BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5601
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NSB8|HOME2_HUMAN Homer protein homolog 2 OS=Homo sapiens GN=HOMER2 PE=1 SV=1
Length = 354
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/212 (34%), Positives = 101/212 (47%), Gaps = 66/212 (31%)
Query: 1 MTFTKTSQKFGQWSDIRANTVSLV----QAQLDTL------------LASQDAQRRIIDT 44
MTFTKTSQKFGQW+D RANTV + + QL +A Q +I +
Sbjct: 65 MTFTKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVKEAAKIAKDKTQEKIETS 124
Query: 45 LNH-QLAGRVADS----------------------------------------ANAKKWE 63
NH Q +GR S AN KKWE
Sbjct: 125 SNHSQESGRETPSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAANVKKWE 184
Query: 64 IELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVE 123
IEL L+ +N RLT+ALQES A+VE+WK+Q ++EN +L+ K ELE E E
Sbjct: 185 IELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRNKIDELE------EQCSE 238
Query: 124 LRKEL---TSVRSKNETLDSELKCRDEEVKKL 152
+ +E T ++ + E L++EL+ ++ E+K L
Sbjct: 239 INREKEKNTQLKRRIEELEAELREKETELKDL 270
>sp|O88801|HOME2_RAT Homer protein homolog 2 OS=Rattus norvegicus GN=Homer2 PE=1 SV=1
Length = 354
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 104/212 (49%), Gaps = 66/212 (31%)
Query: 1 MTFTKTSQKFGQWSDIRANTVSLV----QAQLDTL------------LASQDAQRRIIDT 44
MTFTKTSQKFGQW+D RANTV + + QL LA +Q +I +
Sbjct: 65 MTFTKTSQKFGQWADSRANTVFGLGFSSEQQLTKFAEKFQEVREAARLARDKSQEKIETS 124
Query: 45 LNH-QLAG-----------------------RVADS-----------------ANAKKWE 63
NH Q +G AD+ AN KKWE
Sbjct: 125 SNHSQESGCETPSSTQASSVNGTDDEKASHASPADTHLKSENDKLKIALTQSAANVKKWE 184
Query: 64 IELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVE 123
IEL L+ +N RLT+ALQES A+VE+WK+Q ++EN +L++K ELE G E
Sbjct: 185 IELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRSKIEELEEQCG------E 238
Query: 124 LRKEL---TSVRSKNETLDSELKCRDEEVKKL 152
+ +E T ++ + E L+SE++ ++ E+K L
Sbjct: 239 INREKEKNTQLKRRIEELESEVREKEMELKDL 270
>sp|Q9Z214|HOME1_RAT Homer protein homolog 1 OS=Rattus norvegicus GN=Homer1 PE=1 SV=2
Length = 366
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 116/244 (47%), Gaps = 45/244 (18%)
Query: 14 SDIRANTVSLVQAQLDTLLASQDAQRRIIDTLNHQLAGRVADSANAKKWEIELANLKSNN 73
D+ N+ + + L S A R L+H A SA +K WE ELA LK NN
Sbjct: 154 PDVTQNSEPRAEPAQNALPFSHSAGDRT-QGLSH------ASSAISKHWEAELATLKGNN 206
Query: 74 LRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVELRKELTSVRS 133
+LT+AL ESTANV++WK+QL AY+EE ++L + ELE VS A + T +
Sbjct: 207 AKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELEC---VSSQANAVHSHKTELSQ 263
Query: 134 KNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEE 193
+ L+ LK ++EE+++ L++E+ + R E DS
