Query psy5603
Match_columns 455
No_of_seqs 400 out of 2331
Neff 8.7
Searched_HMMs 46136
Date Fri Aug 16 21:45:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5603.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5603hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187|consensus 100.0 7.7E-54 1.7E-58 425.6 26.6 281 150-453 61-353 (361)
2 KOG0575|consensus 100.0 9.1E-49 2E-53 390.8 21.6 248 170-447 18-268 (592)
3 KOG0192|consensus 100.0 3E-48 6.6E-53 383.3 25.1 251 176-454 47-305 (362)
4 KOG0615|consensus 100.0 3.3E-49 7.1E-54 376.6 15.2 257 168-447 170-436 (475)
5 KOG0581|consensus 100.0 1.6E-48 3.4E-53 369.4 19.7 241 176-447 85-334 (364)
6 KOG0595|consensus 100.0 8E-47 1.7E-51 360.7 20.8 205 171-395 11-224 (429)
7 KOG0598|consensus 100.0 3.3E-47 7.1E-52 360.3 17.5 237 174-440 29-269 (357)
8 KOG0197|consensus 100.0 1.2E-46 2.7E-51 371.8 21.0 249 176-454 212-463 (468)
9 KOG0591|consensus 100.0 4.3E-47 9.2E-52 346.0 12.3 253 173-449 22-282 (375)
10 KOG0592|consensus 100.0 2.2E-45 4.7E-50 361.1 18.2 248 173-447 76-337 (604)
11 KOG0593|consensus 100.0 1.9E-45 4.2E-50 338.3 16.2 257 172-447 4-283 (396)
12 KOG0616|consensus 100.0 6E-45 1.3E-49 334.3 18.4 231 176-439 50-283 (355)
13 KOG0198|consensus 100.0 6.3E-45 1.4E-49 349.8 19.2 250 172-448 19-276 (313)
14 KOG0583|consensus 100.0 6.3E-44 1.4E-48 355.4 23.2 249 170-446 17-273 (370)
15 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.8E-43 6E-48 350.0 22.9 258 172-454 9-336 (338)
16 KOG0578|consensus 100.0 2.4E-43 5.2E-48 349.3 19.5 260 157-447 260-522 (550)
17 KOG0193|consensus 100.0 6.3E-44 1.4E-48 354.7 15.3 257 173-454 395-655 (678)
18 KOG0582|consensus 100.0 5.6E-43 1.2E-47 337.0 21.1 260 171-447 27-292 (516)
19 KOG0588|consensus 100.0 3.8E-43 8.2E-48 351.9 19.2 245 172-447 14-262 (786)
20 PHA02988 hypothetical protein; 100.0 2.9E-42 6.3E-47 334.5 24.0 262 149-452 10-279 (283)
21 KOG0661|consensus 100.0 8.4E-44 1.8E-48 345.0 13.0 256 171-447 11-290 (538)
22 KOG0659|consensus 100.0 2.7E-42 5.9E-47 312.5 19.5 257 172-447 4-280 (318)
23 KOG0605|consensus 100.0 1.5E-42 3.3E-47 341.3 19.0 245 173-441 144-435 (550)
24 KOG4721|consensus 100.0 2.6E-43 5.6E-48 346.6 13.4 235 176-450 130-366 (904)
25 KOG0600|consensus 100.0 1.8E-42 3.8E-47 338.1 18.3 257 173-447 120-399 (560)
26 KOG0585|consensus 100.0 2E-42 4.4E-47 335.1 18.6 262 171-447 98-371 (576)
27 KOG0597|consensus 100.0 1.1E-42 2.4E-47 342.3 16.8 243 173-447 5-250 (808)
28 KOG0694|consensus 100.0 1.7E-42 3.7E-47 349.6 18.5 238 174-442 372-613 (694)
29 cd05571 STKc_PKB Catalytic dom 100.0 6.5E-42 1.4E-46 338.3 21.8 242 176-447 1-250 (323)
30 cd05612 STKc_PRKX_like Catalyt 100.0 8.3E-42 1.8E-46 332.5 22.2 243 172-447 3-253 (291)
31 PTZ00263 protein kinase A cata 100.0 5.1E-42 1.1E-46 339.9 19.2 242 172-446 20-269 (329)
32 KOG0580|consensus 100.0 2E-42 4.4E-47 309.1 14.3 245 173-447 25-272 (281)
33 cd05585 STKc_YPK1_like Catalyt 100.0 8.5E-42 1.8E-46 335.8 20.0 238 178-445 1-241 (312)
34 cd05104 PTKc_Kit Catalytic dom 100.0 1.2E-41 2.5E-46 343.3 21.2 257 172-453 37-375 (375)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 2.6E-41 5.7E-46 330.8 22.8 262 171-451 6-304 (304)
36 cd05595 STKc_PKB_beta Catalyti 100.0 3.2E-41 7E-46 333.3 23.1 242 176-447 1-250 (323)
37 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-41 5.2E-46 335.0 21.1 242 176-447 1-250 (328)
38 KOG1026|consensus 100.0 2.9E-42 6.4E-47 356.3 14.9 253 175-453 491-763 (774)
39 cd05631 STKc_GRK4 Catalytic do 100.0 3.6E-41 7.8E-46 326.9 21.7 250 173-447 3-260 (285)
40 PTZ00426 cAMP-dependent protei 100.0 1.9E-41 4.2E-46 337.2 19.4 242 173-447 33-283 (340)
41 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.8E-41 1.7E-45 321.1 22.5 253 172-453 7-266 (266)
42 cd05106 PTKc_CSF-1R Catalytic 100.0 5.4E-41 1.2E-45 338.3 22.1 256 173-453 41-373 (374)
43 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.8E-41 8.3E-46 334.1 20.7 251 172-447 3-256 (333)
44 cd07848 STKc_CDKL5 Catalytic d 100.0 7.5E-41 1.6E-45 324.4 22.3 258 172-447 3-283 (287)
45 cd07859 STKc_TDY_MAPK_plant Ca 100.0 5.8E-41 1.3E-45 332.9 21.3 259 172-447 2-289 (338)
46 cd07871 STKc_PCTAIRE3 Catalyti 100.0 9.7E-41 2.1E-45 324.4 22.3 260 168-447 3-284 (288)
47 KOG0611|consensus 100.0 1.9E-41 4.1E-46 322.1 16.5 248 169-448 52-303 (668)
48 cd05584 STKc_p70S6K Catalytic 100.0 7.1E-41 1.5E-45 330.9 21.2 243 176-447 2-255 (323)
49 cd05116 PTKc_Syk Catalytic dom 100.0 3.1E-40 6.6E-45 315.1 24.9 249 177-452 2-255 (257)
50 KOG0194|consensus 100.0 2.1E-41 4.5E-46 339.5 17.0 253 175-454 162-422 (474)
51 cd05108 PTKc_EGFR Catalytic do 100.0 1.6E-40 3.5E-45 327.1 23.2 254 173-454 10-270 (316)
52 KOG0201|consensus 100.0 3.3E-42 7.2E-47 331.4 10.6 242 175-447 18-262 (467)
53 KOG0663|consensus 100.0 4.2E-41 9.2E-46 313.4 17.5 255 174-447 80-360 (419)
54 cd05590 STKc_nPKC_eta Catalyti 100.0 1.2E-40 2.7E-45 328.7 20.7 237 176-442 1-241 (320)
55 cd05071 PTKc_Src Catalytic dom 100.0 4.8E-40 1E-44 314.9 24.2 255 170-454 6-262 (262)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 3.7E-40 8.1E-45 326.8 24.0 255 172-447 7-300 (331)
57 cd05592 STKc_nPKC_theta_delta 100.0 2E-40 4.2E-45 326.7 21.6 241 176-446 1-246 (316)
58 cd05072 PTKc_Lyn Catalytic dom 100.0 4.7E-40 1E-44 314.3 23.6 251 172-452 8-261 (261)
59 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-40 3.3E-45 328.2 20.8 242 176-447 1-253 (321)
60 cd05111 PTK_HER3 Pseudokinase 100.0 7.5E-40 1.6E-44 316.6 25.1 255 173-455 10-271 (279)
61 cd05594 STKc_PKB_alpha Catalyt 100.0 7.7E-41 1.7E-45 330.8 18.6 243 176-447 1-251 (325)
62 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.1E-40 6.7E-45 334.9 23.1 258 172-454 39-399 (400)
63 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.4E-40 5.3E-45 323.9 21.5 258 170-447 5-287 (303)
64 cd05048 PTKc_Ror Catalytic Dom 100.0 6.9E-40 1.5E-44 316.9 24.4 254 173-452 8-283 (283)
65 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-40 3.9E-45 328.0 20.7 244 173-447 2-256 (324)
66 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.6E-40 1.4E-44 312.5 23.7 247 173-450 7-256 (256)
67 cd05570 STKc_PKC Catalytic dom 100.0 2.9E-40 6.2E-45 325.8 21.0 242 176-447 1-251 (318)
68 cd07862 STKc_CDK6 Catalytic do 100.0 6.4E-40 1.4E-44 318.4 22.9 257 172-447 3-286 (290)
69 cd05587 STKc_cPKC Catalytic do 100.0 3.6E-40 7.7E-45 326.0 21.3 241 172-442 2-246 (324)
70 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.5E-39 3.2E-44 310.8 24.8 250 172-451 8-259 (260)
71 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-40 8.8E-45 324.5 21.4 241 176-446 1-246 (316)
72 cd05052 PTKc_Abl Catalytic dom 100.0 1.3E-39 2.7E-44 311.9 24.2 250 174-453 10-263 (263)
73 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-40 2.5E-45 332.6 17.6 250 172-447 3-284 (350)
74 cd05069 PTKc_Yes Catalytic dom 100.0 1.6E-39 3.4E-44 310.7 24.8 250 172-451 8-259 (260)
75 cd05626 STKc_LATS2 Catalytic d 100.0 2.7E-40 5.8E-45 334.2 20.4 253 172-447 3-304 (381)
76 cd05582 STKc_RSK_N N-terminal 100.0 1.4E-40 3E-45 328.0 17.8 238 176-444 2-245 (318)
77 KOG2345|consensus 100.0 1.2E-40 2.5E-45 299.2 15.6 262 170-453 21-301 (302)
78 cd05619 STKc_nPKC_theta Cataly 100.0 5.3E-40 1.2E-44 323.7 21.9 241 176-446 1-246 (316)
79 cd05614 STKc_MSK2_N N-terminal 100.0 2.3E-40 5E-45 328.3 19.3 248 172-447 2-266 (332)
80 cd05115 PTKc_Zap-70 Catalytic 100.0 1.7E-39 3.6E-44 310.4 24.5 250 177-453 2-256 (257)
81 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 8E-40 1.7E-44 316.7 22.6 265 171-453 5-282 (283)
82 cd05068 PTKc_Frk_like Catalyti 100.0 1.5E-39 3.4E-44 310.8 24.3 250 173-452 9-261 (261)
83 cd05599 STKc_NDR_like Catalyti 100.0 2.7E-40 5.9E-45 331.9 19.8 252 172-447 3-295 (364)
84 cd05616 STKc_cPKC_beta Catalyt 100.0 4.5E-40 9.8E-45 325.1 20.9 240 173-442 3-246 (323)
85 cd05628 STKc_NDR1 Catalytic do 100.0 7.4E-40 1.6E-44 328.8 22.5 253 172-447 3-292 (363)
86 cd05060 PTKc_Syk_like Catalyti 100.0 2.3E-39 4.9E-44 309.0 24.5 250 176-453 1-256 (257)
87 PF07714 Pkinase_Tyr: Protein 100.0 3.7E-40 8E-45 315.5 18.9 248 175-449 4-259 (259)
88 cd05033 PTKc_EphR Catalytic do 100.0 2.4E-39 5.2E-44 310.4 24.5 253 173-453 7-266 (266)
89 cd05596 STKc_ROCK Catalytic do 100.0 3.1E-40 6.8E-45 332.3 19.3 249 173-447 46-303 (370)
90 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.4E-39 5.2E-44 309.4 24.4 251 172-452 8-260 (260)
91 cd05054 PTKc_VEGFR Catalytic d 100.0 4.9E-40 1.1E-44 326.8 20.2 259 171-454 8-335 (337)
92 cd05575 STKc_SGK Catalytic dom 100.0 3.3E-40 7.1E-45 326.1 18.6 238 176-443 1-242 (323)
93 cd05588 STKc_aPKC Catalytic do 100.0 7.2E-40 1.6E-44 324.5 20.9 241 176-446 1-260 (329)
94 KOG1095|consensus 100.0 2.6E-40 5.7E-45 353.2 18.9 255 174-454 696-963 (1025)
95 PHA03212 serine/threonine kina 100.0 5.5E-40 1.2E-44 332.5 20.4 250 171-447 93-375 (391)
96 cd05049 PTKc_Trk Catalytic dom 100.0 1.5E-39 3.3E-44 313.8 22.6 252 174-451 9-280 (280)
97 cd06650 PKc_MEK1 Catalytic dom 100.0 1.5E-39 3.3E-44 322.7 23.0 255 172-447 7-298 (333)
98 PTZ00267 NIMA-related protein 100.0 1.1E-39 2.3E-44 339.0 22.8 249 172-447 69-322 (478)
99 cd05618 STKc_aPKC_iota Catalyt 100.0 8.7E-40 1.9E-44 323.9 20.8 237 176-442 1-250 (329)
100 cd05084 PTKc_Fes Catalytic dom 100.0 1.4E-39 3.1E-44 309.3 21.4 248 176-451 1-252 (252)
101 cd06625 STKc_MEKK3_like Cataly 100.0 3.7E-39 8.1E-44 308.0 24.3 254 172-448 4-260 (263)
102 cd05075 PTKc_Axl Catalytic dom 100.0 3.4E-39 7.3E-44 310.1 24.1 255 174-453 3-272 (272)
103 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.7E-39 5.9E-44 308.6 23.3 247 173-450 7-256 (256)
104 cd05625 STKc_LATS1 Catalytic d 100.0 7.2E-40 1.6E-44 331.1 20.3 252 172-447 3-304 (382)
105 cd05602 STKc_SGK1 Catalytic do 100.0 9.8E-40 2.1E-44 322.9 20.9 242 176-447 1-246 (325)
106 cd05109 PTKc_HER2 Catalytic do 100.0 2.9E-39 6.3E-44 312.2 23.7 254 173-454 10-270 (279)
107 cd08228 STKc_Nek6 Catalytic do 100.0 2.5E-39 5.3E-44 310.2 22.9 258 172-452 4-265 (267)
108 KOG0589|consensus 100.0 1.9E-40 4.2E-45 326.7 15.5 250 171-448 5-258 (426)
109 PLN00034 mitogen-activated pro 100.0 1.1E-39 2.3E-44 326.4 21.1 241 175-447 79-327 (353)
110 cd05093 PTKc_TrkB Catalytic do 100.0 3.6E-39 7.9E-44 313.2 24.2 255 173-454 8-281 (288)
111 cd05062 PTKc_IGF-1R Catalytic 100.0 2.3E-39 5E-44 312.5 22.7 254 172-451 8-277 (277)
112 cd05629 STKc_NDR_like_fungal C 100.0 8E-40 1.7E-44 330.2 20.2 252 172-447 3-304 (377)
113 cd05608 STKc_GRK1 Catalytic do 100.0 2.9E-39 6.2E-44 312.8 23.3 247 178-447 1-256 (280)
114 cd05621 STKc_ROCK2 Catalytic d 100.0 5.7E-40 1.2E-44 330.3 19.0 250 172-447 45-303 (370)
115 cd07868 STKc_CDK8 Catalytic do 100.0 3.9E-39 8.5E-44 317.1 24.6 197 175-389 6-220 (317)
116 KOG0610|consensus 100.0 1.1E-39 2.3E-44 312.0 19.7 248 176-446 83-390 (459)
117 PTZ00036 glycogen synthase kin 100.0 8.1E-40 1.7E-44 336.3 20.5 254 170-447 66-350 (440)
118 PTZ00283 serine/threonine prot 100.0 1.9E-39 4.1E-44 337.8 23.4 252 171-447 33-296 (496)
119 cd05090 PTKc_Ror1 Catalytic do 100.0 3.3E-39 7.2E-44 312.4 23.1 253 173-451 8-282 (283)
120 cd05601 STKc_CRIK Catalytic do 100.0 4.7E-40 1E-44 325.8 17.5 251 172-447 3-262 (330)
121 cd05094 PTKc_TrkC Catalytic do 100.0 4.2E-39 9.2E-44 313.2 23.9 255 173-454 8-284 (291)
122 cd05035 PTKc_Axl_like Catalyti 100.0 5.8E-39 1.3E-43 308.2 24.5 256 173-453 2-273 (273)
123 cd05059 PTKc_Tec_like Catalyti 100.0 5.2E-39 1.1E-43 306.5 23.9 246 173-449 7-255 (256)
124 KOG0032|consensus 100.0 2.4E-39 5.3E-44 322.5 22.5 251 169-447 34-292 (382)
125 KOG0599|consensus 100.0 3.1E-40 6.6E-45 299.9 14.3 250 176-447 23-282 (411)
126 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.7E-39 5.8E-44 317.4 22.2 262 166-447 2-285 (309)
127 cd05045 PTKc_RET Catalytic dom 100.0 3.8E-39 8.1E-44 313.3 23.0 256 173-454 3-288 (290)
128 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-39 2.6E-44 322.4 19.8 241 176-446 1-245 (325)
129 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3E-39 6.4E-44 312.8 22.1 265 171-452 5-283 (284)
130 cd05605 STKc_GRK4_like Catalyt 100.0 2.6E-39 5.6E-44 313.9 21.6 251 172-447 2-260 (285)
131 cd05091 PTKc_Ror2 Catalytic do 100.0 2.7E-39 6E-44 312.8 21.7 253 173-451 8-282 (283)
132 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.8E-39 1.5E-43 307.4 24.1 252 175-453 10-268 (268)
133 KOG0660|consensus 100.0 4E-40 8.8E-45 311.0 15.1 263 166-447 18-309 (359)
134 cd05598 STKc_LATS Catalytic do 100.0 9.9E-40 2.1E-44 329.4 19.0 252 172-447 3-300 (376)
135 cd05603 STKc_SGK2 Catalytic do 100.0 2.6E-39 5.6E-44 319.3 21.1 238 176-443 1-242 (321)
136 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.2E-39 9.2E-44 307.5 21.8 250 173-452 9-261 (261)
137 KOG1989|consensus 100.0 1.4E-39 3.1E-44 337.8 19.9 254 173-454 40-313 (738)
138 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.6E-39 1.2E-43 320.0 23.4 259 171-454 8-341 (343)
139 cd05066 PTKc_EphR_A Catalytic 100.0 6.6E-39 1.4E-43 307.7 22.9 255 172-453 6-267 (267)
140 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.1E-39 1.1E-43 318.2 22.6 237 176-442 1-248 (327)
141 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 3E-39 6.6E-44 313.0 20.6 267 171-453 5-284 (284)
142 cd05082 PTKc_Csk Catalytic dom 100.0 8.8E-39 1.9E-43 304.7 23.4 245 172-452 8-256 (256)
143 cd08229 STKc_Nek7 Catalytic do 100.0 3.8E-39 8.3E-44 308.8 21.0 258 173-453 5-266 (267)
144 cd06646 STKc_MAP4K5 Catalytic 100.0 3.3E-39 7.2E-44 309.4 20.6 249 172-448 11-265 (267)
145 cd05615 STKc_cPKC_alpha Cataly 100.0 3.4E-39 7.4E-44 318.9 21.1 239 174-442 4-246 (323)
146 cd05607 STKc_GRK7 Catalytic do 100.0 3.1E-39 6.7E-44 312.1 20.2 246 178-447 1-249 (277)
147 cd05085 PTKc_Fer Catalytic dom 100.0 1.7E-38 3.6E-43 301.4 24.8 245 177-450 2-249 (250)
148 cd05058 PTKc_Met_Ron Catalytic 100.0 1E-38 2.2E-43 305.0 23.5 253 176-455 1-262 (262)
149 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.2E-39 1.6E-43 324.9 23.7 255 174-453 41-400 (401)
150 cd05097 PTKc_DDR_like Catalyti 100.0 7.9E-39 1.7E-43 311.9 23.1 262 171-451 6-295 (295)
151 cd05053 PTKc_FGFR Catalytic do 100.0 6.4E-39 1.4E-43 311.8 22.3 256 173-454 15-293 (293)
152 cd05098 PTKc_FGFR1 Catalytic d 100.0 7.2E-39 1.6E-43 314.0 22.6 257 172-454 20-301 (307)
153 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1E-38 2.2E-43 306.7 23.2 251 177-450 2-268 (269)
154 cd06631 STKc_YSK4 Catalytic do 100.0 9.4E-39 2E-43 305.9 22.8 255 172-447 2-261 (265)
155 cd05622 STKc_ROCK1 Catalytic d 100.0 3.7E-39 8.1E-44 324.6 21.0 249 173-447 46-303 (371)
156 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-38 3.4E-43 304.2 24.2 259 172-453 4-266 (267)
157 cd05043 PTK_Ryk Pseudokinase d 100.0 1.1E-38 2.4E-43 308.2 23.0 256 173-454 9-278 (280)
158 cd05055 PTKc_PDGFR Catalytic d 100.0 1.3E-38 2.8E-43 311.7 23.7 255 173-453 38-302 (302)
159 cd05061 PTKc_InsR Catalytic do 100.0 1.3E-38 2.7E-43 309.4 23.3 256 172-453 8-279 (288)
160 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-38 2.4E-43 303.9 22.5 251 176-451 1-257 (257)
161 cd07867 STKc_CDC2L6 Catalytic 100.0 9E-39 1.9E-43 314.3 22.4 197 175-389 6-220 (317)
162 cd05032 PTKc_InsR_like Catalyt 100.0 9.6E-39 2.1E-43 307.7 22.0 253 173-451 9-277 (277)
163 cd05056 PTKc_FAK Catalytic dom 100.0 2.2E-38 4.7E-43 304.4 24.4 253 173-454 9-267 (270)
164 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.3E-38 2.9E-43 311.6 23.2 256 173-454 18-298 (304)
165 cd05057 PTKc_EGFR_like Catalyt 100.0 3E-38 6.5E-43 305.1 25.1 254 173-454 10-270 (279)
166 PRK13184 pknD serine/threonine 100.0 5.3E-39 1.1E-43 345.3 21.7 262 171-453 3-291 (932)
167 cd05089 PTKc_Tie1 Catalytic do 100.0 1.5E-38 3.3E-43 310.2 23.1 254 172-454 4-277 (297)
168 KOG0594|consensus 100.0 1.3E-38 2.7E-43 301.6 21.7 256 176-448 17-302 (323)
169 cd05073 PTKc_Hck Catalytic dom 100.0 2.3E-38 4.9E-43 302.7 23.6 252 171-452 7-260 (260)
170 cd05597 STKc_DMPK_like Catalyt 100.0 9.6E-39 2.1E-43 316.7 21.7 253 172-447 3-265 (331)
171 cd07853 STKc_NLK Catalytic dom 100.0 8.2E-39 1.8E-43 322.3 21.5 256 173-447 3-287 (372)
172 KOG0658|consensus 100.0 6.6E-40 1.4E-44 310.1 12.5 248 176-447 30-305 (364)
173 cd08529 STKc_FA2-like Catalyti 100.0 3.4E-38 7.3E-43 300.0 24.2 246 174-447 4-252 (256)
174 cd05051 PTKc_DDR Catalytic dom 100.0 1.7E-38 3.7E-43 309.1 22.4 260 171-451 6-296 (296)
175 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.1E-38 6.8E-43 304.8 24.0 252 174-451 10-277 (277)
176 cd05627 STKc_NDR2 Catalytic do 100.0 2.2E-39 4.8E-44 325.0 16.6 251 172-446 3-291 (360)
177 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-38 2.3E-43 319.9 21.3 255 170-447 21-314 (359)
178 PF00069 Pkinase: Protein kina 100.0 4.8E-39 1E-43 306.3 17.8 251 172-447 1-256 (260)
179 cd06651 STKc_MEKK3 Catalytic d 100.0 3.1E-38 6.8E-43 302.8 23.5 251 173-447 5-260 (266)
180 cd00192 PTKc Catalytic domain 100.0 4.2E-38 9.2E-43 299.5 24.2 249 176-450 1-262 (262)
181 cd06628 STKc_MAPKKK_Byr2_like 100.0 4E-38 8.7E-43 301.8 24.1 256 172-447 2-263 (267)
182 cd05083 PTKc_Chk Catalytic dom 100.0 1E-38 2.2E-43 303.9 19.9 244 172-451 8-253 (254)
183 cd05623 STKc_MRCK_alpha Cataly 100.0 1.3E-38 2.9E-43 315.8 21.2 253 172-447 3-265 (332)
184 cd07863 STKc_CDK4 Catalytic do 100.0 2.8E-38 6E-43 306.4 22.9 257 172-447 2-284 (288)
185 cd05047 PTKc_Tie Catalytic dom 100.0 3.8E-38 8.2E-43 303.0 23.6 248 177-453 2-269 (270)
186 cd05034 PTKc_Src_like Catalyti 100.0 4.6E-38 1E-42 300.3 24.1 251 172-452 8-261 (261)
187 cd05586 STKc_Sck1_like Catalyt 100.0 5.3E-39 1.1E-43 318.3 18.1 241 178-447 1-252 (330)
188 cd05092 PTKc_TrkA Catalytic do 100.0 3.2E-38 6.9E-43 305.3 23.1 252 173-451 8-280 (280)
189 KOG0196|consensus 100.0 1.9E-40 4E-45 337.1 7.7 276 151-455 607-894 (996)
190 cd06645 STKc_MAP4K3 Catalytic 100.0 1.7E-38 3.7E-43 304.5 20.9 246 174-447 13-264 (267)
191 cd07861 STKc_CDK1_euk Catalyti 100.0 2.5E-38 5.5E-43 306.1 22.1 258 172-447 2-281 (285)
192 cd05065 PTKc_EphR_B Catalytic 100.0 4E-38 8.7E-43 302.4 23.2 255 172-453 6-269 (269)
193 cd05632 STKc_GRK5 Catalytic do 100.0 2.5E-38 5.4E-43 307.0 22.0 250 173-447 3-260 (285)
194 cd05042 PTKc_Aatyk Catalytic d 100.0 2.9E-38 6.2E-43 303.4 22.1 251 177-450 2-268 (269)
195 cd05050 PTKc_Musk Catalytic do 100.0 3E-38 6.6E-43 306.4 22.4 253 173-451 8-288 (288)
196 cd05088 PTKc_Tie2 Catalytic do 100.0 3.2E-38 6.8E-43 309.1 22.6 253 173-454 10-282 (303)
197 cd05630 STKc_GRK6 Catalytic do 100.0 2.5E-38 5.4E-43 307.0 21.7 250 173-447 3-260 (285)
198 cd05110 PTKc_HER4 Catalytic do 100.0 4E-38 8.7E-43 308.2 23.2 254 173-454 10-270 (303)
199 cd08219 STKc_Nek3 Catalytic do 100.0 2.7E-38 5.9E-43 301.0 21.4 248 172-448 2-252 (255)
200 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.8E-38 8.2E-43 307.9 22.6 262 166-447 2-285 (301)
201 cd05095 PTKc_DDR2 Catalytic do 100.0 3.8E-38 8.3E-43 307.2 22.5 259 172-451 7-296 (296)
202 cd05039 PTKc_Csk_like Catalyti 100.0 8.8E-38 1.9E-42 297.7 24.2 246 172-452 8-256 (256)
203 cd07878 STKc_p38beta_MAPK11 Ca 100.0 4.6E-38 1E-42 313.2 23.1 253 171-447 16-297 (343)
204 cd06652 STKc_MEKK2 Catalytic d 100.0 8.4E-38 1.8E-42 299.5 24.1 252 172-447 4-260 (265)
205 PTZ00284 protein kinase; Provi 100.0 2.5E-38 5.5E-43 328.1 22.0 251 172-447 131-437 (467)
206 cd05099 PTKc_FGFR4 Catalytic d 100.0 6.6E-38 1.4E-42 308.3 23.9 255 173-453 15-294 (314)
207 cd05624 STKc_MRCK_beta Catalyt 100.0 1.7E-38 3.7E-43 314.9 19.8 251 172-447 3-265 (331)
208 PHA03211 serine/threonine kina 100.0 1.1E-38 2.5E-43 327.7 19.1 251 172-447 171-454 (461)
209 cd06615 PKc_MEK Catalytic doma 100.0 5.9E-38 1.3E-42 307.8 23.3 256 172-448 3-287 (308)
210 cd05041 PTKc_Fes_like Catalyti 100.0 5.8E-38 1.2E-42 297.9 22.4 248 176-451 1-251 (251)
211 PHA03207 serine/threonine kina 100.0 1.9E-38 4.2E-43 321.8 20.4 251 172-447 94-374 (392)
212 cd05044 PTKc_c-ros Catalytic d 100.0 2.6E-38 5.7E-43 303.4 20.2 250 176-451 1-269 (269)
213 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.8E-38 1.3E-42 311.4 23.3 257 172-454 14-295 (334)
214 cd05112 PTKc_Itk Catalytic dom 100.0 8.6E-38 1.9E-42 297.6 23.5 247 173-450 7-256 (256)
215 cd08227 PK_STRAD_alpha Pseudok 100.0 4.8E-38 1.1E-42 311.1 22.6 258 174-447 2-306 (327)
216 cd06624 STKc_ASK Catalytic dom 100.0 5.4E-38 1.2E-42 301.3 22.2 254 159-447 3-264 (268)
217 cd06644 STKc_STK10_LOK Catalyt 100.0 9.1E-38 2E-42 303.8 24.0 255 164-447 6-268 (292)
218 cd07875 STKc_JNK1 Catalytic do 100.0 3.4E-38 7.4E-43 316.8 21.6 254 171-447 25-317 (364)
219 cd06637 STKc_TNIK Catalytic do 100.0 3.5E-38 7.5E-43 303.0 20.6 245 173-447 9-268 (272)
220 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-37 2.4E-42 296.8 23.9 248 172-447 2-253 (257)
221 cd05086 PTKc_Aatyk2 Catalytic 100.0 9.1E-38 2E-42 300.2 23.4 252 177-450 2-267 (268)
222 KOG0577|consensus 100.0 1.9E-39 4.1E-44 320.7 11.8 239 176-447 32-277 (948)
223 cd06643 STKc_SLK Catalytic dom 100.0 5.9E-38 1.3E-42 303.5 22.1 247 172-447 7-261 (282)
224 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.9E-38 1.5E-42 300.2 22.4 237 177-450 2-262 (262)
225 KOG0690|consensus 100.0 1.9E-39 4E-44 301.0 11.0 235 176-440 174-411 (516)
226 KOG4250|consensus 100.0 7.5E-39 1.6E-43 324.1 16.2 265 173-455 16-313 (732)
227 cd06654 STKc_PAK1 Catalytic do 100.0 1E-37 2.2E-42 304.5 23.7 246 171-447 21-269 (296)
228 cd07874 STKc_JNK3 Catalytic do 100.0 2.1E-38 4.6E-43 317.2 19.3 254 171-447 18-310 (355)
229 KOG0574|consensus 100.0 3.2E-40 7E-45 303.2 5.5 241 176-447 39-282 (502)
230 cd06632 STKc_MEKK1_plant Catal 100.0 1.2E-37 2.6E-42 296.3 23.4 249 172-447 2-254 (258)
231 KOG0033|consensus 100.0 3.7E-40 8E-45 295.2 5.7 248 172-447 13-266 (355)
232 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.2E-38 2E-42 297.5 22.2 237 176-450 1-259 (259)
233 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 4.8E-38 1E-42 304.6 20.6 255 173-448 8-266 (284)
234 KOG1094|consensus 100.0 1.4E-38 3E-43 314.5 16.8 262 173-455 541-807 (807)
235 cd05580 STKc_PKA Catalytic dom 100.0 8.1E-38 1.8E-42 304.0 21.9 242 172-446 3-252 (290)
236 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 8.3E-38 1.8E-42 301.7 21.7 237 177-450 2-274 (274)
237 cd06619 PKc_MKK5 Catalytic dom 100.0 5E-38 1.1E-42 303.7 20.2 246 173-447 4-252 (279)
238 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-37 2.5E-42 301.9 22.5 250 172-447 3-261 (286)
239 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.6E-37 3.5E-42 298.5 22.9 261 172-447 3-268 (272)
240 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-37 2.7E-42 301.2 22.0 257 172-447 3-282 (286)
241 cd06638 STKc_myosinIIIA Cataly 100.0 1.2E-37 2.6E-42 301.6 21.7 260 155-448 9-283 (286)
242 cd06609 STKc_MST3_like Catalyt 100.0 2.1E-37 4.5E-42 298.3 23.0 245 172-447 3-250 (274)
243 PHA03209 serine/threonine kina 100.0 5.4E-38 1.2E-42 314.6 19.6 186 172-385 68-256 (357)
244 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 4.5E-38 9.7E-43 300.5 18.2 237 177-450 2-258 (258)
245 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2E-37 4.3E-42 296.4 22.5 256 172-447 3-263 (267)
246 cd06607 STKc_TAO Catalytic dom 100.0 3.5E-37 7.6E-42 302.1 24.8 257 159-447 4-266 (307)
247 cd06612 STKc_MST1_2 Catalytic 100.0 2.1E-37 4.5E-42 294.6 22.5 245 172-447 5-252 (256)
248 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-37 4.1E-42 298.5 22.3 253 173-451 8-275 (275)
249 KOG0584|consensus 100.0 9E-39 2E-43 319.8 13.4 245 173-447 43-295 (632)
250 cd08221 STKc_Nek9 Catalytic do 100.0 1.7E-37 3.8E-42 295.5 21.8 249 172-448 2-253 (256)
251 cd06613 STKc_MAP4K3_like Catal 100.0 4.3E-37 9.3E-42 293.4 23.6 249 172-447 5-259 (262)
252 PTZ00266 NIMA-related protein 100.0 1.1E-37 2.4E-42 336.3 21.9 251 171-447 14-294 (1021)
253 cd07839 STKc_CDK5 Catalytic do 100.0 1.9E-37 4.2E-42 299.9 21.4 257 172-447 2-280 (284)
254 KOG0579|consensus 100.0 7.9E-39 1.7E-43 318.0 11.8 256 163-447 25-288 (1187)
255 cd06611 STKc_SLK_like Catalyti 100.0 1.6E-37 3.4E-42 300.1 20.5 247 172-447 7-261 (280)
256 cd07860 STKc_CDK2_3 Catalytic 100.0 2.3E-37 4.9E-42 299.4 21.6 257 173-447 3-280 (284)
257 cd06639 STKc_myosinIIIB Cataly 100.0 1.6E-37 3.5E-42 301.8 20.6 260 154-447 12-286 (291)
258 cd08528 STKc_Nek10 Catalytic d 100.0 3E-37 6.6E-42 296.2 22.2 261 173-451 3-269 (269)
259 cd06655 STKc_PAK2 Catalytic do 100.0 5.7E-37 1.2E-41 299.2 24.4 246 171-447 20-268 (296)
260 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.5E-37 3.2E-42 300.9 20.1 257 172-447 3-282 (286)
261 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.8E-37 3.8E-42 299.6 20.3 265 172-452 6-283 (284)
262 cd07832 STKc_CCRK Catalytic do 100.0 3.2E-37 7E-42 298.3 22.1 258 172-447 2-281 (286)
263 cd06640 STKc_MST4 Catalytic do 100.0 3.5E-37 7.7E-42 297.4 22.3 244 173-448 7-253 (277)
264 KOG4279|consensus 100.0 1.9E-38 4.1E-43 318.2 13.7 243 176-447 581-831 (1226)
265 cd06656 STKc_PAK3 Catalytic do 100.0 2.9E-37 6.2E-42 301.4 21.8 245 172-447 21-268 (297)
266 cd07841 STKc_CDK7 Catalytic do 100.0 3.8E-37 8.3E-42 300.1 22.3 260 172-447 2-281 (298)
267 KOG4257|consensus 100.0 6.5E-38 1.4E-42 311.4 17.0 252 173-453 392-650 (974)
268 cd06630 STKc_MEKK1 Catalytic d 100.0 3.8E-37 8.3E-42 295.0 21.9 257 172-447 2-263 (268)
269 cd05574 STKc_phototropin_like 100.0 3.7E-37 8E-42 303.0 22.4 253 172-447 3-288 (316)
270 cd08217 STKc_Nek2 Catalytic do 100.0 6.6E-37 1.4E-41 292.0 23.4 249 172-447 2-261 (265)
271 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.5E-37 3.3E-42 299.8 19.2 241 175-447 9-252 (277)
272 cd05609 STKc_MAST Catalytic do 100.0 3.1E-37 6.8E-42 302.1 21.4 255 173-451 4-273 (305)
273 cd06659 STKc_PAK6 Catalytic do 100.0 4.9E-37 1.1E-41 299.8 22.3 244 173-447 24-270 (297)
274 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.3E-37 9.4E-42 297.3 21.7 257 155-447 7-278 (282)
275 KOG4717|consensus 100.0 8.5E-38 1.8E-42 304.7 16.7 245 172-447 20-269 (864)
276 KOG4278|consensus 100.0 5.9E-38 1.3E-42 311.3 15.7 250 175-454 272-525 (1157)
277 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.2E-36 2.6E-41 292.5 23.8 255 173-452 2-272 (273)
278 cd06917 STKc_NAK1_like Catalyt 100.0 5.3E-37 1.1E-41 295.7 21.3 245 172-447 3-254 (277)
279 cd06626 STKc_MEKK4 Catalytic d 100.0 1.1E-36 2.4E-41 290.9 23.2 251 172-447 2-260 (264)
280 smart00219 TyrKc Tyrosine kina 100.0 1E-36 2.2E-41 289.7 22.9 248 174-449 3-258 (258)
281 cd08218 STKc_Nek1 Catalytic do 100.0 6.1E-37 1.3E-41 291.7 21.3 248 172-447 2-252 (256)
282 KOG0199|consensus 100.0 5.9E-38 1.3E-42 315.2 14.6 247 176-448 116-368 (1039)
283 cd07844 STKc_PCTAIRE_like Cata 100.0 1.1E-36 2.4E-41 295.8 23.2 258 170-447 5-287 (291)
284 cd06635 STKc_TAO1 Catalytic do 100.0 2.3E-36 5E-41 297.8 25.7 246 172-449 27-278 (317)
285 KOG0586|consensus 100.0 1.3E-37 2.8E-42 311.2 16.7 249 167-447 53-305 (596)
286 cd06617 PKc_MKK3_6 Catalytic d 100.0 4.1E-37 9E-42 297.3 19.6 247 173-447 4-260 (283)
287 KOG0667|consensus 100.0 2.1E-37 4.6E-42 312.5 18.0 253 171-447 187-501 (586)
288 cd08220 STKc_Nek8 Catalytic do 100.0 1.7E-36 3.7E-41 288.2 23.3 246 172-447 2-252 (256)
289 cd07836 STKc_Pho85 Catalytic d 100.0 1.2E-36 2.6E-41 294.2 22.6 257 172-447 2-280 (284)
290 cd06608 STKc_myosinIII_like Ca 100.0 6.9E-37 1.5E-41 293.7 20.3 248 172-447 8-271 (275)
291 cd07849 STKc_ERK1_2_like Catal 100.0 5.7E-37 1.2E-41 304.5 20.3 259 171-448 6-292 (336)
292 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-36 2.6E-41 294.3 22.0 256 173-447 2-279 (283)
293 cd05633 STKc_GRK3 Catalytic do 100.0 9.4E-37 2E-41 295.1 21.1 242 177-447 1-254 (279)
294 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.4E-36 5.3E-41 289.4 23.7 252 172-447 4-260 (264)
295 cd05579 STKc_MAST_like Catalyt 100.0 8.9E-37 1.9E-41 291.1 20.5 248 178-450 1-256 (265)
296 cd07833 STKc_CDKL Catalytic do 100.0 9.6E-37 2.1E-41 295.3 21.1 258 172-447 3-284 (288)
297 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.9E-36 4.1E-41 294.3 23.0 257 171-447 6-287 (291)
298 cd06658 STKc_PAK5 Catalytic do 100.0 8.2E-37 1.8E-41 297.5 20.4 241 176-447 28-271 (292)
299 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.2E-36 2.7E-41 295.2 21.6 252 174-447 5-265 (287)
300 cd05572 STKc_cGK_PKG Catalytic 100.0 1.9E-36 4.1E-41 289.5 22.4 241 178-447 1-251 (262)
301 cd05606 STKc_beta_ARK Catalyti 100.0 2.6E-36 5.7E-41 291.8 23.6 242 177-447 1-254 (278)
302 KOG4645|consensus 100.0 1E-38 2.2E-43 339.5 7.1 248 172-447 1237-1493(1509)
303 cd06641 STKc_MST3 Catalytic do 100.0 2.4E-36 5.1E-41 291.6 23.0 244 172-447 6-252 (277)
304 cd05578 STKc_Yank1 Catalytic d 100.0 8.1E-37 1.8E-41 291.4 19.4 247 172-446 2-253 (258)
305 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-36 3.5E-41 295.1 21.6 256 173-447 8-289 (293)
306 cd07837 STKc_CdkB_plant Cataly 100.0 1.9E-36 4.1E-41 294.6 21.9 259 172-447 3-290 (295)
307 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-36 2.3E-41 299.1 19.4 263 172-447 2-312 (316)
308 KOG0983|consensus 100.0 5.5E-37 1.2E-41 278.8 15.9 243 176-447 98-348 (391)
309 cd07865 STKc_CDK9 Catalytic do 100.0 3E-36 6.4E-41 295.0 22.1 260 172-447 14-306 (310)
310 cd05611 STKc_Rim15_like Cataly 100.0 2.3E-36 5.1E-41 288.5 20.9 244 176-449 2-249 (260)
311 cd05577 STKc_GRK Catalytic dom 100.0 3.1E-36 6.6E-41 290.8 21.6 245 178-447 1-253 (277)
312 cd07845 STKc_CDK10 Catalytic d 100.0 3.5E-36 7.7E-41 295.1 22.2 257 172-447 9-289 (309)
313 cd07855 STKc_ERK5 Catalytic do 100.0 2.1E-36 4.6E-41 300.2 20.4 259 172-447 7-293 (334)
314 KOG0596|consensus 100.0 4.9E-37 1.1E-41 302.3 15.6 248 171-447 362-626 (677)
315 cd07831 STKc_MOK Catalytic dom 100.0 5.8E-36 1.3E-40 288.9 22.6 254 172-447 1-278 (282)
316 cd06648 STKc_PAK_II Catalytic 100.0 6.2E-36 1.4E-40 290.2 22.8 241 176-447 25-268 (285)
317 cd08226 PK_STRAD_beta Pseudoki 100.0 7.9E-36 1.7E-40 295.4 24.0 258 176-447 4-307 (328)
318 cd08225 STKc_Nek5 Catalytic do 100.0 3.6E-36 7.9E-41 286.2 20.8 248 172-447 2-253 (257)
319 cd06605 PKc_MAPKK Catalytic do 100.0 2.2E-36 4.8E-41 289.2 19.0 247 173-447 4-256 (265)
320 cd06616 PKc_MKK4 Catalytic dom 100.0 3.5E-36 7.7E-41 291.8 20.6 248 176-447 10-266 (288)
321 cd06647 STKc_PAK_I Catalytic d 100.0 5.8E-36 1.2E-40 291.7 22.0 244 173-447 22-268 (293)
322 cd07864 STKc_CDK12 Catalytic d 100.0 6E-36 1.3E-40 292.1 22.1 257 173-447 10-298 (302)
323 cd05122 PKc_STE Catalytic doma 100.0 1.4E-35 3E-40 280.1 23.1 246 172-447 2-250 (253)
324 cd06633 STKc_TAO3 Catalytic do 100.0 1.2E-35 2.7E-40 292.1 23.5 240 176-447 27-272 (313)
325 cd07850 STKc_JNK Catalytic dom 100.0 5.4E-36 1.2E-40 299.6 21.1 254 171-447 17-310 (353)
326 cd05613 STKc_MSK1_N N-terminal 100.0 9.1E-36 2E-40 289.4 22.0 252 172-447 2-267 (290)
327 PLN00113 leucine-rich repeat r 100.0 1.1E-35 2.3E-40 334.4 26.0 248 176-454 696-953 (968)
328 KOG3653|consensus 100.0 1.3E-36 2.8E-41 294.9 15.8 257 175-453 215-504 (534)
329 cd06623 PKc_MAPKK_plant_like C 100.0 7.4E-36 1.6E-40 285.0 20.9 249 173-447 4-255 (264)
330 cd05581 STKc_PDK1 Catalytic do 100.0 5.7E-36 1.2E-40 288.3 19.9 249 172-447 3-276 (280)
331 cd07834 STKc_MAPK Catalytic do 100.0 1E-35 2.3E-40 294.4 22.2 259 172-447 2-288 (330)
332 cd06614 STKc_PAK Catalytic dom 100.0 2.5E-35 5.5E-40 285.7 24.4 246 172-447 21-269 (286)
333 cd08216 PK_STRAD Pseudokinase 100.0 1.5E-35 3.2E-40 291.2 23.0 259 174-447 6-294 (314)
334 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-35 3.1E-40 286.5 22.5 254 173-447 2-279 (283)
335 cd07840 STKc_CDK9_like Catalyt 100.0 1.4E-35 3E-40 286.6 22.1 257 173-447 2-283 (287)
336 cd05583 STKc_MSK_N N-terminal 100.0 6.7E-36 1.5E-40 290.0 19.9 256 172-451 2-266 (288)
337 PLN00009 cyclin-dependent kina 100.0 7.6E-36 1.6E-40 290.5 20.1 258 172-447 4-283 (294)
338 PHA02882 putative serine/threo 100.0 1.6E-35 3.4E-40 288.8 22.2 266 171-450 13-294 (294)
339 cd07866 STKc_BUR1 Catalytic do 100.0 1.1E-35 2.4E-40 291.1 21.1 260 172-447 10-307 (311)
340 cd05118 STKc_CMGC Catalytic do 100.0 1.6E-35 3.5E-40 285.8 21.8 256 173-447 2-279 (283)
341 KOG0696|consensus 100.0 1.3E-36 2.8E-41 289.8 13.7 235 176-440 355-593 (683)
342 cd06627 STKc_Cdc7_like Catalyt 100.0 2.3E-35 5.1E-40 279.7 22.4 246 172-447 2-250 (254)
343 KOG0986|consensus 100.0 4.5E-37 9.9E-42 296.2 10.4 242 176-442 191-435 (591)
344 cd06634 STKc_TAO2 Catalytic do 100.0 1.7E-35 3.6E-40 290.5 21.7 241 176-448 21-267 (308)
345 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-35 2.4E-40 295.5 20.7 256 172-448 7-291 (337)
346 cd07852 STKc_MAPK15 Catalytic 100.0 1.2E-35 2.7E-40 295.0 20.9 256 173-447 10-294 (337)
347 cd06618 PKc_MKK7 Catalytic dom 100.0 9.9E-36 2.2E-40 290.2 19.7 246 173-447 18-272 (296)
348 cd08530 STKc_CNK2-like Catalyt 100.0 2.7E-35 5.8E-40 279.9 22.1 247 172-447 2-252 (256)
349 cd06606 STKc_MAPKKK Catalytic 100.0 2.9E-35 6.2E-40 279.1 22.2 249 173-447 3-256 (260)
350 cd06657 STKc_PAK4 Catalytic do 100.0 1.8E-35 4E-40 288.1 20.9 241 176-447 26-269 (292)
351 cd05123 STKc_AGC Catalytic dom 100.0 3.8E-35 8.2E-40 278.0 22.4 237 178-444 1-240 (250)
352 PTZ00024 cyclin-dependent prot 100.0 2.8E-35 6.1E-40 292.2 22.2 268 174-447 13-312 (335)
353 PHA03390 pk1 serine/threonine- 100.0 5.4E-35 1.2E-39 280.9 23.4 232 178-447 24-261 (267)
354 cd08215 STKc_Nek Catalytic dom 100.0 4.9E-35 1.1E-39 277.7 22.8 249 172-447 2-254 (258)
355 cd07838 STKc_CDK4_6_like Catal 100.0 5.1E-35 1.1E-39 282.9 22.8 256 173-447 2-283 (287)
356 cd07854 STKc_MAPK4_6 Catalytic 100.0 4E-35 8.7E-40 292.1 22.3 257 171-447 6-299 (342)
357 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-35 5.3E-40 293.7 20.7 265 156-447 3-296 (342)
358 PHA03210 serine/threonine kina 100.0 8.9E-36 1.9E-40 311.0 18.3 272 171-447 149-453 (501)
359 KOG2052|consensus 100.0 1.5E-35 3.2E-40 285.6 18.3 259 174-453 215-504 (513)
360 cd08222 STKc_Nek11 Catalytic d 100.0 6E-35 1.3E-39 278.8 21.8 251 172-447 2-256 (260)
361 KOG1006|consensus 100.0 4.4E-37 9.5E-42 278.5 6.6 262 150-447 57-326 (361)
362 cd07880 STKc_p38gamma_MAPK12 C 100.0 3.6E-35 7.7E-40 292.6 20.9 251 172-447 17-297 (343)
363 KOG0612|consensus 100.0 2.2E-36 4.8E-41 318.1 12.4 245 174-446 79-336 (1317)
364 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.7E-35 8E-40 290.7 20.3 252 172-447 12-287 (328)
365 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.9E-35 1.3E-39 291.2 21.5 260 158-447 11-299 (345)
366 cd07851 STKc_p38 Catalytic dom 100.0 2.8E-35 6E-40 293.4 18.4 252 172-447 17-297 (343)
367 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-34 2.6E-39 279.6 21.9 256 173-447 2-278 (282)
368 cd07857 STKc_MPK1 Catalytic do 100.0 9.2E-35 2E-39 288.2 20.0 259 172-447 2-291 (332)
369 KOG0614|consensus 100.0 3.3E-36 7.1E-41 293.4 8.8 239 174-441 424-665 (732)
370 KOG0666|consensus 100.0 1E-35 2.2E-40 274.9 10.7 203 172-388 26-243 (438)
371 KOG0607|consensus 100.0 9E-35 2E-39 269.4 15.8 258 153-447 72-360 (463)
372 KOG1035|consensus 100.0 2.8E-35 6.2E-40 312.0 14.1 260 154-447 469-870 (1351)
373 cd05610 STKc_MASTL Catalytic d 100.0 2.5E-34 5.5E-39 309.2 21.0 145 172-331 6-152 (669)
374 KOG1025|consensus 100.0 4.9E-35 1.1E-39 298.7 13.8 253 175-455 701-960 (1177)
375 cd05576 STKc_RPK118_like Catal 100.0 5E-34 1.1E-38 269.3 19.0 218 181-443 4-224 (237)
376 KOG0604|consensus 100.0 1E-34 2.2E-39 267.2 12.8 239 176-447 68-321 (400)
377 KOG1151|consensus 100.0 3.9E-35 8.4E-40 281.8 9.0 281 151-446 436-739 (775)
378 KOG0200|consensus 100.0 7.9E-34 1.7E-38 301.4 19.6 253 174-453 300-580 (609)
379 KOG4236|consensus 100.0 9.8E-35 2.1E-39 284.0 10.0 242 176-446 570-817 (888)
380 KOG0669|consensus 100.0 2.2E-35 4.7E-40 265.6 4.8 259 173-447 20-314 (376)
381 KOG0662|consensus 100.0 1.9E-33 4.2E-38 241.4 15.9 254 175-447 7-282 (292)
382 PLN03225 Serine/threonine-prot 100.0 5.8E-33 1.3E-37 292.1 21.1 256 170-447 132-449 (566)
383 KOG0603|consensus 100.0 1.9E-33 4.1E-38 282.8 16.1 234 171-447 323-562 (612)
384 KOG0587|consensus 100.0 5E-33 1.1E-37 286.9 17.9 249 170-447 19-281 (953)
385 smart00220 S_TKc Serine/Threon 100.0 8.5E-32 1.8E-36 252.3 21.8 236 182-447 1-240 (244)
386 PLN03224 probable serine/threo 100.0 1.2E-31 2.5E-36 276.1 19.8 272 172-447 147-499 (507)
387 KOG0671|consensus 100.0 1.3E-32 2.9E-37 261.0 11.3 254 169-447 88-405 (415)
388 cd08308 Death_Tube Death domai 100.0 8.2E-33 1.8E-37 225.0 8.3 116 10-127 1-119 (125)
389 KOG0695|consensus 100.0 4.2E-32 9.1E-37 253.1 14.0 237 174-440 254-502 (593)
390 KOG0608|consensus 100.0 2E-32 4.4E-37 272.7 12.6 207 174-395 633-881 (1034)
391 KOG1027|consensus 100.0 9.4E-33 2E-37 283.6 9.4 241 176-447 515-766 (903)
392 KOG0984|consensus 100.0 8E-32 1.7E-36 236.2 11.4 197 176-390 52-257 (282)
393 KOG0576|consensus 100.0 9.5E-32 2.1E-36 269.9 6.9 253 167-447 12-270 (829)
394 KOG1024|consensus 100.0 8.8E-31 1.9E-35 248.7 12.5 254 173-452 287-555 (563)
395 KOG1152|consensus 100.0 3.6E-31 7.8E-36 261.9 9.6 200 173-387 564-771 (772)
396 KOG0664|consensus 100.0 9.8E-32 2.1E-36 244.5 5.0 253 176-447 59-342 (449)
397 cd00180 PKc Catalytic domain o 100.0 5.6E-29 1.2E-33 227.2 21.4 209 178-448 1-214 (215)
398 cd08793 Death_IRAK4 Death doma 100.0 2.9E-30 6.2E-35 201.5 7.7 98 11-117 1-98 (100)
399 KOG0670|consensus 100.0 6.3E-30 1.4E-34 250.2 11.6 254 172-447 434-745 (752)
400 KOG0668|consensus 100.0 4.1E-29 8.9E-34 222.3 12.5 258 162-447 30-321 (338)
401 smart00221 STYKc Protein kinas 100.0 1E-27 2.2E-32 222.7 19.7 197 173-387 2-202 (225)
402 KOG0665|consensus 100.0 6.5E-29 1.4E-33 231.0 11.3 253 171-447 18-309 (369)
403 KOG1345|consensus 100.0 1.8E-28 3.8E-33 223.3 10.6 241 174-449 28-285 (378)
404 KOG1290|consensus 99.9 7.4E-27 1.6E-31 227.7 18.4 129 171-316 79-221 (590)
405 KOG1167|consensus 99.9 8.8E-28 1.9E-32 231.2 11.6 253 172-447 38-380 (418)
406 PLN00181 protein SPA1-RELATED; 99.9 5.7E-27 1.2E-31 257.8 11.7 197 233-447 26-264 (793)
407 smart00750 KIND kinase non-cat 99.9 1.2E-25 2.6E-30 201.9 15.5 166 263-453 1-170 (176)
408 cd08307 Death_Pelle Death doma 99.9 2E-26 4.4E-31 181.4 7.5 88 11-113 1-88 (97)
409 PRK09188 serine/threonine prot 99.9 3.8E-25 8.2E-30 219.0 14.2 167 172-360 20-194 (365)
410 KOG1164|consensus 99.9 1.5E-23 3.2E-28 207.1 21.4 259 171-453 19-298 (322)
411 KOG1165|consensus 99.9 1.3E-23 2.8E-28 196.6 18.3 257 169-454 27-301 (449)
412 cd08309 Death_IRAK Death domai 99.9 1.1E-24 2.4E-29 173.6 8.4 92 11-111 1-94 (95)
413 cd08795 Death_IRAK2 Death doma 99.9 1E-24 2.2E-29 166.5 7.4 86 12-111 2-87 (88)
414 COG0515 SPS1 Serine/threonine 99.9 9.5E-23 2.1E-27 197.7 23.1 257 173-447 3-274 (384)
415 cd08796 Death_IRAK-M Death dom 99.9 2.8E-24 6E-29 165.9 7.4 85 11-111 1-88 (89)
416 KOG1163|consensus 99.9 3.4E-23 7.4E-28 186.0 14.9 253 171-450 16-282 (341)
417 KOG0195|consensus 99.9 3.7E-24 8.1E-29 195.1 8.1 247 176-453 196-447 (448)
418 cd05147 RIO1_euk RIO kinase fa 99.9 8.7E-23 1.9E-27 185.8 13.9 152 175-333 2-167 (190)
419 KOG0590|consensus 99.9 1.5E-23 3.2E-28 220.6 8.8 258 173-447 321-584 (601)
420 PF14786 Death_2: Tube Death d 99.9 1.3E-23 2.8E-28 170.7 4.9 118 8-128 2-132 (137)
421 KOG1240|consensus 99.9 2.9E-23 6.4E-28 219.0 5.7 243 176-448 29-291 (1431)
422 cd05145 RIO1_like RIO kinase f 99.9 2.6E-21 5.7E-26 176.4 14.0 154 175-334 2-168 (190)
423 PRK12274 serine/threonine prot 99.9 1.3E-21 2.9E-26 177.3 11.4 190 175-389 7-211 (218)
424 PRK10359 lipopolysaccharide co 99.9 1.4E-21 2.9E-26 180.8 8.8 176 171-379 32-216 (232)
425 KOG0603|consensus 99.8 2.3E-22 4.9E-27 203.1 3.5 225 178-442 2-232 (612)
426 cd08794 Death_IRAK1 Death doma 99.8 1.6E-21 3.4E-26 143.2 6.8 81 11-111 1-83 (84)
427 PF14531 Kinase-like: Kinase-l 99.8 6.5E-21 1.4E-25 181.4 12.7 232 173-439 15-288 (288)
428 KOG1023|consensus 99.8 3.9E-20 8.5E-25 186.8 10.9 211 233-454 1-226 (484)
429 smart00090 RIO RIO-like kinase 99.8 1.1E-19 2.3E-24 171.2 12.6 157 169-334 27-199 (237)
430 PRK10345 hypothetical protein; 99.8 5.7E-19 1.2E-23 162.5 13.4 132 176-330 8-157 (210)
431 KOG1166|consensus 99.8 6.1E-19 1.3E-23 189.8 14.7 188 173-383 701-901 (974)
432 cd05144 RIO2_C RIO kinase fami 99.8 7.1E-19 1.5E-23 161.4 13.2 149 172-334 17-176 (198)
433 PRK14879 serine/threonine prot 99.8 1.6E-18 3.4E-23 160.5 14.9 141 176-332 2-143 (211)
434 KOG4158|consensus 99.8 1.7E-18 3.7E-23 165.9 13.5 196 237-449 274-511 (598)
435 TIGR03724 arch_bud32 Kae1-asso 99.8 3.2E-18 7E-23 157.0 13.3 137 177-332 1-138 (199)
436 PRK09605 bifunctional UGMP fam 99.8 5.7E-18 1.2E-22 178.4 14.6 141 173-333 336-477 (535)
437 KOG0606|consensus 99.7 3.3E-18 7.1E-23 181.1 8.6 202 176-440 89-304 (1205)
438 PRK01723 3-deoxy-D-manno-octul 99.7 1.9E-16 4E-21 149.4 12.7 147 176-333 37-192 (239)
439 KOG1033|consensus 99.7 7.1E-18 1.5E-22 167.7 2.9 172 252-445 330-509 (516)
440 cd05119 RIO RIO kinase family, 99.7 2.6E-16 5.6E-21 142.8 12.8 150 175-334 2-165 (187)
441 cd05120 APH_ChoK_like Aminogly 99.7 9.7E-16 2.1E-20 132.7 12.2 132 176-333 4-139 (155)
442 KOG0590|consensus 99.6 3.2E-17 6.9E-22 172.9 1.3 253 173-446 23-284 (601)
443 TIGR01982 UbiB 2-polyprenylphe 99.6 2.1E-14 4.5E-19 147.0 14.4 152 176-334 123-308 (437)
444 KOG1266|consensus 99.5 2.1E-13 4.6E-18 128.4 9.1 202 231-447 119-330 (458)
445 cd05151 ChoK Choline Kinase (C 99.4 3.9E-13 8.4E-18 119.7 10.0 128 176-332 4-136 (170)
446 KOG0601|consensus 99.4 2.7E-13 5.8E-18 137.6 8.6 246 176-447 120-378 (524)
447 PRK04750 ubiB putative ubiquin 99.4 4.8E-13 1E-17 138.8 10.6 151 176-335 125-316 (537)
448 cd05146 RIO3_euk RIO kinase fa 99.3 1.5E-11 3.2E-16 111.6 13.7 148 176-333 3-174 (197)
449 cd08781 Death_UNC5-like Death 99.3 3.5E-12 7.6E-17 98.9 7.0 78 16-111 1-82 (83)
450 KOG3087|consensus 99.3 6.4E-11 1.4E-15 103.7 12.9 150 176-334 13-167 (229)
451 COG4248 Uncharacterized protei 99.3 3E-10 6.6E-15 110.8 18.8 255 174-452 15-300 (637)
452 cd05154 ACAD10_11_like Acyl-Co 99.3 5.9E-11 1.3E-15 110.2 12.8 142 176-333 4-207 (223)
453 COG3642 Mn2+-dependent serine/ 99.2 1.3E-10 2.8E-15 102.3 13.0 140 176-334 2-142 (204)
454 cd08783 Death_MALT1 Death doma 99.2 3.1E-11 6.8E-16 92.4 7.5 91 14-113 2-95 (97)
455 KOG0606|consensus 99.2 1.3E-11 2.9E-16 131.7 4.8 246 174-443 808-1084(1205)
456 KOG1243|consensus 99.2 4E-10 8.7E-15 115.9 14.5 167 189-381 31-199 (690)
457 PF01163 RIO1: RIO1 family; I 99.1 9.3E-10 2E-14 99.4 11.9 139 185-334 1-157 (188)
458 cd08782 Death_DAPK1 Death doma 99.1 3.2E-10 7E-15 87.3 6.5 76 20-111 2-81 (82)
459 KOG0601|consensus 99.0 2.5E-10 5.3E-15 116.2 5.8 236 176-448 271-514 (524)
460 cd08312 Death_MyD88 Death doma 99.0 9.8E-10 2.1E-14 84.4 6.9 68 20-105 1-72 (79)
461 KOG3741|consensus 99.0 2.2E-08 4.7E-13 100.4 18.0 168 183-384 289-475 (655)
462 PRK15123 lipopolysaccharide co 99.0 7.4E-09 1.6E-13 99.0 13.9 151 176-332 28-194 (268)
463 COG0478 RIO-like serine/threon 98.9 5.7E-09 1.2E-13 97.3 11.0 148 172-332 93-251 (304)
464 PF06293 Kdo: Lipopolysacchari 98.8 6.5E-08 1.4E-12 89.2 12.9 107 223-334 55-172 (206)
465 PRK09902 hypothetical protein; 98.8 1E-07 2.2E-12 86.9 13.8 143 178-332 26-179 (216)
466 cd08799 Death_UNC5C Death doma 98.7 3.8E-08 8.3E-13 75.5 7.7 75 16-108 1-79 (84)
467 cd08310 Death_NFkB-like Death 98.7 2.2E-08 4.8E-13 75.2 6.2 71 20-111 1-71 (72)
468 KOG2137|consensus 98.7 4.1E-09 8.9E-14 109.0 2.3 150 289-447 107-264 (700)
469 cd08802 Death_UNC5B Death doma 98.7 6.2E-08 1.3E-12 74.2 7.5 75 16-108 1-79 (84)
470 COG0661 AarF Predicted unusual 98.7 8.8E-08 1.9E-12 99.1 10.8 163 159-335 121-317 (517)
471 cd08800 Death_UNC5A Death doma 98.5 4.5E-07 9.8E-12 69.0 7.3 75 16-108 1-79 (84)
472 TIGR02172 Fb_sc_TIGR02172 Fibr 98.5 2.2E-06 4.7E-11 80.2 12.8 138 176-332 7-182 (226)
473 KOG1235|consensus 98.4 1.6E-06 3.5E-11 89.7 11.7 163 160-335 158-357 (538)
474 COG1718 RIO1 Serine/threonine 98.4 2.2E-06 4.7E-11 79.5 10.5 168 154-333 35-216 (268)
475 COG2112 Predicted Ser/Thr prot 98.3 2.8E-06 6.2E-11 74.6 9.3 131 174-335 26-158 (201)
476 cd08801 Death_UNC5D Death doma 98.3 3.6E-06 7.9E-11 64.3 7.4 71 16-104 1-75 (98)
477 PF06176 WaaY: Lipopolysacchar 98.3 5.1E-06 1.1E-10 76.2 9.9 137 176-331 37-182 (229)
478 PF01636 APH: Phosphotransfera 98.3 5.5E-06 1.2E-10 77.1 10.0 141 176-332 3-197 (239)
479 cd05150 APH Aminoglycoside 3'- 98.2 1.7E-05 3.7E-10 75.0 12.2 139 177-332 5-193 (244)
480 PLN02876 acyl-CoA dehydrogenas 98.1 3.1E-05 6.6E-10 86.1 13.3 78 176-265 44-131 (822)
481 PF12260 PIP49_C: Protein-kina 98.1 1.2E-05 2.7E-10 72.8 8.2 105 226-333 6-112 (188)
482 cd05155 APH_ChoK_like_1 Unchar 98.1 3.5E-05 7.7E-10 72.5 11.1 31 302-332 164-194 (235)
483 smart00005 DEATH DEATH domain, 97.9 1.8E-05 3.9E-10 62.3 5.3 81 19-111 3-85 (88)
484 PF13095 FTA2: Kinetochore Sim 97.9 0.00015 3.2E-09 65.8 11.1 131 176-330 43-206 (207)
485 KOG0576|consensus 97.8 3.8E-06 8.1E-11 86.6 -0.0 181 176-387 248-432 (829)
486 PRK10593 hypothetical protein; 97.8 0.0003 6.4E-09 68.7 13.2 74 176-265 20-100 (297)
487 cd05157 ETNK_euk Ethanolamine 97.8 0.00026 5.6E-09 66.4 11.3 73 176-265 4-79 (235)
488 PF00531 Death: Death domain; 97.8 1.7E-05 3.6E-10 61.7 2.6 76 23-111 2-79 (83)
489 KOG2268|consensus 97.7 2.8E-05 6.2E-10 74.6 4.0 150 171-332 93-251 (465)
490 PRK09550 mtnK methylthioribose 97.7 0.00064 1.4E-08 68.7 13.7 82 176-264 32-117 (401)
491 TIGR02721 ycfN_thiK thiamine k 97.7 0.00028 6.2E-09 67.2 10.4 138 177-332 3-175 (256)
492 PF10707 YrbL-PhoP_reg: PhoP r 97.6 0.0011 2.5E-08 60.4 12.8 138 176-326 7-165 (199)
493 PRK05231 homoserine kinase; Pr 97.6 0.0018 4E-08 63.7 15.0 32 301-332 186-217 (319)
494 TIGR00938 thrB_alt homoserine 97.6 0.0016 3.6E-08 63.7 13.9 161 155-332 8-217 (307)
495 cd08797 Death_NFkB1_p105 Death 97.5 0.00024 5.2E-09 53.3 5.9 71 20-111 1-74 (76)
496 cd05153 HomoserineK_II Homoser 97.5 0.0017 3.6E-08 63.2 12.7 140 176-332 20-205 (296)
497 cd01670 Death Death Domain: a 97.5 0.0002 4.4E-09 55.0 4.9 69 21-104 2-70 (79)
498 cd05152 MPH2' Macrolide 2'-Pho 97.4 0.00081 1.8E-08 64.9 9.8 31 303-333 186-217 (276)
499 cd08798 Death_NFkB2_p100 Death 97.4 0.00051 1.1E-08 51.5 5.8 70 21-111 2-74 (76)
500 cd05156 ChoK_euk Choline Kinas 97.3 0.0013 2.8E-08 64.2 10.1 74 176-266 4-85 (302)
No 1
>KOG1187|consensus
Probab=100.00 E-value=7.7e-54 Score=425.64 Aligned_cols=281 Identities=40% Similarity=0.632 Sum_probs=231.5
Q ss_pred cceeeeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHH
Q psy5603 150 ELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENE 229 (455)
Q Consensus 150 ~~~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 229 (455)
....|++.+|..||++|+.. ++||+|+||.||+|...+|+.||||++....... ...|.+|
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~------~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-------------~~eF~~E 121 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSES------NLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-------------EREFLNE 121 (361)
T ss_pred CcceeeHHHHHHHHhCCchh------cceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-------------hhHHHHH
Confidence 56789999999999999998 9999999999999999988999999886443210 1239999
Q ss_pred HHHHhhCCccceeeecccccC-c-eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCeee
Q psy5603 230 VQTLSQCKHVNLLRLLGLCNN-I-MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKPIIH 306 (455)
Q Consensus 230 ~~~l~~l~h~niv~l~~~~~~-~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~~~iiH 306 (455)
+.++.+++|||+|+++|||.+ + ..+||||||++|||.++|...... +++|.+|++||.++|+||+|||+. ..+|||
T Consensus 122 i~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiH 200 (361)
T KOG1187|consen 122 VEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIH 200 (361)
T ss_pred HHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEec
Confidence 999999999999999999998 5 489999999999999999986544 899999999999999999999996 347999
Q ss_pred cCCCCCcEEEcCCCceEEeeccccccccc-CCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCC
Q psy5603 307 RDVKSANVLLDENFVPKLGDFGIVKMSET-SNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKP 384 (455)
Q Consensus 307 ~Dikp~NILl~~~~~~kl~DFGla~~~~~-~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p 384 (455)
|||||+|||||+++.+||+|||+|+..+. .. ...+.. .||.+|+|||+. .|..+.|+|||||||+|+|++||+.|
T Consensus 201 rDiKssNILLD~~~~aKlsDFGLa~~~~~~~~--~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~ 277 (361)
T KOG1187|consen 201 RDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT--SVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKA 277 (361)
T ss_pred CCCCHHHeeECCCCCEEccCccCcccCCcccc--ceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcc
Confidence 99999999999999999999999976654 22 111111 899999999966 57899999999999999999999999
Q ss_pred CCCCc----chhhHH-Hhhhcccchhhccchhcc--CCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 385 IDDNN----TILYYY-LVVEQEVPVREVLDKEAG--EWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 385 ~~~~~----~~~~~~-~~~~~~~~~~~~~d~~~~--~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.+... .....+ ........+.+++|+.+. ..........+..+...|+..+|+.||+|.||++.|+.+.
T Consensus 278 ~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 278 VDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 98643 112222 223344588999999974 3332223333555677899999999999999999997765
No 2
>KOG0575|consensus
Probab=100.00 E-value=9.1e-49 Score=390.78 Aligned_cols=248 Identities=28% Similarity=0.417 Sum_probs=214.7
Q ss_pred CCCcCCCccCcCCCeEEEEEEE-cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++++.||+|||++||.+++ .+|..||+|++.+....+... .....+||+|-+++.|||||++++++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~----------reKv~~EIeIHr~L~HpnIV~f~~~F 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQ----------REKVLNEIEIHRSLKHPNIVQFYHFF 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcch----------HHHHHHHHHHHHhcCCCcEEeeeeEe
Confidence 4578889999999999999998 679999999998765543322 45588999999999999999999999
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...|+|.|+|.+++|..++.+ ..+++++.++.++.||+.||.|||+ ++|||||||..|++|+++.++||+||
T Consensus 88 EDs~nVYivLELC~~~sL~el~Kr---rk~ltEpEary~l~QIv~GlkYLH~--~~IiHRDLKLGNlfL~~~~~VKIgDF 162 (592)
T KOG0575|consen 88 EDSNNVYIVLELCHRGSLMELLKR---RKPLTEPEARYFLRQIVEGLKYLHS--LGIIHRDLKLGNLFLNENMNVKIGDF 162 (592)
T ss_pred ecCCceEEEEEecCCccHHHHHHh---cCCCCcHHHHHHHHHHHHHHHHHHh--cCceecccchhheeecCcCcEEeccc
Confidence 99 888999999999999999885 4579999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|||........ ...+++|||.|+|||++. .+.+..+||||+|||+|.||.|++||...+....+..+...+-.++.
T Consensus 163 GLAt~le~~~E---rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~ 239 (592)
T KOG0575|consen 163 GLATQLEYDGE---RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS 239 (592)
T ss_pred ceeeeecCccc---ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc
Confidence 99988765432 244689999999999764 46789999999999999999999999988766666666554444443
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.++...++||.++|..+|.+|||+++|+.
T Consensus 240 ------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 240 ------------HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ------------ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 34455889999999999999999999975
No 3
>KOG0192|consensus
Probab=100.00 E-value=3e-48 Score=383.33 Aligned_cols=251 Identities=34% Similarity=0.533 Sum_probs=205.7
Q ss_pred CccCcCCCeEEEEEEEcCCcE-EEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc--e
Q psy5603 176 NKLGEGQFGTVYYGKLKNGME-IAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI--M 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~-vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~ 252 (455)
+.||+|+||+||+|.++ |+. ||||++........ ....|.+|+.+|++++|||||+++|+|.+. .
T Consensus 47 ~~iG~G~~g~V~~~~~~-g~~~vavK~~~~~~~~~~-----------~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~ 114 (362)
T KOG0192|consen 47 EVLGSGSFGTVYKGKWR-GTDVVAVKIISDPDFDDE-----------SRKAFRREASLLSRLRHPNIVQFYGACTSPPGS 114 (362)
T ss_pred hhcccCCceeEEEEEeC-CceeEEEEEecchhcChH-----------HHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence 56999999999999998 566 99999975432111 055699999999999999999999999884 5
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-eeecCCCCCcEEEcCCC-ceEEeecccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSANVLLDENF-VPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~-iiH~Dikp~NILl~~~~-~~kl~DFGla 330 (455)
.++|||||++|+|.+++... ....+++..++.++.+||+|+.|||+ .+ ||||||||+|||++.++ ++||+|||++
T Consensus 115 ~~iVtEy~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~--~~~iIHrDLK~~NiLv~~~~~~~KI~DFGls 191 (362)
T KOG0192|consen 115 LCIVTEYMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHS--EGPIIHRDLKSDNILVDLKGKTLKIADFGLS 191 (362)
T ss_pred eEEEEEeCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc--CCCeeecccChhhEEEcCCCCEEEECCCccc
Confidence 89999999999999999874 34579999999999999999999999 77 99999999999999998 9999999999
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+...... .......||..|||||++.+ .++.|+|||||||++|||+||..||.+.................
T Consensus 192 r~~~~~~---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp--- 265 (362)
T KOG0192|consen 192 REKVISK---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRP--- 265 (362)
T ss_pred eeecccc---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC---
Confidence 8765432 11223689999999998875 48999999999999999999999999887533333322211110
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.-+..++..+..|+.+||..||.+||++.+++..|+.+..
T Consensus 266 -------~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 266 -------PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred -------CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 1111245558888899999999999999999999987753
No 4
>KOG0615|consensus
Probab=100.00 E-value=3.3e-49 Score=376.64 Aligned_cols=257 Identities=25% Similarity=0.407 Sum_probs=207.3
Q ss_pred CCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 168 RKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 168 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
...+|.+.+.||+|+||.|-+|..+ +|+.||||++++.......... .......+|+++|++++|||||++++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~------~~~~~v~~EieILkkL~HP~IV~~~d 243 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAI------AKTRDVQNEIEILKKLSHPNIVRIKD 243 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccc------cchhhhHHHHHHHHhcCCCCEEEEee
Confidence 3456788899999999999999876 5999999999876543322100 01222579999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC---Cce
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN---FVP 322 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~---~~~ 322 (455)
++.. +..|+||||+.||.|.+++... ..+.+..-..++.|++.|+.|||+ +||+||||||+|||+..+ ..+
T Consensus 244 ~f~~~ds~YmVlE~v~GGeLfd~vv~n---k~l~ed~~K~~f~Qll~avkYLH~--~GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 244 FFEVPDSSYMVLEYVEGGELFDKVVAN---KYLREDLGKLLFKQLLTAVKYLHS--QGIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred eeecCCceEEEEEEecCccHHHHHHhc---cccccchhHHHHHHHHHHHHHHHH--cCcccccCCcceEEeccCCcceEE
Confidence 9988 7779999999999999999874 458888889999999999999999 899999999999999765 789
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccccCC---CC-cccchHHHHHHHHHHHcCCCCCCCCcchh-hHHHh
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ---IS-TKTDVFSYGVILLELLTGMKPIDDNNTIL-YYYLV 397 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~-~~sDv~SlGvvl~elltG~~p~~~~~~~~-~~~~~ 397 (455)
||+|||+|++.+... ...+.+||+.|.|||++.++ ++ .++|+||+|||||-+|+|.+||.+..... ....+
T Consensus 319 KItDFGlAK~~g~~s----fm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI 394 (475)
T KOG0615|consen 319 KITDFGLAKVSGEGS----FMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQI 394 (475)
T ss_pred Eecccchhhccccce----ehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHH
Confidence 999999999876432 34578999999999977442 33 38999999999999999999999876433 33222
Q ss_pred hhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+ ++.....++....+||.+||..||++||+++|+++
T Consensus 395 ~~G~y~f--------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 395 LKGRYAF--------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred hcCcccc--------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 2222111 22334567788999999999999999999999976
No 5
>KOG0581|consensus
Probab=100.00 E-value=1.6e-48 Score=369.36 Aligned_cols=241 Identities=29% Similarity=0.395 Sum_probs=199.2
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c-e
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I-M 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~-~ 252 (455)
+.||+|..|+||++.++ +++.+|+|++..... ....+++.+|++++++++|||||.+||.|.. . .
T Consensus 85 ~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~------------~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~ 152 (364)
T KOG0581|consen 85 GVLGSGNGGTVYKVRHKPTGKIYALKVILLNID------------PALQKQILRELEILRSCQSPYIVGFYGAFYSNGEE 152 (364)
T ss_pred hhcccCCCcEEEEEEEcCCCeEEEEEeecccCC------------HHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCce
Confidence 78999999999999988 478899999953321 1226779999999999999999999997655 6 4
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.+++||||.+|||.+.+... ..+++....+|+.++++||.|||+. ++||||||||+|||++..|.+||||||.+..
T Consensus 153 isI~mEYMDgGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~-~~IIHRDIKPsNlLvNskGeVKicDFGVS~~ 228 (364)
T KOG0581|consen 153 ISICMEYMDGGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEE-RKIIHRDIKPSNLLVNSKGEVKICDFGVSGI 228 (364)
T ss_pred EEeehhhcCCCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhc-cCeeeccCCHHHeeeccCCCEEeccccccHH
Confidence 99999999999999999874 4599999999999999999999953 7899999999999999999999999999886
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcc-----hhhHHHhhhcccchhh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT-----ILYYYLVVEQEVPVRE 406 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~-----~~~~~~~~~~~~~~~~ 406 (455)
.... ...++.||..|||||.+.+ .++.++||||||++++|+++|+.||..... ......+..+
T Consensus 229 lvnS-----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~------ 297 (364)
T KOG0581|consen 229 LVNS-----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE------ 297 (364)
T ss_pred hhhh-----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC------
Confidence 6543 3457899999999997765 689999999999999999999999987521 1111111111
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+...++..+++||.+||.+||.+||+++|+++
T Consensus 298 ----ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 298 ----PPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred ----CCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1112222246677999999999999999999999875
No 6
>KOG0595|consensus
Probab=100.00 E-value=8e-47 Score=360.73 Aligned_cols=205 Identities=32% Similarity=0.511 Sum_probs=177.6
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
-|...+.||+|+||+||+|+++ ++..||||.+.++... ....+-+..|+++|+.++|||||.+++++.
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-----------~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~ 79 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-----------KKLVELLLSEIKILKELKHPNIVRLLDCIE 79 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-----------HHHHHHHHHHHHHHHhcCCcceeeEEEEEe
Confidence 3455688999999999999987 4899999999765321 112444789999999999999999999988
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC------Cce
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN------FVP 322 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~------~~~ 322 (455)
+ +..|||||||.||+|.++++..+ .+++..+..++.|+|.||++||+ ++||||||||+||||+.. -.+
T Consensus 80 ~~~~i~lVMEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~--~~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 80 DDDFIYLVMEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHE--NNIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred cCCeEEEEEEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCcceEEeccCCCCCCCceE
Confidence 7 88999999999999999999854 59999999999999999999999 899999999999999765 568
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHH
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
||+|||+||...... ...+.+|++-|||||++ ..+|+.|+|+||+|+|||+|++|.+||+.........
