121 (413)
++++++.|+|||+|.||+.+++ |.+.+ |+|+|+++.+. ..++++++.++|++|++. ++..+ .+.+..
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~--d~v~~~p~~~~----~~k~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E~ 74 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF--DLVLLEPSIAH----AWGKNMLDYPIRCKLVDAFIKDMGLSNVQRSDLEQ 74 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS--SEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEEECCHHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC--CEEEEEECCCC----CCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEehhh
Confidence 4689999999999999999998 87776 79999999862 123579999999999994 65442 333211
Q ss_pred -----C-CCChHHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceee-eeecCCCCcc
Q psy5600 122 -----P-WETDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERID-FIAHDDIPYM 194 (413)
Q Consensus 122 -----p-~~l~~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~-~~~~~~~~~~ 194 (413)
. ...|.+-++.++ ..-|+ .+ +.+.|.|...
T Consensus 75 ~l~~~~~~syT~dTl~~l~-------~~~p~------------------------------------~~~~~iiG~D~l~ 111 (177)
T 3h05_A 75 ALYQPGQSVTTYALLEKIQ-------EIYPT------------------------------------ADITFVIGPDNFF 111 (177)
T ss_dssp HHC----CCCHHHHHHHHH-------HHSTT------------------------------------SEEEEEECHHHHH
T ss_pred hcccCCCCcchHHHHHHHH-------HHhcC------------------------------------CCeEEEEecchhh
Confidence 1 335555566554 00011 22 2333544332
Q ss_pred C-ccccchHHHHHhCCeEEEcCCCCCCCHHHHHHHHHhc
Q psy5600 195 S-EFGTDVYAHLKARGMFVATQRTEGVSTSDIVARIVRD 232 (413)
Q Consensus 195 ~-~~~~d~y~~~ke~Gi~v~i~RT~gVSTSdII~RI~~~ 232 (413)
+ ..+.+.-+.++.. -++.++|...+|+|+|.++|...
T Consensus 112 ~l~~W~~~~~l~~~~-~~vv~~r~~~iSST~IR~~i~~g 149 (177)
T 3h05_A 112 KFAKFYKAEEITERW-TVMACPEKVKIRSTDIRNALIEG 149 (177)
T ss_dssp TGGGSTTHHHHHHHS-EEEECCCSSCCCHHHHHHHHHHT
T ss_pred hcccchhHHHHHHhC-CEEEEcCCCCCcHHHHHHHHHcC
Confidence 2 2344433445554 45667889999999999999754
No 29
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=99.25 E-value=1.3e-11 Score=114.48 Aligned_cols=82 Identities=12% Similarity=0.096 Sum_probs=66.3
Q ss_pred E-EEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecC------
Q psy5600 50 R-VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDA------ 121 (413)
Q Consensus 50 ~-V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~a------ 121 (413)
+ +++.|+|||+|.||+.++++|++.+.-|.|++.++.+.. .|..++++.++|++|++ +++.+|.|.+..
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~~~ 80 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP---HRPQPEANSVQRKHMLELAIADKPLFTLDERELKRN 80 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCT---TSCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHHCS
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCC---CCCCCCCCHHHHHHHHHHHhccCCCEEEeHHHhcCC
Confidence 5 899999999999999999999988744789999988753 24347999999999999 789999988742
Q ss_pred CCCChHHHHHHhc
Q psy5600 122 PWETDDEFLAKHK 134 (413)
Q Consensus 122 p~~l~~dfi~~~~ 134 (413)
....+.++++.+.
T Consensus 81 ~~s~t~~~l~~l~ 93 (213)
T 1k4m_A 81 APSYTAQTLKEWR 93 (213)
T ss_dssp SCCCHHHHHHHHH
T ss_pred CCCcHHHHHHHHH
Confidence 1245778887763
No 30
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=99.25 E-value=1e-11 Score=121.96 Aligned_cols=128 Identities=16% Similarity=0.156 Sum_probs=91.1
Q ss_pred EEEcCccCCCChHHHHHHHHHhhcCCCCE---EEEEEecCc---ccccCCCCCCCCHHHHHHHHHhccccCceeecCCC-
Q psy5600 51 VYADGIYDMFHQGHSRQLMQAKNVFPNVY---LIVGVCSDA---LTHRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPW- 123 (413)
Q Consensus 51 V~~~G~FDlfH~GHi~~L~qAk~lf~gd~---LIVGV~sDe---~v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~- 123 (413)
|++-|+||.+|.||..+|++|++++ +. ..|+++-|. .....+.+|+++++||+++++++. ++.|+ ||
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~a--~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~~lg-~~~v~---~F~ 75 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEIA--FFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLSRYA-RTVVL---DFF 75 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHH--HHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHTTTS-CEEEE---CHH
T ss_pred EEEEeeCccccHHHHHHHHHHHHHH--HHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHHhCC-CEEEE---EhH
Confidence 6788999999999999999999884 33 224455453 222222357999999999999998 55554 43
Q ss_pred ----CChHHHHHH--hccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCcc
Q psy5600 124 ----ETDDEFLAK--HKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSEF 197 (413)
Q Consensus 124 ----~l~~dfi~~--~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~~ 197 (413)
....+|++. ++ ++.++.|+|+.....
T Consensus 76 ~~a~ls~~~Fi~~ill~------------------------------------------------~~~iVvG~Df~fG~~ 107 (293)
T 1mrz_A 76 RIKDLTPEGFVERYLSG------------------------------------------------VSAVVVGRDFRFGKN 107 (293)
T ss_dssp HHTTCCHHHHHHHHCTT------------------------------------------------CCEEEEETTCCBSGG
T ss_pred HhhcCCHHHHHHHHhcC------------------------------------------------CCEEEECCCCCCCCC
Confidence 344667766 45 678888888876544
Q ss_pred ccchHHHHHhCCe-EEEcCC----CCCCCHHHHHHHHHhc
Q psy5600 198 GTDVYAHLKARGM-FVATQR----TEGVSTSDIVARIVRD 232 (413)
Q Consensus 198 ~~d~y~~~ke~Gi-~v~i~R----T~gVSTSdII~RI~~~ 232 (413)
...-++.|++.|. ++.++. ...+|||.|.+.|..-
T Consensus 108 ~~g~~~~L~~~G~~V~~v~~~~~~~~~iSST~IR~~L~~G 147 (293)
T 1mrz_A 108 ASGNASFLRKKGVEVYEIEDVVVQGKRVSSSLIRNLVQEG 147 (293)
T ss_dssp GCBCHHHHHHTTCEEEEECCCEETTEECCHHHHHHHHHTT
T ss_pred CCCCHHHHHhCCCEEEEECCEEeCCccccHhHHHHHHhcC
Confidence 4444677888886 455554 4579999999888653
No 31
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.19 E-value=9.3e-12 Score=113.04 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=64.5
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
++++++.|+||.+|.||+.++++|++++ |+|+|+++.+. .| +|+++.++|++|++. +++.++.+...
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~--d~viv~v~~~p----~K-~~~~~~~~R~~ml~~------a~~~~~~v~v~ 69 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVCVLKNS----KK-EGTFSLEERMDLIEQ------SVKHLPNVKVH 69 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEEECC----------CCSCHHHHHHHHHH------HTTTCTTEEEE
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC--CEEEEEEcCCC----CC-CCCCCHHHHHHhHHH------HhcCCCCEEEE
Confidence 5789999999999999999999999995 89999999865 33 689999999999872 33333332222
Q ss_pred chhh-hhHhHHhhchhhhccceeeeecC
Q psy5600 341 RRVD-MIQKWEEKSRDIIDTFLLLFGRE 367 (413)
Q Consensus 341 ~~~d-~~~~~e~~~~Dii~~f~~~~G~D 367 (413)
...+ .++.+++++.++ ++.|.|
T Consensus 70 ~~e~~tvd~~~~l~~~~-----~I~G~d 92 (168)
T 3f3m_A 70 QFSGLLVDYCEQVGAKT-----IIRGLR 92 (168)
T ss_dssp ECCSCHHHHHHHHTCCE-----EEEEEC
T ss_pred EcCCCHHHHHHHcCCCE-----EEEcCC
Confidence 2212 246667777777 889933
No 32
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.19 E-value=4.7e-11 Score=118.33 Aligned_cols=71 Identities=21% Similarity=0.203 Sum_probs=57.6
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCccc-----ccCCCCCCCCHHHHHHHHH-hccccCc-eee
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALT-----HRKKGRTVMNDIERYEAVR-HCRYVDE-VVR 119 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v-----~~~Kg~Pv~~~eER~~~V~-a~r~VDe-Vvi 119 (413)
+++++++.|+|||+|.||+.++++|+++| |+|+|+|+++..- +..+.+..++.+||++||+ +++..+. |.+
T Consensus 1 ~~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~~~~v 78 (365)
T 1lw7_A 1 EKKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKNQIFI 78 (365)
T ss_dssp CCCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTTTEEE
T ss_pred CCcEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCCcEEE
Confidence 35689999999999999999999999997 8999999999742 1112233499999999998 5787776 554
No 33
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=99.18 E-value=7e-12 Score=114.16 Aligned_cols=89 Identities=17% Similarity=0.268 Sum_probs=65.6
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc-
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIG- 339 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~- 339 (413)
++++++.|+||.+|.||+.++++|+++| |+|+|+++++. .| +|.++.++|++|++ .+++.++.+..
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~--D~viv~v~~~~----~K-~~~~~~~~R~~ml~------~a~~~~~~v~v~ 68 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLF--DEVIIGVFINT----SK-QTLFTPEEKKYLIE------EATKEMPNVRVI 68 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEEC-----------CCCHHHHHHHHH------HHHTTCTTEEEE
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHC--CCeEEEEecCC----CC-CCCCCHHHHHHHHH------HHHccCCCEEEe
Confidence 5789999999999999999999999995 89999998764 23 48999999999987 24555555443
Q ss_pred cchhh-hhHhHHhhchhhhccceeeeecC
Q psy5600 340 ERRVD-MIQKWEEKSRDIIDTFLLLFGRE 367 (413)
Q Consensus 340 ~~~~d-~~~~~e~~~~Dii~~f~~~~G~D 367 (413)
....+ .++.++++++++ ++.|.|
T Consensus 69 ~~~e~~tvd~~~~l~~~~-----~i~G~~ 92 (171)
T 3nd5_A 69 MQETQLTVESAKSLGANF-----LIRGIR 92 (171)
T ss_dssp EECSSCHHHHHHHHTCCE-----EEEEEC
T ss_pred eCCCCcHHHHHHHCCCCE-----EEECCC
Confidence 22112 356677788887 889954
No 34
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.17 E-value=2.1e-10 Score=102.63 Aligned_cols=64 Identities=17% Similarity=0.257 Sum_probs=51.9
Q ss_pred EEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEE-ecCcccccCCCCCCCCHHHHHHHHH-hccccC-cee
Q psy5600 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGV-CSDALTHRKKGRTVMNDIERYEAVR-HCRYVD-EVV 118 (413)
Q Consensus 50 ~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV-~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VD-eVv 118 (413)
++++.|+|||+|.||+.++++|++++ |.|+|+| +.+. -+|+.+.++.++|++|++ +++..+ .+.
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~---p~~~~~~~~~~~R~~m~~~~~~~~~~~v~ 68 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIGIGSAQK---SHTLENPFTAGERILMITQSLKDYDLTYY 68 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTC---CSSSSCCSCHHHHHHHHHHHHTTSSCEEE
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC--CeEEEEEcCCCC---CCCCCCCCCHHHHHHHHHHHHhcCCCceE
Confidence 68999999999999999999999996 7999999 4443 123345679999999999 577776 443
No 35
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=99.17 E-value=6.9e-11 Score=107.44 Aligned_cols=84 Identities=10% Similarity=-0.062 Sum_probs=66.4
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCC-CCCCCHHHHHHHHH-hccccCceeecC----
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDIERYEAVR-HCRYVDEVVRDA---- 121 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg-~Pv~~~eER~~~V~-a~r~VDeVvi~a---- 121 (413)
|+++++.|+|||+|.||+.++++|++.++.|.+++..+.+... |+ .++++.++|++|++ +++..+.|.+..