Sbjct: 264 TVQELEETLKVKEEEIER-----------------LKQEIDNARELQEQRDS-------- 298
Query: 194 VKKLTNAKHAVEDKCKLLSQENAELQAAISLVQAQLDTLLASQDAQRRIIDTLNHQLAGR 253
LT VE + N +L+ +S ++ +L+ + QDA R + TL L G+
Sbjct: 299 ---LTQKLQEVEIR-------NKDLEGQLSELEQRLEKSQSEQDAFRSNLKTLLEILDGK 348
Query: 254 VAEL 257
+ EL
Sbjct: 349 IFEL 352
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 MTFTKTSQKFGQWSDIRANTV 21
MTFTKTSQKFGQW+D RANTV
Sbjct: 65 MTFTKTSQKFGQWADSRANTV 85
>sp|Q9Z2Y3|HOME1_MOUSE Homer protein homolog 1 OS=Mus musculus GN=Homer1 PE=1 SV=2
Length = 366
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 91/162 (56%), Gaps = 11/162 (6%)
Query: 54 ADSANAKKWEIELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEA 113
A SA +K WE ELA LK NN +LT+AL ESTANV++WK+QL AY+EE ++L + ELE
Sbjct: 187 ASSAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELEC 246
Query: 114 TKGVSEAAVELRKELTSVRSKNETLDSELKCRDEEVKKLT----NAKHAVEDKCKAAVEL 169
VS A + T + + L+ LK ++EE+++L NA+ E + L
Sbjct: 247 ---VSSQANAVHSHKTELNQTVQELEETLKVKEEEIERLKQEIDNARELQEQRDS----L 299
Query: 170 RKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLL 211
++L V +N+ L+ +L ++ ++K N + A K L
Sbjct: 300 TQKLQEVEIRNKDLEGQLSDLEQRLEKSQNEQEAFRSNLKTL 341
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 MTFTKTSQKFGQWSDIRANTV 21
MTFTKTSQKFGQW+D RANTV
Sbjct: 65 MTFTKTSQKFGQWADSRANTV 85
>sp|Q2KJ56|HOME1_BOVIN Homer protein homolog 1 OS=Bos taurus GN=HOMER1 PE=2 SV=1
Length = 354
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 11/160 (6%)
Query: 56 SANAKKWEIELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATK 115
SA +K WE ELA LK NN +LT+AL ESTANV++WK+QL AY+EE ++L + ELE
Sbjct: 177 SAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELEC-- 234
Query: 116 GVSEAAVELRKELTSVRSKNETLDSELKCRDEEVKKLT----NAKHAVEDKCKAAVELRK 171
VS A + T + + L+ LK ++EE+++L NA+ E + L +
Sbjct: 235 -VSSQANAVHTHKTELNQTIQELEETLKVKEEEIERLKQEIDNARELQEQRDS----LTQ 289
Query: 172 ELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLL 211
+L V +N+ L+ +L ++ ++K N + A + K L
Sbjct: 290 KLQEVEIRNKDLEGQLSDLEQRLEKSQNEQEAFRNNLKTL 329
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 MTFTKTSQKFGQWSDIRANTV 21
MTFTKTSQKFGQW+D RANTV
Sbjct: 65 MTFTKTSQKFGQWADSRANTV 85
>sp|Q9QWW1|HOME2_MOUSE Homer protein homolog 2 OS=Mus musculus GN=Homer2 PE=1 SV=1
Length = 354
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 66/100 (66%), Gaps = 9/100 (9%)
Query: 56 SANAKKWEIELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATK 115
+AN KKWE+EL L+ +N RLT+ALQES A+VE+WK+Q ++EN +L++K ELE
Sbjct: 177 AANVKKWEMELQTLRESNARLTTALQESAASVEQWKRQFSICRDENDRLRSKIEELE--- 233
Query: 116 GVSEAAVELRKEL---TSVRSKNETLDSELKCRDEEVKKL 152