T Consensus 155 KIADFGfAR~L~~~~----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~ 224 (429)
T KOG0595|consen 155 KIADFGFARFLQPGS----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLL 224 (429)
T ss_pred EecccchhhhCCchh----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHH
Confidence 999999999887543 35678999999999976 7789999999999999999999999999887544433
No 7
>KOG0598|consensus
Probab=100.00 E-value=3.3e-47 Score=360.32 Aligned_cols=237 Identities=27% Similarity=0.364 Sum_probs=201.7
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.+.||+|+||+||.++.++ ++.+|+|++++....... .......|..||.+++||.||+++-.+++ +
T Consensus 29 ~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~----------e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~ 98 (357)
T KOG0598|consen 29 ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKK----------EVRHTKAERNILSKIKHPFIVKLIYSFQTEE 98 (357)
T ss_pred eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhh----------hHHHHHHHHHHHHhCCCCcEeeeEEecccCC
Confidence 34999999999999999774 889999999876653321 14557889999999999999999988887 8
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+|++|+.||.|...|.+.+ .+++..+..++.+|+.||.|||+ +|||||||||+|||||.+|+++|+|||+|+
T Consensus 99 kLylVld~~~GGeLf~hL~~eg---~F~E~~arfYlaEi~lAL~~LH~--~gIiyRDlKPENILLd~~GHi~LtDFgL~k 173 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREG---RFSEDRARFYLAEIVLALGYLHS--KGIIYRDLKPENILLDEQGHIKLTDFGLCK 173 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcC---CcchhHHHHHHHHHHHHHHHHHh--CCeeeccCCHHHeeecCCCcEEEeccccch
Confidence 9999999999999999999854 59999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcc-cchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE-VPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~-~~~~~~~d 409 (455)
....... .+.+++||+.|||||++ ..+++..+|+||+||++|||++|.+||...+...+...+..+. ...+.++
T Consensus 174 ~~~~~~~---~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~l- 249 (357)
T KOG0598|consen 174 EDLKDGD---ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYL- 249 (357)
T ss_pred hcccCCC---ccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccC-
Confidence 6554432 24568999999999965 5578999999999999999999999999988777776666554 2222223
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCC
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
+...++++.+++..+|++|.
T Consensus 250 -----------s~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 250 -----------SEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred -----------CHHHHHHHHHHhccCHHHhc
Confidence 33478889999999999995
No 8
>KOG0197|consensus
Probab=100.00 E-value=1.2e-46 Score=371.76 Aligned_cols=249 Identities=29% Similarity=0.456 Sum_probs=208.5
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
+.||+|-||.||.|.++....||||.++.... ....|.+|+++|++++|+|||+++|+|.. +.+|
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m--------------~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piy 277 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM--------------SPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIY 277 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEecccc--------------ChhHHHHHHHHHHhCcccCeEEEEEEEecCCceE
Confidence 78999999999999999777999999986532 13459999999999999999999999988 5589
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
||||||+.|||.++|... .+..+...+.+.++.|||+|++||++ +++|||||-..||||++++.+||+|||+||...
T Consensus 278 IVtE~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLes--~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~ 354 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLES--KNYIHRDLAARNILVDEDLVVKISDFGLARLIG 354 (468)
T ss_pred EEEEecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHHh--CCccchhhhhhheeeccCceEEEcccccccccC
Confidence 999999999999999973 35679999999999999999999999 889999999999999999999999999999554
Q ss_pred cCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 335 TSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.+.... .....-...|.|||++ .+.++.|||||||||+||||+| |+.||.+.........+.. ..
T Consensus 355 d~~Y~~--~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~-----------Gy 421 (468)
T KOG0197|consen 355 DDEYTA--SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLER-----------GY 421 (468)
T ss_pred CCceee--cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhc-----------cC
Confidence 433211 1222334469999965 6789999999999999999999 9999998875444333332 22
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+-..+..|+..+.+++..||..+|++|||+..+...|+++..
T Consensus 422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 223455677788899999999999999999999999988754
No 9
>KOG0591|consensus
Probab=100.00 E-value=4.3e-47 Score=346.00 Aligned_cols=253 Identities=24% Similarity=0.354 Sum_probs=206.1
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc-ccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL-CNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-~~~ 250 (455)
++.++||+|+||+||++... +|..||.|.++-... + ....+....|+.+|++++|||||++++. +.+
T Consensus 22 ~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~m-------d----~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~ 90 (375)
T KOG0591|consen 22 QILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMM-------D----AKARQDCVKEISLLKQLNHPNIVQYYAHSFIE 90 (375)
T ss_pred HHHHHHcCCcchheEEeeeccCcchhhhhhcchhhc-------c----HHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc
Confidence 45589999999999999864 689999999873221 1 1225668899999999999999999993 333
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC--CCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSL--SKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~--~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
...++|||||.+|+|.+.+..... +..+++..+++++.|+++||.++|+. ..-|+||||||+||+|+.+|.+||+
T Consensus 91 ~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLG 170 (375)
T KOG0591|consen 91 DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLG 170 (375)
T ss_pred cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeec
Confidence 347899999999999999875433 56799999999999999999999983 3349999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
|||++++.... +..+...+|||.||+||.+ ..+++.+|||||+||++|||+.-++||.+.+-.....++...+.
T Consensus 171 DfGL~r~l~s~---~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~-- 245 (375)
T KOG0591|consen 171 DFGLGRFLSSK---TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY-- 245 (375)
T ss_pred cchhHhHhcch---hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC--
Confidence 99999987654 2345678999999999965 55789999999999999999999999999876655555554321
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
.+.+...++..+..+|..|+..||+.||+...++..+
T Consensus 246 --------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 246 --------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred --------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 1233456777899999999999999999965555444
No 10
>KOG0592|consensus
Probab=100.00 E-value=2.2e-45 Score=361.11 Aligned_cols=248 Identities=27% Similarity=0.406 Sum_probs=209.8
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
..++.||+|+|++||+|+.+ +++.||||++.+.-.....+ .+....|-.+|.+| .||.|++|+-.+.|
T Consensus 76 ~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~K----------vkYV~~Ek~~l~~L~~hPgivkLy~TFQD 145 (604)
T KOG0592|consen 76 KFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKK----------VKYVTREKEALTQLSGHPGIVKLYFTFQD 145 (604)
T ss_pred chhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcc----------cchhhHHHHHHHHhhCCCCeEEEEEEeec
Confidence 34588999999999999976 48999999998765543332 33467788899999 89999999998888
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
..+|+|+||+++|+|.++|.+.+ .+++.....++.+|+.||+|||+ .|||||||||+|||||+++++||+|||.
T Consensus 146 ~~sLYFvLe~A~nGdll~~i~K~G---sfde~caR~YAAeIldAleylH~--~GIIHRDlKPENILLd~dmhikITDFGs 220 (604)
T KOG0592|consen 146 EESLYFVLEYAPNGDLLDLIKKYG---SFDETCARFYAAEILDALEYLHS--NGIIHRDLKPENILLDKDGHIKITDFGS 220 (604)
T ss_pred ccceEEEEEecCCCcHHHHHHHhC---cchHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeEcCCCcEEEeeccc
Confidence 88999999999999999999854 59999999999999999999999 8999999999999999999999999999
Q ss_pred ccccccCCcc------e----eeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhh
Q psy5603 330 VKMSETSNMK------T----MYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 330 a~~~~~~~~~------~----~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
|+........ . .....++||..|.+||++.. ..++.+|+|+||||||.|+.|.+||.+.+++.....+.
T Consensus 221 AK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~ 300 (604)
T KOG0592|consen 221 AKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQ 300 (604)
T ss_pred cccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHH
Confidence 9876543221 1 11145899999999998765 56889999999999999999999999999988888877
Q ss_pred hcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.-...+++.+ +..+.+||.+.|..||++|++..++.+
T Consensus 301 ~l~y~fp~~f------------p~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 301 ALDYEFPEGF------------PEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred HhcccCCCCC------------CHHHHHHHHHHHccCccccccHHHHhh
Confidence 6544444333 345889999999999999999988754
No 11
>KOG0593|consensus
Probab=100.00 E-value=1.9e-45 Score=338.25 Aligned_cols=257 Identities=26% Similarity=0.382 Sum_probs=201.2
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+...++|+|+||.||+++.++ |+.||||++....+ .....+-..+|++.|++++|||+|.++++|..
T Consensus 4 YE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esed-----------d~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr 72 (396)
T KOG0593|consen 4 YEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESED-----------DPVVKKIALREIRMLKQLKHENLVNLIEVFRR 72 (396)
T ss_pred HhhhhccccCcceEEEEeccCCcccEEEEEeeccCCc-----------cHHHHHHHHHHHHHHHhcccchHHHHHHHHHh
Confidence 4555889999999999999875 99999999964322 12234557899999999999999999998887
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...+||+|||.. ++.+-|.... ..++...+.+++.|++.|+.|+|+ +++|||||||+|||++.+|.+||||||+
T Consensus 73 krklhLVFE~~dh-TvL~eLe~~p--~G~~~~~vk~~l~Q~l~ai~~cHk--~n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 73 KRKLHLVFEYCDH-TVLHELERYP--NGVPSELVKKYLYQLLKAIHFCHK--NNCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred cceeEEEeeecch-HHHHHHHhcc--CCCCHHHHHHHHHHHHHHhhhhhh--cCeecccCChhheEEecCCcEEeccchh
Confidence 888999999965 4555555533 358899999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cc----
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QE---- 401 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~---- 401 (455)
||...... ...+..+.|..|.|||.+.| +|+..+||||+||++.||++|.+.|.+.++....+.+.. ++
T Consensus 148 AR~L~~pg---d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~pr 224 (396)
T KOG0593|consen 148 ARTLSAPG---DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPR 224 (396)
T ss_pred hHhhcCCc---chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHH
Confidence 99776321 11235688999999997755 689999999999999999999999998875443333322 11
Q ss_pred -------------cchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 402 -------------VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 -------------~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+++.-+...-+..-..++..+-+|+..|+..||.+|++.++++.
T Consensus 225 hq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 225 HQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred HHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1112222221111112345668889999999999999999999864
No 12
>KOG0616|consensus
Probab=100.00 E-value=6e-45 Score=334.31 Aligned_cols=231 Identities=30% Similarity=0.427 Sum_probs=203.2
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
..||.|+||.|.+++.+. |..+|+|++.+... ......+...+|..+|+.+.||+++++++.+.+ +..
T Consensus 50 ~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v----------VklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~l 119 (355)
T KOG0616|consen 50 KTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV----------VKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNL 119 (355)
T ss_pred eeeccCccceEEEEEEccCCceeehhhcCHHHH----------HHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeE
Confidence 889999999999999874 78899999975432 122235567889999999999999999998887 899
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||.+||.|..+|++. .++++..++.++.||+.||+|||+ .+|++||+||+|||||.+|.+||+|||+|+..
T Consensus 120 ymvmeyv~GGElFS~Lrk~---~rF~e~~arFYAAeivlAleylH~--~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 120 YMVMEYVPGGELFSYLRKS---GRFSEPHARFYAAEIVLALEYLHS--LDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred EEEEeccCCccHHHHHHhc---CCCCchhHHHHHHHHHHHHHHHHh--cCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 9999999999999999984 469999999999999999999999 78999999999999999999999999999875
Q ss_pred ccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
... +.+.+|||.|+|||++ ...++.++|+|||||++|||+.|.+||...+....+.++.+.+..++.++++.
T Consensus 195 ~~r------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~- 267 (355)
T KOG0616|consen 195 SGR------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSD- 267 (355)
T ss_pred cCc------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHH-
Confidence 432 4568999999999966 45678899999999999999999999999999888888888888887776654
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCC
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKR 439 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~R 439 (455)
+++||.+.++.|-.+|
T Consensus 268 -----------~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 268 -----------AKDLLKKLLQVDLTKR 283 (355)
T ss_pred -----------HHHHHHHHHhhhhHhh
Confidence 7888889999987777
No 13
>KOG0198|consensus
Probab=100.00 E-value=6.3e-45 Score=349.80 Aligned_cols=250 Identities=30% Similarity=0.439 Sum_probs=198.5
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+..++.||+|+||.||++...+ |...|||.+...... . .+.+.+|+.+|++++|||||+++|....
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~-----------~--~~~l~~Ei~iL~~l~~p~IV~~~G~~~~ 85 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP-----------T--SESLEREIRILSRLNHPNIVQYYGSSSS 85 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccch-----------h--HHHHHHHHHHHHhCCCCCEEeeCCcccc
Confidence 3456899999999999999874 889999998644110 0 4458899999999999999999997433
Q ss_pred -c--eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-CCceEEee
Q psy5603 251 -I--MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGD 326 (455)
Q Consensus 251 -~--~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~D 326 (455)
. .+++.|||+++|||.+++.+.++ .++++.+..++.||+.||.|||+ +||||+||||+|||++. ++.+||+|
T Consensus 86 ~~~~~~~i~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs--~g~vH~DiK~~NiLl~~~~~~~KlaD 161 (313)
T KOG0198|consen 86 RENDEYNIFMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHS--KGIVHCDIKPANILLDPSNGDVKLAD 161 (313)
T ss_pred ccCeeeEeeeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHh--CCEeccCcccceEEEeCCCCeEEecc
Confidence 3 68999999999999999998653 69999999999999999999999 89999999999999999 79999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccCCC--CcccchHHHHHHHHHHHcCCCCCCCC-cchhhHHHhhhcccc
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDN-NTILYYYLVVEQEVP 403 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~sDv~SlGvvl~elltG~~p~~~~-~~~~~~~~~~~~~~~ 403 (455)
||++...............+.||+.|||||+...+. ..++|||||||++.||+||.+||... ........+.... .
T Consensus 162 FG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~-~ 240 (313)
T KOG0198|consen 162 FGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRED-S 240 (313)
T ss_pred CccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccC-C
Confidence 999886654111222234679999999999776433 34999999999999999999999873 2222222221111 1
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.+ .+ +..++...++||.+|+..+|++|||+.++++.
T Consensus 241 ~P--------~i-p~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 241 LP--------EI-PDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred CC--------CC-CcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence 11 11 22356678999999999999999999999874
No 14
>KOG0583|consensus
Probab=100.00 E-value=6.3e-44 Score=355.43 Aligned_cols=249 Identities=30% Similarity=0.451 Sum_probs=206.5
Q ss_pred CCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeeccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGL 247 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~ 247 (455)
..|++++.||+|+||.|+.|... ++..||||++......... . .....+.+|+.++++++ ||||++++.+
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~-~-------~~~~~i~rEi~~~~~~~~HpnI~~l~ev 88 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS-Q-------KLDELIKREISILRRLRSHPNIIRLLEV 88 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc-c-------ccchhhHHHHHHHHHhccCCCEeEEEEE
Confidence 34677899999999999999875 5899999977654221111 0 11334668999999999 9999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC-CceEEe
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLG 325 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~ 325 (455)
... ...++||||+.||+|.+++.. ..++.+..+..++.|++.|++|||+ +||+||||||+|||+|.+ +.+||+
T Consensus 89 ~~t~~~~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~--~gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 89 FATPTKIYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHS--RGIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred EecCCeEEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEecCCCCCEEEe
Confidence 877 779999999999999999998 3468999999999999999999999 899999999999999999 999999
Q ss_pred ecccccccc-cCCcceeeeccCCCCCCCCCcccccCC--C-CcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcc
Q psy5603 326 DFGIVKMSE-TSNMKTMYTENLTGTRPYMPPEAMHCQ--I-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 326 DFGla~~~~-~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~-~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
|||++.... ... .....+||+.|+|||++.+. | ..++||||+||+||.|++|..||+..+.......+....
T Consensus 164 DFG~s~~~~~~~~----~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~ 239 (370)
T KOG0583|consen 164 DFGLSAISPGEDG----LLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGE 239 (370)
T ss_pred ccccccccCCCCC----cccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCC
Confidence 999999774 221 23467999999999988764 4 468999999999999999999999977655555555555
Q ss_pred cchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
..++..+. +..+..|+.+||..+|.+|+++.+++
T Consensus 240 ~~~p~~~~-----------S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 240 FKIPSYLL-----------SPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ccCCCCcC-----------CHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 55555542 33478889999999999999999997
No 15
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.8e-43 Score=350.01 Aligned_cols=258 Identities=24% Similarity=0.378 Sum_probs=198.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 244 (455)
|++.++||+|+||.||+|.+. +++.||||+++.... . .....+.+|+.++.++ +||||+++
T Consensus 9 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~niv~~ 76 (338)
T cd05102 9 LRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT------A------SEHKALMSELKILIHIGNHLNVVNL 76 (338)
T ss_pred ceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc------h------HHHHHHHHHHHHHHHhccCcceeeE
Confidence 466799999999999999742 246799999864321 0 0134588999999999 89999999
Q ss_pred cccccC--ceeEEEEEeccCCCHHHHHhhcCC------------------------------------------------
Q psy5603 245 LGLCNN--IMNCIVYEYMCNGSLYDRLARVNN------------------------------------------------ 274 (455)
Q Consensus 245 ~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------ 274 (455)
+++|.. ...++||||+++|+|.+++.....
T Consensus 77 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T cd05102 77 LGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGS 156 (338)
T ss_pred EeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcc
Confidence 998765 457899999999999999975321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeee
Q psy5603 275 -----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 343 (455)
Q Consensus 275 -----------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 343 (455)
..++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++....... ....
T Consensus 157 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-~~~~ 233 (338)
T cd05102 157 TNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRK 233 (338)
T ss_pred cccchhccccccCCCCHHHHHHHHHHHHHHHHHHHH--CCEECCCCccceEEEcCCCcEEEeecccccccccCcc-hhcc
Confidence 1358889999999999999999999 8999999999999999999999999999986533221 1112
Q ss_pred ccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHH
Q psy5603 344 ENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVE 421 (455)
Q Consensus 344 ~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 421 (455)
....++..|+|||++ ...++.++|||||||++|||++ |..||................... ..+..++
T Consensus 234 ~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~----------~~~~~~~ 303 (338)
T cd05102 234 GSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM----------RAPENAT 303 (338)
T ss_pred cCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC----------CCCCCCC
Confidence 234567889999965 4467999999999999999997 999998754322111111111000 0112234
Q ss_pred HHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 422 TLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 422 ~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+.+++.+||..||++||++.++++.|++++.
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 458889999999999999999999999999875
No 16
>KOG0578|consensus
Probab=100.00 E-value=2.4e-43 Score=349.34 Aligned_cols=260 Identities=25% Similarity=0.423 Sum_probs=215.2
Q ss_pred HHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh
Q psy5603 157 CDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ 235 (455)
Q Consensus 157 ~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 235 (455)
..+......-+...+|..-.+||+|+.|.||.+... +++.||||++....... ...+.+|+.+|+.
T Consensus 260 ~~l~~v~~~~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~-------------keLilnEi~Vm~~ 326 (550)
T KOG0578|consen 260 AKLKRVVSQGDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK-------------KELLLNEILVMRD 326 (550)
T ss_pred HHhheeccCCChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc-------------hhhhHHHHHHHHh
Confidence 344455556666677777799999999999999865 47889999997544311 3347899999999
Q ss_pred CCccceeeecccc-cCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcE
Q psy5603 236 CKHVNLLRLLGLC-NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 236 l~h~niv~l~~~~-~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NI 314 (455)
.+|+|||.++..+ ..+..+.|||||.||+|.|.+.. ..+++.++..|+.+++.||+|||. +||+|||||++||
T Consensus 327 ~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~--~gIiHrDIKSDnI 400 (550)
T KOG0578|consen 327 LHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHA--RGIIHRDIKSDNI 400 (550)
T ss_pred ccchHHHHHHHHhcccceeEEEEeecCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHh--cceeeecccccee
Confidence 9999999999954 45889999999999999998875 359999999999999999999999 8999999999999
Q ss_pred EEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhh
Q psy5603 315 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILY 393 (455)
Q Consensus 315 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~ 393 (455)
|++.+|.+||+|||+|........ .....+||+.|||||+. ...|++++||||||++++||+-|.+||-..+...-
T Consensus 401 LL~~~g~vKltDFGFcaqi~~~~~---KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA 477 (550)
T KOG0578|consen 401 LLTMDGSVKLTDFGFCAQISEEQS---KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 477 (550)
T ss_pred EeccCCcEEEeeeeeeeccccccC---ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH
Confidence 999999999999999887654432 34568999999999966 45799999999999999999999999998776555
Q ss_pred HHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+.....+ ....+..++..+++|+.+||..|+.+||++.|+++
T Consensus 478 lyLIa~ng~P---------~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 478 LYLIATNGTP---------KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHhhcCCC---------CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 5554432211 11223466778999999999999999999999986
No 17
>KOG0193|consensus
Probab=100.00 E-value=6.3e-44 Score=354.73 Aligned_cols=257 Identities=29% Similarity=0.502 Sum_probs=208.6
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCce
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIM 252 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 252 (455)
.++.+||+|.||+||+|+|. ..||||+++...... ...+.|.+|+..+++-+|.||+-+.|||....
T Consensus 395 ~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~-----------~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 395 LLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTP-----------EQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred hccceeccccccceeecccc--cceEEEEEecCCCCH-----------HHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 46789999999999999996 479999998654421 13677999999999999999999999999977
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
+.+|..+|.|-||+.+|+-.+ ..+...+.+.|+.||+.|+.|||. ++|||||||+.||+|.+++.+||+|||++..
T Consensus 462 ~AIiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHA--K~IIHrDLKSnNIFl~~~~kVkIgDFGLatv 537 (678)
T KOG0193|consen 462 LAIITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHA--KNIIHRDLKSNNIFLHEDLKVKIGDFGLATV 537 (678)
T ss_pred eeeeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhh--hhhhhhhccccceEEccCCcEEEecccceee
Confidence 799999999999999998765 368999999999999999999999 9999999999999999999999999999876
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
...-. .........|...|||||++.. .++..|||||||||+|||+||..||.....+...+.+-.+... ++..
T Consensus 538 k~~w~-g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~-pd~s 615 (678)
T KOG0193|consen 538 KTRWS-GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLM-PDLS 615 (678)
T ss_pred eeeec-cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccC-ccch
Confidence 54332 1122345678889999997643 4789999999999999999999999955443332222211111 0110
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.....+++.+++|+..|+..++++||.+.+|+..|+.++.
T Consensus 616 ------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 616 ------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 1123567779999999999999999999999999988764
No 18
>KOG0582|consensus
Probab=100.00 E-value=5.6e-43 Score=336.99 Aligned_cols=260 Identities=23% Similarity=0.323 Sum_probs=205.9
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++...||.|..++||+|... .+..||||++.-.... .....+.+|++.++.++||||++++..|.
T Consensus 27 ~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~------------~~ld~l~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 27 DYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN------------NDLDALRKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred ceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh------------hhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence 3567789999999999999875 4799999999754331 11556889999999999999999998655
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ..+++||+||.+||+.+.+...-. ..+++..+..|++++++||.|||. +|.||||||+.||||+.+|.+||+|||
T Consensus 95 v~~~LWvVmpfMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~--~G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 95 VDSELWVVMPFMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQ--NGHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred ecceeEEeehhhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHh--cCceecccccccEEEcCCCcEEEcCce
Confidence 4 899999999999999999987543 459999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeee-ccCCCCCCCCCccccc---CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 329 IVKMSETSNMKTMYT-ENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~-~~~~gt~~Y~aPE~~~---~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
.+-............ ..+.||+.|||||++. .+|+.|+|||||||+..||.+|+.||.......+......+..+.
T Consensus 172 vsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~ 251 (516)
T KOG0582|consen 172 VSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPT 251 (516)
T ss_pred eeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCC
Confidence 865544433222222 6789999999999852 368999999999999999999999999876544333333222221
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...............++.+|+.|+..||.+|||++++++
T Consensus 252 ~~--t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 252 LL--TSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred cc--cccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11 111111112344557889999999999999999999875
No 19
>KOG0588|consensus
Probab=100.00 E-value=3.8e-43 Score=351.91 Aligned_cols=245 Identities=28% Similarity=0.426 Sum_probs=209.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++-||.|+.|.|-+|++. +|+.+|||++.+........ ...+.+|+-+|+-+.||||+.+|+.+.+
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~----------~~~IerEIviMkLi~HpnVl~LydVwe~ 83 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQ----------PAGIEREIVIMKLIEHPNVLRLYDVWEN 83 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeecccccccccc----------ccchhhhhHHHHHhcCCCeeeeeeeecc
Confidence 578899999999999999975 69999999998764333222 2347789999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
.++|+|.||++||.|+++|.+ .+++++..+.+++.||+.|+.|+|. .+|+|||+||+|+|||.++.+||+|||+
T Consensus 84 ~~~lylvlEyv~gGELFdylv~---kG~l~e~eaa~ff~QIi~gv~yCH~--~~icHRDLKpENlLLd~~~nIKIADFGM 158 (786)
T KOG0588|consen 84 KQHLYLVLEYVPGGELFDYLVR---KGPLPEREAAHFFRQILDGVSYCHA--FNICHRDLKPENLLLDVKNNIKIADFGM 158 (786)
T ss_pred CceEEEEEEecCCchhHHHHHh---hCCCCCHHHHHHHHHHHHHHHHHhh--hcceeccCCchhhhhhcccCEeeeccce
Confidence 899999999999999999998 4569999999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccCC-C-CcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-I-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~-~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
|..-..+.. -.+.||++.|.|||++.|. | +.++||||+|||||.||||+.||++++......++..+...++.+
T Consensus 159 AsLe~~gkl----LeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~ 234 (786)
T KOG0588|consen 159 ASLEVPGKL----LETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSN 234 (786)
T ss_pred eecccCCcc----ccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCc
Confidence 987554432 3456999999999988775 3 569999999999999999999999877555555555555544444
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++...++||.+|+..||.+|.++.||++
T Consensus 235 ------------Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 235 ------------ISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred ------------CCHHHHHHHHHHhccCccccccHHHHhh
Confidence 4445899999999999999999999986
No 20
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.9e-42 Score=334.47 Aligned_cols=262 Identities=20% Similarity=0.327 Sum_probs=205.6
Q ss_pred CcceeeeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHH
Q psy5603 149 GELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFEN 228 (455)
Q Consensus 149 ~~~~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (455)
.++..+++.++.. ... ..||+|++|.||+|.++ |+.||||+++.... . .......|.+
T Consensus 10 ~~~~~i~~~~i~~-----~~~------~~i~~g~~~~v~~~~~~-~~~vavK~~~~~~~------~----~~~~~~~~~~ 67 (283)
T PHA02988 10 NDIKCIESDDIDK-----YTS------VLIKENDQNSIYKGIFN-NKEVIIRTFKKFHK------G----HKVLIDITEN 67 (283)
T ss_pred CcceecCHHHcCC-----CCC------eEEeeCCceEEEEEEEC-CEEEEEEecccccc------c----cHHHHHHHHH
Confidence 3455667776622 111 67999999999999995 79999999864321 0 0111456889
Q ss_pred HHHHHhhCCccceeeecccccC-----ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy5603 229 EVQTLSQCKHVNLLRLLGLCNN-----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 229 E~~~l~~l~h~niv~l~~~~~~-----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ 303 (455)
|+.++++++||||++++|++.+ ...++||||+++|+|.+++... ..+++.....++.+++.||.|||+. .+
T Consensus 68 E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~-~~ 143 (283)
T PHA02988 68 EIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKY-TN 143 (283)
T ss_pred HHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhc-CC
Confidence 9999999999999999997754 3568999999999999999863 3689999999999999999999973 26
Q ss_pred eeecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc---CCCCcccchHHHHHHHHHHHc
Q psy5603 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLT 380 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~sDv~SlGvvl~ellt 380 (455)
++||||||+|||+++++.+||+|||+++...... ....||..|+|||++. +.++.++|||||||++|||+|
T Consensus 144 ~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~ 217 (283)
T PHA02988 144 KPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT 217 (283)
T ss_pred CCCCcCChhhEEECCCCcEEEcccchHhhhcccc------ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH
Confidence 8899999999999999999999999987543321 2346899999999775 367899999999999999999
Q ss_pred CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 381 GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 381 G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
|..||...........+........ .+..++..+.+++.+||..||++||+++++++.|+++
T Consensus 218 g~~Pf~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 218 GKIPFENLTTKEIYDLIINKNNSLK----------LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCCC----------CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 9999987664333322221111110 0113455689999999999999999999999999875
No 21
>KOG0661|consensus
Probab=100.00 E-value=8.4e-44 Score=345.04 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=203.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLC 248 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~ 248 (455)
+|.+.++||.|+||.||+|+.+ +|..||||+++.+....+ .-.=.+|++.|+++. ||||+++.+.+
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~e------------e~~nLREvksL~kln~hpniikL~Evi 78 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWE------------ECMNLREVKSLRKLNPHPNIIKLKEVI 78 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHH------------HHHHHHHHHHHHhcCCCCcchhhHHHh
Confidence 3455689999999999999976 488999999986543211 122468999999998 99999999987
Q ss_pred cC-c-eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 249 NN-I-MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 249 ~~-~-~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
.+ . .+++||||| ..+|++++... ..++++..+..|+.||+.||+|+|. +|+.|||+||+|||+..+..+||+|
T Consensus 79 ~d~~~~L~fVfE~M-d~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk--~GfFHRDlKPENiLi~~~~~iKiaD 153 (538)
T KOG0661|consen 79 RDNDRILYFVFEFM-DCNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHK--HGFFHRDLKPENILISGNDVIKIAD 153 (538)
T ss_pred hccCceEeeeHHhh-hhhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHh--cCcccccCChhheEecccceeEecc
Confidence 76 4 789999999 68999999876 4589999999999999999999999 8999999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccc--cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--ccc
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEV 402 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~--~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~ 402 (455)
||+||........+ ..+.|..|.|||++ .+.|+.++|+||+|||++|+.+-++.|.+.+.....+++.. +..
T Consensus 154 FGLARev~SkpPYT----eYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP 229 (538)
T KOG0661|consen 154 FGLAREVRSKPPYT----EYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTP 229 (538)
T ss_pred cccccccccCCCcc----hhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCC
Confidence 99999877654332 45789999999955 45678999999999999999999999998886554444433 111
Q ss_pred c---------hhhccchhccCCCh-------hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 P---------VREVLDKEAGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~---------~~~~~d~~~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. +...+.-......+ ..++....+||.+||..||.+||++.|.++
T Consensus 230 ~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 230 DKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred ccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 1 00111111111111 125566778999999999999999999886
No 22
>KOG0659|consensus
Probab=100.00 E-value=2.7e-42 Score=312.54 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=200.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...++||+|.||.||+|++. +|+.||||+++.......- .....+|++.|+.++|+||+.+++.+..
T Consensus 4 Y~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi-----------~~talREIK~Lqel~h~nIi~LiD~F~~ 72 (318)
T KOG0659|consen 4 YEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI-----------NRTALREIKLLQELKHPNIIELIDVFPH 72 (318)
T ss_pred hhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc-----------cHHHHHHHHHHHHccCcchhhhhhhccC
Confidence 455689999999999999975 5899999999865321111 2337799999999999999999998887
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+...||+||| ..+|+..+... ...++..++..++.++++||+|||+ +.|+||||||.|+|++.+|.+||+|||+
T Consensus 73 ~~~l~lVfEfm-~tdLe~vIkd~--~i~l~pa~iK~y~~m~LkGl~y~H~--~~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 73 KSNLSLVFEFM-PTDLEVVIKDK--NIILSPADIKSYMLMTLKGLAYCHS--KWILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred CCceEEEEEec-cccHHHHhccc--ccccCHHHHHHHHHHHHHHHHHHHh--hhhhcccCCccceEEcCCCcEEeecccc
Confidence 8889999999 47899988764 4589999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccc---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVP--- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~--- 403 (455)
|+......... ...+-|..|.|||.+.| .|+..+|+||.|||+.||+-|.+-|.+.++......+.. -..+
T Consensus 148 Ar~f~~p~~~~---~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~ 224 (318)
T KOG0659|consen 148 ARFFGSPNRIQ---THQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPD 224 (318)
T ss_pred hhccCCCCccc---ccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcc
Confidence 99887654322 22378999999996644 589999999999999999999988888764333222222 0101
Q ss_pred -------hhhccchhccCC-----ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -------VREVLDKEAGEW-----NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -------~~~~~d~~~~~~-----~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++++..-..-+. --..++...-+|+.+++..||.+|+++.|+++
T Consensus 225 ~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~ 280 (318)
T KOG0659|consen 225 QWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALK 280 (318)
T ss_pred cCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence 122221111000 01233445678999999999999999999876
No 23
>KOG0605|consensus
Probab=100.00 E-value=1.5e-42 Score=341.29 Aligned_cols=245 Identities=21% Similarity=0.288 Sum_probs=197.9
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++...||+|+||.||+|+.++ |..+|+|++++..-.... .+.....|-.+|....+|+||++|-.+++
T Consensus 144 e~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~----------Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~ 213 (550)
T KOG0605|consen 144 ELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKN----------QVEHVRAERDILAEVDSPWVVKLYYSFQDK 213 (550)
T ss_pred hhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhh----------hHHHHHHHHHHhhhcCCCcEEEEEEEecCC
Confidence 455999999999999999774 899999999876442221 24557889999999999999999998888
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
..+||||||++||++..+|.+ ...|++..+..++.+++.||..||+ .|+|||||||+|+|||..|++||+|||||
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~---~~~L~e~~arfYiaE~vlAI~~iH~--~gyIHRDIKPdNlLiD~~GHiKLSDFGLs 288 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMR---KDTLTEDWARFYIAETVLAIESIHQ--LGYIHRDIKPDNLLIDAKGHIKLSDFGLS 288 (550)
T ss_pred CeeEEEEEecCCccHHHHHHh---cCcCchHHHHHHHHHHHHHHHHHHH--cCcccccCChhheeecCCCCEeecccccc
Confidence 899999999999999999998 4579999999999999999999999 88999999999999999999999999998
Q ss_pred cccccC---------------------Cccee----e-------------------eccCCCCCCCCCcccccC-CCCcc
Q psy5603 331 KMSETS---------------------NMKTM----Y-------------------TENLTGTRPYMPPEAMHC-QISTK 365 (455)
Q Consensus 331 ~~~~~~---------------------~~~~~----~-------------------~~~~~gt~~Y~aPE~~~~-~~~~~ 365 (455)
.-.... ..... . ....+|||.|||||++.+ +++..
T Consensus 289 ~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~ 368 (550)
T KOG0605|consen 289 TGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKE 368 (550)
T ss_pred chhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcc
Confidence 422110 00000 0 012589999999997755 67899
Q ss_pred cchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC
Q psy5603 366 TDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS 441 (455)
Q Consensus 366 sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs 441 (455)
+|+||||||+||||.|.+||...+....+..+......+... ....++....+||.+||. ||++|..
T Consensus 369 cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP--------~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 369 CDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP--------EEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC--------CcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999999999999888887776633222111 112233567888888888 9999965
No 24
>KOG4721|consensus
Probab=100.00 E-value=2.6e-43 Score=346.63 Aligned_cols=235 Identities=30% Similarity=0.512 Sum_probs=197.6
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
+-||.|+.|.||+|+++ ++.||||+++.- -..+|+-|++|+||||+.+.|+|.. ..+|
T Consensus 130 eWlGSGaQGAVF~Grl~-netVAVKKV~el--------------------kETdIKHLRkLkH~NII~FkGVCtqsPcyC 188 (904)
T KOG4721|consen 130 EWLGSGAQGAVFLGRLH-NETVAVKKVREL--------------------KETDIKHLRKLKHPNIITFKGVCTQSPCYC 188 (904)
T ss_pred hhhccCcccceeeeecc-CceehhHHHhhh--------------------hhhhHHHHHhccCcceeeEeeeecCCceeE
Confidence 56999999999999998 599999998521 2368899999999999999999988 8999
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
||||||+.|-|...|.. ..+++......+..+||.|+.|||. +.|||||||+-||||..+..+||+|||-++...
T Consensus 189 IiMEfCa~GqL~~VLka---~~~itp~llv~Wsk~IA~GM~YLH~--hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 189 IIMEFCAQGQLYEVLKA---GRPITPSLLVDWSKGIAGGMNYLHL--HKIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred EeeeccccccHHHHHhc---cCccCHHHHHHHHHHhhhhhHHHHH--hhHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 99999999999999987 4578899999999999999999999 789999999999999999999999999888655
Q ss_pred cCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhcc
Q psy5603 335 TSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAG 413 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 413 (455)
... + .-.+.||.+|||||++.. ..+.|+|||||||||||||||..||.+.+.....+-+ -...+.
T Consensus 264 ~~S--T--kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGV----------GsNsL~ 329 (904)
T KOG4721|consen 264 DKS--T--KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGV----------GSNSLH 329 (904)
T ss_pred hhh--h--hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEec----------cCCccc
Confidence 432 2 335899999999998765 4689999999999999999999999876643222211 111122
Q ss_pred CCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 414 EWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+..++.-++-|+++||.-.|.+||++.+++..|+
T Consensus 330 LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 330 LPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 2234556667888999999999999999999998875
No 25
>KOG0600|consensus
Probab=100.00 E-value=1.8e-42 Score=338.08 Aligned_cols=257 Identities=24% Similarity=0.356 Sum_probs=196.7
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+...+||+|+||.||+|++. +|+.||+|+++.+...... .....+||.||+++.||||++|.+...+
T Consensus 120 eki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~-----------~~t~~REI~ILr~l~HpNIikL~eivt~~ 188 (560)
T KOG0600|consen 120 EKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGF-----------PITAIREIKILRRLDHPNIIKLEEIVTSK 188 (560)
T ss_pred HHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcc-----------hHHHHHHHHHHHhcCCCcccceeeEEEec
Confidence 34488999999999999975 5899999999865431111 2336789999999999999999995433
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..|+|+|||+ -+|.-++... ...+++.++..++.|++.||.|+|+ +||+|||||.+|||||.+|.+||+|||
T Consensus 189 ~~~siYlVFeYMd-hDL~GLl~~p--~vkft~~qIKc~mkQLl~Gl~~cH~--~gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 189 LSGSIYLVFEYMD-HDLSGLLSSP--GVKFTEPQIKCYMKQLLEGLEYCHS--RGVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred CCceEEEEEeccc-chhhhhhcCC--CcccChHHHHHHHHHHHHHHHHHhh--cCeeeccccccceEEcCCCCEEecccc
Confidence 68899999995 5777776642 3469999999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~ 405 (455)
||++........ .+ ..+-|..|.|||++.| .|++++|+||.||||.||++|++.|.+.....-...+.. -..+-.
T Consensus 264 LAr~y~~~~~~~-~T-~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e 341 (560)
T KOG0600|consen 264 LARFYTPSGSAP-YT-SRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTE 341 (560)
T ss_pred ceeeccCCCCcc-cc-cceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCCh
Confidence 999876554222 23 3467999999997765 589999999999999999999999999885544444433 111111
Q ss_pred hccc---------hhcc-CCC------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 EVLD---------KEAG-EWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d---------~~~~-~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++.. .+.. ... ....+...-+|+..+|..||.+|.|+.++++
T Consensus 342 ~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 342 DYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred hccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1111 0000 000 0122334556899999999999999999875
No 26
>KOG0585|consensus
Probab=100.00 E-value=2e-42 Score=335.07 Aligned_cols=262 Identities=22% Similarity=0.319 Sum_probs=206.7
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCC-chhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNS-DNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~-~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
-|++...||+|.||.|-+|... +++.||||++.+......... .......+.++...+|+.||++|+|||||+|+.+.
T Consensus 98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 3567799999999999999976 489999999976543222111 11112234567799999999999999999999988
Q ss_pred cC---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 249 NN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 249 ~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
.+ ...|+|+|||..|.+.. +....+.+++.++++++.++..||.|||. +|||||||||+|+||+++|++||+
T Consensus 178 DDP~s~~~YlVley~s~G~v~w---~p~d~~els~~~Ar~ylrDvv~GLEYLH~--QgiiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKW---CPPDKPELSEQQARKYLRDVVLGLEYLHY--QGIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred cCcccCceEEEEEeccCCcccc---CCCCcccccHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEEcCCCcEEee
Confidence 66 67899999999998743 22223349999999999999999999999 899999999999999999999999
Q ss_pred ecccccccccCCcc--eeeeccCCCCCCCCCcccccCC-----CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhh
Q psy5603 326 DFGIVKMSETSNMK--TMYTENLTGTRPYMPPEAMHCQ-----ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 326 DFGla~~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~~-----~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
|||.+......... ...-....|||+|+|||...++ .+.+.||||+||+||.|+.|+.||.+......+.++.
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIv 332 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIV 332 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHh
Confidence 99998866333211 1122447999999999966442 2558899999999999999999999988877777777
Q ss_pred hcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+....++..- .+...+++||.++|.+||++|.+..+|..
T Consensus 333 n~pL~fP~~p----------e~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 333 NDPLEFPENP----------EINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred cCcccCCCcc----------cccHHHHHHHHHHhhcChhheeehhhhee
Confidence 6554444321 24456899999999999999999988754
No 27
>KOG0597|consensus
Probab=100.00 E-value=1.1e-42 Score=342.34 Aligned_cols=243 Identities=27% Similarity=0.408 Sum_probs=203.6
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
.+.+.||+|+||+||||+.| +.+.||+|.+.+.... ...++.+.+|++|+++++|||||.+++.+..
T Consensus 5 hv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~-----------~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~ 73 (808)
T KOG0597|consen 5 HVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRN-----------EKELKNLRQEVRILRSLKHPNIVEMLESFETS 73 (808)
T ss_pred hHHHHhcCCccceeeecccccceeEEEEEEehhcCCc-----------hHHHHHHHHHHHHHHhcCCcchhhHHHhhccc
Confidence 34478999999999999987 4788999999654331 1125668999999999999999999998888
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.+.|+|.||+.| +|..+|... ..++++++..|+.+++.||.|||+ .+|+|||+||.|||++..|.+|+||||+|
T Consensus 74 ~~~~vVte~a~g-~L~~il~~d---~~lpEe~v~~~a~~LVsaL~yLhs--~rilhrd~kPqniLl~~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 AHLWVVTEYAVG-DLFTILEQD---GKLPEEQVRAIAYDLVSALYYLHS--NRILHRDMKPQNILLEKGGTLKLCDFGLA 147 (808)
T ss_pred ceEEEEehhhhh-hHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHh--cCcccccCCcceeeecCCCceeechhhhh
Confidence 889999999976 999999874 459999999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+....+ +...+.+.|||-|||||+..+ .++..+|.||+||++||+.+|++||...........+..+...
T Consensus 148 r~m~~~---t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~------ 218 (808)
T KOG0597|consen 148 RAMSTN---TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK------ 218 (808)
T ss_pred hhcccC---ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC------
Confidence 977653 344567899999999997655 5788999999999999999999999977644443333322222
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++..++..+.+|+...+.+||.+|.++.+++.
T Consensus 219 ------~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 219 ------PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ------CcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 12356677899999999999999999998864
No 28
>KOG0694|consensus
Probab=100.00 E-value=1.7e-42 Score=349.61 Aligned_cols=238 Identities=25% Similarity=0.349 Sum_probs=200.6
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 250 (455)
+.+.||+|+||+|+++..++ ++.+|||++++......+. ......|..|+... +||.++.++..++.
T Consensus 372 ~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~----------Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~ 441 (694)
T KOG0694|consen 372 LLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDE----------VESLMCEKRIFELANRHPFLVNLFSCFQTK 441 (694)
T ss_pred EEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecccc----------HHHHHHHHHHHHHhccCCeEeecccccccC
Confidence 44899999999999999884 7889999999887654432 44567788877666 69999999999988
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.+.|+||||+.||++..+.+ ...+++..+..++..++.||+|||+ +||||||||.+|||||.+|++||+|||++
T Consensus 442 ~~l~fvmey~~Ggdm~~~~~----~~~F~e~rarfyaAev~l~L~fLH~--~~IIYRDlKLdNiLLD~eGh~kiADFGlc 515 (694)
T KOG0694|consen 442 EHLFFVMEYVAGGDLMHHIH----TDVFSEPRARFYAAEVVLGLQFLHE--NGIIYRDLKLDNLLLDTEGHVKIADFGLC 515 (694)
T ss_pred CeEEEEEEecCCCcEEEEEe----cccccHHHHHHHHHHHHHHHHHHHh--cCceeeecchhheEEcccCcEEecccccc
Confidence 89999999999999544433 3469999999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+..-... ..+++++||+.|||||++.+ .|+.++|+|||||+|||||.|+.||.+++.......+...+..++..+
T Consensus 516 Ke~m~~g---~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~l- 591 (694)
T KOG0694|consen 516 KEGMGQG---DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFL- 591 (694)
T ss_pred cccCCCC---CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcc-
Confidence 8654332 24678999999999997755 689999999999999999999999999998877777766555554443
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
+.....++.+++..+|++|.-+
T Consensus 592 -----------s~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 592 -----------SKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred -----------cHHHHHHHHHHhccCcccccCC
Confidence 3346677889999999999766
No 29
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=6.5e-42 Score=338.25 Aligned_cols=242 Identities=23% Similarity=0.359 Sum_probs=194.1
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||||+++...... ......+.+|+.++++++||||+++++++.+ ...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~ 70 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIA----------KDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRL 70 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEE
Confidence 36999999999999976 58899999997532210 1113457889999999999999999998776 788
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~ 145 (323)
T cd05571 71 CFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALGYLHS--CDVVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEeeCCCCccc
Confidence 999999999999999876 3468999999999999999999999 88999999999999999999999999998753
Q ss_pred ccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||++.+ .++.++|||||||++|||+||..||...+.......+......++
T Consensus 146 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p------- 215 (323)
T cd05571 146 ISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP------- 215 (323)
T ss_pred ccCC---CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC-------
Confidence 2221 11234679999999997654 578999999999999999999999987654333332222222221
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.+||.+||..||++|| ++.++++
T Consensus 216 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 216 -----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred -----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 12344578899999999999999 7888764
No 30
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.3e-42 Score=332.49 Aligned_cols=243 Identities=26% Similarity=0.385 Sum_probs=196.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+ +++.||||++....... ......+.+|+.++++++||||+++++++.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 72 (291)
T cd05612 3 LERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIR----------LKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD 72 (291)
T ss_pred ceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh----------hHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc
Confidence 455689999999999999987 48899999986432100 0114458899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ +|++||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~NIli~~~~~~kl~Dfg~ 147 (291)
T cd05612 73 QRFLYMLMEYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHS--KEIVYRDLKPENILLDKEGHIKLTDFGF 147 (291)
T ss_pred CCeEEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEEecCc
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++..... .....||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......++.
T Consensus 148 ~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-- 219 (291)
T cd05612 148 AKKLRDR------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR-- 219 (291)
T ss_pred chhccCC------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc--
Confidence 8765332 123579999999997654 5788999999999999999999999877644433333322222211
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
..+..+.+||.+|+..||.+||+ +.++++
T Consensus 220 ----------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 220 ----------HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ----------cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 12345888999999999999995 777664
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=5.1e-42 Score=339.95 Aligned_cols=242 Identities=24% Similarity=0.364 Sum_probs=195.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++ +++.||||+++...... ......+.+|+.++++++||||+++++++.+
T Consensus 20 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 89 (329)
T PTZ00263 20 FEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK----------MKQVQHVAQEKSILMELSHPFIVNMMCSFQD 89 (329)
T ss_pred eEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----------hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc
Confidence 455689999999999999986 47899999997532111 1114558899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 90 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~ 164 (329)
T PTZ00263 90 ENRVYFLLEFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHS--KDIIYRDLKPENLLLDNKGHVKVTDFGF 164 (329)
T ss_pred CCEEEEEEcCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHEEECCCCCEEEeeccC
Confidence 8889999999999999999863 458999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... ....||+.|+|||++.+ .++.++|||||||++|||++|..||.+.........+......++..
T Consensus 165 ~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~- 237 (329)
T PTZ00263 165 AKKVPDRT------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNW- 237 (329)
T ss_pred ceEcCCCc------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCC-
Confidence 87653321 23579999999997654 57889999999999999999999998766443333332222222211
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIV 446 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl 446 (455)
++..+.+||.+||..||++||+ +++++
T Consensus 238 -----------~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll 269 (329)
T PTZ00263 238 -----------FDGRARDLVKGLLQTDHTKRLGTLKGGVADVK 269 (329)
T ss_pred -----------CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 2345788999999999999996 56665
No 32
>KOG0580|consensus
Probab=100.00 E-value=2e-42 Score=309.12 Aligned_cols=245 Identities=26% Similarity=0.419 Sum_probs=207.5
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++++.||+|-||.||+|+.+ ++..||+|++.+...... -...++.+|++|-+.++||||+++|+++.+
T Consensus 25 eigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~----------~v~~qlrREiEIqs~L~hpnilrlY~~fhd~ 94 (281)
T KOG0580|consen 25 EIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKT----------QVEHQLRREIEIQSHLRHPNILRLYGYFHDS 94 (281)
T ss_pred cccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHh----------cchhhhhheeEeecccCCccHHhhhhheecc
Confidence 45699999999999999976 477899999986553221 124668999999999999999999999888
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...||++||.++|+|...|.... ...+++.....++.|+|.|+.|+|. +++|||||||+|+|++..+..||+|||-+
T Consensus 95 ~riyLilEya~~gel~k~L~~~~-~~~f~e~~~a~Yi~q~A~Al~y~h~--k~VIhRdiKpenlLlg~~~~lkiAdfGws 171 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGR-MKRFDEQRAATYIKQLANALLYCHL--KRVIHRDIKPENLLLGSAGELKIADFGWS 171 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcc-cccccccchhHHHHHHHHHHHHhcc--CCcccCCCCHHHhccCCCCCeeccCCCce
Confidence 88899999999999999998543 4568999999999999999999999 89999999999999999999999999988
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...+.+. ....+||..|+|||...+ ..+..+|+|++|++.||++.|.+||........+..+..-...++.
T Consensus 172 V~~p~~k-----R~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~--- 243 (281)
T KOG0580|consen 172 VHAPSNK-----RKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPS--- 243 (281)
T ss_pred eecCCCC-----ceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCc---
Confidence 7665332 345799999999997766 5688999999999999999999999988866666655543333332
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.++...++||.+|+..+|.+|.+..||++
T Consensus 244 ---------~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 244 ---------TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ---------ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 34455889999999999999999999876
No 33
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.5e-42 Score=335.77 Aligned_cols=238 Identities=23% Similarity=0.300 Sum_probs=190.0
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||+|.++ +++.||+|+++...... ......+.+|+.++.+++||||+++++++.+ ...|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 70 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVS----------RSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYL 70 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEE
Confidence 799999999999986 47889999986432111 1114557889999999999999999998776 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 71 v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 145 (312)
T cd05585 71 VLAFINGGELFHHLQRE---GRFDLSRARFYTAELLCALENLHK--FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMK 145 (312)
T ss_pred EEcCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHeEECCCCcEEEEECcccccCcc
Confidence 99999999999999763 458999999999999999999999 8899999999999999999999999999875432
Q ss_pred CCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccC
Q psy5603 336 SNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. .......||+.|+|||++.+ .++.++|||||||++|||+||..||...........+......++
T Consensus 146 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~--------- 213 (312)
T cd05585 146 DD---DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP--------- 213 (312)
T ss_pred CC---CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC---------
Confidence 21 12345679999999997644 578899999999999999999999987654333332222221111
Q ss_pred CChhHHHHHHHHHHHhhhccCcCCCCCHHHH
Q psy5603 415 WNETHVETLISIVFEKCCVFEKDKRASMRDI 445 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ev 445 (455)
..++..+.+||.+||..||++||+...+
T Consensus 214 ---~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 214 ---DGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred ---CcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 2234558899999999999999864333
No 34
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.2e-41 Score=343.33 Aligned_cols=257 Identities=27% Similarity=0.463 Sum_probs=197.2
Q ss_pred CcCCCccCcCCCeEEEEEEE------cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKL------KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 244 (455)
+++++.||+|+||.||+|++ .++..||||+++..... . ....+.+|+.++..+ +||||+++
T Consensus 37 ~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~-----~-------~~~~~~~Ei~il~~l~~HpnIv~l 104 (375)
T cd05104 37 LSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL-----T-------EREALMSELKVLSYLGNHINIVNL 104 (375)
T ss_pred eehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc-----H-------HHHHHHHHHHHHHHhcCCcceeee
Confidence 34568999999999999974 23568999998643210 1 134588999999999 89999999
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcCC-------------------------------------------------
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVNN------------------------------------------------- 274 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------- 274 (455)
+++|.+ ...++||||+++|+|.+++.....
T Consensus 105 ~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 184 (375)
T cd05104 105 LGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKAD 184 (375)
T ss_pred eeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccc
Confidence 998877 788999999999999999865321
Q ss_pred -----------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 275 -----------------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 275 -----------------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~ 262 (375)
T cd05104 185 KRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS--KNCIHRDLAARNILLTHGRITKICDFGLAR 262 (375)
T ss_pred cccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCchhhEEEECCCcEEEecCccce
Confidence 1257889999999999999999999 889999999999999999999999999988
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
......... ......++..|+|||.+ .+.++.++|||||||++|||++ |..||..................
T Consensus 263 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~------ 335 (375)
T cd05104 263 DIRNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR------ 335 (375)
T ss_pred eccCccccc-ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc------
Confidence 654332111 12233456789999966 4467899999999999999998 99999765432211111111100
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
...+...+..+.+|+.+||..||++||++.+|++.|++.+
T Consensus 336 ----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 336 ----MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred ----CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 0011122445889999999999999999999999999764
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.6e-41 Score=330.77 Aligned_cols=262 Identities=28% Similarity=0.382 Sum_probs=196.7
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC-----------------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHH
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN-----------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
.|++.++||+|+||.||+|.+++ +..||+|.+..... . .....|.+|+.++
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l 73 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDAN------K------NARNDFLKEVKIL 73 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCC------H------HHHHHHHHHHHHH
Confidence 35667899999999999998642 33699999864321 1 1145688999999
Q ss_pred hhCCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcC----------------CCCCCCHHHHHHHHHHHHHHHHH
Q psy5603 234 SQCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVN----------------NTPPLDSNKRYSIALGVAEALHY 296 (455)
Q Consensus 234 ~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~i~~gl~~ 296 (455)
.+++||||+++++++.+ ...|+||||+++|+|.+++.... ....+++..++.++.|++.||.|
T Consensus 74 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 153 (304)
T cd05096 74 SRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKY 153 (304)
T ss_pred hhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 99999999999998877 78899999999999999986532 12357889999999999999999
Q ss_pred HHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHH
Q psy5603 297 LHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVIL 375 (455)
Q Consensus 297 LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl 375 (455)
||+ .+|+||||||+|||++.++.+||+|||+++....... ........++..|+|||.+ .+.++.++||||||+++
T Consensus 154 lH~--~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l 230 (304)
T cd05096 154 LSS--LNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY-YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL 230 (304)
T ss_pred HHH--CCccccCcchhheEEcCCccEEECCCccceecccCce-eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence 999 8899999999999999999999999999876543321 1123345668899999965 55789999999999999
Q ss_pred HHHHc--CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 376 LELLT--GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 376 ~ellt--G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
|||++ +..||............... ..... .......+..++..+.+++.+|+..+|++||++.+|.+.|++
T Consensus 231 ~el~~~~~~~p~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 231 WEILMLCKEQPYGELTDEQVIENAGEF---FRDQG-RQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred HHHHHccCCCCCCcCCHHHHHHHHHHH---hhhcc-ccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 99987 66788765432211111100 00000 000000112344568899999999999999999999998864
No 36
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.2e-41 Score=333.32 Aligned_cols=242 Identities=23% Similarity=0.367 Sum_probs=193.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||+|+++...... ......+.+|++++++++||||+++++++.. ...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~ 70 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA----------KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRL 70 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEE
Confidence 36999999999999976 48999999997543211 1114457889999999999999999997766 788
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~E~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 145 (323)
T cd05595 71 CFVMEYANGGELFFHLSRE---RVFTEERARFYGAEIVSALEYLHS--RDVVYRDIKLENLMLDKDGHIKITDFGLCKEG 145 (323)
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEEcCCCCEEecccHHhccc
Confidence 9999999999999988763 468999999999999999999999 88999999999999999999999999998753
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||.+. +.++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p------- 215 (323)
T cd05595 146 ISDG---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP------- 215 (323)
T ss_pred cCCC---CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC-------
Confidence 2221 1123467999999999764 4678999999999999999999999987654333322222222221
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.++|.+||..||++|| ++.++++
T Consensus 216 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 216 -----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred -----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 12344578899999999999998 7877764
No 37
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-41 Score=334.95 Aligned_cols=242 Identities=24% Similarity=0.377 Sum_probs=193.4
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||||++....... ......+.+|++++++++||||+++++++.+ ...
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 70 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA----------KDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRL 70 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEE
Confidence 36999999999999976 48899999997543211 1114568889999999999999999998776 788
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++.++..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~Ey~~~g~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~ 145 (328)
T cd05593 71 CFVMEYVNGGELFFHLSR---ERVFSEDRTRFYGAEIVSALDYLHS--GKIVYRDLKLENLMLDKDGHIKITDFGLCKEG 145 (328)
T ss_pred EEEEeCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeEecccCHHHeEECCCCcEEEecCcCCccC
Confidence 999999999999998876 3468999999999999999999999 88999999999999999999999999998753
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......||+.|+|||.+. ..++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p------- 215 (328)
T cd05593 146 ITDA---ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP------- 215 (328)
T ss_pred CCcc---cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC-------
Confidence 3221 1123467999999999764 4678999999999999999999999987654332222221222111
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..++..+.+||.+||..||++|| ++.++++
T Consensus 216 -----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 216 -----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred -----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence 12344578899999999999997 7888865
No 38
>KOG1026|consensus
Probab=100.00 E-value=2.9e-42 Score=356.30 Aligned_cols=253 Identities=29% Similarity=0.474 Sum_probs=208.6
Q ss_pred CCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 175 GNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+.||+|+||+||+|+.. +.+.||||.++..+.. ...+.|++|++.+..++|||||+++|.|
T Consensus 491 ~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~------------~~~~dF~REaeLla~l~H~nIVrLlGVC 558 (774)
T KOG1026|consen 491 KEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN------------QARQDFRREAELLAELQHPNIVRLLGVC 558 (774)
T ss_pred hhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH------------HHHHHHHHHHHHHHhccCCCeEEEEEEE
Confidence 377999999999999853 2467999999865431 1256699999999999999999999999
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNN-----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl 316 (455)
.+ +.+|+|+|||..|+|.++|..... .++|+..+.+.||.|||.|+.||-+ +.+|||||-..|+||
T Consensus 559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~--~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS--HHFVHRDLATRNCLV 636 (774)
T ss_pred ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh--Ccccccchhhhhcee
Confidence 88 777999999999999999975321 2348999999999999999999999 789999999999999
Q ss_pred cCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcc-cccCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhH
Q psy5603 317 DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYY 394 (455)
Q Consensus 317 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~ 394 (455)
+++..+||+|||++|.....+..... ..-.-..+||||| ++.+++|++||||||||||||++| |+.||.+....++.
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk~~-~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI 715 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYKVR-GNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI 715 (774)
T ss_pred ccceEEEecccccchhhhhhhhhccc-CCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH
Confidence 99999999999999987765543311 1122345799999 778999999999999999999999 99999988765554
Q ss_pred HHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 395 YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 395 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..+.. -..++.++..+..|+..||+..|++||+++||-.+|+...
T Consensus 716 e~i~~g~l-----------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 716 ECIRAGQL-----------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred HHHHcCCc-----------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 44433221 1124566777889999999999999999999999998753
No 39
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.6e-41 Score=326.94 Aligned_cols=250 Identities=20% Similarity=0.258 Sum_probs=193.9
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||.||+|.+. +|+.||||.+........ .....+.+|+.++++++|+||+++++++.+
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~ 72 (285)
T cd05631 3 RHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGEAMALNEKRILEKVNSRFVVSLAYAYETK 72 (285)
T ss_pred eEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhh----------hhHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 44588999999999999875 589999999865432110 012347889999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+|||+++++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nill~~~~~~kl~Dfg~~ 149 (285)
T cd05631 73 DALCLVLTIMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQR--ERIVYRDLKPENILLDDRGHIRISDLGLA 149 (285)
T ss_pred CeEEEEEEecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 78899999999999998886533 3468999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... ......||..|+|||++. ..++.++|||||||++|||++|..||..................
T Consensus 150 ~~~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~------ 219 (285)
T cd05631 150 VQIPEGE----TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE------ 219 (285)
T ss_pred EEcCCCC----eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc------
Confidence 7653322 123457999999999764 46889999999999999999999999876532111111100000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
.. ......++..+.+|+.+||..||++||+ ++++++
T Consensus 220 ~~--~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 220 DQ--EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred cc--ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00 0011224456888999999999999997 777765
No 40
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.9e-41 Score=337.20 Aligned_cols=242 Identities=24% Similarity=0.361 Sum_probs=195.1
Q ss_pred cCCCccCcCCCeEEEEEEEcC--CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.+.+.||+|+||.||+|.+++ +..||+|++....... ......+.+|+.+++.++||||+++++++.+
T Consensus 33 ~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 102 (340)
T PTZ00426 33 NFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK----------QKQVDHVFSERKILNYINHPFCVNLYGSFKD 102 (340)
T ss_pred EEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhh----------hhhHHHHHHHHHHHHhCCCCCCcceEEEEEe
Confidence 445889999999999998653 3689999986432211 1113458899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 103 ~~~~~lv~Ey~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~ikL~DFG~ 177 (340)
T PTZ00426 103 ESYLYLVLEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFEYLQS--LNIVYRDLKPENLLLDKDGFIKMTDFGF 177 (340)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEecCCC
Confidence 7889999999999999999863 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++..... .....||+.|+|||++.+ .++.++|||||||++|||++|.+||...+.......+......++.
T Consensus 178 a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~-- 249 (340)
T PTZ00426 178 AKVVDTR------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK-- 249 (340)
T ss_pred CeecCCC------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC--
Confidence 8765321 224579999999997654 5788999999999999999999999887654444433322222221
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.++..+.++|.+|+..+|++|+ +++++++
T Consensus 250 ----------~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 250 ----------FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ----------CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1234478899999999999995 7888765
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=7.8e-41 Score=321.11 Aligned_cols=253 Identities=26% Similarity=0.388 Sum_probs=198.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+++.+.||+|+||.||+|.++ .+..||+|.++.... . .....|.+|+.++.+++||||++++++
T Consensus 7 ~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~iv~~~~~ 74 (266)
T cd05064 7 IKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS------D------KQRRGFLAEALTLGQFDHSNIVRLEGV 74 (266)
T ss_pred eEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC------H------HHHHHHHHHHHHHhcCCCCCcCeEEEE
Confidence 355689999999999999864 256899999864321 1 113458899999999999999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.. ...|+||||+++|+|.+++.... ..+++.+++.++.|++.||+|||+ ++++||||||+|||++.++.+|++|
T Consensus 75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~--~~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 75 ITRGNTMMIVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSE--MGYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred EecCCCcEEEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEeeccccHhhEEEcCCCcEEECC
Confidence 766 78899999999999999987643 368999999999999999999999 8899999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccch
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||.+........ .......++..|+|||.+ .+.++.++|||||||++||+++ |..||............... ...
T Consensus 151 fg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~ 227 (266)
T cd05064 151 FRRLQEDKSEAI--YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-FRL 227 (266)
T ss_pred Ccccccccccch--hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-CCC
Confidence 998765432211 111223456789999965 4567899999999999999875 99999876543322222111 000
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..++..+.+++.+||..+|.+||++.++.+.|.+++
T Consensus 228 ----------~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 228 ----------PAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred ----------CCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 012234556888999999999999999999999998763
No 42
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.4e-41 Score=338.30 Aligned_cols=256 Identities=28% Similarity=0.469 Sum_probs=197.4
Q ss_pred cCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeec
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLL 245 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 245 (455)
++++.||+|+||.||+|.+. ++..||||+++.... .+ ....+.+|+.+++.+ +|+||++++
T Consensus 41 ~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~~------~~~~~~~E~~il~~l~~h~nIv~~~ 108 (374)
T cd05106 41 QFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH------TD------EREALMSELKILSHLGQHKNIVNLL 108 (374)
T ss_pred eehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC------HH------HHHHHHHHHHHHHhhccCCceeeEe
Confidence 45589999999999999853 235799999964322 10 134588999999999 899999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhcCC--------------------------------------------------
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------------------------------------------- 274 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------------------------------------------- 274 (455)
++|.. ...|+||||+++|+|.+++.....
T Consensus 109 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (374)
T cd05106 109 GACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVS 188 (374)
T ss_pred eEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcc
Confidence 98877 788999999999999999864211
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCC
Q psy5603 275 -----------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 337 (455)
Q Consensus 275 -----------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 337 (455)
..++++.+++.++.|++.||.|||+ ++++||||||+|||+++++.+||+|||+++......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~--~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~ 266 (374)
T cd05106 189 SSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS--KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS 266 (374)
T ss_pred ccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc
Confidence 1357889999999999999999999 889999999999999999999999999987654332
Q ss_pred cceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhccCC
Q psy5603 338 MKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEW 415 (455)
Q Consensus 338 ~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 415 (455)
.. .......++..|+|||++ .+.++.++|||||||++|||++ |..||.................. ..
T Consensus 267 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~----------~~ 335 (374)
T cd05106 267 NY-VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ----------MS 335 (374)
T ss_pred ce-eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC----------cc
Confidence 11 112233456789999965 4568999999999999999997 99999865432211111111100 00
Q ss_pred ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 416 NETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 416 ~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.+...+..+.+++.+|+..+|++||++.+|++.|++++
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 01123455888999999999999999999999999876
No 43
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.8e-41 Score=334.09 Aligned_cols=251 Identities=23% Similarity=0.294 Sum_probs=198.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++. ++.||||+++...... ......+.+|++++.+++||||+++++++.+
T Consensus 3 y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~ 72 (333)
T cd05600 3 FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFK----------LNEVRHVLTERDILTTTKSEWLVKLLYAFQD 72 (333)
T ss_pred cEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhh----------hhHHHHHHHHHHHHHhCCCCCCccEEEEEEc
Confidence 4566899999999999999874 7899999997542210 1114558899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++.. ...+++.++..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kL~Dfg~ 147 (333)
T cd05600 73 DEYLYLAMEYVPGGDFRTLLNN---LGVLSEDHARFYMAEMFEAVDALHE--LGYIHRDLKPENFLIDASGHIKLTDFGL 147 (333)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEEEeCcC
Confidence 788999999999999999976 3468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++.... ......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......+.
T Consensus 148 a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~--- 218 (333)
T cd05600 148 SKGIVT------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQ--- 218 (333)
T ss_pred Cccccc------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhcccccc---
Confidence 875433 1234689999999997644 678899999999999999999999987664333222221111100
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......+...++..+.++|.+|+..+|.+||++.++++
T Consensus 219 -~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~ 256 (333)
T cd05600 219 -RPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKN 256 (333)
T ss_pred -CCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHh
Confidence 00000001234556788999999988999999999985
No 44
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=7.5e-41 Score=324.44 Aligned_cols=258 Identities=20% Similarity=0.237 Sum_probs=194.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+++ +++.||||+++...... .....+.+|++++++++||||+++++++..
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (287)
T cd07848 3 FEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-----------EVKETTLRELKMLRTLKQENIVELKEAFRR 71 (287)
T ss_pred ceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc-----------cchhhHHHHHHHHHhCCCccccchhhhEec
Confidence 556689999999999999987 47889999997542211 113457889999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||++++++..+... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 72 RGKLYLVFEYVEKNMLELLEEM---PNGVPPEKVRSYIYQLIKAIHWCHK--NDIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred CCEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 888999999998877655433 2468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cccch--
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVPV-- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~~-- 404 (455)
++....... .......||+.|+|||++. ..++.++|+|||||++|||++|.+||...+.......+.. ...+.
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T cd07848 147 ARNLSEGSN--ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQ 224 (287)
T ss_pred ccccccccc--ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHH
Confidence 886543221 1123457899999999664 4678899999999999999999999987653221111111 00000
Q ss_pred ----------hhccchhccC------CChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 ----------REVLDKEAGE------WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ----------~~~~d~~~~~------~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+.... .....++..+.+|+.+|+..||++||+++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 225 MKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred HHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 001124567899999999999999999999875
No 45
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=5.8e-41 Score=332.86 Aligned_cols=259 Identities=19% Similarity=0.337 Sum_probs=192.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|.++ +|..||||++....... . ....+.+|+.++++++||||+++++++..
T Consensus 2 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~-------~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 70 (338)
T cd07859 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHV----S-------DATRILREIKLLRLLRHPDIVEIKHIMLP 70 (338)
T ss_pred eEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccc----h-------hHHHHHHHHHHHHhCCCCCEeeecceEec
Confidence 566789999999999999976 48999999986432110 0 13457899999999999999999997632
Q ss_pred ------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 251 ------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
...|+||||+ +++|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||
T Consensus 71 ~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~NIll~~~~~~kL 144 (338)
T cd07859 71 PSRREFKDIYVVFELM-ESDLHQVIKA---NDDLTPEHHQFFLYQLLRALKYIHT--ANVFHRDLKPKNILANADCKLKI 144 (338)
T ss_pred cCCCCCceEEEEEecC-CCCHHHHHHh---cccCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEE
Confidence 2479999999 5799998876 3468999999999999999999999 88999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCccccc---CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
+|||+++................||+.|+|||++. ..++.++|||||||++|||+||.+||.............. .
T Consensus 145 ~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~ 224 (338)
T cd07859 145 CDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLL 224 (338)
T ss_pred ccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHh
Confidence 99999986543222222223467999999999764 3578899999999999999999999987653211111100 0
Q ss_pred ccchh------------hccch----hccCCC--hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVR------------EVLDK----EAGEWN--ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~------------~~~d~----~~~~~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+.. ..+.. ...... ...++..+.+++.+||..+|++||++.++++
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 225 GTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred CCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 00000 000000 0123345778999999999999999999975
No 46
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=9.7e-41 Score=324.40 Aligned_cols=260 Identities=23% Similarity=0.307 Sum_probs=195.6
Q ss_pred CCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 168 RKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 168 ~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
....|++.++||+|+||.||+|..+ ++..||+|+++....... ...+.+|+.++++++||||+++++
T Consensus 3 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~niv~~~~ 70 (288)
T cd07871 3 KLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------PCTAIREVSLLKNLKHANIVTLHD 70 (288)
T ss_pred ccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCc------------chhHHHHHHHHHhCCCCCEeeEEE
Confidence 3445677799999999999999976 478999999864321100 223678999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
++.+ ...++||||+. |+|.+++.... ..+++..+..++.|++.||+|||+ +||+||||||+|||++.++.+||+
T Consensus 71 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~ 145 (288)
T cd07871 71 IIHTERCLTLVFEYLD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHK--RKILHRDLKPQNLLINEKGELKLA 145 (288)
T ss_pred EEcCCCeEEEEEeCCC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEC
Confidence 8776 77899999996 59999887543 357899999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-ccc
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~ 402 (455)
|||+++...... .......||+.|+|||.+.+ .++.++|||||||++|||+||.+||...+.......+.. ...
T Consensus 146 DfG~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 222 (288)
T cd07871 146 DFGLARAKSVPT---KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGT 222 (288)
T ss_pred cCcceeeccCCC---ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 999987543321 11234578999999997643 478899999999999999999999987653322221111 000
Q ss_pred chh----h---------ccchhcc--CC--ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVR----E---------VLDKEAG--EW--NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~----~---------~~d~~~~--~~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.. . ...+... .+ ....++....+||.+|+..||.+|||++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 223 PTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred CChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0 0000000 00 00123456788999999999999999999874
No 47
>KOG0611|consensus
Probab=100.00 E-value=1.9e-41 Score=322.10 Aligned_cols=248 Identities=24% Similarity=0.416 Sum_probs=205.7
Q ss_pred CCCCcCCCccCcCCCeEEEEEEE-cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 169 KPYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
.-+|++.+.||+|+||.|-+|.. +.|+.||||.++++..... + ....+.+|++|++.++||||+.+|.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkde------q----DlvhIRREIeIMSsLNHPhII~IyEV 121 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDE------Q----DLVHIRREIEIMSSLNHPHIIQIYEV 121 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccH------H----HHHHHHHHHHHHhhcCCCceeehhhh
Confidence 34456668999999999999986 5699999999987655221 1 14558899999999999999999999
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
|.+ +...+||||..+|.|+|++...+ .+++.....++.||..|+.|+|. ++++|||||.+|||||.++.+||+|
T Consensus 122 FENkdKIvivMEYaS~GeLYDYiSer~---~LsErEaRhfFRQIvSAVhYCHk--nrVvHRDLKLENILLD~N~NiKIAD 196 (668)
T KOG0611|consen 122 FENKDKIVIVMEYASGGELYDYISERG---SLSEREARHFFRQIVSAVHYCHK--NRVVHRDLKLENILLDQNNNIKIAD 196 (668)
T ss_pred hcCCceEEEEEEecCCccHHHHHHHhc---cccHHHHHHHHHHHHHHHHHHhh--ccceecccchhheeecCCCCeeeec
Confidence 988 88899999999999999999844 59999999999999999999999 7899999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccCCC--CcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQI--STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||++........ -.+++|++-|.+||+.+|.. .+.+|.|||||+||.|..|..||++.+...+...+..+.
T Consensus 197 FGLSNly~~~kf----LqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~Ga--- 269 (668)
T KOG0611|consen 197 FGLSNLYADKKF----LQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGA--- 269 (668)
T ss_pred cchhhhhccccH----HHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccc---
Confidence 999987765542 35689999999999988864 679999999999999999999999987544443333211
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+ .+..-+....-||..||..+|++|.++.+|...
T Consensus 270 --Y--------rEP~~PSdA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 270 --Y--------REPETPSDASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred --c--------cCCCCCchHHHHHHHHHhcCcccchhHHHHhhh
Confidence 1 111112235556889999999999999998753
No 48
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=7.1e-41 Score=330.88 Aligned_cols=243 Identities=23% Similarity=0.311 Sum_probs=191.8
Q ss_pred CccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 176 NKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||++... +++.||||+++....... ......+.+|+.++++++||||+++++++..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~---------~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~ 72 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRN---------QKDTAHTKAERNILEAVKHPFIVDLIYAFQTG 72 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhh---------hhhHHHHHHHHHHHHhCCCCchhceeeEEecC
Confidence 67999999999999863 478899999975322110 1113457889999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 73 GKLYLILEYLSGGELFMHLER---EGIFMEDTACFYLSEISLALEHLHQ--QGIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred CeEEEEEeCCCCchHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 788999999999999999976 3468899999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+...... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......++.
T Consensus 148 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~--- 221 (323)
T cd05584 148 KESIHEG---TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP--- 221 (323)
T ss_pred eecccCC---CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---
Confidence 7543222 11234579999999997654 5788999999999999999999999876643322222222211111
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.++..+.++|.+|+..+|++|| ++.++++
T Consensus 222 ---------~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 222 ---------YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred ---------CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 2334578899999999999999 7777754
No 49
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=3.1e-40 Score=315.12 Aligned_cols=249 Identities=24% Similarity=0.341 Sum_probs=196.8
Q ss_pred ccCcCCCeEEEEEEEc---CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCcee
Q psy5603 177 KLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMN 253 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 253 (455)
.||+|+||.||+|.++ ++..||+|+++..... ......+.+|+.+++++.||||+++++++.+...
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 70 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND-----------PALKDELLREANVMQQLDNPYIVRMIGICEAESW 70 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc-----------HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCc
Confidence 5899999999999753 4688999998643210 0124568899999999999999999999888888
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+||++++++.+||+|||+++..
T Consensus 71 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~ 145 (257)
T cd05116 71 MLVMELAELGPLNKFLQKN---KHVTEKNITELVHQVSMGMKYLEE--TNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 145 (257)
T ss_pred EEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchhhEEEcCCCeEEECCCcccccc
Confidence 9999999999999999763 358999999999999999999999 88999999999999999999999999998865
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..............++..|+|||.+. +.++.++|+|||||++|||++ |..||...........+..... ..
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~--~~----- 218 (257)
T cd05116 146 GADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER--ME----- 218 (257)
T ss_pred CCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC--CC-----
Confidence 44332111122234567899999664 457889999999999999998 9999987654332222221110 00
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
.+..++..+.++|.+||..+|++||++.+|.+.|++.
T Consensus 219 ----~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 219 ----CPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred ----CCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 1112445688999999999999999999999999875
No 50
>KOG0194|consensus
Probab=100.00 E-value=2.1e-41 Score=339.51 Aligned_cols=253 Identities=30% Similarity=0.421 Sum_probs=203.0
Q ss_pred CCccCcCCCeEEEEEEEcC--C--cE-EEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 175 GNKLGEGQFGTVYYGKLKN--G--ME-IAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~--~--~~-vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
+++||+|+||.||+|+++. + .. ||||..+.... .....+..|.+|.+++++++|||||++||++.
T Consensus 162 ~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~----------~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~ 231 (474)
T KOG0194|consen 162 GKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSE----------LTKEQIKEFMKEARVMRQLNHPNVVRFYGVAV 231 (474)
T ss_pred cceeecccccEEEEEEEEecCCceeeeeEEEeeccccc----------ccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 4889999999999999763 2 23 89999874221 12334778999999999999999999999887
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ..+++|||+|.||+|.++|....+ .++..++..++.++|.||+|||+ +++|||||-..|+|++.++.+||+|||
T Consensus 232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~--k~~IHRDIAARNcL~~~~~~vKISDFG 307 (474)
T KOG0194|consen 232 LEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHS--KNCIHRDIAARNCLYSKKGVVKISDFG 307 (474)
T ss_pred CCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHH--CCCcchhHhHHHheecCCCeEEeCccc
Confidence 7 777899999999999999998543 59999999999999999999999 899999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+++........ ...-.-...|+|||.+ .+.++.++|||||||++||+++ |..||.+.........+.....+.
T Consensus 308 Ls~~~~~~~~~---~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~-- 382 (474)
T KOG0194|consen 308 LSRAGSQYVMK---KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM-- 382 (474)
T ss_pred cccCCcceeec---cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC--
Confidence 98865421111 1111334679999965 5578999999999999999999 899999987654444442221111
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+...+..+..++.+||..+|++||+|.++.+.|+.+.+
T Consensus 383 --------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 383 --------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEK 422 (474)
T ss_pred --------CCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHh
Confidence 1112345567788889999999999999999999988754
No 51
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.6e-40 Score=327.13 Aligned_cols=254 Identities=24% Similarity=0.391 Sum_probs=197.9
Q ss_pred cCCCccCcCCCeEEEEEEEcC-Cc----EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+..+.||+|+||.||+|.+.. +. .||||+++.... ......+.+|+.+++.++||||++++|+
T Consensus 10 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~niv~~~g~ 77 (316)
T cd05108 10 KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS------------PKANKEILDEAYVMASVDNPHVCRLLGI 77 (316)
T ss_pred eeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCC------------HHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 445899999999999998742 33 489999863211 0113458899999999999999999999
Q ss_pred ccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
|.....++|++|+++|+|.+++.... ..+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 78 ~~~~~~~~v~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~--~~iiH~dlkp~Nill~~~~~~kl~Df 153 (316)
T cd05108 78 CLTSTVQLITQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEE--RRLVHRDLAARNVLVKTPQHVKITDF 153 (316)
T ss_pred EcCCCceeeeecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHh--cCeeccccchhheEecCCCcEEEccc
Confidence 98878899999999999999998643 358899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++........ .......++..|+|||.+ ...++.++|||||||++|||++ |..||.+............. ...+
T Consensus 154 G~a~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~ 231 (316)
T cd05108 154 GLAKLLGADEKE-YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKG-ERLP 231 (316)
T ss_pred cccccccCCCcc-eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCC-CCCC
Confidence 999876543211 112223456789999965 4567899999999999999998 99999876533322221111 1100
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.+..++..+.+++.+|+..+|.+||++.+++..|.++.+
T Consensus 232 ----------~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 232 ----------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ----------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 011123347788999999999999999999999988765
No 52
>KOG0201|consensus
Probab=100.00 E-value=3.3e-42 Score=331.43 Aligned_cols=242 Identities=27% Similarity=0.388 Sum_probs=199.6
Q ss_pred CCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
..+||+|.||.||+|.+. +++.||+|++..... ...+...++|+.++.+|+++||.++|+.+.. ..