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~---k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e~~ 78 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPL---KKHHDFIDVQHRLTMIQMIIDELGFGDICDDEIK 78 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTT---SCCCSSCCCHHHHHHHHHHHHHHTCCEECCHHHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCC---CcCCCCCCHHHHHHHHHHHHcCCCCEEEehHHhc
Confidence 3678999999999999999999999887558888877777532 32 57999999999999 588888776642
Q ss_pred --CCCChHHHHHHhc
Q psy5600 122 --PWETDDEFLAKHK 134 (413)
Q Consensus 122 --p~~l~~dfi~~~~ 134 (413)
....+.+.++.++
T Consensus 79 ~~~~syt~dtl~~l~ 93 (189)
T 2h29_A 79 RGGQSYTYDTIKAFK 93 (189)
T ss_dssp HCSBCCHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHH
Confidence 1236777777765
No 36
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.15 E-value=2.1e-10 Score=103.82 Aligned_cols=62 Identities=21% Similarity=0.177 Sum_probs=50.6
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-cccc
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRYV 114 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~V 114 (413)
+++++.|+|||+|.||..++++|++++ |.|+|+|.++..- +|++++++.++|++|++. +...
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~--d~v~v~v~~~~~p--~~~~~~~~~~~R~~~~~~a~~~~ 66 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEV--DELIICIGSAQLS--HSIRDPFTAGERVMMLTKALSEN 66 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEEECSTTCC--SSSSSCSCHHHHHHHHHHHHHHT
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhC--CeeEEEECCCCCC--cCCCCCCCHHHHHHHHHHHHhhC
Confidence 479999999999999999999999996 7899999554321 234568899999999995 5654
No 37
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.06 E-value=2.3e-10 Score=100.27 Aligned_cols=93 Identities=15% Similarity=0.224 Sum_probs=69.5
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
++++++.|+||.+|.||+.++++|++.+ |.++|+++.+. .| +++++.++|++|++ .++..++.+...
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~--d~v~v~~~~~p----~k-~~~~~~~~R~~ml~------~a~~~~~~v~v~ 67 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAIAASP----SK-KPMFTLEERVALAQ------QATAHLGNVEVV 67 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEEESCC----SS-CCSSCHHHHHHHHH------HHTTTCTTEEEE
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC--CEEEEEECCCC----CC-CCCCCHHHHHHHHH------HHHhcCCCeEEc
Confidence 4689999999999999999999999994 89999999874 24 57899999999997 245555554433
Q ss_pred chhh-hhHhHHhhchhhhccceeeeecCCCcc
Q psy5600 341 RRVD-MIQKWEEKSRDIIDTFLLLFGREGRLK 371 (413)
Q Consensus 341 ~~~d-~~~~~e~~~~Dii~~f~~~~G~Dw~~~ 371 (413)
...+ .++.++++++++ ++.|.|+..+
T Consensus 68 ~~~~~~~~~l~~l~~~~-----~v~G~d~~~~ 94 (158)
T 1qjc_A 68 GFSDLMANFARNQHATV-----LIRGLRAVAD 94 (158)
T ss_dssp EECSCHHHHHHHTTCCE-----EEEECCTTCC
T ss_pred ccchHHHHHHHHcCCCE-----EEEeccchhh
Confidence 2222 234566666665 7899886554
No 38
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.06 E-value=7.6e-11 Score=108.26 Aligned_cols=92 Identities=11% Similarity=0.141 Sum_probs=68.9
Q ss_pred eccceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHH
Q psy5600 258 TSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMEN 337 (413)
Q Consensus 258 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~v 337 (413)
..++++++..|+||.+|.||+.++++|++++ |+|+|+++.+. .| +|.++.++|++|++ ++++..+.+
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~--D~Viv~v~~np----~K-~~~~s~eeR~~mv~------~a~~~~~~v 84 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVAILVNP----AK-TGMFDLDERIAMVK------ESTTHLPNL 84 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCT----TS-CCSSCHHHHHHHHH------HHCTTCTTE
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCC----CC-CCCCCHHHHHHHHH------HHhCCCCCE
Confidence 4567899999999999999999999999995 99999999874 23 48999999999987 244444433
Q ss_pred hccchhh-hhHhHHhhchhhhccceeeeecC
Q psy5600 338 IGERRVD-MIQKWEEKSRDIIDTFLLLFGRE 367 (413)
Q Consensus 338 v~~~~~d-~~~~~e~~~~Dii~~f~~~~G~D 367 (413)
......+ .++.+++++.++ ++-|-+
T Consensus 85 ~V~~~e~l~vd~~~~~~a~~-----ivrGlr 110 (177)
T 3nbk_A 85 RVQVGHGLVVDFVRSCGMTA-----IVKGLR 110 (177)
T ss_dssp EEEECCSCHHHHHHHTTCCE-----EEEEEC
T ss_pred EEEecCchHHHHHHHcCCCE-----EEECCC
Confidence 3333223 356677777776 778843
No 39
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.06 E-value=1.8e-10 Score=104.20 Aligned_cols=83 Identities=13% Similarity=0.221 Sum_probs=62.6
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
..|+++.|+||.+|.||+.++++|+++| |+|+|+++++. .| +|+++.++|++|++ .+++.++.+...
T Consensus 12 ~~i~i~~GsFdP~H~GHl~l~~~A~~~~--D~viv~v~~~~----~k-k~~~~~~~R~~ml~------~a~~~~~~v~v~ 78 (173)
T 1vlh_A 12 HMKAVYPGSFDPITLGHVDIIKRALSIF--DELVVLVTENP----RK-KCMFTLEERKKLIE------EVLSDLDGVKVD 78 (173)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEEECCT----TC-CCSSCHHHHHHHHH------HHTTTCTTEEEE
T ss_pred ceEEEEEEEECcCcHHHHHHHHHHHHHC--CEEEEEEeCCC----CC-CCCCCHHHHHHHHH------HHhcCCCCEEEe
Confidence 4589999999999999999999999995 99999999973 22 48999999999987 245554443332
Q ss_pred chhh-hhHhHHhhchhh
Q psy5600 341 RRVD-MIQKWEEKSRDI 356 (413)
Q Consensus 341 ~~~d-~~~~~e~~~~Di 356 (413)
...+ .++.+++++.++
T Consensus 79 ~~e~~tvd~l~~l~~~~ 95 (173)
T 1vlh_A 79 VHHGLLVDYLKKHGIKV 95 (173)
T ss_dssp EECSCHHHHHHHHTCCE
T ss_pred cCcchHHHHHHHhCCCe
Confidence 2212 356677777776
No 40
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=98.97 E-value=2e-09 Score=107.48 Aligned_cols=138 Identities=11% Similarity=0.108 Sum_probs=92.3
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhhcCCC-CEEEEEEecCccc----ccCC-CCCCCCHHHHHHHHHhccccCceeecCC
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKNVFPN-VYLIVGVCSDALT----HRKK-GRTVMNDIERYEAVRHCRYVDEVVRDAP 122 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~lf~g-d~LIVGV~sDe~v----~~~K-g~Pv~~~eER~~~V~a~r~VDeVvi~ap 122 (413)
..|++-|+||.+|.||..+|++|+++++. ....|+++-|..- ...+ .+++++.++|+++|+++. ||.|++. |
T Consensus 16 ~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~g-VD~v~v~-~ 93 (338)
T 2x0k_A 16 NSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESFG-IDGVLVI-D 93 (338)
T ss_dssp CEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHTT-CSEEEEE-C
T ss_pred CeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhcC-CCEEEEc-c
Confidence 37899999999999999999999987410 1257778777632 2112 256999999999999987 9998874 3
Q ss_pred CC------ChHHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCccCc
Q psy5600 123 WE------TDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYMSE 196 (413)
Q Consensus 123 ~~------l~~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~~~ 196 (413)
|+ ...+|++++=+. +. +++.++.|+|+....
T Consensus 94 F~~~~a~ls~e~Fi~~il~~-----------------------~l--------------------~~~~ivvG~Df~FG~ 130 (338)
T 2x0k_A 94 FTRELSGTSPEKYVEFLLED-----------------------TL--------------------HASHVVVGANFTFGE 130 (338)
T ss_dssp TTTSSSSCCHHHHHHHCCCC-----------------------CT--------------------CEEEEEEETTCEESG
T ss_pred ccHHHHhCCHHHHHHHHHHh-----------------------hc--------------------CCCEEEEeecCCCCC
Confidence 32 345677763200 00 167788888886544
Q ss_pred cccchHHHHHhC---Ce-EEEcCC----CCCCCHHHHHHHHHh
Q psy5600 197 FGTDVYAHLKAR---GM-FVATQR----TEGVSTSDIVARIVR 231 (413)
Q Consensus 197 ~~~d~y~~~ke~---Gi-~v~i~R----T~gVSTSdII~RI~~ 231 (413)
+...-.+.|++. |+ ++.++. ...+|||.|.+.|..
T Consensus 131 ~r~g~~~~L~~~~~~g~~V~~v~~~~~~~~~ISST~IR~~L~~ 173 (338)
T 2x0k_A 131 NAAGTADSLRQICQSRLTVDVIDLLDDEGVRISSTTVREFLSE 173 (338)
T ss_dssp GGCEEHHHHHHHTTTTSEEEEECCCEETTEECSHHHHHHHHHT
T ss_pred CCCCCHHHHHHHhcCCeEEEEECcEecCCcccccchHHHHHhc
Confidence 332234445443 55 445555 457999999988865
No 41
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=98.95 E-value=6.2e-10 Score=98.93 Aligned_cols=58 Identities=21% Similarity=0.311 Sum_probs=51.5
Q ss_pred EEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 263 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 263 iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
+|++.|+||.+|.||+.++++|.+++ -|+|+||+++|....+. .+|+.+.++|++|++
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~~-~d~viv~v~~~~~~~k~-~~~~~~~~~R~~ml~ 59 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKLG-GRDITIGVTSDRMARAR-IRSVLPFAIRAENVK 59 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHHH-TTCEEEEEECHHHHHHH-SCCCSCHHHHHHHHH
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHhC-CCEEEEEECCCcccccc-CCCCCCHHHHHHHHH
Confidence 57889999999999999999999983 38999999999987433 578999999999987
No 42
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.93 E-value=2e-09 Score=104.28 Aligned_cols=64 Identities=20% Similarity=0.143 Sum_probs=52.4
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-cccc
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRYV 114 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~V 114 (413)
.|+++++.|+|||+|.||+.++++|++.+ |.|+|+|.++..-. +++..++.++|++|++. +...
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~--d~v~v~v~~~~~p~--~~~~~~~~~~R~~m~~~~~~~~ 70 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIIILGSHRVAA--DTRNPWRSPERMAMIEACLSPQ 70 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEEEEEETCCC--CSSSCSCHHHHHHHHHTTSCHH
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhC--CeEEEEECCcccCC--CCCCCCCHHHHHHHHHHHhhhc
Confidence 35789999999999999999999999997 78999888885322 33445899999999995 4544
No 43
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=98.89 E-value=4.4e-09 Score=95.90 Aligned_cols=110 Identities=10% Similarity=-0.013 Sum_probs=71.4
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC-CCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDEKKFRFQNKIEEFKDRSKRVMENIG 339 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg-~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~ 339 (413)
++++++.|+||.+|.||+.++++|++.++.|.++++++.+.. .|. .++.+.++|++|++. +++.++.+..
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~---~k~~~~~~~~~~R~~ml~~------a~~~~~~v~v 77 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPP---HKQNEDYTDSFHRVEMLKL------AIQSNPSFKL 77 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEEEECCCC------------CHHHHHHHHHH------HHTTCTTEEE
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEEEECCCCC---CcCCcCCCCHHHHHHHHHH------HHcCCCCeEE
Confidence 478899999999999999999999999755899999998763 343 578999999999872 3444443322
Q ss_pred cc----------hhhhhHhHHhhchhhhccceeeeecCCCcc-chhhhhHHHh
Q psy5600 340 ER----------RVDMIQKWEEKSRDIIDTFLLLFGREGRLK-HMWNEGKGKF 381 (413)
Q Consensus 340 ~~----------~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~-~~~~~~k~~~ 381 (413)
.. +.|.+..+...-|+. .+.++.|.|+..+ +.|...++-+
T Consensus 78 ~~~e~~~~~~~~t~~~l~~l~~~~p~~--~~~~v~G~D~~~~~~~W~~~e~i~ 128 (194)
T 1kam_A 78 ELVEMEREGPSYTFDTVSLLKQRYPND--QLFFIIGADMIEYLPKWYKLDELL 128 (194)
T ss_dssp CCGGGSTTCCCSHHHHHHHHHHHSTTS--EEEEEEETTTTTTCCCCHHHHHHH
T ss_pred eHHHhcCCCCCChHHHHHHHHHHCCCC--cEEEEEecchhhhhccccCHHHHH
Confidence 11 223333333333441 3458899998655 6777775433
No 44
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=98.89 E-value=1.9e-09 Score=95.94 Aligned_cols=93 Identities=16% Similarity=0.216 Sum_probs=67.5
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
++++++.|+||.+|.||+.++++|++.+ |.|+|.+..+. .| +++++.++|++|++. +++.++.+...