E E+ +E T ++ + E L+SE++ ++ E+K L
Sbjct: 234 ---EQCSEINREKEKNTQLKRRIEELESEVRDKEMELKDL 270
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 106/226 (46%), Gaps = 49/226 (21%)
Query: 1 MTFTKTSQKFGQWSDIRANTVSLV---------------------------QAQLDTLLA 33
MTFTKTSQKFGQW+D RANTV + ++Q T +
Sbjct: 65 MTFTKTSQKFGQWADSRANTVFGLGFSSELQLTKFAEKFQEVREAARLARDKSQEKTETS 124
Query: 34 SQDAQRRIIDTLNHQLAGRVADSANAKKWEIELAN--LKSNNLRLTSALQESTANVEEWK 91
S +Q +T + A V + + K A+ LKS N +L AL +S ANV++W+
Sbjct: 125 SNHSQESGCETPSSTQASSVNGTDDEKASHASPADTHLKSENDKLKIALTQSAANVKKWE 184
Query: 92 KQLQAYKEENQKLKTKYIELEATKGVSEAAVELRKELTSVRSKNETLDSELKCRDEEVKK 151
+LQ +E N +L T E S A+VE K S+ CRDE +
Sbjct: 185 MELQTLRESNARLTTALQE-------SAASVEQWKRQFSI------------CRDEN-DR 224
Query: 152 LTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEEVKKL 197
L + +E++C +++ T ++ + E L+SE++ ++ E+K L
Sbjct: 225 LRSKIEELEEQCSEINREKEKNTQLKRRIEELESEVRDKEMELKDL 270
>sp|Q86YM7|HOME1_HUMAN Homer protein homolog 1 OS=Homo sapiens GN=HOMER1 PE=1 SV=2
Length = 354
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%), Gaps = 11/160 (6%)
Query: 56 SANAKKWEIELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATK 115
SA +K WE ELA LK NN +LT+AL ESTANV++WK+QL AY+EE ++L + ELE
Sbjct: 177 SAISKHWEAELATLKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTELECVS 236
Query: 116 GVSEAAVELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTS 175
+ A + EL N+T+ + + +++ K + D + E R LT
Sbjct: 237 SQANAVHTHKTEL------NQTIQELEETLKLKEEEIERLKQEI-DNARELQEQRDSLTQ 289
Query: 176 ----VRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLL 211
V +N+ L+ +L ++ ++K N + A + K L
Sbjct: 290 KLQEVEIRNKDLEGQLSDLEQRLEKSQNEQEAFRNNLKTL 329
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 MTFTKTSQKFGQWSDIRANTV 21
MTFTKTSQKFGQW+D RANTV
Sbjct: 65 MTFTKTSQKFGQWADSRANTV 85
>sp|Q9NSC5|HOME3_HUMAN Homer protein homolog 3 OS=Homo sapiens GN=HOMER3 PE=1 SV=2
Length = 361
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 86/208 (41%), Gaps = 57/208 (27%)
Query: 1 MTFTKTSQKFGQWSDIRANTV---SLVQAQLDTLLA----------------SQDAQRRI 41
MTFTKTSQKFGQW+D RANTV Q T A SQD
Sbjct: 68 MTFTKTSQKFGQWADSRANTVYGLGFASEQHLTQFAEKFQEVKEAARLAREKSQDGGELT 127
Query: 42 IDTLN---HQLAGRVADSANAK----------------------------------KWEI 64
L HQ+ SAN +WE
Sbjct: 128 SPALGLASHQVPPSPLVSANGPGEEKLFRSQSADAPGPTERERLKKMLSEGSVGEVQWEA 187
Query: 65 ELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVEL 124
E L+ +N +L AL+E+ A +W++QL+A + E ++L+ + ELEA + SE
Sbjct: 188 EFFALQDSNNKLAGALREANAAAAQWRQQLEAQRAEAERLRQRVAELEA-QAASEVTPTG 246
Query: 125 RKELTSVRSKNETLDSELKCRDEEVKKL 152
KE E L++ ++ +D+E++ L
Sbjct: 247 EKEGLGQGQSLEQLEALVQTKDQEIQTL 274