T Consensus 18 ~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~------------~deIediqqei~~Ls~~~~~~it~yygsyl~g~~ 85 (467)
T KOG0201|consen 18 LELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA------------EDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTK 85 (467)
T ss_pred chhccccccceeeeeeeccccceEEEEEechhhc------------chhhHHHHHHHHHHHhcCcchHHhhhhheeeccc
Confidence 378999999999999986 478999999965432 1125558899999999999999999996655 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.+++||||.||++.+.|.. +..+.+..+..|+.+++.|+.|||. ++.+|||||++|||+..+|.+|++|||.+-.
T Consensus 86 LwiiMey~~gGsv~~lL~~---~~~~~E~~i~~ilre~l~~l~ylH~--~~kiHrDIKaanil~s~~g~vkl~DfgVa~q 160 (467)
T KOG0201|consen 86 LWIIMEYCGGGSVLDLLKS---GNILDEFEIAVILREVLKGLDYLHS--EKKIHRDIKAANILLSESGDVKLADFGVAGQ 160 (467)
T ss_pred HHHHHHHhcCcchhhhhcc---CCCCccceeeeehHHHHHHhhhhhh--cceecccccccceeEeccCcEEEEecceeee
Confidence 8999999999999999986 4456888999999999999999999 8899999999999999999999999999876
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... ....+++||+-|||||++.+ .|+.|+||||||++.+||++|.+|+.+..+......+..... +.
T Consensus 161 l~~~~---~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~P-------P~ 230 (467)
T KOG0201|consen 161 LTNTV---KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAP-------PR 230 (467)
T ss_pred eechh---hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCC-------Cc
Confidence 55433 22367899999999997765 789999999999999999999999998765332222221111 11
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ ...++..+++|+..|+..+|+.||++.++++
T Consensus 231 L----~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 231 L----DGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred c----ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1 1245566999999999999999999999986
No 53
>KOG0663|consensus
Probab=100.00 E-value=4.2e-41 Score=313.39 Aligned_cols=255 Identities=24% Similarity=0.296 Sum_probs=196.3
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC--
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-- 250 (455)
..++|++|+||.||+|+++ +++.||+|+++.+.... -+++. ..+||.+|.+++|||||.+-.+...
T Consensus 80 ~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~----------GFPIt-sLREIniLl~~~H~NIV~vkEVVvG~~ 148 (419)
T KOG0663|consen 80 KLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKE----------GFPIT-SLREINILLKARHPNIVEVKEVVVGSN 148 (419)
T ss_pred HHhhcccCcceeEEEeccCCcceeEEeeecccccccC----------CCcch-hHHHHHHHHhcCCCCeeeeEEEEeccc
Confidence 3389999999999999987 47899999998654311 12233 5799999999999999999885433
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+|||||. -+|...+.... .++...++..+..|+++|++|||. +.|+|||||++|+|+...|.+||+|||+
T Consensus 149 ~d~iy~VMe~~E-hDLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~--~wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 149 MDKIYIVMEYVE-HDLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHD--NWILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred cceeeeeHHHHH-hhHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhh--ceeEecccchhheeeccCCcEEecccch
Confidence 67899999995 68888887754 479999999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccc---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVP--- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~--- 403 (455)
||..+.... . .+..+-|..|.|||++.| .+++++|+||+|||+.||+++.+-|.+.........+.. -..+
T Consensus 224 AR~ygsp~k--~-~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~ 300 (419)
T KOG0663|consen 224 AREYGSPLK--P-YTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEA 300 (419)
T ss_pred hhhhcCCcc--c-CcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccc
Confidence 998776521 1 234577999999997755 589999999999999999999999998874333333222 0000
Q ss_pred -hhhcc--------------chhc-cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -VREVL--------------DKEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -~~~~~--------------d~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.+. -..+ +.+........-.+|+..++..||.+|.|+.+.++
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 01000 0000 11111124456778999999999999999998764
No 54
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.2e-40 Score=328.74 Aligned_cols=237 Identities=27% Similarity=0.347 Sum_probs=189.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++ +++.||||++........ .....+..|..++..+ +||||+++++++.+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~ 70 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQD----------DDVECTMTEKRILSLARNHPFLTQLYCCFQTPDR 70 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhc----------cHHHHHHHHHHHHHhccCCCchhceeeEEEcCCE
Confidence 36999999999999986 478999999875322111 1134577888888876 69999999998777 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~iv~Ey~~~g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~--~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~ 145 (320)
T cd05590 71 LFFVMEFVNGGDLMFHIQKS---RRFDEARARFYAAEITSALMFLHD--KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 145 (320)
T ss_pred EEEEEcCCCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeeCCCCee
Confidence 89999999999999998763 468999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......++.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~----- 217 (320)
T cd05590 146 GIFNG---KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----- 217 (320)
T ss_pred cCcCC---CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC-----
Confidence 33221 12344679999999997654 5788999999999999999999999877644433333222222111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.++..+.++|.+|+..||++||++
T Consensus 218 -------~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 218 -------WLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred -------CCCHHHHHHHHHHcccCHHHCCCC
Confidence 234457889999999999999998
No 55
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=4.8e-40 Score=314.92 Aligned_cols=255 Identities=26% Similarity=0.363 Sum_probs=203.1
Q ss_pred CCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
..|++.++||+|+||.||+|.++++..||+|+++.... ....|.+|++++++++||||+++++++.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~--------------~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM--------------SPEAFLQEAQVMKKLRHEKLVQLYAVVS 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc--------------CHHHHHHHHHHHHhCCCCCcceEEEEEC
Confidence 34677799999999999999987667899999864221 1235889999999999999999999887
Q ss_pred CceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 250 NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 250 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+...++||||+++|+|.+++.... ...+++..+..++.+++.||.|||+ .+++||||||+||++++++.+||+|||.
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~Nill~~~~~~~L~dfg~ 148 (262)
T cd05071 72 EEPIYIVTEYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVER--MNYVHRDLRAANILVGENLVCKVADFGL 148 (262)
T ss_pred CCCcEEEEEcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcccEEEcCCCcEEeccCCc
Confidence 777899999999999999997532 3457999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......++..|+|||.. .+.++.++|+||||+++|||+| |..||................ ..
T Consensus 149 ~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~-~~--- 222 (262)
T cd05071 149 ARLIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY-RM--- 222 (262)
T ss_pred eeeccccccc--cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCC-CC---
Confidence 8765433211 12234567789999965 4568899999999999999999 898997665332222221110 00
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.....++..+.+++.+|+..+|++||++.++++.|++.++
T Consensus 223 -------~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~~ 262 (262)
T cd05071 223 -------PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 262 (262)
T ss_pred -------CCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhcC
Confidence 0012344567899999999999999999999999998763
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.7e-40 Score=326.84 Aligned_cols=255 Identities=25% Similarity=0.328 Sum_probs=196.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++ ++..||+|.+..... ......+.+|++++++++||||+++++++.+
T Consensus 7 y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (331)
T cd06649 7 FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIK------------PAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (331)
T ss_pred ceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccC------------HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 455689999999999999987 478899999864311 0114568999999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 75 DGEISICMEHMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREK-HQIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred CCEEEEEeecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhc-CCEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 7889999999999999999763 3589999999999999999999982 3599999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcc----cc-
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE----VP- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~----~~- 403 (455)
+....... .....||+.|+|||.+.+ .++.++|||||||++|||+||+.||...+............ ..
T Consensus 151 ~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (331)
T cd06649 151 SGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGE 225 (331)
T ss_pred cccccccc-----cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCC
Confidence 87553321 234579999999997654 57889999999999999999999997655322211110000 00
Q ss_pred ---------------------------hhhccc----hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 ---------------------------VREVLD----KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ---------------------------~~~~~d----~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..+ ......+...++..+.+||.+||..||++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~ 300 (331)
T cd06649 226 PHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMN 300 (331)
T ss_pred ccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000 00011112235567899999999999999999999976
No 57
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=2e-40 Score=326.74 Aligned_cols=241 Identities=25% Similarity=0.350 Sum_probs=188.3
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh-CCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++. ++.||||+++....... .....+..|..++.. .+||||+++++++.. ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~ 70 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLED----------DDVECTMVERRVLALAWEHPFLTHLFCTFQTKEH 70 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhccCCCCccceeeEEEcCCE
Confidence 369999999999999864 78899999975432111 012335567777765 489999999998766 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||++||+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~gg~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~ 145 (316)
T cd05592 71 LFFVMEYLNGGDLMFHIQSS---GRFDEARARFYAAEIICGLQFLHK--KGIIYRDLKLDNVLLDKDGHIKIADFGMCKE 145 (316)
T ss_pred EEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHeEECCCCCEEEccCcCCeE
Confidence 89999999999999998763 468999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~------ 216 (316)
T cd05592 146 NMNGE---GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP------ 216 (316)
T ss_pred CCCCC---CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence 43322 12345679999999997654 578899999999999999999999987664333332222111111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHH-HHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR-DIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~-evl 446 (455)
..++..+.+|+.+||..+|++||++. +++
T Consensus 217 ------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 217 ------RWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred ------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 12344578899999999999999875 443
No 58
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.7e-40 Score=314.26 Aligned_cols=251 Identities=26% Similarity=0.410 Sum_probs=200.0
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++.++||+|+||.||+|..++++.||+|.+..... ....+.+|+.++++++|+||+++++++.+
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM--------------SVQAFLEEANLMKTLQHDKLVRLYAVVTKE 73 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCCceEEEEEccCCch--------------hHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 356689999999999999988788899999753211 13458899999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ...+++..++.++.+++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 74 EPIYIITEYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIER--KNYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred CCcEEEEecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEecCCCcEEECCCccc
Confidence 77899999999999999997643 3468999999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .......++..|+|||.+. +.++.++|||||||++|+|+| |..||............... ...+
T Consensus 151 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~--- 224 (261)
T cd05072 151 RVIEDNEY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRMP--- 224 (261)
T ss_pred eecCCCce--eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCC---
Confidence 86543321 1122345677899999654 467889999999999999998 99999876533322222211 1100
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
....++..+.+++.+||..+|++||+++++.+.|+++
T Consensus 225 -------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 225 -------RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred -------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 0112344578899999999999999999999999864
No 59
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.5e-40 Score=328.18 Aligned_cols=242 Identities=25% Similarity=0.342 Sum_probs=191.7
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|+++. ++.||||+++....... .....+..|.+++..+ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~ 70 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQD----------DDVDCTMTEKRILALAAKHPFLTALHCCFQTKDR 70 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhh----------hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCe
Confidence 369999999999999864 78999999975422111 1134577888988866 79999999998877 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~E~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~ 145 (321)
T cd05591 71 LFFVMEYVNGGDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHR--HGVIYRDLKLDNILLDAEGHCKLADFGMCKE 145 (321)
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeeccccee
Confidence 89999999999999998763 458999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||+||..||...+.......+.......+.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~----- 217 (321)
T cd05591 146 GILNG---VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPV----- 217 (321)
T ss_pred cccCC---ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC-----
Confidence 43222 11234679999999997654 6788999999999999999999999877644433333222211111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCC-------CHHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRA-------SMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-------s~~evl~ 447 (455)
.++..+.++|.+|+..+|++|| ++.++++
T Consensus 218 -------~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 218 -------WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred -------CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 1334578899999999999999 6666653
No 60
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=7.5e-40 Score=316.59 Aligned_cols=255 Identities=22% Similarity=0.411 Sum_probs=198.1
Q ss_pred cCCCccCcCCCeEEEEEEEcC-Cc----EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.+.||+|+||.||+|.+.. +. .|++|++..... ......+..|+.+++++.||||++++++
T Consensus 10 ~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~------------~~~~~~~~~~~~~l~~l~h~~iv~~~~~ 77 (279)
T cd05111 10 RKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSG------------RQTFQEITDHMLAMGSLDHAYIVRLLGI 77 (279)
T ss_pred eeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccc------------hHHHHHHHHHHHHHhcCCCCCcceEEEE
Confidence 445889999999999999753 44 467777642211 0113457788999999999999999999
Q ss_pred ccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.....++++||+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+||
T Consensus 78 ~~~~~~~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~kl~Df 153 (279)
T cd05111 78 CPGASLQLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEE--HRMVHRNLAARNILLKSDSIVQIADF 153 (279)
T ss_pred ECCCccEEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEEcCC
Confidence 88877889999999999999997643 368999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++...... .........|+..|+|||.+ .+.++.++|||||||++||++| |..||.+................ .
T Consensus 154 g~~~~~~~~~-~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~ 231 (279)
T cd05111 154 GVADLLYPDD-KKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERL-A 231 (279)
T ss_pred ccceeccCCC-cccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-C
Confidence 9998654332 11122345677889999966 4568899999999999999998 99999876543322222211111 0
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhcC
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
.+..++..+.+++.+|+..+|++||++.|+++.|..+.+|
T Consensus 232 ----------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 232 ----------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0111233467788999999999999999999999887654
No 61
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.7e-41 Score=330.85 Aligned_cols=243 Identities=24% Similarity=0.361 Sum_probs=192.6
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||++..+ +|+.||+|+++...... ......+.+|++++..++||||+++++++.. ...
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~----------~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~ 70 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA----------KDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL 70 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEE
Confidence 36999999999999975 58899999997542211 1113457789999999999999999997766 788
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+. +||+||||||+|||++.++.+||+|||+++..
T Consensus 71 ~lv~E~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~lH~~-~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 71 CFVMEYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHSE-KNVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred EEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999999998876 34689999999999999999999962 47999999999999999999999999998754
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
..... ......||+.|+|||++. +.++.++|||||||++|||+||..||...........+......++.
T Consensus 147 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~------ 217 (325)
T cd05594 147 IKDGA---TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR------ 217 (325)
T ss_pred CCCCc---ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC------
Confidence 32211 123457999999999764 46789999999999999999999999876543333332222222221
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
.++..+.++|.+||..||++|+ ++.++++
T Consensus 218 ------~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 218 ------TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred ------CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 2334578899999999999996 8888864
No 62
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.1e-40 Score=334.91 Aligned_cols=258 Identities=26% Similarity=0.390 Sum_probs=199.9
Q ss_pred CcCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l 244 (455)
++++++||+|+||.||+|++.. +..||||+++.... . ...+.|.+|+++++++. ||||+++
T Consensus 39 ~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~------~------~~~~~~~~Ei~~l~~l~~HpnIv~l 106 (400)
T cd05105 39 LVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR------S------SEKQALMSELKIMTHLGPHLNIVNL 106 (400)
T ss_pred eehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC------h------HHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 4566999999999999998631 34699999864321 0 01345899999999996 9999999
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcCC-------------------------------------------------
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVNN------------------------------------------------- 274 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------------------------------------------- 274 (455)
++++.+ ...|+|||||++|+|.+++.....
T Consensus 107 ~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (400)
T cd05105 107 LGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTT 186 (400)
T ss_pred EEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccc
Confidence 999877 788999999999999998865310
Q ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCC
Q psy5603 275 --------------------------------------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 275 --------------------------------------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dik 310 (455)
...+++..++.++.|++.||.|||+ .+++|||||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dik 264 (400)
T cd05105 187 QYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS--KNCVHRDLA 264 (400)
T ss_pred ccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCC
Confidence 1347888999999999999999999 889999999
Q ss_pred CCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCC
Q psy5603 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDN 388 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~ 388 (455)
|+|||++.++.+||+|||+++........ .......++..|+|||.+ .+.++.++|||||||++|||++ |..||...
T Consensus 265 p~Nill~~~~~~kL~DfGla~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~ 343 (400)
T cd05105 265 ARNVLLAQGKIVKICDFGLARDIMHDSNY-VSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGM 343 (400)
T ss_pred hHhEEEeCCCEEEEEeCCcceeccccccc-cccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCccc
Confidence 99999999999999999998865432211 112334677889999965 4467899999999999999997 99999765
Q ss_pred cchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 389 NTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
................ ..+..++..+.+++.+||..+|++||++.+|.+.|++++.
T Consensus 344 ~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 344 IVDSTFYNKIKSGYRM----------AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred chhHHHHHHHhcCCCC----------CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 4322211111111110 0112345568889999999999999999999999998864
No 63
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.4e-40 Score=323.86 Aligned_cols=258 Identities=23% Similarity=0.318 Sum_probs=192.6
Q ss_pred CCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.++||+|+||.||+|..+ +++.||||+++...... ....+.+|+.++++++||||+++++++
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~------------~~~~~~~E~~~l~~l~h~niv~~~~~~ 72 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG------------TPFTAIREASLLKGLKHANIVLLHDII 72 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc------------cchhHHHHHHHHhhCCCCCcCeEEEEE
Confidence 34566799999999999999986 58899999986432110 022367899999999999999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...|+||||+ +++|.+++.... ..++...+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+||
T Consensus 73 ~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Df 147 (303)
T cd07869 73 HTKETLTLVFEYV-HTDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIHQ--RYILHRDLKPQNLLISDTGELKLADF 147 (303)
T ss_pred ecCCeEEEEEECC-CcCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECCC
Confidence 77 7889999999 578888886532 358899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHH-h-hh-ccc
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL-V-VE-QEV 402 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~-~-~~-~~~ 402 (455)
|+++...... .......||+.|+|||++.+ .++.++|||||||++|||++|..||.+......... . .. ...
T Consensus 148 g~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 224 (303)
T cd07869 148 GLARAKSVPS---HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTP 224 (303)
T ss_pred CcceeccCCC---ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCC
Confidence 9987543221 11234578999999997643 468899999999999999999999987543211111 0 00 000
Q ss_pred c---------hhhccchhc---------cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 P---------VREVLDKEA---------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~---------~~~~~d~~~---------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ......... ..+........+.+|+.+|+..||++|||+.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 225 NEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0 000000000 00111112345778999999999999999999975
No 64
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=6.9e-40 Score=316.88 Aligned_cols=254 Identities=28% Similarity=0.483 Sum_probs=200.0
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.+.||+|+||.||+|.... ...||+|.++.... . .....|.+|+.++.+++||||+++++
T Consensus 8 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~------~------~~~~~~~~ei~~l~~l~h~~i~~~~~ 75 (283)
T cd05048 8 RFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAE------P------KVQQEFRQEAELMSDLQHPNIVCLLG 75 (283)
T ss_pred chhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCC------H------HHHHHHHHHHHHHHhcCCcccceEEE
Confidence 345889999999999998753 25799999863321 0 11345889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCC
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~ 312 (455)
++.+ ...|++|||+++|+|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+
T Consensus 76 ~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~ 153 (283)
T cd05048 76 VCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS--HHFVHRDLAAR 153 (283)
T ss_pred EEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccccc
Confidence 8876 778999999999999999976421 1458899999999999999999999 88999999999
Q ss_pred cEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcc
Q psy5603 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
||++++++.+||+|||+++....... ........+++.|+|||.+ .+.++.++|||||||++|||++ |..||.+...
T Consensus 154 Nil~~~~~~~~L~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05048 154 NCLVGEGLTVKISDFGLSRDIYSADY-YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN 232 (283)
T ss_pred eEEEcCCCcEEECCCcceeecccccc-ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999876543221 1122344678899999955 4578999999999999999998 9999987654
Q ss_pred hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
......+.... .. ..+..++..+.+|+.+|+..+|.+||++.+|++.|+++
T Consensus 233 ~~~~~~i~~~~--~~---------~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 233 QEVIEMIRSRQ--LL---------PCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHHHcCC--cC---------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 33322222111 00 11223456688999999999999999999999999763
No 65
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-40 Score=328.05 Aligned_cols=244 Identities=24% Similarity=0.348 Sum_probs=189.1
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHH---HhhCCccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT---LSQCKHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~---l~~l~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.++ +++.||||+++....... .....+.+|+.+ +++++||||+++++++
T Consensus 2 ~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~ 71 (324)
T cd05589 2 RCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIAR----------DEVESLMCEKRIFETANSERHPFLVNLFACF 71 (324)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hHHHHHHHHHHHHHhccccCCCChhceeeEE
Confidence 45688999999999999976 488999999975421111 012345556554 4677899999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...|+||||+++|+|..++.. ..+++..+..++.|++.||.|||+ +|++||||||+|||++.++.+||+||
T Consensus 72 ~~~~~~~lv~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 72 QTEDHVCFVMEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHE--NKIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EcCCEEEEEEcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCcEEeCcc
Confidence 77 788999999999999988764 359999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++...... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...........+.......+
T Consensus 146 g~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p- 221 (324)
T cd05589 146 GLCKEGMGFG---DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP- 221 (324)
T ss_pred cCCccCCCCC---CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC-
Confidence 9987532221 12345689999999996644 578899999999999999999999987664333322222211111
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
..++..+.++|.+||..||.+||+ +.++++
T Consensus 222 -----------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 222 -----------RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----------CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 123445788999999999999994 555543
No 66
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.6e-40 Score=312.49 Aligned_cols=247 Identities=25% Similarity=0.416 Sum_probs=195.5
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||+|.++++..+|+|.+..... ....|.+|+.++++++||||+++++++.+ .
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05114 7 TFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM--------------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK 72 (256)
T ss_pred EEeeEecCCcCceEEEEEeccCceEEEEecccCCc--------------cHHHHHHHHHHHHHCCCCCceeEEEEEccCC
Confidence 34478999999999999998777899998753321 13348899999999999999999998877 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||+++|+|.+++.... ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||+++
T Consensus 73 ~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 73 PLYIVTEFMENGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLER--NSFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred CEEEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccCcceEEEcCCCeEEECCCCCcc
Confidence 8899999999999999987533 358999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. ..++.++|+||||+++|||++ |..||...+.......+.......
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~----- 221 (256)
T cd05114 149 YVLDDEYT--SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLY----- 221 (256)
T ss_pred ccCCCcee--ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC-----
Confidence 65432211 112334567899999764 467889999999999999999 999998766433322222111100
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
.+...+..+.+++.+||..+|++||++.++++.|.
T Consensus 222 ------~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 222 ------RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ------CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 01112345788999999999999999999998873
No 67
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.9e-40 Score=325.82 Aligned_cols=242 Identities=27% Similarity=0.376 Sum_probs=192.0
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++. ++.||||+++....... .....+..|.+++..+ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~ 70 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQD----------DDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDR 70 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCE
Confidence 369999999999999864 78999999975432111 1134577888998887 79999999998776 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||++||+|.+++... ..+++.++..++.|++.||.|||+ .+++||||||+|||+++++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~ 145 (318)
T cd05570 71 LFFVMEYVNGGDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHE--RGIIYRDLKLDNVLLDSEGHIKIADFGMCKE 145 (318)
T ss_pred EEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEccCCCHHHeEECCCCcEEecccCCCee
Confidence 89999999999999998763 369999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|+|||||++|+|++|..||...........+......++
T Consensus 146 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~------ 216 (318)
T cd05570 146 GILGG---VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP------ 216 (318)
T ss_pred cCcCC---CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence 32221 11234579999999997654 678899999999999999999999987654333322222211111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCH-----HHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASM-----RDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~-----~evl~ 447 (455)
..++..+.+||.+||..||++||++ .++++
T Consensus 217 ------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 217 ------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred ------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1234558889999999999999999 77654
No 68
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=6.4e-40 Score=318.36 Aligned_cols=257 Identities=23% Similarity=0.348 Sum_probs=190.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc--CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC---Cccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK--NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~ 246 (455)
|++.+.||+|+||.||+|.+. +++.||||+++........ ...+.+|+.+++.+ +||||+++++
T Consensus 3 Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~-----------~~~~~~e~~~l~~l~~~~hpniv~~~~ 71 (290)
T cd07862 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM-----------PLSTIREVAVLRHLETFEHPNVVRLFD 71 (290)
T ss_pred cceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc-----------hHHHHHHHHHHHhhcccCCCCcceEEE
Confidence 566789999999999999873 3678999998754321110 12355676666655 7999999999
Q ss_pred ccc------CceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 247 LCN------NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 247 ~~~------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
++. ....++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+ ++++||||||+|||++.++
T Consensus 72 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~--~~iiH~dlkp~Nil~~~~~ 147 (290)
T cd07862 72 VCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHS--HRVVHRDLKPQNILVTSSG 147 (290)
T ss_pred EEecccCCCCCcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEEcCCC
Confidence 763 256799999995 69999987643 2458999999999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
.+||+|||+++...... ......||+.|+|||.+ ...++.++|||||||++|||++|.+||...........+..
T Consensus 148 ~~kl~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~ 223 (290)
T cd07862 148 QIKLADFGLARIYSFQM----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD 223 (290)
T ss_pred CEEEccccceEeccCCc----ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence 99999999987654321 23345799999999966 44678899999999999999999999987764322222211
Q ss_pred -cccchhh-----------ccchhccCCC---hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 -QEVPVRE-----------VLDKEAGEWN---ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~~~~~~-----------~~d~~~~~~~---~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+... .+........ ...++..+.+|+.+||..+|++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 224 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred HhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000 0000000000 0124566789999999999999999999875
No 69
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.6e-40 Score=325.95 Aligned_cols=241 Identities=25% Similarity=0.299 Sum_probs=189.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCcc-ceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV-NLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|.++. ++.||||+++...... ......+..|.+++..+.|+ +|+.+++++.
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~ 71 (324)
T cd05587 2 FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ----------DDDVECTMVEKRVLALPGKPPFLTQLHSCFQ 71 (324)
T ss_pred ceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhcCCCCceeeeEEEEE
Confidence 3456899999999999999874 6789999997543211 11144578899999999765 5778888776
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ +..|+||||+++|+|.+++... ..+++.++..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 72 ~~~~~~lv~E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 72 TMDRLYFVMEYVNGGDLMYHIQQV---GKFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEEcCCCCEEEeecC
Confidence 6 7889999999999999998763 458999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++...... .......||+.|+|||++.+ .++.++|||||||++|||+||..||...........+......++.
T Consensus 147 ~~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~- 222 (324)
T cd05587 147 MCKENIFGG---KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK- 222 (324)
T ss_pred cceecCCCC---CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC-
Confidence 987432221 11234579999999997654 5788999999999999999999999877654433333322222211
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.++..+.+++.+||..+|.+|++.
T Consensus 223 -----------~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 223 -----------SLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred -----------CCCHHHHHHHHHHhhcCHHHcCCC
Confidence 233457788999999999999976
No 70
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.5e-39 Score=310.78 Aligned_cols=250 Identities=27% Similarity=0.398 Sum_probs=199.4
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|++.++||+|+||.||+|.++++..||+|.++.... . ...|.+|+.++++++|+|++++++++.+.
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~------~--------~~~~~~E~~~l~~l~~~~i~~~~~~~~~~ 73 (260)
T cd05070 8 LQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM------S--------PESFLEEAQIMKKLRHDKLVQLYAVVSEE 73 (260)
T ss_pred hhhhheeccccCceEEEEEecCCceeEEEEecCCCC------C--------HHHHHHHHHHHHhcCCCceEEEEeEECCC
Confidence 455689999999999999988778899999864321 0 23488999999999999999999988777
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++.+++.++.+++.||.|||+ ++++||||||+||++++++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~Nili~~~~~~~l~dfg~~~ 150 (260)
T cd05070 74 PIYIVTEYMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIER--MNYIHRDLRSANILVGDGLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCccceEEEeCCceEEeCCceeee
Confidence 8899999999999999987633 3458999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+ .+.++.++|+||||+++|||++ |.+||............... ...
T Consensus 151 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~----- 222 (260)
T cd05070 151 LIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRM----- 222 (260)
T ss_pred eccCcccc--cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCC-----
Confidence 65432211 12233456789999965 4567889999999999999999 99999765533222222111 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..+...+..+.+++.+|+..+|.+||++.++.+.|++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 223 -----PCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -----CCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0112334568899999999999999999999999876
No 71
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.1e-40 Score=324.48 Aligned_cols=241 Identities=25% Similarity=0.333 Sum_probs=188.7
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh-CCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++ +|+.||+|+++....... .....+..|..++.. .+||||+++++++.+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~ 70 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID----------DDVECTMVEKRVLALAWENPFLTHLYCTFQTKEH 70 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhc----------chHHHHHHHHHHHHhccCCCCccCeeEEEEeCCE
Confidence 36999999999999987 478999999975432111 013346678888875 489999999998777 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+.+|+|.+++... ..+++.++..++.|++.||+|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05620 71 LFFVMEFLNGGDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHS--KGIIYRDLKLDNVMLDRDGHIKIADFGMCKE 145 (316)
T ss_pred EEEEECCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEeCccCCCee
Confidence 89999999999999998763 468999999999999999999999 8899999999999999999999999999874
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......++.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~----- 217 (316)
T cd05620 146 NVFGD---NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR----- 217 (316)
T ss_pred cccCC---CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC-----
Confidence 32211 11335679999999997654 6788999999999999999999999876543322222211111111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHH-HHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR-DIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~-evl 446 (455)
.++..+.++|.+||..||++||++. ++.
T Consensus 218 -------~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 218 -------WITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -------CCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1334578899999999999999985 554
No 72
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.3e-39 Score=311.95 Aligned_cols=250 Identities=28% Similarity=0.463 Sum_probs=198.6
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.++||+|+||.||+|.++. ++.||+|.+..... ....+.+|++++++++||||+++++++.. .
T Consensus 10 ~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (263)
T cd05052 10 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--------------EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 75 (263)
T ss_pred EeeecCCcccceEEEEEEecCCceEEEEEecCCch--------------HHHHHHHHHHHHHhCCCCChhheEEEEcCCC
Confidence 34789999999999999764 78999999853211 13458899999999999999999998776 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+ ++++||||||+||++++++.+||+|||+++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 76 PFYIITEFMTYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred CcEEEEEeCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 8899999999999999987543 3468999999999999999999999 889999999999999999999999999988
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......++..|+|||.+. ..++.++|||||||++|||++ |..||............... ...
T Consensus 153 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~----- 224 (263)
T cd05052 153 LMTGDTY--TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKG-YRM----- 224 (263)
T ss_pred cccccee--eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC-CCC-----
Confidence 6543221 1112234466899999664 467889999999999999998 99999876543322222111 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..++..+.+++.+|+..+|++||++.++++.|+.++
T Consensus 225 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 225 -----ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred -----CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 011224456888999999999999999999999999864
No 73
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-40 Score=332.60 Aligned_cols=250 Identities=23% Similarity=0.324 Sum_probs=198.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+. +|+.||||+++...... ......+.+|++++..++||||+++++++.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (350)
T cd05573 3 FEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK----------RNQIAHVRAERDILADADSPWIVKLYYSFQD 72 (350)
T ss_pred ceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh----------ccHHHHHHHHHHHHHhcCCCCccchhhheec
Confidence 456689999999999999987 58999999997542211 1124568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++++|.+++... ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~--~giiH~Dlkp~NIll~~~~~~kL~Dfg~ 147 (350)
T cd05573 73 EEHLYLVMEYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHK--LGFIHRDIKPDNILIDADGHIKLADFGL 147 (350)
T ss_pred CCeEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEeecCCC
Confidence 7889999999999999999874 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCc--------------------------ceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCC
Q psy5603 330 VKMSETSNM--------------------------KTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 330 a~~~~~~~~--------------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~ 382 (455)
++....... .........||+.|+|||++.+ .++.++|||||||++|||++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 227 (350)
T cd05573 148 CKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGF 227 (350)
T ss_pred CccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCC
Confidence 876543320 0011234579999999997654 5789999999999999999999
Q ss_pred CCCCCCcchhhHHHhhh--cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC-HHHHHH
Q psy5603 383 KPIDDNNTILYYYLVVE--QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS-MRDIVD 447 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-~~evl~ 447 (455)
.||...........+.. ....++. ...++..+.+||.+|+. +|.+||+ +.++++
T Consensus 228 ~Pf~~~~~~~~~~~i~~~~~~~~~p~----------~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 228 PPFYSDTLQETYNKIINWKESLRFPP----------DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred CCCCCCCHHHHHHHHhccCCcccCCC----------CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 99987764333332222 1111110 11144568888998886 9999999 999976
No 74
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.6e-39 Score=310.73 Aligned_cols=250 Identities=26% Similarity=0.385 Sum_probs=199.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|++..+||+|+||.||+|.++.+..||+|.+..... ....+.+|+.++++++|+|++++++++...
T Consensus 8 ~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 73 (260)
T cd05069 8 LRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM--------------MPEAFLQEAQIMKKLRHDKLVPLYAVVSEE 73 (260)
T ss_pred eeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc--------------cHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 566689999999999999987767899998754321 124488999999999999999999988777
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++..+..++.+++.||.|||+ .+++|+||||+||++++++.++|+|||+++
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 74 PIYIVTEFMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIER--MNYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccCcceEEEcCCCeEEECCCccce
Confidence 8899999999999999997643 3458999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||... +..+.++|+||||+++|||+| |..||.+............. ...
T Consensus 151 ~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~----- 222 (260)
T cd05069 151 LIEDNEYT--ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YRM----- 222 (260)
T ss_pred EccCCccc--ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC-----
Confidence 65433211 112335677899999654 567889999999999999999 99999876533222222111 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..+...+..+.+++.+||..+|++||++++|.+.|++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -----PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -----CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0112345568899999999999999999999999986
No 75
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=2.7e-40 Score=334.19 Aligned_cols=253 Identities=23% Similarity=0.255 Sum_probs=190.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|.++ +++.||||++....... ......+.+|+.++++++||||+++++++.+
T Consensus 3 f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~ 72 (381)
T cd05626 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN----------RNQVAHVKAERDILAEADNEWVVKLYYSFQD 72 (381)
T ss_pred ceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhcCCCCeeeeEEEEec
Confidence 455689999999999999876 47899999997532211 1114568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++... ..+++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~--~givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 73 KDNLYFVMDYIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHK--MGFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 8889999999999999999863 458999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcc--------------------------------------------eeeeccCCCCCCCCCccccc-CCCCc
Q psy5603 330 VKMSETSNMK--------------------------------------------TMYTENLTGTRPYMPPEAMH-CQIST 364 (455)
Q Consensus 330 a~~~~~~~~~--------------------------------------------~~~~~~~~gt~~Y~aPE~~~-~~~~~ 364 (455)
++........ ........||+.|+|||++. ..++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQ 227 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCC
Confidence 7533110000 00112357999999999664 45789
Q ss_pred ccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhcc--CcCCCCCH
Q psy5603 365 KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVF--EKDKRASM 442 (455)
Q Consensus 365 ~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~--dp~~RPs~ 442 (455)
++|||||||++|||+||..||...........+......+. ......++..+.+||.++|.. ++..||++
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~--------~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLH--------IPPQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccC--------CCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 99999999999999999999987654332222221111100 000112334567778775544 45669999
Q ss_pred HHHHH
Q psy5603 443 RDIVD 447 (455)
Q Consensus 443 ~evl~ 447 (455)
.++++
T Consensus 300 ~~~l~ 304 (381)
T cd05626 300 DDIKA 304 (381)
T ss_pred HHHhc
Confidence 99975
No 76
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.4e-40 Score=328.01 Aligned_cols=238 Identities=24% Similarity=0.332 Sum_probs=190.3
Q ss_pred CccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 176 NKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||++... +|+.||+|++...... ......+.+|++++++++||||+++++++.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 70 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK-----------VRDRVRTKMERDILAEVNHPFIVKLHYAFQTE 70 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh-----------hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcC
Confidence 57999999999998752 4789999999753221 0113447789999999999999999998776
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 71 ~~~~lv~e~~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 145 (318)
T cd05582 71 GKLYLILDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS--LGIIYRDLKPENILLDEEGHIKLTDFGLS 145 (318)
T ss_pred CEEEEEEcCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHeEECCCCcEEEeeccCC
Confidence 788999999999999999976 3468999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+...... .......||+.|+|||.+.+ .++.++|||||||++|||+||..||...........+......++
T Consensus 146 ~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p---- 218 (318)
T cd05582 146 KESIDHE---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP---- 218 (318)
T ss_pred cccCCCC---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----
Confidence 7654321 11234689999999997654 578899999999999999999999987654333222222222211
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRD 444 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~e 444 (455)
..++..+.+||.+||..||++||++.+
T Consensus 219 --------~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 219 --------QFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred --------CCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 123445788999999999999999555
No 77
>KOG2345|consensus
Probab=100.00 E-value=1.2e-40 Score=299.19 Aligned_cols=262 Identities=23% Similarity=0.312 Sum_probs=204.5
Q ss_pred CCCcCCCccCcCCCeEEEEEEE-cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+|++.++||+|||+-||+++. .++..||+|++..... ++ +....+|++.-++++|||++++++++
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~------~~-------~e~~~rEid~~rkf~s~~vl~l~dh~ 87 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQ------ED-------IEEALREIDNHRKFNSPNVLRLVDHQ 87 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeeccch------HH-------HHHHHHHHHHHHhhCCcchHHHHHHH
Confidence 4678889999999999999984 3578999999965431 11 45588999999999999999999976
Q ss_pred cC------ceeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 249 NN------IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 249 ~~------~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.. ...|++++|+..|||.+.+....- +..+++.+.+.|+.++++||++||+...++.||||||+|||+.+.+.
T Consensus 88 l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~ 167 (302)
T KOG2345|consen 88 LREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGL 167 (302)
T ss_pred HHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCc
Confidence 33 357999999999999999876543 45799999999999999999999996556999999999999999999
Q ss_pred eEEeecccccccccCCcceee------eccCCCCCCCCCcccccC----CCCcccchHHHHHHHHHHHcCCCCCCCCcch
Q psy5603 322 PKLGDFGIVKMSETSNMKTMY------TENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~------~~~~~gt~~Y~aPE~~~~----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~ 391 (455)
++|.|||.++...-.-..... -..-..|..|.|||.+.- ..++++|||||||+||+|+.|..||+..-+
T Consensus 168 ~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~- 246 (302)
T KOG2345|consen 168 PVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ- 246 (302)
T ss_pred eEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhh-
Confidence 999999998755432111000 012356899999998854 368899999999999999999999974211
Q ss_pred hhHHHhhhcccchh-hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 392 LYYYLVVEQEVPVR-EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 392 ~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....+. .+......-+...-+++.+.++|..|++.||.+||++.+++..+++++
T Consensus 247 --------~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 247 --------QGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred --------cCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 111111 111222222333346777899999999999999999999999998875
No 78
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.3e-40 Score=323.67 Aligned_cols=241 Identities=27% Similarity=0.360 Sum_probs=188.8
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh-CCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++. ++.||||+++....... .....+..|..++.. ++||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~ 70 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMD----------DDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKEN 70 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhc----------chHHHHHHHHHHHHhccCCCcCcceEEEEEeCCE
Confidence 369999999999999864 78899999975432111 012346677888876 499999999998877 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+++|+|.+++... ..+++.++..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~--~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~ 145 (316)
T cd05619 71 LFFVMEYLNGGDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHS--KGIVYRDLKLDNILLDTDGHIKIADFGMCKE 145 (316)
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEeCCCCHHHEEECCCCCEEEccCCcceE
Confidence 89999999999999999763 468999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
...... ......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~------ 216 (316)
T cd05619 146 NMLGDA---KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP------ 216 (316)
T ss_pred CCCCCC---ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC------
Confidence 332211 1234579999999997654 578999999999999999999999987654332222221111111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHH-HHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR-DIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~-evl 446 (455)
..++..+.++|.+|+..+|++||++. ++.
T Consensus 217 ------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 217 ------RWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred ------ccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 12334578899999999999999997 554
No 79
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-40 Score=328.28 Aligned_cols=248 Identities=22% Similarity=0.282 Sum_probs=191.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|++.+.||+|+||.||++... +++.||+|++....... .......+..|+.++.++ +|+||+++++
T Consensus 2 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~---------~~~~~~~~~~e~~~l~~l~~~~~i~~~~~ 72 (332)
T cd05614 2 FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ---------KAKTVEHTRTERNVLEHVRQSPFLVTLHY 72 (332)
T ss_pred ceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh---------hhhHHHHHHHHHHHHHhccCCCCcccEEE
Confidence 456689999999999999863 47899999996532211 011134578899999999 5899999998
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
++.. ...++||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+
T Consensus 73 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~ivHrDlkp~Nili~~~~~~kl~ 147 (332)
T cd05614 73 AFQTEAKLHLILDYVSGGEMFTHLYQR---DNFSEDEVRFYSGEIILALEHLHK--LGIVYRDIKLENILLDSEGHVVLT 147 (332)
T ss_pred EEecCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHeEECCCCCEEEe
Confidence 7766 7889999999999999999763 458999999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcch----hhHHHhhh
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTI----LYYYLVVE 399 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~----~~~~~~~~ 399 (455)
|||+++........ ......||+.|+|||++.+ .++.++|||||||++|||+||..||...... ........
T Consensus 148 DfG~~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~ 225 (332)
T cd05614 148 DFGLSKEFLSEEKE--RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILK 225 (332)
T ss_pred eCcCCccccccCCC--ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhc
Confidence 99998754332211 1234679999999997754 3678999999999999999999999754321 11111111
Q ss_pred cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 400 QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
....+ +..++..+.+++.+|+..||++|| ++.++++
T Consensus 226 ~~~~~------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 226 CDPPF------------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCC------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11111 122345588899999999999999 6667654
No 80
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.7e-39 Score=310.38 Aligned_cols=250 Identities=21% Similarity=0.365 Sum_probs=194.8
Q ss_pred ccCcCCCeEEEEEEEc---CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCcee
Q psy5603 177 KLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMN 253 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 253 (455)
.||+|+||.||+|.+. .+..||+|++..... . .....|.+|+.++++++||||+++++++.....
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~ 69 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENE------K------SVRDEMMREAEIMHQLDNPYIVRMIGVCEAEAL 69 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccC------h------HHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCe
Confidence 3899999999999864 245799999864321 0 113458899999999999999999999887888
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++..
T Consensus 70 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~ 145 (257)
T cd05115 70 MLVMEMASGGPLNKFLSGK--KDEITVSNVVELMHQVSMGMKYLEG--KNFVHRDLAARNVLLVNQHYAKISDFGLSKAL 145 (257)
T ss_pred EEEEEeCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh--cCeeecccchheEEEcCCCcEEeccCCccccc
Confidence 9999999999999998753 2368999999999999999999999 88999999999999999999999999998755
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..............++..|+|||.+. ..++.++|||||||++||+++ |..||................. .
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~------- 217 (257)
T cd05115 146 GADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR-L------- 217 (257)
T ss_pred cCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-C-------
Confidence 43321111112223457899999664 467889999999999999996 9999987654332222211110 0
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..++..+.+++.+||..+|++||++.+|.+.|+.+.
T Consensus 218 ---~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~~ 256 (257)
T cd05115 218 ---DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTYY 256 (257)
T ss_pred ---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhhc
Confidence 011123455778999999999999999999999998763
No 81
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=8e-40 Score=316.71 Aligned_cols=265 Identities=27% Similarity=0.378 Sum_probs=198.8
Q ss_pred CCcCCCccCcCCCeEEEEEEE-----cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKL-----KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
++++.+.||+|+||+||++.. .++..||+|.++.... . .....|.+|++++++++||||++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~i~~~~ 72 (283)
T cd05080 5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG------Q------QNTSGWKKEINILKTLYHENIVKYK 72 (283)
T ss_pred hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC------h------HHHHHHHHHHHHHHhCCCCCEeeEE
Confidence 346678999999999988753 2467899999864321 0 0134588999999999999999999
Q ss_pred ccccC---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 246 GLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 246 ~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+++.. ...++||||+++++|.+++.. ..+++.+++.++.|++.||.|||+ ++++||||||+||++++++.+
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~ 146 (283)
T cd05080 73 GCCSEQGGKGLQLIMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHS--QHYIHRDLAARNVLLDNDRLV 146 (283)
T ss_pred EEEecCCCceEEEEecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccChheEEEcCCCcE
Confidence 97654 357899999999999999875 248999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-- 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-- 399 (455)
||+|||+++................++..|+|||.+. +..+.++||||||+++|||+||..|+..............
T Consensus 147 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred EEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 9999999886543321111122234566799999654 5678999999999999999999999875442211111000
Q ss_pred --cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 400 --QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 400 --~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....+.+..+.......+..++..+.+++.+|+..+|++||++++|++.|+++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 227 QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 001111111111111112345567899999999999999999999999999874
No 82
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.5e-39 Score=310.84 Aligned_cols=250 Identities=28% Similarity=0.354 Sum_probs=198.6
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||+|.+++++.||+|.++.... ....+.+|+.++++++||||+++++++.. .
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (261)
T cd05068 9 QLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM--------------DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE 74 (261)
T ss_pred eeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc--------------cHHHHHHHHHHHHHCCCCCccceeEEEecCC
Confidence 45589999999999999987778899999864321 03448899999999999999999998776 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||+++++|.+++.... ...+++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||+++
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~ 151 (261)
T cd05068 75 PIYIVTELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEA--QNYIHRDLAARNVLVGENNICKVADFGLAR 151 (261)
T ss_pred CeeeeeecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCCcceEEEcCCCCEEECCcceEE
Confidence 7899999999999999997643 3468999999999999999999999 889999999999999999999999999988
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. ..++.++|+||||+++|||+| |..||............... ...
T Consensus 152 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~----- 223 (261)
T cd05068 152 VIKEDIYE--AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRM----- 223 (261)
T ss_pred EccCCccc--ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCC-----
Confidence 76532211 111223345799999764 467889999999999999999 99999876533222222111 110
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+..++..+.+++.+|+..+|++||++.++.+.|+++
T Consensus 224 -----~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 224 -----PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -----CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 01112345588899999999999999999999999864
No 83
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.7e-40 Score=331.94 Aligned_cols=252 Identities=22% Similarity=0.319 Sum_probs=193.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|.++ +|+.||||++....... ......+.+|+.++..++||||+++++++.+
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~ 72 (364)
T cd05599 3 FESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLE----------KEQVAHVRAERDILAEADNPWVVKLYYSFQD 72 (364)
T ss_pred ceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCCcceEEEEEc
Confidence 455689999999999999986 48899999997432110 1113457889999999999999999998777
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 147 (364)
T cd05599 73 ENYLYLIMEYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHK--LGYIHRDIKPDNLLLDAKGHIKLSDFGL 147 (364)
T ss_pred CCeEEEEECCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEeeccc
Confidence 8889999999999999999863 469999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcce-----------------------------------eeeccCCCCCCCCCcccc-cCCCCcccchHHHHH
Q psy5603 330 VKMSETSNMKT-----------------------------------MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGV 373 (455)
Q Consensus 330 a~~~~~~~~~~-----------------------------------~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGv 373 (455)
+.......... .......||+.|+|||++ ...++.++|||||||
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~ 227 (364)
T cd05599 148 CTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGV 227 (364)
T ss_pred ceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchh
Confidence 87543211000 001124699999999966 446789999999999
Q ss_pred HHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC---HHHHHH
Q psy5603 374 ILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS---MRDIVD 447 (455)
Q Consensus 374 vl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl~ 447 (455)
++|||++|..||...........+......+. ......++..+.+||.+|+. +|.+|++ +.++++
T Consensus 228 il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~--------~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 228 IMYEMLVGYPPFCSDNPQETYRKIINWKETLQ--------FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHHHhhcCCCCCCCCCHHHHHHHHHcCCCccC--------CCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99999999999987764333222221111110 00011234457788888885 8999997 888765
No 84
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.5e-40 Score=325.08 Aligned_cols=240 Identities=25% Similarity=0.316 Sum_probs=189.8
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|..+. ++.||||+++...... ......+..|..++..+ +|++|+.+++++.+
T Consensus 3 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~ 72 (323)
T cd05616 3 NFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ----------DDDVECTMVEKRVLALSGKPPFLTQLHSCFQT 72 (323)
T ss_pred eEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhccCCCeEeeEEEEEec
Confidence 455899999999999999874 7899999997543211 11134466788888777 58899999988776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++... ..+++.++..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kL~DfG~ 147 (323)
T cd05616 73 MDRLYFVMEYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGM 147 (323)
T ss_pred CCEEEEEEcCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEEecCCCHHHeEECCCCcEEEccCCC
Confidence 7889999999999999998763 358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... .......||+.|+|||++. +.++.++|||||||++|||+||..||...+.......+......++
T Consensus 148 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p--- 221 (323)
T cd05616 148 CKENMWDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP--- 221 (323)
T ss_pred ceecCCCC---CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---
Confidence 87543221 1233568999999999664 4678999999999999999999999987764443333332222111
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
..++..+.+++.+|+..+|.+|++.
T Consensus 222 ---------~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 222 ---------KSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---------CcCCHHHHHHHHHHcccCHHhcCCC
Confidence 1234457889999999999999985
No 85
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=7.4e-40 Score=328.84 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=190.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||+||+|..+ +++.||||+++..... .......+.+|+.++.+++|+||+++++.+.+
T Consensus 3 y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~ 72 (363)
T cd05628 3 FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML----------EKEQVGHIRAERDILVEADSLWVVKMFYSFQD 72 (363)
T ss_pred ceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH----------HhhHHHHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 345589999999999999876 4789999999643211 01123557889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++... .++++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~--~givHrDlKp~NILi~~~~~vkL~DFGl 147 (363)
T cd05628 73 KLNLYLIMEFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQ--LGFIHRDIKPDNLLLDSKGHVKLSDFGL 147 (363)
T ss_pred CCeEEEEEcCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeEecCCCHHHeEECCCCCEEEeeccC
Confidence 7889999999999999999863 469999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcc--------------------------------eeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHH
Q psy5603 330 VKMSETSNMK--------------------------------TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILL 376 (455)
Q Consensus 330 a~~~~~~~~~--------------------------------~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ 376 (455)
++........ ........||+.|+|||++. ..++.++|||||||++|
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ 227 (363)
T cd05628 148 CTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (363)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHH
Confidence 8754321100 00012357999999999764 46789999999999999
Q ss_pred HHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhcc-C-cCCCCCHHHHHH
Q psy5603 377 ELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVF-E-KDKRASMRDIVD 447 (455)
Q Consensus 377 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~-d-p~~RPs~~evl~ 447 (455)
||++|..||...........+......+. +.+ ...++..+.++|.++|.. . +..||++.|+++
T Consensus 228 ell~G~~Pf~~~~~~~~~~~i~~~~~~~~--~p~------~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 228 EMLIGYPPFCSETPQETYKKVMNWKETLI--FPP------EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHcCcCccc--CCC------cCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 99999999987664433333322111110 000 011233466667665542 2 445799999875
No 86
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.3e-39 Score=308.97 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=196.8
Q ss_pred CccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 176 NKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
++||+|+||.||+|.+.. +..||+|.+...... .....+.+|+++++++.||||+++++++...
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 68 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA------------AGKKEFLREASVMAQLDHPCIVRLIGVCKGE 68 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch------------HHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC
Confidence 369999999999998642 268999998643321 1145588999999999999999999998888
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++|+|.+++... ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~nili~~~~~~kl~df~~~~ 143 (257)
T cd05060 69 PLMLVMELAPLGPLLKYLKKR---REIPVSDLKELAHQVAMGMAYLES--KHFVHRDLAARNVLLVNRHQAKISDFGMSR 143 (257)
T ss_pred ceEEEEEeCCCCcHHHHHHhC---CCCCHHHHHHHHHHHHHHHHHHhh--cCeeccCcccceEEEcCCCcEEeccccccc
Confidence 889999999999999999863 368999999999999999999999 889999999999999999999999999988
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
................++..|+|||.+. +.++.++|+|||||++|||++ |.+||...+.......+.... ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~----- 217 (257)
T cd05060 144 ALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE-RL----- 217 (257)
T ss_pred eeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC-cC-----
Confidence 6544322111112223456899999654 467889999999999999998 999998765432222221111 00
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+..++..+.+++.+||..+|++||++.+|++.|+++.
T Consensus 218 -----~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 218 -----PRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 011223456888999999999999999999999998763
No 87
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.7e-40 Score=315.47 Aligned_cols=248 Identities=33% Similarity=0.500 Sum_probs=189.5
Q ss_pred CCccCcCCCeEEEEEEEc-----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 175 GNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.+.||.|.||.||+|.++ .+..|+||.++.... . .....|.+|++.+++++||||++++|++.
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~------~------~~~~~~~~e~~~l~~l~h~ni~~~~g~~~ 71 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSS------E------EEEEEFLNEIQILRKLRHPNIVKLYGFCI 71 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSS------H------HHHHHHHHHHHHHHTHSBTTBE-EEEEEE
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccc------c------ccceeeeeccccccccccccccccccccc
Confidence 468999999999999987 257899999954211 0 11456899999999999999999999988
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...++|+||+++|+|.++|.... ...+++.++..|+.|++.||.|||+ ++++||||+++||+++.++.+||+|||
T Consensus 72 ~~~~~~lv~e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~--~~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 72 ENEPLFLVMEYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLHS--NNIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp SSSSEEEEEE--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHHH--TTEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ccccccccccccccccccccccccc-ccccccccccccccccccccccccc--ccccccccccccccccccccccccccc
Confidence 6 67899999999999999999852 3569999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+++...... .........+...|+|||.+. ..++.++||||||+++|||+| |..||...+............ .
T Consensus 149 ~~~~~~~~~-~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~-~--- 223 (259)
T PF07714_consen 149 LSRPISEKS-KYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ-R--- 223 (259)
T ss_dssp TGEETTTSS-SEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE-E---
T ss_pred ccccccccc-ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-c---
Confidence 988763222 112223445677899999764 457899999999999999999 789998765433222222111 1
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
...+..++..+.+++.+||..+|++||++.++++.|
T Consensus 224 -------~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 -------LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -------TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -------ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 011122344578899999999999999999999886
No 88
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.4e-39 Score=310.42 Aligned_cols=253 Identities=27% Similarity=0.436 Sum_probs=198.8
Q ss_pred cCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.++. ...||||.++.... . .....|.+|+.++++++||||+++++++
T Consensus 7 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 74 (266)
T cd05033 7 TIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSS------D------KQRLDFLTEASIMGQFDHPNIIRLEGVV 74 (266)
T ss_pred eeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCC------h------HHHHHHHHHHHHHHhCCCCCcceEeEEE
Confidence 345899999999999999752 35799999864321 1 1134588999999999999999999987
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...++||||+++++|.+++.... ..+++..++.++.|++.||.|||+ ++|+||||||+||++++++.++|+||
T Consensus 75 ~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 75 TKSRPVMIITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred ecCCceEEEEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCcceEEEcCCCCEEECcc
Confidence 66 78899999999999999997643 368999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++...... .........++..|+|||.+. ..++.++||||||+++|+|++ |..||............... ...+
T Consensus 151 g~~~~~~~~~-~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~ 228 (266)
T cd05033 151 GLSRRLEDSE-ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-YRLP 228 (266)
T ss_pred chhhcccccc-cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCCC
Confidence 9998765222 111122334567899999664 467889999999999999998 99999765533222222111 0000
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.+..++..+.+++.+|+..+|++||++.+|++.|++++
T Consensus 229 ----------~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 229 ----------PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred ----------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 01123455889999999999999999999999999874
No 89
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=3.1e-40 Score=332.31 Aligned_cols=249 Identities=22% Similarity=0.289 Sum_probs=194.6
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.++||+|+||.||++..+ +++.||+|++........ .....+.+|+.+++.++||||+++++++.+
T Consensus 46 ~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~ 115 (370)
T cd05596 46 DVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKR----------SDSAFFWEERDIMAHANSEWIVQLHYAFQDD 115 (370)
T ss_pred EEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhh----------hhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 34489999999999999986 478999999964321110 113447789999999999999999998777
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||++||+|.+++.. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NILl~~~~~~kL~DfG~~ 189 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEcCCCCEEEEeccce
Confidence 788999999999999998865 247889999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+....... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...........+......+.
T Consensus 190 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (370)
T cd05596 190 MKMDANGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT 267 (370)
T ss_pred eeccCCCc--ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC
Confidence 76543221 11234679999999997643 367899999999999999999999987764433333222111100
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCC--CCCHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
......++..+.+||.+|+..+|++ ||++.++++
T Consensus 268 --------~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 268 --------FPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred --------CCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 0011124566888999999988887 999999865
No 90
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.4e-39 Score=309.35 Aligned_cols=251 Identities=26% Similarity=0.397 Sum_probs=200.6
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|++.++||+|+||.||+|..++++.||+|.+..... ....|.+|+.++++++|+||+++++++.+.
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~--------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 73 (260)
T cd05067 8 LKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM--------------SPEAFLAEANLMKQLQHPRLVRLYAVVTQE 73 (260)
T ss_pred ceeeeeeccCccceEEeeecCCCceEEEEEecCCCC--------------cHHHHHHHHHHHHhcCCcCeeeEEEEEccC
Confidence 456689999999999999988889999999863321 134588999999999999999999988778
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+.+++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||||+||++++++.++|+|||++.
T Consensus 74 ~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 150 (260)
T cd05067 74 PIYIITEYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIER--KNYIHRDLRAANILVSETLCCKIADFGLAR 150 (260)
T ss_pred CcEEEEEcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhc--CCeecccccHHhEEEcCCCCEEEccCccee
Confidence 8899999999999999987643 3468999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. +.++.++|+||||+++||+++ |.+||............... ...
T Consensus 151 ~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~----- 222 (260)
T cd05067 151 LIEDNEYT--AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERG-YRM----- 222 (260)
T ss_pred ecCCCCcc--cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcC-CCC-----
Confidence 65432211 122345677899999664 457889999999999999999 99999866533222211111 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+...+..+.+++.+|+..+|++||+++++.+.|+++
T Consensus 223 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 260 (260)
T cd05067 223 -----PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF 260 (260)
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence 00112344588899999999999999999999999863
No 91
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.9e-40 Score=326.81 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=198.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceee
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.|++.+.||+|+||.||+|.+. +++.||+|+++.... . .....+..|+.++.++ +|+||++
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~------~------~~~~~~~~E~~~~~~l~~h~niv~ 75 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT------A------SEYKALMTELKILIHIGHHLNVVN 75 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC------H------HHHHHHHHHHHHHHhhccCcchhh
Confidence 4567799999999999999743 247899999864221 1 0134577899999999 8999999
Q ss_pred ecccccC--ceeEEEEEeccCCCHHHHHhhcCC-----------------------------------------------
Q psy5603 244 LLGLCNN--IMNCIVYEYMCNGSLYDRLARVNN----------------------------------------------- 274 (455)
Q Consensus 244 l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 274 (455)
++++|.. ...++++||+++++|.+++.....
T Consensus 76 ~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (337)
T cd05054 76 LLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSD 155 (337)
T ss_pred eeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhh
Confidence 9997754 567899999999999999864321
Q ss_pred -----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeee
Q psy5603 275 -----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYT 343 (455)
Q Consensus 275 -----------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~ 343 (455)
..++++..+..++.|++.||.|||+ ++|+||||||+|||+++++.+||+|||+++....... ....
T Consensus 156 ~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-~~~~ 232 (337)
T cd05054 156 VEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-YVRK 232 (337)
T ss_pred cccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-hhhc
Confidence 1268999999999999999999999 8899999999999999999999999999986543221 1122
Q ss_pred ccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHH
Q psy5603 344 ENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVE 421 (455)
Q Consensus 344 ~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 421 (455)
....++..|+|||++ ...++.++|||||||++|||++ |..||.................. ...+....
T Consensus 233 ~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 302 (337)
T cd05054 233 GDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR----------MRAPEYAT 302 (337)
T ss_pred cCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC----------CCCCccCC
Confidence 344667889999955 5568999999999999999998 99999764322111111111100 00111233
Q ss_pred HHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 422 TLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 422 ~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+.+++.+||+.+|++||++.+|++.|++++.
T Consensus 303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 457888999999999999999999999999874
No 92
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.3e-40 Score=326.08 Aligned_cols=238 Identities=27% Similarity=0.375 Sum_probs=186.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHH-HHhhCCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ-TLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||+||+|.++ +|+.||||++........ .....+..|.. +++.++||||+++++.+.+ ..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~ 70 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKK----------KEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADK 70 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhh----------hHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCE
Confidence 36999999999999986 589999999965322110 01233445554 4678999999999997766 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~givH~dikp~NIll~~~~~~kl~Dfg~~~~ 145 (323)
T cd05575 71 LYFVLDYVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (323)
T ss_pred EEEEEcCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHeEECCCCcEEEeccCCCcc
Confidence 8999999999999999876 3468999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......+.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~------ 216 (323)
T cd05575 146 GIEHS---KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK------ 216 (323)
T ss_pred cccCC---CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC------
Confidence 32221 12335679999999997644 578899999999999999999999987654333333222211111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
...+..+.++|.+|+..+|++||++.
T Consensus 217 ------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 217 ------PNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred ------CCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 12244578899999999999999985
No 93
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.2e-40 Score=324.54 Aligned_cols=241 Identities=24% Similarity=0.345 Sum_probs=187.8
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++ +++.||||+++...... ......+..|..++.++ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~ 70 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVND----------DEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESR 70 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCE
Confidence 36999999999999986 47899999997542211 11144578899999988 79999999998876 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~ 145 (329)
T cd05588 71 LFFVIEFVSGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKE 145 (329)
T ss_pred EEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEECcCccccc
Confidence 89999999999999988763 469999999999999999999999 8899999999999999999999999999874
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch---------hhHHHhhhccc
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI---------LYYYLVVEQEV 402 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~---------~~~~~~~~~~~ 402 (455)
..... .......||+.|+|||++.+ .++.++|+|||||++|||+||..||+..... .....+.....
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (329)
T cd05588 146 GIRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI 222 (329)
T ss_pred cccCC---CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC
Confidence 32211 11334689999999997654 5788999999999999999999999743210 01111111111
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC------HHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS------MRDIV 446 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs------~~evl 446 (455)
.++ ..++..+.++|.+||..||.+||+ +.+++
T Consensus 223 ~~p------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 223 RIP------------RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred CCC------------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 111 123445788999999999999997 55664
No 94
>KOG1095|consensus
Probab=100.00 E-value=2.6e-40 Score=353.19 Aligned_cols=255 Identities=29% Similarity=0.440 Sum_probs=206.3
Q ss_pred CCCccCcCCCeEEEEEEEcC--Cc----EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN--GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~--~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
....||+|.||.||.|...+ |. .||||.++.... ......|.+|..+|++++|||||+++|+
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~------------~~~~~~Fl~Ea~~m~~f~HpNiv~liGv 763 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSS------------EQEVSDFLKEALLMSKFDHPNIVSLIGV 763 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCC------------HHHHHHHHHHHHHHhcCCCcceeeEEEe
Confidence 45789999999999999763 33 489999875432 1125669999999999999999999999
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN----TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
|.+ ..+++++|||+||+|..+|+.... ...++....+.++.+||+|+.||++ +++|||||-..|+||+....+
T Consensus 764 ~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~--~~fvHRDLAaRNCLL~~~r~V 841 (1025)
T KOG1095|consen 764 CLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES--KHFVHRDLAARNCLLDERRVV 841 (1025)
T ss_pred ecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh--CCCcCcchhhhheeecccCcE
Confidence 988 788999999999999999987521 3468999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhc
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~ 400 (455)
||+|||+||.....+.... .....-...|||||.+ .+.++.|||||||||++||++| |..||.+.+..........+
T Consensus 842 KIaDFGlArDiy~~~yyr~-~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~g 920 (1025)
T KOG1095|consen 842 KIADFGLARDIYDKDYYRK-HGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEG 920 (1025)
T ss_pred EEcccchhHhhhhchheec-cCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhC
Confidence 9999999996655543321 1111223469999976 4789999999999999999999 99999988754433322221
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
. . -.++..++..+.+++.+||..+|++||++..+++++..+++
T Consensus 921 g-R----------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 921 G-R----------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred C-c----------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 1 1 12234566667799999999999999999999999988764
No 95
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.5e-40 Score=332.55 Aligned_cols=250 Identities=20% Similarity=0.285 Sum_probs=189.2
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||++.+. +++.||||+.. ...+.+|++++++++||||+++++++.
T Consensus 93 ~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-------------------~~~~~~E~~il~~l~HpnIv~~~~~~~ 153 (391)
T PHA03212 93 GFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-------------------RGGTATEAHILRAINHPSIIQLKGTFT 153 (391)
T ss_pred CcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-------------------hhhhHHHHHHHHhCCCCCCCCEeEEEE
Confidence 4667799999999999999986 47899999753 122678999999999999999999776
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...|+|+|++ +++|..++... ..+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||
T Consensus 154 ~~~~~~lv~e~~-~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~--~~IvHrDiKP~NIll~~~~~vkL~DFG 227 (391)
T PHA03212 154 YNKFTCLILPRY-KTDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHE--NRIIHRDIKAENIFINHPGDVCLGDFG 227 (391)
T ss_pred ECCeeEEEEecC-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHhEEEcCCCCEEEEeCC
Confidence 6 7889999998 57898888763 358999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcc--------hhhHHHhhh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT--------ILYYYLVVE 399 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~--------~~~~~~~~~ 399 (455)
+++....... .......||+.|+|||++.+ .++.++|||||||++|||+||..||..... .........
T Consensus 228 ~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~ 305 (391)
T PHA03212 228 AACFPVDINA--NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRR 305 (391)
T ss_pred cccccccccc--cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHH
Confidence 9875432211 11234689999999997644 678999999999999999999988764321 000000000
Q ss_pred -cccc----------hhhcc-------chhcc---CCC-hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 -QEVP----------VREVL-------DKEAG---EWN-ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~~~----------~~~~~-------d~~~~---~~~-~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+ +.... ..... .|. ...++..+.+||.+|+..||++|||+.|+++
T Consensus 306 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 306 SGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred hcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 00000 00000 000 1134556888999999999999999999985
No 96
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.5e-39 Score=313.80 Aligned_cols=252 Identities=27% Similarity=0.440 Sum_probs=197.4
Q ss_pred CCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+.+.||+|+||.||+|...+ +..||||.++.... . .....|.+|++++++++|+||++++++
T Consensus 9 ~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~l~~l~~~~i~~~~~~ 76 (280)
T cd05049 9 LKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS------N------DARKDFEREAELLTNFQHENIVKFYGV 76 (280)
T ss_pred HHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC------H------HHHHHHHHHHHHHHhcCCCCchheeeE
Confidence 34889999999999998642 47899999864321 1 013568999999999999999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCC-----------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEE
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN-----------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 315 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NIL 315 (455)
+.. ...++||||+++++|.+++...+. ...+++.++..++.|++.|+.|||+ ++++||||||+||+
T Consensus 77 ~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~h~dlkp~nil 154 (280)
T cd05049 77 CTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS--QHFVHRDLATRNCL 154 (280)
T ss_pred EecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh--CCeeccccccceEE
Confidence 877 788999999999999999975421 3458899999999999999999999 88999999999999
Q ss_pred EcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhh
Q psy5603 316 LDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILY 393 (455)
Q Consensus 316 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~ 393 (455)
++.++.+||+|||+++........ .......++..|+|||++. +.++.++|||||||++|||++ |..||........
T Consensus 155 i~~~~~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~ 233 (280)
T cd05049 155 VGYDLVVKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEV 233 (280)
T ss_pred EcCCCeEEECCcccceecccCcce-ecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 999999999999998754332211 1122345678899999664 467889999999999999999 9999977654332
Q ss_pred HHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......... ...+..++..+.+++.+||..+|++||++.||++.|++
T Consensus 234 ~~~~~~~~~-----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 234 IECITQGRL-----------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HHHHHcCCc-----------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 222211110 01112344568899999999999999999999999864
No 97
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.5e-39 Score=322.73 Aligned_cols=255 Identities=25% Similarity=0.343 Sum_probs=194.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++.++ ++..+|+|.++.... . .....+.+|++++++++||||+++++++.+
T Consensus 7 y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (333)
T cd06650 7 FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK------P------AIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (333)
T ss_pred hheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC------H------HHHHHHHHHHHHHHHCCCCcccceeEEEEE
Confidence 455699999999999999987 478899998864321 0 113458899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||+++|+|.+++.. ...+++..+..++.+++.||.|||+. .+++||||||+|||++.++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~l~~~l~~lH~~-~~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 75 DGEISICMEHMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred CCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhc-CCEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 888999999999999999976 34589999999999999999999972 3699999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cccc---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP--- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~--- 403 (455)
+....... .....||..|+|||.+.+ .++.++|+|||||++|||++|..||.............. ....
T Consensus 151 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (333)
T cd06650 151 SGQLIDSM-----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAES 225 (333)
T ss_pred chhhhhhc-----cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCcccc
Confidence 87543221 234579999999997654 578899999999999999999999986543222111100 0000
Q ss_pred -------------------------hhhccch----hccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -------------------------VREVLDK----EAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -------------------------~~~~~d~----~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+. .....+....+..+.+|+.+||..||++||++.|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~ 298 (333)
T cd06650 226 ETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298 (333)
T ss_pred ccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence 0000000 0001111123456889999999999999999999964
No 98
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-39 Score=338.97 Aligned_cols=249 Identities=21% Similarity=0.286 Sum_probs=195.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcC--CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
|.+.+.||+|+||.||+|.... +..||+|.+..... . ....+.+|+.+++.++||||+++++++.
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~------~-------~~~~~~~E~~~l~~l~Hpniv~~~~~~~ 135 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDE------R-------QAAYARSELHCLAACDHFGIVKHFDDFK 135 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCH------H-------HHHHHHHHHHHHHhCCCCCEeEEEEEEE
Confidence 4566899999999999998653 56788887642211 1 1345778999999999999999999887
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
. +..|+||||++||+|.+++... ....++++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+||
T Consensus 136 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivHrDlkp~NIll~~~~~~kL~DF 213 (478)
T PTZ00267 136 SDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS--RKMMHRDLKSANIFLMPTGIIKLGDF 213 (478)
T ss_pred ECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh--CCEEECCcCHHhEEECCCCcEEEEeC
Confidence 6 8889999999999999988642 224578999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++...... .........||+.|+|||++.+ .++.++|||||||++|||+||..||..................
T Consensus 214 gla~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--- 289 (478)
T PTZ00267 214 GFSKQYSDSV-SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--- 289 (478)
T ss_pred cCceecCCcc-ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC---
Confidence 9998654322 1112345679999999997644 5788999999999999999999999876543322222211110
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ .+..++..+.++|.+||..+|++||++.+++.
T Consensus 290 ---~-----~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 ---P-----FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---C-----CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0 01123445888999999999999999999864
No 99
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.7e-40 Score=323.95 Aligned_cols=237 Identities=24% Similarity=0.344 Sum_probs=184.4
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|..+ +++.||+|+++...... ......+.+|+.++.++ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 70 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND----------DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 70 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc----------hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCE
Confidence 36999999999999986 47899999997542211 01134577899888776 89999999998766 88
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~E~~~~~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~--~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~ 145 (329)
T cd05618 71 LFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHE--RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE 145 (329)
T ss_pred EEEEEeCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCCEEEeeCCcccc
Confidence 89999999999999988763 469999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch---------hhHHHhhhccc
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI---------LYYYLVVEQEV 402 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~---------~~~~~~~~~~~ 402 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...... .....+.....
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~ 222 (329)
T cd05618 146 GLRPG---DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 222 (329)
T ss_pred ccCCC---CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC
Confidence 32221 11234689999999997654 5788999999999999999999999632210 01111111111
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.+ +..++..+.++|.+||..||++||+.
T Consensus 223 ~~------------p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 223 RI------------PRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CC------------CCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11 11234457889999999999999984
No 100
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.4e-39 Score=309.25 Aligned_cols=248 Identities=25% Similarity=0.402 Sum_probs=191.8
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|.++ +++.||+|.+..... . .....|.+|++++++++||||+++++++.. ...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 68 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLP------P------DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI 68 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCC------H------HHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCe
Confidence 36999999999999986 588999998753211 0 113458899999999999999999998877 778
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+++..
T Consensus 69 ~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 144 (252)
T cd05084 69 YIVMELVQGGDFLTFLRTE--GPRLKVKELIQMVENAAAGMEYLES--KHCIHRDLAARNCLVTEKNVLKISDFGMSREE 144 (252)
T ss_pred EEEEeeccCCcHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheEEEcCCCcEEECccccCccc
Confidence 9999999999999998753 2468999999999999999999999 88999999999999999999999999998754
Q ss_pred ccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... ........++..|+|||.+ .+.++.++|+|||||++|||++ |..||............... ..
T Consensus 145 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~-~~-------- 214 (252)
T cd05084 145 EDGVY-ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQG-VR-------- 214 (252)
T ss_pred ccccc-cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcC-CC--------
Confidence 32211 1111112234569999965 4467889999999999999998 99999765432221111110 00
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
...+..++..+.+++.+|+..+|++||++.+|++.|++
T Consensus 215 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 215 --LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred --CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence 01112234568889999999999999999999998863
No 101
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.7e-39 Score=308.03 Aligned_cols=254 Identities=29% Similarity=0.393 Sum_probs=197.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++.||+|+||.||+|... ++..||+|.+........ .......+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~--------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 75 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPE--------TKKEVNALECEIQLLKNLQHERIVQYYGCLRD 75 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchh--------hHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc
Confidence 345599999999999999875 489999999864432111 01114568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||+
T Consensus 76 ~~~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nilv~~~~~~~l~dfg~ 150 (263)
T cd06625 76 DETLSIFMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHS--NMIVHRDIKGANILRDSAGNVKLGDFGA 150 (263)
T ss_pred CCeEEEEEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 8889999999999999998763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++................|+..|+|||.+.+ .++.++||||||+++|||++|..||..................
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~----- 225 (263)
T cd06625 151 SKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN----- 225 (263)
T ss_pred ceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC-----
Confidence 8754332211111134568889999997654 5788999999999999999999999765432222111111100
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
...+..++..+.+++.+||..+|++||++.++++.
T Consensus 226 -----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 -----PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00112344558889999999999999999999763
No 102
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.4e-39 Score=310.06 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=195.2
Q ss_pred CCCccCcCCCeEEEEEEEcC-Cc--EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+++.||+|+||.||+|.+.. +. .||+|.++.... . ......|.+|++++++++|+||+++++++..
T Consensus 3 i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~------~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (272)
T cd05075 3 LGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC------T-----RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQ 71 (272)
T ss_pred cccccCcccCceEEEeEEccCCCeeeEEEEecccCcC------C-----HHHHHHHHHHHHHHHhCCCCCcceEEEEEcc
Confidence 45889999999999999864 32 589998864321 0 0114568899999999999999999997632
Q ss_pred -------ceeEEEEEeccCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 251 -------IMNCIVYEYMCNGSLYDRLARVN---NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 251 -------~~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
...++|+||+++|+|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||+++++
T Consensus 72 ~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~Nil~~~~~ 149 (272)
T cd05075 72 TVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS--KSFIHRDLAARNCMLNENM 149 (272)
T ss_pred CCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhheEEcCCC
Confidence 24589999999999999874321 13458999999999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||+++........ .......+++.|+|||.+. ..++.++|||||||++|||++ |..||.............
T Consensus 150 ~~kl~Dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~ 228 (272)
T cd05075 150 NVCVADFGLSKKIYNGDYY-RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR 228 (272)
T ss_pred CEEECCCCcccccCcccce-ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence 9999999998865433211 1112335677899999664 457899999999999999999 899997655332222222
Q ss_pred hcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.... . .....++..+.+++.+||..+|.+||++.++++.|++++
T Consensus 229 ~~~~-~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 229 QGNR-L----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred cCCC-C----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 1110 0 011223455889999999999999999999999999864
No 103
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.7e-39 Score=308.64 Aligned_cols=247 Identities=25% Similarity=0.422 Sum_probs=195.5
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||+|.++++..||||.+..... ....|.+|+.++++++||||+++++++.. .
T Consensus 7 ~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd05113 7 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM--------------SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR 72 (256)
T ss_pred EEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc--------------cHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 45588999999999999987667799999864321 12348899999999999999999998876 6
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+.+|+|.+++.... ..+++.+++.++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||.++
T Consensus 73 ~~~lv~e~~~~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 73 PIYIVTEYMSNGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLES--KQFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred CcEEEEEcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCCEEECCCccce
Confidence 7799999999999999987643 268999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......++..|+|||.+. +.++.++|+|||||++|||+| |..||..................
T Consensus 149 ~~~~~~~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~------ 220 (256)
T cd05113 149 YVLDDEY--TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL------ 220 (256)
T ss_pred ecCCCce--eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC------
Confidence 6543321 1112234567899999764 467889999999999999999 99999766533222222211110
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..+...+..+.+++.+||..+|.+||++.++++.|+
T Consensus 221 -----~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 -----YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 011122455788999999999999999999998764
No 104
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.2e-40 Score=331.15 Aligned_cols=252 Identities=22% Similarity=0.273 Sum_probs=190.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|... +++.||||++...... .......+.+|+.++++++||||+++++.+.+
T Consensus 3 f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~----------~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~ 72 (382)
T cd05625 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVL----------LRNQVAHVKAERDILAEADNEWVVRLYYSFQD 72 (382)
T ss_pred cEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhh----------hHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe
Confidence 455689999999999999976 4789999998643210 01124568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~--~~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 73 KDNLYFVMDYIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEEeECCC
Confidence 7889999999999999999763 358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCc--------------------------------------------ceeeeccCCCCCCCCCccccc-CCCCc
Q psy5603 330 VKMSETSNM--------------------------------------------KTMYTENLTGTRPYMPPEAMH-CQIST 364 (455)
Q Consensus 330 a~~~~~~~~--------------------------------------------~~~~~~~~~gt~~Y~aPE~~~-~~~~~ 364 (455)
++....... .........||+.|+|||++. ..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~ 227 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 227 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCC
Confidence 753210000 000112357999999999664 46889
Q ss_pred ccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC---
Q psy5603 365 KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS--- 441 (455)
Q Consensus 365 ~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs--- 441 (455)
++|||||||++|||++|.+||...+.......+....... .......++....++|.++| .+|++|++
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL--------HIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc--------CCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 9999999999999999999998765433222222111110 00011223445677777776 58999987
Q ss_pred HHHHHH
Q psy5603 442 MRDIVD 447 (455)
Q Consensus 442 ~~evl~ 447 (455)
+.++++
T Consensus 299 ~~ei~~ 304 (382)
T cd05625 299 ADEIKA 304 (382)
T ss_pred HHHHhc
Confidence 777654
No 105
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.8e-40 Score=322.94 Aligned_cols=242 Identities=27% Similarity=0.350 Sum_probs=187.4
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHH-HHHhhCCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEV-QTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|.++. ++.||+|++........ .....+..|. .+++.++||||+++++++.+ +.
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----------~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~ 70 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK----------KEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 70 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh----------hHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCe
Confidence 369999999999999874 67899999974321100 0122234444 45678999999999998766 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~--~giiHrDlkp~Nili~~~~~~kl~DfG~a~~ 145 (325)
T cd05602 71 LYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIASALGYLHS--LNIVYRDLKPENILLDSQGHIVLTDFGLCKE 145 (325)
T ss_pred EEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHeEECCCCCEEEccCCCCcc
Confidence 89999999999999999763 358889999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|.+||...+.......+......+.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~------ 216 (325)
T cd05602 146 NIEHN---GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK------ 216 (325)
T ss_pred cccCC---CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC------
Confidence 33221 12345679999999997654 578899999999999999999999987664433333322211111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..++..+.++|.+|+..+|.+||++.+.+.
T Consensus 217 ------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 217 ------PNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred ------CCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 123455888999999999999999875443
No 106
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.9e-39 Score=312.17 Aligned_cols=254 Identities=25% Similarity=0.412 Sum_probs=197.5
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCc----EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.++||+|+||+||+|.+. +|. .||+|+++.... . .....+.+|+.+++.+.||||++++++
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~------~------~~~~~~~~e~~~l~~~~~~~i~~~~~~ 77 (279)
T cd05109 10 KKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS------P------KANKEILDEAYVMAGVGSPYVCRLLGI 77 (279)
T ss_pred eeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC------H------HHHHHHHHHHHHHHhcCCCCCceEEEE
Confidence 44589999999999999864 343 489999864321 0 113458899999999999999999999
Q ss_pred ccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.....+++++|+++|+|.+++.... ..+++..++.++.|++.||.|||+ ++++||||||+|||+++++.+||+||
T Consensus 78 ~~~~~~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~~iiH~dlkp~Nil~~~~~~~kL~df 153 (279)
T cd05109 78 CLTSTVQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLEE--VRLVHRDLAARNVLVKSPNHVKITDF 153 (279)
T ss_pred EcCCCcEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccccceEEEcCCCcEEECCC
Confidence 98877889999999999999987532 368999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++....... ........++..|+|||.. .+.++.++|||||||++|||++ |..||................ ...