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~--d~v~v~~~~~p----~k-~~l~~~~~R~~ml~~------a~~~~~~v~v~ 68 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVCVLNNS----SK-KPLFSVEERCELLRE------VTKDIPNITVE 68 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEECCCC----SS-CCSSCHHHHHHHHHH------HHTTCTTEEEE
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC--CEEEEEECCCC----cc-CCCCCHHHHHHHHHH------HHhcCCCEEEc
Confidence 4688999999999999999999999995 89999888652 23 578999999999882 34444443332
Q ss_pred chhhh-hHhHHhhchhhhccceeeeecCCCcc
Q psy5600 341 RRVDM-IQKWEEKSRDIIDTFLLLFGREGRLK 371 (413)
Q Consensus 341 ~~~d~-~~~~e~~~~Dii~~f~~~~G~Dw~~~ 371 (413)
...++ .+.+++++++. ++.|.|+..+
T Consensus 69 ~~e~~~~~~l~~l~~~~-----~i~G~d~~~~ 95 (169)
T 1o6b_A 69 TSQGLLIDYARRKNAKA-----ILRGLRAVSD 95 (169)
T ss_dssp ECSSCHHHHHHHTTCSE-----EEEEECSGGG
T ss_pred ccchHHHHHHHHcCCCE-----EEEcCccccc
Confidence 22122 34456666665 7889997665
No 45
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.87 E-value=1.6e-09 Score=105.72 Aligned_cols=61 Identities=16% Similarity=0.118 Sum_probs=52.1
Q ss_pred CeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-cc
Q psy5600 48 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CR 112 (413)
Q Consensus 48 ~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r 112 (413)
|+++++.|+|||+|.||+.++++|+++| |.|+|+|.++..-. ++++.++.++|++||+. ++
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~~~~~v~~~~~~~--~~~~~~~~~~R~~m~~~~~~ 68 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIINIGSCFNTP--NIKNPFSFEQRKQMIESDLQ 68 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEEEEEESCCC--CSSSCSCHHHHHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhC--CcEEEEECCCCCCc--ccCCCCCHHHHHHHHHHHhc
Confidence 4789999999999999999999999997 79999999985322 33567999999999994 54
No 46
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=98.80 E-value=6.3e-09 Score=91.35 Aligned_cols=91 Identities=13% Similarity=0.199 Sum_probs=63.5
Q ss_pred EEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC-CCCCCHHHHHHHHhhHHHHHhhhhhHHHHhccch
Q psy5600 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDEKKFRFQNKIEEFKDRSKRVMENIGERR 342 (413)
Q Consensus 264 V~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg-~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~~~ 342 (413)
+++.|+||.+|.||+.++++|++.+ |.++|+++.+.. |+ .++++.++|++|++. ++..++.+.....
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~~~~~p~----k~~~~~~~~~~R~~ml~~------a~~~~~~v~v~~~ 70 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLF--EKVTVAVLENPS----KRGQYLFSAEERLAIIRE------ATAHLANVEAATF 70 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEEECC---------CCSSCHHHHHHHHHH------HTTTCTTEEEEEE
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHC--CEEEEEEcCCCC----CCCCCCCCHHHHHHHHHH------HhcCCCCEEEEec
Confidence 7889999999999999999999995 889999986642 33 478999999999872 3444443333322
Q ss_pred hhh-hHhHHhhchhhhccceeeeecCCCcc
Q psy5600 343 VDM-IQKWEEKSRDIIDTFLLLFGREGRLK 371 (413)
Q Consensus 343 ~d~-~~~~e~~~~Dii~~f~~~~G~Dw~~~ 371 (413)
.++ .+.+++++.+. ++.|.|..+.
T Consensus 71 e~~~~~~l~~l~~~~-----~v~G~d~~~~ 95 (160)
T 1od6_A 71 SGLLVDFVRRVGAQA-----IVKGLRAVSD 95 (160)
T ss_dssp CSCHHHHHHHTTCSE-----EEEEECTTSC
T ss_pred CchHHHHHHHcCCCE-----EEEeCCcccc
Confidence 222 34556666665 7789885443
No 47
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=98.78 E-value=2.4e-09 Score=105.06 Aligned_cols=92 Identities=15% Similarity=0.195 Sum_probs=63.1
Q ss_pred EEEccccccCChhHHHHHHHHHhcCCCcE---EEEEEcchh---hhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHH
Q psy5600 264 VYADGIYDMFHQGHSRQLMQAKNVFPNVY---LIVGVCSDA---LTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMEN 337 (413)
Q Consensus 264 V~~~G~FDl~H~GHi~~L~~Ak~l~~gd~---LIVGV~sD~---~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~v 337 (413)
|+|.|+||.+|.||.++|++|+++ ++. ..|.++.|. ..+..+.+|++++++|+++++ ++. ++.+
T Consensus 2 vvtiG~FDgvH~GH~~ll~~a~~~--a~~~~~~~vVvtFdphP~~l~~~~~~~l~~~~eR~~ll~-------~lg-~~~v 71 (293)
T 1mrz_A 2 VVSIGVFDGVHIGHQKVLRTMKEI--AFFRKDDSLIYTISYPPEYFLPDFPGLLMTVESRVEMLS-------RYA-RTVV 71 (293)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHH--HHHHTCCCEEEEESSCGGGGSTTCCCBSSCHHHHHHHHT-------TTS-CEEE
T ss_pred EEEEeeCccccHHHHHHHHHHHHH--HHHcCCeEEEEEecCCHHHhCCCCCCCCCCHHHHHHHHH-------hCC-CEEE
Confidence 678999999999999999999988 444 235555563 332222357999999999998 433 2222
Q ss_pred hc------cchhhhhHhHHhhchhhhccceeeeecCCCcc
Q psy5600 338 IG------ERRVDMIQKWEEKSRDIIDTFLLLFGREGRLK 371 (413)
Q Consensus 338 v~------~~~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~ 371 (413)
++ ....++++.+. ++++. ++.|.||+.+
T Consensus 72 ~~F~~~a~ls~~~Fi~~il-l~~~~-----iVvG~Df~fG 105 (293)
T 1mrz_A 72 LDFFRIKDLTPEGFVERYL-SGVSA-----VVVGRDFRFG 105 (293)
T ss_dssp ECHHHHTTCCHHHHHHHHC-TTCCE-----EEEETTCCBS
T ss_pred EEhHHhhcCCHHHHHHHHh-cCCCE-----EEECCCCCCC
Confidence 22 12334555444 67776 9999999865
No 48
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=98.78 E-value=5.3e-09 Score=94.26 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=72.5
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC-CCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDEKKFRFQNKIEEFKDRSKRVMENIG 339 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg-~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~ 339 (413)
++++++.|+||.+|.||+.++++|++.++.|.+++.++++... |+ .++.+.++|++|++. +++.++.+..
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~~~~~~~~~---k~~~~~~~~~~R~~ml~~------~~~~~~~v~v 72 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPH---KQGRNITSVESRLQMLEL------ATEAEEHFSI 72 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEEEECSSCTT---CTTSCCCCHHHHHHHHHH------HHTTCTTEEE
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEEEECCCCCC---ccCCCCCCHHHHHHHHHH------HhCCCCCEEE
Confidence 4688999999999999999999999996559999999987633 43 468999999999982 3334443332
Q ss_pred cc----------hhhhhHhHHhhchhhhccceeeeecCCCcc-chhhhhH
Q psy5600 340 ER----------RVDMIQKWEEKSRDIIDTFLLLFGREGRLK-HMWNEGK 378 (413)
Q Consensus 340 ~~----------~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~-~~~~~~k 378 (413)
.. ..+.+..+...-|+. .|.++.|.|+..+ ..|...+
T Consensus 73 ~~~e~~~~~~~~~~~~l~~l~~~~p~~--~~~~v~G~D~~~~~~~w~~~~ 120 (189)
T 2qtr_A 73 CLEELSRKGPSYTYDTMLQLTKKYPDV--QFHFIIGGDMVEYLPKWYNIE 120 (189)
T ss_dssp CCTGGGSCSCCCHHHHHHHHHHHCTTC--EEEEEEEHHHHHHGGGSTTHH
T ss_pred ehHHhcCCCCCCHHHHHHHHHHHCCCC--CEEEEEehhhhhhhhccCCHH
Confidence 21 123333343333442 4557899887644 4465554
No 49
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.77 E-value=1.5e-08 Score=100.34 Aligned_cols=136 Identities=18% Similarity=0.134 Sum_probs=91.0
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhhcCCCC-EEEEEEecCcc----ccc---CCCCCCCCHHHHHHHHHhccccCceeec
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKNVFPNV-YLIVGVCSDAL----THR---KKGRTVMNDIERYEAVRHCRYVDEVVRD 120 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd-~LIVGV~sDe~----v~~---~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ 120 (413)
..|++-|+||.+|.||..+|++|++++..- .-.|.++-|.- ... .+.+++++.+||+++++++. ||.+++.
T Consensus 21 ~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~lG-VD~v~~~ 99 (308)
T 3op1_A 21 DSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKREG-VEELYLL 99 (308)
T ss_dssp CEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHHT-CCEEEEE
T ss_pred CeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHcC-CCEEEEe
Confidence 469999999999999999999999885211 12444555531 221 11247999999999999998 9999875
Q ss_pred CCCC------ChHHHHHHhccCCCcccccCCCCCCCChhHHHhhhccccccccccccccccCCCccceeeeeecCCCCcc
Q psy5600 121 APWE------TDDEFLAKHKESTSSISITKPAPFSDEPEAVEERNQCNYEQRITYDDAKQGKGKAWERIDFIAHDDIPYM 194 (413)
Q Consensus 121 ap~~------l~~dfi~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kg~~~~~~~~~~~~~~~~~ 194 (413)
||+ ...+|++++- + +. +++.++.|+|+..
T Consensus 100 -~F~~~~a~ls~e~Fv~~ll----------------------~--~l--------------------~~~~ivvG~DfrF 134 (308)
T 3op1_A 100 -DFSSQFASLTAQEFFATYI----------------------K--AM--------------------NAKIIVAGFDYTF 134 (308)
T ss_dssp -CCCHHHHTCCHHHHHHHHH----------------------H--HH--------------------TEEEEEEETTCCB
T ss_pred -cCCHHHHcCCHHHHHHHHH----------------------H--Hc--------------------CCCEEEECcCCCC
Confidence 453 3456665321 0 00 0667778888754
Q ss_pred CccccchHHHHHhCCe--EEEcCC----CCCCCHHHHHHHHHh
Q psy5600 195 SEFGTDVYAHLKARGM--FVATQR----TEGVSTSDIVARIVR 231 (413)
Q Consensus 195 ~~~~~d~y~~~ke~Gi--~v~i~R----T~gVSTSdII~RI~~ 231 (413)
.. ...-.+.|++.|. +..++. ...+|||.|.+-|..
T Consensus 135 G~-r~G~~~~L~~~~~~~V~~v~~~~~~~~~ISST~IR~~L~~ 176 (308)
T 3op1_A 135 GS-DKKTAEDLKNYFDGEVIIVPPVEDEKGKISSTRIRQAILD 176 (308)
T ss_dssp TT-TTBCSTTHHHHCSSEEEEECCCBCSSCBCCHHHHHHHHHH
T ss_pred CC-cCCCHHHHHHhCCCCEEEeCCEecCCceEeHHHHHHHHHc
Confidence 43 3333456777764 445543 467999999998865
No 50
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=98.72 E-value=1.6e-08 Score=91.81 Aligned_cols=110 Identities=11% Similarity=0.063 Sum_probs=74.3
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC-CCCCCHHHHHHHHhhHHHHHhhhhhHHHHhc
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG-RTVMNDEKKFRFQNKIEEFKDRSKRVMENIG 339 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg-~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~ 339 (413)
++++.+.|+||.+|.||+.++++|+++++.|.+++..+.+... |+ .++.+.++|++|++. +++....+..