>sp|Q99JP6|HOME3_MOUSE Homer protein homolog 3 OS=Mus musculus GN=Homer3 PE=1 SV=2
Length = 356
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 100/245 (40%), Gaps = 60/245 (24%)
Query: 1 MTFTKTSQKFGQWSDIRANT---VSLVQAQLDTLLA----------------SQDAQRRI 41
MTFTKTSQKFGQW+D RANT + Q T A SQD
Sbjct: 68 MTFTKTSQKFGQWADSRANTVYGLGFASEQQLTQFAEKFQEVKEAARLAREKSQDGGEFT 127
Query: 42 IDTL---NHQLAGRVADSANAK----------------------------------KWEI 64
L +HQ+ S N +WE
Sbjct: 128 STGLALASHQVPPSPLVSTNGPGEEKLFRSQSADTPGPTERERLKKMLSEGSVGEVQWEA 187
Query: 65 ELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVEL 124
E L+ +N RL AL+E+ A +W++QL+ + E + L+ + ELEA V E
Sbjct: 188 EFFALQDSNQRLAGALREANAAATQWRQQLEVQRAEAELLRQRVAELEAQVAV-EPVRAG 246
Query: 125 RKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLD 184
KE TS E L++ ++ +D+ +K + D + E ++++ + ++N L+
Sbjct: 247 EKEATS--QSVEQLEARVQTKDQTLKNQSTGTREAPDTAERE-ETQQQVQDLETRNAELE 303
Query: 185 SELKC 189
+L+
Sbjct: 304 QQLRS 308
>sp|Q9Z2X5|HOME3_RAT Homer protein homolog 3 OS=Rattus norvegicus GN=Homer3 PE=2 SV=2
Length = 358
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
Query: 61 KWEIELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEA 120
+WE E L+ +N RL AL+E+ A +W++QL+ + E + L+ + ELEA + +E
Sbjct: 183 QWEAEFFALQDSNQRLAGALREANAAATQWRQQLEVQRAEAEHLRQRVAELEA-QVAAEP 241
Query: 121 AVELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAA--VELRKELTSVRS 178
KE TS E L++ ++ +D+E++ L N + A E ++++ + +
Sbjct: 242 VRAGEKEATS--QSVEQLEARVQTKDQEIQTLKNQSTGPREAPDTAEREETQQQVQDLET 299
Query: 179 KNETLDSELKC 189
+N L+ +L+
Sbjct: 300 RNAELEQQLRA 310
Score = 47.8 bits (112), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 MTFTKTSQKFGQWSDIRANTV 21
MTFTKTSQKFGQW+D RANTV
Sbjct: 68 MTFTKTSQKFGQWADSRANTV 88
>sp|Q9BSW2|EFC4B_HUMAN EF-hand calcium-binding domain-containing protein 4B OS=Homo
sapiens GN=EFCAB4B PE=1 SV=1
Length = 395
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 66 LANLKSNNLRLTSALQESTANVEEW----KKQLQAYKEENQKLKTKYIELEATKGVSEAA 121
L+N + R+ S LQE+ E K+++ AY EE Q L Y E+E + SE
Sbjct: 194 LSNFEDFLTRIISQLQEAHEEKNELECALKRKIAAYDEEIQHL---YEEME-QQIKSEKE 249
Query: 122 VELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKA 165
L K+ +++++ L+ +L C+++E+++LT + +E +C A
Sbjct: 250 QFLLKDTERFQARSQELEQKLLCKEQELEQLTQKQKRLEGQCTA 293
>sp|O61308|PUMA_PARUN 227 kDa spindle- and centromere-associated protein OS=Parascaris
univalens GN=PUMA1 PE=2 SV=1
Length = 1955
Score = 33.1 bits (74), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 8/179 (4%)
Query: 45 LNHQLAGRVADSANA----KKWEIELANLKSNNLRLTSALQESTANVEEWKKQLQAYKEE 100
L QL +D ANA ++ E ELA +++ L ++ + + E ++QLQ E