T Consensus 154 G~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~ 231 (279)
T cd05109 154 GLARLLDIDET-EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGE-RLP 231 (279)
T ss_pred Cceeecccccc-eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-cCC
Confidence 99886643321 1111223456789999965 4568899999999999999998 999998665332222222111 000
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.+..++..+.+++.+||..||++||++.++++.|+++..
T Consensus 232 ----------~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 232 ----------QPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred ----------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 011233457888999999999999999999999988754
No 107
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2.5e-39 Score=310.16 Aligned_cols=258 Identities=22% Similarity=0.314 Sum_probs=201.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+.+ +++.||||.++...... ......+.+|++++++++||||+++++++.+
T Consensus 4 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (267)
T cd08228 4 FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD----------AKARQDCVKEIDLLKQLNHPNVIKYLDSFIE 73 (267)
T ss_pred eeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC----------HHHHHHHHHHHHHHHhCCCcceeeeeeeEEE
Confidence 455689999999999999976 58999999886432111 0114558899999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..++|+||+++|+|.+++..... ...+++..+..++.|++.||.|||+ ++++|+||||+||+++.++.++|+|||
T Consensus 74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 74 DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHS--RRVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhh--CCeeCCCCCHHHEEEcCCCCEEECccc
Confidence 788999999999999998864322 3468999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|++.|+|||.+. ...+.++|+||||+++|||++|..||...................
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~--- 225 (267)
T cd08228 152 LGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY--- 225 (267)
T ss_pred cceeccchhH---HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC---
Confidence 9886543221 123457889999999664 467889999999999999999999997654221111111011000
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
...+....+..+.+++.+||..+|.+||++.+|++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 226 -----PPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -----CCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1111234456688999999999999999999999999875
No 108
>KOG0589|consensus
Probab=100.00 E-value=1.9e-40 Score=326.72 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=209.3
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|+..+.+|+|+||.+++++.+ +++.|++|++......... .....+|+.++++++|||||.+.+.+.
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-----------r~~A~~E~~lis~~~hP~iv~y~ds~~ 73 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-----------RRSAIQEMDLLSKLLHPNIVEYKDSFE 73 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-----------hHHHHHHHHHHHhccCCCeeeeccchh
Confidence 3566799999999999999876 4789999999765542221 234789999999999999999999776
Q ss_pred C-ce-eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 250 N-IM-NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 250 ~-~~-~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
. +. .|+||+||.||+|.+.+.+.. +.-+++..++.++.|++.|+.|||+ +.|+|||||++||++..++.+||+||
T Consensus 74 ~~~~~l~Ivm~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~--~~iLHRDlK~~Nifltk~~~VkLgDf 150 (426)
T KOG0589|consen 74 EDGQLLCIVMEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHE--NRVLHRDLKCANIFLTKDKKVKLGDF 150 (426)
T ss_pred cCCceEEEEEeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHh--hhhhcccchhhhhhccccCceeecch
Confidence 5 66 899999999999999998876 4679999999999999999999998 78999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+|+...... .......||+.||+||++.+ .|+.|+|||||||++|||++-+++|...+.......+....
T Consensus 151 GlaK~l~~~~---~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~----- 222 (426)
T KOG0589|consen 151 GLAKILNPED---SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL----- 222 (426)
T ss_pred hhhhhcCCch---hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhcc-----
Confidence 9999876543 23567899999999998876 57999999999999999999999999887554444443221
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.++ -+..++..++.+|..|+..+|..||++.+++..
T Consensus 223 -~~P-----lp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -YSP-----LPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CCC-----CCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 111 123456668999999999999999999999875
No 109
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.1e-39 Score=326.45 Aligned_cols=241 Identities=24% Similarity=0.314 Sum_probs=186.1
Q ss_pred CCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.++||+|+||.||+|.++ +++.||||++..... . .....+.+|++++++++|+||+++++++.+ +.
T Consensus 79 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 146 (353)
T PLN00034 79 VNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHE------D------TVRRQICREIEILRDVNHPNVVKCHDMFDHNGE 146 (353)
T ss_pred hhhccCCCCeEEEEEEECCCCCEEEEEEEecCCc------H------HHHHHHHHHHHHHHhCCCCCcceeeeEeccCCe
Confidence 378999999999999976 489999999854321 0 113558899999999999999999998877 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++||||+.+|+|.+. ...++..+..++.|++.||.|||+ ++|+||||||+|||+++++.+||+|||+++.
T Consensus 147 ~~lv~e~~~~~~L~~~-------~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~ 217 (353)
T PLN00034 147 IQVLLEFMDGGSLEGT-------HIADEQFLADVARQILSGIAYLHR--RHIVHRDIKPSNLLINSAKNVKIADFGVSRI 217 (353)
T ss_pred EEEEEecCCCCccccc-------ccCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEccccccee
Confidence 8999999999998653 235678888999999999999999 8899999999999999999999999999886
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-----C-CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-----Q-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~-~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
...... ......||..|+|||.+.. . .+.++|||||||++|||++|..||..................
T Consensus 218 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~--- 291 (353)
T PLN00034 218 LAQTMD---PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMS--- 291 (353)
T ss_pred cccccc---cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhcc---
Confidence 543211 1234579999999997632 2 345899999999999999999999854322211111100000
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
........++..+.+||.+||..+|++||++.|+++
T Consensus 292 -----~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~ 327 (353)
T PLN00034 292 -----QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQ 327 (353)
T ss_pred -----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000011234456889999999999999999999986
No 110
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.6e-39 Score=313.16 Aligned_cols=255 Identities=26% Similarity=0.420 Sum_probs=199.1
Q ss_pred cCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+.+.||+|+||.||++... ++..+|+|.+..... .....+.+|++++++++||||+++++
T Consensus 8 ~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 74 (288)
T cd05093 8 VLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASD-------------NARKDFHREAELLTNLQHEHIVKFYG 74 (288)
T ss_pred eeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCH-------------HHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 34588999999999999852 245689998853211 11445889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEE
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVN----------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVL 315 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NIL 315 (455)
++.. ...++||||+++++|.+++.... ....+++.+++.++.|++.||.|||+ +|++||||||+||+
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~--~~i~H~dlkp~Nil 152 (288)
T cd05093 75 VCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS--QHFVHRDLATRNCL 152 (288)
T ss_pred EEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcceEE
Confidence 8877 88899999999999999997532 12358999999999999999999999 88999999999999
Q ss_pred EcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhh
Q psy5603 316 LDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILY 393 (455)
Q Consensus 316 l~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~ 393 (455)
+++++.+||+|||+++....... ........++..|+|||.+. ..++.++|+|||||++|||+| |.+||........
T Consensus 153 i~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~ 231 (288)
T cd05093 153 VGENLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV 231 (288)
T ss_pred EccCCcEEeccCCccccccCCce-eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999875543221 11123345678899999765 457889999999999999999 9999987654332
Q ss_pred HHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
...+...... . . ....+..+.+++.+|+..+|.+||++.+|.+.|+++.+
T Consensus 232 ~~~i~~~~~~--~----~-----~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 232 IECITQGRVL--Q----R-----PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHHHcCCcC--C----C-----CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 2222211100 0 0 11233458889999999999999999999999998764
No 111
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.3e-39 Score=312.51 Aligned_cols=254 Identities=24% Similarity=0.416 Sum_probs=195.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
|++.+.||+|+||.||+|.++ .+..||||++..... . .....|.+|+.+++.++||||++++
T Consensus 8 ~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~------~~~~~~~~e~~~l~~l~~~~iv~~~ 75 (277)
T cd05062 8 ITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS------M------RERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred ceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC------H------HHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 345589999999999999764 246799998753211 0 0134588999999999999999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
+++.+ ...++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+ .+++||||||+||+++
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~~vH~dlkp~Nil~~ 153 (277)
T cd05062 76 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA--NKFVHRDLAARNCMVA 153 (277)
T ss_pred EEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCcchheEEEc
Confidence 98876 788999999999999999875332 2346888999999999999999999 8899999999999999
Q ss_pred CCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHH
Q psy5603 318 ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 318 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
+++.+||+|||+++......... ......++..|+|||.+. +.++.++|||||||++|||++ |..||..........
T Consensus 154 ~~~~~~l~dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~ 232 (277)
T cd05062 154 EDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLR 232 (277)
T ss_pred CCCCEEECCCCCccccCCcceee-cCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 99999999999987554332111 112235678899999764 467899999999999999999 789997665332222
Q ss_pred HhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
...... ... .+..++..+.+++.+||..+|++||++.++++.|++
T Consensus 233 ~~~~~~--~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 233 FVMEGG--LLD---------KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred HHHcCC--cCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 221111 000 112234568889999999999999999999998864
No 112
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8e-40 Score=330.20 Aligned_cols=252 Identities=20% Similarity=0.277 Sum_probs=191.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++..+ +++.||||++...... .......+.+|++++++++||||+++++++.+
T Consensus 3 y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~ 72 (377)
T cd05629 3 FHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF----------KKDQLAHVKAERDVLAESDSPWVVSLYYSFQD 72 (377)
T ss_pred ceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH----------HhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc
Confidence 455689999999999999876 5889999998643211 11124568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++... ..+++..+..++.|++.||.|||+ .||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~--~givHrDlkp~NIll~~~~~~kl~DfGl 147 (377)
T cd05629 73 AQYLYLIMEFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHK--LGFIHRDIKPDNILIDRGGHIKLSDFGL 147 (377)
T ss_pred CCeeEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEEEeeccc
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcc----------e----------------------------------eeeccCCCCCCCCCccccc-CCCCc
Q psy5603 330 VKMSETSNMK----------T----------------------------------MYTENLTGTRPYMPPEAMH-CQIST 364 (455)
Q Consensus 330 a~~~~~~~~~----------~----------------------------------~~~~~~~gt~~Y~aPE~~~-~~~~~ 364 (455)
++........ . .......||+.|+|||++. ..++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ 227 (377)
T cd05629 148 STGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQ 227 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCC
Confidence 8632110000 0 0001246999999999664 46789
Q ss_pred ccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCC---CCC
Q psy5603 365 KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDK---RAS 441 (455)
Q Consensus 365 ~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~---RPs 441 (455)
++|||||||++|||+||.+||...........+......+ .......++..+.+||.+|+. +|.+ |++
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 228 ECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETL--------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred ceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc--------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 9999999999999999999998765433322222111000 000111234568888999887 6555 569
Q ss_pred HHHHHH
Q psy5603 442 MRDIVD 447 (455)
Q Consensus 442 ~~evl~ 447 (455)
+.++++
T Consensus 299 ~~~~l~ 304 (377)
T cd05629 299 AHEIKS 304 (377)
T ss_pred HHHHhc
Confidence 988875
No 113
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.9e-39 Score=312.80 Aligned_cols=247 Identities=21% Similarity=0.278 Sum_probs=189.8
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||+||++.++ +++.||+|++....... ......+..|++++++++|+||+++.+++.. ...|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~l 70 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKK----------RKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCL 70 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhh----------hHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEE
Confidence 799999999999976 57899999986432110 0113457889999999999999999997766 78899
Q ss_pred EEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
||||+++|+|.+++.... ....+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||++....
T Consensus 71 v~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 148 (280)
T cd05608 71 VMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQ--RRIIYRDLKPENVLLDNDGNVRISDLGLAVELK 148 (280)
T ss_pred EEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEeeCccceecC
Confidence 999999999998875432 24579999999999999999999999 889999999999999999999999999987654
Q ss_pred cCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhcc
Q psy5603 335 TSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAG 413 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 413 (455)
.... ......||+.|+|||++. +.++.++|+|||||++|||++|..||............... ......
T Consensus 149 ~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~------~~~~~~- 218 (280)
T cd05608 149 DGQS---KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR------ILNDSV- 218 (280)
T ss_pred CCCc---cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHh------hcccCC-
Confidence 3221 123457999999999664 46788999999999999999999999865422111111000 000000
Q ss_pred CCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 414 EWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..+..++..+.+++.+||..+|++|| +++++++
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 -TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred -CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 00123455688899999999999999 6677764
No 114
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.7e-40 Score=330.29 Aligned_cols=250 Identities=22% Similarity=0.290 Sum_probs=192.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++..+. ++.||+|++....... ......+.+|+.+++.++||||+++++++.+
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK----------RSDSAFFWEERDIMAFANSPWVVQLFCAFQD 114 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 3455899999999999999874 7889999986432111 0113457889999999999999999998777
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.. ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~--~~IvHrDLKp~NILl~~~~~~kL~DFG~ 188 (370)
T cd05621 115 DKYLYMVMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHS--MGLIHRDVKPDNMLLDKHGHLKLADFGT 188 (370)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEEeccc
Confidence 788999999999999999865 248899999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
+........ .......||+.|+|||++.+ .++.++|+|||||++|||++|..||...........+......+
T Consensus 189 a~~~~~~~~--~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (370)
T cd05621 189 CMKMDETGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 266 (370)
T ss_pred ceecccCCc--eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc
Confidence 886543221 11235689999999997643 26789999999999999999999998766433322222111110
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCC--CCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
. ......++..+++++.+|+..++++ |+++.++++
T Consensus 267 ~--------~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~ 303 (370)
T cd05621 267 N--------FPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQ 303 (370)
T ss_pred C--------CCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhc
Confidence 0 0011234566788888888755543 899999876
No 115
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=3.9e-39 Score=317.12 Aligned_cols=197 Identities=24% Similarity=0.374 Sum_probs=159.0
Q ss_pred CCccCcCCCeEEEEEEEc---CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 175 GNKLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++||+|+||.||+|..+ +++.||+|.+..... ...+.+|+.++++++||||+++++++..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---------------SMSACREIALLRELKHPNVISLQKVFLSH 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---------------cHHHHHHHHHHHhcCCCCCcceeeeEecC
Confidence 478999999999999865 357899999864321 1236789999999999999999997633
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE----cC
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVN------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL----DE 318 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl----~~ 318 (455)
...|+||||+ +++|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||+ +.
T Consensus 71 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivHrDlkp~Nil~~~~~~~ 147 (317)
T cd07868 71 ADRKVWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred CCcEEEEEEecc-CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEecCCCC
Confidence 5678999998 568888875422 12358999999999999999999999 889999999999999 46
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCc
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~ 389 (455)
++.+||+|||+++................||+.|+|||++.+ .++.++||||+||++|||++|.+||....
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred cCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 689999999999865433221122345688999999997654 46889999999999999999999997543
No 116
>KOG0610|consensus
Probab=100.00 E-value=1.1e-39 Score=312.05 Aligned_cols=248 Identities=25% Similarity=0.336 Sum_probs=202.8
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
++||.|.-|+||++..++ +..+|+|++.+..... .....+.+.|-+||+.+.||.++.||+.+.. ...
T Consensus 83 k~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~----------rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~ 152 (459)
T KOG0610|consen 83 KRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLAS----------RKKLKRAQTEREILSLLDHPFLPTLYASFETDKYS 152 (459)
T ss_pred HHcCCCCceeEEEEEecCCCceEEEEEecHHHHhh----------hhHHHHHHHHHHHHHhcCCCccchhhheeecccee
Confidence 789999999999999885 5889999997654422 2225668889999999999999999998877 888
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+|||||+||+|..+++++. +..+++..+..++.+++.||+|||- .|||+|||||+||||-++|++.|+||.|+...
T Consensus 153 cl~meyCpGGdL~~LrqkQp-~~~fse~~aRFYaAEvl~ALEYLHm--lGivYRDLKPENILvredGHIMLsDFDLS~~~ 229 (459)
T KOG0610|consen 153 CLVMEYCPGGDLHSLRQKQP-GKRFSESAARFYAAEVLLALEYLHM--LGIVYRDLKPENILVREDGHIMLSDFDLSLRC 229 (459)
T ss_pred EEEEecCCCccHHHHHhhCC-CCccchhhHHHHHHHHHHHHHHHHh--hceeeccCCcceeEEecCCcEEeeeccccccC
Confidence 99999999999999888765 4679999999999999999999999 78999999999999999999999999886322
Q ss_pred ccC----------------------------------C-------------------cceeeeccCCCCCCCCCcccccC
Q psy5603 334 ETS----------------------------------N-------------------MKTMYTENLTGTRPYMPPEAMHC 360 (455)
Q Consensus 334 ~~~----------------------------------~-------------------~~~~~~~~~~gt~~Y~aPE~~~~ 360 (455)
... . ........++||-.|+|||++.|
T Consensus 230 ~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G 309 (459)
T KOG0610|consen 230 PVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG 309 (459)
T ss_pred CCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec
Confidence 110 0 00011234689999999998876
Q ss_pred -CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCC
Q psy5603 361 -QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKR 439 (455)
Q Consensus 361 -~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~R 439 (455)
+-+.++|+|+|||++||||.|..||.+.+.......+..++..+++. ..++...++||.+.|.+||++|
T Consensus 310 ~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~----------~~vs~~akDLIr~LLvKdP~kR 379 (459)
T KOG0610|consen 310 EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE----------PEVSSAAKDLIRKLLVKDPSKR 379 (459)
T ss_pred CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC----------CcchhHHHHHHHHHhccChhhh
Confidence 56889999999999999999999999988766666655544443322 2456679999999999999999
Q ss_pred CC----HHHHH
Q psy5603 440 AS----MRDIV 446 (455)
Q Consensus 440 Ps----~~evl 446 (455)
.. ++||.
T Consensus 380 lg~~rGA~eIK 390 (459)
T KOG0610|consen 380 LGSKRGAAEIK 390 (459)
T ss_pred hccccchHHhh
Confidence 87 66653
No 117
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=8.1e-40 Score=336.32 Aligned_cols=254 Identities=22% Similarity=0.290 Sum_probs=188.0
Q ss_pred CCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|+++++||+|+||.||+|... +++.||||++.... ....+|+.++++++||||+++++++
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----------------~~~~~Ei~il~~l~h~niv~l~~~~ 128 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----------------QYKNRELLIMKNLNHINIIFLKDYY 128 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----------------chHHHHHHHHHhcCCCCCcceeeeE
Confidence 44677799999999999999986 47899999885321 1145799999999999999998864
Q ss_pred cC---------ceeEEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 249 NN---------IMNCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 249 ~~---------~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
.. ...++||||++ ++|.+++... .....+++..+..++.|++.||+|||+ ++|+||||||+|||++.
T Consensus 129 ~~~~~~~~~~~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~--~~IiHrDLKp~NILl~~ 205 (440)
T PTZ00036 129 YTECFKKNEKNIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHS--KFICHRDLKPQNLLIDP 205 (440)
T ss_pred eecccccCCCceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCcCHHHEEEcC
Confidence 21 24578999996 5777776532 224579999999999999999999999 88999999999999996
Q ss_pred CC-ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHH
Q psy5603 319 NF-VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 319 ~~-~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
++ .+||+|||+++....... .....||+.|+|||++.+ .++.++|||||||++|||+||.+||.+........
T Consensus 206 ~~~~vkL~DFGla~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~ 281 (440)
T PTZ00036 206 NTHTLKLCDFGSAKNLLAGQR----SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV 281 (440)
T ss_pred CCCceeeeccccchhccCCCC----cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence 64 799999999986543221 224578999999997644 57899999999999999999999998765322211
Q ss_pred Hhhh--cccch---------------hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 396 LVVE--QEVPV---------------REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~--~~~~~---------------~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.. ..... +...........+...+..+.+||.+||..+|.+||++.|+++
T Consensus 282 ~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 282 RIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 1111 11000 0000000000011123456889999999999999999999874
No 118
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.9e-39 Score=337.84 Aligned_cols=252 Identities=27% Similarity=0.335 Sum_probs=197.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||+||+|.+. +|+.||||++...... ......+.+|+.++..++|+|++++...+.
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~-----------~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~ 101 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS-----------EADKNRAQAEVCCLLNCDFFSIVKCHEDFA 101 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC-----------HHHHHHHHHHHHHHhcCCCCcEEEeeccee
Confidence 3456699999999999999875 5899999998654221 011455889999999999999999887543
Q ss_pred C---------ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC
Q psy5603 250 N---------IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 250 ~---------~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
. ...++||||+++|+|.+++.... ...++++..+..++.|++.||.|||+ ++|+||||||+|||++.+
T Consensus 102 ~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~--~~IiHrDLKP~NILl~~~ 179 (496)
T PTZ00283 102 KKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHS--KHMIHRDIKSANILLCSN 179 (496)
T ss_pred cccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEeCC
Confidence 2 13579999999999999987533 24579999999999999999999999 889999999999999999
Q ss_pred CceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhh
Q psy5603 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
+.+||+|||+++....... ........||+.|+|||++.+ .++.++|||||||++|||++|..||.............
T Consensus 180 ~~vkL~DFGls~~~~~~~~-~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~ 258 (496)
T PTZ00283 180 GLVKLGDFGFSKMYAATVS-DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL 258 (496)
T ss_pred CCEEEEecccCeecccccc-ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 9999999999886543221 112345689999999997654 57899999999999999999999998765433222221
Q ss_pred hcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... + .+..++..+.+++.+||..+|.+||++.++++
T Consensus 259 ~~~~~------~-----~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~ 296 (496)
T PTZ00283 259 AGRYD------P-----LPPSISPEMQEIVTALLSSDPKRRPSSSKLLN 296 (496)
T ss_pred cCCCC------C-----CCCCCCHHHHHHHHHHcccChhhCcCHHHHHh
Confidence 11100 0 01223456888999999999999999999876
No 119
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=3.3e-39 Score=312.39 Aligned_cols=253 Identities=25% Similarity=0.433 Sum_probs=195.8
Q ss_pred cCCCccCcCCCeEEEEEEEc-----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.+.||+|+||.||+|... .+..||+|.+..... . .....|.+|+.++++++||||++++++
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~------~------~~~~~~~~E~~~l~~l~h~niv~~~~~ 75 (283)
T cd05090 8 RFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINN------P------QQWGEFQQEASLMAELHHPNIVCLLGV 75 (283)
T ss_pred eeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCC------H------HHHHHHHHHHHHHhhCCCCCeeeEEEE
Confidence 45588999999999999852 357899999864221 0 113458899999999999999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCC--------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCC
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN--------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~ 312 (455)
+.. ...|+||||+++++|.+++..... ...+++.++..++.+++.||.|||+ ++++||||||+
T Consensus 76 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~ 153 (283)
T cd05090 76 VTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS--HFFVHKDLAAR 153 (283)
T ss_pred EecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--cCeehhccccc
Confidence 766 788999999999999999864221 2347899999999999999999999 88999999999
Q ss_pred cEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcc
Q psy5603 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
|||+++++.+||+|||+++....... ........++..|+|||.+. +.++.++|+|||||++|||++ |..||.+...
T Consensus 154 nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~ 232 (283)
T cd05090 154 NILIGEQLHVKISDLGLSREIYSADY-YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN 232 (283)
T ss_pred eEEEcCCCcEEeccccccccccCCcc-eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999886543321 11223445677899999664 567889999999999999999 9999977553
Q ss_pred hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
........... ... .+..++..+.+++.+|+..+|.+||++.+|.+.|..
T Consensus 233 ~~~~~~~~~~~--~~~---------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 233 QEVIEMVRKRQ--LLP---------CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHHcCC--cCC---------CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 22222111111 000 111234457889999999999999999999998864
No 120
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.7e-40 Score=325.78 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=196.3
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||++..+ +|+.||||+++...... ......+.+|+.+++.++|+||+++++++.+
T Consensus 3 y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~ 72 (330)
T cd05601 3 FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLA----------QETVSFFEEERDILSISNSPWIPQLQYAFQD 72 (330)
T ss_pred ceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCCcceeeEEec
Confidence 445689999999999999976 48899999997542210 1124558899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~--~~i~H~Dlkp~NIll~~~~~~kL~Dfg~ 148 (330)
T cd05601 73 KDNLYLVMEYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQ--MGYVHRDIKPENVLIDRTGHIKLADFGS 148 (330)
T ss_pred CCeEEEEECCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEcccCchHheEECCCCCEEeccCCC
Confidence 78899999999999999998742 369999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+......... ......||+.|+|||++. ..++.++|||||||++|||++|..||...........+.....
T Consensus 149 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~ 226 (330)
T cd05601 149 AARLTANKMV--NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQR 226 (330)
T ss_pred CeECCCCCce--eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCC
Confidence 9865433211 223457999999999764 3467899999999999999999999987654333222221110
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+ .+ .....++..+.+||.+|+. +|.+||++.++++
T Consensus 227 ~~-~~-------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 227 FL-KF-------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred cc-CC-------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 00 00 0011244557888988887 9999999999874
No 121
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.2e-39 Score=313.15 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=199.5
Q ss_pred cCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
.+.+.||+|+||.||+|... ++..+++|.+..... .....+.+|++++++++|+||+++++
T Consensus 8 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~i~~~~~ 74 (291)
T cd05094 8 VLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-------------AARKDFQREAELLTNLQHEHIVKFYG 74 (291)
T ss_pred EEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-------------HHHHHHHHHHHHHhcCCCCCcceEEE
Confidence 34488999999999999853 245689998753221 11345889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCC
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~ 312 (455)
++.+ ...++||||+++++|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~H~dlkp~ 152 (291)
T cd05094 75 VCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS--QHFVHRDLATR 152 (291)
T ss_pred EEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccCcc
Confidence 8877 788999999999999999975321 2348999999999999999999999 88999999999
Q ss_pred cEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcc
Q psy5603 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
||+++.++.++|+|||++........ ........|+..|+|||.+. ..++.++|||||||++|||+| |..||.....
T Consensus 153 Nil~~~~~~~~l~dfg~a~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 231 (291)
T cd05094 153 NCLVGANLLVKIGDFGMSRDVYSTDY-YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN 231 (291)
T ss_pred eEEEccCCcEEECCCCcccccCCCce-eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 99999999999999999876543321 11123456788999999654 467889999999999999999 9999977654
Q ss_pred hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
........... ... .....+..+.+++.+|+..+|++||++.+|++.|+++.+
T Consensus 232 ~~~~~~~~~~~--~~~---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 232 TEVIECITQGR--VLE---------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284 (291)
T ss_pred HHHHHHHhCCC--CCC---------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHh
Confidence 33222221111 000 011234558899999999999999999999999998754
No 122
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.8e-39 Score=308.22 Aligned_cols=256 Identities=21% Similarity=0.368 Sum_probs=196.7
Q ss_pred cCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+++.||+|+||.||+|.+.. +..||||+++..... ......+.+|+..++.++||||+++++++
T Consensus 2 ~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 70 (273)
T cd05035 2 KLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-----------YSEIEEFLSEAACMKDFDHPNVMKLIGVC 70 (273)
T ss_pred ccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-----------HHHHHHHHHHHHHHHhCCCCCeeeEEeee
Confidence 456899999999999998752 367999998643220 01134589999999999999999999976
Q ss_pred cC-c------eeEEEEEeccCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 249 NN-I------MNCIVYEYMCNGSLYDRLARVN---NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 249 ~~-~------~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
.. . ..++|+||+++|+|..++.... ....+++..+..++.|++.||.|||+ .+++||||||+||++++
T Consensus 71 ~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~--~~i~H~dlkp~Nil~~~ 148 (273)
T cd05035 71 FEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN--RNFIHRDLAARNCMLRE 148 (273)
T ss_pred ccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh--CCeeccccchheEEECC
Confidence 54 3 3689999999999999885532 12468999999999999999999999 88999999999999999
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHH
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
++.+||+|||+++......... ......++..|+|||.+. ..++.++|||||||++|||++ |..||...........
T Consensus 149 ~~~~kl~dfg~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~ 227 (273)
T cd05035 149 DMTVCVADFGLSKKIYSGDYYR-QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY 227 (273)
T ss_pred CCeEEECCccceeecccccccc-ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999999999988654432111 112234567899999764 457889999999999999999 9999976653322222
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..... .. ..+..++..+.+++.+||..+|++||++.+|++.|++++
T Consensus 228 ~~~~~-~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 228 LRHGN-RL----------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred HHcCC-CC----------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 11110 00 001223455888899999999999999999999998864
No 123
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=5.2e-39 Score=306.45 Aligned_cols=246 Identities=27% Similarity=0.444 Sum_probs=194.3
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||+|.++++..+|+|.+..... . ...|.+|+.++++++||||+++++++.. .
T Consensus 7 ~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~------~--------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05059 7 TFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM------S--------EDDFIEEAKVMMKLSHPNLVQLYGVCTKQR 72 (256)
T ss_pred chhhhhccCCCceEEEeEecCCccEEEEEeccCCC------C--------HHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 45588999999999999988777899999853221 0 2347889999999999999999998777 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||+++++|.+++.... ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 73 PIFIVTEYMANGCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLES--NGFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred ceEEEEecCCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCcccccccHhhEEECCCCcEEECCcccce
Confidence 7899999999999999997643 268999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. +.++.++|+||||+++|||+| |..||...+........... ...
T Consensus 149 ~~~~~~~~--~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~----- 220 (256)
T cd05059 149 YVLDDQYT--SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAG-YRL----- 220 (256)
T ss_pred eccccccc--ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcC-CcC-----
Confidence 65432211 111223455799999664 567889999999999999999 89999765533222221111 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
..+..++..+.+++.+|+..+|++||++.++++.|
T Consensus 221 -----~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 -----YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 01122455688999999999999999999999886
No 124
>KOG0032|consensus
Probab=100.00 E-value=2.4e-39 Score=322.53 Aligned_cols=251 Identities=27% Similarity=0.387 Sum_probs=210.8
Q ss_pred CCCCcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecc
Q psy5603 169 KPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLG 246 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 246 (455)
...|++++.||+|.||.||++..+. |+.+|+|.+.+....... ....+.+|+.+|+++. |||||.+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~----------~~~~v~~Ev~il~~l~~hpniv~l~~ 103 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE----------DREDVRREVAILQQLSGHPNIVQLKD 103 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc----------cHHHHHHHHHHHHhccCCCCEEEEEE
Confidence 3457778999999999999999885 999999999876542221 1345889999999998 999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC----CCc
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE----NFV 321 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~----~~~ 321 (455)
.+.+ ...++|||++.||.|.+++... .+++..+..++.|++.|++|||+ .|++||||||+|+|+.. ++.
T Consensus 104 ~~e~~~~~~lvmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH~--~gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 104 AFEDPDSVYLVMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLHS--LGVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred EEEcCCeEEEEEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHHh--CCceeccCCHHHeeeccccCCCCc
Confidence 8887 8889999999999999999885 29999999999999999999999 88999999999999953 358
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
+|++|||++....... ....++||+.|+|||++. ..++..+|+||+||++|.|++|.+||.+.........+...
T Consensus 178 ik~~DFGla~~~~~~~----~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~ 253 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKPGE----RLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRG 253 (382)
T ss_pred EEEeeCCCceEccCCc----eEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcC
Confidence 9999999999876522 245679999999999886 57899999999999999999999999998866555544433
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ......+.++..++++|..++..||.+|+++.++++
T Consensus 254 ~~~--------f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 254 DFD--------FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCC--------CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 321 111223456778999999999999999999999986
No 125
>KOG0599|consensus
Probab=100.00 E-value=3.1e-40 Score=299.88 Aligned_cols=250 Identities=26% Similarity=0.420 Sum_probs=209.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||.|..+.|-++..+ +|..+|+|++...+....... .......-.+|+.||+++ .||||+++.+++.. ..
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~-----~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGET-----PYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCcc-----HHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 88999999999998876 588999999976544332221 222345567899999998 79999999998877 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++|+|.|+.|.|+|+|.. .-.+++....+|+.|+..|+.|||. ++||||||||+|||+|++..+||+|||++..
T Consensus 98 ~FlVFdl~prGELFDyLts---~VtlSEK~tR~iMrqlfegVeylHa--~~IVHRDLKpENILlddn~~i~isDFGFa~~ 172 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTS---KVTLSEKETRRIMRQLFEGVEYLHA--RNIVHRDLKPENILLDDNMNIKISDFGFACQ 172 (411)
T ss_pred hhhhhhhcccchHHHHhhh---heeecHHHHHHHHHHHHHHHHHHHH--hhhhhcccChhheeeccccceEEeccceeec
Confidence 8999999999999999987 4569999999999999999999999 8899999999999999999999999999987
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-------CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-------QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-------~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
...... -...+|||+|+|||.+.. +|+..+|.||+||++|.+|.|.+||....+..+...+..+...+.
T Consensus 173 l~~Gek----LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~ 248 (411)
T KOG0599|consen 173 LEPGEK----LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFR 248 (411)
T ss_pred cCCchh----HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccC
Confidence 765542 346799999999997743 477899999999999999999999998888777777766543321
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+++...++||.+|+..||.+|.|++|++.
T Consensus 249 --------speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 249 --------SPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred --------CcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1223567778999999999999999999999875
No 126
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.7e-39 Score=317.37 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=196.9
Q ss_pred CCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeee
Q psy5603 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
|.....|++.++||+|+||.||+|+++ +++.||+|+++....... ...+.+|+.++++++||||+++
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA------------PCTAIREVSLLKDLKHANIVTL 69 (309)
T ss_pred CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc------------chhHHHHHHHHHhCCCCCcceE
Confidence 445556777899999999999999986 478899999864332110 2236789999999999999999
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
++++.. ...|+||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~--~~ivH~dlkp~Nill~~~~~~k 144 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLD-KDLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHR--RKVLHRDLKPQNLLINERGELK 144 (309)
T ss_pred EEEEeeCCeEEEEEeCCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEE
Confidence 998766 78899999996 58888886543 358899999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||+++....... ......+|+.|+|||.+.+ .++.++|||||||++|||+||.+||...+.......... .
T Consensus 145 l~Dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 221 (309)
T cd07872 145 LADFGLARAKSVPTK---TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLL 221 (309)
T ss_pred ECccccceecCCCcc---ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh
Confidence 999999875433221 1223468999999997643 468899999999999999999999987653222211111 0
Q ss_pred ccch----hhc------cchhccCC-------ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPV----REV------LDKEAGEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~----~~~------~d~~~~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+. +.. .+...... ....++..+.+||.+|+..||++||++.|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 222 GTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred CCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0000 000 00000000 00124556789999999999999999999876
No 127
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.8e-39 Score=313.26 Aligned_cols=256 Identities=26% Similarity=0.354 Sum_probs=197.8
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.+.||+|+||.||+|.... ...+|+|.+..... . .....+.+|+.+++.++||||+++++
T Consensus 3 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 3 VLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS------S------SELRDLLSEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred cccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC------H------HHHHHHHHHHHHHhhCCCCCEeeEEE
Confidence 456899999999999998641 35688888853321 0 11355889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcC---------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVN---------------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~i 304 (455)
.+.. ...++|+||+.+|+|.+++.... ...++++..++.++.|++.||.|||+ .++
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~i 148 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE--MKL 148 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH--CCe
Confidence 8766 78899999999999999986421 12358899999999999999999999 889
Q ss_pred eecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CC
Q psy5603 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GM 382 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~ 382 (455)
+||||||+|||+++++.+||+|||+++........ .......++..|+|||.+ ...++.++||||||+++|||+| |.
T Consensus 149 vH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~ 227 (290)
T cd05045 149 VHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSY-VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGG 227 (290)
T ss_pred ehhhhhhheEEEcCCCcEEeccccccccccCccch-hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999998765332211 112234567789999965 4457889999999999999999 99
Q ss_pred CCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.||.+............. .. ...+..++..+.+++.+|+..+|++||++.++++.|++++.
T Consensus 228 ~p~~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 228 NPYPGIAPERLFNLLKTG-YR----------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCCHHHHHHHHhCC-CC----------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 999776533322222110 00 00112234457889999999999999999999999999864
No 128
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.2e-39 Score=322.35 Aligned_cols=241 Identities=25% Similarity=0.346 Sum_probs=187.0
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHH-HHhhCCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ-TLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|..+ +|+.||||++....... ......+..|.. +++.++||||+++++++.. ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~ 70 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN----------RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEK 70 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCE
Confidence 36999999999999976 58899999996542211 011233555554 4677999999999997766 88
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++.. ..++++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~--~givH~Dlkp~NIll~~~~~~kL~DfG~~~~ 145 (325)
T cd05604 71 LYFVLDFVNGGELFFHLQR---ERSFPEPRARFYAAEIASALGYLHS--INIVYRDLKPENILLDSQGHVVLTDFGLCKE 145 (325)
T ss_pred EEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEEeecCCccc
Confidence 8999999999999998876 3468999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+..............+.
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~------ 216 (325)
T cd05604 146 GIAQS---DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR------ 216 (325)
T ss_pred CCCCC---CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC------
Confidence 32221 11235679999999997654 578899999999999999999999987664333332222211111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
...+..+.++|.+|+..+|++||++.+.+
T Consensus 217 ------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 217 ------PGASLTAWSILEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred ------CCCCHHHHHHHHHHhccCHHhcCCCCCCH
Confidence 11334477889999999999999886433
No 129
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3e-39 Score=312.75 Aligned_cols=265 Identities=25% Similarity=0.373 Sum_probs=196.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
.+++.+.||+|+||.||+|..+ ++..||+|+++.... . ....|.+|++++++++||||++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~iv~~~ 71 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTA------E-------HLRDFEREIEILKSLQHDNIVKYK 71 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCH------H-------HHHHHHHHHHHHHhCCCCCeeEEE
Confidence 3456689999999999999743 478899999864321 1 134588999999999999999999
Q ss_pred ccccC---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 246 GLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 246 ~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+++.. ...++|+||+++|+|.+++.... ..+++..++.++.|++.||.|||+ +|++||||||+||++++++.+
T Consensus 72 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~--~~i~H~dlkp~nili~~~~~~ 147 (284)
T cd05081 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGS--KRYVHRDLATRNILVESENRV 147 (284)
T ss_pred EEEccCCCCceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCCHhhEEECCCCeE
Confidence 96533 46789999999999999987532 358999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcc
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
||+|||+++................++..|+|||.+. +.++.++|+|||||++|||++|..|+................
T Consensus 148 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~ 227 (284)
T cd05081 148 KIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQ 227 (284)
T ss_pred EECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccc
Confidence 9999999987644321111112223445699999664 457889999999999999999987765432211100000000
Q ss_pred --c---chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 402 --V---PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 402 --~---~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
. .+.+.+...........++..+.+|+.+||..+|++|||+.+|++.|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 228 GQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred cccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0 00011111111112234456688999999999999999999999999876
No 130
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.6e-39 Score=313.91 Aligned_cols=251 Identities=21% Similarity=0.281 Sum_probs=194.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++... +++.||||++....... ......+.+|+.++++++||||+++++.+.+
T Consensus 2 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 71 (285)
T cd05605 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK----------RKGEAMALNEKQILEKVNSRFVVSLAYAYET 71 (285)
T ss_pred ceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhh----------hhhHHHHHHHHHHHHhcCCCCEeeeeeeecC
Confidence 455689999999999999975 48899999986432210 0113447789999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||++++++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 72 KDALCLVLTLMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLHR--ERIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred CCeEEEEEeccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHH--CCcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 78899999999999999886533 3468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++....... .....||..|+|||++. ..++.++|||||||++|||++|..||............... +
T Consensus 149 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~---~---- 217 (285)
T cd05605 149 AVEIPEGET----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR---V---- 217 (285)
T ss_pred ceecCCCCc----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH---h----
Confidence 876543221 12357899999999664 46788999999999999999999999875432111111100 0
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
...... .+..++..+.+|+.+|+..||.+|| +++++++
T Consensus 218 ~~~~~~-~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 218 KEDQEE-YSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred hhcccc-cCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 000000 1123455688899999999999999 7878754
No 131
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.7e-39 Score=312.83 Aligned_cols=253 Identities=24% Similarity=0.375 Sum_probs=197.3
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.+.||+|+||.||+|.+.+ +..||||+++.... . .....|.+|+.+++.++||||+++++
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~~~~l~h~~iv~~~~ 75 (283)
T cd05091 8 RFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE------G------PLREEFKHEAMMRSRLQHPNIVCLLG 75 (283)
T ss_pred HHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC------H------HHHHHHHHHHHHHhcCCCCCcCeEEE
Confidence 344789999999999998642 47899999864321 0 11345889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCC
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVN-------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSA 312 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~ 312 (455)
++.+ ...+++++|+++++|.+++.... ....+++..+..++.|++.||.|||+ ++++||||||+
T Consensus 76 ~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~--~gi~H~dlkp~ 153 (283)
T cd05091 76 VVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS--HHVVHKDLATR 153 (283)
T ss_pred EEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--cCccccccchh
Confidence 8877 77899999999999999985321 12358889999999999999999999 88999999999
Q ss_pred cEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcc
Q psy5603 313 NVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNT 390 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~ 390 (455)
||++++++.+||+|||+++....... ........+++.|+|||.+ .+.++.++|||||||++|||+| |..||.+...
T Consensus 154 Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 232 (283)
T cd05091 154 NVLVFDKLNVKISDLGLFREVYAADY-YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN 232 (283)
T ss_pred heEecCCCceEecccccccccccchh-eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99999999999999999886543321 1112344567899999965 5678899999999999999998 8889877654
Q ss_pred hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......+..... . ..+..++..+.+++.+|++.+|.+||++++|+..|+.
T Consensus 233 ~~~~~~i~~~~~--~---------~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 233 QDVIEMIRNRQV--L---------PCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHHHHcCCc--C---------CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 322222211110 0 0112345668889999999999999999999999875
No 132
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.8e-39 Score=307.42 Aligned_cols=252 Identities=26% Similarity=0.438 Sum_probs=196.3
Q ss_pred CCccCcCCCeEEEEEEEcC-C---cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 175 GNKLGEGQFGTVYYGKLKN-G---MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.+.||+|+||.||+|..+. + ..+|+|.++.... . .....+.+|++++++++|||++++++++.+
T Consensus 10 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (268)
T cd05063 10 QKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT------E------KQRQDFLSEASIMGQFSHHNIIRLEGVVTK 77 (268)
T ss_pred eeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC------H------HHHHHHHHHHHHHhcCCCCCeeEEEEEEcc
Confidence 3889999999999999753 3 3689998854321 0 113458899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.... ..+++.++..++.+++.||+|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~dlkp~Nili~~~~~~kl~dfg~ 153 (268)
T cd05063 78 FKPAMIITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSD--MNYVHRDLAARNILVNSNLECKVSDFGL 153 (268)
T ss_pred CCCcEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccchhhEEEcCCCcEEECCCcc
Confidence 78899999999999999987633 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+..................+..|+|||.+. +.++.++|||||||++|||++ |..||...........+.. ....+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~-~~~~~-- 230 (268)
T cd05063 154 SRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIND-GFRLP-- 230 (268)
T ss_pred ceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhc-CCCCC--
Confidence 876543322111112223355799999664 467889999999999999998 9999976654322222211 11111
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....++..+.+++.+|+..+|++||++.+|++.|++++
T Consensus 231 --------~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 231 --------APMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred --------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 11123455788999999999999999999999999874
No 133
>KOG0660|consensus
Probab=100.00 E-value=4e-40 Score=311.00 Aligned_cols=263 Identities=24% Similarity=0.383 Sum_probs=200.0
Q ss_pred CCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeee
Q psy5603 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
|....+|...+.||+|+||.|..+.++ +|+.||||++..... .....++-.+|+++|+.++|+||+.+
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~-----------~~~~akRtlRElklLr~~~HeNIi~l 86 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFE-----------NQIDAKRTLRELKLLRHLRHENIIGL 86 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhh-----------chHHHHHHHHHHHHHHHhcCCCcceE
Confidence 333344444588999999999999986 589999999863322 12235668899999999999999999
Q ss_pred ccccc-----C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 245 LGLCN-----N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 245 ~~~~~-----~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
++... . ...|+|+|+| +.+|...+.. ...++......++.|+++||.|+|+ .+++|||+||+|+|++.
T Consensus 87 ~di~~p~~~~~f~DvYiV~elM-etDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHS--AnViHRDLKPsNll~n~ 160 (359)
T KOG0660|consen 87 LDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHS--ANVIHRDLKPSNLLLNA 160 (359)
T ss_pred EeecccccccccceeEEehhHH-hhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhc--ccccccccchhheeecc
Confidence 88542 2 5779999999 6788888886 3459999999999999999999999 78999999999999999
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc--cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHH
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM--HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~--~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~ 396 (455)
+...||+|||+||..... .....-+..+.|..|.|||++ ...++.+.||||.|||+.||++|++-|.+.+...-...
T Consensus 161 ~c~lKI~DFGLAR~~~~~-~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~l 239 (359)
T KOG0660|consen 161 DCDLKICDFGLARYLDKF-FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQL 239 (359)
T ss_pred CCCEEeccccceeecccc-CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHH
Confidence 999999999999987644 122223456889999999954 33689999999999999999999999998874322222
Q ss_pred hhh--cccc-----------hhhccchhccCCCh-------hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 397 VVE--QEVP-----------VREVLDKEAGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 397 ~~~--~~~~-----------~~~~~d~~~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.. +..+ ...++.... ..+. ..+.....+|+.+||..||.+|+|++|.++
T Consensus 240 I~~~lGtP~~e~l~~i~s~~ar~yi~slp-~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 240 ILELLGTPSEEDLQKIRSEKARPYIKSLP-QIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhcCCCCHHHHHHhccHHHHHHHHhCC-CCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 211 1000 111111111 1110 234456778999999999999999999875
No 134
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=9.9e-40 Score=329.40 Aligned_cols=252 Identities=21% Similarity=0.270 Sum_probs=191.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+ +++.||||++....... ......+.+|+.++++++||||+++++.+.+
T Consensus 3 y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~ 72 (376)
T cd05598 3 FVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLM----------RNQAAHVKAERDILAEADNEWVVKLYYSFQD 72 (376)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHh----------hhhHHHHHHHHHHHHhCCCCCcceEEEEEEc
Confidence 566799999999999999976 48899999986432100 1114558899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nill~~~~~ikL~DFG~ 147 (376)
T cd05598 73 KDNLYFVMDYIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGL 147 (376)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEeCCCCHHHEEECCCCCEEEEeCCC
Confidence 8889999999999999999763 458999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCc----------------------------------------ceeeeccCCCCCCCCCcccccC-CCCcccch
Q psy5603 330 VKMSETSNM----------------------------------------KTMYTENLTGTRPYMPPEAMHC-QISTKTDV 368 (455)
Q Consensus 330 a~~~~~~~~----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv 368 (455)
+........ .........||+.|+|||++.+ .++.++||
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 227 (376)
T cd05598 148 CTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 227 (376)
T ss_pred CccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceee
Confidence 753210000 0001123579999999997644 57889999
Q ss_pred HHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC---CHHHH
Q psy5603 369 FSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA---SMRDI 445 (455)
Q Consensus 369 ~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP---s~~ev 445 (455)
|||||++|||++|..||...........+........ ......++..+.++|.+|| .+|.+|+ ++.++
T Consensus 228 wSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~--------~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 228 WSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLH--------IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred eeccceeeehhhCCCCCCCCCHHHHHHHHhccCcccc--------CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 9999999999999999987764332222211111100 0001123445677787765 5999999 78887
Q ss_pred HH
Q psy5603 446 VD 447 (455)
Q Consensus 446 l~ 447 (455)
++
T Consensus 299 l~ 300 (376)
T cd05598 299 KA 300 (376)
T ss_pred hC
Confidence 64
No 135
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.6e-39 Score=319.32 Aligned_cols=238 Identities=26% Similarity=0.327 Sum_probs=185.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHH-HHhhCCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ-TLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|+++ +++.||+|++....... ......+..|.. +++.++||||+++++++.+ ..
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~ 70 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK----------KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEK 70 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH----------hhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCE
Confidence 36999999999999986 47899999986432210 011233445554 5788999999999998766 88
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+.+.. ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~lH~--~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~ 145 (321)
T cd05603 71 LYFVLDYVNGGELFFHLQR---ERCFLEPRARFYAAEVASAIGYLHS--LNIIYRDLKPENILLDSQGHVVLTDFGLCKE 145 (321)
T ss_pred EEEEEcCCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEccCCCCcc
Confidence 8999999999999998876 3458899999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......||+.|+|||.+.+ .++.++|||||||++|||++|..||...+.......+......++
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~------ 216 (321)
T cd05603 146 GVEPE---ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP------ 216 (321)
T ss_pred CCCCC---CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC------
Confidence 32221 12345679999999997644 578899999999999999999999987764333333222211111
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
...+..+.++|.+|+..+|.+||+..
T Consensus 217 ------~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 217 ------GGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred ------CCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 12234578889999999999999764
No 136
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.2e-39 Score=307.50 Aligned_cols=250 Identities=29% Similarity=0.425 Sum_probs=199.7
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.++||.|+||.||+|.++++..+|+|.+..... . ....+.+|+.+++.++||||+++++++.+ .
T Consensus 9 ~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 75 (261)
T cd05148 9 TLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL------L-------KQQDFQKEVQALKRLRHKHLISLFAVCSVGE 75 (261)
T ss_pred HHhhhhccCCCccEEEeEecCCCcEEEEeccccch------h-------hHHHHHHHHHHHhcCCCcchhheeeeEecCC
Confidence 34588999999999999998889999999864321 0 13458899999999999999999998877 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++.++..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~--~~i~h~dl~~~nilv~~~~~~kl~d~g~~~ 152 (261)
T cd05148 76 PVYIITELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEE--QNSIHRDLAARNILVGEDLVCKVADFGLAR 152 (261)
T ss_pred CeEEEEeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeeccccCcceEEEcCCceEEEccccchh
Confidence 7899999999999999998644 3468999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... ......++..|+|||.+ .+.++.++|+||||+++|+|++ |..||................ .
T Consensus 153 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~------ 222 (261)
T cd05148 153 LIKEDVY---LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY-R------ 222 (261)
T ss_pred hcCCccc---cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC-c------
Confidence 6543211 12234567789999965 4467889999999999999998 899997765332222221110 0
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
...+..++..+.+++.+||..+|.+||++.++.+.|+.+
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 ----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 011123345578899999999999999999999999864
No 137
>KOG1989|consensus
Probab=100.00 E-value=1.4e-39 Score=337.78 Aligned_cols=254 Identities=24% Similarity=0.309 Sum_probs=200.7
Q ss_pred cCCCccCcCCCeEEEEEEEcCC-cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccc-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNG-MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLC-N 249 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~-~ 249 (455)
++.+.|.+|||+.||+|.+..+ ..||+|++-... +.......+|+++|++|. |+|||.+++.+ .
T Consensus 40 ~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~d-------------e~~L~~v~~EI~~MK~L~gh~nIV~yidss~~ 106 (738)
T KOG1989|consen 40 TVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVND-------------EEALNAVKREIDIMKLLSGHKNIVSYIDSSAI 106 (738)
T ss_pred EEEEEEccCCcEEEEEEEecCCCceeeeeeeecCC-------------HHHHHHHHHHHHHHHHhcCCCceeeEeccccc
Confidence 4568999999999999998765 999999985431 122566889999999996 99999999922 1
Q ss_pred -----C--ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 250 -----N--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 -----~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. -+.+|+||||.||+|.|++...... .|++.++++|+.++++|+.+||....+|||||||-+||||+.+|..
T Consensus 107 ~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~-~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~ 185 (738)
T KOG1989|consen 107 NRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQT-RLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNY 185 (738)
T ss_pred cccCCCceeEEEeehhhccCCcHHHHHHHHHhc-cCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCE
Confidence 1 2457899999999999999865543 4999999999999999999999987789999999999999999999
Q ss_pred EEeecccccccccCCcce----eeec--cCCCCCCCCCcccc---cC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchh
Q psy5603 323 KLGDFGIVKMSETSNMKT----MYTE--NLTGTRPYMPPEAM---HC-QISTKTDVFSYGVILLELLTGMKPIDDNNTIL 392 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~----~~~~--~~~gt~~Y~aPE~~---~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~ 392 (455)
||||||.|.-.-...... .... ...-|+.|+|||++ .+ .+++|+|||||||+||-|+....||++.....
T Consensus 186 KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la 265 (738)
T KOG1989|consen 186 KLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA 265 (738)
T ss_pred EeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee
Confidence 999999876332221000 0000 12468999999965 33 47999999999999999999999999774321
Q ss_pred hHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+++......+...++..+.+||..||..+|.+||++.+|+..+-++.+
T Consensus 266 --------------Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 266 --------------ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred --------------EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 112222222235677889999999999999999999999999987753
No 138
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.6e-39 Score=320.00 Aligned_cols=259 Identities=24% Similarity=0.357 Sum_probs=196.1
Q ss_pred CCcCCCccCcCCCeEEEEEEE------cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceee
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKL------KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~------~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.|++.+.||+|+||.||+|.+ .+++.||||+++..... . ....+.+|+.++.++ +||||++
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~-----~-------~~~~~~~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-----S-------EHRALMSELKILIHIGHHLNVVN 75 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh-----H-------HHHHHHHHHHHHHhccCCccHhh
Confidence 456779999999999999974 23678999999643210 1 134588899999999 6899999
Q ss_pred ecccccC--ceeEEEEEeccCCCHHHHHhhcCC-----------------------------------------------
Q psy5603 244 LLGLCNN--IMNCIVYEYMCNGSLYDRLARVNN----------------------------------------------- 274 (455)
Q Consensus 244 l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~----------------------------------------------- 274 (455)
+++++.. ...++||||+++|+|.+++.....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 9997755 567899999999999999865321
Q ss_pred -----------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCC
Q psy5603 275 -----------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSN 337 (455)
Q Consensus 275 -----------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~ 337 (455)
...+++.++..++.|++.||.|||+ ++|+||||||+|||+++++.+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLAS--RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCccCeEEEcCCCcEEEEecccccccccCc
Confidence 1247888999999999999999999 889999999999999999999999999987653322
Q ss_pred cceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhccCC
Q psy5603 338 MKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEW 415 (455)
Q Consensus 338 ~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 415 (455)
. ........++..|+|||.+ ...++.++||||||+++|+|++ |..||................... ..
T Consensus 234 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~------~~--- 303 (343)
T cd05103 234 D-YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM------RA--- 303 (343)
T ss_pred c-hhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCC------CC---
Confidence 1 1112234567789999965 4567899999999999999997 999997654221111111111000 00
Q ss_pred ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 416 NETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 416 ~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+...+..+.+++..|+..+|++||++.+|++.|++++.
T Consensus 304 -~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 -PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred -CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 01122346788889999999999999999999999875
No 139
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6.6e-39 Score=307.68 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=198.5
Q ss_pred CcCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.++. +..+|+|.++.... . .....|.+|+.++++++||||++++++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~ 73 (267)
T cd05066 6 IKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYT------E------KQRRDFLSEASIMGQFDHPNIIHLEGV 73 (267)
T ss_pred eEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCC------H------HHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 3456899999999999998742 33789999854221 1 013568899999999999999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...|+||||+++++|.+++.... ..+++.+++.++.|++.||.|||+ .+++||||||+|||++.++.++|+|
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~--~~i~h~dlkp~nili~~~~~~~l~d 149 (267)
T cd05066 74 VTKSKPVMIVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSD--MGYVHRDLAARNILVNSNLVCKVSD 149 (267)
T ss_pred EecCCccEEEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEeehhhchhcEEECCCCeEEeCC
Confidence 766 78899999999999999997643 368999999999999999999999 8899999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccch
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||+++................++..|+|||.+. +.++.++|+||||+++||+++ |..||............... ...
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~~~ 228 (267)
T cd05066 150 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-YRL 228 (267)
T ss_pred CCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-CcC
Confidence 999886654322111122233456899999765 467899999999999999887 99999876533222222111 111
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
+ ....++..+.+++.+|+..+|.+||++.++++.|++++
T Consensus 229 ~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 229 P----------APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred C----------CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 0 01123445788999999999999999999999998864
No 140
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.1e-39 Score=318.19 Aligned_cols=237 Identities=24% Similarity=0.334 Sum_probs=185.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|..+ +++.||+|+++...... ......+.+|+.++.++ +||||+++++++.+ ..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 70 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHD----------DEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSR 70 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCE
Confidence 36999999999999976 47899999997542211 11145578899999888 69999999998776 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++... ..+++..+..++.|++.||+|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~ 145 (327)
T cd05617 71 LFLVIEYVNGGDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHE--RGIIYRDLKLDNVLLDADGHIKLTDYGMCKE 145 (327)
T ss_pred EEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEEeCCCCEEEecccccee
Confidence 89999999999999988763 369999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcch-------hhHHHhhhcccch
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTI-------LYYYLVVEQEVPV 404 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~-------~~~~~~~~~~~~~ 404 (455)
..... .......||+.|+|||++. ..++.++|||||||++|||++|..||...... ............+
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (327)
T cd05617 146 GLGPG---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI 222 (327)
T ss_pred ccCCC---CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC
Confidence 32211 1123468999999999764 46788999999999999999999999643210 1111111111111
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
+ ..++..+.+++.+||..||++|+++
T Consensus 223 p------------~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 223 P------------RFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred C------------CCCCHHHHHHHHHHhccCHHHcCCC
Confidence 1 1233447888999999999999985
No 141
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=3e-39 Score=312.95 Aligned_cols=267 Identities=25% Similarity=0.443 Sum_probs=198.2
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
+|++.+.||+|+||.||++.+. ++..||+|.++.... . .....+.+|++++++++||||++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~ 72 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG------G------NHIADLKKEIEILRNLYHENIVKYK 72 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc------H------HHHHHHHHHHHHHHhCCCCCeeeee
Confidence 4566689999999999999742 478899999864321 0 0134588999999999999999999
Q ss_pred ccccC---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 246 GLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 246 ~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+++.+ ...++||||++|++|.+++.... ..+++..++.++.|++.||.|||+ +|++||||||+||+++.++.+
T Consensus 73 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~--~gi~H~dlkp~Nil~~~~~~~ 148 (284)
T cd05079 73 GICTEDGGNGIKLIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGS--RQYVHRDLAARNVLVESEHQV 148 (284)
T ss_pred eEEecCCCCceEEEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecccchheEEEcCCCCE
Confidence 97755 45689999999999999987532 358999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHH-hhhc
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL-VVEQ 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~-~~~~ 400 (455)
||+|||+++................|+..|+|||.+ .+.++.++|||||||++|||+|+..|............ ....
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd05079 149 KIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHG 228 (284)
T ss_pred EECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccc
Confidence 999999988654432221222345677889999965 44678899999999999999998876543211110000 0000
Q ss_pred ccchh---hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 401 EVPVR---EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 401 ~~~~~---~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..... ..+........+..++..+.+|+.+||..+|++||++.++++.|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 229 QMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred cccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 00000 000000011112234567889999999999999999999999999874
No 142
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=8.8e-39 Score=304.72 Aligned_cols=245 Identities=29% Similarity=0.439 Sum_probs=194.4
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc-C
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN-N 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~ 250 (455)
+++.+.||+|+||.||+|..+ |..||+|.++.... ...|.+|+.++++++|+|++++++++. +
T Consensus 8 ~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~---------------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (256)
T cd05082 8 LKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT---------------AQAFLAEASVMTQLRHSNLVQLLGVIVEE 71 (256)
T ss_pred CeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch---------------HHHHHHHHHHHHhCCCCCeeeEEEEEEcC
Confidence 345589999999999999886 78899999853211 345889999999999999999999653 3
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.... ...+++..++.++.+++.||+|||+ ++++||||||+||++++++.+||+|||+
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nil~~~~~~~kl~dfg~ 148 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEA--NNFVHRDLAARNVLVSEDNVAKVSDFGL 148 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEeccccchheEEEcCCCcEEecCCcc
Confidence 67899999999999999987643 3458999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++...... ....++..|+|||++.+ .++.++|||||||++|||++ |..||................ .
T Consensus 149 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~---- 217 (256)
T cd05082 149 TKEASSTQ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY-K---- 217 (256)
T ss_pred ceeccccC------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-C----
Confidence 87543221 22345667999996644 57889999999999999998 999997654322222221110 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
......++..+.+++.+||..+|++||++.++++.|+++
T Consensus 218 ------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 218 ------MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred ------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 001123445688899999999999999999999999864
No 143
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.8e-39 Score=308.82 Aligned_cols=258 Identities=23% Similarity=0.348 Sum_probs=201.7
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|..+ ++..||||.+...... + ......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~------~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~ 74 (267)
T cd08229 5 RIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM------D----AKARADCIKEIDLLKQLNHPNVIKYYASFIED 74 (267)
T ss_pred hhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhh------h----HHHHHHHHHHHHHHHHccCCchhhhhheeEeC
Confidence 44588999999999999975 5899999988643210 0 1113568899999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++..... ...+++.+++.++.+++.||.|||+ ++++|+||||+||+++.++.++|+|||+
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~dfg~ 152 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS--RRVMHRDIKPANVFITATGVVKLGDLGL 152 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCCEEECcchh
Confidence 788999999999999998875322 4568999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|+..|+|||.+. ..++.++|+||||+++|+|++|..||.................
T Consensus 153 ~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~------ 223 (267)
T cd08229 153 GRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC------ 223 (267)
T ss_pred hhccccCCc---ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC------
Confidence 876543221 123457899999999664 4578899999999999999999999976542211111100000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.....+....+..+.+++.+|+..+|++||++.+|++.++++.
T Consensus 224 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 224 --DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred --CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0011122345667899999999999999999999999998864
No 144
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.3e-39 Score=309.41 Aligned_cols=249 Identities=25% Similarity=0.355 Sum_probs=194.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+.+ +++.||+|++..... .. ...+.+|+.++++++||||+++++++..
T Consensus 11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------~~-------~~~~~~e~~~l~~~~h~~ii~~~~~~~~ 77 (267)
T cd06646 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG------DD-------FSLIQQEIFMVKECKHCNIVAYFGSYLS 77 (267)
T ss_pred cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc------ch-------HHHHHHHHHHHHhcCCCCeeeeeEEEEe
Confidence 456699999999999999975 578999999864321 11 2347889999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.. ..++++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 78 ~~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~ 152 (267)
T cd06646 78 REKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLAYLHS--KGKMHRDIKGANILLTDNGDVKLADFGV 152 (267)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCCEEECcCcc
Confidence 788999999999999999875 3468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc----CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
++...... .......|+..|+|||.+. +.++.++|+|||||++|||++|..||....................
T Consensus 153 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06646 153 AAKITATI---AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP 229 (267)
T ss_pred ceeecccc---cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC
Confidence 87653221 1123457889999999663 3467899999999999999999999975542211111111100000
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.. .....++..+.+++.+||..+|++||+++++++.
T Consensus 230 -----~~--~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 230 -----KL--KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred -----CC--ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 00 0112344568899999999999999999999864
No 145
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.4e-39 Score=318.86 Aligned_cols=239 Identities=24% Similarity=0.317 Sum_probs=187.8
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccC-
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNN- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~- 250 (455)
..+.||+|+||.||+|..+ +|+.||||++....... ......+..|..++..+. |++|+++++++.+
T Consensus 4 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~ 73 (323)
T cd05615 4 FLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ----------DDDVECTMVEKRVLALQDKPPFLTQLHSCFQTV 73 (323)
T ss_pred EEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhccCCCchhheeeEEecC
Confidence 3488999999999999976 48899999997532211 111345778889988886 5677788887766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||++||+|.+++... ..+++.++..++.|++.||.|||+ +|++||||||+|||++.++.+||+|||++
T Consensus 74 ~~~~lv~Ey~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~--~~ivHrDikp~Nill~~~~~ikL~Dfg~~ 148 (323)
T cd05615 74 DRLYFVMEYVNGGDLMYHIQQV---GKFKEPQAVFYAAEISVGLFFLHR--RGIIYRDLKLDNVMLDSEGHIKIADFGMC 148 (323)
T ss_pred CEEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEeccccc
Confidence 7889999999999999998763 469999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
+...... .......||+.|+|||++.+ .++.++|+|||||++|||+||..||...........+......++.
T Consensus 149 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~--- 222 (323)
T cd05615 149 KEHMVDG---VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK--- 222 (323)
T ss_pred cccCCCC---ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---
Confidence 7543221 12334679999999997644 5788999999999999999999999877644333333222211111
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.++..+.+++.+||..+|.+|++.
T Consensus 223 ---------~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 223 ---------SLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---------cCCHHHHHHHHHHcccCHhhCCCC
Confidence 233457888999999999999985
No 146
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.1e-39 Score=312.07 Aligned_cols=246 Identities=22% Similarity=0.296 Sum_probs=188.5
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||++..+ +|+.||+|++........ .....+..|++++++++||||+++++++.+ ...|+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~----------~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~l 70 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKK----------SGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCL 70 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcc----------hhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEE
Confidence 799999999999976 489999999864322110 012335679999999999999999987766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||++|++|.+++.... ..++++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~g~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~ 147 (277)
T cd05607 71 VMSLMNGGDLKYHIYNVG-ERGLEMERVIHYSAQITCGILHLHS--MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKD 147 (277)
T ss_pred EEecCCCCCHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHH--CCEEEccCChHhEEEcCCCCEEEeeceeeeecCC
Confidence 999999999999886543 3458999999999999999999999 8899999999999999999999999999876543
Q ss_pred CCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccC
Q psy5603 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
... .....||..|+|||++. +.++.++|+|||||++|||++|..||............... ...... .
T Consensus 148 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~------~~~~~~-~ 216 (277)
T cd05607 148 GKT----ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRR------TLEDEV-K 216 (277)
T ss_pred Cce----eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHH------hhcccc-c
Confidence 221 22357899999999664 45788999999999999999999999764321111111000 000000 0
Q ss_pred CChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 415 WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+|+.+||..||++||++.|+++
T Consensus 217 ~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~ 249 (277)
T cd05607 217 FEHQNFTEESKDICRLFLAKKPEDRLGSREKND 249 (277)
T ss_pred cccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence 111234556889999999999999999977654
No 147
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.7e-38 Score=301.39 Aligned_cols=245 Identities=27% Similarity=0.429 Sum_probs=193.4
Q ss_pred ccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
.||+|+||.||+|..+++..||+|.++.... . .....|.+|++++++++||||+++++++.. ...++
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 69 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP------Q------ELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYI 69 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCC------H------HHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEE
Confidence 6899999999999988788999999864321 1 113458899999999999999999998877 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++++|.+++.... ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||+++....
T Consensus 70 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 145 (250)
T cd05085 70 VMELVPGGDFLSFLRKKK--DELKTKQLVKFALDAAAGMAYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDD 145 (250)
T ss_pred EEECCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecccChheEEEcCCCeEEECCCccceeccc
Confidence 999999999999987543 358999999999999999999999 8899999999999999999999999999875432
Q ss_pred CCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhcc
Q psy5603 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAG 413 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 413 (455)
... .......++..|+|||.+. +.++.++||||||+++|++++ |..||............... ...
T Consensus 146 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~--------- 213 (250)
T cd05085 146 GIY--SSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG-YRM--------- 213 (250)
T ss_pred ccc--ccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC-CCC---------
Confidence 211 1111224466799999664 467889999999999999999 99999876543222222111 000
Q ss_pred CCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 414 EWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..+..++..+.+++.+|+..+|++||++.++++.|.
T Consensus 214 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 214 -SCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred -CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 001123456888999999999999999999999875
No 148
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1e-38 Score=304.99 Aligned_cols=253 Identities=26% Similarity=0.418 Sum_probs=192.0
Q ss_pred CccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 176 NKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||+|.+.+ +..||+|.+..... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITD------------LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCC------------HHHHHHHHHHHHHHccCCCCCcceEEEEeecC
Confidence 368999999999998642 35799998743211 0114558899999999999999999997643
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+++||||||+|||+++++.+||+|||+
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlk~~nili~~~~~~kl~dfg~ 144 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLAS--KKFVHRDLAARNCMLDESFTVKVADFGL 144 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCccc
Confidence 56799999999999999997643 246788889999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcce-eeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 330 VKMSETSNMKT-MYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++......... .......++..|+|||.+ ...++.++|||||||++|||++ |.+||................ ..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~-~~-- 221 (262)
T cd05058 145 ARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGR-RL-- 221 (262)
T ss_pred cccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CC--
Confidence 87554322111 111234567789999965 4567889999999999999999 566776554322221111110 00
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhcC
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
..+..++..+.+++.+||..+|++||++.+|++.|++++.+
T Consensus 222 --------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~~ 262 (262)
T cd05058 222 --------LQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFST 262 (262)
T ss_pred --------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhcC
Confidence 00112334588899999999999999999999999998764
No 149
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=7.2e-39 Score=324.85 Aligned_cols=255 Identities=27% Similarity=0.413 Sum_probs=197.1
Q ss_pred CCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecc
Q psy5603 174 RGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLG 246 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~ 246 (455)
++++||+|+||.||+|++. .+..||||+++..... . ....+.+|+.++.++. ||||+++++
T Consensus 41 ~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-----~-------~~~~~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 41 LGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-----S-------EKQALMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred hhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-----h-------HHHHHHHHHHHHHhcCCCCCeEEEEE
Confidence 4488999999999999864 2468999999643210 0 1345889999999997 999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCC---------------------------------------------------
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNN--------------------------------------------------- 274 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------------------------------------------------- 274 (455)
++.. ...++|+||+++|+|.+++.....
T Consensus 109 ~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (401)
T cd05107 109 ACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESAD 188 (401)
T ss_pred EEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccC
Confidence 8877 788999999999999999975321
Q ss_pred --------------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCC
Q psy5603 275 --------------------------------------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 275 --------------------------------------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dik 310 (455)
...+++..+..++.|++.||.|||+ ++++|||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivHrdlk 266 (401)
T cd05107 189 YVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS--KNCVHRDLA 266 (401)
T ss_pred ccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc--CCcCcccCC
Confidence 1347888899999999999999999 889999999
Q ss_pred CCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCC
Q psy5603 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDN 388 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~ 388 (455)
|+|||+++++.+||+|||+++......... ......++..|+|||.+. +.++.++|||||||++|||++ |..||...
T Consensus 267 p~NiLl~~~~~~kL~DfGla~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~ 345 (401)
T cd05107 267 ARNVLICEGKLVKICDFGLARDIMRDSNYI-SKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPEL 345 (401)
T ss_pred cceEEEeCCCEEEEEecCcceecccccccc-cCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCC
Confidence 999999999999999999988643322111 112345788899999654 457889999999999999998 89999765
Q ss_pred cchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 389 NTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
................ ..+..++..+.+++.+|+..+|.+||++++|++.|++++
T Consensus 346 ~~~~~~~~~~~~~~~~----------~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 346 PMNEQFYNAIKRGYRM----------AKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred CchHHHHHHHHcCCCC----------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 4322211111111110 011224456889999999999999999999999999876
No 150
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.9e-39 Score=311.87 Aligned_cols=262 Identities=24% Similarity=0.356 Sum_probs=195.8
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC---------------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN---------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ 235 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~---------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 235 (455)
.|++.++||+|+||.||++...+ ...||+|+++.... . .....|.+|++++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~------~------~~~~~~~~ei~~l~~ 73 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVT------K------TARNDFLKEIKIMSR 73 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCC------H------HHHHHHHHHHHHHHh
Confidence 45677999999999999987642 23589999864321 0 113458899999999
Q ss_pred CCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCee
Q psy5603 236 CKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVN---------NTPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 236 l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ii 305 (455)
++|+|++++++++.. ...++||||+++++|.+++.... ....+++..++.++.+++.||+|||+ .+++
T Consensus 74 l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~--~~i~ 151 (295)
T cd05097 74 LKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS--LNFV 151 (295)
T ss_pred CCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh--cCee
Confidence 999999999998876 88899999999999999986532 12347899999999999999999999 8899
Q ss_pred ecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc--CC
Q psy5603 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT--GM 382 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt--G~ 382 (455)
||||||+||+++.++.+||+|||+++....... ........++..|+|||.+ .+.++.++|+|||||++|+|++ |.
T Consensus 152 H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~ 230 (295)
T cd05097 152 HRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKE 230 (295)
T ss_pred ccccChhhEEEcCCCcEEecccccccccccCcc-eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCC
Confidence 999999999999999999999999876543321 1112334567789999955 5578999999999999999998 67
Q ss_pred CCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.||............... ............+...+..+.+|+.+|+..+|++||++.+|++.|++
T Consensus 231 ~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 231 QPYSLLSDEQVIENTGEF----FRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred CCCcccChHHHHHHHHHh----hhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 788765432211111100 00000000000011234568899999999999999999999999864
No 151
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.4e-39 Score=311.82 Aligned_cols=256 Identities=28% Similarity=0.416 Sum_probs=198.4
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeec
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLL 245 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 245 (455)
++.+.||+|+||.||+|.... ...||+|.+..... . .....+.+|+.++.++ +|+||++++
T Consensus 15 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~i~~~~ 82 (293)
T cd05053 15 TLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDAT------E------KDLSDLVSEMEMMKMIGKHKNIINLL 82 (293)
T ss_pred EEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCC------H------HHHHHHHHHHHHHHhhcCCCCeeeEE
Confidence 344889999999999998742 36789999864311 0 0134588999999999 899999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhc-------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCC
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARV-------------NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKS 311 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp 311 (455)
+++.. +..+++|||+++|+|.+++... .....+++..++.++.|++.||.|||+ ++|+||||||
T Consensus 83 ~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~--~~ivH~dlkp 160 (293)
T cd05053 83 GVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS--KKCIHRDLAA 160 (293)
T ss_pred EEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCccccccce
Confidence 98777 7889999999999999999653 123568999999999999999999999 8899999999
Q ss_pred CcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCc
Q psy5603 312 ANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNN 389 (455)
Q Consensus 312 ~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~ 389 (455)
+||+++.++.+||+|||+++......... ......++..|+|||.+ ...++.++|||||||++|||++ |..||....
T Consensus 161 ~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 239 (293)
T cd05053 161 RNVLVTEDHVMKIADFGLARDIHHIDYYR-KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP 239 (293)
T ss_pred eeEEEcCCCeEEeCcccccccccccccee-ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC
Confidence 99999999999999999998654432111 11223456789999965 4467899999999999999998 999998665
Q ss_pred chhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 390 TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
............ .. ..+..++..+.+|+.+|+..+|++||++.++++.|++++.
T Consensus 240 ~~~~~~~~~~~~-~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~~ 293 (293)
T cd05053 240 VEELFKLLKEGY-RM----------EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRMLT 293 (293)
T ss_pred HHHHHHHHHcCC-cC----------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhhC
Confidence 333222221111 00 0011234457889999999999999999999999998863
No 152
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.2e-39 Score=314.04 Aligned_cols=257 Identities=27% Similarity=0.404 Sum_probs=197.5
Q ss_pred CcCCCccCcCCCeEEEEEEEcC--------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Ccccee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLL 242 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 242 (455)
|.+++.||+|+||.||++.+.. +..||+|.++.... .. ....+.+|+.++.++ +||||+
T Consensus 20 ~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~-----~~-------~~~~~~~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 20 LVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDAT-----EK-------DLSDLISEMEMMKMIGKHKNII 87 (307)
T ss_pred eEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCC-----hH-------HHHHHHHHHHHHHHhcCCCCEe
Confidence 3566899999999999997531 24699999864311 01 134588899999999 799999
Q ss_pred eecccccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecC
Q psy5603 243 RLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRD 308 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~D 308 (455)
++++++.. ...++||||+++|+|.+++..... ...+++.+++.++.|++.||+|||+ .|++|||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~d 165 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS--KKCIHRD 165 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCccccc
Confidence 99998877 788999999999999999976431 1358999999999999999999999 8899999
Q ss_pred CCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCC
Q psy5603 309 VKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPID 386 (455)
Q Consensus 309 ikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~ 386 (455)
|||+||++++++.+||+|||+++........ .......++..|+|||.+. +.++.++|+|||||++|||++ |..||.
T Consensus 166 lkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~ 244 (307)
T cd05098 166 LAARNVLVTEDNVMKIADFGLARDIHHIDYY-KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYP 244 (307)
T ss_pred ccHHheEEcCCCcEEECCCcccccccccchh-hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCC
Confidence 9999999999999999999998755432111 1112223457899999664 457889999999999999998 889997
Q ss_pred CCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 387 DNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
............... .. ..+..++..+.+++.+|+..+|++||++.+|++.|++++.
T Consensus 245 ~~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 245 GVPVEELFKLLKEGH-RM----------DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred cCCHHHHHHHHHcCC-CC----------CCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 655322222221110 00 0112334568889999999999999999999999998864
No 153
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1e-38 Score=306.70 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=187.8
Q ss_pred ccCcCCCeEEEEEEEcC---CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 177 KLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.||+|+||.||+|.+.+ +..+|+|.++.... . .....|.+|+.++++++||||+++++++.+ ..
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 69 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS------V------QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTP 69 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCC------h------HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCC
Confidence 58999999999998653 45789998864321 0 013458889999999999999999998877 77
Q ss_pred eEEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.++||||+++|+|.+++..... ...+++..+..++.|++.|+.|||+ .+++|+||||+||+++.++.+||+|||++
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dlkp~nil~~~~~~~kL~dfg~~ 147 (269)
T cd05087 70 YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK--NNFIHSDLALRNCLLTADLTVKIGDYGLS 147 (269)
T ss_pred cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCEeccccCcceEEEcCCCcEEECCcccc
Confidence 8999999999999999975332 2356778888999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC--------CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHH-hhhc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL-VVEQ 400 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~-~~~~ 400 (455)
+....... ........|+..|+|||++.+ .++.++|+||||+++|||++ |..||........... ....
T Consensus 148 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 226 (269)
T cd05087 148 HNKYKEDY-YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ 226 (269)
T ss_pred ccccCcce-eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc
Confidence 75433221 111234567889999997643 24779999999999999996 9999976553222111 1111
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
... ..++.. ....+..+.+++.+|+ .+|++||++.+|+..|+
T Consensus 227 ~~~---~~~~~~----~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 227 QLK---LPKPRL----KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cCC---CCCCcc----CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 111111 1122344777888787 68999999999998874
No 154
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.4e-39 Score=305.94 Aligned_cols=255 Identities=26% Similarity=0.406 Sum_probs=198.9
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
|++++.||+|+||.||+|...+++.+|||.++....... ........+.+|++++++++|+||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~-------~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 74 (265)
T cd06631 2 WTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVL-------AAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDD 74 (265)
T ss_pred ccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchh-------hHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecC
Confidence 456789999999999999987789999999875432111 011124568899999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||+++++|.+++.+. .++++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 149 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHN--NCVVHRDIKGNNVMLMPNGIIKLIDFGCA 149 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHhEEECCCCeEEeccchhh
Confidence 7889999999999999999763 358999999999999999999999 78999999999999999999999999998
Q ss_pred cccccCCc---ceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 331 KMSETSNM---KTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~---~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
........ .........|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...+.......+.......+.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (265)
T cd06631 150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR 229 (265)
T ss_pred HhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC
Confidence 76532211 1112234578999999997654 5688999999999999999999999865533222222111111111
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+..++..+.++|.+||..+|.+||++.++++
T Consensus 230 ---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 230 ---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11224455788999999999999999999874
No 155
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.7e-39 Score=324.56 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=192.2
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||++.++ +++.||+|++....... ......+.+|+.+++.++||||+++++.+.+
T Consensus 46 ~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~----------~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 46 EVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIK----------RSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred EEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhh----------hHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 44589999999999999987 47899999986432110 1113447889999999999999999998776
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||++||+|.+++.. ..++...+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~--~~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS--MGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 788999999999999999865 248899999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+....... .......||+.|+|||++.+ .++.++|||||||++|||++|..||...+.......+......+.