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~~~~~~~~~---k~~~~~~~~~~R~~m~~~------a~~~~~~v~v 72 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPL---KKHHDFIDVQHRLTMIQM------IIDELGFGDI 72 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEECSBCTT---SCCCSSCCCHHHHHHHHH------HHHHHTCCEE
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEEEEECCCCCC---CcCCCCCCHHHHHHHHHH------HHcCCCCEEE
Confidence 4688899999999999999999999987558999888887643 43 578899999999972 2332222111
Q ss_pred c----------chhhhhHhHHhhchhhhccceeeeecCCCcc-chhhhhHHHh
Q psy5600 340 E----------RRVDMIQKWEEKSRDIIDTFLLLFGREGRLK-HMWNEGKGKF 381 (413)
Q Consensus 340 ~----------~~~d~~~~~e~~~~Dii~~f~~~~G~Dw~~~-~~~~~~k~~~ 381 (413)
. .+.|.+..+.+.-|+. .+.++.|.|+-.. +.|...++.+
T Consensus 73 ~~~e~~~~~~syt~dtl~~l~~~~p~~--~~~~i~G~D~~~~~~~W~~~~~i~ 123 (189)
T 2h29_A 73 CDDEIKRGGQSYTYDTIKAFKEQHKDS--ELYFVIGTDQYNQLEKWYQIEYLK 123 (189)
T ss_dssp CCHHHHHCSBCCHHHHHHHHHHHSTTE--EEEEEEEHHHHTTGGGSTTHHHHH
T ss_pred ehHHhcCCCCCCHHHHHHHHHHHCCCC--cEEEEEecchhhhhccccCHHHHH
Confidence 1 2345555555555552 3458899885333 5566654433
No 51
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=98.72 E-value=1.8e-08 Score=96.09 Aligned_cols=88 Identities=16% Similarity=0.213 Sum_probs=61.7
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCC--EEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeecC--
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNV--YLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRDA-- 121 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd--~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~a-- 121 (413)
.++++++.|+|||+|.||+.++++|++.++.+ +.+||+.-...-...+++++++.++|++|++ ++...+.+.+..
T Consensus 5 ~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~~E 84 (252)
T 1nup_A 5 IPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDPWE 84 (252)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECCHH
T ss_pred CceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeehHH
Confidence 36789999999999999999999999887322 3666533322222233457899999999999 577766665532
Q ss_pred ----CCCChHHHHHHhc
Q psy5600 122 ----PWETDDEFLAKHK 134 (413)
Q Consensus 122 ----p~~l~~dfi~~~~ 134 (413)
.+..|.+-|+.++
T Consensus 85 ~~~~~~syTidtL~~l~ 101 (252)
T 1nup_A 85 SEQAQWMETVKVLRHHH 101 (252)
T ss_dssp HHSSSCCCHHHHHHHHH
T ss_pred hcCCCCCCHHHHHHHHH
Confidence 3456666666553
No 52
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=98.71 E-value=2.6e-08 Score=90.79 Aligned_cols=112 Identities=9% Similarity=0.100 Sum_probs=70.3
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhh-HHHHH-hhhhhHH--H
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNK-IEEFK-DRSKRVM--E 336 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~-i~~v~-e~~k~Vd--~ 336 (413)
++|++..|+||.+|.||+.+++ |.+.+ |+|+++++.+. .. +++..+.++|++|++. ++... ..+. |+ |
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~--d~v~~~p~~~~---~~-k~~~~~~~~R~~m~~~a~~~~~~~~~~-v~~~E 73 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF--DLVLLEPSIAH---AW-GKNMLDYPIRCKLVDAFIKDMGLSNVQ-RSDLE 73 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS--SEEEEEECC-----------CCCHHHHHHHHHHHHHHHCCTTEE-ECCHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC--CEEEEEECCCC---CC-CCCCCCHHHHHHHHHHHHhcCCCCcEE-EEehh
Confidence 5789999999999999999998 77664 89999999872 22 2478999999999973 11110 0011 10 1
Q ss_pred Hh------ccchhhhhHhHHhhchhhhccceeeeecC-CCccchhhhhHHHhh
Q psy5600 337 NI------GERRVDMIQKWEEKSRDIIDTFLLLFGRE-GRLKHMWNEGKGKFL 382 (413)
Q Consensus 337 vv------~~~~~d~~~~~e~~~~Dii~~f~~~~G~D-w~~~~~~~~~k~~~~ 382 (413)
.- +..+.|-+..+.+.-|+. .|.+++|.| |..-+.|...++-+.
T Consensus 74 ~~l~~~~~~syT~dTl~~l~~~~p~~--~~~~iiG~D~l~~l~~W~~~~~l~~ 124 (177)
T 3h05_A 74 QALYQPGQSVTTYALLEKIQEIYPTA--DITFVIGPDNFFKFAKFYKAEEITE 124 (177)
T ss_dssp HHHC----CCCHHHHHHHHHHHSTTS--EEEEEECHHHHHTGGGSTTHHHHHH
T ss_pred hhcccCCCCcchHHHHHHHHHHhcCC--CeEEEEecchhhhcccchhHHHHHH
Confidence 11 224455566666655654 456788888 444466666655443
No 53
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=98.70 E-value=1.4e-08 Score=94.04 Aligned_cols=106 Identities=12% Similarity=0.202 Sum_probs=71.4
Q ss_pred eE-EEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHhhHHHHHhhhhhHHHHhcc
Q psy5600 262 VR-VYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQNKIEEFKDRSKRVMENIGE 340 (413)
Q Consensus 262 ~i-V~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~~i~~v~e~~k~Vd~vv~~ 340 (413)
+| +++.|+||.+|.||+.++++|+++++-|.+++.++.+... |..++.+.++|++|++. +++.++.+...
T Consensus 3 ~i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~~~~~~~~~---k~~~~~~~~~R~~ml~~------a~~~~~~v~v~ 73 (213)
T 1k4m_A 3 SLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPH---RPQPEANSVQRKHMLEL------AIADKPLFTLD 73 (213)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEEEECSSCTT---SCCCSSCHHHHHHHHHH------HHTTCTTEEEC
T ss_pred eEEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEEEECCCCCC---CCCCCCCHHHHHHHHHH------HhccCCCEEEe
Confidence 36 8899999999999999999999986458999999887543 44478999999999872 33343333222
Q ss_pred ----------chhhhhHhHHhh-chhhhccceeeeecCCCcc-chhhhhH
Q psy5600 341 ----------RRVDMIQKWEEK-SRDIIDTFLLLFGREGRLK-HMWNEGK 378 (413)
Q Consensus 341 ----------~~~d~~~~~e~~-~~Dii~~f~~~~G~Dw~~~-~~~~~~k 378 (413)
-+.|.+..+.+. .++. .|.++.|.|.... +.|...+
T Consensus 74 ~~e~~~~~~s~t~~~l~~l~~~~~~~~--~~~~i~G~D~~~~l~~W~~~~ 121 (213)
T 1k4m_A 74 ERELKRNAPSYTAQTLKEWRQEQGPDV--PLAFIIGQDSLLTFPTWYEYE 121 (213)
T ss_dssp CHHHHCSSCCCHHHHHHHHHHHHCTTS--CEEEEEEHHHHHHGGGSTTHH
T ss_pred HHHhcCCCCCcHHHHHHHHHHHhCCCC--cEEEEEehhhhhhhhccCCHH
Confidence 123444444333 5552 3448889875432 3455554
No 54
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=98.66 E-value=3.4e-08 Score=93.95 Aligned_cols=60 Identities=15% Similarity=0.158 Sum_probs=52.0
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
.++++++.|+||.+|.||+.++++|+++++-|.|+|+++.+... |+.+..+.++|++|++
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v~~~~~~p~---K~~~~~~~~~R~~ml~ 81 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPH---RETPQVSAAQRLAMVE 81 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEEEECCCCGG---GSCTTCCHHHHHHHHH
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEEEEcCCCCC---CCCCCCCHHHHHHHHH
Confidence 46789999999999999999999999986459999999998622 4457899999999997
No 55
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=98.64 E-value=4.2e-08 Score=95.37 Aligned_cols=88 Identities=18% Similarity=0.223 Sum_probs=62.6
Q ss_pred CCCeEEEEcCccCCCChHHHHHHHHHhhcCCCC---EEEEEEecCcccccCCCCCCCCHHHHHHHHH-hccccCceeec-
Q psy5600 46 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNV---YLIVGVCSDALTHRKKGRTVMNDIERYEAVR-HCRYVDEVVRD- 120 (413)
Q Consensus 46 ~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd---~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~-a~r~VDeVvi~- 120 (413)
..++++++.|+|||+|.||+.++++|++.++.+ .++|++..-.... .++.++++.++|++|++ ++..++.+.+.
T Consensus 6 ~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~-~~K~~l~s~~~R~~ml~~ai~~~~~~~v~~ 84 (279)
T 1kqn_A 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDA-YKKKGLIPAYHRVIMAELATKNSKWVEVDT 84 (279)
T ss_dssp CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGG-GCCTTCCCHHHHHHHHHHHTTTCSSEEECC
T ss_pred CCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCC-ccccCCCCHHHHHHHHHHHhcCCCcEEEec
Confidence 346789999999999999999999999876323 3666543221111 22357899999999999 56788877764
Q ss_pred -----CCCCChHHHHHHhc
Q psy5600 121 -----APWETDDEFLAKHK 134 (413)
Q Consensus 121 -----ap~~l~~dfi~~~~ 134 (413)
..|..|.+-|+.++
T Consensus 85 ~E~~~~~~syTidtL~~l~ 103 (279)
T 1kqn_A 85 WESLQKEWKETLKVLRHHQ 103 (279)
T ss_dssp TGGGCSSCCCHHHHHHHHH
T ss_pred cccccCCCCcHHHHHHHHH
Confidence 23556766666654
No 56
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=98.55 E-value=8.8e-08 Score=94.78 Aligned_cols=60 Identities=23% Similarity=0.250 Sum_probs=50.5
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhh----h-cCCCCCCCHHHHHHHHh
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTH----R-KKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~----~-~Kg~Pi~~~~eR~~~v~ 322 (413)
++++++.|+||.+|.||+.++++|+++| |+|+|+++++..-. + .+.++.++.++|++|++
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~ 66 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVIVCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQ 66 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEEEEECHHHHHHHHHHTTCSSCCCHHHHHHHHH
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEEECCCCccccccccccccCCCCCHHHHHHHHH
Confidence 5688999999999999999999999995 99999999998641 2 22243499999999987
No 57
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=98.45 E-value=2.3e-07 Score=83.83 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=47.5
Q ss_pred eEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 262 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 262 ~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
+++++.|+||.+|.||+.++++|+++ .|.++|++.+...- +|+.+.++.++|+++++
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~--~d~v~v~v~~~~~p--~~~~~~~~~~~R~~~~~ 60 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEE--VDELIICIGSAQLS--HSIRDPFTAGERVMMLT 60 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTT--CSEEEEEECSTTCC--SSSSSCSCHHHHHHHHH
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHh--CCeeEEEECCCCCC--cCCCCCCCHHHHHHHHH
Confidence 57899999999999999999999999 58999999555432 23355779999999987
No 58
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.42 E-value=2.5e-07 Score=90.46 Aligned_cols=70 Identities=13% Similarity=0.153 Sum_probs=56.0
Q ss_pred CCCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEE--ecCcccccCC-CCCCCCHHHHHHHHHhccccCceee
Q psy5600 46 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGV--CSDALTHRKK-GRTVMNDIERYEAVRHCRYVDEVVR 119 (413)
Q Consensus 46 ~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV--~sDe~v~~~K-g~Pv~~~eER~~~V~a~r~VDeVvi 119 (413)
.+++++++ |+||.+|.||..+|++|++.+ |.++|++ ++.++..... .+...+.++|+++++++. ||.|+.