Sbjct: 1547 LRSQLGVAQSDLANASGRKQQLEGELAAVRAELRDHKQHLHDAISRIAELQRQLQDANAE 1606
Query: 101 NQKLKTKYIELEATKG-VSEAAVELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAV 159
+L + I LE T G + ELR +L++ + + L+SEL+ + ++ + K V
Sbjct: 1607 KSRLTDRIIGLEKTIGTLRNTETELRAQLSTAADERKALNSELEEMRRRIVQMESEKKDV 1666
Query: 160 EDKCKAAVELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLLSQENAEL 218
+++ + E+ K + K E L++E + + + + + A+E L +EN EL
Sbjct: 1667 DNQLE---EVNKARIIMTKKIEILETEKHSAELVISETASQREAIERSLNALERENKEL 1722
>sp|Q8CDI7|CC150_MOUSE Coiled-coil domain-containing protein 150 OS=Mus musculus
GN=Ccdc150 PE=2 SV=2
Length = 1110
Score = 32.7 bits (73), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 67/158 (42%), Gaps = 30/158 (18%)
Query: 101 NQKLKTKYI----ELEATKGVSEAAVELRKELTSVRSKNET-LDSELKCRD--------- 146
N+ L+ KY EL A+K E KE+ S+ KNE L +KCRD
Sbjct: 607 NKALEVKYTQANSELSASKAYLEQTEAHLKEMKSILGKNEEELAQAVKCRDAALKESQKL 666
Query: 147 ---------EEVKKLTNAK----HAVEDKCKAAVELRKELTS---VRSKNETLDSELKCR 190
E KK+ N + A ED CK + L L S ++ E + EL R
Sbjct: 667 KGDLKALEDRESKKVGNFQKQLAEAKEDNCKVTIMLENVLASHSKMQGALEKVQIELGRR 726
Query: 191 DEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQAQ 228
D E+ L + + + + L E + QA + +V+AQ
Sbjct: 727 DSEIAGLKKERSLNQQRVQKLEAEVDQWQARMLIVEAQ 764
>sp|P29616|MYSC_CHICK Myosin heavy chain, cardiac muscle isoform (Fragment) OS=Gallus
gallus PE=1 SV=1
Length = 1102
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 29/189 (15%)
Query: 63 EIELANLKSNNLRLTSALQESTANVEEWK-KQLQAYKEENQKLKTKYIELEATKGVSEAA 121
E E+AN+K L+L AL++S A +E + KQ+ +E+N L ++L+A + A
Sbjct: 12 EKEMANMKEEFLKLKEALEKSEARRKELEEKQVSLVQEKNDLL----LQLQAEQDTLADA 67
Query: 122 VE----LRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVR 177
E L K + +K + L ++ +E +LT+ K +ED+C EL+K++
Sbjct: 68 EERCDLLIKSKIQLEAKVKELTERVEDEEEMNSELTSKKRKLEDEC---SELKKDID--- 121
Query: 178 SKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQAQLDTLLASQD 237
D E+ + K+ KHA E+K K L++E A L IS + + +L Q+
Sbjct: 122 ------DLEIT-----LAKVEKEKHATENKVKNLTEEMATLDENISKLTKEKKSL---QE 167
Query: 238 AQRRIIDTL 246
A ++++D L
Sbjct: 168 AHQQVLDDL 176
>sp|O97557|TUFT1_PIG Tuftelin (Fragment) OS=Sus scrofa GN=TUFT1 PE=2 SV=1
Length = 188
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 29 DTLLASQDAQRRIIDTLNHQLAGRVADSANAKKWEIELANLKSNNLRLTSALQESTANVE 88
D L+ Q+A+R+ HQ + RV A +++ E R +++ A VE
Sbjct: 8 DLLVQLQEAERQ------HQ-SERVDFEATLSRYQREAEQSHVALQRAEDRVEQKEAEVE 60
Query: 89 EWKKQLQAYKEENQKLKTKYIE----LEATKGVS-------EAAVELRKELTSVRSKNET 137
E +K+L + E+Q L K E LE +G + E A L KE+ +R K
Sbjct: 61 ELQKRLLGMETEHQALLAKVREGVTALEELRGKNSDCRAEQEKAANLEKEVAGLREKIHH 120
Query: 138 LDSELKCRDEEVK----KLTNAKHAVEDKCKAAVELRKELTSVRSKN 180