T Consensus 190 ~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~ 267 (371)
T cd05622 190 MKMNKEGM--VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT 267 (371)
T ss_pred eEcCcCCc--ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence 86543221 11235679999999997643 267899999999999999999999987764433333322111110
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCC--CCCHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
+ .....++..+.++|.+|+..++.+ ||++.++++
T Consensus 268 -~-------~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~ 303 (371)
T cd05622 268 -F-------PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 303 (371)
T ss_pred -C-------CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhc
Confidence 0 011234566888899999744433 788888876
No 156
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-38 Score=304.20 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=202.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|... +|+.||+|.++........ ....+.+|++++++++|+|++++++++.+
T Consensus 4 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~----------~~~~~~~ei~~l~~~~~~~i~~~~~~~~~ 73 (267)
T cd08224 4 FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAK----------ARQDCLKEIDLLKQLDHPNVIKYLASFIE 73 (267)
T ss_pred eeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchh----------hHHHHHHHHHHHHhCCCCCeeeeeeeeec
Confidence 345589999999999999987 6899999998643221110 13458899999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++||||+++|+|.+++.... ....+++.+++.++.+++.||.|||+ .|++||||||+||+++.++.++|+|||
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 74 NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS--KRIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecCCcChhhEEECCCCcEEEeccc
Confidence 78899999999999999986532 24568999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++....... ......|+..|+|||.+. ..++.++|+|||||++|+|++|..||.................
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~----- 223 (267)
T cd08224 152 LGRFFSSKTT---AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC----- 223 (267)
T ss_pred eeeeccCCCc---ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC-----
Confidence 9876543221 123356889999999654 4578899999999999999999999976542211111100000
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.....+....+..+.++|.+||..+|++||++.+|++.|+++.
T Consensus 224 ---~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 224 ---DYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ---CCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0011112245566889999999999999999999999998864
No 157
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.1e-38 Score=308.15 Aligned_cols=256 Identities=25% Similarity=0.397 Sum_probs=200.4
Q ss_pred cCCCccCcCCCeEEEEEEEcC-----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.+.||+|+||.||+|.+.+ +..||+|++..... ......+.+|+.++++++||||++++++
T Consensus 9 ~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~------------~~~~~~~~~e~~~l~~l~h~ni~~~~~~ 76 (280)
T cd05043 9 TLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHAS------------EIQVTLLLQESCLLYGLSHQNILPILHV 76 (280)
T ss_pred EEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCC------------HHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 455899999999999999865 67899998753211 1114558899999999999999999997
Q ss_pred ccC--ceeEEEEEeccCCCHHHHHhhcCCC-----CCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 248 CNN--IMNCIVYEYMCNGSLYDRLARVNNT-----PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 248 ~~~--~~~~lV~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+.. ...+++++|+++++|.+++...... ..+++.+++.++.|++.||.|||+ .+++||||||+||++++++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~--~~i~H~di~p~nil~~~~~ 154 (280)
T cd05043 77 CIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK--RGVIHKDIAARNCVIDEEL 154 (280)
T ss_pred EecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccCHhhEEEcCCC
Confidence 655 6778999999999999998764322 568999999999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||+++........ .......++..|+|||.+. ..++.++||||||+++||+++ |..||...+.........
T Consensus 155 ~~kl~d~g~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~ 233 (280)
T cd05043 155 QVKITDNALSRDLFPMDYH-CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK 233 (280)
T ss_pred cEEECCCCCcccccCCceE-EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHH
Confidence 9999999998755332211 1122345677899999664 457889999999999999999 999998765433222221
Q ss_pred hcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 399 EQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 399 ~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
. ...+. ....++..+.+++.+|+..+|++||++.+|++.|+++.+
T Consensus 234 ~-~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 234 D-GYRLA----------QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred c-CCCCC----------CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1 11110 011234457889999999999999999999999998864
No 158
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=1.3e-38 Score=311.69 Aligned_cols=255 Identities=28% Similarity=0.446 Sum_probs=197.7
Q ss_pred cCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeec
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLL 245 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~ 245 (455)
++.+.||+|+||.||+|.+. .+..||||.++.... . .....+.+|+.+++++ +||||++++
T Consensus 38 ~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~iv~~~ 105 (302)
T cd05055 38 SFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH------S------SEREALMSELKIMSHLGNHENIVNLL 105 (302)
T ss_pred EEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC------h------HHHHHHHHHHHHHHhccCCCCcceEE
Confidence 34589999999999999752 245799999864321 0 0134588999999999 799999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
+++.. +..++||||+++|+|.+++.... ...+++.++..++.+++.||.|||+ ++++|+||||+|||++.++.+||
T Consensus 106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~--~~ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 106 GACTIGGPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLAS--KNCIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred EEEecCCceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeehhhhccceEEEcCCCeEEE
Confidence 98876 78899999999999999997633 2348999999999999999999999 88999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhccc
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+|||+++....... ........++..|+|||.+ .+.++.++|||||||++|||+| |..||.................
T Consensus 183 ~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~ 261 (302)
T cd05055 183 CDFGLARDIMNDSN-YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGY 261 (302)
T ss_pred CCCcccccccCCCc-eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCC
Confidence 99999876543321 1122334567889999965 4567889999999999999998 9999976553222111111110
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.. ..+...+..+.+++.+|+..+|++||++.+|++.|++++
T Consensus 262 ~~----------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 262 RM----------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred cC----------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 00 011123445888999999999999999999999998864
No 159
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.3e-38 Score=309.38 Aligned_cols=256 Identities=24% Similarity=0.427 Sum_probs=196.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
|++.++||+|+||.||+|..++ +..||+|.++.... . .....+.+|+.++++++||||++++
T Consensus 8 ~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~------~------~~~~~~~~e~~~l~~l~~~~i~~~~ 75 (288)
T cd05061 8 ITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS------L------RERIEFLNEASVMKGFTCHHVVRLL 75 (288)
T ss_pred ceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC------H------HHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 3455899999999999997542 45799998753221 0 0123478899999999999999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD 317 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~ 317 (455)
+++.+ ...|+||||+++|+|.+++..... .+.+++..+..++.|++.||.|||+ ++++||||||+||+++
T Consensus 76 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dikp~nili~ 153 (288)
T cd05061 76 GVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA--KKFVHRDLAARNCMVA 153 (288)
T ss_pred EEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCCcCCCCChheEEEc
Confidence 98766 778999999999999999975321 3456788899999999999999999 8899999999999999
Q ss_pred CCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHH
Q psy5603 318 ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 318 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
.++.+||+|||+++......... ......++..|+|||.+ .+.++.++|+|||||++|||++ |..||..........
T Consensus 154 ~~~~~~L~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~ 232 (288)
T cd05061 154 HDFTVKIGDFGMTRDIYETDYYR-KGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLK 232 (288)
T ss_pred CCCcEEECcCCcccccccccccc-ccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999999999988654322111 11223457789999965 4567899999999999999999 888997655332222
Q ss_pred HhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
....... .. .+...+..+.+++.+|+..+|++||++.++++.|++.+
T Consensus 233 ~~~~~~~--~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 233 FVMDGGY--LD---------QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHcCCC--CC---------CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 1111100 00 01123456889999999999999999999999998754
No 160
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-38 Score=303.91 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=198.1
Q ss_pred CccCcCCCeEEEEEEEcC--C--cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 176 NKLGEGQFGTVYYGKLKN--G--MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--~--~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
+.||+|+||.||+|.+.+ + ..||||.+...... .....|.+|++++++++||||+++++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 68 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS------------DIMDDFLKEAAIMHSLDHENLIRLYGVVLTH 68 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH------------HHHHHHHHHHHHHhhcCCCCccceeEEEcCC
Confidence 368999999999998753 2 36899998654321 1245689999999999999999999987777
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++|+||+++++|.+++..... ..+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||+++
T Consensus 69 ~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~di~p~nil~~~~~~~kl~dfg~~~ 145 (257)
T cd05040 69 PLMMVTELAPLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLES--KRFIHRDLAARNILLASDDKVKIGDFGLMR 145 (257)
T ss_pred eEEEEEEecCCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHh--CCccccccCcccEEEecCCEEEeccccccc
Confidence 88999999999999999987442 468999999999999999999999 889999999999999999999999999988
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
................++..|+|||.+. ..++.++|||||||++|||++ |..||...+...............
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----- 220 (257)
T cd05040 146 ALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL----- 220 (257)
T ss_pred cccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC-----
Confidence 7654322111223456788999999764 467889999999999999999 999997665433322222111000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..+...+..+.+++.+|+..+|++||++.++++.|.+
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 221 -----ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred -----CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 0011234568889999999999999999999998853
No 161
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=9e-39 Score=314.30 Aligned_cols=197 Identities=25% Similarity=0.367 Sum_probs=158.6
Q ss_pred CCccCcCCCeEEEEEEEcC---CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 175 GNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.+||+|+||.||+|..++ +..||+|.+..... ...+.+|+.++++++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~---------------~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 70 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI---------------SMSACREIALLRELKHPNVIALQKVFLSH 70 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC---------------cHHHHHHHHHHHhCCCCCeeeEEEEEecc
Confidence 4789999999999999753 57899999864321 2237789999999999999999997632
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcC------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE----cC
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVN------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL----DE 318 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl----~~ 318 (455)
...|+|+||+. ++|.+++.... ....+++..+..++.|++.||.|||+ ++|+||||||+|||+ +.
T Consensus 71 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~--~~ivH~Dlkp~Nil~~~~~~~ 147 (317)
T cd07867 71 SDRKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA--NWVLHRDLKPANILVMGEGPE 147 (317)
T ss_pred CCCeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh--CCEEcCCCCHHHEEEccCCCC
Confidence 56789999985 68888775321 12358899999999999999999999 889999999999999 56
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCc
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~ 389 (455)
++.+||+|||+++................||+.|+|||.+.+ .++.++|||||||++|||+||.+||....
T Consensus 148 ~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~ 220 (317)
T cd07867 148 RGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred CCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccccc
Confidence 789999999999876543222222334678999999997654 46889999999999999999999997543
No 162
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=9.6e-39 Score=307.74 Aligned_cols=253 Identities=25% Similarity=0.397 Sum_probs=197.1
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.+.||+|+||.||+|.++. +..||+|.+..... . .....+.+|+.+++.++||||+++++
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~------~------~~~~~~~~e~~~l~~~~~~~i~~~~~ 76 (277)
T cd05032 9 TLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENAS------M------RERIEFLNEASVMKEFNCHHVVRLLG 76 (277)
T ss_pred eEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccC------H------HHHHHHHHHHHHHHhCCCCceeEEEE
Confidence 455889999999999998752 36799999853211 0 11345889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCC-------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNN-------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
++.+ ...++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+ .+++||||||+||+++.
T Consensus 77 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~di~p~nill~~ 154 (277)
T cd05032 77 VVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA--KKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CCccccccChheEEEcC
Confidence 8776 788999999999999999975332 2347899999999999999999999 88999999999999999
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHH
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
++.+||+|||+++........ .......++..|+|||.+ .+.++.++|||||||++||++| |..||...+.......
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 233 (277)
T cd05032 155 DLTVKIGDFGMTRDIYETDYY-RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKF 233 (277)
T ss_pred CCCEEECCcccchhhccCccc-ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHH
Confidence 999999999998765433211 112334577889999965 4567889999999999999998 9999976654332222
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..... ... .+..++..+.+++.+||..+|++||++.++++.|++
T Consensus 234 ~~~~~--~~~---------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 234 VIDGG--HLD---------LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred HhcCC--CCC---------CCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 21110 000 011234568889999999999999999999999864
No 163
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.2e-38 Score=304.45 Aligned_cols=253 Identities=26% Similarity=0.389 Sum_probs=199.3
Q ss_pred cCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.+.+.||+|+||.||+|.+.+ ...||||....... . .....|.+|+.+++++.||||+++++++
T Consensus 9 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~------~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 76 (270)
T cd05056 9 TLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS------P------SVREKFLQEAYIMRQFDHPHIVKLIGVI 76 (270)
T ss_pred eeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC------H------HHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence 345889999999999998753 24689998864321 0 1134588999999999999999999999
Q ss_pred cCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 249 NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 249 ~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
.+...++||||+++|+|.+++.... ..+++.+++.++.+++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 77 TENPVWIVMELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLES--KRFVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred cCCCcEEEEEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccChheEEEecCCCeEEccCc
Confidence 8888899999999999999997632 358999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+++........ ......++..|+|||.+. ..++.++||||||+++||+++ |..||................ ...
T Consensus 153 ~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~-~~~- 228 (270)
T cd05056 153 LSRYLEDESYY--KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGE-RLP- 228 (270)
T ss_pred eeeecccccce--ecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC-cCC-
Confidence 98865443211 122334556899999664 457889999999999999996 999998765432222221111 110
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.+..++..+.+++.+|+..+|.+||++.++++.|+++.+
T Consensus 229 ---------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 229 ---------MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred ---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 112334568889999999999999999999999998865
No 164
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-38 Score=311.61 Aligned_cols=256 Identities=26% Similarity=0.408 Sum_probs=198.0
Q ss_pred cCCCccCcCCCeEEEEEEEc--------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceee
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK--------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.+++.||+|+||.||+|... ++..||+|.+..... ......+.+|+.+++.+ +||||++
T Consensus 18 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~------------~~~~~~~~~E~~~l~~l~~h~~i~~ 85 (304)
T cd05101 18 TLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDAT------------EKDLSDLVSEMEMMKMIGKHKNIIN 85 (304)
T ss_pred eecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccc------------hHHHHHHHHHHHHHHhhccCCCchh
Confidence 45588999999999999742 235799999853211 01134588999999999 8999999
Q ss_pred ecccccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCC
Q psy5603 244 LLGLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Di 309 (455)
+++++.. ...++||||+++|+|.+++..... ...+++.++..++.|++.||.|||+ +|++||||
T Consensus 86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~--~givH~dl 163 (304)
T cd05101 86 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS--QKCIHRDL 163 (304)
T ss_pred eeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH--CCeeeccc
Confidence 9998877 778999999999999999976421 2357889999999999999999999 88999999
Q ss_pred CCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCC
Q psy5603 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~ 387 (455)
||+||+++.++.+||+|||+++........ .......++..|+|||++. ..++.++||||||+++|||++ |..||..
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 242 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 242 (304)
T ss_pred ccceEEEcCCCcEEECCCccceeccccccc-ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 999999999999999999998865432211 1122345677899999664 457889999999999999998 8888876
Q ss_pred CcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 388 NNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.............. .. ..+..++..+.+++.+|+..+|++||++.+|++.|++++.
T Consensus 243 ~~~~~~~~~~~~~~-~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 243 IPVEELFKLLKEGH-RM----------DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred CCHHHHHHHHHcCC-cC----------CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 65333222221111 00 0112345568889999999999999999999999998763
No 165
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=3e-38 Score=305.07 Aligned_cols=254 Identities=26% Similarity=0.415 Sum_probs=199.1
Q ss_pred cCCCccCcCCCeEEEEEEEcC-Cc----EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
++.+.||+|+||.||+|.++. |. .||+|.+..... ......+.+|+.++++++||||++++++
T Consensus 10 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~ 77 (279)
T cd05057 10 EKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS------------PKANKEILDEAYVMASVDHPHVVRLLGI 77 (279)
T ss_pred EEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC------------HHHHHHHHHHHHHHHhCCCCCcceEEEE
Confidence 455899999999999998753 32 589998754321 1114558899999999999999999999
Q ss_pred ccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.....++|+||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~~v~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~--~~i~H~di~p~nil~~~~~~~kL~df 153 (279)
T cd05057 78 CLSSQVQLITQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEE--KRLVHRDLAARNVLVKTPQHVKITDF 153 (279)
T ss_pred EecCceEEEEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh--CCEEecccCcceEEEcCCCeEEECCC
Confidence 88888899999999999999997643 358999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++....... ........++..|+|||.+ .+.++.++|+||||+++||+++ |..||................ ..
T Consensus 154 g~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~- 230 (279)
T cd05057 154 GLAKLLDVDEK-EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGE-RL- 230 (279)
T ss_pred cccccccCccc-ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCC-CC-
Confidence 99986553321 1111223346689999966 4567889999999999999999 999998765433222222111 00
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+...+..+.+++.+||..+|+.||++.++++.|+++.+
T Consensus 231 ---------~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 231 ---------PQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0011122347788999999999999999999999998865
No 166
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.3e-39 Score=345.28 Aligned_cols=262 Identities=21% Similarity=0.258 Sum_probs=198.6
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.++||+|+||.||+|.+. +|+.||||+++...... ......|.+|++++++++||||+++++++.
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~----------e~~~~rflrEi~ILs~L~HPNIVkl~~v~~ 72 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSEN----------PLLKKRFLREAKIAADLIHPGIVPVYSICS 72 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccC----------HHHHHHHHHHHHHHHhCCCcCcCeEEEEEe
Confidence 3566799999999999999986 48899999986432110 112456899999999999999999999887
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNN--------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+ +..|+||||++||+|.+++..... ...+++..++.++.|++.||+|||+ +||+||||||+|||++.++
T Consensus 73 d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs--~GIIHRDLKPeNILLd~dg 150 (932)
T PRK13184 73 DGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS--KGVLHRDLKPDNILLGLFG 150 (932)
T ss_pred eCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH--CCccccCCchheEEEcCCC
Confidence 7 788999999999999999864211 2346678889999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcc---------------eeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCC
Q psy5603 321 VPKLGDFGIVKMSETSNMK---------------TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKP 384 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~---------------~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p 384 (455)
.+||+|||+++........ ........||+.|+|||.+. ..++.++|||||||++|||+||..|
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 9999999999865211100 01112357999999999664 4678899999999999999999999
Q ss_pred CCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC-CHHHHHHHHHhhh
Q psy5603 385 IDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-SMRDIVDLLSKSV 453 (455)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-s~~evl~~L~~~~ 453 (455)
|.............. .++. ...+...++..+.+++.+|+..||++|| ++.++.+.|+..+
T Consensus 231 F~~~~~~ki~~~~~i--------~~P~-~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~l 291 (932)
T PRK13184 231 YRRKKGRKISYRDVI--------LSPI-EVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHL 291 (932)
T ss_pred CCCcchhhhhhhhhc--------cChh-hccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 976442211111000 0000 0011123455688899999999999995 6777777777654
No 167
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.5e-38 Score=310.22 Aligned_cols=254 Identities=28% Similarity=0.404 Sum_probs=194.4
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-Cc--EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.+++ +. .+++|.++.... . .....|.+|++++.++ +||||++++++
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~------~------~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 71 (297)
T cd05089 4 IKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFAS------E------NDHRDFAGELEVLCKLGHHPNIINLLGA 71 (297)
T ss_pred ceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCC------H------HHHHHHHHHHHHHHhhcCCCchhheEEE
Confidence 3455899999999999998763 33 478888753211 0 0134588999999999 79999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCc
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 313 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~N 313 (455)
+.+ ...++|+||+++++|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+|
T Consensus 72 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dlkp~N 149 (297)
T cd05089 72 CENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE--KQFIHRDLAARN 149 (297)
T ss_pred EccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCcCCcce
Confidence 877 778999999999999999975321 1358899999999999999999999 889999999999
Q ss_pred EEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcch
Q psy5603 314 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTI 391 (455)
Q Consensus 314 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~ 391 (455)
||+++++.+||+|||++....... .......+..|+|||.+. ..++.++|||||||++|||++ |..||......
T Consensus 150 ill~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~ 225 (297)
T cd05089 150 VLVGENLASKIADFGLSRGEEVYV----KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA 225 (297)
T ss_pred EEECCCCeEEECCcCCCcccccee----ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 999999999999999986422110 111123345799999664 457889999999999999998 99999876543
Q ss_pred hhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 392 LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 392 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
......... .. ...+..++..+.+++.+|+..+|.+||++.++++.|++++.
T Consensus 226 ~~~~~~~~~-~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~ 277 (297)
T cd05089 226 ELYEKLPQG-YR----------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLE 277 (297)
T ss_pred HHHHHHhcC-CC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 322221111 00 00112244568889999999999999999999999988763
No 168
>KOG0594|consensus
Probab=100.00 E-value=1.3e-38 Score=301.63 Aligned_cols=256 Identities=24% Similarity=0.317 Sum_probs=195.5
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccc-eeeecccccC-c-
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN-LLRLLGLCNN-I- 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~-~- 251 (455)
++||+|+||+||+|+.+ +|+.||+|+++-...... .-....+|+.++++++|+| ||.+++++.+ .
T Consensus 17 eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-----------~P~taiREisllk~L~~~~~iv~L~dv~~~~~~ 85 (323)
T KOG0594|consen 17 EKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-----------VPSTAIREISLLKRLSHANHIVRLHDVIHTSNN 85 (323)
T ss_pred HHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC-----------CCchhhHHHHHHHHhCCCcceEEEEeeeeeccc
Confidence 67999999999999976 588999999986544211 0122578999999999999 9999998765 4
Q ss_pred -----eeEEEEEeccCCCHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 252 -----MNCIVYEYMCNGSLYDRLARVNNT-PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 252 -----~~~lV~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
..++|+||+ .-+|..++...... ..++...+..++.|+++||.|||+ ++|+||||||+|||++++|.+||+
T Consensus 86 ~~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~--~~IlHRDLKPQNlLi~~~G~lKla 162 (323)
T KOG0594|consen 86 HRGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHS--HGILHRDLKPQNLLISSSGVLKLA 162 (323)
T ss_pred ccccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCcceEEECCCCcEeee
Confidence 678999999 68999999875421 357778999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--c-
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--Q- 400 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~- 400 (455)
|||+|+....... ....-++|..|.|||++.| .+++.+|+||+||+++||+++++-|.+......-..+.. +
T Consensus 163 DFGlAra~~ip~~---~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGt 239 (323)
T KOG0594|consen 163 DFGLARAFSIPMR---TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGT 239 (323)
T ss_pred ccchHHHhcCCcc---cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCC
Confidence 9999996553321 1234578999999997655 488999999999999999999999998875333333222 1
Q ss_pred --ccchhhc---cch--hccCCC-hhHHH-------HHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 401 --EVPVREV---LDK--EAGEWN-ETHVE-------TLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 401 --~~~~~~~---~d~--~~~~~~-~~~~~-------~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+...+.. -+- ....|. +..+. ....+++.+|+..+|.+|.|++..++.
T Consensus 240 P~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 240 PNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 1111111 011 112222 11111 357789999999999999999998764
No 169
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=2.3e-38 Score=302.73 Aligned_cols=252 Identities=23% Similarity=0.391 Sum_probs=199.8
Q ss_pred CCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.+++.++||+|+||.||+|.++++..+|+|.+..... ....|.+|++++++++|+||+++++++.+
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM--------------SVEAFLAEANVMKTLQHDKLVKLHAVVTK 72 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCChh--------------HHHHHHHHHHHHHhcCCCCcceEEEEEcC
Confidence 4566799999999999999987778899998863211 13458899999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...+++|||+++++|.+++.... ...+++..++.++.+++.||.|||+ .+++|+||||+||+++.++.+||+|||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 73 EPIYIITEFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ--RNYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred CCeEEEEEeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHh--CCccccccCcceEEEcCCCcEEECCCcce
Confidence 77899999999999999997643 3468899999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
........ .......++..|+|||.+. +.++.++|+|||||++|+++| |..||...+........... ....
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~--- 223 (260)
T cd05073 150 RVIEDNEY--TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMP--- 223 (260)
T ss_pred eeccCCCc--ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC-CCCC---
Confidence 76543221 1122335667899999664 457889999999999999999 99999876533222222111 0100
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
.....+..+.+++.+|+..+|++||++.++.+.|+++
T Consensus 224 -------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 224 -------RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred -------CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 0112344588899999999999999999999999863
No 170
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.6e-39 Score=316.74 Aligned_cols=253 Identities=22% Similarity=0.279 Sum_probs=191.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++..+ +++.||||++...... .......|.+|+.++..++|+||+++++++.+
T Consensus 3 y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (331)
T cd05597 3 FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML----------KRAETACFREERDVLVNGDRRWITNLHYAFQD 72 (331)
T ss_pred ceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh----------hhhhHHHHHHHHHHHHhCCCCCCCceEEEEec
Confidence 456689999999999999976 4889999999642211 01124558889999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~Dfg~ 148 (331)
T cd05597 73 ENNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQ--LGYVHRDIKPDNVLLDKNGHIRLADFGS 148 (331)
T ss_pred CCeEEEEEecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeEECCCCHHHEEECCCCCEEEEECCc
Confidence 78899999999999999997632 358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+........ .......||+.|+|||++. +.++.++|||||||++|||++|..||...........+......
T Consensus 149 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (331)
T cd05597 149 CLRLLADGT--VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEH 226 (331)
T ss_pred eeecCCCCC--ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCc
Confidence 875443221 1122347999999999764 24678999999999999999999999876543332222211111
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccC--cCCCCCHHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFE--KDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~d--p~~RPs~~evl~ 447 (455)
.. +.. ....++..+++++.+|+..+ +..||++.++++
T Consensus 227 ~~--~~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 227 FQ--FPP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred cc--CCC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 00 000 01124455777888877554 334789988865
No 171
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.2e-39 Score=322.27 Aligned_cols=256 Identities=25% Similarity=0.347 Sum_probs=192.1
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|.+. +|+.||||++..... . ......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~-----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 71 (372)
T cd07853 3 EPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ------N-----LVSCKRVFRELKMLCFFKHDNVLSALDILQPP 71 (372)
T ss_pred cccceeeeCCCEEEEEEEECCCCCEEEEEecccccc------c-----hHHHHHHHHHHHHHHhCCCCCcCCHhheecCC
Confidence 34589999999999999975 589999999853211 0 1113458899999999999999999998765
Q ss_pred c-----eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 251 I-----MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 251 ~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
. ..|+|+||+. ++|.+.+.. ...+++..+..++.|++.||.|||+ ++++||||||+|||++.++.+||+
T Consensus 72 ~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~--~~ivH~dlkp~Nili~~~~~~kL~ 145 (372)
T cd07853 72 HIDPFEEIYVVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHS--AGILHRDIKPGNLLVNSNCVLKIC 145 (372)
T ss_pred CccccceEEEEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCChHHEEECCCCCEEec
Confidence 3 6799999995 688888765 3469999999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cc
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QE 401 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~ 401 (455)
|||+++........ ......+|+.|+|||.+.+ .++.++|||||||++|||++|+.||...+.......+.. +.
T Consensus 146 Dfg~a~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~ 223 (372)
T cd07853 146 DFGLARVEEPDESK--HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGT 223 (372)
T ss_pred cccceeecccCccc--cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99999865433211 1223468999999997654 368899999999999999999999987663322221111 11
Q ss_pred cchhh----------ccchhccCC--------ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 402 VPVRE----------VLDKEAGEW--------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~----------~~d~~~~~~--------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... .+....... .....+..+.+||.+|+..||++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 224 PSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred CCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 01000 000000000 00122456788999999999999999999975
No 172
>KOG0658|consensus
Probab=100.00 E-value=6.6e-40 Score=310.07 Aligned_cols=248 Identities=25% Similarity=0.368 Sum_probs=188.0
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC---c
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN---I 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---~ 251 (455)
+++|.|+||.||+|...+ +..||||++-.+... -.+|+++|+.+.|||||++.-++.. .
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~-----------------knrEl~im~~l~HpNIV~L~~~f~~~~~~ 92 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY-----------------KNRELQIMRKLDHPNIVRLLYFFSSSTES 92 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCCc-----------------CcHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence 889999999999999764 689999998654331 2369999999999999999876532 2
Q ss_pred ---eeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC-CceEEee
Q psy5603 252 ---MNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLGD 326 (455)
Q Consensus 252 ---~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~D 326 (455)
..++|||||+ .+|.+.++... .+..++.-.+.-+..||.+||.|||+ .||+||||||.|+|+|.+ |.+||||
T Consensus 93 d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~--~~IcHRDIKPqNlLvD~~tg~LKicD 169 (364)
T KOG0658|consen 93 DEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS--HGICHRDIKPQNLLVDPDTGVLKICD 169 (364)
T ss_pred chhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh--cCcccCCCChheEEEcCCCCeEEecc
Confidence 3468999995 78998887421 13467888888999999999999999 889999999999999976 9999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--ccc
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEV 402 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~ 402 (455)
||.|+....+.... ...-|.-|.|||.+.| .|+.+.||||.|||+.||+-|++-|.+.+.......+.. +..
T Consensus 170 FGSAK~L~~~epni----SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~P 245 (364)
T KOG0658|consen 170 FGSAKVLVKGEPNI----SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTP 245 (364)
T ss_pred CCcceeeccCCCce----eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCC
Confidence 99999877655322 2356888999996644 689999999999999999999999998763222221111 111
Q ss_pred chh----------hccchhc--cCC---ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVR----------EVLDKEA--GEW---NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~----------~~~d~~~--~~~---~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.-. +.-.+.. ..| .....+....+|+.+++..+|.+|.++.|++.
T Consensus 246 t~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 246 TREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred CHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 111 1111111 111 22344556778999999999999999998874
No 173
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.4e-38 Score=300.02 Aligned_cols=246 Identities=25% Similarity=0.353 Sum_probs=196.6
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.+.||+|+||.||+|..+ +++.||+|.+...... ......+.+|++++++++||||+++++++.+ .
T Consensus 4 ~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 72 (256)
T cd08529 4 ILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-----------RREREEAIDEARVLAKLDSSYIIRYYESFLDKG 72 (256)
T ss_pred EeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-----------HHHHHHHHHHHHHHHhcCCCCeehheeeeccCC
Confidence 4488999999999999986 4889999998643221 1114558899999999999999999998877 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||+++++|.+++.... ...+++..++.++.+++.||.|||+ .+++||||||+||+++.++.++|+|||+++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH~--~~i~h~dl~~~nili~~~~~~~l~df~~~~ 149 (256)
T cd08529 73 KLNIVMEYAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLHS--KKILHRDIKSLNLFLDAYDNVKIGDLGVAK 149 (256)
T ss_pred EEEEEEEeCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEEeCCCCEEEcccccce
Confidence 8899999999999999998642 3568999999999999999999999 889999999999999999999999999988
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccch
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
....... ......|+..|+|||++. +.++.++|+||||+++|+|++|..||................ ..
T Consensus 150 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~----- 219 (256)
T cd08529 150 LLSDNTN---FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV--FP----- 219 (256)
T ss_pred eccCccc---hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CC-----
Confidence 6543321 123457889999999664 457889999999999999999999998766332222211111 00
Q ss_pred hccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 411 EAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....++..+.+++.+|+..+|++||++.++++
T Consensus 220 ---~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 252 (256)
T cd08529 220 ---P-VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR 252 (256)
T ss_pred ---C-CccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence 0 11134456888999999999999999999975
No 174
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.7e-38 Score=309.12 Aligned_cols=260 Identities=27% Similarity=0.353 Sum_probs=198.5
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC-----------------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHH
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN-----------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
.|++.+.||+|+||.||+|.+.. +..||+|.+...... .....+.+|++++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~------------~~~~~~~~e~~~l 73 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD------------NAREDFLKEVKIL 73 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH------------HHHHHHHHHHHHH
Confidence 34667999999999999998642 245899998643221 1145688999999
Q ss_pred hhCCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy5603 234 SQCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNN--------TPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 234 ~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~i 304 (455)
++++||||+++++++.. ...++|+||+++++|.+++..... ...+++..++.++.|++.||.|||+ +++
T Consensus 74 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~--~~i 151 (296)
T cd05051 74 SRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES--LNF 151 (296)
T ss_pred HhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH--cCc
Confidence 99999999999998877 788999999999999999976431 2368999999999999999999999 889
Q ss_pred eecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc--C
Q psy5603 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT--G 381 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt--G 381 (455)
+||||||+||+++.++.++|+|||+++....... ........++..|+|||.+. +.++.++|||||||++|||++ |
T Consensus 152 ~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 230 (296)
T cd05051 152 VHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCR 230 (296)
T ss_pred cccccchhceeecCCCceEEccccceeecccCcc-eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCC
Confidence 9999999999999999999999999876543321 11223456778899999654 478999999999999999998 7
Q ss_pred CCCCCCCcchhhHHHhhhc--ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 382 MKPIDDNNTILYYYLVVEQ--EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 382 ~~p~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..||............... ........ ..+..++..+.+++.+||..+|++||++.+|++.|++
T Consensus 231 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 231 EQPYEHLTDQQVIENAGHFFRDDGRQIYL------PRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred CCCCCCcChHHHHHHHHhccccccccccC------CCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 7888765432222211110 00000000 0111234568889999999999999999999998864
No 175
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.1e-38 Score=304.75 Aligned_cols=252 Identities=26% Similarity=0.376 Sum_probs=193.2
Q ss_pred CCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+.+.||+|+||.||+|.+.+ +..||+|.+..... . .....|.+|+.++++++|+||++++++
T Consensus 10 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~------~------~~~~~~~~e~~~l~~l~~~~i~~~~~~ 77 (277)
T cd05036 10 LLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS------E------QDESDFLMEALIMSKFNHQNIVRLIGV 77 (277)
T ss_pred eeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC------H------HHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 44899999999999998853 46789998753221 1 113458899999999999999999997
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC--
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNN----TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-- 320 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~-- 320 (455)
+.+ ...++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+ ++++||||||+||+++.++
T Consensus 78 ~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 78 SFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE--NHFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred EccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccchheEEEeccCCC
Confidence 766 778999999999999999976432 2358999999999999999999999 8899999999999998765
Q ss_pred -ceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHh
Q psy5603 321 -VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLV 397 (455)
Q Consensus 321 -~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~ 397 (455)
.+||+|||+++........ .......++..|+|||.+ .+.++.++|||||||++|||++ |..||............
T Consensus 156 ~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~ 234 (277)
T cd05036 156 RVAKIADFGMARDIYRASYY-RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV 234 (277)
T ss_pred cceEeccCccccccCCccce-ecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 6999999998865332211 111223445679999965 4568999999999999999997 99999876533222222
Q ss_pred hhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.... .. ..+..++..+.+++.+|+..+|++||++.+|++.|++
T Consensus 235 ~~~~-~~----------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 235 TGGG-RL----------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred HcCC-cC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 1110 00 0012234567889999999999999999999998863
No 176
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.2e-39 Score=324.96 Aligned_cols=251 Identities=21% Similarity=0.294 Sum_probs=190.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||++..+ +++.||||+++...... ......+.+|+.++.+++||||+++++.+.+
T Consensus 3 f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~ 72 (360)
T cd05627 3 FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLE----------KEQVAHIRAERDILVEADGAWVVKMFYSFQD 72 (360)
T ss_pred ceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhh----------hhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 345589999999999999986 48899999997432111 1124558889999999999999999998777
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++... ..+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~--~givHrDLkp~NIli~~~~~vkL~DfG~ 147 (360)
T cd05627 73 KRNLYLIMEFLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQ--LGFIHRDIKPDNLLLDAKGHVKLSDFGL 147 (360)
T ss_pred CCEEEEEEeCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeEccCCCHHHEEECCCCCEEEeeccC
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcc--------------------------------eeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHH
Q psy5603 330 VKMSETSNMK--------------------------------TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILL 376 (455)
Q Consensus 330 a~~~~~~~~~--------------------------------~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ 376 (455)
++........ ........||+.|+|||++. ..++.++|||||||++|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvily 227 (360)
T cd05627 148 CTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227 (360)
T ss_pred CcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceee
Confidence 8744221100 00012357999999999764 46788999999999999
Q ss_pred HHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC---HHHHH
Q psy5603 377 ELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS---MRDIV 446 (455)
Q Consensus 377 elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl 446 (455)
||+||.+||...........+......+. +. +...++..+.+||.++| .+|++|++ +.+++
T Consensus 228 el~tG~~Pf~~~~~~~~~~~i~~~~~~~~--~p------~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~ 291 (360)
T cd05627 228 EMLIGYPPFCSETPQETYRKVMNWKETLV--FP------PEVPISEKAKDLILRFC-TDSENRIGSNGVEEIK 291 (360)
T ss_pred ecccCCCCCCCCCHHHHHHHHHcCCCcee--cC------CCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHh
Confidence 99999999987765443333322111100 00 00113445777888877 49999985 45554
No 177
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-38 Score=319.87 Aligned_cols=255 Identities=24% Similarity=0.318 Sum_probs=189.7
Q ss_pred CCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.+.||+|+||.||++.+. +|..||||++...... ......+.+|+.+++.++||||+++++++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 89 (359)
T cd07876 21 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQN-----------QTHAKRAYRELVLLKCVNHKNIISLLNVF 89 (359)
T ss_pred hceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccc-----------hhHHHHHHHHHHHHHhCCCCCEeeeeeee
Confidence 34566699999999999999976 4889999998643210 01134577899999999999999999976
Q ss_pred cC-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 249 NN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 249 ~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.. ...|+||||+. ++|.+.+.. .+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.
T Consensus 90 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~--~~ivHrDlkp~NIl~~~~~~ 161 (359)
T cd07876 90 TPQKSLEEFQDVYLVMELMD-ANLCQVIHM-----ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCT 161 (359)
T ss_pred ccCCCccccceeEEEEeCCC-cCHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCC
Confidence 43 24689999995 567666643 47889999999999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
+||+|||+++...... ......||+.|+|||.+.+ .++.++|||||||++|+|+||..||...+..........
T Consensus 162 ~kl~Dfg~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~ 237 (359)
T cd07876 162 LKILDFGLARTACTNF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQ 237 (359)
T ss_pred EEEecCCCccccccCc----cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 9999999987543321 1234578999999997654 678899999999999999999999987653221111110
Q ss_pred cccch-----------hhccchhc-----------cCC-------ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 QEVPV-----------REVLDKEA-----------GEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 ~~~~~-----------~~~~d~~~-----------~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+. ..+..... ..| .....+..+.+||.+|+..||++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 314 (359)
T cd07876 238 LGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314 (359)
T ss_pred cCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000 00000000 000 00112356789999999999999999999986
No 178
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.8e-39 Score=306.32 Aligned_cols=251 Identities=32% Similarity=0.463 Sum_probs=194.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++.||+|+||+||++.... ++.||+|++..... . ........+|+.++++++||||+++++++.+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~------~-----~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~ 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEI------E-----EEEREENIREIKILRRLRHPNIVQILDVFQD 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTH------H-----HHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccc------c-----ccccchhhhhhhccccccccccccccccccc
Confidence 4567899999999999999875 67899999975432 1 1112223459999999999999999998866
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+.+++|.+++.. ...+++..++.++.|++.||.+||+ .+++|+||||+||+++.++.++|+|||.
T Consensus 70 ~~~~~~v~~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh~--~~i~H~dikp~NIl~~~~~~~~l~Dfg~ 144 (260)
T PF00069_consen 70 DNYLYIVMEYCPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLHS--KGIVHRDIKPENILLDENGEVKLIDFGS 144 (260)
T ss_dssp SSEEEEEEEEETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHHH--TTEEESSBSGGGEEESTTSEEEESSGTT
T ss_pred cccccccccccccccccccccc---ccccccccccccccccccccccccc--cccccccccccccccccccccccccccc
Confidence 888999999999999999984 3468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchhh
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~ 406 (455)
+...... ........+|..|+|||+.. ...+.++|+||+|+++|+|++|..||.............. .......
T Consensus 145 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PF00069_consen 145 SVKLSEN---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS 221 (260)
T ss_dssp TEESTST---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred ccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 8754111 11234568899999999765 5678999999999999999999999998732111111111 1101100
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. .........+.++|.+||..+|++||++.++++
T Consensus 222 ~~------~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 222 SS------QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HT------TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cc------cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00 001111256888999999999999999999875
No 179
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.1e-38 Score=302.80 Aligned_cols=251 Identities=29% Similarity=0.432 Sum_probs=191.3
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.++.||+|+||.||+|... ++..||+|++......... ......+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 76 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPET--------SKEVSALECEIQLLKNLQHERIVQYYGCLRDR 76 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchh--------HHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC
Confidence 44589999999999999976 4889999998654321110 1124558899999999999999999997643
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++++||+++++|.+++... ..+++...+.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~l~~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~LH~--~~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 77 AEKTLTIFMEYMPGGSVKDQLKAY---GALTESVTRKYTRQILEGMSYLHS--NMIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred CCCEEEEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCEEEccCC
Confidence 5678999999999999999763 358999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++................|+..|+|||.+.+ .++.++|+|||||++|||++|..||................ .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~-~---- 226 (266)
T cd06651 152 ASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQP-T---- 226 (266)
T ss_pred CccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCC-C----
Confidence 98754322111111233568899999997654 57889999999999999999999998654322211111110 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+ ..+..+...+++++ +||..+|++||++++|++
T Consensus 227 -~~----~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 227 -NP----QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -CC----CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 00 01123445577788 577789999999999975
No 180
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=4.2e-38 Score=299.47 Aligned_cols=249 Identities=30% Similarity=0.468 Sum_probs=199.2
Q ss_pred CccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 176 NKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.||+|+||.||+|.... +..||+|.++...... ....+.+|++.+..++|+||+++++++.+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~------------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE------------ERKDFLKEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh------------HHHHHHHHHHHHhhcCCCChheeeeeecCC
Confidence 369999999999999863 6789999986543211 14568899999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCC------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNN------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
...++||||+++++|.+++..... ...+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~--~~i~H~di~p~nili~~~~~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS--KKFVHRDLAARNCLVGEDLVVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc--CCcccCccCcceEEECCCCcEEE
Confidence 788999999999999999987521 2579999999999999999999999 88999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhccc
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+|||.++....... ........++..|+|||.+. ..++.++||||||+++|||++ |..||................
T Consensus 147 ~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~- 224 (262)
T cd00192 147 SDFGLSRDVYDDDY-YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY- 224 (262)
T ss_pred cccccccccccccc-cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-
Confidence 99999987654331 11233456788999999664 467889999999999999999 699998775333222221100
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
. ...+..++..+.+++.+|+..+|++||++.++++.|+
T Consensus 225 ~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 R----------LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred C----------CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 0011223556888999999999999999999998874
No 181
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4e-38 Score=301.77 Aligned_cols=256 Identities=27% Similarity=0.413 Sum_probs=197.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.++..||+|+||.||+|.+. +++.||+|.+.......... .........+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSK----DRKRSMLDALAREIALLKELQHENIVQYLGSSLD 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchh----HHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe
Confidence 456689999999999999875 47899999986543321111 1111224568899999999999999999998777
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++... .++++..+..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+
T Consensus 78 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~--~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 78 ADHLNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHN--RGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred CCccEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHh--cCcccccCCHHHEEEcCCCCEEecccCC
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcce---eeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 330 VKMSETSNMKT---MYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~---~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
++......... .......|+..|+|||.+. +.++.++|+|||||++|+|++|..||...............
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----- 227 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGEN----- 227 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhcc-----
Confidence 88665321111 1112356889999999664 46788999999999999999999999875432221111110
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ ..+..++..+.++|.+||..+|++||++.++++
T Consensus 228 --~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 --ASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred --CCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 000 011234456888999999999999999999875
No 182
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-38 Score=303.90 Aligned_cols=244 Identities=29% Similarity=0.447 Sum_probs=195.2
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
|++.+.||+|+||.||+|... ++.||+|.++.... ...+.+|+.++++++|||++++++++...
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~-~~~~~iK~~~~~~~---------------~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (254)
T cd05083 8 LTLGEIIGEGEFGAVLQGEYT-GQKVAVKNIKCDVT---------------AQAFLEETAVMTKLHHKNLVRLLGVILHN 71 (254)
T ss_pred ceeeeeeccCCCCceEecccC-CCceEEEeecCcch---------------HHHHHHHHHHHHhCCCCCcCeEEEEEcCC
Confidence 345689999999999999864 78899999853211 34588999999999999999999988887
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++++|.+++.... ...+++..++.++.|++.||.|||+ .|++||||||+||+++.++.+||+|||+++
T Consensus 72 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~--~~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 72 GLYIVMELMSKGNLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLES--KKLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred CcEEEEECCCCCCHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccccCcceEEEcCCCcEEECCCccce
Confidence 7899999999999999997643 3458999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...... .....+..|+|||.+. +.++.++|+|||||++|||++ |.+||............... ..
T Consensus 149 ~~~~~~------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~------ 215 (254)
T cd05083 149 VGSMGV------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG-YR------ 215 (254)
T ss_pred eccccC------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC-CC------
Confidence 543211 1224456799999664 567889999999999999998 99999876543322222111 00
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......++..+.+++.+||..+|++||+++++++.|++
T Consensus 216 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 216 ----MEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred ----CCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 00112344567889999999999999999999998864
No 183
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.3e-38 Score=315.82 Aligned_cols=253 Identities=21% Similarity=0.263 Sum_probs=193.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++..+. ++.||+|++.+... ........+..|+.++..++|+||+++++++.+
T Consensus 3 y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 72 (332)
T cd05623 3 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM----------LKRAETACFREERDVLVNGDNQWITTLHYAFQD 72 (332)
T ss_pred ceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH----------HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec
Confidence 4556899999999999999874 67899999864211 011113457889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~--~~iiHrDlkp~Nili~~~~~~kL~DfG~ 148 (332)
T cd05623 73 ENNLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQ--LHYVHRDIKPDNILMDMNGHIRLADFGS 148 (332)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeEecCCCHHHEEECCCCCEEEeecch
Confidence 78899999999999999997643 368999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+....... ........||+.|+|||++. +.++.++|||||||++|||++|..||...........+......
T Consensus 149 a~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (332)
T cd05623 149 CLKLMEDG--TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 226 (332)
T ss_pred heecccCC--cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc
Confidence 87543222 11233457999999999764 34688999999999999999999999876644433333221111
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcC--CCCCHHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKD--KRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~--~RPs~~evl~ 447 (455)
.. + ......++..+.+|+.+|+..+++ .|+++.++++
T Consensus 227 ~~--~-----p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~ 265 (332)
T cd05623 227 FQ--F-----PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQ 265 (332)
T ss_pred cc--C-----CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhC
Confidence 10 0 001123455678888888866544 3688888865
No 184
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.8e-38 Score=306.44 Aligned_cols=257 Identities=22% Similarity=0.289 Sum_probs=188.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC---Cccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||+|.++ +++.||+|.++........ ...+.+|+++++++ +||||++++++
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~-----------~~~~~~e~~~l~~l~~~~h~ni~~~~~~ 70 (288)
T cd07863 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL-----------PLSTVREVALLKRLEAFDHPNIVRLMDV 70 (288)
T ss_pred ceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC-----------chHHHHHHHHHHHhhhcCCCCeeeeeee
Confidence 456689999999999999987 4889999998754321110 12255677766655 79999999997
Q ss_pred ccC------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 248 CNN------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 248 ~~~------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+.. ...++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+ ++++||||||+|||++.++.
T Consensus 71 ~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~--~~ivH~dikp~Nili~~~~~ 146 (288)
T cd07863 71 CATSRTDRETKVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHA--NCIVHRDLKPENILVTSGGQ 146 (288)
T ss_pred eccccCCCCceEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCC
Confidence 643 34689999996 58988887643 2458999999999999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
+||+|||+++...... ......||..|+|||++ ...++.++|||||||++|||++|.+||...........+..
T Consensus 147 ~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~ 222 (288)
T cd07863 147 VKLADFGLARIYSCQM----ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDL 222 (288)
T ss_pred EEECccCccccccCcc----cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHH
Confidence 9999999988654322 12345789999999966 44678999999999999999999999976653221111111
Q ss_pred -cc---cchhh-------ccchhccCC---ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 -QE---VPVRE-------VLDKEAGEW---NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~---~~~~~-------~~d~~~~~~---~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...+. ...+..... ....++..+.++|.+||..||++||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 223 IGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred hCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00 00000 000000000 00134556889999999999999999999874
No 185
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.8e-38 Score=303.01 Aligned_cols=248 Identities=27% Similarity=0.449 Sum_probs=190.5
Q ss_pred ccCcCCCeEEEEEEEcC-Cc--EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-c
Q psy5603 177 KLGEGQFGTVYYGKLKN-GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-I 251 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~-~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~ 251 (455)
.||+|+||.||+|.+++ +. .+|+|.++.... . .....+.+|++++.++ +||||+++++++.. +
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 69 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------K------DDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 69 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCC------H------HHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC
Confidence 58999999999999864 33 468888753211 0 1134588999999999 89999999998877 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcC-------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVN-------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
..++||||+++|+|.+++.... ....+++.++..++.|++.||+|||+ .+++||||||+||++++
T Consensus 70 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nili~~ 147 (270)
T cd05047 70 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNILVGE 147 (270)
T ss_pred CceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccccceEEEcC
Confidence 7899999999999999997532 12358899999999999999999999 88999999999999999
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHH
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
++.+||+|||+++...... .......+..|+|||.+. ..++.++|+|||||++|||++ |..||...........
T Consensus 148 ~~~~kl~dfgl~~~~~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~ 223 (270)
T cd05047 148 NYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK 223 (270)
T ss_pred CCeEEECCCCCccccchhh----hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHH
Confidence 9999999999976322110 111223456799999664 457889999999999999997 9999976543222221
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.... ... + .+..++..+.+++.+|+..+|.+||++.+++..|++++
T Consensus 224 ~~~~-~~~----~------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 224 LPQG-YRL----E------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred HhCC-CCC----C------CCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 1110 000 0 01123345788999999999999999999999999886
No 186
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.6e-38 Score=300.30 Aligned_cols=251 Identities=28% Similarity=0.422 Sum_probs=198.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++.+.||+|+||.||+|.++++..||||.+..... ....+.+|+.++++++|+||+++++++.+
T Consensus 8 ~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 73 (261)
T cd05034 8 LKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM--------------SPEAFLQEAQIMKKLRHDKLVQLYAVCSEE 73 (261)
T ss_pred eeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc--------------CHHHHHHHHHHHhhCCCCCEeeeeeeeecC
Confidence 345689999999999999988778899999864321 13458899999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.... ...+++..+..++.+++.|+.|||+ ++++|+||||+||+++.++.+||+|||++
T Consensus 74 ~~~~~v~e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~--~~i~h~di~p~nili~~~~~~~l~d~g~~ 150 (261)
T cd05034 74 EPIYIVTEYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLES--RNYIHRDLAARNILVGENLVCKIADFGLA 150 (261)
T ss_pred CceEEEEeccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcchheEEEcCCCCEEECccccc
Confidence 78899999999999999997643 3468999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......++..|+|||.+. +.++.++|+||||+++|+++| |+.||.+............. ...
T Consensus 151 ~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~---- 223 (261)
T cd05034 151 RLIEDDEYT--AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERG-YRM---- 223 (261)
T ss_pred eeccchhhh--hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC----
Confidence 765432111 112234567899999664 467889999999999999999 99999766533222222111 000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+...+..+.+++.+|+..+|.+||+++++.+.|+++
T Consensus 224 ------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~ 261 (261)
T cd05034 224 ------PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY 261 (261)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence 00112244588899999999999999999999999863
No 187
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=5.3e-39 Score=318.34 Aligned_cols=241 Identities=23% Similarity=0.286 Sum_probs=186.7
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC---CccceeeecccccC-ce
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~-~~ 252 (455)
||+|+||+||+|.++ +++.||||++....... ......+..|..++.++ .||||+++++.+.+ ..
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~----------~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~ 70 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA----------KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSD 70 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh----------hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCe
Confidence 799999999999986 48899999986432110 01133455677777665 69999999997766 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 71 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~qil~al~~LH~--~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~ 145 (330)
T cd05586 71 LYLVTDYMSGGELFWHLQK---EGRFSEDRAKFYIAELVLALEHLHK--YDIVYRDLKPENILLDATGHIALCDFGLSKA 145 (330)
T ss_pred EEEEEcCCCCChHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCeEeccCCHHHeEECCCCCEEEecCCcCcC
Confidence 8999999999999999876 3458999999999999999999999 8899999999999999999999999999875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccch
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
..... .......||+.|+|||++.+ .++.++|||||||++|||+||..||...........+......++
T Consensus 146 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----- 217 (330)
T cd05586 146 NLTDN---KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP----- 217 (330)
T ss_pred CCCCC---CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC-----
Confidence 43221 11235679999999997644 368899999999999999999999987664433333322221111
Q ss_pred hccCCChhHHHHHHHHHHHhhhccCcCCCCC----HHHHHH
Q psy5603 411 EAGEWNETHVETLISIVFEKCCVFEKDKRAS----MRDIVD 447 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs----~~evl~ 447 (455)
...++..+.++|.+||..+|++||+ +.++++
T Consensus 218 ------~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 ------KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred ------CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 1123455788999999999999984 555543
No 188
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.2e-38 Score=305.30 Aligned_cols=252 Identities=25% Similarity=0.422 Sum_probs=195.0
Q ss_pred cCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
....+||+|+||.||++... ++..+|+|.+..... . ....|.+|++++++++|+||+++++
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~~~~~ 74 (280)
T cd05092 8 VLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASE------S-------ARQDFQREAELLTVLQHQHIVRFYG 74 (280)
T ss_pred eeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCH------H-------HHHHHHHHHHHHhcCCCCCCceEEE
Confidence 34588999999999999742 256789998753211 1 1346899999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCC------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCc
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNN------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSAN 313 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~N 313 (455)
++.+ ...++|+||+++++|.+++..... ...+++..++.++.|++.||+|||+ .+++||||||+|
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~~i~H~dlkp~n 152 (280)
T cd05092 75 VCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS--LHFVHRDLATRN 152 (280)
T ss_pred EEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH--CCeecccccHhh
Confidence 8877 778999999999999999976431 1358999999999999999999999 889999999999
Q ss_pred EEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcch
Q psy5603 314 VLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTI 391 (455)
Q Consensus 314 ILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~ 391 (455)
||+++++.+||+|||+++....... ........+++.|+|||.+. ..++.++|||||||++|||++ |.+||......
T Consensus 153 il~~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 231 (280)
T cd05092 153 CLVGQGLVVKIGDFGMSRDIYSTDY-YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNT 231 (280)
T ss_pred EEEcCCCCEEECCCCceeEcCCCce-eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHH
Confidence 9999999999999999875443221 11122334578899999654 467899999999999999998 99999765533
Q ss_pred hhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 392 LYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 392 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.......... .. ..+..++..+.+++.+||..+|++||++.+|++.|+.
T Consensus 232 ~~~~~~~~~~-~~----------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 232 EAIECITQGR-EL----------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHHHHcCc-cC----------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 2222221111 00 0111234458899999999999999999999999863
No 189
>KOG0196|consensus
Probab=100.00 E-value=1.9e-40 Score=337.13 Aligned_cols=276 Identities=25% Similarity=0.402 Sum_probs=228.6
Q ss_pred ceeeeHHHHHHHhcCCCCCCC---CcCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhH
Q psy5603 151 LIAFTFCDLERATDGFNRKPY---PRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPI 223 (455)
Q Consensus 151 ~~~~~~~~l~~~t~~f~~~~~---~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~ 223 (455)
+.-++|+|-.++...|..+-. -.+.+.||.|.||.||+|+++- ...||||.++.... +...
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt------------ekqr 674 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT------------EKQR 674 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc------------HHHH
Confidence 566889999899888876522 2678999999999999999863 35699999975432 1124
Q ss_pred HHHHHHHHHHhhCCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Q psy5603 224 LLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSK 302 (455)
Q Consensus 224 ~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~ 302 (455)
..|+.|..||.++.||||++|.|.... ....+|.|||+||+|..+|+..++ .+++.|...++++|+.|++||-+ .
T Consensus 675 rdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DG--qftviQLVgMLrGIAsGMkYLsd--m 750 (996)
T KOG0196|consen 675 RDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDG--QFTVIQLVGMLRGIASGMKYLSD--M 750 (996)
T ss_pred hhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCC--ceEeehHHHHHHHHHHHhHHHhh--c
Confidence 559999999999999999999998777 666789999999999999998764 59999999999999999999999 7
Q ss_pred CeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCC--CCCCCCcccc-cCCCCcccchHHHHHHHHHHH
Q psy5603 303 PIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTG--TRPYMPPEAM-HCQISTKTDVFSYGVILLELL 379 (455)
Q Consensus 303 ~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ell 379 (455)
++|||||-..|||++.+..+|++|||++|+..++.... .+..-| ...|.|||++ ..+++.+|||||||||+||.+
T Consensus 751 ~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~--ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVm 828 (996)
T KOG0196|consen 751 NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA--YTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 828 (996)
T ss_pred CchhhhhhhhheeeccceEEEeccccceeecccCCCcc--ccccCCccceeecChhHhhhcccCchhhccccceEEEEec
Confidence 89999999999999999999999999999876654221 222233 3569999965 568999999999999999998
Q ss_pred c-CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhcC
Q psy5603 380 T-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 380 t-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
+ |..||.+.........++. ..+..++.+++..+.+|+..||++|..+||.+.+++..|++++.|
T Consensus 829 SyGERPYWdmSNQdVIkaIe~-----------gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 829 SYGERPYWDMSNQDVIKAIEQ-----------GYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred ccCCCcccccchHHHHHHHHh-----------ccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 8 9999998875544443332 223345667888899999999999999999999999999999876
No 190
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.7e-38 Score=304.47 Aligned_cols=246 Identities=23% Similarity=0.364 Sum_probs=192.1
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.+.||+|+||.||+|.+. +++.||+|.++.... . ....+.+|+.+++.++||||+++++++.+ .
T Consensus 13 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~------~-------~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~ 79 (267)
T cd06645 13 LIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG------E-------DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD 79 (267)
T ss_pred HHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch------h-------HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC
Confidence 4478999999999999875 488999999864321 1 12347789999999999999999998766 8
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++|+||+++++|.+++... ..+++.+++.++.|++.||.|||+ .|++|+||||+||+++.++.+||+|||++.
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 80 KLWICMEFCGGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHS--KGKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEEEEEeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEECcceeee
Confidence 889999999999999998763 468999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccc----cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
...... .......|+..|+|||.+ .+.++.++|+|||||++|+|++|..||......................
T Consensus 155 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T cd06645 155 QITATI---AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKL 231 (267)
T ss_pred EccCcc---cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcc
Confidence 553221 112345799999999975 3357889999999999999999999997654322211111111111100
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+ ...++..+.+++.+|+..+|++||++.+|++
T Consensus 232 ~~-------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 KD-------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred cc-------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00 0123345788999999999999999999875
No 191
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.5e-38 Score=306.09 Aligned_cols=258 Identities=22% Similarity=0.324 Sum_probs=193.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|+.+ ++..||||+++...... .....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 70 (285)
T cd07861 2 YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-----------GVPSTAIREISLLKELQHPNIVCLQDVLMQ 70 (285)
T ss_pred ceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-----------CchHHHHHHHHHHHhcCCCCEeeeEEEEee
Confidence 345588999999999999986 48899999986432211 012447789999999999999999998876
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++ ++|.+++........+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 147 (285)
T cd07861 71 ESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHS--RRVLHRDLKPQNLLIDNKGVIKLADFGL 147 (285)
T ss_pred CCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEEcCCCcEEECcccc
Confidence 78899999996 6898988765544679999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--ccc---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEV--- 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~--- 402 (455)
+....... .......+++.|+|||.+.+ .++.++|+|||||++|+|+||.+||.............. ...
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (285)
T cd07861 148 ARAFGIPV---RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTED 224 (285)
T ss_pred eeecCCCc---ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 87543321 11223467889999997644 368899999999999999999999987653221111110 000
Q ss_pred ------chhhccchhccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 ------PVREVLDKEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ------~~~~~~d~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... ......+. ...++..+.++|.+||..||.+||++.+|++
T Consensus 225 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 225 VWPGVTSLPDY-KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hhhcchhhHHH-HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 00000 00000000 1124456778999999999999999999874
No 192
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=4e-38 Score=302.43 Aligned_cols=255 Identities=26% Similarity=0.443 Sum_probs=197.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-C---cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-G---MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~---~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+++.+.||+|+||.||+|.++. + ..||||.+..... ......|..|+.++++++||||++++++
T Consensus 6 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~ni~~~~~~ 73 (269)
T cd05065 6 VKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYT------------EKQRRDFLSEASIMGQFDHPNIIHLEGV 73 (269)
T ss_pred eEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCC------------HHHHHHHHHHHHHHHhCCCcCcceEEEE
Confidence 4566899999999999999763 3 3699999864311 1114568999999999999999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...++||||+++++|.+++.... ..+++.+++.++.|++.||.|||+ +|++||||||+||+++.++.+||+|
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~--~g~~H~dl~p~nili~~~~~~kl~d 149 (269)
T cd05065 74 VTKSRPVMIITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSE--MNYVHRDLAARNILVNSNLVCKVSD 149 (269)
T ss_pred ECCCCceEEEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecccChheEEEcCCCcEEECC
Confidence 877 77799999999999999987643 358999999999999999999999 8899999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCC--CCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhccc
Q psy5603 327 FGIVKMSETSNMKTMYTENLTG--TRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
||+++................| +..|+|||.+. +.++.++|||||||++||+++ |..||...........+.. ..
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~-~~ 228 (269)
T cd05065 150 FGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ-DY 228 (269)
T ss_pred CccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc-CC
Confidence 9998765433221111111222 45799999664 467889999999999999987 9999987654322222211 11
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..+ .+..++..+.+++.+|+..+|.+||++.+|+..|++++
T Consensus 229 ~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 229 RLP----------PPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred cCC----------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 110 01223455788999999999999999999999998764
No 193
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.5e-38 Score=306.99 Aligned_cols=250 Identities=20% Similarity=0.279 Sum_probs=191.9
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||+||+|.+. +++.||+|.+....... ......+.+|++++++++|+||+++++++..
T Consensus 3 ~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~ 72 (285)
T cd05632 3 RQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKK----------RKGESMALNEKQILEKVNSQFVVNLAYAYETK 72 (285)
T ss_pred eEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhh----------hhHHHHHHHHHHHHHHcCCcCceeEEEEEecC
Confidence 34478999999999999986 48899999986432210 0113447789999999999999999987665
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
+..|+||||+++++|.+++.... ..++++..+..++.|++.||.|||+ ++|+||||||+||++++++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~--~~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 73 DALCLVLTIMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHR--ENTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred CEEEEEEEeccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 78899999999999998886543 3469999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ .....|+..|+|||.+ ...++.++|+|||||++|||++|..||......................
T Consensus 150 ~~~~~~~~----~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-- 223 (285)
T cd05632 150 VKIPEGES----IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV-- 223 (285)
T ss_pred eecCCCCc----ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccc--
Confidence 75432211 1235799999999966 4467889999999999999999999998765332211111100000000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
....++..+.+|+.+|+..+|++||+ +.+++.
T Consensus 224 ------~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 224 ------YSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ------cCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01123445788999999999999999 556554
No 194
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.9e-38 Score=303.43 Aligned_cols=251 Identities=25% Similarity=0.386 Sum_probs=184.6
Q ss_pred ccCcCCCeEEEEEEEcC---CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 177 KLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.||+|+||.||+|...+ ...+|+|.+..... . .....|.+|+.+++.++||||+++++.+.+ ..
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~ 69 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASAT------P------DEQLLFLQEVQPYRELNHPNVLQCLGQCIESIP 69 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCC------h------HHHHHHHHHHHHHHhCCCCCcceEEEEECCCCc
Confidence 59999999999997643 34678887643211 0 113458899999999999999999998877 77
Q ss_pred eEEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.++||||+++|+|.+++..... ....++.....++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||++
T Consensus 70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 147 (269)
T cd05042 70 YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ--ADFIHSDLALRNCQLTADLSVKIGDYGLA 147 (269)
T ss_pred eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh--cCEecccccHhheEecCCCcEEEeccccc
Confidence 8999999999999999976443 2335678889999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc--------CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhH-HHhhhc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH--------CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYY-YLVVEQ 400 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--------~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~-~~~~~~ 400 (455)
+........ .......++..|+|||++. ...+.++|||||||++|||++ |..||......... ......
T Consensus 148 ~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~ 226 (269)
T cd05042 148 LEQYPEDYY-ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQ 226 (269)
T ss_pred cccccchhe-eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhcc
Confidence 754332211 1123345677899999753 235779999999999999999 88898766532211 111111
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+. .+. ....++..+.+++..|+ .||++||++++|++.|.
T Consensus 227 ~~~~~---~~~----~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 227 DIKLP---KPQ----LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CccCC---CCc----ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11111 111 11223445666676666 69999999999999873
No 195
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3e-38 Score=306.44 Aligned_cols=253 Identities=28% Similarity=0.470 Sum_probs=195.1
Q ss_pred cCCCccCcCCCeEEEEEEEc------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++.+.||+|+||.||+|.++ ++..||+|.+..... . .....|.+|+.++++++||||+++++
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~------~------~~~~~~~~ei~~l~~l~h~~iv~~~~ 75 (288)
T cd05050 8 EYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEAS------A------DMQADFQREAALMAEFDHPNIVKLLG 75 (288)
T ss_pred eecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcC------H------HHHHHHHHHHHHHHhcCCCchheEEE
Confidence 45589999999999999864 367899999864321 0 11345889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcC-------------------CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeee
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVN-------------------NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIH 306 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH 306 (455)
++.+ ...|+|+||+++|+|.+++.... ....+++.+++.++.|++.||.|||+ ++++|
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~--~~i~H 153 (288)
T cd05050 76 VCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE--RKFVH 153 (288)
T ss_pred EEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh--CCeec
Confidence 8877 77899999999999999997431 12357899999999999999999999 88999
Q ss_pred cCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCC
Q psy5603 307 RDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKP 384 (455)
Q Consensus 307 ~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p 384 (455)
|||||+||+++.++.++|+|||+++........ .......++..|+|||.+ .+.++.++|||||||++|||++ |..|
T Consensus 154 ~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p 232 (288)
T cd05050 154 RDLATRNCLVGENMVVKIADFGLSRNIYSADYY-KASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQP 232 (288)
T ss_pred ccccHhheEecCCCceEECccccceecccCccc-cccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999998754322111 111223456779999965 4568899999999999999998 8889
Q ss_pred CCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 385 IDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
|.+............... . . .+..++..+.+++.+|+..+|.+||++.|+++.|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~--~--------~-~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 233 YYGMAHEEVIYYVRDGNV--L--------S-CPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CCCCCHHHHHHHHhcCCC--C--------C-CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 876553322222211110 0 0 011234558889999999999999999999999874
No 196
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=3.2e-38 Score=309.06 Aligned_cols=253 Identities=26% Similarity=0.434 Sum_probs=193.3
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCc--EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.++ ++. .+|+|.++.... ......+.+|+.++.++ +||||+++++++
T Consensus 10 ~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~------------~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~ 77 (303)
T cd05088 10 KFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS------------KDDHRDFAGELEVLCKLGHHPNIINLLGAC 77 (303)
T ss_pred eeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCC------------HHHHHHHHHHHHHHHHhcCCCCcceEEEEE
Confidence 34488999999999999975 344 457777642211 01135588899999999 899999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcE
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NI 314 (455)
.. ..+++||||+++++|.+++..... ...+++.+++.++.|++.||+|||+ +|++||||||+||
T Consensus 78 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dlkp~Ni 155 (303)
T cd05088 78 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ--KQFIHRDLAARNI 155 (303)
T ss_pred CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh--CCccccccchheE
Confidence 77 788999999999999999975421 2368999999999999999999999 8899999999999
Q ss_pred EEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHc-CCCCCCCCcchh
Q psy5603 315 LLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTIL 392 (455)
Q Consensus 315 Ll~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~ 392 (455)
|++.++.+||+|||+++...... ......++..|+|||.+.+ .++.++|||||||++|||+| |..||.......
T Consensus 156 li~~~~~~kl~dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~ 231 (303)
T cd05088 156 LVGENYVAKIADFGLSRGQEVYV----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE 231 (303)
T ss_pred EecCCCcEEeCccccCcccchhh----hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH
Confidence 99999999999999986322111 1112234667999996644 56889999999999999998 999997655332
Q ss_pred hHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
....... ..... .+..++..+.+++.+|+..+|++||++.+++..|++++.
T Consensus 232 ~~~~~~~-~~~~~----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~ 282 (303)
T cd05088 232 LYEKLPQ-GYRLE----------KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE 282 (303)
T ss_pred HHHHHhc-CCcCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 2221110 00000 011234457889999999999999999999999988764
No 197
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.5e-38 Score=307.05 Aligned_cols=250 Identities=21% Similarity=0.280 Sum_probs=192.8
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||.||++.++ +++.||||.+........ .....+.+|+.++++++|+|++++++.+.+
T Consensus 3 ~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~----------~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~ 72 (285)
T cd05630 3 RQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKR----------KGESMALNEKQILEKVNSRFVVSLAYAYETK 72 (285)
T ss_pred eeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccch----------HHHHHHHHHHHHHHhCCCCCeeeeeEEEecC
Confidence 34588999999999999986 478999999865322110 012347789999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||++|++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||++++++.++|+|||++
T Consensus 73 ~~~~lv~e~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~--~~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 73 DALCLVLTLMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQ--ERIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred CEEEEEEEecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 88899999999999999886533 2468999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ .....||..|+|||++. +.++.++|+|||||++|+|++|..||....................
T Consensus 150 ~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~---- 221 (285)
T cd05630 150 VHVPEGQT----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ---- 221 (285)
T ss_pred eecCCCcc----ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh----
Confidence 76443221 12347999999999664 4678999999999999999999999986542211111100000000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
......++..+.+|+.+||..||++||+ +.|+++
T Consensus 222 ----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 ----EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ----hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0011223445788999999999999999 788876
No 198
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4e-38 Score=308.24 Aligned_cols=254 Identities=27% Similarity=0.431 Sum_probs=195.8
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCc----EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGM----EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~----~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
+..+.||+|+||.||+|.+. +|. .||+|.+..... . .....+.+|+.++++++||||++++++
T Consensus 10 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~~~~l~h~niv~~~~~ 77 (303)
T cd05110 10 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTG------P------KANVEFMDEALIMASMDHPHLVRLLGV 77 (303)
T ss_pred eeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCC------H------HHHHHHHHHHHHHHhCCCCCcccEEEE
Confidence 34488999999999999875 343 578888753221 0 112358899999999999999999999
Q ss_pred ccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+.....+++++|+++|+|.+++.... ..+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~~v~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dikp~Nill~~~~~~kL~Df 153 (303)
T cd05110 78 CLSPTIQLVTQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEE--RRLVHRDLAARNVLVKSPNHVKITDF 153 (303)
T ss_pred EcCCCceeeehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhh--cCeeccccccceeeecCCCceEEccc
Confidence 88777789999999999999987642 358999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++....... ........++..|+|||.+. ..++.++|||||||++|||++ |..||.+.............. .+
T Consensus 154 g~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~- 230 (303)
T cd05110 154 GLARLLEGDEK-EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGE-RL- 230 (303)
T ss_pred cccccccCccc-ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC-CC-
Confidence 99986543221 11122345677899999664 467889999999999999998 999997654322222221111 00
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+..++..+.+++..||..+|++||++.++++.|+++.+
T Consensus 231 ---------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~ 270 (303)
T cd05110 231 ---------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMAR 270 (303)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 0011123347788999999999999999999999998764
No 199
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.7e-38 Score=301.01 Aligned_cols=248 Identities=23% Similarity=0.299 Sum_probs=196.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++ ++..||+|.++..... . ....+.+|+.++++++|+||+++++.+.+
T Consensus 2 y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-----~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 69 (255)
T cd08219 2 YNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS-----S-------AVEDSRKEAVLLAKMKHPNIVAFKESFEA 69 (255)
T ss_pred ceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch-----H-------HHHHHHHHHHHHHhCCCCCcceEEEEEEE
Confidence 355689999999999999986 4889999998643210 0 13457889999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.... ...+++..++.++.|++.||.|||+ ++++|+||||+||++++++.++|+|||+
T Consensus 70 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dl~p~nili~~~~~~~l~dfg~ 146 (255)
T cd08219 70 DGHLYIVMEYCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIHE--KRVLHRDIKSKNIFLTQNGKVKLGDFGS 146 (255)
T ss_pred CCEEEEEEeeCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEECCCCcEEEcccCc
Confidence 88899999999999999887533 3468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... .......|++.|+|||++.+ ..+.++|+||||+++|+|++|..||...+.............. .
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~-- 219 (255)
T cd08219 147 ARLLTSPG---AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK--P-- 219 (255)
T ss_pred ceeecccc---cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC--C--
Confidence 87654322 11234578999999997654 5788999999999999999999999876532222222111100 0
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.+..++..+.+++.+||..+|++||++.+++.+
T Consensus 220 -------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 220 -------LPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -------CCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 012234458889999999999999999999864
No 200
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.8e-38 Score=307.94 Aligned_cols=262 Identities=23% Similarity=0.340 Sum_probs=196.2
Q ss_pred CCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeee
Q psy5603 166 FNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 166 f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
|.....|++.++||+|+||.||+|.++ +++.||+|.++....... ...+.+|+.++++++||||+++
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA------------PCTAIREVSLLKDLKHANIVTL 69 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc------------hhHHHHHHHHHHhcCCCCcceE
Confidence 333445677799999999999999986 478999999864332110 2236789999999999999999
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
++++.. ...|+||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+|
T Consensus 70 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~lH~--~~i~H~dlkp~Nil~~~~~~~k 144 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLD-KDLKQYLDDCG--NSINMHNVKLFLFQLLRGLNYCHR--RKVLHRDLKPQNLLINERGELK 144 (301)
T ss_pred EEEEecCCeEEEEEeccc-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCHHHEEECCCCcEE
Confidence 998876 78899999996 69999887643 368899999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||++........ ......+++.|+|||.+.+ .++.++|||||||++|||+||.+||...+.......... .
T Consensus 145 l~dfg~~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~ 221 (301)
T cd07873 145 LADFGLARAKSIPTK---TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRIL 221 (301)
T ss_pred ECcCcchhccCCCCC---cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 999999875433211 1223467889999997644 467899999999999999999999987653222111111 0
Q ss_pred ccc----hhhccch------hccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVP----VREVLDK------EAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~----~~~~~d~------~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ .....+. ...... ...++..+.+||.+|+..||.+||+++|+++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 222 GTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred CCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 0000000 000000 1124556889999999999999999999986
No 201
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.8e-38 Score=307.20 Aligned_cols=259 Identities=26% Similarity=0.354 Sum_probs=194.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-----------------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHh
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-----------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLS 234 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-----------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 234 (455)
|++.++||+|+||.||++...+ +..||+|+++.... . .....|.+|+.+++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~------~------~~~~~~~~E~~~l~ 74 (296)
T cd05095 7 LTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDAN------K------NARNDFLKEIKIMS 74 (296)
T ss_pred ceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCC------H------HHHHHHHHHHHHHH
Confidence 4566899999999999986431 34689999864321 0 11345889999999
Q ss_pred hCCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCC--------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCee
Q psy5603 235 QCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNN--------TPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 235 ~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ii 305 (455)
+++|+||+++++++.. ...|+||||+++|+|.+++..... ...+++.++..++.|++.||.|||+ .+++
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~ 152 (296)
T cd05095 75 RLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS--LNFV 152 (296)
T ss_pred hCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH--CCee
Confidence 9999999999998876 788999999999999999976431 1247788999999999999999999 8899
Q ss_pred ecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccc-ccCCCCcccchHHHHHHHHHHHc--CC
Q psy5603 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLT--GM 382 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~-~~~~~~~~sDv~SlGvvl~ellt--G~ 382 (455)
||||||+|||++.++.++|+|||+++........ .......++..|+|||. ..+.++.++|+|||||++|||+| |.
T Consensus 153 H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~ 231 (296)
T cd05095 153 HRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY-RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKE 231 (296)
T ss_pred cccCChheEEEcCCCCEEeccCcccccccCCcce-eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCC
Confidence 9999999999999999999999998755332211 11223345678999994 45678999999999999999998 77
Q ss_pred CCCCCCcchhhHHHhhh--cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 383 KPIDDNNTILYYYLVVE--QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.||.............. ......... ..+..++..+.+|+.+||..+|++||++.+|++.|++
T Consensus 232 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 232 QPYSQLSDEQVIENTGEFFRDQGRQVYL------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred CCccccChHHHHHHHHHHHhhccccccC------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 88876543222111100 000000000 0112234568889999999999999999999999874
No 202
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.8e-38 Score=297.69 Aligned_cols=246 Identities=28% Similarity=0.466 Sum_probs=197.4
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+++.+.||.|+||.||+|... |+.||||.+..... ..+.+.+|+.++++++|+||+++++++.+
T Consensus 8 ~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 72 (256)
T cd05039 8 LKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--------------AAQAFLAEASVMTTLRHPNLVQLLGVVLQG 72 (256)
T ss_pred ccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--------------HHHHHHHHHHHHHhcCCcceeeeEEEEcCC
Confidence 345589999999999999987 78999999864321 14568899999999999999999998775
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||+++++|.+++..... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 73 ~~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~--~~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 73 NPLYIVTEYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEE--KNFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred CCeEEEEEecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHh--CCccchhcccceEEEeCCCCEEEcccccc
Confidence 788999999999999999976432 368999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+...... ....++..|+|||.+ .+.++.++|+||||+++||+++ |..||................ ..
T Consensus 150 ~~~~~~~------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~---- 218 (256)
T cd05039 150 KEASQGQ------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-RM---- 218 (256)
T ss_pred ccccccc------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-CC----
Confidence 8653221 123446679999965 4567889999999999999997 999997665332222111110 00
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+..++..+.+++.+||..+|++||++.++++.|+++
T Consensus 219 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 ------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00112345688899999999999999999999999764
No 203
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=4.6e-38 Score=313.22 Aligned_cols=253 Identities=26% Similarity=0.348 Sum_probs=189.3
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||+|.+. +++.||||++...... ......+.+|+.++++++||||+++++++.
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 84 (343)
T cd07878 16 RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQS-----------LIHARRTYRELRLLKHMKHENVIGLLDVFT 84 (343)
T ss_pred hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhh-----------hHHHHHHHHHHHHHHhcCCCchhhhhhhhc
Confidence 3556699999999999999875 4789999998643210 111345778999999999999999998764
Q ss_pred C-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...|++++++ +++|.+++.. ..+++..+..++.|++.||.|||+ ++|+||||||+|||++.++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~--~~ivHrdikp~Nil~~~~~~~ 157 (343)
T cd07878 85 PATSIENFNEVYLVTNLM-GADLNNIVKC----QKLSDEHVQFLIYQLLRGLKYIHS--AGIIHRDLKPSNVAVNEDCEL 157 (343)
T ss_pred ccccccccCcEEEEeecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecccCChhhEEECCCCCE
Confidence 2 3458899987 8899888764 358999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE- 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~- 399 (455)
||+|||+++..... .....||+.|+|||++.+ .++.++|||||||++|+|++|..||...+..........
T Consensus 158 kl~Dfg~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~ 231 (343)
T cd07878 158 RILDFGLARQADDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEV 231 (343)
T ss_pred EEcCCccceecCCC------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence 99999998864332 224578999999997654 478899999999999999999999987653222111111
Q ss_pred cccchhhccch-----------hccCCCh-------hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 QEVPVREVLDK-----------EAGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 ~~~~~~~~~d~-----------~~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+..+.... .....+. ......+.+||.+||..||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 232 VGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred hCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00010000000 0000000 012334678999999999999999999985
No 204
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.4e-38 Score=299.51 Aligned_cols=252 Identities=28% Similarity=0.380 Sum_probs=192.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++.||+|+||.||+|.++ ++..||||.+......... ......+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~--------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 75 (265)
T cd06652 4 WRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPET--------SKEVNALECEIQLLKNLLHERIVQYYGCLRD 75 (265)
T ss_pred ceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCccc--------HHHHHHHHHHHHHHHhcCCCCeeeEEeEecc
Confidence 345689999999999999976 4889999998643221110 1124568899999999999999999997754
Q ss_pred ---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++||||+++++|.+++... ..+++.....++.|++.||.|||+ .+++|+||||+||+++.++.++|+||
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~l~Df 150 (265)
T cd06652 76 PMERTLSIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHS--NMIVHRDIKGANILRDSVGNVKLGDF 150 (265)
T ss_pred CCCceEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEecCCCCEEECcC
Confidence 3578999999999999998763 358899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++................|+..|+|||.+. ..++.++|+|||||++|||++|..||................