T Consensus 20 ~g~~V~~v-gtfdgLH~GH~sLI~~A~~~a--d~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~G-VD~vf~ 92 (280)
T 2ejc_A 20 KKKTIGFV-PTMGYLHEGHLSLVRRARAEN--DVVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKEN-VDCIFH 92 (280)
T ss_dssp TTCCEEEE-EECSCCCHHHHHHHHHHHHHS--SEEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTTT-CSEEEC
T ss_pred cCCEEEEE-cCCccccHHHHHHHHHHHHhC--CEEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHCC-CCEEEe
Confidence 45667777 899999999999999999995 7999999 4444443221 123678999999999998 999986
No 59
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=98.42 E-value=3.1e-07 Score=81.97 Aligned_cols=56 Identities=16% Similarity=0.256 Sum_probs=45.4
Q ss_pred EEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 263 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 263 iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
++++.|+||.+|.||+.++++|+++ .|.|+|++.+... -.|..+.++.++|++|++
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~--~d~v~v~v~~~~~--p~~~~~~~~~~~R~~m~~ 57 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEE--VDEIIIGIGSAQK--SHTLENPFTAGERILMIT 57 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTT--CSEEEEEECSTTC--CSSSSCCSCHHHHHHHHH
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHh--CCeEEEEEcCCCC--CCCCCCCCCHHHHHHHHH
Confidence 6788999999999999999999999 5899999844332 223334569999999987
No 60
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=98.41 E-value=1.6e-07 Score=90.99 Aligned_cols=59 Identities=19% Similarity=0.177 Sum_probs=49.6
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
.++++++.|+||.+|.||+.++++|++.+ |.++|+|.++..-. +.+..++.++|++|++
T Consensus 6 ~~~~~i~~G~FdP~H~GH~~li~~a~~~~--d~v~v~v~~~~~p~--~~~~~~~~~~R~~m~~ 64 (341)
T 2qjo_A 6 KYQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIIILGSHRVAA--DTRNPWRSPERMAMIE 64 (341)
T ss_dssp SEEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEEEEEETCCC--CSSSCSCHHHHHHHHH
T ss_pred eeeEEEEEEEeCCCCHHHHHHHHHHHHhC--CeEEEEECCcccCC--CCCCCCCHHHHHHHHH
Confidence 46789999999999999999999999995 89999999986432 2233479999999987
No 61
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=98.39 E-value=2.6e-07 Score=90.17 Aligned_cols=58 Identities=17% Similarity=0.128 Sum_probs=50.0
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
+++++..|+||.+|.||+.++++|.++| |.|+|+|.++..-. +.++.++.++|++|++
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~~~~~v~~~~~~~--~~~~~~~~~~R~~m~~ 64 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIINIGSCFNTP--NIKNPFSFEQRKQMIE 64 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEEEEEESCCC--CSSSCSCHHHHHHHHH
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhC--CcEEEEECCCCCCc--ccCCCCCHHHHHHHHH
Confidence 5788999999999999999999999994 89999999987432 2345689999999997
No 62
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=98.36 E-value=2e-07 Score=93.16 Aligned_cols=98 Identities=9% Similarity=0.065 Sum_probs=66.5
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCC-cEEEEEEcchhhhhh----cC-CCCCCCHHHHHHHHhhHHHHHhhhhhH
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPN-VYLIVGVCSDALTHR----KK-GRTVMNDEKKFRFQNKIEEFKDRSKRV 334 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~g-d~LIVGV~sD~~v~~----~K-g~Pi~~~~eR~~~v~~i~~v~e~~k~V 334 (413)
..+|.+-|+||.+|.||..+|++|++.++. +-..|+++.|..-.. .+ .+++++.++|+++++ ++. |
T Consensus 15 ~~~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~-------~~g-V 86 (338)
T 2x0k_A 15 DNSAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAE-------SFG-I 86 (338)
T ss_dssp CCEEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHH-------HTT-C
T ss_pred CCeEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHH-------hcC-C
Confidence 357899999999999999999999987411 124788888874322 22 246899999999998 443 6
Q ss_pred HHHhccch---------hhhhHh--HHhhchhhhccceeeeecCCCcc
Q psy5600 335 MENIGERR---------VDMIQK--WEEKSRDIIDTFLLLFGREGRLK 371 (413)
Q Consensus 335 d~vv~~~~---------~d~~~~--~e~~~~Dii~~f~~~~G~Dw~~~ 371 (413)
|.++.... .++++. ++.++.+. ++.|.||+.+
T Consensus 87 D~v~v~~F~~~~a~ls~e~Fi~~il~~~l~~~~-----ivvG~Df~FG 129 (338)
T 2x0k_A 87 DGVLVIDFTRELSGTSPEKYVEFLLEDTLHASH-----VVVGANFTFG 129 (338)
T ss_dssp SEEEEECTTTSSSSCCHHHHHHHCCCCCTCEEE-----EEEETTCEES
T ss_pred CEEEEccccHHHHhCCHHHHHHHHHHhhcCCCE-----EEEeecCCCC
Confidence 66554221 223332 23344444 8999999854
No 63
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.32 E-value=4.5e-07 Score=89.67 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=66.6
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcCCCc-EEEEEEcchhh----hhh--cCC-CCCCCHHHHHHHHhhHHHHHhhhh
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVFPNV-YLIVGVCSDAL----THR--KKG-RTVMNDEKKFRFQNKIEEFKDRSK 332 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd-~LIVGV~sD~~----v~~--~Kg-~Pi~~~~eR~~~v~~i~~v~e~~k 332 (413)
...|++-|+||-+|.||..+|++|++++... .-.|.++-|.. ... .+. +++++.++|+++++ ++.
T Consensus 20 ~~~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~-------~lG 92 (308)
T 3op1_A 20 SDSVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLK-------REG 92 (308)
T ss_dssp SCEEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHH-------HHT
T ss_pred CCeEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHH-------HcC
Confidence 4579999999999999999999999885211 12455555642 222 112 46999999999998 544
Q ss_pred hHHHHhccc---------hhhhhH-hHHhhchhhhccceeeeecCCCccc
Q psy5600 333 RVMENIGER---------RVDMIQ-KWEEKSRDIIDTFLLLFGREGRLKH 372 (413)
Q Consensus 333 ~Vd~vv~~~---------~~d~~~-~~e~~~~Dii~~f~~~~G~Dw~~~~ 372 (413)
||.++... ..++++ .+.+++... ++.|+||+.+.
T Consensus 93 -VD~v~~~~F~~~~a~ls~e~Fv~~ll~~l~~~~-----ivvG~DfrFG~ 136 (308)
T 3op1_A 93 -VEELYLLDFSSQFASLTAQEFFATYIKAMNAKI-----IVAGFDYTFGS 136 (308)
T ss_dssp -CCEEEEECCCHHHHTCCHHHHHHHHHHHHTEEE-----EEEETTCCBTT
T ss_pred -CCEEEEecCCHHHHcCCHHHHHHHHHHHcCCCE-----EEECcCCCCCC
Confidence 66665432 233443 244455555 89999998764
No 64
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=98.27 E-value=5.2e-07 Score=88.23 Aligned_cols=70 Identities=13% Similarity=0.163 Sum_probs=55.3
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEE--cchhhhhhcC--CCCCCCHHHHHHHHhhHHHHHhhhhhHH
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGV--CSDALTHRKK--GRTVMNDEKKFRFQNKIEEFKDRSKRVM 335 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV--~sD~~v~~~K--g~Pi~~~~eR~~~v~~i~~v~e~~k~Vd 335 (413)
+++++++ |+||.+|.||+.+|++|++. +|.+||++ |++++..... .+ ..+.++|+++++ ++. ||
T Consensus 21 g~~V~~v-gtfdgLH~GH~sLI~~A~~~--ad~vVVSffvnP~qf~~~ed~~~y-p~tle~d~~lL~-------~~G-VD 88 (280)
T 2ejc_A 21 KKTIGFV-PTMGYLHEGHLSLVRRARAE--NDVVVVSIFVNPTQFGPNEDYERY-PRDFERDRKLLE-------KEN-VD 88 (280)
T ss_dssp TCCEEEE-EECSCCCHHHHHHHHHHHHH--SSEEEEEECCCGGGCCTTSCGGGS-CCCHHHHHHHHH-------TTT-CS
T ss_pred CCEEEEE-cCCccccHHHHHHHHHHHHh--CCEEEEEEeCChHHhcCCcccccC-CCCHHHHHHHHH-------HCC-CC
Confidence 5678888 99999999999999999999 58999999 7777765422 23 457899999998 555 77
Q ss_pred HHhccc
Q psy5600 336 ENIGER 341 (413)
Q Consensus 336 ~vv~~~ 341 (413)
.++.-.
T Consensus 89 ~vf~p~ 94 (280)
T 2ejc_A 89 CIFHPS 94 (280)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 666543
No 65
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=98.22 E-value=1e-05 Score=81.45 Aligned_cols=80 Identities=21% Similarity=0.235 Sum_probs=60.6
Q ss_pred CCCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcc--cccCCCCCCCCHHHHHHHHHhccccCceeecCCC
Q psy5600 46 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDAL--THRKKGRTVMNDIERYEAVRHCRYVDEVVRDAPW 123 (413)
Q Consensus 46 ~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~--v~~~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~ 123 (413)
..++.|.+=|.||+||.||..+|++|++ . + ++++|.+-.. +.+ ..+.+++.++|+++++.+ .||.|+.. |+
T Consensus 50 ~~~~~v~~lG~FDg~H~GHq~lI~~a~~-~--~-~~~~Vms~~~~~vqr-g~~~l~~~~~R~~~~~~~-GvD~viel-pF 122 (357)
T 3gmi_A 50 NKDKIVCDFTEYNPLHKGHKYALEKGKE-H--G-IFISVLPGPLERSGR-GIPYFLNRYIRAEMAIRA-GADIVVEG-PP 122 (357)
T ss_dssp TCCCEEEEECCCTTCCHHHHHHHHHHHT-S--S-EEEEEECCTTSBCTT-SSBCSSCHHHHHHHHHHH-TCSEEEEC-CC
T ss_pred CCCCEEEEEEecCccCHHHHHHHHHHHH-c--C-CeEEEEcCchHHhcC-CCCcCCCHHHHHHHHHHC-CCCEEEEc-Cc
Confidence 4567899999999999999999999999 3 3 6666666433 431 224699999999999987 79998875 44
Q ss_pred C---ChHHHHHH
Q psy5600 124 E---TDDEFLAK 132 (413)
Q Consensus 124 ~---l~~dfi~~ 132 (413)
. ...+|++.