LD LK + +V+ +L N+K ++ K A EL++++ + ++N
Sbjct: 121 LDDMLKSQQRKVRQMIEQLQNSKTVIQSKDTAIQELKEKIAYLEAEN 167
>sp|P22312|PU92_SCICO Puff II/9-2 protein OS=Sciara coprophila GN=II/9-2 PE=2 SV=1
Length = 286
Score = 32.0 bits (71), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 23/166 (13%)
Query: 68 NLKSNNLRLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVELRKE 127
NLK +L L E+ +E+ KK+L K+EN KL K EL T +L+++
Sbjct: 112 NLKETIEQLKKELAEAQKALEKCKKELADCKKENAKLLNKIEELNCT------ITQLQEK 165
Query: 128 LTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSEL 187
L R + L +L DE KKL + + + RK+ +R K E L++
Sbjct: 166 LERCRGRERDLQCQL---DECKKKLNICNNEL-------IACRKQQEELRCKIERLNT-- 213
Query: 188 KCRDEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQAQLDTLL 233
E++KL A E L E +E A + Q+QL +++
Sbjct: 214 -----EIEKLRKQNAACEKDLNTLRCETSEFLAIATQRQSQLTSII 254
>sp|O15078|CE290_HUMAN Centrosomal protein of 290 kDa OS=Homo sapiens GN=CEP290 PE=1 SV=2
Length = 2479
Score = 32.0 bits (71), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 134 KNETLDSELKCRDEEVKKLTNAKHAV-----EDKCKAAVELRKELTSVRSKNETLDSELK 188
+N L +L +++ K T +K ++ +D C+ EL+KE + S+N L +L+
Sbjct: 2021 QNRYLQEKLHALEKQFSKDTYSKPSISGIESDDHCQREQELQKENLKLSSENIELKFQLE 2080
Query: 189 CRDEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQA 227
++++ +L N +++ C+ L +E AE+Q + V+
Sbjct: 2081 QANKDLPRLKNQVRDLKEMCEFLKKEKAEVQRKLGHVRG 2119
>sp|P91349|SPD5_CAEEL Spindle-defective protein 5 OS=Caenorhabditis elegans GN=spd-5 PE=1
SV=2
Length = 1198
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 11/114 (9%)
Query: 94 LQAYKEENQKLKTKYIELEAT-----KGVSEAAVELRKELTSVRSKNETLDSELKCRD-- 146
LQ KEEN LK+++ ELEA + E EL + L V + ET +K +
Sbjct: 756 LQKAKEENSTLKSQFAELEANLHQVNSKLGEVRCELNEALARVDGEQET---RVKAENAL 812
Query: 147 EEVKKLTNA-KHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEEVKKLTN 199
EE ++L ++ KH + K ++ L + +E L SEL EE KK N
Sbjct: 813 EEARQLISSLKHEENELKKTITDMGMRLNEAKKSDEFLKSELSTALEEEKKSQN 866
>sp|Q8SZ63|GOGA5_DROME Golgin-84 OS=Drosophila melanogaster GN=Golgin84 PE=1 SV=2
Length = 516
Score = 31.6 bits (70), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 30/210 (14%)
Query: 28 LDTLLASQDAQR-RIIDTLNHQLAGRVADSANAKKWEIELANLKSNNLRLTSALQESTAN 86
L+ L+ S +R + + N A +A + + E LA L+ + LQ T
Sbjct: 151 LEALVKSLSEERDKAVHDYNEAQAANMAYVHSISELETNLAKLQQEYISAAHKLQMQTKE 210
Query: 87 VEEWKKQLQAYKEENQK-----------LKTKYIELEATKGVSEAAVELRKELTSVRSKN 135
E+ +++LQ Y+ + Q+ LK K E +G V E ++ ++
Sbjct: 211 TEQQRQELQEYRIKAQRALQAKDSLIAELKAKPTE----EGADPNLVSKDSETRFLQIEH 266
Query: 136 ETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEEVK 195
E+L EL+ +EE++K A+ ++D + + EL+S R + ETL EL+ E