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~----- 225 (265)
T cd06652 151 GASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQP----- 225 (265)
T ss_pred ccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCC-----
Confidence 99875432211111123356899999999664 457889999999999999999999997654222111111000
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....+......+.++|.+|+ .+|++||++++|++
T Consensus 226 ----~-~~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 226 ----T-NPVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred ----C-CCCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhc
Confidence 0 01112334556778888888 48999999999875
No 205
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.5e-38 Score=328.07 Aligned_cols=251 Identities=22% Similarity=0.279 Sum_probs=182.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC------ccceeee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK------HVNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l 244 (455)
|++.++||+|+||+||+|.+. +++.||||+++.... . ...+..|++++..++ |.+++.+
T Consensus 131 y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~------~--------~~~~~~e~~~l~~l~~~~~~~~~~i~~i 196 (467)
T PTZ00284 131 FKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK------Y--------TRDAKIEIQFMEKVRQADPADRFPLMKI 196 (467)
T ss_pred EEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh------h--------HHHHHHHHHHHHHHhhcCcccCcceeee
Confidence 456689999999999999976 478899999863211 0 122445666666554 4568888
Q ss_pred cccccC--ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC--
Q psy5603 245 LGLCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-- 320 (455)
Q Consensus 245 ~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~-- 320 (455)
++++.. ...|+||+++ |++|.+++... .++++..+..|+.|++.||.|||+. .|||||||||+|||++.++
T Consensus 197 ~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~-~gIiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 197 QRYFQNETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTE-LHLMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEEEEcCCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhc-CCeecCCCCHHHEEEecCCcc
Confidence 887755 5789999988 88999988763 4699999999999999999999971 3899999999999998765
Q ss_pred --------------ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCC
Q psy5603 321 --------------VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPI 385 (455)
Q Consensus 321 --------------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~ 385 (455)
.+||+|||++...... .....||+.|+|||++.+ .++.++|||||||++|||+||++||
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf 345 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDERHS------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCccc------cccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 4999999987543211 234689999999997644 6889999999999999999999999
Q ss_pred CCCcchhhHHHhhhcccchh-------------hccch----------h-----c--cCCChhHHHHHHHHHHHhhhccC
Q psy5603 386 DDNNTILYYYLVVEQEVPVR-------------EVLDK----------E-----A--GEWNETHVETLISIVFEKCCVFE 435 (455)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~-------------~~~d~----------~-----~--~~~~~~~~~~~l~~Li~~~l~~d 435 (455)
...+.......+......++ ++++. . . ...........+.+||.+||..|
T Consensus 346 ~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 425 (467)
T PTZ00284 346 DTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYD 425 (467)
T ss_pred CCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcC
Confidence 87664322222111000000 00000 0 0 00000111345779999999999
Q ss_pred cCCCCCHHHHHH
Q psy5603 436 KDKRASMRDIVD 447 (455)
Q Consensus 436 p~~RPs~~evl~ 447 (455)
|++||+++|+++
T Consensus 426 P~~R~ta~e~L~ 437 (467)
T PTZ00284 426 RQKRLNARQMTT 437 (467)
T ss_pred hhhCCCHHHHhc
Confidence 999999999986
No 206
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.6e-38 Score=308.26 Aligned_cols=255 Identities=27% Similarity=0.428 Sum_probs=195.5
Q ss_pred cCCCccCcCCCeEEEEEEEc--------CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceee
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK--------NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR 243 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~ 243 (455)
.++++||+|+||.||+|... .+..||+|.++.... . .....+.+|+.+++++ +||||++
T Consensus 15 ~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~iv~ 82 (314)
T cd05099 15 VLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNAT------D------KDLADLISEMELMKLIGKHKNIIN 82 (314)
T ss_pred eeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCC------h------HHHHHHHHHHHHHHhccCCCCeee
Confidence 34589999999999999752 245689999863221 0 0134588899999999 6999999
Q ss_pred ecccccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCC
Q psy5603 244 LLGLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Di 309 (455)
+++++.+ ...|+||||+++|+|.+++..... ...+++.++..++.|++.||.|||+ +|++||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~--~gi~H~dl 160 (314)
T cd05099 83 LLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES--RRCIHRDL 160 (314)
T ss_pred EEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH--CCeeeccc
Confidence 9998877 778999999999999999976321 2458999999999999999999999 89999999
Q ss_pred CCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCC
Q psy5603 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~ 387 (455)
||+|||+++++.+||+|||+++......... ......++..|+|||.+ .+.++.++|||||||++|||++ |..||..
T Consensus 161 kp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~ 239 (314)
T cd05099 161 AARNVLVTEDNVMKIADFGLARGVHDIDYYK-KTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPG 239 (314)
T ss_pred cceeEEEcCCCcEEEcccccccccccccccc-ccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCC
Confidence 9999999999999999999998654322111 11222445679999965 4467889999999999999999 8999976
Q ss_pred CcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 388 NNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.............. .. ..+..++..+.+++.+|+..+|++||++.++++.|+++.
T Consensus 240 ~~~~~~~~~~~~~~-~~----------~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 240 IPVEELFKLLREGH-RM----------DKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred CCHHHHHHHHHcCC-CC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 55332222221110 00 001223445778999999999999999999999998875
No 207
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.7e-38 Score=314.92 Aligned_cols=251 Identities=22% Similarity=0.283 Sum_probs=192.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+++.+ +++.||+|++...... .......+.+|..++..++|+||+.+++++.+
T Consensus 3 y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~----------~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~ 72 (331)
T cd05624 3 FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEML----------KRAETACFREERNVLVNGDCQWITTLHYAFQD 72 (331)
T ss_pred ceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHH----------hhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 456689999999999999986 4788999998642210 01123457889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||++||+|.+++.... ..+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 73 ~~~~~lv~Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~--~~iiHrDlkp~Nill~~~~~~kl~DfG~ 148 (331)
T cd05624 73 ENYLYLVMDYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQ--LHYVHRDIKPDNVLLDMNGHIRLADFGS 148 (331)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCchHHEEEcCCCCEEEEeccc
Confidence 78899999999999999997643 368999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcc--
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE-- 401 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~-- 401 (455)
++....... .......||+.|+|||++. +.++.++|+|||||++|||++|..||...+.......+....
T Consensus 149 a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~ 226 (331)
T cd05624 149 CLKMNQDGT--VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEER 226 (331)
T ss_pred eeeccCCCc--eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCc
Confidence 876543321 1223457999999999765 346889999999999999999999998765433322222111
Q ss_pred cchhhccchhccCCChhHHHHHHHHHHHhhhccCcCC--CCCHHHHHH
Q psy5603 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDK--RASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~--RPs~~evl~ 447 (455)
..++..+ ..++..+.+++.+|+..++++ |++++++++
T Consensus 227 ~~~p~~~---------~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 227 FQFPSHI---------TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred ccCCCcc---------ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 1111111 123455778888888765443 567777764
No 208
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-38 Score=327.70 Aligned_cols=251 Identities=21% Similarity=0.293 Sum_probs=188.0
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|.+.. ++.||||... ...+.+|++++++++|+|||++++++..
T Consensus 171 y~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~-------------------~~~~~~E~~iL~~L~HpnIv~l~~~~~~ 231 (461)
T PHA03211 171 FAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW-------------------YASSVHEARLLRRLSHPAVLALLDVRVV 231 (461)
T ss_pred eEEEEEEccCCCeEEEEEEECCCCCEEEEeccc-------------------ccCHHHHHHHHHHCCCCCCCcEEEEEEE
Confidence 4566899999999999999874 7889999642 1126689999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||+++ .++|.+++.... .++++.+++.|+.|++.||.|||+ +||+||||||+|||++.++.+||+|||+
T Consensus 232 ~~~~~lv~e~~-~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~--~gIvHrDLKP~NILl~~~~~vkL~DFGl 306 (461)
T PHA03211 232 GGLTCLVLPKY-RSDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHG--EGIIHRDIKTENVLVNGPEDICLGDFGA 306 (461)
T ss_pred CCEEEEEEEcc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEEECcCCHHHEEECCCCCEEEcccCC
Confidence 7889999999 578988886532 369999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcc--------hhhHHHhhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT--------ILYYYLVVEQ 400 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~--------~~~~~~~~~~ 400 (455)
++....... ........||..|+|||++.+ .++.++|||||||++|||++|..|+..... ......+...
T Consensus 307 a~~~~~~~~-~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~ 385 (461)
T PHA03211 307 ACFARGSWS-TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQA 385 (461)
T ss_pred ceecccccc-cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhh
Confidence 986543221 112234679999999997654 578899999999999999998876543221 1111111111
Q ss_pred ccc---hhhccc----------------hhc--cCCCh-hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVP---VREVLD----------------KEA--GEWNE-THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~---~~~~~d----------------~~~--~~~~~-~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... +..... +.. ..|.. ......+.+||.+||..||++||++.|+++
T Consensus 386 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 386 QVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred ccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 100 000000 000 00110 122346788999999999999999999986
No 209
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.9e-38 Score=307.84 Aligned_cols=256 Identities=24% Similarity=0.309 Sum_probs=194.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++.+. ++..||+|.++.... . .....+.+|++++++++||||+++++++.+
T Consensus 3 ~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 70 (308)
T cd06615 3 FEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK------P------AIRNQIIRELKVLHECNSPYIVGFYGAFYS 70 (308)
T ss_pred ceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC------H------HHHHHHHHHHHHHHhCCCCCCCeEEEEEee
Confidence 345589999999999999976 478899998864321 0 113458899999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..|+||||+++++|.+++... .++++..+..++.|++.||.|||+. .+++||||||+|||++.++.+||+|||+
T Consensus 71 ~~~~~lv~ey~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (308)
T cd06615 71 DGEISICMEHMDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREK-HKIMHRDVKPSNILVNSRGEIKLCDFGV 146 (308)
T ss_pred CCEEEEEeeccCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhh-CCEEECCCChHHEEEecCCcEEEccCCC
Confidence 8889999999999999999763 4689999999999999999999972 3799999999999999999999999998
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch----
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV---- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~---- 404 (455)
+....... .....|+..|+|||.+.+ .++.++|+|||||++|+|++|..||...+...............
T Consensus 147 ~~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 221 (308)
T cd06615 147 SGQLIDSM-----ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKE 221 (308)
T ss_pred cccccccc-----cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccC
Confidence 86543221 234578999999997654 57889999999999999999999997654222211111100000
Q ss_pred ------------------hhccchh----ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 405 ------------------REVLDKE----AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 405 ------------------~~~~d~~----~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.+..+.. ....+...++..+.+++.+|+..+|++||++.+|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 222 SHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000000 0011112245568899999999999999999999763
No 210
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.8e-38 Score=297.90 Aligned_cols=248 Identities=29% Similarity=0.411 Sum_probs=195.0
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
++||+|+||.||++.+++++.||+|++...... .....+.+|+++++++.|+||+++++++.+ ...+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 68 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP------------DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIY 68 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH------------HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeE
Confidence 369999999999999876899999988643220 113458999999999999999999998877 7889
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
+||||+.+++|.+++.... ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||+++...
T Consensus 69 ~v~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~--~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~ 144 (251)
T cd05041 69 IVMELVPGGSLLTFLRKKK--NRLTVKKLLQMSLDAAAGMEYLES--KNCIHRDLAARNCLVGENNVLKISDFGMSREEE 144 (251)
T ss_pred EEEEcCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHh--CCEehhhcCcceEEEcCCCcEEEeecccccccc
Confidence 9999999999999997643 368899999999999999999999 889999999999999999999999999987554
Q ss_pred cCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 335 TSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
... .........++..|+|||.+. +.++.++|+|||||++|||+| |..||............... .
T Consensus 145 ~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~-~---------- 212 (251)
T cd05041 145 GGI-YTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG-Y---------- 212 (251)
T ss_pred CCc-ceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC-C----------
Confidence 221 111112223466799999664 467889999999999999999 89999766533222222111 0
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
....+...+..+.+++.+|+..+|++||++.+|++.|+.
T Consensus 213 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhhC
Confidence 011122345568889999999999999999999998863
No 211
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-38 Score=321.77 Aligned_cols=251 Identities=24% Similarity=0.305 Sum_probs=189.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc---CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK---NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
|++.+.||+|+||.||++... .+..||||.+.... .+.+|++++++++||||+++++++
T Consensus 94 y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------------------~~~~E~~il~~l~h~~iv~~~~~~ 155 (392)
T PHA03207 94 YNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------------------TPGREIDILKTISHRAIINLIHAY 155 (392)
T ss_pred eEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------------------cHHHHHHHHHhcCCCCccceeeeE
Confidence 567799999999999999764 25789999875321 156899999999999999999977
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.. ...|+|||++ +++|.+++.. ..++++..++.++.|++.||.|||+ +||+||||||+|||++.++.+||+||
T Consensus 156 ~~~~~~~lv~e~~-~~~l~~~l~~---~~~l~~~~~~~i~~ql~~aL~~LH~--~givHrDlkp~Nill~~~~~~~l~Df 229 (392)
T PHA03207 156 RWKSTVCMVMPKY-KCDLFTYVDR---SGPLPLEQAITIQRRLLEALAYLHG--RGIIHRDVKTENIFLDEPENAVLGDF 229 (392)
T ss_pred eeCCEEEEEehhc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEccC
Confidence 66 7889999998 5789888854 3569999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch----hhHHHhhh-cc
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI----LYYYLVVE-QE 401 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~----~~~~~~~~-~~ 401 (455)
|+++....... ........||+.|+|||++.+ .++.++|||||||++|||++|..||.+.... ........ ..
T Consensus 230 G~a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~ 308 (392)
T PHA03207 230 GAACKLDAHPD-TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQV 308 (392)
T ss_pred ccccccCcccc-cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhcc
Confidence 99876543321 112235689999999997754 5788999999999999999999999765421 11110000 00
Q ss_pred cc--hhh------------ccchhccCCC------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 402 VP--VRE------------VLDKEAGEWN------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~--~~~------------~~d~~~~~~~------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+ +.. +.......+. ....+..+.++|.+||..+|++||++.+++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~ 374 (392)
T PHA03207 309 HPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILS 374 (392)
T ss_pred CccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 000 0000000000 0123445778999999999999999999875
No 212
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.6e-38 Score=303.36 Aligned_cols=250 Identities=30% Similarity=0.443 Sum_probs=193.3
Q ss_pred CccCcCCCeEEEEEEEcC-------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 176 NKLGEGQFGTVYYGKLKN-------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
+.||+|+||.||+|+.++ +..||||.+..... . .....|.+|+.++++++||||+++++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 68 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT------D------QEKKEFLKEAHLMSNFNHPNIVKLLGVC 68 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccc------h------hhHHHHHHHHHHHHhcCCCCeeeEeeee
Confidence 359999999999998753 25789998854321 0 0134588999999999999999999987
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcC----CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC---
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVN----NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF--- 320 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~--- 320 (455)
.+ ...++||||+++++|.+++.... ....+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++
T Consensus 69 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~ 146 (269)
T cd05044 69 LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ--MHFIHRDLAARNCLVSEKGYDA 146 (269)
T ss_pred cCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh--CCcccCCCChheEEEecCCCCC
Confidence 76 78899999999999999997532 12458899999999999999999999 8899999999999999887
Q ss_pred --ceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHH
Q psy5603 321 --VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 321 --~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
.++|+|||+++........ .......++..|+|||.+ .+.++.++|||||||++|||+| |..||...+.......
T Consensus 147 ~~~~~l~dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~ 225 (269)
T cd05044 147 DRVVKIGDFGLARDIYKSDYY-RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH 225 (269)
T ss_pred CcceEECCccccccccccccc-ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH
Confidence 8999999998755432211 111233567889999965 4567899999999999999998 9999976553322221
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..... . ...+..++..+.+++.+||..+|.+||++.+|++.|++
T Consensus 226 ~~~~~-~----------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 226 VTAGG-R----------LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred HhcCC-c----------cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11110 0 01112345668899999999999999999999998864
No 213
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-38 Score=311.39 Aligned_cols=257 Identities=27% Similarity=0.426 Sum_probs=197.9
Q ss_pred CcCCCccCcCCCeEEEEEEEcC--------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Ccccee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLL 242 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv 242 (455)
|++++.||+|+||.||+|.+.. +..||+|.++.... . .....+.+|+++++++ +||||+
T Consensus 14 ~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~~h~~iv 81 (334)
T cd05100 14 LTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDAT------D------KDLSDLVSEMEMMKMIGKHKNII 81 (334)
T ss_pred eeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccC------H------HHHHHHHHHHHHHHhhcCCCCee
Confidence 4567899999999999997531 23689998864221 0 1145688999999999 899999
Q ss_pred eecccccC-ceeEEEEEeccCCCHHHHHhhcCC-------------CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecC
Q psy5603 243 RLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNN-------------TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRD 308 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~D 308 (455)
++++++.. ...++|+||+++|+|.+++..... ...+++.+++.++.|++.||.|||+ +|++|||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~--~givH~d 159 (334)
T cd05100 82 NLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS--QKCIHRD 159 (334)
T ss_pred eeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH--CCeeccc
Confidence 99998877 778999999999999999975321 2358899999999999999999999 8899999
Q ss_pred CCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCC
Q psy5603 309 VKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPID 386 (455)
Q Consensus 309 ikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~ 386 (455)
|||+|||++.++.+||+|||+++........ .......++..|+|||++ ...++.++|||||||++|||++ |..||.
T Consensus 160 lkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~ 238 (334)
T cd05100 160 LAARNVLVTEDNVMKIADFGLARDVHNIDYY-KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYP 238 (334)
T ss_pred cccceEEEcCCCcEEECCcccceeccccccc-ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCC
Confidence 9999999999999999999998765432211 112223456779999966 4467889999999999999998 899998
Q ss_pred CCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 387 DNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
............... .. . .+..++..+.+++.+|+..+|++||++.++++.|++++.
T Consensus 239 ~~~~~~~~~~~~~~~-~~-~---------~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~ 295 (334)
T cd05100 239 GIPVEELFKLLKEGH-RM-D---------KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLT 295 (334)
T ss_pred CCCHHHHHHHHHcCC-CC-C---------CCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhh
Confidence 765333222221110 00 0 011233457889999999999999999999999998763
No 214
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=8.6e-38 Score=297.58 Aligned_cols=247 Identities=25% Similarity=0.433 Sum_probs=194.3
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
++.+.||+|+||.||+|.+.++..+|+|.+..... ....|.+|++++++++|||++++++++.. .
T Consensus 7 ~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 72 (256)
T cd05112 7 TLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM--------------SEEDFIEEAQVMMKLSHPKLVQLYGVCTERS 72 (256)
T ss_pred EEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC--------------CHHHHHHHHHHHHhCCCCCeeeEEEEEccCC
Confidence 34488999999999999987778999999863321 02348899999999999999999998776 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||+++++|.+++.... .++++..+..++.+++.|+.|||+ .+++||||||+||+++.++.+||+|||+++
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 73 PICLVFEFMEHGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLES--SNVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred ceEEEEEcCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH--CCccccccccceEEEcCCCeEEECCCccee
Confidence 8899999999999999987643 358899999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......++..|+|||.+. +.++.++|+||||+++|||++ |..||................ .
T Consensus 149 ~~~~~~~~--~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~------ 219 (256)
T cd05112 149 FVLDDQYT--SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF-R------ 219 (256)
T ss_pred ecccCccc--ccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC-C------
Confidence 65432211 112234567899999664 567889999999999999998 999998655332222211110 0
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+...+..+.+++.+|+..+|++||++.+|++.|.
T Consensus 220 ----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 220 ----LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred ----CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 0011112355888999999999999999999998873
No 215
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.8e-38 Score=311.06 Aligned_cols=258 Identities=19% Similarity=0.241 Sum_probs=191.0
Q ss_pred CCCccCcC--CCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 174 RGNKLGEG--QFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 174 ~~~~LG~G--~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+.++||+| +||+||++..+ +|+.||||++...... ......+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~ 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT-----------NEMVTFLQGELHVSKLFNHPNIVPYRATFIA 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc-----------HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE
Confidence 34789999 78999999876 5899999998643220 1113457789999999999999999998876
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++|+|.+++.... ...+++..++.++.|++.||.|||+ ++|+||||||+|||++.++.++++|||.
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~--~~iiH~dlkp~Nil~~~~~~~~l~~~~~ 147 (327)
T cd08227 71 DNELWVVTSFMAYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHH--MGYVHRSVKASHILISVDGKVYLSGLRS 147 (327)
T ss_pred CCEEEEEEeccCCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCChhhEEEecCCcEEEcccch
Confidence 78899999999999999986533 2358999999999999999999999 8899999999999999999999999986
Q ss_pred ccccccCCcc----eeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 330 VKMSETSNMK----TMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+......... ........++..|+|||++.+ .++.++|||||||++|||++|..||...............
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~-- 225 (327)
T cd08227 148 NLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNG-- 225 (327)
T ss_pred hhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcC--
Confidence 5432211100 011123357788999997753 4788999999999999999999999865422211111100
Q ss_pred chhhccc-------------------hhc-----------------cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 403 PVREVLD-------------------KEA-----------------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 403 ~~~~~~d-------------------~~~-----------------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
.++..++ ... .......++..+.+|+.+|+..||++|||+++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell 305 (327)
T cd08227 226 TVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLL 305 (327)
T ss_pred CccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHh
Confidence 0000000 000 0001123455788999999999999999999997
Q ss_pred H
Q psy5603 447 D 447 (455)
Q Consensus 447 ~ 447 (455)
+
T Consensus 306 ~ 306 (327)
T cd08227 306 N 306 (327)
T ss_pred c
Confidence 6
No 216
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=5.4e-38 Score=301.33 Aligned_cols=254 Identities=28% Similarity=0.359 Sum_probs=195.1
Q ss_pred HHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC
Q psy5603 159 LERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK 237 (455)
Q Consensus 159 l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 237 (455)
++.+++++... ..||+|+||.||+|.+. ++..||+|.+..... . ....+.+|+.++++++
T Consensus 3 ~~~~~~~~~~~------~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~ 63 (268)
T cd06624 3 YEYEYDENGER------VVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS------R-------YVQPLHEEIALHSYLK 63 (268)
T ss_pred cccccccCCce------EEEecCCceEEEEeEecCCCcEEEEEEecCCCH------H-------HHHHHHHHHHHHHhcC
Confidence 44556677666 78999999999999976 477899998864321 1 1345889999999999
Q ss_pred ccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcE
Q psy5603 238 HVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPL--DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 238 h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NI 314 (455)
|+||+++++++.. ...++|+||+++++|.+++.... .++ ++..+..++.|++.||.|||+ ++|+||||||+||
T Consensus 64 h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~--~~i~h~dl~p~ni 139 (268)
T cd06624 64 HRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKW--GPLKDNEQTIIFYTKQILEGLKYLHD--NQIVHRDIKGDNV 139 (268)
T ss_pred CCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhc--ccCCCcHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHE
Confidence 9999999998877 78899999999999999997643 234 888999999999999999999 8899999999999
Q ss_pred EEcC-CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcc
Q psy5603 315 LLDE-NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 315 Ll~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~ 390 (455)
+++. ++.++|+|||++........ ......|+..|+|||.+.+ .++.++|+||||+++|+|++|..||.....
T Consensus 140 l~~~~~~~~~l~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~ 216 (268)
T cd06624 140 LVNTYSGVVKISDFGTSKRLAGINP---CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE 216 (268)
T ss_pred EEcCCCCeEEEecchhheecccCCC---ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC
Confidence 9986 67999999999875533221 1223468899999997643 267899999999999999999999976542
Q ss_pred hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......... ... ....-+..+...+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 217 PQAAMFKVG-MFK--------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred hhhhHhhhh-hhc--------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 111110000 000 000011234455788999999999999999999875
No 217
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=9.1e-38 Score=303.83 Aligned_cols=255 Identities=25% Similarity=0.352 Sum_probs=198.1
Q ss_pred cCCCCCCCCcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCcccee
Q psy5603 164 DGFNRKPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL 242 (455)
Q Consensus 164 ~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv 242 (455)
.++.....|++.++||.|+||.||+|.++. +..||+|.+..... . ....+.+|+++++.++||||+
T Consensus 6 ~~~~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~ 72 (292)
T cd06644 6 RDLDPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSE------E-------ELEDYMVEIEILATCNHPYIV 72 (292)
T ss_pred cccCcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCH------H-------HHHHHHHHHHHHHhCCCCcEe
Confidence 345555667888999999999999999864 78999999864211 1 145588899999999999999
Q ss_pred eecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 243 RLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 243 ~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
++++.+.. ...|+||||+++++|..++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.
T Consensus 73 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nili~~~~~ 148 (292)
T cd06644 73 KLLGAFYWDGKLWIMIEFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHS--MKIIHRDLKAGNVLLTLDGD 148 (292)
T ss_pred eeEEEEEeCCeEEEEEecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhc--CCeeecCCCcceEEEcCCCC
Confidence 99997655 78899999999999988876533 358999999999999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHH
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
+||+|||++....... .......|+..|+|||.+. ..++.++|+|||||++|||++|.+||...+......
T Consensus 149 ~kl~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 225 (292)
T cd06644 149 IKLADFGVSAKNVKTL---QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 225 (292)
T ss_pred EEEccCccceeccccc---cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHH
Confidence 9999999876533221 1123456889999999763 235779999999999999999999997655322221
Q ss_pred HhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....... +.. ..+..++..+.+++.+||..+|++||++.++++
T Consensus 226 ~~~~~~~--~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 226 KIAKSEP--PTL-------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHhcCCC--ccC-------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111110 000 011233445788999999999999999999975
No 218
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.4e-38 Score=316.82 Aligned_cols=254 Identities=22% Similarity=0.267 Sum_probs=190.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||+|.+. .++.||||++....... .....+.+|+.+++.++||||+++++++.
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~h~~ii~~~~~~~ 93 (364)
T cd07875 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQ-----------THAKRAYRELVLMKCVNHKNIIGLLNVFT 93 (364)
T ss_pred ceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCc-----------hhHHHHHHHHHHHHhcCCCCccccceeec
Confidence 3556699999999999999976 47899999986432110 11345778999999999999999998654
Q ss_pred C-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...|+||||+. ++|.+.+.. .+++..+..++.|++.||+|||+ ++|+||||||+|||++.++.+
T Consensus 94 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~--~~ivH~Dlkp~NIll~~~~~~ 165 (364)
T cd07875 94 PQKSLEEFQDVYIVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTL 165 (364)
T ss_pred ccccccccCeEEEEEeCCC-CCHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHhh--CCeecCCCCHHHEEECCCCcE
Confidence 3 34699999995 578777753 47899999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
||+|||+++...... ......||..|+|||++.+ .++.++|||||||++|||++|..||...+.......... -
T Consensus 166 kL~DfG~a~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 241 (364)
T cd07875 166 KILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241 (364)
T ss_pred EEEeCCCccccCCCC----cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 999999998654322 1234578999999997644 678899999999999999999999987663322222111 0
Q ss_pred ccchhh-----------ccchhc---------------cCCC---hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVRE-----------VLDKEA---------------GEWN---ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~-----------~~d~~~---------------~~~~---~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+.++ ...... ..+. .......+.+||.+|+..||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~ 317 (364)
T cd07875 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317 (364)
T ss_pred CCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 000000 0000 0112345788999999999999999999976
No 219
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.5e-38 Score=303.04 Aligned_cols=245 Identities=24% Similarity=0.389 Sum_probs=190.8
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|... +++.||+|++..... . ...+.+|+.++.++ +|+||+++++++..
T Consensus 9 ~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------~--------~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 74 (272)
T cd06637 9 ELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------E--------EEEIKQEINMLKKYSHHRNIATYYGAFIK 74 (272)
T ss_pred hHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc------c--------HHHHHHHHHHHHHhcCCCCeeeEeeEEee
Confidence 34488999999999999976 478899999864321 1 23477899999998 79999999997753
Q ss_pred -------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 251 -------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
...|+||||+++++|.+++.... ...+++..+..++.|++.||.|||+ ++++|+||||+||++++++.+|
T Consensus 75 ~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~--~~ivh~dl~~~nili~~~~~~~ 151 (272)
T cd06637 75 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQ--HKVIHRDIKGQNVLLTENAEVK 151 (272)
T ss_pred cCCCCCCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCCccCCCCHHHEEECCCCCEE
Confidence 35789999999999999987633 3468999999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHh
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
|+|||+++...... .......|+..|+|||++. ..++.++|+|||||++|||++|..||............
T Consensus 152 l~Dfg~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 152 LVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred EccCCCceeccccc---ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 99999987543221 1123467899999999763 24677999999999999999999999765432222111
Q ss_pred hhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... .. .......++..+.+|+.+||..+|.+||++.++++
T Consensus 229 ~~~--~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 PRN--PA--------PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred hcC--CC--------CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 110 00 01111223456889999999999999999999875
No 220
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-37 Score=296.80 Aligned_cols=248 Identities=26% Similarity=0.343 Sum_probs=195.8
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++..+. ++.||+|++...... ......+.+|++++++++|+|++++++.+..
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (257)
T cd08223 2 YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS-----------RRERKAAEQEAQLLSQLKHPNIVAYRESWEG 70 (257)
T ss_pred ceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC-----------HHHHHHHHHHHHHHHhCCCCCeeeeeeeecC
Confidence 4567899999999999999764 788999998643221 0113458899999999999999999987653
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|+||||+++++|.+++.... ..++++.++..++.+++.||.+||+ .+++||||||+||+++.++.++|+|||
T Consensus 71 ~~~~~~lv~e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH~--~~i~H~di~p~nil~~~~~~~~l~df~ 147 (257)
T cd08223 71 EDGLLYIVMGFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLHE--KHILHRDLKTQNVFLTRTNIIKVGDLG 147 (257)
T ss_pred CCCEEEEEecccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCchhEEEecCCcEEEeccc
Confidence 46789999999999999997633 3468999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|++.|+|||... +.++.++|+||||+++|+|++|..||...+............. .
T Consensus 148 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~--~-- 220 (257)
T cd08223 148 IARVLENQCD---MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL--P-- 220 (257)
T ss_pred ceEEecccCC---ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC--C--
Confidence 9876543221 223457899999999664 4578899999999999999999999986653322222111111 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..++..+.+++.+|+..+|++||++.++++
T Consensus 221 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 -------PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -------CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 011234556889999999999999999999875
No 221
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=9.1e-38 Score=300.16 Aligned_cols=252 Identities=21% Similarity=0.318 Sum_probs=184.4
Q ss_pred ccCcCCCeEEEEEEEcCCc---EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 177 KLGEGQFGTVYYGKLKNGM---EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~---~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.||+|+||.||+|...++. .+++|.+..... . .....|.+|+.+++.++||||+++++.+.+ ..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~------~------~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 69 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANAS------S------KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIP 69 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCC------h------HHHHHHHHHHHHHhccCCcchhheEEEecCCCc
Confidence 5999999999999865433 456666543211 0 014568999999999999999999998877 77
Q ss_pred eEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.|+||||+++|+|.+++..... ...++...+..++.|++.||+|||+ .+++||||||+|||++.++.+||+|||++.
T Consensus 70 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~--~~i~H~dikp~nil~~~~~~~~l~Dfg~~~ 147 (268)
T cd05086 70 YLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK--HNFLHSDLALRNCFLTSDLTVKVGDYGIGP 147 (268)
T ss_pred cEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH--CCeeccCCccceEEEcCCccEEeccccccc
Confidence 8999999999999999976432 3456778888999999999999999 889999999999999999999999999876
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccccC--------CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMHC--------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~ 402 (455)
...... .........|+..|+|||++.. ..+.++|||||||++|||++ |..||..............+.
T Consensus 148 ~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~- 225 (268)
T cd05086 148 SRYKED-YIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ- 225 (268)
T ss_pred ccCcch-hhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc-
Confidence 432221 1111234578899999997632 24678999999999999997 677887655322222111111
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
.....++... ......+.+++..|+ .+|++||++.+|++.|-
T Consensus 226 -~~~~~~~~~~----~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 226 -QVKLFKPQLE----LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred -ccccCCCccC----CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 1111122111 113344666787777 67999999999998873
No 222
>KOG0577|consensus
Probab=100.00 E-value=1.9e-39 Score=320.65 Aligned_cols=239 Identities=27% Similarity=0.425 Sum_probs=198.9
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||.|+||.||-+++. +...||||++.-... ...+. .+.+..|+..|.+++|||++.+-|++.. ...
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKMsySGK------Qs~EK----WqDIlKEVrFL~~l~HPntieYkgCyLre~Ta 101 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK------QSNEK----WQDILKEVRFLRQLRHPNTIEYKGCYLREHTA 101 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeecccccc------ccHHH----HHHHHHHHHHHHhccCCCcccccceeeccchH
Confidence 67999999999999975 578899999854322 22222 4458889999999999999999998766 667
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
+|||||| -||-.|++.-.. .|+.+..+..|+.+.+.||+|||+ ++.||||||..||||.+.|.+||+|||.|...
T Consensus 102 WLVMEYC-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS--~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~ 176 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHS--HNRIHRDIKAGNILLSEPGLVKLADFGSASIM 176 (948)
T ss_pred HHHHHHH-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHH--hhHHhhhccccceEecCCCeeeeccccchhhc
Confidence 8999999 688888887653 489999999999999999999999 88999999999999999999999999988765
Q ss_pred ccCCcceeeeccCCCCCCCCCcccc----cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhh-HHHhhhcccchhhcc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILY-YYLVVEQEVPVREVL 408 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~-~~~~~~~~~~~~~~~ 408 (455)
.. ...++|||.|||||++ .|.|+-++|||||||+-.||.-.++|+..++...- +....++...+
T Consensus 177 ~P-------AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtL---- 245 (948)
T KOG0577|consen 177 AP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL---- 245 (948)
T ss_pred Cc-------hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCC----
Confidence 43 3468999999999965 57899999999999999999999999998875433 33333332222
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+...++..+.+|+..||..-|..|||..+++.
T Consensus 246 -------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 246 -------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 24467788999999999999999999998865
No 223
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=5.9e-38 Score=303.50 Aligned_cols=247 Identities=25% Similarity=0.399 Sum_probs=193.5
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+.. +..+|+|.+..... . ....+.+|+++++.++||||+++++++..
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~ii~~~~~~~~ 73 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE------E-------ELEDYMVEIDILASCDHPNIVKLLDAFYY 73 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH------H-------HHHHHHHHHHHHHHCCCCCeeeEEEEEee
Confidence 4555889999999999999874 67889998853211 1 14458899999999999999999997766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|..++.... .++++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~~~v~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH~--~~i~H~dlkp~nili~~~~~~kl~dfg~ 149 (282)
T cd06643 74 ENNLWILIEFCAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLHE--NKIIHRDLKAGNILFTLDGDIKLADFGV 149 (282)
T ss_pred CCEEEEEEEecCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCcccEEEccCCCEEEccccc
Confidence 78899999999999998876532 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+....... .......||..|+|||++. ..++.++|+|||||++|||++|.+||..................
T Consensus 150 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd06643 150 SAKNTRTI---QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP 226 (282)
T ss_pred cccccccc---cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCC
Confidence 87543221 1123457899999999763 23577999999999999999999999865533222222111100
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ..+..++..+.++|.+||..+|.+||++.++++
T Consensus 227 --~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 227 --TL-------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --CC-------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 011224456889999999999999999999875
No 224
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.9e-38 Score=300.18 Aligned_cols=237 Identities=24% Similarity=0.392 Sum_probs=183.1
Q ss_pred ccCcCCCeEEEEEEEcC-------------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceee
Q psy5603 177 KLGEGQFGTVYYGKLKN-------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR 243 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~-------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 243 (455)
.||+|+||.||+|+... ...||+|.+..... . ....|..|+.+++.++||||++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~------~-------~~~~~~~~~~~l~~l~hp~iv~ 68 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR------D-------ISLAFFETASMMRQVSHKHIVL 68 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh------h-------HHHHHHHHHHHHHhCCCCCEee
Confidence 58999999999998532 23588888753211 1 1345888999999999999999
Q ss_pred ecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc-
Q psy5603 244 LLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV- 321 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~- 321 (455)
+++++.+ ...++||||+++|+|..++.... .++++..++.++.|++.||+|||+ ++|+||||||+|||++.++.
T Consensus 69 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~ivH~dlkp~Nill~~~~~~ 144 (262)
T cd05077 69 LYGVCVRDVENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLED--KDLVHGNVCTKNILLAREGID 144 (262)
T ss_pred EEEEEecCCCCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhhh--CCeECCCCCcccEEEecCCcc
Confidence 9998877 77899999999999988876532 468999999999999999999999 88999999999999987664
Q ss_pred ------eEEeecccccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHH-cCCCCCCCCcchh
Q psy5603 322 ------PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELL-TGMKPIDDNNTIL 392 (455)
Q Consensus 322 ------~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~ell-tG~~p~~~~~~~~ 392 (455)
++++|||++...... ....|+..|+|||.+. ..++.++|||||||++|||+ +|..||.......
T Consensus 145 ~~~~~~~~l~d~g~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~ 217 (262)
T cd05077 145 GECGPFIKLSDPGIPITVLSR-------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE 217 (262)
T ss_pred CCCCceeEeCCCCCCccccCc-------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH
Confidence 899999987644321 2346888999999764 35788999999999999998 5888887654222
Q ss_pred hHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..... ...... . ......+.+|+.+||..||++||++.++++.|+
T Consensus 218 ~~~~~-~~~~~~----------~--~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 218 KERFY-EGQCML----------V--TPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred HHHHH-hcCccC----------C--CCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 11111 010000 0 011245788999999999999999999998763
No 225
>KOG0690|consensus
Probab=100.00 E-value=1.9e-39 Score=301.04 Aligned_cols=235 Identities=26% Similarity=0.396 Sum_probs=197.8
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
++||+|.||.|-+++-+ +++.+|+|++++....... ....-..|-++|.+++||.+..+--.++. ...
T Consensus 174 KvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakd----------EVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drl 243 (516)
T KOG0690|consen 174 KVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKD----------EVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRL 243 (516)
T ss_pred HHhcCCccceEEEEeecccCceeehhhhhhhheeehH----------HhhhhhhHHHHHHhccCcHHHHhhhhhccCceE
Confidence 88999999999999876 5899999999877653221 13335679999999999998887655555 899
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||..||.|+-.|.+. ..+++.....+...|+.||.|||+ ++||+||||.+|+|||++|++||.|||+|+..
T Consensus 244 CFVMeyanGGeLf~HLsre---r~FsE~RtRFYGaEIvsAL~YLHs--~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~ 318 (516)
T KOG0690|consen 244 CFVMEYANGGELFFHLSRE---RVFSEDRTRFYGAEIVSALGYLHS--RNIVYRDLKLENLLLDKDGHIKITDFGLCKEE 318 (516)
T ss_pred EEEEEEccCceEeeehhhh---hcccchhhhhhhHHHHHHhhhhhh--CCeeeeechhhhheeccCCceEeeecccchhc
Confidence 9999999999999999874 359999999999999999999999 88999999999999999999999999999854
Q ss_pred ccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
-... ..+..++|||.|+|||++.. .+..++|+|.+|||+|||++|+.||...+.......+..++..++..+.+.
T Consensus 319 I~~g---~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~e- 394 (516)
T KOG0690|consen 319 IKYG---DTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPE- 394 (516)
T ss_pred cccc---ceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHH-
Confidence 4322 23567999999999998854 688999999999999999999999999887666666666666666555443
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCC
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
.+.|+...+..||++|.
T Consensus 395 -----------AktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 395 -----------AKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -----------HHHHHHHHhhcChHhhc
Confidence 67788899999999994
No 226
>KOG4250|consensus
Probab=100.00 E-value=7.5e-39 Score=324.09 Aligned_cols=265 Identities=25% Similarity=0.389 Sum_probs=205.5
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
...+.||+||||.||+|+.+ +|+.||||.++..... .......+|++++++++|+|||++++.-.+
T Consensus 16 ~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~------------r~~e~~~~EieilkKLnh~NIVk~f~iee~~ 83 (732)
T KOG4250|consen 16 EMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSL------------RPRERWCREIEILKKLNHPNIVKLFDIEETK 83 (732)
T ss_pred eehhhhcCCccceeeeecccccccchhHHhhhhhccc------------chHHHHHHHHHHHHHcCchhhhhhcccCCcc
Confidence 34478999999999999965 6999999999865421 124568899999999999999999986554
Q ss_pred ------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc--C--CC
Q psy5603 251 ------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD--E--NF 320 (455)
Q Consensus 251 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~--~--~~ 320 (455)
....+|||||+||||...|.+-++...|++.+.+.++..+..||.|||+ +||+||||||.||++- + .-
T Consensus 84 ~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE--n~IvHRDlKP~NIvl~~Gedgq~ 161 (732)
T KOG4250|consen 84 FLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE--NGIVHRDLKPGNIVLQIGEDGQS 161 (732)
T ss_pred ccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH--cCceeccCCCCcEEEeecCCCce
Confidence 3468999999999999999988888889999999999999999999999 8899999999999993 2 33
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHHcCCCCCCCCcch----hhH
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTI----LYY 394 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~----~~~ 394 (455)
..||+|||.|+....+.. ...+.||..|++||++. +.++.-+|.|||||++|+++||..||...... ...
T Consensus 162 IyKLtDfG~Arel~d~s~----~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~ 237 (732)
T KOG4250|consen 162 IYKLTDFGAARELDDNSL----FTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIM 237 (732)
T ss_pred EEeeecccccccCCCCCe----eeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhh
Confidence 689999999998776542 34679999999999775 56788999999999999999999999866532 122
Q ss_pred HHhhh-cccchhhccchhc-------cCC--C---hhHHHHHHHHHHHhhhccCcCCCC--CHHHHHHHHHhhhcC
Q psy5603 395 YLVVE-QEVPVREVLDKEA-------GEW--N---ETHVETLISIVFEKCCVFEKDKRA--SMRDIVDLLSKSVNN 455 (455)
Q Consensus 395 ~~~~~-~~~~~~~~~d~~~-------~~~--~---~~~~~~~l~~Li~~~l~~dp~~RP--s~~evl~~L~~~~~~ 455 (455)
+.+.. ....+.-...+.. ... + .......+...++.++..+|++|- ...++...+.+|+++
T Consensus 238 ~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 238 WHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred hhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 22211 1111110111000 000 1 123344566778899999999999 888888888888753
No 227
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-37 Score=304.51 Aligned_cols=246 Identities=27% Similarity=0.437 Sum_probs=195.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||+|... ++..||+|.+..... . ....+.+|+.+++.++|+||+++++++.
T Consensus 21 ~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~------~-------~~~~~~~e~~~l~~~~h~~v~~~~~~~~ 87 (296)
T cd06654 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ------P-------KKELIINEILVMRENKNPNIVNYLDSYL 87 (296)
T ss_pred ceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc------c-------hHHHHHHHHHHHHhCCCCCEeeEEEEEE
Confidence 4556688999999999999875 478999999864322 1 0344889999999999999999999776
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. ...|+||||+++++|.+++.. ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 88 ~~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~--~gi~H~dLkp~Nill~~~~~~kl~dfg 161 (296)
T cd06654 88 VGDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFG 161 (296)
T ss_pred eCCEEEEeecccCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEcCCCCEEECccc
Confidence 6 788999999999999999864 358999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|++.|+|||.+.+ ..+.++|+|||||++|+|++|..||.................+ .
T Consensus 162 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~--~- 235 (296)
T cd06654 162 FCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP--E- 235 (296)
T ss_pred cchhcccccc---ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCC--C-
Confidence 9875433211 1233578999999996644 5788999999999999999999999866532211111111100 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+..+...+.+++.+||..+|++||++.++++
T Consensus 236 ------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 236 ------LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred ------CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 0012234566889999999999999999999986
No 228
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.1e-38 Score=317.19 Aligned_cols=254 Identities=22% Similarity=0.264 Sum_probs=189.4
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||++.+. .++.||||++...... ......+.+|+.+++.++||||+++++++.
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 86 (355)
T cd07874 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQN-----------QTHAKRAYRELVLMKCVNHKNIISLLNVFT 86 (355)
T ss_pred ceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccC-----------hHHHHHHHHHHHHHHHhCCCchhceeeeee
Confidence 3455689999999999999876 4789999998643210 011345778999999999999999999764
Q ss_pred C-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...|+||||+. ++|.+.+.. .+++..+..++.|++.||.|||+ +||+||||||+|||++.++.+
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~--~givHrDikp~Nill~~~~~~ 158 (355)
T cd07874 87 PQKSLEEFQDVYLVMELMD-ANLCQVIQM-----ELDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTL 158 (355)
T ss_pred ccccccccceeEEEhhhhc-ccHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEECCCCCE
Confidence 3 34689999995 567777653 48899999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.+.......... -
T Consensus 159 kl~Dfg~~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (355)
T cd07874 159 KILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234 (355)
T ss_pred EEeeCcccccCCCcc----ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 999999998654321 1234578999999997654 578899999999999999999999987653221111110 0
Q ss_pred ccc-----------hhhccc---------------hhc---cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVP-----------VREVLD---------------KEA---GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~-----------~~~~~d---------------~~~---~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ ...+.+ ... ...........+.+||.+|+..||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~ 310 (355)
T cd07874 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQ 310 (355)
T ss_pred CCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhc
Confidence 000 000000 000 00001123456789999999999999999999986
No 229
>KOG0574|consensus
Probab=100.00 E-value=3.2e-40 Score=303.23 Aligned_cols=241 Identities=24% Similarity=0.419 Sum_probs=200.3
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc-cccCcee
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG-LCNNIMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-~~~~~~~ 253 (455)
.+||+|+||.||++.++. |..||||++....+ .+.+..|+.|+.+|..|++|++|| |+....+
T Consensus 39 ~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sD---------------LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDL 103 (502)
T KOG0574|consen 39 GKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTD---------------LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDL 103 (502)
T ss_pred HHhcCCcchHHHHHHHhccCcEEEEEecCccch---------------HHHHHHHHHHHHHcCCchhhhhhhhhccCCce
Confidence 789999999999999874 89999999975543 566889999999999999999999 5566999
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++|||||..||..|.++.. ..++++..+..++...+.||+|||. ..-||||||..||||+.+|.+||+|||.|-..
T Consensus 104 WIVMEYCGAGSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~--~~KIHRDIKAGNILLNT~G~AKLADFGVAGQL 179 (502)
T KOG0574|consen 104 WIVMEYCGAGSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHD--LKKIHRDIKAGNILLNTDGIAKLADFGVAGQL 179 (502)
T ss_pred EeehhhcCCCcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHH--HHHHHhhcccccEEEcccchhhhhhccccchh
Confidence 9999999999999998764 4589999999999999999999999 45799999999999999999999999987644
Q ss_pred ccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
... -...+.+.||+-|||||++.. +|+.++||||||++..||..|++||.+.....-...+- ..+.+
T Consensus 180 TDT---MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP--T~PPP------- 247 (502)
T KOG0574|consen 180 TDT---MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP--TKPPP------- 247 (502)
T ss_pred hhh---HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc--CCCCC-------
Confidence 332 123467899999999997754 78999999999999999999999998765322111111 11111
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.-..+..++..+.+++++||...|++|.++.++++
T Consensus 248 TF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 248 TFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 12235677888999999999999999999999876
No 230
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.2e-37 Score=296.34 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=196.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||+|..+ ++..||+|.+........ .......+.+|++++++++|+||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~--------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 73 (258)
T cd06632 2 WRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQT--------GQEAVKQLEQEIALLSKLQHPNIVQYLGTERE 73 (258)
T ss_pred ccccceeeecCCceEEEEEEcCCCcEEEEEEEEEcccccc--------chHHHHHHHHHHHHHHhcCCCCchheeeeEec
Confidence 445688999999999999987 689999999865332111 01124568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++... .++++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~~~ni~~~~~~~~kl~d~~~ 148 (258)
T cd06632 74 EDNLYIFLELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHD--RNTVHRDIKGANILVDTNGVVKLADFGM 148 (258)
T ss_pred CCeEEEEEEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCcc
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-C-CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-Q-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~-~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+....... ......|+..|+|||.+.. . ++.++|+||||+++|+|++|..||............... .....
T Consensus 149 ~~~~~~~~----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~- 222 (258)
T cd06632 149 AKQVVEFS----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRS-KELPP- 222 (258)
T ss_pred ceeccccc----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhc-ccCCC-
Confidence 87654322 1234578999999996543 4 788999999999999999999999876532222211110 01100
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+..++..+.+++.+||..+|.+||++.+++.
T Consensus 223 --------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 223 --------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred --------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 01223455788999999999999999999875
No 231
>KOG0033|consensus
Probab=100.00 E-value=3.7e-40 Score=295.22 Aligned_cols=248 Identities=24% Similarity=0.383 Sum_probs=200.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|.|+.||++... +|+.+|+|.+........ ..+.+.+|+.|.+.++||||+++......
T Consensus 13 y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~-----------~~e~l~rEarIC~~LqHP~IvrL~~ti~~ 81 (355)
T KOG0033|consen 13 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-----------DFQKLEREARICRKLQHPNIVRLHDSIQE 81 (355)
T ss_pred hhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc-----------cHHHHHHHHHHHHhcCCCcEeehhhhhcc
Confidence 344478999999999999765 589999999875543222 14558899999999999999999996655
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc---CCCceEEee
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLGD 326 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~---~~~~~kl~D 326 (455)
+..|+|+|+|.|++|..-+-.. ...++..+...+.||+.+|.|+|. ++|||||+||.|+||. ...-+||+|
T Consensus 82 ~~~~ylvFe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~--n~IvHRDvkP~nllLASK~~~A~vKL~~ 156 (355)
T KOG0033|consen 82 ESFHYLVFDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHS--NGIVHRDLKPENLLLASKAKGAAVKLAD 156 (355)
T ss_pred cceeEEEEecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHh--cCceeccCChhheeeeeccCCCceeecc
Confidence 8999999999999997666542 357888999999999999999999 8899999999999994 445799999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
||+|....... ..-...|||.|||||++. ..++..+||||.|||||-||.|.+||.+.++...+..+.....++.
T Consensus 157 FGvAi~l~~g~----~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~ 232 (355)
T KOG0033|consen 157 FGLAIEVNDGE----AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYP 232 (355)
T ss_pred cceEEEeCCcc----ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCC
Confidence 99998776332 133578999999999765 4688999999999999999999999999776666655544332221
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...| +.+....++|+.+||..||.+|.|+.|.++
T Consensus 233 ------~~~w--~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 233 ------SPEW--DTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred ------Cccc--CcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 1122 345566899999999999999999999864
No 232
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=9.2e-38 Score=297.54 Aligned_cols=237 Identities=27% Similarity=0.413 Sum_probs=186.0
Q ss_pred CccCcCCCeEEEEEEEcCCc-----------EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeee
Q psy5603 176 NKLGEGQFGTVYYGKLKNGM-----------EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~-----------~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
+.||+|+||.||+|.+.+.. .|++|.+..... ....|.+|+.++++++||||+++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--------------~~~~~~~e~~~l~~l~h~~i~~~ 66 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR--------------DSLAFFETASLMSQLSHKHLVKL 66 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh--------------hHHHHHHHHHHHHcCCCcchhhe
Confidence 36999999999999986422 477887653221 03458899999999999999999
Q ss_pred cccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC----
Q psy5603 245 LGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF---- 320 (455)
Q Consensus 245 ~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~---- 320 (455)
++++.....++||||+++|+|.+++..... .+++..+..++.|++.||.|||+ ++|+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dlkp~Nill~~~~~~~~ 142 (259)
T cd05037 67 YGVCVRDENIMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLED--KKLVHGNVCGKNILVARYGLNEG 142 (259)
T ss_pred eeEEecCCcEEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhh--CCeecccCccceEEEecCccccC
Confidence 998876778999999999999999987432 68999999999999999999999 8899999999999999888
Q ss_pred ---ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhh
Q psy5603 321 ---VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLT-GMKPIDDNNTILY 393 (455)
Q Consensus 321 ---~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~ 393 (455)
.+||+|||++..... .....++..|+|||++.+ .++.++|+|||||++|||++ |..||...+....
T Consensus 143 ~~~~~kl~Dfg~a~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~ 215 (259)
T cd05037 143 YVPFIKLSDPGIPITVLS-------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEK 215 (259)
T ss_pred CceeEEeCCCCccccccc-------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhH
Confidence 899999999875433 123457788999997754 47889999999999999999 6888876542211
Q ss_pred HHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 394 YYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 394 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
..... .....+ .+ ....+.+++.+|+..+|.+||++.+|++.|+
T Consensus 216 ~~~~~-~~~~~~---------~~---~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 216 ERFYQ-DQHRLP---------MP---DCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred HHHHh-cCCCCC---------CC---CchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111 000000 00 0145788999999999999999999998874
No 233
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4.8e-38 Score=304.56 Aligned_cols=255 Identities=24% Similarity=0.313 Sum_probs=195.0
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||+||++.+. +|+.||+|++..... ......+.+|+++++.++||||+++++++.+
T Consensus 8 ~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 75 (284)
T cd06620 8 ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK------------SSVRKQILRELQIMHECRSPYIVSFYGAFLNE 75 (284)
T ss_pred HHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc------------chHHHHHHHHHHHHHHcCCCCcceEeeeEecC
Confidence 44588999999999999976 478999999864321 0114568899999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|.+++.. ..++++..+..++.+++.||.|||+. ++++||||||+||++++++.++|+|||++
T Consensus 76 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~d~gl~ 151 (284)
T cd06620 76 NNICMCMEFMDCGSLDRIYKK---GGPIPVEILGKIAVAVVEGLTYLYNV-HRIMHRDIKPSNILVNSRGQIKLCDFGVS 151 (284)
T ss_pred CEEEEEEecCCCCCHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHh-cCeeccCCCHHHEEECCCCcEEEccCCcc
Confidence 888999999999999998876 34689999999999999999999962 47999999999999999999999999987
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc-ccchhhcc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVREVL 408 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~~~ 408 (455)
....... .....|+..|+|||.+ .+.++.++|+|||||++|+++||..||............... ...+....
T Consensus 152 ~~~~~~~-----~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd06620 152 GELINSI-----ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV 226 (284)
T ss_pred cchhhhc-----cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh
Confidence 6542221 2345789999999965 456788999999999999999999999865431000000000 00000111
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.......+...++..+.+|+.+|+..+|.+||++.||++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 227 QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111111222355668899999999999999999999874
No 234
>KOG1094|consensus
Probab=100.00 E-value=1.4e-38 Score=314.46 Aligned_cols=262 Identities=27% Similarity=0.369 Sum_probs=207.0
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
.++++||+|-||.|.++...++..||||+++..+.. .....|..|+++|.+|+||||++++|.|.. +
T Consensus 541 ~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~------------~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De 608 (807)
T KOG1094|consen 541 RFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATK------------NARNDFLKEIKILSRLKHPNIVELLGVCVQDD 608 (807)
T ss_pred ehhhhhcCcccceeEEEEecCceEEEEeecCcccch------------hHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence 467999999999999999987799999999865431 125669999999999999999999999976 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.+|+|+|||++|+|.+++....- +.+.-....+|+.||+.|++||.+ -++|||||.+.|+|+|.++++||+|||++|
T Consensus 609 PicmI~EYmEnGDLnqFl~ahea-pt~~t~~~vsi~tqiasgmaYLes--~nfVHrd~a~rNcLv~~e~~iKiadfgmsR 685 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHEL-PTAETAPGVSICTQIASGMAYLES--LNFVHRDLATRNCLVDGEFTIKIADFGMSR 685 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccC-cccccchhHHHHHHHHHHHHHHHh--hchhhccccccceeecCcccEEecCccccc
Confidence 88999999999999999988542 224556677899999999999999 679999999999999999999999999999
Q ss_pred ccccCCcceeeeccCCCCCCCCCcc-cccCCCCcccchHHHHHHHHHHHc--CCCCCCCCcchhhHHHhhh-cccchhhc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLT--GMKPIDDNNTILYYYLVVE-QEVPVREV 407 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~~~~sDv~SlGvvl~ellt--G~~p~~~~~~~~~~~~~~~-~~~~~~~~ 407 (455)
-....+... .....+-...|||+| ++.|+++++||+|+||+++||+++ ...||.............. -...-...
T Consensus 686 ~lysg~yy~-vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~ 764 (807)
T KOG1094|consen 686 NLYSGDYYR-VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV 764 (807)
T ss_pred ccccCCcee-eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce
Confidence 665544322 122344567899999 778999999999999999999876 8889987654333222211 01111111
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhcC
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
-...+.-++..+.+++..||..+.++||+++++...|.+...|
T Consensus 765 -----~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~~~ 807 (807)
T KOG1094|consen 765 -----VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDALN 807 (807)
T ss_pred -----eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhccC
Confidence 1122334555566888899999999999999999999876553
No 235
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.1e-38 Score=303.99 Aligned_cols=242 Identities=28% Similarity=0.373 Sum_probs=194.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.+. +++.||+|++....... ......+.+|+++++++.||||+++++++.+
T Consensus 3 y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (290)
T cd05580 3 FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVK----------LKQVEHVLNEKRILQSIRHPFLVNLYGSFQD 72 (290)
T ss_pred eEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh----------hhHHHHHHHHHHHHHhCCCCCccceeeEEEc
Confidence 455689999999999999986 47899999986432211 1114558899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++++|.+++... ..++...+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 73 ~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~--~~i~H~dl~p~nili~~~~~~kl~dfg~ 147 (290)
T cd05580 73 DSNLYLVMEYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHS--LDIVYRDLKPENLLLDSDGYIKITDFGF 147 (290)
T ss_pred CCeEEEEEecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEECCCCCEEEeeCCC
Confidence 7889999999999999999874 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+...... .....|++.|+|||.+. +..+.++|+||||+++|+|++|..||..................++.
T Consensus 148 ~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-- 219 (290)
T cd05580 148 AKRVKGR------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS-- 219 (290)
T ss_pred ccccCCC------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc--
Confidence 8765433 23457899999999654 45688999999999999999999999876633222222222212111
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIV 446 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl 446 (455)
..+..+.++|.+|+..+|.+|+ ++++++
T Consensus 220 ----------~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 220 ----------FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ----------cCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 1234578899999999999998 666665
No 236
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=8.3e-38 Score=301.67 Aligned_cols=237 Identities=25% Similarity=0.393 Sum_probs=182.3
Q ss_pred ccCcCCCeEEEEEEEcC-------------------------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHH
Q psy5603 177 KLGEGQFGTVYYGKLKN-------------------------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ 231 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~-------------------------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 231 (455)
+||+|+||.||+|.... ...||+|++..... .....|.+|+.
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-------------~~~~~~~~~~~ 68 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-------------DIALAFFETAS 68 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-------------HHHHHHHHHHH
Confidence 69999999999997521 13588888753211 11345888999
Q ss_pred HHhhCCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCC
Q psy5603 232 TLSQCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 232 ~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dik 310 (455)
++++++||||+++++++.+ ...++||||+++|+|.+++.... ..+++..+..++.|++.||+|||+ ++|+|||||
T Consensus 69 ~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~--~~iiH~dlk 144 (274)
T cd05076 69 LMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEK--GRVPVAWKITVAQQLASALSYLED--KNLVHGNVC 144 (274)
T ss_pred HHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHc--CCccCCCCC
Confidence 9999999999999999877 78899999999999999886532 368899999999999999999999 889999999
Q ss_pred CCcEEEcCCC-------ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHH-c
Q psy5603 311 SANVLLDENF-------VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELL-T 380 (455)
Q Consensus 311 p~NILl~~~~-------~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~ell-t 380 (455)
|+|||+++.+ .+|++|||++...... ....++..|+|||.+.+ .++.++|+|||||++||++ +
T Consensus 145 p~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~ 217 (274)
T cd05076 145 AKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFD 217 (274)
T ss_pred cccEEEeccCcccCccceeeecCCccccccccc-------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhC
Confidence 9999997654 4899999987543221 12357888999997643 4788999999999999994 7
Q ss_pred CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 381 GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 381 G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
|..||............. .....+. .....+.+++.+||..+|.+||++.+|++.|+
T Consensus 218 g~~p~~~~~~~~~~~~~~-~~~~~~~------------~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 218 GEVPLKERTPSEKERFYE-KKHRLPE------------PSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred CCCCccccChHHHHHHHH-hccCCCC------------CCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 999998665322211111 1111110 01224778899999999999999999998874
No 237
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5e-38 Score=303.73 Aligned_cols=246 Identities=24% Similarity=0.309 Sum_probs=188.0
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|.+. +++.||+|.+..... . .....+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~------~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 71 (279)
T cd06619 4 QYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDIT------V------ELQKQIMSELEILYKCDSPYIIGFYGAFFVE 71 (279)
T ss_pred hheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCC------h------HHHHHHHHHHHHHHhCCCCCeeeEEEEEEEC
Confidence 45588999999999999875 578999999864311 0 013458899999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+++++|..+. .+++..+..++.|++.||.|||+ .+++|+||||+|||++.++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 72 NRISICTEFMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWS--LKILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred CEEEEEEecCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHH--CCEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 7889999999999996542 37888999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .....||..|+|||.+. ..++.++|+||||+++|+|++|..||.............. ......+
T Consensus 143 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~---~~~~~~~ 214 (279)
T cd06619 143 TQLVNSI-----AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQ---LLQCIVD 214 (279)
T ss_pred eeccccc-----ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHH---HHHHHhc
Confidence 7543321 23458999999999664 4578899999999999999999999975331110000000 0000000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......+....+..+.+++.+|+..+|++||++.++++
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~ 252 (279)
T cd06619 215 EDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMD 252 (279)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 00111112223445788999999999999999999875
No 238
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-37 Score=301.91 Aligned_cols=250 Identities=23% Similarity=0.323 Sum_probs=194.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.++ ++..||+|.++.... . .....+.+|+.++++++||||+++++++..
T Consensus 3 ~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~------~------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 70 (286)
T cd06622 3 IEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELD------E------SKFNQIIMELDILHKAVSPYIVDFYGAFFI 70 (286)
T ss_pred hhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccC------H------HHHHHHHHHHHHHHhcCCCcHHhhhhheec
Confidence 455689999999999999987 589999999864211 0 013458899999999999999999997766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|..++........+++..+..++.+++.||.|||+. .+++||||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~-~~i~H~dl~p~nil~~~~~~~~l~dfg~ 149 (286)
T cd06622 71 EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE-HNIIHRDVKPTNVLVNGNGQVKLCDFGV 149 (286)
T ss_pred CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc-CCEeeCCCCHHHEEECCCCCEEEeecCC
Confidence 88899999999999999887643334689999999999999999999962 4799999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccCC-------CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-------ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+....... .....|+..|+|||.+.+. ++.++|+|||||++|+|++|..||..............
T Consensus 150 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~--- 221 (286)
T cd06622 150 SGNLVASL-----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSA--- 221 (286)
T ss_pred cccccCCc-----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHH---
Confidence 87543221 2334688899999976432 47799999999999999999999976543221111110
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...... +..++..+.++|.+|+..+|.+||++.++++
T Consensus 222 ----~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 222 ----IVDGDPPTL-PSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred ----HhhcCCCCC-CcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 000000011 1225566888999999999999999999976
No 239
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.6e-37 Score=298.54 Aligned_cols=261 Identities=26% Similarity=0.434 Sum_probs=197.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... +|+.||+|.++........... ........+.+|+.++++++|||++++++++..
T Consensus 3 ~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 79 (272)
T cd06629 3 WVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDS---RQKDMVKALRSEIETLKDLDHLNIVQYLGFETT 79 (272)
T ss_pred eeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccch---HHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc
Confidence 445689999999999999875 4889999998643221111100 111224568889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++... .++++..+..++.|++.||.|||+ ++++||||+|+||+++.++.++|+|||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHS--KGILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhh--CCeeecCCChhhEEEcCCCeEEEeeccc
Confidence 7889999999999999999864 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++...... .........|+..|+|||.+.. .++.++|+||||+++|++++|..||................ ...
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~ 231 (272)
T cd06629 155 SKKSDDIY-DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKR--SAP 231 (272)
T ss_pred cccccccc-cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccc--cCC
Confidence 87643321 1111234578899999997643 26889999999999999999999997654322221111110 000
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+... ....++..+.+++.+||..+|.+||++.+|++
T Consensus 232 ~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 232 PIPPD----VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00110 11234566888999999999999999999875
No 240
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-37 Score=301.21 Aligned_cols=257 Identities=22% Similarity=0.331 Sum_probs=194.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++...||+|+||.||+|.++ +|+.||+|++........ ..+.+.+|+.++++++|||++++++++..
T Consensus 3 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~-----------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 71 (286)
T cd07847 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPV-----------IKKIALREIRMLKQLKHPNLVNLIEVFRR 71 (286)
T ss_pred eeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCcc-----------ccHHHHHHHHHHHhCCCCCEeeeeeEEee
Confidence 455689999999999999987 488999999864322110 12347899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|..++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~~v~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 72 KRKLHLVFEYCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHK--HNCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred CCEEEEEEeccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCChhhEEEcCCCcEEECcccc
Confidence 788999999999888877654 3358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchh-
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR- 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~- 405 (455)
+........ ......++..|+|||.+.+ .++.++|+||||+++|||++|.+||.+............ ......
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07847 147 ARILTGPGD---DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPR 223 (286)
T ss_pred ceecCCCcc---cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 886543321 1223467889999997643 468899999999999999999999987653222211111 000000
Q ss_pred --hccc----------hhccCC-C----hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 --EVLD----------KEAGEW-N----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 --~~~d----------~~~~~~-~----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+ +..... + ...++..+.+|+.+|+..+|++||++.|++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 224 HQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred HhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000 000000 0 1123556889999999999999999999874
No 241
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.2e-37 Score=301.60 Aligned_cols=260 Identities=24% Similarity=0.342 Sum_probs=197.3
Q ss_pred eHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHH
Q psy5603 155 TFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 155 ~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
.+..+..++++|... +.||+|+||.||+|.++ +++.||+|++..... . ...+.+|+.++
T Consensus 9 ~~~~~~~~~~~~~~~------~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~------~--------~~~~~~e~~~l 68 (286)
T cd06638 9 IFDSFPDPSDTWEII------ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD------I--------DEEIEAEYNIL 68 (286)
T ss_pred EeecCCCcccceeee------eeeccCCCcEEEEEEECCCCceeEEEeeccccc------h--------HHHHHHHHHHH
Confidence 344555566666544 89999999999999986 478999998753211 0 23477899999
Q ss_pred hhC-Cccceeeeccccc-----C-ceeEEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCee
Q psy5603 234 SQC-KHVNLLRLLGLCN-----N-IMNCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 234 ~~l-~h~niv~l~~~~~-----~-~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ii 305 (455)
+++ +||||+++++++. + ...++||||+++++|.+++... .....+++..+..++.|++.||.|||+ .+++
T Consensus 69 ~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~--~~i~ 146 (286)
T cd06638 69 KALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHV--NKTI 146 (286)
T ss_pred HHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHh--CCcc
Confidence 999 6999999999762 2 5679999999999999987642 224568999999999999999999999 8899
Q ss_pred ecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHH
Q psy5603 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELL 379 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~ell 379 (455)
||||||+||+++.++.+||+|||+++....... ......|++.|+|||++. ..++.++|||||||++|||+
T Consensus 147 H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~ 223 (286)
T cd06638 147 HRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELG 223 (286)
T ss_pred ccCCCHHhEEECCCCCEEEccCCceeecccCCC---ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHh
Confidence 999999999999999999999999876543221 123357899999999763 23678999999999999999
Q ss_pred cCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 380 TGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 380 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
+|..||............... ..... ..+..++..+.+++.+||..+|++||++.++++.
T Consensus 224 ~g~~p~~~~~~~~~~~~~~~~--~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 224 DGDPPLADLHPMRALFKIPRN--PPPTL-------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cCCCCCCCCchhHHHhhcccc--CCCcc-------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 999999865432211111100 00000 0111234458889999999999999999999864
No 242
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2.1e-37 Score=298.26 Aligned_cols=245 Identities=27% Similarity=0.384 Sum_probs=195.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.+. +++.||+|.+...... . ....+.+|+++++.++|+||+++++++.+
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 70 (274)
T cd06609 3 FTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE-----D-------EIEDIQQEIQFLSQCRSPYITKYYGSFLK 70 (274)
T ss_pred hhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc-----h-------HHHHHHHHHHHHHHcCCCCeeeeeEEEEE
Confidence 445588999999999999976 4889999998643210 1 13457899999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+|+||+++++|.+++... ++++..+..++.|++.|+.|||+ ++++||||+|+||++++++.++|+|||+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~ 144 (274)
T cd06609 71 GSKLWIIMEYCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHE--EGKIHRDIKAANILLSEEGDVKLADFGV 144 (274)
T ss_pred CCeEEEEEEeeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEccccc
Confidence 7889999999999999998752 78999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
++...... .......|+..|+|||.+. ..++.++|+||||+++|+|+||..||...+.......+.... .+.
T Consensus 145 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~-- 217 (274)
T cd06609 145 SGQLTSTM---SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PPS-- 217 (274)
T ss_pred ceeecccc---cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CCC--
Confidence 88765432 1123457889999999664 457899999999999999999999998665332222111110 000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+++.+||..+|++||++.++++
T Consensus 218 ------~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 218 ------LEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ------CcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 001114455888999999999999999999975
No 243
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.4e-38 Score=314.60 Aligned_cols=186 Identities=25% Similarity=0.378 Sum_probs=156.1
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+. +..||+|+.... ....|+.++++++||||+++++++..
T Consensus 68 y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------------------~~~~E~~~l~~l~h~~iv~~~~~~~~ 128 (357)
T PHA03209 68 YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------------------TTLIEAMLLQNVNHPSVIRMKDTLVS 128 (357)
T ss_pred cEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------------------ccHHHHHHHHhCCCCCCcChhheEEe
Confidence 4566999999999999999874 678999974321 13468999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+|+||+ .++|.+++... ..++++..+..|+.|++.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 129 ~~~~~lv~e~~-~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivHrDlkp~Nill~~~~~~kl~DfG~ 203 (357)
T PHA03209 129 GAITCMVLPHY-SSDLYTYLTKR--SRPLPIDQALIIEKQILEGLRYLHA--QRIIHRDVKTENIFINDVDQVCIGDLGA 203 (357)
T ss_pred CCeeEEEEEcc-CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEecCcc
Confidence 7789999999 57888888653 3468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCC
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPI 385 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~ 385 (455)
++...... ......||..|+|||++. ..++.++|||||||++|||+++..|+
T Consensus 204 a~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 204 AQFPVVAP----AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccCc----ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 87543221 123457999999999764 46789999999999999999855554
No 244
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=4.5e-38 Score=300.47 Aligned_cols=237 Identities=27% Similarity=0.377 Sum_probs=183.2
Q ss_pred ccCcCCCeEEEEEEEcC--------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 177 KLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
.||+|+||.||+|..+. ...||+|.+..... .....+.+|+.+++.+.||||+++++++
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~~~h~~iv~~~~~~ 68 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHR-------------NYSESFFEAASMMSQLSHKHLVLNYGVC 68 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhH-------------HHHHHHHHHHHHHHhCCCCChhheeeEE
Confidence 59999999999998642 23478888743211 1134588899999999999999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc------
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV------ 321 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~------ 321 (455)
.. ...++||||+++|+|.+++.... ..+++..++.++.|++.||.|||+ ++|+||||||+||+++.++.
T Consensus 69 ~~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~--~~iiH~dlkp~nili~~~~~~~~~~~ 144 (258)
T cd05078 69 VCGDESIMVQEYVKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLED--KGLTHGNVCAKNVLLIREEDRKTGNP 144 (258)
T ss_pred EeCCCcEEEEecCCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCccceEEEecccccccCCC
Confidence 76 78899999999999999997643 368999999999999999999999 88999999999999987765
Q ss_pred --eEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCC-CCCCCCcchhhHHH
Q psy5603 322 --PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGM-KPIDDNNTILYYYL 396 (455)
Q Consensus 322 --~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~-~p~~~~~~~~~~~~ 396 (455)
++++|||++..... .....++..|+|||.+.+ .++.++|||||||++|||++|. +|+...........
T Consensus 145 ~~~~l~d~g~~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~ 217 (258)
T cd05078 145 PFIKLSDPGISITVLP-------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQF 217 (258)
T ss_pred ceEEecccccccccCC-------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHH
Confidence 58999998764332 223568889999997754 4688999999999999999984 66654433221111
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
......++ ......+.+++.+||..+|++||+++++++.|+
T Consensus 218 -~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 218 -YEDRHQLP------------APKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -HHccccCC------------CCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 11111111 112234788999999999999999999998874
No 245
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2e-37 Score=296.37 Aligned_cols=256 Identities=25% Similarity=0.373 Sum_probs=198.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||+||+|... ++..+|+|++....... ....+.+|+++++.++|+||+++++.+..
T Consensus 3 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (267)
T cd06610 3 YELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT------------SVDELRKEVQAMSQCNHPNVVKYYTSFVV 70 (267)
T ss_pred ceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch------------HHHHHHHHHHHHHhcCCCCEEEEEEEEee
Confidence 456689999999999999975 47889999986432210 14568899999999999999999997766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+|++++++|.+++........+++..+..++.|++.||.|||+ .|++||||||+||++++++.++|+|||+
T Consensus 71 ~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~--~~i~h~~l~p~ni~~~~~~~~~l~df~~ 148 (267)
T cd06610 71 GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHS--NGQIHRDIKAGNILLGEDGSVKIADFGV 148 (267)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEEEcccch
Confidence 7889999999999999999764333468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcce-eeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 330 VKMSETSNMKT-MYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 330 a~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+.......... .......|+..|+|||.+.. ..+.++|+|||||++|+|++|..||..................
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 225 (267)
T cd06610 149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPP--- 225 (267)
T ss_pred HHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCC---
Confidence 87665433211 11234578999999996643 4788999999999999999999999866533222211111100
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... .......++..+.+++.+|+..+|++||++.++++
T Consensus 226 ~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 226 SLE---TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CcC---CccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000 00011245566889999999999999999999875
No 246
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=3.5e-37 Score=302.07 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=200.3
Q ss_pred HHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC
Q psy5603 159 LERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK 237 (455)
Q Consensus 159 l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 237 (455)
+.+..+..+....|...+.||+|+||.||+|... +++.||+|++....... ......+.+|+.+++.++
T Consensus 4 ~~~~~~~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~----------~~~~~~~~~Ei~~l~~l~ 73 (307)
T cd06607 4 IAELFSKDDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQS----------NEKWQDIIKEVRFLQQLR 73 (307)
T ss_pred HHHhhcCCCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCc----------HHHHHHHHHHHHHHHhCC
Confidence 4444555556666777799999999999999976 48899999986432211 011345889999999999
Q ss_pred ccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE
Q psy5603 238 HVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 238 h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl 316 (455)
||||+++++++.+ ...++|+||+. |+|.+.+.... .++++..+..++.|++.||.|||+ .+++||||+|+||++
T Consensus 74 h~niv~~~~~~~~~~~~~lv~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~--~~i~H~dl~p~nIl~ 148 (307)
T cd06607 74 HPNTIEYKGCYLREHTAWLVMEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHS--HERIHRDIKAGNILL 148 (307)
T ss_pred CCCEEEEEEEEEeCCeEEEEHHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcccEEE
Confidence 9999999998877 78899999996 67877776432 368999999999999999999999 889999999999999
Q ss_pred cCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc----CCCCcccchHHHHHHHHHHHcCCCCCCCCcchh
Q psy5603 317 DENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTIL 392 (455)
Q Consensus 317 ~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~ 392 (455)
+.++.+||+|||++...... ....|+..|+|||.+. +.++.++||||||+++|||+||..||...+...
T Consensus 149 ~~~~~~kL~dfg~~~~~~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~ 221 (307)
T cd06607 149 TEPGTVKLADFGSASLVSPA-------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 221 (307)
T ss_pred CCCCCEEEeecCcceecCCC-------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHH
Confidence 99999999999988754322 2346888999999652 457889999999999999999999998765332
Q ss_pred hHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 393 YYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 393 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......... ........++..+.++|.+||..+|++||++.+|+.
T Consensus 222 ~~~~~~~~~----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 222 ALYHIAQND----------SPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HHHHHhcCC----------CCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 222111111 011112234556899999999999999999999976
No 247
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.1e-37 Score=294.58 Aligned_cols=245 Identities=27% Similarity=0.415 Sum_probs=195.6
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+. +..||+|.+..... ...+.+|++++++++||||+++++++.+
T Consensus 5 y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------------~~~~~~e~~~~~~l~~~~i~~~~~~~~~ 69 (256)
T cd06612 5 FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---------------LQEIIKEISILKQCDSPYIVKYYGSYFK 69 (256)
T ss_pred chhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---------------HHHHHHHHHHHHhCCCCcEeeeeeeeec
Confidence 4555899999999999999875 78999999853211 3458999999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+++||+++++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 70 ~~~~~l~~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~ni~~~~~~~~~l~dfg~ 145 (256)
T cd06612 70 NTDLWIVMEYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLHS--NKKIHRDIKAGNILLNEEGQAKLADFGV 145 (256)
T ss_pred CCcEEEEEecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcceEEECCCCcEEEccccc
Confidence 78899999999999999987533 468999999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|+..|+|||.+.+ .++.++||||||+++|+|++|..||............... ...
T Consensus 146 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~--- 217 (256)
T cd06612 146 SGQLTDTMA---KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK--PPP--- 217 (256)
T ss_pred chhcccCcc---ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC--CCC---
Confidence 876543321 1234568899999997644 5788999999999999999999999865432211111100 000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+..++..+.+++.+||..+|++||++.+|++
T Consensus 218 ----~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 ----TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ----CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00112234556888999999999999999999975
No 248
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.9e-37 Score=298.54 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=195.7
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
++...||+|+||.||+|+.+. .+.||+|.+..... ......+.+|++++++++|+||+++++
T Consensus 8 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~------------~~~~~~~~~E~~~l~~l~h~~iv~~~~ 75 (275)
T cd05046 8 QEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKD------------ENLQSEFRRELDMFRKLSHKNVVRLLG 75 (275)
T ss_pred eeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccc------------hHHHHHHHHHHHHHHhcCCcceeeeEE
Confidence 344889999999999998642 45789998753211 011455889999999999999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCC------CCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNT------PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
++.+ ...|+||||+++|+|.+++...... .++++..+..++.|++.||+|||+ .+++||||||+||+++.+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dlkp~Nili~~~ 153 (275)
T cd05046 76 LCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN--ARFVHRDLAARNCLVSSQ 153 (275)
T ss_pred EECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh--cCcccCcCccceEEEeCC
Confidence 8877 7889999999999999999764422 268999999999999999999999 889999999999999999
Q ss_pred CceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHh
Q psy5603 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLV 397 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~ 397 (455)
+.++|+|||++........ .......++..|+|||.+ .+..+.++||||||+++|+|++ |..||............
T Consensus 154 ~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~ 231 (275)
T cd05046 154 REVKVSLLSLSKDVYNSEY--YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL 231 (275)
T ss_pred CcEEEcccccccccCcccc--cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHH
Confidence 9999999999875432221 112234567789999965 4567889999999999999999 88899765433222222
Q ss_pred hhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
........ ....++..+.+++.+||..+|.+||++.+++..|.+
T Consensus 232 ~~~~~~~~----------~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 232 QAGKLELP----------VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred HcCCcCCC----------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 11111110 112344568889999999999999999999998863
No 249
>KOG0584|consensus
Probab=100.00 E-value=9e-39 Score=319.85 Aligned_cols=245 Identities=25% Similarity=0.397 Sum_probs=197.6
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+....||+|+|-+||+|.+. +|-.||-=.++..... ......++|..|+.+|+.|+||||+++|.++.+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~---------q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT---------QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhh---------cChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 44578999999999999986 3777764333221111 111125789999999999999999999998866
Q ss_pred c--eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-CCceEEeec
Q psy5603 251 I--MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDF 327 (455)
Q Consensus 251 ~--~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~DF 327 (455)
. ..-+|.|.+..|+|..|+.+.+ ..+...+..|++||++||.|||+...+|||||||.+||+|+. .|.+||+|+
T Consensus 114 ~n~~in~iTEL~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDL 190 (632)
T KOG0584|consen 114 DNKTINFITELFTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDL 190 (632)
T ss_pred CCceeeeeeecccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecch
Confidence 3 4568999999999999999855 488899999999999999999998889999999999999974 599999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccCCCCcccchHHHHHHHHHHHcCCCCCCCCcch-hhHHHhhh--cccch
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVE--QEVPV 404 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~-~~~~~~~~--~~~~~ 404 (455)
|||....... ...+.|||.|||||++...|+..+||||||+.++||.|+..||.+.... ..+.++.. .+..+
T Consensus 191 GLAtl~r~s~-----aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl 265 (632)
T KOG0584|consen 191 GLATLLRKSH-----AKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAAL 265 (632)
T ss_pred hHHHHhhccc-----cceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHh
Confidence 9998766543 2347999999999999989999999999999999999999999988743 44433332 22223
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+-|+. ++++|.+|+.. .+.||++.|+++
T Consensus 266 ~kV~dPe------------vr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 266 SKVKDPE------------VREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hccCCHH------------HHHHHHHHhcC-chhccCHHHHhh
Confidence 3333333 78889999999 999999999875
No 250
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.7e-37 Score=295.48 Aligned_cols=249 Identities=24% Similarity=0.327 Sum_probs=198.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||.|+||.||.+... ++..|++|++....... .....+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 70 (256)
T cd08221 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-----------KERRDALNEIVILSLLQHPNIIAYYNHFMD 70 (256)
T ss_pred ceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-----------hHHHHHHHHHHHHHhCCCCCeeEEEeEEec
Confidence 455689999999999999865 47899999986432211 113458899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+
T Consensus 71 ~~~~~~~~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~ni~~~~~~~~kl~d~~~ 147 (256)
T cd08221 71 DNTLLIEMEYANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHK--AGILHRDIKTLNIFLTKAGLIKLGDFGI 147 (256)
T ss_pred CCeEEEEEEecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCccccCCChHhEEEeCCCCEEECcCcc
Confidence 78899999999999999997643 3468999999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|++.|+|||.+.+ ..+.++|+||||+++|||++|..||...........+...... .