T Consensus 123 ~~~~s~~~Fv~~ 134 (357)
T 3gmi_A 123 MGIMGSGQYMRC 134 (357)
T ss_dssp GGGSCHHHHHHH
T ss_pred hhhCCHHHHHHH
Confidence 2 44677764
No 66
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=97.98 E-value=3.2e-06 Score=80.55 Aligned_cols=63 Identities=11% Similarity=0.177 Sum_probs=47.0
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCc--EEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNV--YLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd--~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
.++++++.|+||.+|.||+.++++|.+.++.| ..|||+.-.......++.++.+.++|++|++
T Consensus 5 ~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~ 69 (252)
T 1nup_A 5 IPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMAR 69 (252)
T ss_dssp EEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHH
T ss_pred CceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHH
Confidence 46788999999999999999999999876323 3676544333333333346889999999987
No 67
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=97.81 E-value=1e-05 Score=78.50 Aligned_cols=64 Identities=17% Similarity=0.212 Sum_probs=46.6
Q ss_pred eccceEEEEccccccCChhHHHHHHHHHhcCCCc---EEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 258 TSRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNV---YLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 258 ~~~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd---~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
.+.++++++.|+||.+|.||+.++++|++.++.| .++|++..-....-.| .++.+.++|++|++
T Consensus 5 ~~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K-~~l~s~~~R~~ml~ 71 (279)
T 1kqn_A 5 EKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKK-KGLIPAYHRVIMAE 71 (279)
T ss_dssp -CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCC-TTCCCHHHHHHHHH
T ss_pred CCCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccc-cCCCCHHHHHHHHH
Confidence 3456789999999999999999999999876323 3666553222222223 46889999999997
No 68
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=97.11 E-value=0.00094 Score=67.24 Aligned_cols=105 Identities=13% Similarity=0.131 Sum_probs=67.2
Q ss_pred ccceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhh--hhhcCCC-CCCCHHHHHHHHhhHHHHHhhhhhHH
Q psy5600 259 SRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDAL--THRKKGR-TVMNDEKKFRFQNKIEEFKDRSKRVM 335 (413)
Q Consensus 259 ~~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~--v~~~Kg~-Pi~~~~eR~~~v~~i~~v~e~~k~Vd 335 (413)
..+++|.+-|.||-||.||..+|++|++ . + ++++|-|-.. +. +|. .+++.++|.+++. .+ .||
T Consensus 50 ~~~~~v~~lG~FDg~H~GHq~lI~~a~~-~--~-~~~~Vms~~~~~vq--rg~~~l~~~~~R~~~~~-------~~-GvD 115 (357)
T 3gmi_A 50 NKDKIVCDFTEYNPLHKGHKYALEKGKE-H--G-IFISVLPGPLERSG--RGIPYFLNRYIRAEMAI-------RA-GAD 115 (357)
T ss_dssp TCCCEEEEECCCTTCCHHHHHHHHHHHT-S--S-EEEEEECCTTSBCT--TSSBCSSCHHHHHHHHH-------HH-TCS
T ss_pred CCCCEEEEEEecCccCHHHHHHHHHHHH-c--C-CeEEEEcCchHHhc--CCCCcCCCHHHHHHHHH-------HC-CCC
Confidence 4567999999999999999999999999 3 3 5555555333 33 444 4789999999987 22 455
Q ss_pred HHhccch------hhhhH----hHHhhchhhhccceeeeecCCCccchhhhhHHHhhhh
Q psy5600 336 ENIGERR------VDMIQ----KWEEKSRDIIDTFLLLFGREGRLKHMWNEGKGKFLQA 384 (413)
Q Consensus 336 ~vv~~~~------~d~~~----~~e~~~~Dii~~f~~~~G~Dw~~~~~~~~~k~~~~~~ 384 (413)
.++.... .++++ .+..++.+. +++|. .....+.++-..+...
T Consensus 116 ~vielpF~~~~s~~~Fv~~~v~ll~~l~~~~-----iv~G~--~~~~~~~~~~~~i~~~ 167 (357)
T 3gmi_A 116 IVVEGPPMGIMGSGQYMRCLIKMFYSLGAEI-----IPRGY--IPEKTMEKVIDCINKG 167 (357)
T ss_dssp EEEECCCGGGSCHHHHHHHHHHHHHHHTCCE-----EEEEE--CCCHHHHHHHHHHHTT
T ss_pred EEEEcCchhhCCHHHHHHHHHHHHHHcCCCE-----EEECC--CCchhHHHHHHHHhcc
Confidence 5543322 23332 233444444 88998 3344455555555544
No 69
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=96.66 E-value=0.0045 Score=60.33 Aligned_cols=64 Identities=19% Similarity=0.198 Sum_probs=51.9
Q ss_pred EEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCC---CCCCCCHHHHHHHHHhccccCceee
Q psy5600 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKK---GRTVMNDIERYEAVRHCRYVDEVVR 119 (413)
Q Consensus 50 ~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~K---g~Pv~~~eER~~~V~a~r~VDeVvi 119 (413)
.|.+-|. +|.||..++++|++.+ +.++|.+..+..---.+ .+.+.++++|+++++++. ||.|+.
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~a--~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~G-vD~vf~ 87 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARREN--PFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAG-VDLLFA 87 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHHC--SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHTT-CSEEEC
T ss_pred EEEeCCC---ccHHHHHHHHHHHHhC--CEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhCC-CCEEEe
Confidence 4667787 9999999999999995 79999999986432221 146899999999999976 998884
No 70
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=96.02 E-value=0.021 Score=55.80 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=52.2
Q ss_pred CCCeEEE--EcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCC---CCCCCHHHHHHHHHhccccCceee
Q psy5600 46 SRKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG---RTVMNDIERYEAVRHCRYVDEVVR 119 (413)
Q Consensus 46 ~~~~~V~--~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg---~Pv~~~eER~~~V~a~r~VDeVvi 119 (413)
.+.++++ +=|. +|.||..++++|++.+ +.++|.+..+..---.+. +...+.++++++++++. ||.|+.
T Consensus 21 ~g~~I~fVpTmG~---lH~GH~~LI~~a~~~a--~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~G-vD~vf~ 93 (283)
T 3ag6_A 21 SGTTIGFIPTMGA---LHDGHLTMVRESVSTN--DITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEVG-ADIVFH 93 (283)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHTTS--SEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHHT-CSEEEC
T ss_pred cCCcEEEEECCcc---ccHHHHHHHHHHHHhC--CEEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEe
Confidence 3455655 7775 9999999999999995 789999988754221111 34788999999999876 998886
No 71
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.95 E-value=0.0058 Score=59.87 Aligned_cols=37 Identities=22% Similarity=0.268 Sum_probs=31.8
Q ss_pred ccceEEE--EccccccCChhHHHHHHHHHhcCCCcEEEEEEcch
Q psy5600 259 SRKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSD 300 (413)
Q Consensus 259 ~~~~iV~--~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD 300 (413)
.+++|++ |-|+ ||.||+.|+++|++. +|.+||+|.-.
T Consensus 23 ~g~~IgfVPTMG~---LH~GHlsLv~~Ar~~--~d~vVVSIFVN 61 (287)
T 3q12_A 23 EGKRIALVPTMGN---LHEGHMTLVDEAKTR--ADVVVVTIFVN 61 (287)
T ss_dssp TTCCEEEEEECSS---CCHHHHHHHHHHHTT--SSEEEEEECCC
T ss_pred cCCeEEEEcCCCc---ccHHHHHHHHHHHHh--CCEEEEEeccC
Confidence 3567888 8887 999999999999999 69999998644
No 72
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=95.71 E-value=0.011 Score=57.51 Aligned_cols=55 Identities=22% Similarity=0.275 Sum_probs=43.9
Q ss_pred EEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC---CCCCCHHHHHHHHh
Q psy5600 263 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG---RTVMNDEKKFRFQN 322 (413)
Q Consensus 263 iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg---~Pi~~~~eR~~~v~ 322 (413)
.|.|-|. +|.||..|+++|++. ++.+||.+..+..---... +...+.++|+++++
T Consensus 21 ~VpTmG~---lH~GH~~Li~~A~~~--a~~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~ 78 (276)
T 1v8f_A 21 FVPTMGY---LHRGHLALVERARRE--NPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQ 78 (276)
T ss_dssp EEEECSS---CCHHHHHHHHHHHHH--CSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHH
T ss_pred EEEeCCC---ccHHHHHHHHHHHHh--CCEEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHH
Confidence 3557777 999999999999999 5899999998865432222 34788999999997
No 73
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=95.49 E-value=0.026 Score=55.61 Aligned_cols=63 Identities=14% Similarity=0.136 Sum_probs=48.7
Q ss_pred cCccCCCChHHHHHHHHHhh-cCCCCEEEEEEecCcccccCCC---CCCCCHHHHHHHHHhccccCceee
Q psy5600 54 DGIYDMFHQGHSRQLMQAKN-VFPNVYLIVGVCSDALTHRKKG---RTVMNDIERYEAVRHCRYVDEVVR 119 (413)
Q Consensus 54 ~G~FDlfH~GHi~~L~qAk~-lf~gd~LIVGV~sDe~v~~~Kg---~Pv~~~eER~~~V~a~r~VDeVvi 119 (413)
-.++.-+|.||..++++|++ .+ +.++|.+..+..---.+. +...++++++++++++. ||.|+.
T Consensus 38 VpTmG~LH~GH~sLI~~A~~~~a--~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~G-VD~vf~ 104 (301)
T 3cov_A 38 VPTMGALHEGHLALVRAAKRVPG--SVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEG-VEIAFT 104 (301)
T ss_dssp EEECSCCCHHHHHHHHHHHTSTT--EEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHTT-CCEEEC
T ss_pred EecCCcccHHHHHHHHHHHHhcC--CEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhCC-CCEEEe
Confidence 35555599999999999999 74 799999988764222221 24888999999999876 998885
No 74
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=95.37 E-value=0.019 Score=58.50 Aligned_cols=58 Identities=17% Similarity=0.093 Sum_probs=43.4
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhc
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHC 111 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~ 111 (413)
++|+..|||||+|.||..+.++|.+.++.|.|++--.-.. .| .--.+.+.|++|++.+
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~g~----~K-~~di~~~~R~~~~~~~ 250 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLLGK----LK-KGDIPAPVRDAAIRTM 250 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEECC----CC-TTCCCHHHHHHHHHHH
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECCCC----CC-CCCCCHHHHHHHHHHH
Confidence 4577799999999999999999988763355554333221 23 4578999999999963
No 75
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=95.20 E-value=0.016 Score=56.79 Aligned_cols=64 Identities=20% Similarity=0.146 Sum_probs=44.6
Q ss_pred CCCCeEEE--EcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcc-------cccCCCCCCCCHHHHHHHHHhccccC
Q psy5600 45 ASRKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDAL-------THRKKGRTVMNDIERYEAVRHCRYVD 115 (413)
Q Consensus 45 ~~~~~~V~--~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~-------v~~~Kg~Pv~~~eER~~~V~a~r~VD 115 (413)
+.+.++++ +-|+ +|.||+.|+++|++.+ |.+||+|.-+.. ..+| -=++++=++++++. .||
T Consensus 22 ~~g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~--d~vVVSIFVNP~QF~~~EDl~~Y----PRtle~D~~~l~~~-gvd 91 (287)
T 3q12_A 22 QEGKRIALVPTMGN---LHEGHMTLVDEAKTRA--DVVVVTIFVNPLQFERPDDLAHY----PRTLQEDCEKLTRH-GAD 91 (287)
T ss_dssp HTTCCEEEEEECSS---CCHHHHHHHHHHHTTS--SEEEEEECCCGGGCSSHHHHHHS----CCCHHHHHHHHHHH-TCS
T ss_pred HcCCeEEEEcCCCc---ccHHHHHHHHHHHHhC--CEEEEEeccCcccCCCcchhhcC----CCCHHHHHHHHHHC-CCC
Confidence 45667888 7787 9999999999999994 899999987742 1122 22445555555543 477
Q ss_pred cee
Q psy5600 116 EVV 118 (413)
Q Consensus 116 eVv 118 (413)
-|+
T Consensus 92 ~vF 94 (287)
T 3q12_A 92 LVF 94 (287)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 76
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=94.96 E-value=0.036 Score=55.51 Aligned_cols=58 Identities=19% Similarity=0.020 Sum_probs=44.0
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHh-ccc
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRH-CRY 113 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a-~r~ 113 (413)
++|+.-|||||+|.||..+.++|.+.. |.|++--.--. .| .--.+.+.|++|++. +..