Sbjct: 267 ESLKQELEHANEELQK---ARLQLDDYVSQERQRQVELSSARQREETLAKELRQARE--- 320
Query: 196 KLTNAKHAV--EDKCKLLSQENAELQAAIS 223
H+V E ++L+QE A L+ +S
Sbjct: 321 ------HSVTSESDQRVLTQELASLRQQLS 344
>sp|Q9C5Y4|SMC21_ARATH Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis
thaliana GN=SMC2-1 PE=2 SV=2
Length = 1175
Score = 31.2 bits (69), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 168 ELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQA 227
+L K + +++++ + +LK + E +KL + A + QE + L++ ++ ++
Sbjct: 791 DLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEA-------MKQEQSSLESHLTSLET 843
Query: 228 QLDTLLASQDAQRRIIDTLNHQLAGRVAELATIH 261
Q+ TL + D QR +D L +AEL IH
Sbjct: 844 QISTLTSEVDEQRAKVDALQKIHDESLAELKLIH 877
>sp|Q8TBY8|PMFBP_HUMAN Polyamine-modulated factor 1-binding protein 1 OS=Homo sapiens
GN=PMFBP1 PE=2 SV=1
Length = 1022
Score = 31.2 bits (69), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 77/155 (49%), Gaps = 13/155 (8%)
Query: 115 KGVSEAAVELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELT 174
K V+E +++ L ++ ++ S +KC+ EE L A +EDK R++L
Sbjct: 580 KTVAEQDMKMNDMLDRIKHQHREQGS-IKCKLEE--DLQEATKLLEDK-------REQLK 629
Query: 175 SVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQAQLDTLLA 234
+ + ++ EL+ +E KK +++ + L +EN L+A + QL++ L
Sbjct: 630 KSKEHEKLMEGELEALRQEFKK---KDKTLKENSRKLEEENENLRAELQCCSTQLESSLN 686
Query: 235 SQDAQRRIIDTLNHQLAGRVAELATIHREINTALQ 269
+ +++I LN ++A + L ++ +++ ALQ
Sbjct: 687 KYNTSQQVIQDLNKEIALQKESLMSLQAQLDKALQ 721
>sp|Q8IUD2|RB6I2_HUMAN ELKS/Rab6-interacting/CAST family member 1 OS=Homo sapiens GN=ERC1
PE=1 SV=1
Length = 1116
Score = 31.2 bits (69), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 17 RANTVSLVQAQLDTLLASQDAQRRIIDTLNHQLAGRVADSANAKK--WEIELANLKSNNL 74
R NT+ +Q QL +L D R+ ++ +L+ S N+ K W EL K L
Sbjct: 147 RDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLSS----SMNSIKTFWSPELK--KERAL 200
Query: 75 RLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVELRKELTSVRSK 134
R ++ + + WK+Q + +EENQ ++ L+ + +L ++ +S R+
Sbjct: 201 R-----KDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRT- 254
Query: 135 NETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEEV 194
E +EL +E ++L +A+H E + K LRK L + + ET L RDE +
Sbjct: 255 GEPCVAELT--EENFQRL-HAEH--ERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Query: 195 KKL 197
KKL
Sbjct: 310 KKL 312
>sp|Q99MI1|RB6I2_MOUSE ELKS/Rab6-interacting/CAST family member 1 OS=Mus musculus GN=Erc1
PE=1 SV=1
Length = 1120
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 17 RANTVSLVQAQLDTLLASQDAQRRIIDTLNHQLAGRVADSANAKK--WEIELANLKSNNL 74
R NT+ +Q QL +L D R+ ++ +L+ S N+ K W EL K L