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~--~-- 220 (256)
T cd08221 148 SKILGSEYS---MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYT--P-- 220 (256)
T ss_pred eEEcccccc---cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--C--
Confidence 876543321 2234578999999996644 5788999999999999999999999875543322222211110 0
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
....++..+.+++.+||..+|.+||++.++++.
T Consensus 221 -------~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 -------VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -------CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 012344568889999999999999999999864
No 251
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.3e-37 Score=293.42 Aligned_cols=249 Identities=24% Similarity=0.387 Sum_probs=196.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|... +++.+|+|.+...... ....+.+|++++++++||||+++++++.+
T Consensus 5 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-------------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 71 (262)
T cd06613 5 YELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-------------DFEIIQQEISMLKECRHPNIVAYFGSYLR 71 (262)
T ss_pred eEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-------------hHHHHHHHHHHHHhCCCCChhceEEEEEe
Confidence 455689999999999999976 4788999998643210 14558899999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|++|||+++++|.+++.... .++++.++..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 72 ~~~~~l~~e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~g~ 147 (262)
T cd06613 72 RDKLWIVMEYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLHE--TGKIHRDIKGANILLTEDGDVKLADFGV 147 (262)
T ss_pred CCEEEEEEeCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHh--CCceecCCChhhEEECCCCCEEECcccc
Confidence 78899999999999999887632 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+....... .......|+..|+|||.+.+ .++.++|+||||+++|||+||.+||....................
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T cd06613 148 SAQLTATI---AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP 224 (262)
T ss_pred chhhhhhh---hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc
Confidence 87544321 11234578889999997643 578899999999999999999999987653322222211111110
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ......++..+.+++.+|+..+|.+||++.+|+.
T Consensus 225 ~-------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 225 K-------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred c-------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 1112345566889999999999999999999874
No 252
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.1e-37 Score=336.34 Aligned_cols=251 Identities=22% Similarity=0.312 Sum_probs=192.6
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.++||+|+||+||+|.+.. +..||+|.+...... ......|..|+.++.+++|||||++++++.
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~-----------e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~ 82 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK-----------EREKSQLVIEVNVMRELKHKNIVRYIDRFL 82 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC-----------HHHHHHHHHHHHHHHHcCCCCcCeEEEEEE
Confidence 35667999999999999999874 678999998643221 011455889999999999999999999764
Q ss_pred C---ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCC-----CCeeecCCCCCcEEEcC--
Q psy5603 250 N---IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLS-----KPIIHRDVKSANVLLDE-- 318 (455)
Q Consensus 250 ~---~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~-----~~iiH~Dikp~NILl~~-- 318 (455)
+ ...|+||||+++|+|.++|.... ....+++..++.|+.||+.||.|||+.. ++||||||||+||||+.
T Consensus 83 de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~ 162 (1021)
T PTZ00266 83 NKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGI 162 (1021)
T ss_pred ecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCc
Confidence 3 56799999999999999987532 2356999999999999999999999842 35999999999999964
Q ss_pred ---------------CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHc
Q psy5603 319 ---------------NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLT 380 (455)
Q Consensus 319 ---------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~ellt 380 (455)
.+.+||+|||++....... ......||+.|+|||++.+ .++.++||||||||||||+|
T Consensus 163 ~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s----~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLT 238 (1021)
T PTZ00266 163 RHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES----MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238 (1021)
T ss_pred cccccccccccccCCCCceEEccCCccccccccc----cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHH
Confidence 3458999999987654322 1234579999999997633 47889999999999999999
Q ss_pred CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 381 GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 381 G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
|..||.................. .+....+..+.+||..||..+|.+||++.+++.
T Consensus 239 Gk~PF~~~~~~~qli~~lk~~p~-----------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 239 GKTPFHKANNFSQLISELKRGPD-----------LPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCCCCCcCCcHHHHHHHHhcCCC-----------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 99999865532211111111111 111123445888999999999999999999984
No 253
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.9e-37 Score=299.93 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=190.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++ +|..||+|+++....... ....+.+|++++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~-----------~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 70 (284)
T cd07839 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEG-----------VPSSALREICLLKELKHKNIVRLYDVLHS 70 (284)
T ss_pred ceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccccc-----------CccchhHHHHHHHhcCCCCeeeHHHHhcc
Confidence 455688999999999999986 488999999865322111 02337789999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+. ++|.+++.... ..+++..++.++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~--~~i~H~dl~~~nil~~~~~~~~l~dfg~ 145 (284)
T cd07839 71 DKKLTLVFEYCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCHS--HNVLHRDLKPQNLLINKNGELKLADFGL 145 (284)
T ss_pred CCceEEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCEecCCCCHHHEEEcCCCcEEECccch
Confidence 78899999996 68888876532 368999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhH-HHhhh--cccc-
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYY-YLVVE--QEVP- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~-~~~~~--~~~~- 403 (455)
++....... ......++..|+|||.+.+ .++.++|||||||++|||+||..|+......... ..+.. ....
T Consensus 146 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd07839 146 ARAFGIPVR---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTE 222 (284)
T ss_pred hhccCCCCC---CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCCh
Confidence 875433211 1223467889999997644 3588999999999999999998886543321111 11100 0000
Q ss_pred -----hhhccchhc-cCCC--------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -----VREVLDKEA-GEWN--------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -----~~~~~d~~~-~~~~--------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+....+... .... ...++..+.++|.+||..||.+|||++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 223 ESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000000 0000 1124566788999999999999999999875
No 254
>KOG0579|consensus
Probab=100.00 E-value=7.9e-39 Score=318.01 Aligned_cols=256 Identities=24% Similarity=0.380 Sum_probs=206.6
Q ss_pred hcCCCCCCCCcCCCccCcCCCeEEEEEEEcCC-cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccce
Q psy5603 163 TDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNG-MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 163 t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni 241 (455)
..+.++..+|++...||.|+||.||+|..++. -..|-|++..... .....|.-|++||..|.||+|
T Consensus 25 ~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse-------------EELEDylVEIeILa~CdHP~i 91 (1187)
T KOG0579|consen 25 YRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE-------------EELEDYLVEIEILAECDHPVI 91 (1187)
T ss_pred hccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch-------------hHHhhhhhhhhhhhcCCChHH
Confidence 44566666777888999999999999998753 3346777753321 114558899999999999999
Q ss_pred eeecc-cccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 242 LRLLG-LCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 242 v~l~~-~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
|++++ ||.++.++++.|||.||-....+-..++ +|.+.++..++++++.||.|||+ ++|||||||..|||++-+|
T Consensus 92 vkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r--~LtE~QIqvvc~q~ldALn~LHs--~~iIHRDLKAGNiL~TldG 167 (1187)
T KOG0579|consen 92 VKLLSAYYFENKLWILIEFCGGGAVDAIMLELGR--VLTEDQIQVVCYQVLDALNWLHS--QNIIHRDLKAGNILLTLDG 167 (1187)
T ss_pred HHHHHHHhccCceEEEEeecCCchHhHHHHHhcc--ccchHHHHHHHHHHHHHHHHHhh--cchhhhhccccceEEEecC
Confidence 99999 6677899999999999999888877654 79999999999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhH
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYY 394 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~ 394 (455)
.++|+|||.+-.... .......+.|||.|||||+.. ..|+.++|||||||+|.||..+.+|-...+...+.
T Consensus 168 dirLADFGVSAKn~~---t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl 244 (1187)
T KOG0579|consen 168 DIRLADFGVSAKNKS---TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL 244 (1187)
T ss_pred cEeeecccccccchh---HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH
Confidence 999999997643221 112345789999999999653 24788999999999999999999998877655544
Q ss_pred HHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 395 YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 395 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+.+ . ...+..++..+.+++..||..+|..||+++++++
T Consensus 245 lKiaKSePP--T-------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 245 LKIAKSEPP--T-------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHhhcCCC--c-------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 444432211 1 2334567788999999999999999999999875
No 255
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.6e-37 Score=300.07 Aligned_cols=247 Identities=26% Similarity=0.406 Sum_probs=195.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.++ ++..||+|.+..... . ....|.+|++++++++||||+++++++..
T Consensus 7 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (280)
T cd06611 7 WEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESE------E-------ELEDFMVEIDILSECKHPNIVGLYEAYFY 73 (280)
T ss_pred HHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCH------H-------HHHHHHHHHHHHHhCCCCceeEEEEEEec
Confidence 456689999999999999986 478999999863211 1 13458899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++++|.+++.... .++++..++.++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~--~~i~h~dl~p~nili~~~~~~~l~d~g~ 149 (280)
T cd06611 74 ENKLWILIEFCDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHS--HKVIHRDLKAGNILLTLDGDVKLADFGV 149 (280)
T ss_pred CCeEEEEeeccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEECCCCCEEEccCcc
Confidence 78899999999999999987643 369999999999999999999999 8899999999999999999999999998
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
+........ ......||..|+|||.+. ..++.++|+||||+++|||++|..||...+.............+
T Consensus 150 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 226 (280)
T cd06611 150 SAKNKSTLQ---KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPP 226 (280)
T ss_pred chhhccccc---ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCC
Confidence 765433221 123457899999999753 23577999999999999999999999876543322222111100
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. + ..+..++..+.+++.+|+..+|.+||++.++++
T Consensus 227 --~-~------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 227 --T-L------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred --C-c------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 0 0 011234456888999999999999999999975
No 256
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.3e-37 Score=299.41 Aligned_cols=257 Identities=21% Similarity=0.312 Sum_probs=192.0
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||.||+|+++ +|+.||||+++....... ....+.+|++++++++||||+++++++.+
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 71 (284)
T cd07860 3 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEG-----------VPSTAIREISLLKELNHPNIVKLLDVIHTE 71 (284)
T ss_pred eeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccc-----------cchHHHHHHHHHHhcCCCCCcchhhhcccC
Confidence 44588999999999999986 488999999864432111 12348899999999999999999998777
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 72 ~~~~~v~e~~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~--~~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 72 NKLYLVFEFLH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHS--HRVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred CcEEEEeeccc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEeeccch
Confidence 78899999995 68998887643 3468999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-C-CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchhhc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-Q-ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~-~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~~~ 407 (455)
........ ......++..|+|||.+.+ . ++.++|+||||+++|||+||..||.............. ...+....
T Consensus 148 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (284)
T cd07860 148 RAFGVPVR---TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 224 (284)
T ss_pred hhcccCcc---ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 75543211 1223457889999997644 3 57899999999999999999999987653222111111 10000000
Q ss_pred c---c------hhccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 L---D------KEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~---d------~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. . .....+. ...++..+.++|.+|+..||.+||++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 225 WPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred hhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0 0 0000000 0123445778999999999999999999874
No 257
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.6e-37 Score=301.80 Aligned_cols=260 Identities=25% Similarity=0.374 Sum_probs=198.4
Q ss_pred eeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHH
Q psy5603 154 FTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT 232 (455)
Q Consensus 154 ~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 232 (455)
++..++..++++|... +.||+|+||.||++..+ +++.+|+|.+..... ....+.+|+.+
T Consensus 12 ~~~~~~~~~~~~y~~~------~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~--------------~~~~~~~e~~~ 71 (291)
T cd06639 12 LGLESLGDPTDTWEII------ETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD--------------VDEEIEAEYNI 71 (291)
T ss_pred hhcccCCCCCCCeEEE------EEeecCCCeEEEEEEECCCCCEEEEEEeccccc--------------HHHHHHHHHHH
Confidence 3445555566666554 89999999999999986 488999999853211 12347789999
Q ss_pred HhhC-CccceeeecccccC------ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy5603 233 LSQC-KHVNLLRLLGLCNN------IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 233 l~~l-~h~niv~l~~~~~~------~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~i 304 (455)
+.++ +|||++++++++.. ...++|+||+++++|.+++.... ....+++..++.++.|++.||.|||+ .++
T Consensus 72 l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~--~~i 149 (291)
T cd06639 72 LQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHN--NRI 149 (291)
T ss_pred HHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHh--CCe
Confidence 9998 89999999997743 35799999999999999886422 23568999999999999999999999 889
Q ss_pred eecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC------CCCcccchHHHHHHHHHH
Q psy5603 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------QISTKTDVFSYGVILLEL 378 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~sDv~SlGvvl~el 378 (455)
+||||||+||+++.++.+||+|||+++....... ......|+..|+|||.+.. .++.++|+|||||++|||
T Consensus 150 vH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el 226 (291)
T cd06639 150 IHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIEL 226 (291)
T ss_pred eccCCCHHHEEEcCCCCEEEeecccchhcccccc---cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHH
Confidence 9999999999999999999999999876543221 1233578899999997643 257899999999999999
Q ss_pred HcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 379 LTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 379 ltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++|.+||............... ...... .+..+...+.++|.+||..+|++||++.++++
T Consensus 227 ~~g~~p~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 227 GDGDPPLFDMHPVKTLFKIPRN--PPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hhCCCCCCCCcHHHHHHHHhcC--CCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 9999999876532221111111 111111 11223456889999999999999999999875
No 258
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3e-37 Score=296.15 Aligned_cols=261 Identities=23% Similarity=0.325 Sum_probs=198.8
Q ss_pred cCCCccCcCCCeEEEEEEEcC--CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh-CCccceeeeccccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGLCN 249 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~ 249 (455)
.+.+.||+|+||.||+|.++. ++.+|+|.+........... .........+.+|+.++.+ ++||||+++++++.
T Consensus 3 ~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~---~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 79 (269)
T cd08528 3 AVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDK---RERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL 79 (269)
T ss_pred hhhhhhcCCCCceEEEEEEcCCCCceeeeeEeecccccccccc---ccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc
Confidence 445889999999999999864 67899999865432211100 0111224557789988865 79999999999776
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
+ +..++||||+++++|.+++... .....+++..++.++.|++.||.|||+. .+++||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~-~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 80 ENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE-KRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC-CceeecCCCHHHEEECCCCcEEEecc
Confidence 6 8889999999999999988542 2245689999999999999999999952 57999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|++....... ......|+..|+|||.+. +.++.++|+||||+++|||++|.+||..................
T Consensus 159 g~~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~--- 231 (269)
T cd08528 159 GLAKQKQPES----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE--- 231 (269)
T ss_pred cceeeccccc----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC---
Confidence 9988654332 223457899999999664 45788999999999999999999999766533222222111100
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
......++..+.+++.+||..||++||++.||..++++
T Consensus 232 -------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 232 -------PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred -------cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 00111234558889999999999999999999998864
No 259
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.7e-37 Score=299.24 Aligned_cols=246 Identities=27% Similarity=0.434 Sum_probs=195.2
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||.|+||.||+|.+. +++.||+|.+..... . ....+.+|+.+++.++||||+++++++.
T Consensus 20 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 86 (296)
T cd06655 20 KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ------P-------KKELIINEILVMKELKNPNIVNFLDSFL 86 (296)
T ss_pred eEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC------c-------hHHHHHHHHHHHHhcCCCceeeeeeeEe
Confidence 3556689999999999999875 588999999864221 1 1344789999999999999999999876
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...++|+||+++++|.+++.. ..+++.++..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 87 ~~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~--~~i~H~dL~p~Nili~~~~~~kl~dfg 160 (296)
T cd06655 87 VGDELFVVMEYLAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHA--NQVIHRDIKSDNVLLGMDGSVKLTDFG 160 (296)
T ss_pred cCceEEEEEEecCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccCc
Confidence 6 788999999999999998864 358999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++........ ......|+..|+|||.+. ..++.++|+|||||++|+|++|..||...+.............+ .
T Consensus 161 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~--~- 234 (296)
T cd06655 161 FCAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP--E- 234 (296)
T ss_pred cchhcccccc---cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc--c-
Confidence 9875443221 123457899999999664 45788999999999999999999999876543222111111100 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+..++..+.++|.+||..+|++||++.+++.
T Consensus 235 ------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 ------LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred ------cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0011234556888999999999999999999875
No 260
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=1.5e-37 Score=300.88 Aligned_cols=257 Identities=23% Similarity=0.358 Sum_probs=193.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|.++ +++.||+|++....... .....+.+|++++++++||||+++++++.+
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 71 (286)
T cd07846 3 YENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-----------MVKKIAMREIRMLKQLRHENLVNLIEVFRR 71 (286)
T ss_pred eeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-----------hhhHHHHHHHHHHHhcCCcchhhHHHhccc
Confidence 455689999999999999986 48899999986432211 013447889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+|+||+.+++|..+... ...+++.+++.++.|++.||.|||+ .+++||||+|+||++++++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 72 KKRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHS--HNIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred CCeEEEEEecCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEECCCCcEEEEeeee
Confidence 788999999999988887664 2358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV--- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~--- 404 (455)
+........ ......|+..|+|||.+.+ .++.++||||||+++|||++|.+||..................+
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07846 147 ARTLAAPGE---VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPR 223 (286)
T ss_pred eeeccCCcc---ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchh
Confidence 876543221 1223568899999997643 46789999999999999999999997655322211111100000
Q ss_pred -hhccc----------hhccC-----CChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 -REVLD----------KEAGE-----WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 -~~~~d----------~~~~~-----~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+ +.... .....++..+.+|+.+|+..+|++||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 224 HQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 00000 00000 001134566889999999999999999999875
No 261
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.8e-37 Score=299.65 Aligned_cols=265 Identities=24% Similarity=0.379 Sum_probs=197.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc-----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
+++.+.||+|+||.||+|.+. ++..||||.+...... .....|.+|+++++++.|+||+++++
T Consensus 6 ~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~------------~~~~~~~~ei~~l~~l~~~~i~~~~~ 73 (284)
T cd05038 6 LKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE------------QHRSDFEREIEILRTLDHENIVKYKG 73 (284)
T ss_pred chhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch------------HHHHHHHHHHHHHHhCCCCChheEEe
Confidence 345588999999999999864 3678999998643221 11456999999999999999999999
Q ss_pred cccC---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 247 LCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 247 ~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
++.. ...++||||+++++|.+++.... ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++.++
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~ 149 (284)
T cd05038 74 VCEKPGGRSLRLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGS--QRYIHRDLAARNILVESEDLVK 149 (284)
T ss_pred eeecCCCCceEEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHhEEEcCCCCEE
Confidence 7754 46799999999999999997643 258999999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cc
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
|+|||++.................++..|+|||.+ ...++.++|+||||+++|||+||..|+.............. ..
T Consensus 150 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 229 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQ 229 (284)
T ss_pred EcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcccccccccc
Confidence 99999998765332211112223456679999965 45678899999999999999999999865432111000000 00
Q ss_pred cc---hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 402 VP---VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 402 ~~---~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
.. +...+........+..++..+.+++.+||..+|++||++.+|+++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 230 MIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 00 0000011111111123345688899999999999999999999999876
No 262
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.2e-37 Score=298.32 Aligned_cols=258 Identities=23% Similarity=0.317 Sum_probs=195.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.+. +|+.||||++....... .....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 70 (286)
T cd07832 2 YKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-----------GIPNQALREIKALQACQHPYVVKLLDVFPH 70 (286)
T ss_pred ceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-----------hhhHHHHHHHHHHHhCCCCCCcceeeEEec
Confidence 456789999999999999986 58899999987543211 013458899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+ +++|.+++.... .++++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 71 ~~~~~~v~e~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~~~~~~~~~l~dfg~ 145 (286)
T cd07832 71 GSGFVLVMEYM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHA--NGIMHRDLKPANLLISADGVLKIADFGL 145 (286)
T ss_pred CCeeEEEeccc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCcCHHHEEEcCCCcEEEeeeee
Confidence 7889999999 999999987643 469999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cccc--
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP-- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~-- 403 (455)
+........ .......|+..|+|||.+.+ .++.++||||||+++|||+||.+||.............. ....
T Consensus 146 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T cd07832 146 ARLFSEEEP--RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEE 223 (286)
T ss_pred cccccCCCC--CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChH
Confidence 886544321 11234578999999997643 358899999999999999999888876553222111111 0000
Q ss_pred -hhhcc---c------hhcc--CCC--hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -VREVL---D------KEAG--EWN--ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -~~~~~---d------~~~~--~~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+++. + .... .+. ....+..+.++|.+|+..+|++||+++++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 224 TWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00000 0 0000 000 0123467888999999999999999999875
No 263
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.5e-37 Score=297.38 Aligned_cols=244 Identities=25% Similarity=0.411 Sum_probs=194.9
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
...++||.|+||.||+|.++ ++..||||.+..... ......+.+|+++++++.||||+++++++.+
T Consensus 7 ~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (277)
T cd06640 7 TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA------------EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKG 74 (277)
T ss_pred hhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc------------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEEC
Confidence 34488999999999999986 478999999863321 0114568899999999999999999998777
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||+++|+|.+++.. .++++.++..++.+++.||.|||+ .+++|+||+|+||+++.++.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~--~~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 75 TKLWIIMEYLGGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHS--EKKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred CEEEEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCccCcCCChhhEEEcCCCCEEEcccccc
Confidence 788999999999999998864 358999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......++..|+|||.+.+ ..+.++|+|||||++|||+||..||................
T Consensus 149 ~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-------- 217 (277)
T cd06640 149 GQLTDTQ---IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN-------- 217 (277)
T ss_pred eeccCCc---cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC--------
Confidence 7654322 11234568889999997644 57889999999999999999999998665332221111100
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.......++..+.+++.+|+..+|++||++.+++..
T Consensus 218 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 ---PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 011123455668899999999999999999999653
No 264
>KOG4279|consensus
Probab=100.00 E-value=1.9e-38 Score=318.18 Aligned_cols=243 Identities=27% Similarity=0.390 Sum_probs=196.4
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
-.||+|+||+||-|++.+ ...+|||.+..+.. .. .+-+..|+..-++++|.|||+++|.+.+ ++.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds------r~-------~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~ 647 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS------RE-------VQPLHEEIALHSTLRHKNIVRYLGSVSENGFF 647 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc------hh-------hccHHHHHHHHHHHhhHhHHHHhhccCCCCeE
Confidence 469999999999999875 45679999865432 11 2337789999999999999999998766 777
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCC--CHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc-CCCceEEeecccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPL--DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFGIV 330 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l--~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla 330 (455)
-+.||-++||||.++|...= +|+ ++...-.+..||++||.|||+ +.|||||||-+|||++ -.|.+||+|||-+
T Consensus 648 kIFMEqVPGGSLSsLLrskW--GPlKDNEstm~fYtkQILeGLkYLHe--n~IVHRDIKGDNVLvNTySGvlKISDFGTs 723 (1226)
T KOG4279|consen 648 KIFMEQVPGGSLSSLLRSKW--GPLKDNESTMNFYTKQILEGLKYLHE--NKIVHRDIKGDNVLVNTYSGVLKISDFGTS 723 (1226)
T ss_pred EEEeecCCCCcHHHHHHhcc--CCCccchhHHHHHHHHHHHHhhhhhh--cceeeccccCCcEEEeeccceEEecccccc
Confidence 89999999999999998743 466 888999999999999999999 7799999999999996 6799999999988
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-C--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-C--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+....- ...++++.||..|||||++. | +|+.++|||||||++.||.||++||.+.....-...... +
T Consensus 724 KRLAgi---nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG-------m 793 (1226)
T KOG4279|consen 724 KRLAGI---NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG-------M 793 (1226)
T ss_pred hhhccC---CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc-------c
Confidence 765543 34578899999999999874 3 578899999999999999999999987663221111100 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. +..+.-+..++...+.+|.+|+..+|.+||++++++.
T Consensus 794 y--KvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 794 Y--KVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred e--ecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 0 1112234667788999999999999999999999874
No 265
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.9e-37 Score=301.40 Aligned_cols=245 Identities=27% Similarity=0.437 Sum_probs=193.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... +++.||+|.+..... .. ...+.+|+.+++.++|+||+++++++..
T Consensus 21 y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~-------~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 87 (297)
T cd06656 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ------PK-------KELIINEILVMRENKNPNIVNYLDSYLV 87 (297)
T ss_pred ceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc------ch-------HHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 445589999999999999975 589999999864321 11 3447889999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+++++|.+++.. ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||+
T Consensus 88 ~~~~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~--~~i~H~dL~p~Nili~~~~~~~l~Dfg~ 161 (297)
T cd06656 88 GDELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGF 161 (297)
T ss_pred CCEEEEeecccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEECcCcc
Confidence 788999999999999999864 358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|++.|+|||.+. ..++.++|+|||||++|++++|..||...+.............+
T Consensus 162 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~----- 233 (297)
T cd06656 162 CAQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP----- 233 (297)
T ss_pred ceEccCCcc---CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCC-----
Confidence 876433221 123357889999999664 45788999999999999999999999765432111111100000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+...+..+.+++.+||..+|++||++.++++
T Consensus 234 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 234 ----ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ----CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00112334566888999999999999999999987
No 266
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.8e-37 Score=300.06 Aligned_cols=260 Identities=24% Similarity=0.329 Sum_probs=195.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|.++ +++.||||++.......... .....+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~--------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~ 73 (298)
T cd07841 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKD--------GINFTALREIKLLQELKHPNIIGLLDVFGH 73 (298)
T ss_pred ceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccc--------hhhHHHHHHHHHHhhcCCCCChhhhheeec
Confidence 345588999999999999976 48899999997544321111 113446789999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+ +|+|.+++.... ..+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||+|||+
T Consensus 74 ~~~~~lv~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nill~~~~~~~l~dfg~ 148 (298)
T cd07841 74 KSNINLVFEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHS--NWILHRDLKPNNLLIASDGVLKLADFGL 148 (298)
T ss_pred CCEEEEEEccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeecCCChhhEEEcCCCCEEEcccee
Confidence 7889999999 999999997633 369999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc-ccc---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVP--- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~--- 403 (455)
++....... ......++..|+|||.+.+ .++.++|+|||||++|||++|.+||............... ..+
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (298)
T cd07841 149 ARSFGSPNR---KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEE 225 (298)
T ss_pred eeeccCCCc---cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchh
Confidence 876544321 1223456888999997643 4688999999999999999998888765532211111110 000
Q ss_pred -------hhhccchhc-cCCC----hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -------VREVLDKEA-GEWN----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -------~~~~~d~~~-~~~~----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......... ...+ ....+..+.++|.+||..+|++||++.+|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 226 NWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred hhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000 0000 1223566888999999999999999999986
No 267
>KOG4257|consensus
Probab=100.00 E-value=6.5e-38 Score=311.43 Aligned_cols=252 Identities=26% Similarity=0.419 Sum_probs=205.4
Q ss_pred cCCCccCcCCCeEEEEEEEcC---C--cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN---G--MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGL 247 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~---~--~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 247 (455)
...++||+|-||.||+|.+.+ | -.||||+.+.+... ++ .+.|.+|.-++++++||||++++|.
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~-----d~-------tekflqEa~iMrnfdHphIikLIGv 459 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP-----DD-------TEKFLQEASIMRNFDHPHIIKLIGV 459 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh-----hh-------HHHHHHHHHHHHhCCCcchhheeee
Confidence 346889999999999998642 2 35899998754331 11 4559999999999999999999999
Q ss_pred ccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 248 CNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
|.+...++|||.++-|.|..+|.... ..++......++.||+.||.|||+ +.+|||||-..|||+...-.+||+||
T Consensus 460 ~~e~P~WivmEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeS--krfVHRDIAaRNiLVsSp~CVKLaDF 535 (974)
T KOG4257|consen 460 CVEQPMWIVMELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLES--KRFVHRDIAARNILVSSPQCVKLADF 535 (974)
T ss_pred eeccceeEEEecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHh--hchhhhhhhhhheeecCcceeeeccc
Confidence 99999999999999999999998754 368899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|++|......... .+...-...|||||.+ ..+++++||||-|||.+||+|. |..||.+-........+++
T Consensus 536 GLSR~~ed~~yYk--aS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEn------ 607 (974)
T KOG4257|consen 536 GLSRYLEDDAYYK--ASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIEN------ 607 (974)
T ss_pred chhhhccccchhh--ccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecC------
Confidence 9999887765432 2222234469999955 4589999999999999999998 9999987653322222222
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.-+...++.|+..+..|+.+||..+|.+||.++++...|++++
T Consensus 608 -----GeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 608 -----GERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred -----CCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 1122234456666778999999999999999999999998875
No 268
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=3.8e-37 Score=294.97 Aligned_cols=257 Identities=24% Similarity=0.377 Sum_probs=195.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+.++.||+|+||.||+|... +++.||+|++........ . .......+.+|+.++++++|+||+++++++.+
T Consensus 2 ~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~---~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 74 (268)
T cd06630 2 WLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSS---E----QEEVVEALRKEIRLMARLNHPHIIRMLGATCE 74 (268)
T ss_pred ccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCch---h----HHHHHHHHHHHHHHHHHcCCCceehhhceecc
Confidence 345589999999999999874 588999999864332111 0 01124568899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC-ceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFG 328 (455)
+..++|+||+++++|.+++.. ..++++..+..++.|++.||.|||+ +|++|+||||+||+++.++ .+||+|||
T Consensus 75 ~~~~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~ql~~al~~LH~--~~i~H~~i~~~nil~~~~~~~~~l~dfg 149 (268)
T cd06630 75 DSHFNLFVEWMAGGSVSHLLSK---YGAFKEAVIINYTEQLLRGLSYLHE--NQIIHRDVKGANLLIDSTGQRLRIADFG 149 (268)
T ss_pred CCeEEEEEeccCCCcHHHHHHH---hCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEcccc
Confidence 788999999999999999976 3468999999999999999999999 8899999999999998776 69999999
Q ss_pred cccccccCCcc-eeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 329 IVKMSETSNMK-TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++......... ........||..|+|||.+. ..++.++|+||+|+++|+|++|..||................
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----- 224 (268)
T cd06630 150 AAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIA----- 224 (268)
T ss_pred cccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHh-----
Confidence 98765433211 11123457899999999664 457889999999999999999999997544211111111000
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
........+...+..+.+++.+|+..+|.+||++.++++
T Consensus 225 --~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 225 --SATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --ccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 000001112235566888999999999999999999874
No 269
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.7e-37 Score=302.96 Aligned_cols=253 Identities=26% Similarity=0.351 Sum_probs=196.9
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.... ++.||+|.+....... ......+.+|++++++++|+||+++++.+.+
T Consensus 3 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (316)
T cd05574 3 FKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK----------RNKVKRVLTEQEILATLDHPFLPTLYASFQT 72 (316)
T ss_pred eEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch----------HHHHHHHHHHHHHHHhCCCCCchhheeeeec
Confidence 3455899999999999999864 8999999997543211 0114558899999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+.+++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||+
T Consensus 73 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dlkp~Nili~~~~~~~l~dfg~ 149 (316)
T cd05574 73 ETYLCLVMDYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLHL--LGIVYRDLKPENILLHESGHIMLSDFDL 149 (316)
T ss_pred CCEEEEEEEecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHHH--CCeeccCCChHHeEEcCCCCEEEeecch
Confidence 78899999999999999987532 3568999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcce--------------------------eeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCC
Q psy5603 330 VKMSETSNMKT--------------------------MYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 330 a~~~~~~~~~~--------------------------~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~ 382 (455)
+.......... .......||..|+|||.+. ..++.++||||||+++|+|++|.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCC
Confidence 87543221100 0112357899999999664 45788999999999999999999
Q ss_pred CCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC----HHHHHH
Q psy5603 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS----MRDIVD 447 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs----~~evl~ 447 (455)
.||...+................ .....+..+.+++.+|+..+|++||+ +.+++.
T Consensus 230 ~pf~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 230 TPFKGSNRDETFSNILKKEVTFP----------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CCCCCCchHHHHHHHhcCCccCC----------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 99987664332222221111111 11125567899999999999999999 666665
No 270
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.6e-37 Score=292.00 Aligned_cols=249 Identities=25% Similarity=0.360 Sum_probs=196.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||++... ++..||+|.+...... ......+.+|++++++++||||+++++++..
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (265)
T cd08217 2 YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT-----------EKEKQQLVSEVNILRELKHPNIVRYYDRIID 70 (265)
T ss_pred ceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC-----------HHHHHHHHHHHHHHHhcCCCccceeeeeeec
Confidence 445688999999999999875 4789999998643221 1114558889999999999999999996642
Q ss_pred ---ceeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHH-----cCCCCeeecCCCCCcEEEcCCCc
Q psy5603 251 ---IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLH-----SLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH-----~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
...+++|||+++++|.+++..... ..++++..++.++.+++.||.||| + .+++|+||||+||+++.++.
T Consensus 71 ~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~--~~i~h~dl~p~nili~~~~~ 148 (265)
T cd08217 71 RSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPG--NTVLHRDLKPANIFLDANNN 148 (265)
T ss_pred CCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCcccc--CcceecCCCHHHEEEecCCC
Confidence 567899999999999999976422 457999999999999999999999 6 78999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
+||+|||++........ ......|++.|+|||.+. ..++.++|+||||+++|+|++|..||...+.......+...
T Consensus 149 ~kl~d~g~~~~~~~~~~---~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 225 (265)
T cd08217 149 VKLGDFGLAKILGHDSS---FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG 225 (265)
T ss_pred EEEecccccccccCCcc---cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC
Confidence 99999999887654321 123457899999999764 45788999999999999999999999876532222221111
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ..+...+..+.+++.+|+..+|++||++.+|++
T Consensus 226 --~~~---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 226 --KFR---------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred --CCC---------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 100 111234556889999999999999999999986
No 271
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.5e-37 Score=299.77 Aligned_cols=241 Identities=28% Similarity=0.426 Sum_probs=191.5
Q ss_pred CCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.+.||+|+||.||+|.+. ++..||+|.+..... . .....+.+|++++++++||||+++++++.+ ..
T Consensus 9 ~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 76 (277)
T cd06642 9 LERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA------E------DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTK 76 (277)
T ss_pred HHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc------h------HHHHHHHHHHHHHHcCCCCccHhhhcccccCCc
Confidence 377999999999999876 478899998853321 0 114568899999999999999999998776 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+||||+++++|.+++.. .++++..+..++.+++.|+.|||+ ++++|+||+|+||++++++.++|+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~--~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~ 150 (277)
T cd06642 77 LWIIMEYLGGGSALDLLKP----GPLEETYIATILREILKGLDYLHS--ERKIHRDIKAANVLLSEQGDVKLADFGVAGQ 150 (277)
T ss_pred eEEEEEccCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhc--CCeeccCCChheEEEeCCCCEEEcccccccc
Confidence 8999999999999998864 358999999999999999999999 8899999999999999999999999999876
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
..... .......|+..|+|||.+.+ .++.++|+|||||++|||+||..||................ .
T Consensus 151 ~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~-------~-- 218 (277)
T cd06642 151 LTDTQ---IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS-------P-- 218 (277)
T ss_pred ccCcc---hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC-------C--
Confidence 54322 11233568899999997644 57889999999999999999999997554322211111000 0
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......++..+.+++.+|+..+|.+||++.+|++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 219 --PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred --CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 0011234456888999999999999999999987
No 272
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.1e-37 Score=302.14 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=195.4
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||++..+. ++.||+|.+...... .......+.+|+++++.++||||+++++.+..
T Consensus 4 ~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~----------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 73 (305)
T cd05609 4 ETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLI----------LRNQIQQVFVERDILTFAENPFVVSMFCSFETK 73 (305)
T ss_pred eEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhh----------hHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecC
Confidence 445899999999999999874 789999998643210 01113457899999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||++|++|.+++... .++++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~NIll~~~~~~~l~dfg~~ 148 (305)
T cd05609 74 RHLCMVMEYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHN--YGIVHRDLKPDNLLITSMGHIKLTDFGLS 148 (305)
T ss_pred CEEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCchHHEEECCCCCEEEeeCCCc
Confidence 7789999999999999999763 468999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcc------------eeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHh
Q psy5603 331 KMSETSNMK------------TMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 331 ~~~~~~~~~------------~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
+........ ........|+..|+|||.+ ...++.++|+|||||++|||++|..||.+..........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~ 228 (305)
T cd05609 149 KIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQV 228 (305)
T ss_pred cccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 742211100 0111234678899999965 456789999999999999999999999866533222222
Q ss_pred hhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
.......+ .....++..+.++|.+|+..+|++||+..++.+.|+.
T Consensus 229 ~~~~~~~~---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 229 ISDDIEWP---------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HhcccCCC---------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 21111110 0011244558899999999999999997777666654
No 273
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.9e-37 Score=299.80 Aligned_cols=244 Identities=26% Similarity=0.414 Sum_probs=192.0
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+....||+|+||.||+|... +++.||+|.+..... . ....+.+|+.++..++||||+++++++..
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~ 90 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ------Q-------RRELLFNEVVIMRDYQHQNVVEMYKSYLVG 90 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc------c-------hHHHHHHHHHHHHhCCCCchhhhhhheeeC
Confidence 33478999999999999876 488999999854321 0 13447889999999999999999997766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+|+||+++++|.+++.. ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 91 ~~~~iv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~--~~ivH~dl~p~Nill~~~~~~kL~dfg~~ 164 (297)
T cd06659 91 EELWVLMEFLQGGALTDIVSQ----TRLNEEQIATVCESVLQALCYLHS--QGVIHRDIKSDSILLTLDGRVKLSDFGFC 164 (297)
T ss_pred CeEEEEEecCCCCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHeEEccCCcEEEeechhH
Confidence 788999999999999987754 358999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....... .......|+..|+|||.+.+ .++.++|+|||||++|||++|..||.................. ..
T Consensus 165 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~-- 237 (297)
T cd06659 165 AQISKDV---PKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP--KL-- 237 (297)
T ss_pred hhccccc---ccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC--Cc--
Confidence 7543321 11234578999999997644 6788999999999999999999999865533222221111100 00
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....++..+.++|.+|+..+|++||++.++++
T Consensus 238 ~-----~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 238 K-----NAHKISPVLRDFLERMLTREPQERATAQELLD 270 (297)
T ss_pred c-----ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 0 01123445788999999999999999999987
No 274
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.3e-37 Score=297.29 Aligned_cols=257 Identities=24% Similarity=0.363 Sum_probs=195.6
Q ss_pred eHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHH
Q psy5603 155 TFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL 233 (455)
Q Consensus 155 ~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 233 (455)
++.++......|. +.+.||+|+||.||+|.+. +++.||+|.+..... ....+..|+.++
T Consensus 7 ~~~~~~~~~~~~~------~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~--------------~~~~~~~e~~~l 66 (282)
T cd06636 7 DLSALRDPAGIFE------LVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED--------------EEEEIKLEINML 66 (282)
T ss_pred hhhhhcChhhhhh------hheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH--------------HHHHHHHHHHHH
Confidence 3444444444443 3489999999999999985 478999999753211 133478899999
Q ss_pred hhC-Cccceeeeccccc-------CceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCee
Q psy5603 234 SQC-KHVNLLRLLGLCN-------NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPII 305 (455)
Q Consensus 234 ~~l-~h~niv~l~~~~~-------~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ii 305 (455)
+++ +|+||+++++++. ....|++|||+++|+|.+++.... ...+++..++.++.|++.||.|||+ .+++
T Consensus 67 ~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~--~~iv 143 (282)
T cd06636 67 KKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHA--HKVI 143 (282)
T ss_pred HHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcc
Confidence 998 6999999999773 256799999999999999987643 3458899999999999999999999 8899
Q ss_pred ecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHH
Q psy5603 306 HRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELL 379 (455)
Q Consensus 306 H~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~ell 379 (455)
|+||||+||++++++.++|+|||++....... .......|+..|+|||.+. ..++.++|+|||||++|||+
T Consensus 144 H~dl~~~nili~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~ 220 (282)
T cd06636 144 HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMA 220 (282)
T ss_pred cCCCCHHHEEECCCCCEEEeeCcchhhhhccc---cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHH
Confidence 99999999999999999999999987543221 1123457899999999653 24677999999999999999
Q ss_pred cCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 380 TGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 380 tG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+|..||............... . ........++..+.++|.+||..+|.+||++.|+++
T Consensus 221 ~g~~p~~~~~~~~~~~~~~~~--~--------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 221 EGAPPLCDMHPMRALFLIPRN--P--------PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred hCCCCccccCHHhhhhhHhhC--C--------CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 999999765432111111100 0 011112234556889999999999999999999864
No 275
>KOG4717|consensus
Probab=100.00 E-value=8.5e-38 Score=304.72 Aligned_cols=245 Identities=24% Similarity=0.354 Sum_probs=201.3
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|-|..|-+|++- +|..||||++.+.... ......+.+|++.++-++|||||++|.+...
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD-----------~~st~hlfqEVRCMKLVQHpNiVRLYEViDT 88 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLD-----------TLSTGHLFQEVRCMKLVQHPNIVRLYEVIDT 88 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccc-----------hhhhhHHHHHHHHHHHhcCcCeeeeeehhcc
Confidence 445588999999999999864 5999999999765431 2224557899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc-CCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-ENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~-~~~~~kl~DFG 328 (455)
..+|||+|.-.+|+|+|++.+++. .+++....+++.||+.||.|+|+ ..+|||||||+||.+. +-|-+||.|||
T Consensus 89 QTKlyLiLELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHq--LHVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 89 QTKLYLILELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQ--LHVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred cceEEEEEEecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhh--hhhhcccCCcceeEEeeecCceEeeecc
Confidence 788999999999999999988764 59999999999999999999999 6799999999999885 56899999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CC-CcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QI-STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~-~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
++..+..... -...+|+.+|-|||++.| .| .+++||||||||||.|.+|++||...+.....-.+
T Consensus 165 FSNkf~PG~k----L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmI--------- 231 (864)
T KOG4717|consen 165 FSNKFQPGKK----LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMI--------- 231 (864)
T ss_pred ccccCCCcch----hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhh---------
Confidence 9876554432 346799999999997766 45 46899999999999999999999876644332222
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+|-+ ..-+..++...++||..||..||++|.+.+++..
T Consensus 232 -mDCK--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 232 -MDCK--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -hccc--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 2222 1224567777899999999999999999999864
No 276
>KOG4278|consensus
Probab=100.00 E-value=5.9e-38 Score=311.30 Aligned_cols=250 Identities=28% Similarity=0.480 Sum_probs=207.6
Q ss_pred CCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 175 GNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
.++||-|.||.||.|.|+. .-.||||.++.+. +....|+.|..+++.++|||+|+++|+|.. ..
T Consensus 272 khKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt--------------MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpP 337 (1157)
T KOG4278|consen 272 KHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--------------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPP 337 (1157)
T ss_pred eeccCCCcccceeeeeeeccceeeehhhhhhcc--------------hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCC
Confidence 4889999999999999985 5789999997532 336779999999999999999999999987 67
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|||.|||+.|+|.++|++..+ ..++....+.++.||+.|+.||.. +++|||||-..|.|+.++..+||+||||+|+
T Consensus 338 FYIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEk--knFIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 338 FYIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEK--KNFIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred eEEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHH--hhhhhhhhhhhhccccccceEEeeccchhhh
Confidence 7999999999999999987654 457788889999999999999999 8999999999999999999999999999998
Q ss_pred cccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccch
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
...+.... .....-...|.|||-+ ...++.|||||+|||+|||+.| |..||.+.+...++...+.
T Consensus 415 MtgDTYTA--HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEk----------- 481 (1157)
T KOG4278|consen 415 MTGDTYTA--HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEK----------- 481 (1157)
T ss_pred hcCCceec--ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhc-----------
Confidence 76543211 1222334579999954 5578999999999999999999 9999998875554444332
Q ss_pred hccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 411 EAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
..+-..+..|+.-+..|+..||+..|.+||+++|+-+.|+.++.
T Consensus 482 gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 482 GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 11112234556667888999999999999999999999988764
No 277
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.2e-36 Score=292.48 Aligned_cols=255 Identities=23% Similarity=0.352 Sum_probs=193.3
Q ss_pred cCCCccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.++ ++..||||++...... ......+.+|++++++++||||+++++++
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 70 (273)
T cd05074 2 TLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFS-----------SSDIEEFLREAACMKEFDHPNVIKLIGVS 70 (273)
T ss_pred cchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCC-----------hHHHHHHHHHHHHHhcCCCCCcceEEEEE
Confidence 45588999999999999864 3678999998643211 01145588999999999999999999976
Q ss_pred cC-c------eeEEEEEeccCCCHHHHHhhcC---CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 249 NN-I------MNCIVYEYMCNGSLYDRLARVN---NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 249 ~~-~------~~~lV~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
.. . ..+++++|+.+|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dikp~nili~~ 148 (273)
T cd05074 71 LRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS--KNFIHRDLAARNCMLNE 148 (273)
T ss_pred ccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh--CCEeecccchhhEEEcC
Confidence 43 1 2378899999999998875322 12357899999999999999999999 88999999999999999
Q ss_pred CCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHH
Q psy5603 319 NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYL 396 (455)
Q Consensus 319 ~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~ 396 (455)
++.+||+|||+++........ .......++..|++||.+. +.++.++|||||||++|||++ |.+||...+.......
T Consensus 149 ~~~~kl~dfg~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~ 227 (273)
T cd05074 149 NMTVCVADFGLSKKIYSGDYY-RQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNY 227 (273)
T ss_pred CCCEEECcccccccccCCcce-ecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHH
Confidence 999999999998865432211 1112334567899999664 457889999999999999999 8999976654322221
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..... ... .....+..+.+++.+||..+|++||++.++++.|+++
T Consensus 228 ~~~~~-~~~----------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 228 LIKGN-RLK----------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HHcCC-cCC----------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111 000 0012334588899999999999999999999999876
No 278
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=5.3e-37 Score=295.75 Aligned_cols=245 Identities=27% Similarity=0.400 Sum_probs=193.3
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC---ccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK---HVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~ 247 (455)
|+..+.||+|+||.||+|.+. +++.||+|.++..... . ....+.+|+.++++++ |||+++++++
T Consensus 3 y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~-----~-------~~~~~~~e~~~l~~l~~~~~~~vi~~~~~ 70 (277)
T cd06917 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD-----D-------DVSDIQREVALLSQLRQSQPPNITKYYGS 70 (277)
T ss_pred hhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc-----h-------hHHHHHHHHHHHHHhccCCCCCeeeEeee
Confidence 445588999999999999975 5889999998643210 0 1345788999999986 9999999998
Q ss_pred ccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 248 CNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 248 ~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+.+ ...|+||||+++++|.+++.. .++++..++.++.+++.||.|||+ .+++||||+|+||+++.++.++|+|
T Consensus 71 ~~~~~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~p~ni~i~~~~~~~l~d 144 (277)
T cd06917 71 YLKGPRLWIIMEYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHK--VGVIHRDIKAANILVTNTGNVKLCD 144 (277)
T ss_pred eeeCCEEEEEEecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCcCHHHEEEcCCCCEEEcc
Confidence 776 788999999999999998864 268999999999999999999999 8899999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||++........ ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||...............
T Consensus 145 fg~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~---- 217 (277)
T cd06917 145 FGVAALLNQNSS---KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS---- 217 (277)
T ss_pred CCceeecCCCcc---ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC----
Confidence 999876654321 1234578999999997643 3588999999999999999999999865432211111100
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..........+..+.+++.+|+..+|++||++.++++
T Consensus 218 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 218 ------KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred ------CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0011111124456888999999999999999999975
No 279
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.1e-36 Score=290.89 Aligned_cols=251 Identities=29% Similarity=0.437 Sum_probs=195.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... +++.||+|.++..... ......+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~ 70 (264)
T cd06626 2 WQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-----------PKTIKEIADEMKVLELLKHPNLVKYYGVEVH 70 (264)
T ss_pred ceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-----------hHHHHHHHHHHHHHHhCCCCChhheeeeEec
Confidence 456689999999999999875 5789999998754321 1114568999999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.. ...+++..+..++.+++.||.|||+ .+++|+||+|+||++++++.+||+|||+
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~kl~d~g~ 145 (264)
T cd06626 71 REKVYIFMEYCSGGTLEELLEH---GRILDEHVIRVYTLQLLEGLAYLHS--HGIVHRDIKPANIFLDHNGVIKLGDFGC 145 (264)
T ss_pred CCEEEEEEecCCCCcHHHHHhh---cCCCChHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEECCCCCEEEccccc
Confidence 788999999999999999876 3458899999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceee-eccCCCCCCCCCcccccC-C---CCcccchHHHHHHHHHHHcCCCCCCCCcchh-hHHHhhhcccc
Q psy5603 330 VKMSETSNMKTMY-TENLTGTRPYMPPEAMHC-Q---ISTKTDVFSYGVILLELLTGMKPIDDNNTIL-YYYLVVEQEVP 403 (455)
Q Consensus 330 a~~~~~~~~~~~~-~~~~~gt~~Y~aPE~~~~-~---~~~~sDv~SlGvvl~elltG~~p~~~~~~~~-~~~~~~~~~~~ 403 (455)
+............ .....++..|+|||.+.+ . .+.++||||||+++|++++|..||...+... ..........
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~- 224 (264)
T cd06626 146 AVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHK- 224 (264)
T ss_pred ccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCC-
Confidence 8876543322111 223578899999997654 3 6789999999999999999999997653211 1111111000
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+... ....++..+.++|.+||..+|.+||++.+++.
T Consensus 225 ------~~~~--~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 ------PPIP--DSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ------CCCC--cccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000 01123455778999999999999999999864
No 280
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1e-36 Score=289.72 Aligned_cols=248 Identities=32% Similarity=0.504 Sum_probs=195.5
Q ss_pred CCCccCcCCCeEEEEEEEcC-----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
+.+.||.|+||.||++.+.. +..||+|+++...... ....+.+|+..+.+++|+||+++++++
T Consensus 3 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~------------~~~~~~~e~~~l~~l~~~~i~~~~~~~ 70 (258)
T smart00219 3 LGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ------------QIEEFLREARIMRKLDHPNIVKLLGVC 70 (258)
T ss_pred ccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH------------HHHHHHHHHHHHHhcCCCchheEEEEE
Confidence 45789999999999999864 3789999986432200 145688999999999999999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ +..+++|||+++++|.+++..... ..+++.++..++.|++.||+|||+ .+++||||||+||+++.++.++|+||
T Consensus 71 ~~~~~~~~i~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~--~~~~h~dl~~~nil~~~~~~~~l~df 147 (258)
T smart00219 71 TEEEPLMIVMEYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLES--KNFIHRDLAARNCLVGENLVVKISDF 147 (258)
T ss_pred cCCCeeEEEEeccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhc--CCeeecccccceEEEccCCeEEEccc
Confidence 77 888999999999999999876332 128999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
|+++......... .....++..|+|||.+ .+.++.++|+||||+++|+|++ |.+||.................
T Consensus 148 g~~~~~~~~~~~~--~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~--- 222 (258)
T smart00219 148 GLSRDLYDDDYYK--KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR--- 222 (258)
T ss_pred CCceecccccccc--cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---
Confidence 9988765442211 1123477899999966 4467889999999999999998 8899887553333222221110
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
...+...+..+.+++.+|+..+|++||++.++++.|
T Consensus 223 --------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 --------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred --------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011112445688899999999999999999998764
No 281
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=6.1e-37 Score=291.70 Aligned_cols=248 Identities=23% Similarity=0.338 Sum_probs=195.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++... +|+.||+|++....... .....+.+|+.++++++||||+++++++.+
T Consensus 2 y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (256)
T cd08218 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-----------KEREESRKEVAVLSNMKHPNIVQYQESFEE 70 (256)
T ss_pred ceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-----------HHHHHHHHHHHHHHhCCCCCeeeeEeeecC
Confidence 455689999999999999876 47899999986432210 013458899999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.... ...+++.+++.++.|++.|+.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 71 ~~~~~lv~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~l~~~nil~~~~~~~~l~d~~~ 147 (256)
T cd08218 71 NGNLYIVMDYCEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHD--RKILHRDIKSQNIFLTKDGTIKLGDFGI 147 (256)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEEeeccc
Confidence 78899999999999999887533 2357899999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......|++.|+|||.+. +..+.++|+|||||++++|++|..||...+.......+.....+
T Consensus 148 ~~~~~~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~----- 219 (256)
T cd08218 148 ARVLNSTVE---LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYP----- 219 (256)
T ss_pred eeecCcchh---hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCC-----
Confidence 876543221 122346889999999764 45788999999999999999999999866533222222111110
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+..+.++|.+|+..+|.+||++.+|++
T Consensus 220 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 ------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 011223455888999999999999999999986
No 282
>KOG0199|consensus
Probab=100.00 E-value=5.9e-38 Score=315.19 Aligned_cols=247 Identities=26% Similarity=0.386 Sum_probs=206.6
Q ss_pred CccCcCCCeEEEEEEEcC--Cc--EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCc
Q psy5603 176 NKLGEGQFGTVYYGKLKN--GM--EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--~~--~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 251 (455)
++||+|+||.|++|.|+. |+ .||||.++...... ....|.+|+.+|.+++|+|++++||...+.
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~------------~mddflrEas~M~~L~H~hliRLyGvVl~q 183 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA------------IMDDFLREASHMLKLQHPHLIRLYGVVLDQ 183 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch------------hHHHHHHHHHHHHhccCcceeEEeeeeccc
Confidence 789999999999999974 44 57999998654422 134599999999999999999999999988
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
...+|+|.++.|||.++|+. .....|.....+.++.|||.|++||.+ +++|||||-..|+||...-.+||+||||.|
T Consensus 184 p~mMV~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLes--krlvHRDLAARNlllasprtVKI~DFGLmR 260 (1039)
T KOG0199|consen 184 PAMMVFELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLES--KRLVHRDLAARNLLLASPRTVKICDFGLMR 260 (1039)
T ss_pred hhhHHhhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhh--hhhhhhhhhhhhheecccceeeeeccccee
Confidence 88899999999999999998 446789999999999999999999999 899999999999999999999999999999
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
....++..-.+.....-...|+|||.+ .+.++.+||||+|||++|||+| |..||.+.+...+...+..
T Consensus 261 aLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~---------- 330 (1039)
T KOG0199|consen 261 ALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA---------- 330 (1039)
T ss_pred ccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc----------
Confidence 887665433334444455679999954 6789999999999999999999 9999999876555444432
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
......+..+++.+.+++..||.++|.+||++..+.+.
T Consensus 331 -~erLpRPk~csedIY~imk~cWah~paDRptFsair~~ 368 (1039)
T KOG0199|consen 331 -GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED 368 (1039)
T ss_pred -cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence 22222344577778999999999999999999998643
No 283
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=1.1e-36 Score=295.84 Aligned_cols=258 Identities=23% Similarity=0.320 Sum_probs=190.4
Q ss_pred CCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
..|++.+.||+|+||.||+|..+ +++.||||.+........ ...+.+|++++++++|+||+++++++
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~------------~~~~~~E~~~l~~l~h~~i~~~~~~~ 72 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA------------PFTAIREASLLKDLKHANIVTLHDII 72 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC------------chhHHHHHHHHhhCCCcceeeEEEEE
Confidence 34566799999999999999986 478999999865332110 12367899999999999999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
.+ ...|+||||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 73 ~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~df 147 (291)
T cd07844 73 HTKKTLTLVFEYLD-TDLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQ--RRVLHRDLKPQNLLISERGELKLADF 147 (291)
T ss_pred ecCCeEEEEEecCC-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCeecccCCHHHEEEcCCCCEEECcc
Confidence 77 78899999997 59999887643 368999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchh-hHHHhhh-cccc
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTIL-YYYLVVE-QEVP 403 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~-~~~~~~~-~~~~ 403 (455)
|+++....... ......++..|+|||.+.+ .++.++||||||+++|+|++|..||....... ....... -..+
T Consensus 148 g~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~ 224 (291)
T cd07844 148 GLARAKSVPSK---TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTP 224 (291)
T ss_pred ccccccCCCCc---cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCC
Confidence 99875432211 1122356888999997643 46889999999999999999999997654111 1000000 0000
Q ss_pred hhh----------ccchhccCCCh-------hHHH--HHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 VRE----------VLDKEAGEWNE-------THVE--TLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~----------~~d~~~~~~~~-------~~~~--~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ........... .... ..+.+++.+||..+|++||++.++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 225 TEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 00000000000 0111 45678999999999999999999874
No 284
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.3e-36 Score=297.80 Aligned_cols=246 Identities=26% Similarity=0.395 Sum_probs=192.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+...+.||+|+||.||+|.+. ++..||+|++........ .....+.+|++++++++|||++++++++.+
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 96 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSN----------EKWQDIIKEVKFLQRIKHPNSIEYKGCYLR 96 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCch----------HHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344488999999999999975 478999999864322110 113458889999999999999999998876
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+. |+|.+.+... ..++++.++..++.+++.||.|||+ ++++||||+|+||+++.++.+||+|||+
T Consensus 97 ~~~~~lv~e~~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~--~~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 97 EHTAWLVMEYCL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred CCeEEEEEeCCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCcccEEECCCCCEEEecCCC
Confidence 77899999996 5888877543 3468999999999999999999999 8899999999999999999999999998
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccc----cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR 405 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~ 405 (455)
+..... .....|+..|+|||.+ .+..+.++|+|||||++|||++|..||.................
T Consensus 172 ~~~~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--- 241 (317)
T cd06635 172 ASIASP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--- 241 (317)
T ss_pred ccccCC-------cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccC---
Confidence 765432 2235788999999965 24578899999999999999999999977543322222211110
Q ss_pred hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 406 EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 406 ~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
.......++..+.+++.+|+..+|.+||++.++++.+
T Consensus 242 -------~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 242 -------PTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -------CCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 1111223455688999999999999999999998743
No 285
>KOG0586|consensus
Probab=100.00 E-value=1.3e-37 Score=311.22 Aligned_cols=249 Identities=25% Similarity=0.398 Sum_probs=205.9
Q ss_pred CCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 167 NRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 167 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
.....|.+...||+|.|+.|.+|++. ++..||||.+.+..... ...+.+.+|+++++.++|||||+++
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~-----------~~~~k~~rev~imk~l~HPnIvkl~ 121 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP-----------SKRQKLGREVDIMKSLNHPNIVKLF 121 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh-----------HHHHHHHHHHHHHHhcCCcceeeee
Confidence 33455677799999999999999976 58999999997654311 1245588999999999999999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
.+... ..+|+||||+.+|.+++++...+ ...+..+..++.|+.+|++|||+ ++|||||||.+||||+.+..+||
T Consensus 122 ~v~~t~~~lylV~eya~~ge~~~yl~~~g---r~~e~~ar~~F~q~vsaveYcH~--k~ivHrdLk~eNilL~~~mnikI 196 (596)
T KOG0586|consen 122 SVIETEATLYLVMEYASGGELFDYLVKHG---RMKEKEARAKFRQIVSAVEYCHS--KNIVHRDLKAENILLDENMNIKI 196 (596)
T ss_pred eeeeecceeEEEEEeccCchhHHHHHhcc---cchhhhhhhhhHHHHHHHHHHhh--cceeccccchhhcccccccceee
Confidence 98876 89999999999999999999854 46678899999999999999999 89999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCcccccCC--CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+|||++.+..... ....++|++.|.|||++.|. .++++|+||+|++||.|+.|..||++...............
T Consensus 197 aDfgfS~~~~~~~----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~ 272 (596)
T KOG0586|consen 197 ADFGFSTFFDYGL----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY 272 (596)
T ss_pred eccccceeecccc----cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee
Confidence 9999998876443 24568999999999999774 36799999999999999999999998774433333333344
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.++.++. ....++|.+++..+|.+|++++++.+
T Consensus 273 rIp~~ms------------~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 273 RIPFYMS------------CDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred cccceee------------chhHHHHHHhhccCccccCCHHHhhh
Confidence 4443333 23677788999999999999999864
No 286
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=4.1e-37 Score=297.27 Aligned_cols=247 Identities=27% Similarity=0.332 Sum_probs=186.9
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHH-HhhCCccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT-LSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|.++ +|+.||+|+++..... .. ...+..|+.+ ++..+||||+++++++..
T Consensus 4 ~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~-------~~~~~~e~~~~~~~~~~~~iv~~~~~~~~ 71 (283)
T cd06617 4 EVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS-----QE-------QKRLLMDLDISMRSVDCPYTVTFYGALFR 71 (283)
T ss_pred eEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc-----HH-------HHHHHHHHHHHHHHcCCCCeeeeeEEEec
Confidence 44588999999999999986 4899999998643210 00 2235556665 566789999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCC-CeeecCCCCCcEEEcCCCceEEeec
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSK-PIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~-~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...|+||||++ |+|.+++... .....+++..++.++.|++.||.|||+ + +++||||||+||+++.++.+||+||
T Consensus 72 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~~i~h~dlkp~nil~~~~~~~kl~df 148 (283)
T cd06617 72 EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHS--KLSVIHRDVKPSNVLINRNGQVKLCDF 148 (283)
T ss_pred CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhh--cCCeecCCCCHHHEEECCCCCEEEeec
Confidence 78899999995 7888887653 224579999999999999999999998 6 8999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC-----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|+++...... ......|+..|+|||.+.+ .++.++|+|||||++|+|++|..||.................
T Consensus 149 g~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 224 (283)
T cd06617 149 GISGYLVDSV----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP 224 (283)
T ss_pred cccccccccc----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC
Confidence 9987653321 1223568899999997643 357899999999999999999999975432111111000100
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ...+...++..+.++|.+||..+|.+||++.++++
T Consensus 225 ~---------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 225 S---------PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred C---------CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 01112234556888999999999999999999986
No 287
>KOG0667|consensus
Probab=100.00 E-value=2.1e-37 Score=312.53 Aligned_cols=253 Identities=25% Similarity=0.351 Sum_probs=196.5
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-c-----cceee
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-H-----VNLLR 243 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~ 243 (455)
.|++.+.||+|+||.|.+|.+. +++.||||+++..... ..+-..|+.+|..++ | -|+|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f--------------~~Q~~~Ei~iL~~ln~~d~~~~~n~Vr 252 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF--------------LRQAQIEIRILELLNKHDPDDKYNIVR 252 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH--------------HHHHHHHHHHHHHHhccCCCCCeeEEE
Confidence 4577899999999999999876 5899999999865431 344667999999997 4 39999
Q ss_pred ecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC--C
Q psy5603 244 LLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN--F 320 (455)
Q Consensus 244 l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~--~ 320 (455)
+++++.. .+.|||+|.+ ..+|.++|.... ..+++...+..|+.||+.||.+||+ .+|||+||||+||||.+- .
T Consensus 253 m~d~F~fr~HlciVfELL-~~NLYellK~n~-f~Glsl~~ir~~~~Qil~~L~~L~~--l~IIHcDLKPENILL~~~~r~ 328 (586)
T KOG0667|consen 253 MLDYFYFRNHLCIVFELL-STNLYELLKNNK-FRGLSLPLVRKFAQQILTALLFLHE--LGIIHCDLKPENILLKDPKRS 328 (586)
T ss_pred eeeccccccceeeeehhh-hhhHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHh--CCeeeccCChhheeeccCCcC
Confidence 9998876 9999999999 789999998654 4569999999999999999999999 789999999999999643 4
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
.+||+|||++.+...... ....+.-|.|||++ ...++.+.|+||||||++||++|.+.|.+.+.......+.+
T Consensus 329 ~vKVIDFGSSc~~~q~vy------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e 402 (586)
T KOG0667|consen 329 RIKVIDFGSSCFESQRVY------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIE 402 (586)
T ss_pred ceeEEecccccccCCcce------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHH
Confidence 899999999987654321 34667889999966 45789999999999999999999999988874433333221
Q ss_pred -cccch----------hhccch--------------------------------hccC-----CC---hhHHHHHHHHHH
Q psy5603 400 -QEVPV----------REVLDK--------------------------------EAGE-----WN---ETHVETLISIVF 428 (455)
Q Consensus 400 -~~~~~----------~~~~d~--------------------------------~~~~-----~~---~~~~~~~l~~Li 428 (455)
-..+. ..+++. ...+ +. .......+.++|
T Consensus 403 ~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dfl 482 (586)
T KOG0667|consen 403 VLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFL 482 (586)
T ss_pred HhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHH
Confidence 11110 011111 0000 00 113345688999
Q ss_pred HhhhccCcCCCCCHHHHHH
Q psy5603 429 EKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 429 ~~~l~~dp~~RPs~~evl~ 447 (455)
++|+..||.+|+|..+.++
T Consensus 483 k~~L~~dP~~R~tp~qal~ 501 (586)
T KOG0667|consen 483 KRCLEWDPAERITPAQALN 501 (586)
T ss_pred HHHhccCchhcCCHHHHhc
Confidence 9999999999999999875
No 288
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.7e-36 Score=288.25 Aligned_cols=246 Identities=24% Similarity=0.358 Sum_probs=194.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||++... ++..+|||.+....... .....+.+|++++++++||||+++++.+..
T Consensus 2 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 70 (256)
T cd08220 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-----------DERLAAQNECQVLKLLSHPNIIEYYENFLE 70 (256)
T ss_pred ceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-----------HHHHHHHHHHHHHhhCCCCchhheeeeEec
Confidence 445589999999999999875 47889999986432210 114568899999999999999999997665
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC-CceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~DFG 328 (455)
...++||||+++++|.+++.... ...+++..+..++.+++.||.|||+ ++++||||||+||+++++ +.+||+|||
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~~l~d~~ 147 (256)
T cd08220 71 DKALMIVMEYAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHT--KLILHRDLKTQNILLDKHKMVVKIGDFG 147 (256)
T ss_pred CCEEEEEEecCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEEccCC
Confidence 78899999999999999997643 3458999999999999999999999 889999999999999855 568999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc-ccchhh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPVRE 406 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~~~ 406 (455)
++....... ......|+..|+|||.+.+ ..+.++|+||||+++|+|++|..||...+........... ..++
T Consensus 148 ~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 221 (256)
T cd08220 148 ISKILSSKS----KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPI-- 221 (256)
T ss_pred CceecCCCc----cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCC--
Confidence 988654332 1223578899999997654 5688999999999999999999999876533222222111 1111
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+..++..+.+++.+|+..+|.+||++.+++.
T Consensus 222 ----------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 222 ----------SDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----------CCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 1123445888999999999999999999975
No 289
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.2e-36 Score=294.21 Aligned_cols=257 Identities=24% Similarity=0.326 Sum_probs=194.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||.|++|.||+|+++ +|..||||+++...... ....+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 69 (284)
T cd07836 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG------------TPSTAIREISLMKELKHENIVRLHDVIHT 69 (284)
T ss_pred ceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc------------chHHHHHHHHHHHhhcCCCEeeeeeeEee
Confidence 345589999999999999986 48899999987543210 12346789999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||++ ++|.+++.......++++.++..++.|++.||.|||+ .+++||||||+||++++++.++|+|||+
T Consensus 70 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~--~~i~h~dl~p~ni~~~~~~~~~l~d~g~ 146 (284)
T cd07836 70 ENKLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHE--NRVLHRDLKPQNLLINKRGELKLADFGL 146 (284)
T ss_pred CCcEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHH--CCeeeCCCCHHHEEECCCCcEEEeecch
Confidence 78899999997 5898888765544579999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccch--
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPV-- 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~-- 404 (455)
++....... ......++..|+|||.+.+ .++.++|+|||||++|+|++|..||.............. ...+.
T Consensus 147 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (284)
T cd07836 147 ARAFGIPVN---TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTES 223 (284)
T ss_pred hhhhcCCcc---ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChh
Confidence 875433211 1123467889999997644 357899999999999999999999987653222111111 00000
Q ss_pred --------hhccc-------hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 --------REVLD-------KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 --------~~~~d-------~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... ...... ...++..+.+++.+|+..+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 224 TWPGISQLPEYKPTFPRYPPQDLQQL-FPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hHHHHhcCchhcccccCCChHHHHHH-hhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 000000 1123566889999999999999999999874
No 290
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.9e-37 Score=293.69 Aligned_cols=248 Identities=24% Similarity=0.375 Sum_probs=193.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|..+ +++.||+|++..... ....+.+|+.+++++ .|+||+++++++.
T Consensus 8 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~ 73 (275)
T cd06608 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--------------EEEEIKEEYNILRKYSNHPNIATFYGAFI 73 (275)
T ss_pred eeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--------------hHHHHHHHHHHHHHhcCCCChheEEEEEE
Confidence 455599999999999999986 478899999864321 134588999999999 7999999999875
Q ss_pred C-------ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 250 N-------IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+ ...++||||+++++|.+++.... ....+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.
T Consensus 74 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~--~~i~H~~l~p~ni~~~~~~~ 151 (275)
T cd06608 74 KKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHE--NKVIHRDIKGQNILLTKNAE 151 (275)
T ss_pred ecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhc--CCcccCCCCHHHEEEccCCe
Confidence 4 34799999999999999987533 13578999999999999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCcccccC------CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHH
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
+||+|||++....... .......|+..|+|||.+.+ .++.++|||||||++|+|++|..||..........
T Consensus 152 ~~l~d~~~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 152 VKLVDFGVSAQLDSTL---GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred EEECCCccceecccch---hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 9999999987654322 11234578999999997632 35778999999999999999999997544222111
Q ss_pred HhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... .... ......++..+.+++.+|+..||++||++.++++
T Consensus 229 ~~~~~--~~~~-------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRN--PPPT-------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred Hhhcc--CCCC-------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11110 1111 1112235567889999999999999999999975
No 291
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.7e-37 Score=304.53 Aligned_cols=259 Identities=23% Similarity=0.364 Sum_probs=191.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.++||+|+||.||+|.++ +|+.||||++..... . .....+.+|+.++++++||||+++++++.
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~------~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 73 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH------Q------TFCQRTLREIKILRRFKHENIIGILDIIR 73 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc------c------hhHHHHHHHHHHHHhCCCCCcCchhheee
Confidence 4566799999999999999876 488999999853211 0 01344778999999999999999998654
Q ss_pred C------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 250 N------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 250 ~------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
. ...|+|+||+. ++|.+.+.. .++++..+..++.|++.||.|||+ .+++||||||+||+++.++.+|
T Consensus 74 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~--~~ivH~dlkp~Nill~~~~~~k 146 (336)
T cd07849 74 PPSFESFNDVYIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHS--ANVLHRDLKPSNLLLNTNCDLK 146 (336)
T ss_pred cccccccceEEEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEECCCCCEE
Confidence 3 34689999995 588877754 368999999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-- 399 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-- 399 (455)
|+|||+++................||..|+|||.+. ..++.++|||||||++|+|++|++||...+..........
T Consensus 147 l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~ 226 (336)
T cd07849 147 ICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVL 226 (336)
T ss_pred ECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence 999999876543322222223457899999999653 3578899999999999999999999976542211111100
Q ss_pred cccc---hhhccchhc------------cCCC--hhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 400 QEVP---VREVLDKEA------------GEWN--ETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 400 ~~~~---~~~~~d~~~------------~~~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.... .....+... ..+. ....+..+.+++.+||..+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 227 GTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 000000000 0000 01234557899999999999999999999874
No 292
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=1.2e-36 Score=294.25 Aligned_cols=256 Identities=23% Similarity=0.321 Sum_probs=192.4
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||.|++|.||+|.++ +|+.||||++........ ....+.+|++++++++|||++++++++.+
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~ 70 (283)
T cd07835 2 QKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEG-----------VPSTAIREISLLKELNHPNIVRLLDVVHSE 70 (283)
T ss_pred chheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccccc-----------chhHHHHHHHHHHhcCCCCccCHhheeccC
Confidence 45588999999999999976 589999999875432111 02347789999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||+ +++|.+++..... ..+++..++.++.|++.||.|||+ ++++||||+|+||+++.++.++|+|||++
T Consensus 71 ~~~~iv~e~~-~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~--~~~~H~dl~p~nil~~~~~~~~l~df~~~ 146 (283)
T cd07835 71 NKLYLVFEFL-DLDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHS--HRVLHRDLKPQNLLIDREGALKLADFGLA 146 (283)
T ss_pred CeEEEEEecc-CcCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeCCCCCHHHEEEcCCCcEEEeecccc
Confidence 7889999999 5799999876432 368999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc-ccch---
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ-EVPV--- 404 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~-~~~~--- 404 (455)
+....... ......++..|+|||.+.+ .++.++|+||||+++|+|++|.+||............... ..+.
T Consensus 147 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 223 (283)
T cd07835 147 RAFGVPVR---TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDV 223 (283)
T ss_pred cccCCCcc---ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHH
Confidence 75432211 1123356889999997644 3588999999999999999999999876532221111110 0000
Q ss_pred -------hhccc-------hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 -------REVLD-------KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 -------~~~~d-------~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++... ..... ....++..+.++|.+|+..+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 224 WPGVTSLPDYKPTFPKWARQDLSK-VVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhchhhhhhcccccccchhh-hcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000 00000 01223456788999999999999999999874
No 293
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=9.4e-37 Score=295.10 Aligned_cols=242 Identities=22% Similarity=0.275 Sum_probs=182.8
Q ss_pred ccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHH---HHhhCCccceeeecccccC-c
Q psy5603 177 KLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ---TLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~-~ 251 (455)
.||+|+||.||++... +++.||+|.+.......... ...+.+|.. ++...+||||+.+++++.. +
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 70 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----------ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD 70 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH----------HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC
Confidence 4899999999999986 47899999987543211110 122334443 3344579999999987765 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||+++|+|.+++... ..+++.++..++.|++.||.|||+ .+++||||||+|||+++++.++|+|||++.
T Consensus 71 ~~~lv~e~~~~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~--~~ivH~dikp~Nil~~~~~~~~l~dfg~~~ 145 (279)
T cd05633 71 KLCFILDLMNGGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLAC 145 (279)
T ss_pred eEEEEEecCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCcCCCCCCHHHEEECCCCCEEEccCCcce
Confidence 889999999999999998763 469999999999999999999999 889999999999999999999999999986
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-C-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-C-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...... .....||..|+|||.+. + .++.++|+|||||++|||++|..||.............. ....
T Consensus 146 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~----- 214 (279)
T cd05633 146 DFSKKK-----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTV----- 214 (279)
T ss_pred eccccC-----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcC-----
Confidence 543221 12347899999999764 3 468899999999999999999999976542211111100 0000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
....+..++..+.++|.+|+..||.+|| +++++++
T Consensus 215 ---~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 215 ---NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKE 254 (279)
T ss_pred ---CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence 0011123455688899999999999999 5888876
No 294
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.4e-36 Score=289.37 Aligned_cols=252 Identities=29% Similarity=0.395 Sum_probs=193.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++++.||+|+||.||+|.+. ++..||+|.+......... ......+.+|++++++++|+||+++++++.+
T Consensus 4 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~--------~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 75 (264)
T cd06653 4 WRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQET--------SKEVNALECEIQLLKNLRHDRIVQYYGCLRD 75 (264)
T ss_pred eeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchh--------hHHHHHHHHHHHHHHHcCCCCcceEEEEEEc
Confidence 456699999999999999975 4889999988543211110 1124568899999999999999999998754
Q ss_pred ---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++|+||+++++|.+++... .++++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+||
T Consensus 76 ~~~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~--~~i~H~dl~p~ni~i~~~~~~~l~df 150 (264)
T cd06653 76 PEEKKLSIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHS--NMIVHRDIKGANILRDSAGNVKLGDF 150 (264)
T ss_pred CCCCEEEEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEECcc
Confidence 4578999999999999998763 358899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
|+++................|+..|+|||.+.+ ..+.++|+|||||++|+|++|..||............... +.
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~-- 226 (264)
T cd06653 151 GASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQ--PT-- 226 (264)
T ss_pred ccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcC--CC--
Confidence 998865332111111234578999999997654 5788999999999999999999999865432211111100 00
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+..+...+.+++.+||. +|.+||+..+++.
T Consensus 227 ------~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 227 ------KPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ------CCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 011123455668899999999 5799999998764
No 295
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=8.9e-37 Score=291.09 Aligned_cols=248 Identities=27% Similarity=0.363 Sum_probs=193.8
Q ss_pred cCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||++.+.. |+.||+|.+....... ......+.+|++++++++||||+++++.+.. ...|+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~----------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 70 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIR----------KNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYL 70 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhh----------hhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEE
Confidence 6999999999999874 8999999986432211 1124568899999999999999999997766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
|+||+++++|.+++.+.. .+++..+..++.|++.||.|||+ .+++||||+|+||++++++.++|+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~--~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~ 145 (265)
T cd05579 71 VMEYLPGGDLASLLENVG---SLDEDVARIYIAEIVLALEYLHS--NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLV 145 (265)
T ss_pred EEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHH--cCeecCCCCHHHeEEcCCCCEEEEecccchhccc
Confidence 999999999999998743 68999999999999999999999 8899999999999999999999999999876543
Q ss_pred CCcc-----eeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 336 SNMK-----TMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 336 ~~~~-----~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
.... ........++..|+|||.. ....+.++|+||||+++|++++|..||...................+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-- 223 (265)
T cd05579 146 RRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPED-- 223 (265)
T ss_pred CcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCcc--
Confidence 3210 1122345788899999965 4457889999999999999999999998766433322222111111110
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...+..+.+++.+|+..+|.+||++..+.+.|+
T Consensus 224 --------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 224 --------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred --------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 012456788999999999999999966665554
No 296
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=9.6e-37 Score=295.28 Aligned_cols=258 Identities=25% Similarity=0.312 Sum_probs=193.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++ +++.||||+++...... .....+.+|++++++++|+||+++++++.+
T Consensus 3 y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 71 (288)
T cd07833 3 YEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDE-----------DVKKTALREVKVLRQLRHENIVNLKEAFRR 71 (288)
T ss_pred eeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccc-----------cchhHHHHHHHHHHhcCCCCeeehhheEEE
Confidence 456689999999999999987 47899999986432211 113458899999999999999999998876
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..++||||++++.+..+... ...+++.++..++.+++.||.|||+ .+++|+||+|+||++++++.+||+|||+
T Consensus 72 ~~~~~iv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 72 KGRLYLVFEYVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHS--HNIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred CCEEEEEEecCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEEEEeeec
Confidence 788999999988777665544 2358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cccc--
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP-- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~-- 403 (455)
+........ .......++..|+|||++.+ .++.++|+||||+++|+|++|.+||.............. ....
T Consensus 147 ~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (288)
T cd07833 147 ARALRARPA--SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPS 224 (288)
T ss_pred ccccCCCcc--ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 887654332 11234578899999996643 467899999999999999999999986543221111100 0000
Q ss_pred ---------------hhhccchh-ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 ---------------VREVLDKE-AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ---------------~~~~~d~~-~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+.. .....+..++..+.+||.+|+..+|++||+++++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 225 HQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000 000111223567889999999999999999999874
No 297
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.9e-36 Score=294.30 Aligned_cols=257 Identities=22% Similarity=0.286 Sum_probs=189.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||+|... +|..||+|.+....... ....+.+|+.++++++|+||+++++++.