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~~--d~vll~P~~g~----~K-~~d~~~~~R~~~~~~~i~~ 214 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLELA--DGVLVHPILGA----KK-PDDFPTEVIVEAYQALIRD 214 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHHS--SEEEEEEBCSC----CC-TTSCCHHHHHHHHHHHHHH
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHhC--CcEEEEECCCC----CC-CCCCCHHHHHHHHHHHHhh
Confidence 456778999999999999999999884 66666433221 22 457999999999996 443
No 77
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=94.29 E-value=0.084 Score=51.59 Aligned_cols=58 Identities=17% Similarity=0.211 Sum_probs=43.4
Q ss_pred cceEEE--EccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC---CCCCCHHHHHHHHh
Q psy5600 260 RKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG---RTVMNDEKKFRFQN 322 (413)
Q Consensus 260 ~~~iV~--~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg---~Pi~~~~eR~~~v~ 322 (413)
+++|++ |-|. +|.||..++++|++. +|.+||.+.....---... +...+.++++++++
T Consensus 22 g~~I~fVpTmG~---lH~GH~~LI~~a~~~--a~~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~ 84 (283)
T 3ag6_A 22 GTTIGFIPTMGA---LHDGHLTMVRESVST--NDITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVS 84 (283)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTT--SSEEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHH
T ss_pred CCcEEEEECCcc---ccHHHHHHHHHHHHh--CCEEEEEEeCChhhcCCccccccCCCCHHHHHHHHH
Confidence 455666 7776 999999999999999 5799999877654322221 23668899999987
No 78
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=94.26 E-value=0.11 Score=51.47 Aligned_cols=69 Identities=17% Similarity=0.194 Sum_probs=50.2
Q ss_pred CCCCCeEEE--EcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCC---CCCCCCHHHHHHHHHhccccCcee
Q psy5600 44 NASRKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKK---GRTVMNDIERYEAVRHCRYVDEVV 118 (413)
Q Consensus 44 ~~~~~~~V~--~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~K---g~Pv~~~eER~~~V~a~r~VDeVv 118 (413)
++.+.++++ +-|. +|.||+.|+++|++.+ |.++|.|.-+..=-... .+..-++++.++++++.. ||.|+
T Consensus 39 r~~g~~IgfVPTMG~---LH~GHlsLi~~A~~~~--d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~G-vD~vF 112 (314)
T 3inn_A 39 RQQGKKIGFVPTMGY---LHKGHLELVRRARVEN--DVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDAQ-VDYLF 112 (314)
T ss_dssp HHTTCCEEEEEECSS---CCHHHHHHHHHHHHHC--SEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHTT-CSEEE
T ss_pred HHcCCeEEEEcCCCc---cCHHHHHHHHHHHHhC--CEEEEEECCChhhcCCCccccccCCCHHHHHHHHHhCC-CCEEE
Confidence 345677888 6685 9999999999999994 89999998875311111 134567888888888754 78664
No 79
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=93.26 E-value=0.072 Score=52.79 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=40.7
Q ss_pred cceEEE--EccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCC---CCCCCHHHHHHHHh
Q psy5600 260 RKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKG---RTVMNDEKKFRFQN 322 (413)
Q Consensus 260 ~~~iV~--~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg---~Pi~~~~eR~~~v~ 322 (413)
+++|++ |-|. +|.||+.|+++|++. +|.+||.|.-...=-.... +=--++++.+++++
T Consensus 42 g~~IgfVPTMG~---LH~GHlsLi~~A~~~--~d~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~ 104 (314)
T 3inn_A 42 GKKIGFVPTMGY---LHKGHLELVRRARVE--NDVTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLH 104 (314)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHHH--CSEEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHH
T ss_pred CCeEEEEcCCCc---cCHHHHHHHHHHHHh--CCEEEEEECCChhhcCCCccccccCCCHHHHHHHHH
Confidence 556777 7785 999999999999999 5899999866543211111 11235677777776
No 80
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=92.07 E-value=0.12 Score=50.49 Aligned_cols=36 Identities=25% Similarity=0.342 Sum_probs=28.4
Q ss_pred cceEEE--EccccccCChhHHHHHHHHHhcCCCcEEEEEEcchh
Q psy5600 260 RKVRVY--ADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDA 301 (413)
Q Consensus 260 ~~~iV~--~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~ 301 (413)
+++|++ |-|. ||.||+.|+++|++ | |.+||.|.-..
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~--d~VVVSIFVNP 61 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-Q--DKVIVSIFVNP 61 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-S--SEEEEEECCCG
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-C--CEEEEEeccCc
Confidence 445555 4464 99999999999999 7 89999986543
No 81
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=91.98 E-value=0.21 Score=48.76 Aligned_cols=68 Identities=12% Similarity=0.089 Sum_probs=50.6
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCC---CCCCCCHHHHHHHHHhccccCcee
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKK---GRTVMNDIERYEAVRHCRYVDEVV 118 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~K---g~Pv~~~eER~~~V~a~r~VDeVv 118 (413)
+.++++ -.|..-+|.||..++++|++.+ |.++|.+.-+..--... .+...+.++++++++.+ .||.|+
T Consensus 21 g~~ig~-VPTMG~LH~GH~sLi~~A~~~~--d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~-GvD~vF 91 (283)
T 3uk2_A 21 QNRTAF-VPTMGNLHEGHLSLMRLARQHG--DPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE-NVYVLF 91 (283)
T ss_dssp CSSCEE-EEECSSCCHHHHHHHHHHHTTC--SSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT-TCSEEE
T ss_pred CCeEEE-ECCCCcccHHHHHHHHHHHHhC--CEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc-CCCEEE
Confidence 444444 4588899999999999999995 78999998776431111 24688899999999875 488765
No 82
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=91.81 E-value=0.24 Score=48.76 Aligned_cols=53 Identities=13% Similarity=0.201 Sum_probs=39.1
Q ss_pred cccccCChhHHHHHHHHHh-cCCCcEEEEEEcchhhhhhcCC---CCCCCHHHHHHHHh
Q psy5600 268 GIYDMFHQGHSRQLMQAKN-VFPNVYLIVGVCSDALTHRKKG---RTVMNDEKKFRFQN 322 (413)
Q Consensus 268 G~FDl~H~GHi~~L~~Ak~-l~~gd~LIVGV~sD~~v~~~Kg---~Pi~~~~eR~~~v~ 322 (413)
.|+.-+|.||+.|+++|++ . +|.+||.+.....---.+. +-..+.++++++++
T Consensus 39 pTmG~LH~GH~sLI~~A~~~~--a~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~ 95 (301)
T 3cov_A 39 PTMGALHEGHLALVRAAKRVP--GSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLR 95 (301)
T ss_dssp EECSCCCHHHHHHHHHHHTST--TEEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHH
T ss_pred ecCCcccHHHHHHHHHHHHhc--CCEEEEEEcCChhhcCCccccccCCCCHHHHHHHHH
Confidence 4444599999999999999 8 5899999876554322221 12667899999987
No 83
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=89.39 E-value=0.41 Score=48.71 Aligned_cols=56 Identities=13% Similarity=0.017 Sum_probs=40.9
Q ss_pred eEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 262 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 262 ~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
+.|...||||.+|.||..+.+.|.+.++.|.|++--.- ...| .--++.+.|+++++
T Consensus 193 ~~VvafqTrNPiHrgH~~l~~~Ale~~~~D~vll~P~~----g~~K-~~di~~~~R~~~~~ 248 (396)
T 1jhd_A 193 SKVVAFQTRNPMHRAHEELCRMAMESLDADGVVVHMLL----GKLK-KGDIPAPVRDAAIR 248 (396)
T ss_dssp SSEEEEEESSCCCHHHHHHHHHHHHHHTCSEEEEEEEE----CCCC-TTCCCHHHHHHHHH
T ss_pred ceEEEeccCCCCchHHHHHHHHHHHHcCCCeEEEEECC----CCCC-CCCCCHHHHHHHHH
Confidence 45666999999999999999999988634665543331 1122 33578899999987
No 84
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=89.28 E-value=0.56 Score=45.80 Aligned_cols=60 Identities=8% Similarity=0.129 Sum_probs=43.8
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcC---CCCCCCHHHHHHHHh
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKK---GRTVMNDEKKFRFQN 322 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~K---g~Pi~~~~eR~~~v~ 322 (413)
+++|+++ .|..-+|.||+.|+++|++. +|.+||.+.-...--... .+-..+.++++++++
T Consensus 21 g~~ig~V-PTMG~LH~GH~sLi~~A~~~--~d~vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~ 83 (283)
T 3uk2_A 21 QNRTAFV-PTMGNLHEGHLSLMRLARQH--GDPVVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQ 83 (283)
T ss_dssp CSSCEEE-EECSSCCHHHHHHHHHHHTT--CSSEEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHH
T ss_pred CCeEEEE-CCCCcccHHHHHHHHHHHHh--CCEEEEEEcCCHHHcCCcccccccCCCHHHHHHHHH
Confidence 4455555 58889999999999999999 478999987666532111 123557888988887
No 85
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=89.05 E-value=0.23 Score=48.03 Aligned_cols=38 Identities=21% Similarity=0.324 Sum_probs=29.3
Q ss_pred cceEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcch
Q psy5600 260 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSD 300 (413)
Q Consensus 260 ~~~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD 300 (413)
+++|+++. |---||.||+.|+++|++. +|.+||.|.-.
T Consensus 23 g~~ig~VP-TMGaLH~GHlsLv~~Ar~~--~d~vVVSIFVN 60 (264)
T 3n8h_A 23 QQKIGFVP-TMGALHNGHISLIKKAKSE--NDVVIVSIFVN 60 (264)
T ss_dssp TSCEEEEE-ECSSCCHHHHHHHHHHHHH--CSEEEEEECCC
T ss_pred CCcEEEEC-CCcchhHHHHHHHHHHHHh--CCEEEEEEccC
Confidence 34455543 4447999999999999999 58999999653
No 86
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=88.22 E-value=0.69 Score=46.20 Aligned_cols=54 Identities=15% Similarity=-0.002 Sum_probs=41.0
Q ss_pred eEEEEccccccCChhHHHHHHHHHhcCCCcEEEEEEcchhhhhhcCCCCCCCHHHHHHHHh
Q psy5600 262 VRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDEKKFRFQN 322 (413)
Q Consensus 262 ~iV~~~G~FDl~H~GHi~~L~~Ak~l~~gd~LIVGV~sD~~v~~~Kg~Pi~~~~eR~~~v~ 322 (413)
+.|...||||.+|.||..+.+.|.+. .|.|++--.- ...| .--++.+.|+++++
T Consensus 156 ~~VvafqTrNPiHrgH~~l~~~ale~--~d~vll~P~~----g~~K-~~d~~~~~R~~~~~ 209 (349)
T 1v47_A 156 RKVVAFQTRNAPHRAHEYLIRLGLEL--ADGVLVHPIL----GAKK-PDDFPTEVIVEAYQ 209 (349)
T ss_dssp CSEEEEEESSCCCHHHHHHHHHHHHH--SSEEEEEEBC----SCCC-TTSCCHHHHHHHHH
T ss_pred CeEEEeecCCCCchHHHHHHHHHHHh--CCcEEEEECC----CCCC-CCCCCHHHHHHHHH
Confidence 45666999999999999999999998 4776664441 1122 33589999999987
No 87
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=87.99 E-value=0.36 Score=47.17 Aligned_cols=67 Identities=18% Similarity=0.188 Sum_probs=43.3
Q ss_pred CCCCeEEEEc--CccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCC---CCCCCCHHHHHHHHHhccccCcee
Q psy5600 45 ASRKVRVYAD--GIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKK---GRTVMNDIERYEAVRHCRYVDEVV 118 (413)
Q Consensus 45 ~~~~~~V~~~--G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~K---g~Pv~~~eER~~~V~a~r~VDeVv 118 (413)
+.+.++++++ |. +|-||+.|+++|++ + |.+||.|.-+..=-... .+.--++++=++++++. .||-|+
T Consensus 22 ~~g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~--d~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~-gvD~vF 93 (285)
T 3mxt_A 22 SHQLSIGYVPTMGF---LHDGHLSLVKHAKT-Q--DKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN-GVDMVF 93 (285)
T ss_dssp HTTCCEEEEEECSS---CCHHHHHHHHHHTT-S--SEEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT-TCSEEE
T ss_pred HcCCeEEEEcCCCc---ccHHHHHHHHHHHh-C--CEEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC-CCCEEE
Confidence 3456666644 64 99999999999999 6 79999998764311000 02233556666666654 477555
No 88
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=87.81 E-value=0.39 Score=46.49 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCc
Q psy5600 45 ASRKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDA 88 (413)
Q Consensus 45 ~~~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe 88 (413)
+.+.++++++ |-=-+|-||+.|+++|++.+ |.++|.|.-+.