Sbjct: 147 RDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLSS----SMNSIKTFWSPELK--KERAL 200
Query: 75 RLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVELRKELTSVRSK 134
R ++ + + WK+Q + +EENQ ++ L+ + +L ++ +S R+
Sbjct: 201 R-----KDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRT- 254
Query: 135 NETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEEV 194
E +EL +E ++L +A+H E + K LRK L + + ET L RDE +
Sbjct: 255 GEPCVAELT--EENFQRL-HAEH--ERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Query: 195 KKL 197
KKL
Sbjct: 310 KKL 312
>sp|B0WPU9|HOOK_CULQU Protein hook OS=Culex quinquefasciatus GN=hk PE=3 SV=2
Length = 691
Score = 31.2 bits (69), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 46/200 (23%)
Query: 72 NNLRLTSALQE---------------STANVEEWKKQLQAYKEENQKLKTKYIELEATKG 116
++L++ SA+QE +TA + + K ++ KE N KLK +L+ K
Sbjct: 266 DDLKMKSAMQEKEISDLQVKIDELHSATAEIAQLKDEIDILKEANDKLKICETQLQTYKK 325
Query: 117 VSEAAVELRKELTSVRSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSV 176
E +L+K++ + ++ + +EE KK K VE +KE+ +
Sbjct: 326 KLEDYNDLKKQIKMLEERSAEYLKQNSDFEEEAKKYAGLKGQVE-------LYKKEIQDL 378
Query: 177 RSKNETLDSELKCRDEEVKKLTNAKHAVEDKCKLLSQENAELQAAISLVQAQLDTLLASQ 236
+K LDSE+ K E+ +LQA +S VQ + + LL+ +
Sbjct: 379 HAK---LDSEMG------------------KTMKTEFEHNQLQAKLSAVQREKENLLSER 417
Query: 237 DAQRRIIDTLNHQLAGRVAE 256
DA R D L G+ AE
Sbjct: 418 DALREACDELK---CGQAAE 434
>sp|Q811U3|RB6I2_RAT ELKS/Rab6-interacting/CAST family member 1 OS=Rattus norvegicus
GN=Erc1 PE=1 SV=1
Length = 948
Score = 30.8 bits (68), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 19/183 (10%)
Query: 17 RANTVSLVQAQLDTLLASQDAQRRIIDTLNHQLAGRVADSANAKK--WEIELANLKSNNL 74
R NT+ +Q QL +L D R+ ++ +L+ S N+ K W EL K L
Sbjct: 147 RDNTIMDLQTQLKEVLRENDLLRKDVEVKESKLSS----SMNSIKTFWSPELK--KERAL 200
Query: 75 RLTSALQESTANVEEWKKQLQAYKEENQKLKTKYIELEATKGVSEAAVELRKELTSVRSK 134
R ++ + + WK+Q + +EENQ ++ L+ + +L ++ +S R+
Sbjct: 201 R-----KDEASKITIWKEQYRVVQEENQHMQMTIQALQDELRIQRDLNQLFQQDSSSRT- 254
Query: 135 NETLDSELKCRDEEVKKLTNAKHAVEDKCKAAVELRKELTSVRSKNETLDSELKCRDEEV 194
E +EL +E ++L +A+H E + K LRK L + + ET L RDE +
Sbjct: 255 GEPCVAELT--EENFQRL-HAEH--ERQAKELFLLRKTLEEMELRIETQKQTLNARDESI 309
Query: 195 KKL 197
KKL
Sbjct: 310 KKL 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.121 0.317
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,022,107
Number of Sequences: 539616
Number of extensions: 2790938
Number of successful extensions: 23195
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 2059
Number of HSP's that attempted gapping in prelim test: 17543
Number of HSP's gapped (non-prelim): 5600
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)