T Consensus 21 ~~g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~--d~vVVSIFVNP 61 (264)
T 3n8h_A 21 IKQQKIGFVP-TMGALHNGHISLIKKAKSEN--DVVIVSIFVNP 61 (264)
T ss_dssp CTTSCEEEEE-ECSSCCHHHHHHHHHHHHHC--SEEEEEECCCG
T ss_pred hCCCcEEEEC-CCcchhHHHHHHHHHHHHhC--CEEEEEEccCc
Confidence 4456666665 33479999999999999994 89999998874
No 89
>1pei_A PEPC22; transferase, nucleotidyltransferase, repeat, phospholipid biosynthesis, membrane, phosphorylation; NMR {Rattus norvegicus} SCOP: j.14.1.1
Probab=85.51 E-value=0.22 Score=31.92 Aligned_cols=24 Identities=50% Similarity=0.966 Sum_probs=19.3
Q ss_pred hccchhhhhHhHHhhchhhhccce
Q psy5600 338 IGERRVDMIQKWEEKSRDIIDTFL 361 (413)
Q Consensus 338 v~~~~~d~~~~~e~~~~Dii~~f~ 361 (413)
|.++..|++..|++++.|+|++|+
T Consensus 2 i~e~~~eliskWe~kSre~I~~Fl 25 (26)
T 1pei_A 2 VEEKSIDLIQKWEEKSREFIGSXX 25 (26)
T ss_dssp CCSHHHHHTTHHHHHHHHHHHC--
T ss_pred cchhHHHHHHHHHHHHHHHHHccc
Confidence 456778899999999999999986
No 90
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=48.24 E-value=25 Score=36.64 Aligned_cols=56 Identities=13% Similarity=-0.014 Sum_probs=40.4
Q ss_pred eEEEEcCccCCCChHHHHHHHHHhh-cCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhc
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAKN-VFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHC 111 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk~-lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~ 111 (413)
+.|+.-=|+.|+|.||..++++|.. .+ +.|+|=...- .++.-=++.+-|++.++++
T Consensus 164 ~~v~afqtrnP~Hr~H~~l~~~a~~~~~--~~llv~p~~g-----~~k~~di~~~~R~~~~~~~ 220 (546)
T 2gks_A 164 DKIVAFQTRNPMHRVHEELTKRAMEKVG--GGLLLHPVVG-----LTKPGDVDVYTRMRIYKVL 220 (546)
T ss_dssp SCEEEECCSSCCCHHHHHHHHHHHHHHT--SEEEECCBCS-----BCCTTSCCHHHHHHHHHHH
T ss_pred CcEEEEecCCCCcHHHHHHHHHHHHhcC--CcEEEEeCcC-----CCCCCCCCHHHHHHHHHHH
Confidence 3577788999999999999999986 55 4455422211 1223467999999999986
No 91
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=45.52 E-value=26 Score=35.50 Aligned_cols=56 Identities=18% Similarity=0.113 Sum_probs=36.9
Q ss_pred eEEEEcCccCCCChHHHHHHHHHh-hcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhc
Q psy5600 49 VRVYADGIYDMFHQGHSRQLMQAK-NVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHC 111 (413)
Q Consensus 49 ~~V~~~G~FDlfH~GHi~~L~qAk-~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~ 111 (413)
+.|+.-.|.+|+|.||..++.+|+ +..+ +-|+.-+.. ..+.-=++.+-|+++.+++
T Consensus 188 ~~VvafqtrNP~HraH~e~~~r~a~e~~~-~lllhPlvG------~tK~~Dip~~vR~~~~~~~ 244 (395)
T 1r6x_A 188 DRVVAFQTRNPMHRAHRELTVRAAREANA-KVLIHPVVG------LTKPGDIDHHTRVRVYQEI 244 (395)
T ss_dssp CCEEEECCSSCCCHHHHHHHHHHHHHTTC-EEEECCBCS------BCCTTCCCHHHHHHHHHHH
T ss_pred CcEEEeccCCCcchhhHHHHHHHHHHcCC-cEEEEECCC------CCCCCCCCHHHHHHHHHHH
Confidence 357778999999999977666664 5432 233322221 1223358999999999975
No 92
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=42.53 E-value=29 Score=36.42 Aligned_cols=56 Identities=14% Similarity=0.126 Sum_probs=39.0
Q ss_pred EEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhc
Q psy5600 50 RVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHC 111 (413)
Q Consensus 50 ~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~ 111 (413)
.|+.-=|+.|+|.||..++++|.... ++.|+|-...- ..+.-=++.+-|++.++++
T Consensus 192 ~v~afqtrnP~Hr~H~~l~~~a~~~~-~~~llv~pl~g-----~~k~~di~~~~R~~~~~~~ 247 (573)
T 1m8p_A 192 RVVAFQTRNPMHRAHRELTVRAARSR-QANVLIHPVVG-----LTKPGDIDHFTRVRAYQAL 247 (573)
T ss_dssp SEEEECCSSCCCHHHHHHHHHHHHHT-TCEEEECCBCC-----CCCTTCHHHHHHHHHHHHH
T ss_pred eEEEEeeCCCcchhhHHHHHHHHHhc-CCcEEEEeCCC-----CCCCCCCCHHHHHHHHHHH
Confidence 46667899999999999999998552 24455421111 1223457899999999986
No 93
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=40.88 E-value=30 Score=35.99 Aligned_cols=55 Identities=18% Similarity=0.121 Sum_probs=37.2
Q ss_pred EEEEcCccCCCChHHHHHHHHHh-hcCCCCEEEEEEecCcccccCCCCCCCCHHHHHHHHHhc
Q psy5600 50 RVYADGIYDMFHQGHSRQLMQAK-NVFPNVYLIVGVCSDALTHRKKGRTVMNDIERYEAVRHC 111 (413)
Q Consensus 50 ~V~~~G~FDlfH~GHi~~L~qAk-~lf~gd~LIVGV~sDe~v~~~Kg~Pv~~~eER~~~V~a~ 111 (413)
.|+.-.|.+|+|.||.+++.++. +..+ +-|+.-+..- .+.-=++.+-|+++.+++
T Consensus 190 ~v~afqtrnP~HraH~e~~~~~a~e~~~-~lll~pl~g~------~k~~di~~~~r~~~~~~~ 245 (511)
T 1g8f_A 190 RVVAFQTRNPMHRAHRELTVRAAREANA-KVLIHPVVGL------TKPGDIDHHTRVRVYQEI 245 (511)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHTC-EEEEEEBCSB------CSTTCCCHHHHHHHHHHH
T ss_pred cEEEEecCCCCchHHHHHHHHHHHHcCC-cEEEEECCCC------CCCCCCCHHHHHHHHHHH
Confidence 47778899999999977666654 5442 2344333221 223358999999999975
No 94
>3nkl_A UDP-D-quinovosamine 4-dehydrogenase; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; HET: MSE GOL; 1.90A {Vibrio fischeri}
Probab=25.61 E-value=1.9e+02 Score=23.20 Aligned_cols=71 Identities=15% Similarity=0.133 Sum_probs=41.6
Q ss_pred CCeEEEEcCccCCCChHHHHHHHHHhhcCCCCEEEEEEecCccccc---CCCCCCCCHHHHHHHHHhccccCceeecCCC
Q psy5600 47 RKVRVYADGIYDMFHQGHSRQLMQAKNVFPNVYLIVGVCSDALTHR---KKGRTVMNDIERYEAVRHCRYVDEVVRDAPW 123 (413)
Q Consensus 47 ~~~~V~~~G~FDlfH~GHi~~L~qAk~lf~gd~LIVGV~sDe~v~~---~Kg~Pv~~~eER~~~V~a~r~VDeVvi~ap~ 123 (413)
+.+++++-|+ -+|...+.++-...+ .+-+||+.+|..-.. ..|-|++.. +.+.-+..-..+|+|++..|.
T Consensus 3 ~~~~vlIiGa-----G~~g~~l~~~l~~~~-g~~vvg~~d~~~~~~g~~i~g~pV~g~-~~l~~~~~~~~id~viia~~~ 75 (141)
T 3nkl_A 3 AKKKVLIYGA-----GSAGLQLANMLRQGK-EFHPIAFIDDDRKKHKTTMQGITIYRP-KYLERLIKKHCISTVLLAVPS 75 (141)
T ss_dssp CCEEEEEECC-----SHHHHHHHHHHHHSS-SEEEEEEECSCGGGTTCEETTEEEECG-GGHHHHHHHHTCCEEEECCTT
T ss_pred CCCEEEEECC-----CHHHHHHHHHHHhCC-CcEEEEEEECCcccCCCEecCeEEECH-HHHHHHHHHCCCCEEEEeCCC
Confidence 3456677676 366666655543322 588999998864321 134577773 333322223468999987775
Q ss_pred C
Q psy5600 124 E 124 (413)
Q Consensus 124 ~ 124 (413)
.
T Consensus 76 ~ 76 (141)
T 3nkl_A 76 A 76 (141)
T ss_dssp S
T ss_pred C
Confidence 4
No 95
>1li5_A Cysrs, cysteinyl-tRNA synthetase, transfer RNA-Cys; cysteine, E.coli, ligase; 2.30A {Escherichia coli} SCOP: a.27.1.1 c.26.1.1 PDB: 1li7_A 1u0b_B
Probab=25.11 E-value=35 Score=34.83 Aligned_cols=22 Identities=41% Similarity=0.703 Sum_probs=18.8
Q ss_pred CCCCeEEEEcCcc--CCCChHHHH
Q psy5600 45 ASRKVRVYADGIY--DMFHQGHSR 66 (413)
Q Consensus 45 ~~~~~~V~~~G~F--DlfH~GHi~ 66 (413)
.++++++|+.|-- +++|.||++
T Consensus 19 ~~~~v~~yv~gPt~y~~~HiGHar 42 (461)
T 1li5_A 19 HAGEVGMYVCGITVYDLCHIGHGR 42 (461)
T ss_dssp STTEEEEEECCCBSSSCCBHHHHH
T ss_pred CCCCeeEEEcCCcCCCCCcccccH
Confidence 4667889999976 999999997
No 96
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major}
Probab=23.57 E-value=25 Score=36.64 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=12.7
Q ss_pred cccccccccCCCCCCCeEEEEcCcc----CCCChHHHH
Q psy5600 33 GVDEALFHDNNNASRKVRVYADGIY----DMFHQGHSR 66 (413)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~V~~~G~F----DlfH~GHi~ 66 (413)
+.+-++|.....+.++ ++|+.+.. +++|.||++
T Consensus 11 ~~~~~~~~~~~~~~~~-~~~i~~~~py~ng~lHiGH~r 47 (564)
T 3kfl_A 11 TLEAQTQGPGSMKKQK-VFFATTPIYYVNASPHIGHVY 47 (564)
T ss_dssp -------------CCC-CEEEEEEEEECSSCCCHHHHH
T ss_pred hhhhhhcCCccccCCC-CEEEeCCCCCCCCCCCcchhH
Confidence 3455677654444333 34444433 899999986
No 97
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=21.59 E-value=44 Score=33.41 Aligned_cols=41 Identities=17% Similarity=0.075 Sum_probs=26.3
Q ss_pred CCCeEEEEcCcc--CCCChHHHH------HHHHHhhcCCCCEEEEEEecC
Q psy5600 46 SRKVRVYADGIY--DMFHQGHSR------QLMQAKNVFPNVYLIVGVCSD 87 (413)
Q Consensus 46 ~~~~~V~~~G~F--DlfH~GHi~------~L~qAk~lf~gd~LIVGV~sD 87 (413)
+++.++|+.|-+ +++|.||++ +|.|..++. |-.+.--.+.|
T Consensus 37 ~~~v~~y~~gPt~yg~~HiGHar~~v~~DvlaR~lr~~-G~~V~~~~~~d 85 (414)
T 3c8z_A 37 GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLWLDA-GHTVQYVQNVT 85 (414)
T ss_dssp CSEEEEEECCCCTTSCCBHHHHHHHHHHHHHHHHHHHT-TCEEEEEEEEC
T ss_pred CCCceEEeCCCcCCCCcCccccHHHHHHHHHHHHHHHc-CCCEEeCCCCC
Confidence 556788998877 999999986 445555443 33343333333
No 98
>3tqo_A Cysteinyl-tRNA synthetase; protein synthesis, ligase; 2.30A {Coxiella burnetii}
Probab=20.98 E-value=47 Score=34.22 Aligned_cols=28 Identities=14% Similarity=0.057 Sum_probs=23.6
Q ss_pred ceEEEEccccccCChhHHHHHHHHHhcC
Q psy5600 261 KVRVYADGIYDMFHQGHSRQLMQAKNVF 288 (413)
Q Consensus 261 ~~iV~~~G~FDl~H~GHi~~L~~Ak~l~ 288 (413)
..+-+..|..||+-+=|-+.+.++..+.
T Consensus 222 ~~~dih~gG~Dl~FpHheneiaqs~a~~ 249 (462)
T 3tqo_A 222 QPFDIHGGGLDLKFPHHENEIAQSEAGE 249 (462)
T ss_dssp SSEEEEEEEGGGTTTHHHHHHHHHHHHH
T ss_pred CCeEEEccccccccHHHHhHHHHHHHHc
Confidence 4577888999999999999999987654
Done!