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------------~~~~~~~e~~~l~~l~h~ni~~~~~~~~ 73 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG------------VPFTAIREASLLKGLKHANIVLLHDIIH 73 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC------------CcHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 3455689999999999999875 48899999986443211 0223678999999999999999999877
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...|+|+||+. ++|.+++.... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||
T Consensus 74 ~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 74 TKETLTFVFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHG--QHILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred cCCeEEEEEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCChHHEEEcCCCcEEEeccc
Confidence 7 78899999995 78877765432 357888999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc--ccc-
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ--EVP- 403 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~- 403 (455)
+++....... ......++..|+|||.+.+ .++.++|+|||||++|||+||..||............... ..+
T Consensus 149 ~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T cd07870 149 LARAKSIPSQ---TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPT 225 (291)
T ss_pred cccccCCCCC---CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCC
Confidence 9875433211 1223467899999997754 4688999999999999999999999865532111110000 000
Q ss_pred ---------hhhccchhc---------cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 ---------VREVLDKEA---------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ---------~~~~~d~~~---------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+....... ..+........+.+++.+|+..||++|||+.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 226 EDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000 00000011345778999999999999999999864
No 298
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=8.2e-37 Score=297.54 Aligned_cols=241 Identities=25% Similarity=0.400 Sum_probs=190.3
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
..||+|+||.||++... ++..||||++..... .....+.+|+.+++.++|+||+++++.+.. +..
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~ 94 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQ-------------QRRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL 94 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchH-------------HHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE
Confidence 67999999999999875 478999999853211 113458899999999999999999997766 888
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++.. ..+++..+..++.|++.||.|||+ ++++||||||+||++++++.++|+|||++...
T Consensus 95 ~lv~e~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~--~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~ 168 (292)
T cd06658 95 WVVMEFLEGGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHN--QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQV 168 (292)
T ss_pred EEEEeCCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEcCCCCEEEccCcchhhc
Confidence 999999999999998854 358999999999999999999999 88999999999999999999999999998754
Q ss_pred ccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
..... ......|+..|+|||.+.+ .++.++|+||||+++|||++|..||............... .....
T Consensus 169 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~-------~~~~~ 238 (292)
T cd06658 169 SKEVP---KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDN-------LPPRV 238 (292)
T ss_pred ccccc---cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-------CCCcc
Confidence 33221 1223568999999997644 6788999999999999999999999865533221111110 00000
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......+..+.+++.+|+..+|++||++.++++
T Consensus 239 --~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 271 (292)
T cd06658 239 --KDSHKVSSVLRGFLDLMLVREPSQRATAQELLQ 271 (292)
T ss_pred --ccccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 001123456888999999999999999999986
No 299
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-36 Score=295.21 Aligned_cols=252 Identities=29% Similarity=0.355 Sum_probs=192.0
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC--
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-- 250 (455)
..++||.|++|.||+|.++ +++.||+|.+...... .....+.+|++++++++||||+++++++.+
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 72 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP------------DLQKQILRELEINKSCKSPYIVKYYGAFLDES 72 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch------------HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccC
Confidence 3488999999999999986 4789999998643210 113458899999999999999999997744
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|+||||+++++|.+++.... ....++...+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||
T Consensus 73 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~--~~i~H~dl~~~nil~~~~~~~~l~dfg 150 (287)
T cd06621 73 SSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHS--RKIIHRDIKPSNILLTRKGQVKLCDFG 150 (287)
T ss_pred CCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCCHHHEEEecCCeEEEeecc
Confidence 46799999999999999876422 24568999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcc---hhhHHHhhhcccch
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT---ILYYYLVVEQEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~---~~~~~~~~~~~~~~ 404 (455)
++....... .....++..|+|||.+. +.++.++|+|||||++|+|++|..||..... ..............
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd06621 151 VSGELVNSL-----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPN 225 (287)
T ss_pred ccccccccc-----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCc
Confidence 987543321 12346788999999654 4678899999999999999999999986632 00000000011011
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. .....++..+.+++.+|+..+|.+||++.|+++
T Consensus 226 ~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 226 PELKDEP---GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred hhhccCC---CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 1110000 001234566889999999999999999999987
No 300
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.9e-36 Score=289.52 Aligned_cols=241 Identities=26% Similarity=0.359 Sum_probs=190.9
Q ss_pred cCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||.|+||.||+|+++. ++.||+|++........ .....+.+|++++++++||||+++++++.+ ...|+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 70 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVET----------GQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYM 70 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhh----------hHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEE
Confidence 6999999999999864 78999999865432110 113568899999999999999999998766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
|+||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~--~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~ 145 (262)
T cd05572 71 LMEYCLGGELWTILRDR---GLFDEYTARFYIACVVLAFEYLHN--RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKS 145 (262)
T ss_pred EEecCCCCcHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCc
Confidence 99999999999999763 358999999999999999999999 8899999999999999999999999999886644
Q ss_pred CCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcc--hhhHHHhhhcccchhhccchhc
Q psy5603 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT--ILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~--~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.. ......|+..|+|||.+. ..++.++|+||||+++|+|++|..||..... .............
T Consensus 146 ~~----~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------- 212 (262)
T cd05572 146 GQ----KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGK--------- 212 (262)
T ss_pred cc----ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCC---------
Confidence 32 123457889999999664 4678899999999999999999999987652 2221111100000
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCC-----HHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRAS-----MRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-----~~evl~ 447 (455)
.. .+...+..+.++|.+|+..+|++||+ ++|+++
T Consensus 213 ~~-~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 213 LE-FPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred CC-CCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 00 11122456888999999999999999 677765
No 301
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.6e-36 Score=291.75 Aligned_cols=242 Identities=21% Similarity=0.272 Sum_probs=182.9
Q ss_pred ccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHH---HHHHhhCCccceeeecccccC-c
Q psy5603 177 KLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENE---VQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E---~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
.||+|+||.||+|... +++.||+|.+.......... ...+..| ++.++...||||+.+++++.+ .
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 70 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG----------ETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD 70 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh----------HHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence 4899999999999875 47899999987543211100 1113333 344555689999999997766 8
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+||||++||+|.+++.. ..++++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 71 ~~~~v~e~~~g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~nili~~~~~~kl~dfg~~~ 145 (278)
T cd05606 71 KLSFILDLMNGGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHN--RFVVYRDLKPANILLDEHGHVRISDLGLAC 145 (278)
T ss_pred EEEEEEecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH--CCEEcCCCCHHHEEECCCCCEEEccCcCcc
Confidence 88999999999999998875 3469999999999999999999999 889999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc-C-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH-C-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
...... .....|+..|+|||.+. + .++.++|+|||||++|||++|..||................ ...
T Consensus 146 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~ 215 (278)
T cd05606 146 DFSKKK-----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL-----TMA 215 (278)
T ss_pred ccCccC-----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh-----ccC
Confidence 543221 22347999999999764 3 47889999999999999999999998763211111100000 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..+ +...+..+.+++.+|+..+|.+|| ++.++++
T Consensus 216 ---~~~-~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 216 ---VEL-PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred ---CCC-CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 001 112345688899999999999999 8989875
No 302
>KOG4645|consensus
Probab=100.00 E-value=1e-38 Score=339.53 Aligned_cols=248 Identities=28% Similarity=0.395 Sum_probs=199.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
+..+.+||.|.||.||.|... +|...|+|-++..... ........+|+.++..++|||+|++||+-..
T Consensus 1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-----------~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH 1305 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-----------HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH 1305 (1509)
T ss_pred eccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-----------cccCcchHHHHHHHHhccCccccccCceeec
Confidence 345699999999999999864 5888999988654332 1113447889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
+..+|.||||.+|+|.+.+.. +.-.++.....+..|++.|+.|||+ +|||||||||+||+|+.+|.+|++|||.
T Consensus 1306 Rekv~IFMEyC~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~--~gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1306 REKVYIFMEYCEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHE--HGIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHHHHHhccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHh--cCceecCCCccceeeecCCcEEeecccc
Confidence 788899999999999999886 3346777777889999999999999 8999999999999999999999999999
Q ss_pred ccccccCC-cceeeeccCCCCCCCCCcccccCC----CCcccchHHHHHHHHHHHcCCCCCCCCcc--hhhHHHhhhccc
Q psy5603 330 VKMSETSN-MKTMYTENLTGTRPYMPPEAMHCQ----ISTKTDVFSYGVILLELLTGMKPIDDNNT--ILYYYLVVEQEV 402 (455)
Q Consensus 330 a~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~sDv~SlGvvl~elltG~~p~~~~~~--~~~~~~~~~~~~ 402 (455)
|....... ..........||+.|||||++.|. -.-+.||||+|||++||+||+.||...+. ..++.+......
T Consensus 1381 a~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~P 1460 (1509)
T KOG4645|consen 1381 AVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKP 1460 (1509)
T ss_pred eeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCC
Confidence 98776542 111222467899999999988653 34589999999999999999999987763 234443333333
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++++ .++..-.++|..|+..||++|.++.|+++
T Consensus 1461 q~P~------------~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1461 QIPE------------RLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred CCch------------hhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 3332 36667889999999999999999888765
No 303
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=2.4e-36 Score=291.64 Aligned_cols=244 Identities=27% Similarity=0.427 Sum_probs=193.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..++||+|+||.||+|.++ ++..||||.+..... ......+.+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~------------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 73 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA------------EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK 73 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc------------hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe
Confidence 344588999999999999875 478999998753211 0113458899999999999999999998777
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+++++|.+++.. .++++..+..++.+++.|+.|||+ .+++|+||||+||+++.++.++|+|||+
T Consensus 74 ~~~~~lv~e~~~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~dl~p~Ni~i~~~~~~~l~dfg~ 147 (277)
T cd06641 74 DTKLWIIMEYLGGGSALDLLEP----GPLDETQIATILREILKGLDYLHS--EKKIHRDIKAANVLLSEHGEVKLADFGV 147 (277)
T ss_pred CCeEEEEEEeCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHcc--CCeecCCCCHHhEEECCCCCEEEeeccc
Confidence 788999999999999998864 358999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... .......|+..|+|||.+. ...+.++|+|||||++|+|++|..||...........+..... .
T Consensus 148 ~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~--- 219 (277)
T cd06641 148 AGQLTDTQ---IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP--P--- 219 (277)
T ss_pred ceecccch---hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCC--C---
Confidence 87554321 1123357888999999764 4578899999999999999999999976553322222211110 0
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+++.+|+..+|.+||++.++++
T Consensus 220 ------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 252 (277)
T cd06641 220 ------TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK 252 (277)
T ss_pred ------CCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 001123455788899999999999999999987
No 304
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8.1e-37 Score=291.36 Aligned_cols=247 Identities=25% Similarity=0.279 Sum_probs=195.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.++ +++.||+|.+........ .....+.+|++++++++||||+++++++.+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 71 (258)
T cd05578 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEK----------GSVRNVLNERRILQELNHPFLVNLWYSFQD 71 (258)
T ss_pred ceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcch----------hHHHHHHHHHHHHHhCCCCChHHHHHhhcC
Confidence 455689999999999999986 489999999975432110 114568899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+|+||+.|++|.+++... .++++..+..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||+
T Consensus 72 ~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~--~~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 72 EENMYLVVDLLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHS--KGIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred CCeEEEEEeCCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 7889999999999999999763 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+....... ......|+..|+|||.+.+ ..+.++|+||||+++|+|++|..||...+..............
T Consensus 147 ~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~----- 217 (258)
T cd05578 147 ATKVTPDT----LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETA----- 217 (258)
T ss_pred ccccCCCc----cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccc-----
Confidence 87654332 1234578899999996644 5688999999999999999999999876632111111111000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCH--HHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASM--RDIV 446 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~--~evl 446 (455)
....+..++..+.++|.+|+..+|.+||+. ++++
T Consensus 218 ----~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 ----DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ----cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 001112234668889999999999999999 5554
No 305
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.6e-36 Score=295.11 Aligned_cols=256 Identities=22% Similarity=0.287 Sum_probs=191.7
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||.|+||.||+|.++ +++.||+|.++....... ....+.+|+.++.+++||||+++++++.+
T Consensus 8 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 76 (293)
T cd07843 8 EKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEG-----------FPITSLREINILLKLQHPNIVTVKEVVVGS 76 (293)
T ss_pred hhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccccc-----------chhhHHHHHHHHHhcCCCCEEEEEEEEEec
Confidence 34488999999999999987 478999999975432110 12346789999999999999999997643
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|+||||+. ++|.+++.... ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 77 ~~~~~~lv~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 77 NLDKIYMVMEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHD--NWILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred CCCcEEEEehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCCHHHEEECCCCcEEEeecC
Confidence 67899999996 59999887643 368999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccc--
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVP-- 403 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~-- 403 (455)
+++....... ......+++.|+|||.+.+ ..+.++|+||||+++|||++|.+||.............. ...+
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (293)
T cd07843 152 LAREYGSPLK---PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTE 228 (293)
T ss_pred ceeeccCCcc---ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCch
Confidence 9886554321 1123467889999997654 358899999999999999999999986653221111110 0000
Q ss_pred ----------------hhhccchhc-cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 ----------------VREVLDKEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ----------------~~~~~d~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......... ..++...++..+.++|.+|+..+|++||++.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 229 KIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred HHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000 01111113566889999999999999999999975
No 306
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.9e-36 Score=294.61 Aligned_cols=259 Identities=20% Similarity=0.276 Sum_probs=190.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|++.+.||+|+||.||+|.+. +++.||||+++....... ....+.+|+.+++++. ||||+++++++.
T Consensus 3 y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~ 71 (295)
T cd07837 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEG-----------IPPTALREISLLQMLSESIYIVRLLDVEH 71 (295)
T ss_pred ceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccC-----------CchHHHHHHHHHHHccCCCCccceeeeEe
Confidence 345589999999999999986 488999999865322110 1234788999999995 699999999775
Q ss_pred C-ce-----eEEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-CC
Q psy5603 250 N-IM-----NCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NF 320 (455)
Q Consensus 250 ~-~~-----~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-~~ 320 (455)
. .. .|+||||+++ +|.+++..... ..++++..++.++.|++.||.|||+ ++++||||||+||+++. ++
T Consensus 72 ~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~~~nil~~~~~~ 148 (295)
T cd07837 72 VEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK--HGVMHRDLKPQNLLVDKQKG 148 (295)
T ss_pred ecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCChHHEEEecCCC
Confidence 5 33 6899999975 89888865432 3468999999999999999999999 88999999999999998 89
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||+++....... ......+++.|+|||.+.+ .++.++|+||||+++|+|++|..||.............
T Consensus 149 ~~kl~dfg~~~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~ 225 (295)
T cd07837 149 LLKIADLGLGRAFSIPVK---SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIF 225 (295)
T ss_pred eEEEeecccceecCCCcc---ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH
Confidence 999999999875433211 1123357888999996643 46889999999999999999999998765332222211
Q ss_pred hc-ccchhhcc----chh----ccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 EQ-EVPVREVL----DKE----AGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~-~~~~~~~~----d~~----~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ..+..... ... ...+. ...++..+.++|.+|+..+|.+||++.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 226 KLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred HHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 10 00000000 000 00000 0124556888999999999999999999874
No 307
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-36 Score=299.12 Aligned_cols=263 Identities=21% Similarity=0.295 Sum_probs=190.5
Q ss_pred CcCCCccCcCCCeEEEEEEEcC---CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC 248 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 248 (455)
|++.++||+|+||.||+|.++. +..||+|.+......... ....+.+|+.++++++||||+++++++
T Consensus 2 y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~----------~~~~~~~e~~~l~~l~h~~i~~~~~~~ 71 (316)
T cd07842 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTG----------ISQSACREIALLRELKHENVVSLVEVF 71 (316)
T ss_pred ceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccC----------ccHHHHHHHHHHHhcCCCCccceEEEE
Confidence 3455889999999999999854 689999999764321111 123477899999999999999999977
Q ss_pred cC---ceeEEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC----C
Q psy5603 249 NN---IMNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE----N 319 (455)
Q Consensus 249 ~~---~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~----~ 319 (455)
.+ ...|+||||+. ++|.+.+..... ..++++..++.++.|++.||.|||+ .+++||||||+||+++. +
T Consensus 72 ~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~i~h~dlkp~Nil~~~~~~~~ 148 (316)
T cd07842 72 LEHADKSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS--NWVLHRDLKPANILVMGEGPER 148 (316)
T ss_pred eCCCCceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh--CCEeeCCCCHHHEEEcCCCCcc
Confidence 54 46799999996 577777754322 2378999999999999999999999 88999999999999999 9
Q ss_pred CceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhh----
Q psy5603 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILY---- 393 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~---- 393 (455)
+.+||+|||+++................+|..|+|||.+.+ .++.++|+|||||++|+|++|.+||........
T Consensus 149 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~ 228 (316)
T cd07842 149 GVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNP 228 (316)
T ss_pred ceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccch
Confidence 99999999998865443221222334578999999996644 468899999999999999999999986543210
Q ss_pred H-----HHhhh--cccc---------hhhccc---hhc-cCCC--------hh--HHHHHHHHHHHhhhccCcCCCCCHH
Q psy5603 394 Y-----YLVVE--QEVP---------VREVLD---KEA-GEWN--------ET--HVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 394 ~-----~~~~~--~~~~---------~~~~~d---~~~-~~~~--------~~--~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
. ..... .... .++... ... ...+ .. ..+..+.+++.+||..+|++||++.
T Consensus 229 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~ 308 (316)
T cd07842 229 FQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAE 308 (316)
T ss_pred hHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHH
Confidence 0 00000 0000 000000 000 0000 00 2334577899999999999999999
Q ss_pred HHHH
Q psy5603 444 DIVD 447 (455)
Q Consensus 444 evl~ 447 (455)
|+++
T Consensus 309 eil~ 312 (316)
T cd07842 309 EALE 312 (316)
T ss_pred HHhc
Confidence 9875
No 308
>KOG0983|consensus
Probab=100.00 E-value=5.5e-37 Score=278.82 Aligned_cols=243 Identities=26% Similarity=0.384 Sum_probs=189.0
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~~ 252 (455)
..||.|+.|.|++++.+. |...|||.+....... ..++++..+.++.... +|+||+++||+.. ..
T Consensus 98 ~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke------------e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~d 165 (391)
T KOG0983|consen 98 GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE------------ENKRILMDLDVVLKSHDCPYIVQCFGYFITNTD 165 (391)
T ss_pred HhhcCCCccceEEEEEcccceEEEEEeecccCCHH------------HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCch
Confidence 569999999999999874 7889999997543311 1455777888877764 8999999998866 66
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..+.||.| ..-+..+|.+.. .++++..+-++...+..||.||.+ .++|||||+||+|||+|+.|.+|+||||++-.
T Consensus 166 V~IcMelM-s~C~ekLlkrik--~piPE~ilGk~tva~v~AL~YLKe-KH~viHRDvKPSNILlDe~GniKlCDFGIsGr 241 (391)
T KOG0983|consen 166 VFICMELM-STCAEKLLKRIK--GPIPERILGKMTVAIVKALYYLKE-KHGVIHRDVKPSNILLDERGNIKLCDFGISGR 241 (391)
T ss_pred HHHHHHHH-HHHHHHHHHHhc--CCchHHhhhhhHHHHHHHHHHHHH-hcceeecccCccceEEccCCCEEeecccccce
Confidence 77888888 334444454433 479999999999999999999987 47899999999999999999999999999876
Q ss_pred cccCCcceeeeccCCCCCCCCCccccc----CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHH-hhhcccchhhc
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL-VVEQEVPVREV 407 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~-~~~~~~~~~~~ 407 (455)
...+.. .+...|-+.|||||.+. ..|+.++|||||||+|+||.||+.||.+.+....... +.+++. ..
T Consensus 242 lvdSkA----htrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~eP---P~ 314 (391)
T KOG0983|consen 242 LVDSKA----HTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEP---PL 314 (391)
T ss_pred eecccc----cccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCC---CC
Confidence 654432 34568999999999763 3578899999999999999999999998774433322 222221 22
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
++...+ .+..+.+|+..||..|+.+||...++++
T Consensus 315 L~~~~g------FSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 315 LPGHMG------FSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CCcccC------cCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 222222 4556899999999999999999988765
No 309
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3e-36 Score=294.98 Aligned_cols=260 Identities=22% Similarity=0.309 Sum_probs=188.4
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|..+ +++.||||++........ ....+.+|++++++++||||+++++++..
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 82 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEG-----------FPITALREIKILQLLKHENVVNLIEICRT 82 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCC-----------chhHHHHHHHHHHhCCCCCccceEEEEec
Confidence 345589999999999999986 488999999864322110 02236689999999999999999997754
Q ss_pred -c--------eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 251 -I--------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 -~--------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
. ..++||||+. ++|.+.+.... ..+++.+++.++.|++.||.|||+ ++++|+||||+||+++.++.
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~ 157 (310)
T cd07865 83 KATPYNRYKGSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHR--NKILHRDMKAANILITKDGI 157 (310)
T ss_pred ccccccCCCceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHEEECCCCc
Confidence 2 3489999995 58888876532 368999999999999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcc-eeeeccCCCCCCCCCcccccCC--CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhh
Q psy5603 322 PKLGDFGIVKMSETSNMK-TMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~--~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
+||+|||++......... ........++..|+|||.+.+. ++.++|+||||+++|||+||.+||.............
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~ 237 (310)
T cd07865 158 LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237 (310)
T ss_pred EEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 999999998765433211 1112345678899999976443 5789999999999999999999998765321111111
Q ss_pred h--cccc---hhhc-----cch---------hc-cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 E--QEVP---VREV-----LDK---------EA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~--~~~~---~~~~-----~d~---------~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ...+ .+.. .+. .. ...........+.++|.+||..+|.+||+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 238 QLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred HHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1 0000 0000 000 00 00000011234678999999999999999999874
No 310
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.3e-36 Score=288.53 Aligned_cols=244 Identities=20% Similarity=0.302 Sum_probs=186.5
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHH-hhCCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTL-SQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||+|... +|+.||||++....... ......+..|..++ ...+|+|++++++++.. ..
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~----------~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~ 71 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA----------KNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDY 71 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH----------HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCe
Confidence 56999999999999985 47899999986432100 00022244555444 45589999999998876 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+|+||+++++|.+++... .++++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+++.
T Consensus 72 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 146 (260)
T cd05611 72 LYLVMEYLNGGDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQ--RGIIHRDIKPENLLIDQTGHLKLTDFGLSRN 146 (260)
T ss_pred EEEEEeccCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCcEEEeeccccee
Confidence 89999999999999999763 468999999999999999999999 8899999999999999999999999998875
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
... .....|+..|+|||.+.+ .++.++||||||+++|+|++|..||.....................
T Consensus 147 ~~~-------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 214 (260)
T cd05611 147 GLE-------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPE----- 214 (260)
T ss_pred ccc-------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCC-----
Confidence 432 224568899999997654 4688999999999999999999999876543332222211111100
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
.....++..+.+++.+|+..+|++||++.++.+.|
T Consensus 215 ---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 215 ---EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ---cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 01113455688999999999999999876665544
No 311
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.1e-36 Score=290.84 Aligned_cols=245 Identities=22% Similarity=0.281 Sum_probs=187.7
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||+||++..+ +|+.||+|.+........ .....+.+|++++++++||||+++++.+.. +..|+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 70 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKR----------KGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCL 70 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhh----------hhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEE
Confidence 699999999999876 488999999864321100 113447789999999999999999987766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++++|.+++..... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~ 147 (277)
T cd05577 71 VMTLMNGGDLKYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQ--RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG 147 (277)
T ss_pred EEecCCCCcHHHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEECCCCCEEEccCcchhhhcc
Confidence 9999999999999976442 468999999999999999999999 8899999999999999999999999999876543
Q ss_pred CCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccC
Q psy5603 336 SNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. ......|+..|+|||.+. +.++.++|+|||||++|+|++|..||.................. .. .
T Consensus 148 ~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------~~-~ 215 (277)
T cd05577 148 GK----KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-------MA-V 215 (277)
T ss_pred CC----ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-------cc-c
Confidence 21 122346788999999664 45788999999999999999999999765431111111110000 00 0
Q ss_pred CChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 415 WNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
..+...+..+.++|.+||..+|.+|| ++.++++
T Consensus 216 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 216 EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 01112345578899999999999999 5555653
No 312
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.5e-36 Score=295.13 Aligned_cols=257 Identities=23% Similarity=0.319 Sum_probs=191.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++ +|+.||+|+++........ ...+.+|+.++++++|+||+++++++.+
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~-----------~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 77 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGI-----------PISSLREITLLLNLRHPNIVELKEVVVG 77 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCC-----------cchhhHHHHHHHhCCCCCCcceEEEEec
Confidence 345589999999999999986 4899999998754321110 1235679999999999999999997754
Q ss_pred ---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...++||||+. ++|.+++.... ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~kL~df 152 (309)
T cd07845 78 KHLDSIFLVMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHE--NFIIHRDLKVSNLLLTDKGCLKIADF 152 (309)
T ss_pred CCCCeEEEEEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCCEEECcc
Confidence 45799999995 58888887533 468999999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccch
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPV 404 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~ 404 (455)
|++........ ......++..|+|||.+.+ .++.++|+|||||++|||++|.+||...+.......... ...+.
T Consensus 153 g~~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~ 229 (309)
T cd07845 153 GLARTYGLPAK---PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPN 229 (309)
T ss_pred ceeeecCCccC---CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 99886543321 1122345788999997643 468899999999999999999999987664333222221 00000
Q ss_pred hhcc------------chhccCCC-----hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVL------------DKEAGEWN-----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~------------d~~~~~~~-----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.... ........ ....+..+.++|.+|+..||++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 230 ESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 00000000 0113456788999999999999999999875
No 313
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=2.1e-36 Score=300.19 Aligned_cols=259 Identities=20% Similarity=0.325 Sum_probs=193.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+ +|..||+|++........ ....+.+|+.++++++||||+++++++..
T Consensus 7 y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 75 (334)
T cd07855 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPT-----------LAKRTLRELKILRHFKHDNIIAIRDILRP 75 (334)
T ss_pred eeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccccc-----------chHHHHHHHHHHHhcCCCCccCHHHhccc
Confidence 345589999999999999976 489999999864322110 13457789999999999999999986632
Q ss_pred -----ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 251 -----IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 251 -----~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
...++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+ ++++||||||+||++++++.+||+
T Consensus 76 ~~~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~--~~ivH~dlkp~Nil~~~~~~~kl~ 149 (334)
T cd07855 76 PGADFKDVYVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHS--ANVIHRDLKPSNLLVNEDCELRIG 149 (334)
T ss_pred cCCCCceEEEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEec
Confidence 46789999994 689998875 3459999999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcc-eeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cc
Q psy5603 326 DFGIVKMSETSNMK-TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 326 DFGla~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
|||++......... ........|+..|+|||.+.+ .++.++|||||||++|||++|.+||...+.......... ..
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g 229 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC
Confidence 99998765432211 111234578999999997643 478899999999999999999999987653222111111 11
Q ss_pred cchhh------------ccchhc--cCCC----hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 402 VPVRE------------VLDKEA--GEWN----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~------------~~d~~~--~~~~----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+... ..+... ...+ ....+..+.++|.+||..+|++||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 230 SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred CChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 11101 110000 0000 0123566899999999999999999999876
No 314
>KOG0596|consensus
Probab=100.00 E-value=4.9e-37 Score=302.33 Aligned_cols=248 Identities=23% Similarity=0.254 Sum_probs=192.1
Q ss_pred CCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
.|++.++||+||-+.||++...+.+.||+|++..... + ......|.+|+..|.++ .|.+||.+++|-.
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~------D-----~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv 430 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEA------D-----NQTLDGYRNEIALLNKLKGHDKIIQLYDYEV 430 (677)
T ss_pred hhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhc------C-----HHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence 3577899999999999999987778899988753322 1 22367799999999999 5999999999976
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
. +.+|+||||= ..+|..+|..... ....| .+..+..|++.++.++|. +||||.||||+|+|+- .|.+||+|||
T Consensus 431 ~d~~lYmvmE~G-d~DL~kiL~k~~~-~~~~~-~lk~ywkqML~aV~~IH~--~gIVHSDLKPANFLlV-kG~LKLIDFG 504 (677)
T KOG0596|consen 431 TDGYLYMVMECG-DIDLNKILKKKKS-IDPDW-FLKFYWKQMLLAVKTIHQ--HGIVHSDLKPANFLLV-KGRLKLIDFG 504 (677)
T ss_pred cCceEEEEeecc-cccHHHHHHhccC-CCchH-HHHHHHHHHHHHHHHHHH--hceeecCCCcccEEEE-eeeEEeeeec
Confidence 6 8899999975 6799999987554 23334 888999999999999999 8899999999999985 4699999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC------------CCCcccchHHHHHHHHHHHcCCCCCCCCc-chhhHH
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------------QISTKTDVFSYGVILLELLTGMKPIDDNN-TILYYY 395 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------------~~~~~sDv~SlGvvl~elltG~~p~~~~~-~~~~~~ 395 (455)
+|....... ........+||+.||+||++.. +.+.+|||||||||||+|+.|++||.... ......
T Consensus 505 IA~aI~~DT-TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~ 583 (677)
T KOG0596|consen 505 IANAIQPDT-TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLH 583 (677)
T ss_pred hhcccCccc-cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHH
Confidence 998776553 3445567799999999997731 15679999999999999999999998654 222222
Q ss_pred Hhhhccc--chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 396 LVVEQEV--PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~--~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+..... .+++. ++ ...+.+++++||..||++||++.++++
T Consensus 584 aI~~P~~~Iefp~~--------~~---~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 584 AITDPNHEIEFPDI--------PE---NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred hhcCCCccccccCC--------CC---chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2211111 11111 11 111778899999999999999999985
No 315
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=5.8e-36 Score=288.94 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=188.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|++.++||+|+||.||+|..+ +++.||+|+++....... .....+|+.++.++. |+|++++++++.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~------------~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 68 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE------------QVNNLREIQALRRLSPHPNILRLIEVLF 68 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch------------hhhHHHHHHHHhhcCCCCCccceEEEEe
Confidence 345688999999999999976 478999999865322100 112457888998885 999999999765
Q ss_pred C---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 250 N---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 250 ~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
+ +..++|+||+. |+|.+.+.... ..+++..++.++.|++.||.|||+ .+++||||||+||+++. +.+||+|
T Consensus 69 ~~~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~--~~i~H~dl~p~ni~l~~-~~~kl~d 142 (282)
T cd07831 69 DRKTGRLALVFELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHR--NGIFHRDIKPENILIKD-DILKLAD 142 (282)
T ss_pred cCCCCcEEEEEecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHH--CCceecccCHHHEEEcC-CCeEEEe
Confidence 4 57799999996 68888876532 368999999999999999999999 88999999999999999 9999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccc-c-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccc
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-H-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVP 403 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~ 403 (455)
||+++....... .....++..|+|||.+ . +..+.++|+|||||++|||++|.+||...+.......... ....
T Consensus 143 fg~~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07831 143 FGSCRGIYSKPP----YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTP 218 (282)
T ss_pred cccccccccCCC----cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCC
Confidence 999876543221 1234688999999955 3 3468899999999999999999999987653222111111 0000
Q ss_pred hhh---ccchh-cc--CCC----------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 VRE---VLDKE-AG--EWN----------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 ~~~---~~d~~-~~--~~~----------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ..... .. .++ ...++..+.++|.+||..+|++||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 219 DAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred CHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000 00000 00 000 1234577899999999999999999999875
No 316
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6.2e-36 Score=290.18 Aligned_cols=241 Identities=25% Similarity=0.409 Sum_probs=191.2
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|..+ +++.||+|++..... . ....+.+|+.++++++||||+++++++.. ...
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~------~-------~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~ 91 (285)
T cd06648 25 VKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ------Q-------RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDEL 91 (285)
T ss_pred eEeccCCCeEEEEEEECCCCCEEEEEEEeccch------h-------HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeE
Confidence 78999999999999975 578999998853211 0 13447899999999999999999997766 888
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+|+||+++++|.+++.. .++++..+..++.|++.||.|||+ ++++||||+|+||+++.++.++|+|||++...
T Consensus 92 ~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~--~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~ 165 (285)
T cd06648 92 WVVMEFLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLHA--QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQV 165 (285)
T ss_pred EEEEeccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCChhhEEEcCCCcEEEcccccchhh
Confidence 999999999999999876 358999999999999999999999 88999999999999999999999999987754
Q ss_pred ccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
..... ......|+..|+|||.+.+ .++.++|+|||||++|||++|..||...+.............+ ..
T Consensus 166 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~--~~----- 235 (285)
T cd06648 166 SKEVP---RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPP--KL----- 235 (285)
T ss_pred ccCCc---ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCC--CC-----
Confidence 43211 1233568999999997644 5788999999999999999999999876543222222111100 00
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ....++..+.+++.+||..+|++||++.++++
T Consensus 236 ~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 K--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred c--ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 0 01123456889999999999999999999985
No 317
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=7.9e-36 Score=295.36 Aligned_cols=258 Identities=18% Similarity=0.276 Sum_probs=189.6
Q ss_pred CccCcC--CCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 176 NKLGEG--QFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 176 ~~LG~G--~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
..||+| +||+||++.+. +|+.||||++..... .. ...+.+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~------~~-----~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~ 72 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC------TE-----EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS 72 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC------CH-----HHHHHHHHHHHHHHhCCCCCcceEeeeEecCC
Confidence 456777 99999999986 589999999864321 10 114568899999999999999999998877 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+|+||+.+++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++++||+.+.
T Consensus 73 ~~~~v~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~--~~ivHrDlkp~Nill~~~~~~~~~~~~~~~ 149 (328)
T cd08226 73 WLWVISPFMAYGSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQ--NGYIHRNIKASHILISGDGLVSLSGLSHLY 149 (328)
T ss_pred ceEEEEecccCCCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEeCCCcEEEechHHHh
Confidence 8899999999999999987643 2358999999999999999999999 889999999999999999999999998654
Q ss_pred ccccCCcce----eeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 332 MSETSNMKT----MYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 332 ~~~~~~~~~----~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
......... .......++..|+|||++.+ .++.++|||||||++|||++|..||...................
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 229 (328)
T cd08226 150 SLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYS 229 (328)
T ss_pred hhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCC
Confidence 332211100 00112245677999997754 36789999999999999999999998765322211111000000
Q ss_pred h-----------------------------------hccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 R-----------------------------------EVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~-----------------------------------~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ ...+..........++..+.+|+.+||..||++||++.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 230 PLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred CccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0 000000111112345667889999999999999999999974
No 318
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.6e-36 Score=286.18 Aligned_cols=248 Identities=26% Similarity=0.362 Sum_probs=193.9
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|..+. |..||+|.+....... .....+.+|++++++++|+||+++++.+.+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~ 70 (257)
T cd08225 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-----------KEKEASKKEVILLAKMKHPNIVTFFASFQE 70 (257)
T ss_pred ceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-----------hhhHHHHHHHHHHHhCCCCChhhhhheecc
Confidence 3455889999999999999874 7889999986532110 013457899999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC-ceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFG 328 (455)
...++|+||+++++|.+++.... ...+++..+..++.|++.||.|||+ .+++|+||||+||++++++ .+||+|||
T Consensus 71 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~--~~i~H~dl~~~nil~~~~~~~~~l~d~~ 147 (257)
T cd08225 71 NGRLFIVMEYCDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHD--RKILHRDIKSQNIFLSKNGMVAKLGDFG 147 (257)
T ss_pred CCeEEEEEecCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHH--CCcccccCCHHHEEEcCCCCeEEecccc
Confidence 78899999999999999997643 3468999999999999999999999 8899999999999999886 56999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
.+........ ......|+..|+|||.+. +.++.++|+||||+++|||++|..||................ .
T Consensus 148 ~~~~~~~~~~---~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~--- 219 (257)
T cd08225 148 IARQLNDSME---LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY--F--- 219 (257)
T ss_pred cchhccCCcc---cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc--C---
Confidence 9876543221 122346899999999664 467889999999999999999999998655322222111111 0
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. .....+..+.+++.+||..+|++||++.++++
T Consensus 220 -~~-----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 220 -AP-----ISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -CC-----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 00 01123445888999999999999999999975
No 319
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.2e-36 Score=289.17 Aligned_cols=247 Identities=28% Similarity=0.382 Sum_probs=193.1
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+..+.||+|+||.||++.++ +++.||+|.+...... .....+.+|++++++++||||+++++++..
T Consensus 4 ~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 71 (265)
T cd06605 4 EYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE------------AIQKQILRELDILHKCNSPYIVGFYGAFYNN 71 (265)
T ss_pred hHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh------------HHHHHHHHHHHHHHHCCCCchhhhheeeecC
Confidence 34478999999999999987 4789999998654220 114558899999999999999999998766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||+++++|.+++.... .++++..+..++.|++.||.|||+. .+++||||||+||+++.++.++|+|||.+
T Consensus 72 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~-~~i~H~dl~~~ni~~~~~~~~~l~d~g~~ 148 (265)
T cd06605 72 GDISICMEYMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEK-HKIIHRDVKPSNILVNSRGQIKLCDFGVS 148 (265)
T ss_pred CEEEEEEEecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCC-CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 88899999999999999988642 4789999999999999999999982 46999999999999999999999999988
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcc---hhhHHHhhhcccchhh
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNT---ILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~---~~~~~~~~~~~~~~~~ 406 (455)
....... .....|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...+. ........
T Consensus 149 ~~~~~~~-----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-------- 215 (265)
T cd06605 149 GQLVNSL-----AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY-------- 215 (265)
T ss_pred hhhHHHH-----hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH--------
Confidence 7553221 112678899999996644 578899999999999999999999976531 11111100
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........+...++..+.++|.+|+..+|++||++.+++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 216 IVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 00000011111125556889999999999999999999875
No 320
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.5e-36 Score=291.80 Aligned_cols=248 Identities=26% Similarity=0.317 Sum_probs=186.2
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~~ 252 (455)
+.||+|+||.||++.+. +++.||+|++...... .....+.+|+.++.++. |+||+++++++.. ..
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~------------~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~ 77 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE------------KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGD 77 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccCh------------HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCc
Confidence 67999999999999986 4789999998643221 11455889999999996 9999999997766 77
Q ss_pred eEEEEEeccCCCHHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARV--NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
.+++|||+. ++|.++.... .....+++..+..++.+++.||+|||+. .+++||||||+||+++.++.+||+|||++
T Consensus 78 ~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~-~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 155 (288)
T cd06616 78 CWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE-LKIIHRDVKPSNILLDRNGNIKLCDFGIS 155 (288)
T ss_pred EEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-CCeeccCCCHHHEEEccCCcEEEeecchh
Confidence 789999985 5665543211 1135699999999999999999999972 38999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
+....... .....|+..|+|||.+.+ .++.++|||||||++|||++|..||................ ..+
T Consensus 156 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~- 229 (288)
T cd06616 156 GQLVDSIA----KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKG-DPP- 229 (288)
T ss_pred HHhccCCc----cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCC-CCC-
Confidence 76543221 123468999999997654 37889999999999999999999997654211111100000 000
Q ss_pred ccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 407 VLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 407 ~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........++..+.+|+.+|+..+|.+||++.+|++
T Consensus 230 ----~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 230 ----ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred ----cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0111111235566889999999999999999999876
No 321
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.8e-36 Score=291.65 Aligned_cols=244 Identities=27% Similarity=0.438 Sum_probs=192.4
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|... +++.||+|.+..... . ....+.+|+.++++++||||+++++++..
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~------~-------~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~ 88 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ------P-------KKELIINEILVMRENKHPNIVNYLDSYLVG 88 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc------h-------HHHHHHHHHHHHhhcCCCCeeehhheeeeC
Confidence 44588999999999999875 478899999853211 0 13458899999999999999999998866
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||+++++|.+++.. ..+++..+..++.+++.||.|||+ ++++||||||+||+++.++.+||+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~--~gi~H~dL~p~Nili~~~~~~kL~dfg~~ 162 (293)
T cd06647 89 DELWVVMEYLAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS--NQVIHRDIKSDNILLGMDGSVKLTDFGFC 162 (293)
T ss_pred CcEEEEEecCCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh--CCEeeccCCHHHEEEcCCCCEEEccCcce
Confidence 788999999999999999875 247899999999999999999999 88999999999999999999999999988
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
........ ......|++.|+|||.+ .+.++.++|+||||+++|++++|..||...+............
T Consensus 163 ~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~-------- 231 (293)
T cd06647 163 AQITPEQS---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-------- 231 (293)
T ss_pred eccccccc---ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC--------
Confidence 75443221 12345788999999965 4467889999999999999999999998654321111110000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.........++..+.+++.+||..+|.+||++.+++.
T Consensus 232 -~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 268 (293)
T cd06647 232 -TPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 268 (293)
T ss_pred -CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0001112234556889999999999999999999976
No 322
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6e-36 Score=292.06 Aligned_cols=257 Identities=24% Similarity=0.336 Sum_probs=189.9
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|.++ +|+.||||+++....... ....+.+|++++++++||||+++++++.+
T Consensus 10 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~-----------~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 10 DIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEG-----------FPITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred heeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccC-----------chHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 34489999999999999987 478999999875432111 12347789999999999999999997755
Q ss_pred c----------eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 251 I----------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 251 ~----------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
. ..|+|+||+++ +|.+.+... ...+++.++..++.|++.||+|||+ .+|+||||||+||++++++
T Consensus 79 ~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~--~~i~H~dl~p~nili~~~~ 153 (302)
T cd07864 79 QDALDFKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHK--KNFLHRDIKCSNILLNNKG 153 (302)
T ss_pred chhhhccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCC
Confidence 2 67999999975 777777653 3468999999999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVV 398 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~ 398 (455)
.+||+|||++.......... .....++..|+|||.+.+ ..+.++|||||||++|||++|++||.............
T Consensus 154 ~~kl~dfg~~~~~~~~~~~~--~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~ 231 (302)
T cd07864 154 QIKLADFGLARLYNSEESRP--YTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELIS 231 (302)
T ss_pred cEEeCcccccccccCCcccc--cccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence 99999999987654432111 122356788999996643 36889999999999999999999998665322211111
Q ss_pred h--cccc---hhhcc--------chhcc---C--CChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 E--QEVP---VREVL--------DKEAG---E--WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~--~~~~---~~~~~--------d~~~~---~--~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. .... .+... +.... . .....++..+.+++.+||..+|.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 232 RLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred HHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 0000 00000 00000 0 001123566889999999999999999999875
No 323
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.4e-35 Score=280.12 Aligned_cols=246 Identities=28% Similarity=0.420 Sum_probs=196.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|...+.||+|+||.||++.+. ++..|++|++..... .....+.+|+.++++++|+|++++++++..
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 68 (253)
T cd05122 2 FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-------------EKKEKIINEIQILKKCKHPNIVKYYGSYLK 68 (253)
T ss_pred ceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-------------hHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 345588999999999999986 578999999965322 014558899999999999999999997766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++++||+++++|.+++.... .++++..+..++.+++.||.+||+ .+++||||+|+||++++++.++|+|||.
T Consensus 69 ~~~~~l~~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~--~~i~h~dl~p~ni~i~~~~~~~l~d~~~ 144 (253)
T cd05122 69 KDELWIVMEFCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHS--NGIIHRDIKAANILLTSDGEVKLIDFGL 144 (253)
T ss_pred CCeEEEEEecCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhc--CCEecCCCCHHHEEEccCCeEEEeeccc
Confidence 78899999999999999987642 468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ .....|+..|+|||.+. +..+.++|+||||+++|+|++|..||...+.......... .......
T Consensus 145 ~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~ 218 (253)
T cd05122 145 SAQLSDTKA----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT--NGPPGLR 218 (253)
T ss_pred ccccccccc----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh--cCCCCcC
Confidence 876554321 23457889999999664 4568899999999999999999999987642221111111 1111111
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. ...++..+.++|.+|+..+|++||++.++++
T Consensus 219 ~-------~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 219 N-------PEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred c-------ccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 1112456888999999999999999999875
No 324
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.2e-35 Score=292.12 Aligned_cols=240 Identities=28% Similarity=0.398 Sum_probs=188.8
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|+.. +++.||+|++....... ......+.+|++++++++|||++++++++.+ ...
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 96 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT----------NEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTA 96 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCc----------hHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEE
Confidence 77999999999999975 47899999986432211 0113457889999999999999999998877 778
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+||||+. |+|.+.+.... .++++.++..++.|++.||.|||+ .|++||||+|+||+++.++.+||+|||++...
T Consensus 97 ~lv~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH~--~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~ 171 (313)
T cd06633 97 WLVMEYCL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHS--HNMIHRDIKAGNILLTEPGQVKLADFGSASKS 171 (313)
T ss_pred EEEEecCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCChhhEEECCCCCEEEeecCCCccc
Confidence 99999995 68888776533 468999999999999999999999 88999999999999999999999999987643
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc----CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
.. .....|+..|+|||.+. +.++.++|+|||||++|+|++|..||...+............. +.
T Consensus 172 ~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~--- 239 (313)
T cd06633 172 SP-------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PT--- 239 (313)
T ss_pred CC-------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CC---
Confidence 21 22457899999999763 4578899999999999999999999987653322222211111 00
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....++..+.+++.+||..+|.+||++.+++.
T Consensus 240 -----~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 240 -----LQSNEWTDSFRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred -----CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111123345888999999999999999999875
No 325
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5.4e-36 Score=299.61 Aligned_cols=254 Identities=22% Similarity=0.296 Sum_probs=190.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||+|+||.||+|... +|+.||||++...... . .....+.+|+.++++++||||+++++++.
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~------~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 85 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQN-----V------THAKRAYRELVLMKLVNHKNIIGLLNVFT 85 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccC-----h------hHHHHHHHHHHHHHhcCCCCCcceeeeec
Confidence 3455589999999999999976 5889999998532210 0 01344778999999999999999998764
Q ss_pred C-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
. ...|+||||+. ++|.+.+.. .++...+..++.|++.||.|||+ .|++||||||+||+++.++.+
T Consensus 86 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nil~~~~~~~ 157 (353)
T cd07850 86 PQKSLEEFQDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHS--AGIIHRDLKPSNIVVKSDCTL 157 (353)
T ss_pred cCCCccccCcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEECCCCCE
Confidence 3 24699999995 688888764 28899999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
||+|||+++...... ......||..|+|||.+. ..++.++|||||||++|+|++|..||...+.......... -
T Consensus 158 kL~Dfg~~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 233 (353)
T cd07850 158 KILDFGLARTAGTSF----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQL 233 (353)
T ss_pred EEccCccceeCCCCC----CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc
Confidence 999999988654322 122346889999999654 4678999999999999999999999986653222111111 0
Q ss_pred ccc--------------------------hhhccchhc----cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVP--------------------------VREVLDKEA----GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~--------------------------~~~~~d~~~----~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ +.+...... ........+..+.++|.+|+..||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 234 GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred CCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 000000000 00001234556789999999999999999999975
No 326
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=9.1e-36 Score=289.35 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=190.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|++.+.||+|+||.||++... +|..||+|++........ ......+.+|+.++.++ +|+||+++++
T Consensus 2 y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~---------~~~~~~~~~e~~~l~~l~~~~~i~~~~~ 72 (290)
T cd05613 2 FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK---------AKTTEHTRTERQVLEHIRQSPFLVTLHY 72 (290)
T ss_pred ceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc---------chHHHHHHHHHHHHHhcccCCChhceee
Confidence 345689999999999999863 578999999864322111 11134578899999999 5899999998
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
.+.. ...|+|+||+++++|.+++... .++++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+
T Consensus 73 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~--~~i~H~dl~p~nil~~~~~~~kl~ 147 (290)
T cd05613 73 AFQTDTKLHLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHK--LGIIYRDIKLENILLDSNGHVVLT 147 (290)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeEECCCCCEEEe
Confidence 7766 7779999999999999999863 468899999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|||+++........ ......|+..|+|||.+.+ ..+.++||||||+++|+|++|..||...............
T Consensus 148 dfg~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-- 223 (290)
T cd05613 148 DFGLSKEFHEDEVE--RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRR-- 223 (290)
T ss_pred eCccceeccccccc--ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHH--
Confidence 99998765432211 1234578999999997643 3578999999999999999999999754321110000000
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC-----CHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA-----SMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP-----s~~evl~ 447 (455)
+....... +..++..+.+++.+|+..+|.+|| ++.+++.
T Consensus 224 -----~~~~~~~~-~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 224 -----ILKSEPPY-PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred -----hhccCCCC-CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 00000001 122455688899999999999997 6666654
No 327
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-35 Score=334.41 Aligned_cols=248 Identities=23% Similarity=0.415 Sum_probs=189.5
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|.++ ++..||||+++.... ....|++++++++|||||+++++|.+ ...
T Consensus 696 ~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----------------~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~ 758 (968)
T PLN00113 696 NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----------------IPSSEIADMGKLQHPNIVKLIGLCRSEKGA 758 (968)
T ss_pred cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----------------ccHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence 78999999999999975 589999999853211 02346888999999999999999877 778
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
|+||||+++|+|.+++.. ++|..+..|+.|++.|++|||.. ..+|+||||||+||+++.++.+++. ||....
T Consensus 759 ~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~ 831 (968)
T PLN00113 759 YLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGL 831 (968)
T ss_pred EEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccc
Confidence 999999999999999963 89999999999999999999943 2689999999999999999988876 665443
Q ss_pred cccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcc---hhhHHHh-hhcccchhhc
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNT---ILYYYLV-VEQEVPVREV 407 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~---~~~~~~~-~~~~~~~~~~ 407 (455)
... .....||+.|+|||++. +.++.++|||||||++|||+||+.||+.... ....+.. ..........
T Consensus 832 ~~~-------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 904 (968)
T PLN00113 832 LCT-------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW 904 (968)
T ss_pred ccc-------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe
Confidence 221 11236889999999764 4689999999999999999999999964321 1111111 1112223334
Q ss_pred cchhccCC--ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 408 LDKEAGEW--NETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 408 ~d~~~~~~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
+|+..... ........+.+++.+|+..+|++||+|.||++.|+++..
T Consensus 905 ~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 905 IDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred eCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 44433211 112233456678889999999999999999999998764
No 328
>KOG3653|consensus
Probab=100.00 E-value=1.3e-36 Score=294.94 Aligned_cols=257 Identities=26% Similarity=0.399 Sum_probs=196.8
Q ss_pred CCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh--CCccceeeecccccC--
Q psy5603 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ--CKHVNLLRLLGLCNN-- 250 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~-- 250 (455)
...||+|.||.||+|.+. ++.||||++... ..+.|++|-.|.+- ++|+||++++++-..
T Consensus 215 ~eli~~Grfg~V~KaqL~-~~~VAVKifp~~----------------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t 277 (534)
T KOG3653|consen 215 LELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ----------------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT 277 (534)
T ss_pred HHHhhcCccceeehhhcc-CceeEEEecCHH----------------HHHHHHhHHHHHhccCccchhHHHhhchhccCC
Confidence 377999999999999998 599999998532 14568888888765 589999999997644
Q ss_pred ---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-------CCCeeecCCCCCcEEEcCCC
Q psy5603 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-------SKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-------~~~iiH~Dikp~NILl~~~~ 320 (455)
..++||++|.+.|||.++|.. ..++|....+|+..+++||+|||+. ..+|+|||||+.||||..++
T Consensus 278 ~~~~eywLVt~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~Dl 353 (534)
T KOG3653|consen 278 ADRMEYWLVTEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDL 353 (534)
T ss_pred ccccceeEEeeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCC
Confidence 378999999999999999986 3589999999999999999999972 35699999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccCCCC-------cccchHHHHHHHHHHHcCCCCCCC--Ccch
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQIS-------TKTDVFSYGVILLELLTGMKPIDD--NNTI 391 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-------~~sDv~SlGvvl~elltG~~p~~~--~~~~ 391 (455)
.+.|+|||+|......... ..+-.-+||.+|||||++.|..+ .+.||||+|.|||||++....++. ...+
T Consensus 354 TccIaDFGLAl~~~p~~~~-~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 354 TCCIADFGLALRLEPGKPQ-GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred cEEeeccceeEEecCCCCC-cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 9999999999877654322 22334699999999999977432 268999999999999997766642 1122
Q ss_pred hhHHHhhhcccc-h--------hhccchhc-cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 392 LYYYLVVEQEVP-V--------REVLDKEA-GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 392 ~~~~~~~~~~~~-~--------~~~~d~~~-~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
..-+..+.+..+ + .+-..+.. ..|......+.+.+.+..||.+||+-|.|+.=|.+++.++.
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~ 504 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELM 504 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence 221211111111 1 11111111 23334455678899999999999999999999988887654
No 329
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.4e-36 Score=285.03 Aligned_cols=249 Identities=28% Similarity=0.384 Sum_probs=195.8
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|++|.||+|..+. ++.||||++...... .....+.+|+.++.+++|+|++++++++..
T Consensus 4 ~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~------------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (264)
T cd06623 4 ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE------------EFRKQLLRELKTLRSCESPYVVKCYGAFYKE 71 (264)
T ss_pred eeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch------------HHHHHHHHHHHHHHhcCCCCeeeEEEEEccC
Confidence 345899999999999999874 899999998653221 114558999999999999999999998777
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||+++++|.+++... .++++..++.++.|++.|+.|||+. .+++||||+|+||+++.++.++|+|||++
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~-~~~~H~~l~~~ni~~~~~~~~~l~df~~~ 147 (264)
T cd06623 72 GEISIVLEYMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTK-RHIIHRDIKPSNLLINSKGEVKIADFGIS 147 (264)
T ss_pred CeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhcc-CCCccCCCCHHHEEECCCCCEEEccCccc
Confidence 7889999999999999999863 5699999999999999999999982 35999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
......... .....++..|+|||.+. +.++.++|+||||+++|+|+||..||.............. ...
T Consensus 148 ~~~~~~~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~-------~~~ 217 (264)
T cd06623 148 KVLENTLDQ---CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQA-------ICD 217 (264)
T ss_pred eecccCCCc---ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHH-------Hhc
Confidence 765433211 12456889999999664 4568899999999999999999999987642111111110 000
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......+...++..+.++|.+||..+|++||++.++++
T Consensus 218 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~ 255 (264)
T cd06623 218 GPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ 255 (264)
T ss_pred CCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 01111111124566889999999999999999999987
No 330
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=5.7e-36 Score=288.29 Aligned_cols=249 Identities=27% Similarity=0.408 Sum_probs=195.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
|.+.+.||+|+||.||+|..+ ++..||+|++........ .....+.+|+++++++. ||||+++++++.
T Consensus 3 y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~----------~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~ 72 (280)
T cd05581 3 FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKE----------KKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ 72 (280)
T ss_pred ceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccch----------HHHHHHHHHHHHHHhcccCCCchhHHHHhc
Confidence 455688999999999999986 589999999865322110 11345788999999998 999999999876
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+ ...++||||+++++|.+++... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||
T Consensus 73 ~~~~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~--~~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 73 DEENLYFVLEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHS--KGIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred CCceEEEEEcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCCCHHHeEECCCCCEEecCCc
Confidence 6 7889999999999999999873 369999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcc-----------------eeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcc
Q psy5603 329 IVKMSETSNMK-----------------TMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 329 la~~~~~~~~~-----------------~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~ 390 (455)
++......... ........|+..|+|||.+ ....+.++|+||||++++++++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~ 227 (280)
T cd05581 148 TAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE 227 (280)
T ss_pred cccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH
Confidence 98765433211 0122345688999999965 44578899999999999999999999987763
Q ss_pred hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCH----HHHHH
Q psy5603 391 ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASM----RDIVD 447 (455)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~----~evl~ 447 (455)
.............++ ..++..+.++|.+|+..+|.+||++ .++++
T Consensus 228 ~~~~~~~~~~~~~~~------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 228 YLTFQKILKLEYSFP------------PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHHHHHHHhcCCCCC------------CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 322222211111111 1234558889999999999999999 66653
No 331
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1e-35 Score=294.41 Aligned_cols=259 Identities=25% Similarity=0.339 Sum_probs=196.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||.|+||.||+|.... +..||||++....... ...+.+.+|+.+++.++|+||+++++++..
T Consensus 2 y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (330)
T cd07834 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDL-----------IDAKRILREIKLLRHLRHENIIGLLDILRP 70 (330)
T ss_pred ceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccc-----------hhhhhHHHHHHHHHhcCCcchhhhhhhhcc
Confidence 4566899999999999999864 8899999986532100 113458899999999999999999998766
Q ss_pred -c-----eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 251 -I-----MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 -~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
. ..|+||+|+. ++|.+++.. ..++++..++.++.+++.||.|||+ +|++||||||+||+++.++.++|
T Consensus 71 ~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~l~~~~~~~i~~~l~~~l~~LH~--~gi~H~dlkp~nili~~~~~~~L 144 (330)
T cd07834 71 PSPEDFNDVYIVTELME-TDLHKVIKS---PQPLTDDHIQYFLYQILRGLKYLHS--ANVIHRDLKPSNILVNSNCDLKI 144 (330)
T ss_pred cCcccccceEEEecchh-hhHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEE
Confidence 3 6799999996 589888876 3379999999999999999999999 88999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cc
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QE 401 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~ 401 (455)
+|||++.................+|..|+|||.+.+ .++.++|+||||+++|+|++|.+||...........+.. ..
T Consensus 145 ~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 224 (330)
T cd07834 145 CDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLG 224 (330)
T ss_pred cccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcC
Confidence 999998876543211112234568899999997644 468899999999999999999999987764332222211 01
Q ss_pred cchhh------------ccchhc----cCCC--hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 402 VPVRE------------VLDKEA----GEWN--ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~------------~~d~~~----~~~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+..+ .+.... ..+. ....+..+.++|.+||..+|.+||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 00000 000000 0000 0123456788999999999999999999987
No 332
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.5e-35 Score=285.66 Aligned_cols=246 Identities=27% Similarity=0.416 Sum_probs=195.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|+..+.||+|+||.||+|.++ ++..||+|++..... ....+.+|++.+++++|+|++++++++..
T Consensus 21 ~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--------------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 86 (286)
T cd06614 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--------------NKELIINEILIMKDCKHPNIVDYYDSYLV 86 (286)
T ss_pred chHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--------------hHHHHHHHHHHHHHCCCCCeeEEEEEEEE
Confidence 445589999999999999987 578999999864321 13458899999999999999999997766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+++++|.+++.... ..+++..+..++.+++.||.|||+ .|++|+||+|+||+++.++.++|+|||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~--~gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 87 GDELWVVMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHS--QNVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred CCEEEEEEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCChhhEEEcCCCCEEECccch
Confidence 88899999999999999998743 369999999999999999999999 8899999999999999999999999998
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+........ ......++..|+|||.+. ..++.++|+|||||++|+|++|..||...........+.... ...
T Consensus 163 ~~~~~~~~~---~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~-- 235 (286)
T cd06614 163 AAQLTKEKS---KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKG--IPP-- 235 (286)
T ss_pred hhhhccchh---hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC--CCC--
Confidence 765433211 123346888999999664 457889999999999999999999998665432222211111 000
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......++..+.++|.+|+..+|.+||++.++++
T Consensus 236 -----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 -----LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred -----CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0111224556889999999999999999999975
No 333
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.5e-35 Score=291.21 Aligned_cols=259 Identities=20% Similarity=0.205 Sum_probs=190.0
Q ss_pred CCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ce
Q psy5603 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~ 252 (455)
+++.+|.|+++.||++.. +++.||||+++..... ......+.+|++++++++|+||+++++++.+ ..
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~-----------~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 73 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCS-----------KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSE 73 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccc-----------hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCe
Confidence 445566667776776665 4899999999753210 0114568999999999999999999997766 78
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.+++|||+++|+|.+++.... ...+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.+||+|||.+..
T Consensus 74 ~~~~~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~--~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~ 150 (314)
T cd08216 74 LYVVSPLMAYGSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHS--KGFIHRSVKASHILLSGDGKVVLSGLRYSVS 150 (314)
T ss_pred EEEEEeccCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCcceEEEecCCceEEecCcccee
Confidence 899999999999999997643 2358899999999999999999999 8899999999999999999999999998865
Q ss_pred cccCCcc----eeeeccCCCCCCCCCcccccC---CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc---
Q psy5603 333 SETSNMK----TMYTENLTGTRPYMPPEAMHC---QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV--- 402 (455)
Q Consensus 333 ~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~---~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~--- 402 (455)
....... ........++..|+|||++.+ .++.++|+|||||++|||++|..||.................
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (314)
T cd08216 151 MIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCL 230 (314)
T ss_pred eccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccc
Confidence 4322111 111234567888999997754 468899999999999999999999986543221111100000
Q ss_pred ----chhh-----------ccchhc----cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 ----PVRE-----------VLDKEA----GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ----~~~~-----------~~d~~~----~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+. ..+... ...........+.+++.+||..+|.+||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 231 LDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 0000 000000 01112234556788999999999999999999976
No 334
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-35 Score=286.52 Aligned_cols=254 Identities=23% Similarity=0.356 Sum_probs=191.6
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 250 (455)
.+.+.||+|+||.||+|...+ ++.||||++....... . .....+|+..+.+++ |+|++++++++.+
T Consensus 2 ~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~--------~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 69 (283)
T cd07830 2 KVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW----E--------ECMNLREVKSLRKLNEHPNIVKLKEVFRE 69 (283)
T ss_pred eeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch----h--------HHHHHHHHHHHHhccCCCCchhHHHHhhc
Confidence 455889999999999999864 7889999986432210 0 123557899999999 9999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++||||+ +|+|.+.+.... ...+++.++..++.|++.||.|||+ ++++|+||+|+||++++++.++|+|||+
T Consensus 70 ~~~~~lv~e~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~--~~i~H~dl~~~ni~i~~~~~~~l~d~~~ 145 (283)
T cd07830 70 NDELYFVFEYM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHK--HGFFHRDLKPENLLVSGPEVVKIADFGL 145 (283)
T ss_pred CCcEEEEEecC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChhhEEEcCCCCEEEeeccc
Confidence 7889999999 899999887644 2468999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccc---
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVP--- 403 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~--- 403 (455)
+........ .....|+..|+|||.+. ..++.++|+||||++++||++|.+||.............. ...+
T Consensus 146 ~~~~~~~~~----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd07830 146 AREIRSRPP----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQ 221 (283)
T ss_pred ceeccCCCC----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChh
Confidence 876543221 12346888999999763 3468899999999999999999999976653322222111 0000
Q ss_pred -------hhhccchh--------ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 -------VREVLDKE--------AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 -------~~~~~d~~--------~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+.. .....+ .....+.++|.+||..+|++||++.|++.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 222 DWPEGYKLASKLGFRFPQFAPTSLHQLIP-NASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hhhhHhhhhccccccccccccccHHHHcc-cCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000000 000000 11355888999999999999999999875
No 335
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.4e-35 Score=286.62 Aligned_cols=257 Identities=25% Similarity=0.347 Sum_probs=191.9
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|+||.||+|...+ ++.||+|++....... . ....+.+|++++++++|+|++++++++.+
T Consensus 2 ~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~----~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 70 (287)
T cd07840 2 EKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKE----G-------FPITAIREIKLLQKLRHPNIVRLKEIVTSK 70 (287)
T ss_pred eeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccc----c-------chHHHHHHHHHHHhccCCCeeeheeeEecC
Confidence 455889999999999999874 7899999997653100 0 12347889999999999999999997754
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
+..++|+||++ ++|.+++.... ..+++.+++.++.|++.||.|||+ .+++|+||||+||++++++.+||+|||
T Consensus 71 ~~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~--~~~~h~dl~p~nil~~~~~~~~l~d~g 145 (287)
T cd07840 71 GKGSIYMVFEYMD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHS--NGILHRDIKGSNILINNDGVLKLADFG 145 (287)
T ss_pred CCCcEEEEecccc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHH--CCceeccCcHHHeEEcCCCCEEEcccc
Confidence 47899999996 58988887532 468999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cccc-
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVP- 403 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~- 403 (455)
++......... ......++..|+|||.+.+ .++.++||||||+++|||+||..||.............. ....
T Consensus 146 ~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~ 223 (287)
T cd07840 146 LARPYTKRNSA--DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTD 223 (287)
T ss_pred ceeeccCCCcc--cccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCch
Confidence 98866543211 1223467888999996543 468899999999999999999999987663222111111 0000
Q ss_pred --hhhccc--------------hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 404 --VREVLD--------------KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 404 --~~~~~d--------------~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.....+ ..........++..+.+++.+|+..+|.+||++.++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 224 ENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000 00000000112456788999999999999999999875
No 336
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=6.7e-36 Score=289.99 Aligned_cols=256 Identities=22% Similarity=0.236 Sum_probs=193.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc----CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK----NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~----~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|++.+.||+|+||.||++... +++.||||+++...... .......+.+|++++.++ +||||+++++
T Consensus 2 ~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~---------~~~~~~~~~~E~~~l~~~~~~~~i~~~~~ 72 (288)
T cd05583 2 FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQ---------KAKTAEHTRTERQVLEAVRRCPFLVTLHY 72 (288)
T ss_pred ceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHh---------hhhHHHHHHHHHHHHHhccCCcchhhhhe
Confidence 345588999999999999853 46889999986432210 011234588999999999 5999999998
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEe
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLG 325 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~ 325 (455)
.+.. ...|+||||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+++||||||.||+++.++.++|+
T Consensus 73 ~~~~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~--~~~~H~dl~p~nil~~~~~~~~l~ 147 (288)
T cd05583 73 AFQTDTKLHLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQ--LGIIYRDIKLENILLDSEGHVVLT 147 (288)
T ss_pred eeecCCEEEEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHH--CCeeccCCCHHHeEECCCCCEEEE
Confidence 7666 7889999999999999998763 358999999999999999999999 889999999999999999999999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccCC---CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ---ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
|||+++....... .......|+..|+|||.+.+. .+.++|+||||+++|||++|..||...............
T Consensus 148 dfg~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~-- 223 (288)
T cd05583 148 DFGLSKEFLAEEE--ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRR-- 223 (288)
T ss_pred ECccccccccccc--cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHH--
Confidence 9999876543321 112345789999999976443 578999999999999999999999644321111110000
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHh
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSK 451 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~ 451 (455)
..... ...+..++..+.+++.+|+..+|++||++.+|.+.|+.
T Consensus 224 ----~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 224 ----ILKSK--PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ----HHccC--CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 00000 00112234557889999999999999999888776653
No 337
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.6e-36 Score=290.48 Aligned_cols=258 Identities=21% Similarity=0.297 Sum_probs=189.9
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|.++ +|+.||+|++....... .....+.+|++++++++||||+++++++.+
T Consensus 4 y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (294)
T PLN00009 4 YEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-----------GVPSTAIREISLLKEMQHGNIVRLQDVVHS 72 (294)
T ss_pred eEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-----------cchHHHHHHHHHHHhccCCCEeeEEEEEec
Confidence 445589999999999999986 58899999986432210 012347889999999999999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-CCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~DFG 328 (455)
...|+||||++ ++|.+.+.... ...+++..+..++.|++.||+|||+ ++++||||||+||+++. ++.+||+|||
T Consensus 73 ~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 73 EKRLYLVFEYLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHS--HRVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred CCeEEEEEeccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHh--CCeeCCCCCcceEEEECCCCEEEEcccc
Confidence 88899999995 68888876533 2346888999999999999999999 88999999999999985 5679999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~ 405 (455)
++....... .......|++.|+|||.+.+ .++.++|||||||++|+|+||.+||.............. ...+..
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (294)
T PLN00009 149 LARAFGIPV---RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNE 225 (294)
T ss_pred cccccCCCc---cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 987543321 11123467889999997644 468899999999999999999999987653222221111 001111
Q ss_pred hccc---------hhccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 EVLD---------KEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~~~d---------~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+ .....+. ....+..+.+++.+|+..+|++||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 226 ETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 0000000 1123445788999999999999999999875
No 338
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.6e-35 Score=288.79 Aligned_cols=266 Identities=15% Similarity=0.132 Sum_probs=180.8
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhh-hhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTE-AAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
.|++.++||+|+||.||+|.+.+ +..+|+|+....... ...+.. ...........+...+..+.|+|+++++
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENET---IVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCc---hhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 35677999999999999999764 345566654322110 000000 0000111233444556678999999999
Q ss_pred ccccCc-----eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 246 GLCNNI-----MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 246 ~~~~~~-----~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+.+... ..+++++++ ..++.+.+... ...++..+..++.|++.||.|||+ ++++||||||+|||++.++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~--~~iiHrDiKp~Nill~~~~ 163 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKL-VENTKEIFKRI---KCKNKKLIKNIMKDMLTTLEYIHE--HGISHGDIKPENIMVDGNN 163 (294)
T ss_pred EeeeEecCCceEEEEEEehh-ccCHHHHHHhh---ccCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCC
Confidence 865432 336777776 45777766542 246788899999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcc----eeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch-hhH
Q psy5603 321 VPKLGDFGIVKMSETSNMK----TMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYY 394 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~----~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~-~~~ 394 (455)
.++|+|||+++........ ........||+.|+|||+..+ .++.++|||||||++|||++|..||...... ...
T Consensus 164 ~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~ 243 (294)
T PHA02882 164 RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLI 243 (294)
T ss_pred cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHH
Confidence 9999999999865432211 011233579999999997654 5789999999999999999999999876321 111
Q ss_pred HHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 395 YLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 395 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
...... -+........ ....++..+.+++..|+..+|++||++.++.+.|+
T Consensus 244 ~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 244 HAAKCD--FIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHhHHH--HHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 110000 0001111110 11223566889999999999999999999998763
No 339
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.1e-35 Score=291.08 Aligned_cols=260 Identities=23% Similarity=0.326 Sum_probs=188.5
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||+|.++ +++.||||++......... ...+.+|++++++++||||+++++++.+
T Consensus 10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~-----------~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (311)
T cd07866 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGF-----------PITALREIKILKKLKHPNVVPLIDMAVE 78 (311)
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCc-----------chhHHHHHHHHHhcCCCCccchhhheec
Confidence 455689999999999999986 4789999998654321111 1236789999999999999999986533
Q ss_pred ---------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 251 ---------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 ---------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
...++|++|+. ++|...+... ...+++.++..++.|++.||.|||+ ++++||||||+||++++++.
T Consensus 79 ~~~~~~~~~~~~~lv~~~~~-~~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~--~~i~H~dl~p~nil~~~~~~ 153 (311)
T cd07866 79 RPDKSKRKRGSVYMVTPYMD-HDLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHE--NHILHRDIKAANILIDNQGI 153 (311)
T ss_pred ccccccccCceEEEEEecCC-cCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCC
Confidence 24689999995 5777777643 3469999999999999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcce--------eeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcch
Q psy5603 322 PKLGDFGIVKMSETSNMKT--------MYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~--------~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~ 391 (455)
+||+|||+++......... .......|++.|+|||.+.+ .++.++|||||||++|||++|.+||.+....
T Consensus 154 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~ 233 (311)
T cd07866 154 LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI 233 (311)
T ss_pred EEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9999999987654322111 11123467889999996643 4688999999999999999999999876532
Q ss_pred hhHHHhhh--cccc---------hhhccchhc-cCCCh------hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 392 LYYYLVVE--QEVP---------VREVLDKEA-GEWNE------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 392 ~~~~~~~~--~~~~---------~~~~~d~~~-~~~~~------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
........ .... +....+... ...+. ......+.++|.+||..+|.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 234 DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 21111111 0000 000000000 00000 112245778999999999999999999874
No 340
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.6e-35 Score=285.82 Aligned_cols=256 Identities=23% Similarity=0.309 Sum_probs=194.5
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
++.+.||+|++|.||+|... +++.+|+|++....... .....+.+|++++++++|+||+++++++.+
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 70 (283)
T cd05118 2 QKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-----------GIPKTALREIKLLKELNHPNIIKLLDVFRHK 70 (283)
T ss_pred ccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-----------hhHHHHHHHHHHHHHhcCCCcchHHHhhccC
Confidence 44578999999999999976 58899999986543211 113457889999999999999999998776
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||++ ++|.+.+.... .++++.+++.++.+++.||.|||+ .+++|+||||+||+++.++.+||+|||.+
T Consensus 71 ~~~~~v~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~dl~p~nili~~~~~~~l~df~~~ 145 (283)
T cd05118 71 GDLYLVFEFMD-TDLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHS--HGILHRDLKPENLLINTEGVLKLADFGLA 145 (283)
T ss_pred CCEEEEEeccC-CCHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHH--CCeeecCcCHHHEEECCCCcEEEeeeeee
Confidence 78899999996 58888887643 478999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchh--
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR-- 405 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~-- 405 (455)
....... . ......++..|+|||.+.+ ..+.++|+||||+++|+|+||+.||...+.......... ......
T Consensus 146 ~~~~~~~-~--~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (283)
T cd05118 146 RSFGSPV-R--PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEV 222 (283)
T ss_pred EecCCCc-c--cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHh
Confidence 7665432 1 1223468889999996643 468899999999999999999999977663322222111 000000
Q ss_pred --hccc---------hhccCC----ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 --EVLD---------KEAGEW----NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 --~~~d---------~~~~~~----~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+ +..... ....++..+.++|.+|+..+|.+||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 223 WPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred cccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 0000 000000 01235667889999999999999999999875
No 341
>KOG0696|consensus
Probab=100.00 E-value=1.3e-36 Score=289.81 Aligned_cols=235 Identities=28% Similarity=0.372 Sum_probs=193.7
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
..||+|+||.|-+|..++ ...+|||+++++........ +. -..|-++|.-. +-|.++.+...++. +.
T Consensus 355 ~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDv---ec-------tm~EKrvLAL~~kppFL~qlHScFQTmDR 424 (683)
T KOG0696|consen 355 MVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDV---EC-------TMVEKRVLALPGKPPFLVQLHSCFQTMDR 424 (683)
T ss_pred EEeccCccceeeeecccCcchhhhhhhhccceeeecCcc---cc-------eehhhhheecCCCCchHHHHHHHhhhhhh
Confidence 889999999999999874 56799999998876544322 12 23466677665 45788888888888 89
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
+|+||||+.||+|...++..+ .+-++.+..++.+||-||-|||+ +|||+||||.+|||||.+|++||+|||+++.
T Consensus 425 LyFVMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~--kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKE 499 (683)
T KOG0696|consen 425 LYFVMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHS--KGIIYRDLKLDNVMLDSEGHIKIADFGMCKE 499 (683)
T ss_pred eeeEEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhc--CCeeeeeccccceEeccCCceEeeecccccc
Confidence 999999999999999998754 48888999999999999999999 9999999999999999999999999999986
Q ss_pred cccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
.-... ..+.+++||+.|+|||++ ...|+.++|+|||||+||||+.|++||++.+.......+.+....+++.+...
T Consensus 500 ni~~~---~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkE 576 (683)
T KOG0696|consen 500 NIFDG---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKE 576 (683)
T ss_pred cccCC---cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHH
Confidence 54432 235678999999999965 44678899999999999999999999999998888877776666665554443
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCC
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
...+....+...|.+|.
T Consensus 577 ------------Av~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 577 ------------AVAICKGLLTKHPGKRL 593 (683)
T ss_pred ------------HHHHHHHHhhcCCcccc
Confidence 45556777888888884
No 342
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.3e-35 Score=279.72 Aligned_cols=246 Identities=26% Similarity=0.415 Sum_probs=196.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|++|.||+|..+ +++.||+|.+...... ......+.+|++++++++|||++++++++.+
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (254)
T cd06627 2 YQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK-----------EEALKSIMQEIDLLKNLKHPNIVKYIGSIET 70 (254)
T ss_pred ceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC-----------HHHHHHHHHHHHHHHhCCCCCccEEEEEEEe
Confidence 455689999999999999876 4789999999754321 0114568999999999999999999998766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...++|+||+.+++|.+++... .++++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||+
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~--~~i~H~dl~p~ni~i~~~~~~~l~d~~~ 145 (254)
T cd06627 71 SDSLYIILEYAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHE--QGVIHRDIKAANILTTKDGVVKLADFGV 145 (254)
T ss_pred CCEEEEEEecCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCHHHEEECCCCCEEEecccc
Confidence 7889999999999999998763 469999999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhcc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVL 408 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~ 408 (455)
+......... .....|+..|+|||...+ ..+.++|+||||+++|+|++|..||................. .
T Consensus 146 ~~~~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~--- 217 (254)
T cd06627 146 ATKLNDVSKD---DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH--P--- 217 (254)
T ss_pred ceecCCCccc---ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC--C---
Confidence 8866543211 234578889999996543 467899999999999999999999986553222221111100 0
Q ss_pred chhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 409 DKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 409 d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..++..+.+++.+||..+|++||++.+++.
T Consensus 218 ------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 ------PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ------CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 011223456888999999999999999999874
No 343
>KOG0986|consensus
Probab=100.00 E-value=4.5e-37 Score=296.21 Aligned_cols=242 Identities=24% Similarity=0.306 Sum_probs=192.1
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
++||+||||.||-+..+ +|+.||.|++.++..... .......+|-++|.++..+.||.+--.+.. +.+
T Consensus 191 RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr----------~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~L 260 (591)
T KOG0986|consen 191 RVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKR----------KGETMALNEKQILEKVSSPFIVSLAYAFETKDAL 260 (591)
T ss_pred EEEecccccceeEEEEecchhhHHHHHHHHHHHHHh----------hhhHHhhHHHHHHHHhccCcEEEEeeeecCCCce
Confidence 88999999999998876 599999999976544211 113447889999999999999998766666 899
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
|+|+..|.||+|.-+|...+. +.+++..+..++.+|+.||++||+ ..||+||+||+|||||+.|+++|+|+|||...
T Consensus 261 ClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~--~~iVYRDLKPeNILLDd~GhvRISDLGLAvei 337 (591)
T KOG0986|consen 261 CLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHR--RRIVYRDLKPENILLDDHGHVRISDLGLAVEI 337 (591)
T ss_pred EEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHh--cceeeccCChhheeeccCCCeEeeccceEEec
Confidence 999999999999999887663 789999999999999999999999 88999999999999999999999999999987
Q ss_pred ccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
...... ...+||.+|||||++ .+.|+...|+|||||+||||+.|+.||...........+... . .-++
T Consensus 338 ~~g~~~----~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr--~---~~~~-- 406 (591)
T KOG0986|consen 338 PEGKPI----RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRR--T---LEDP-- 406 (591)
T ss_pred CCCCcc----ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHH--H---hcch--
Confidence 765432 234899999999976 456889999999999999999999999865532222111100 0 0000
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
..+ ++..+...+++....|..||++|...
T Consensus 407 ~ey-~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 407 EEY-SDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hhc-ccccCHHHHHHHHHHHccCHHHhccC
Confidence 011 13455567888889999999998643
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.7e-35 Score=290.48 Aligned_cols=241 Identities=28% Similarity=0.422 Sum_probs=189.0
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|+||.||+|..+ ++..||+|.+....... . .....+.+|+++++.++|+|++++++++.+ ...
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 90 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQS----N------EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTA 90 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccC----h------HHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCee
Confidence 78999999999999986 47889999986422111 0 113457889999999999999999998776 778
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+. |+|.+.+... ..++++.++..++.|++.|+.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 91 ~lv~e~~~-~~l~~~~~~~--~~~l~~~~~~~~~~~l~~~l~~LH~--~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 165 (308)
T cd06634 91 WLVMEYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS--HNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165 (308)
T ss_pred EEEEEccC-CCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHhEEECCCCcEEECCcccceee
Confidence 99999996 6888877543 2468999999999999999999999 88999999999999999999999999988754
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc----CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH----CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
... ....|+..|+|||.+. +..+.++|||||||++|+|++|..||.................
T Consensus 166 ~~~-------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~------- 231 (308)
T cd06634 166 APA-------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES------- 231 (308)
T ss_pred cCc-------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-------
Confidence 321 2356889999999653 3578899999999999999999999976543222221111110
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
.......++..+.++|.+|+..+|++||++.+|++.
T Consensus 232 ---~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 232 ---PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred ---CCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 011122455668899999999999999999998763
No 345
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-35 Score=295.47 Aligned_cols=256 Identities=23% Similarity=0.332 Sum_probs=191.3
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... +++.||||.+........ ....+.+|+.+++.++|+||+++++++..
T Consensus 7 y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~h~ni~~~~~~~~~ 75 (337)
T cd07858 7 YVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRI-----------DAKRTLREIKLLRHLDHENVIAIKDIMPP 75 (337)
T ss_pred eeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccc-----------hhHHHHHHHHHHHhcCCCCccchHHheec
Confidence 556689999999999999976 488999999864321110 12346789999999999999999997644
Q ss_pred ------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 251 ------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 251 ------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
...|+|+||+. ++|.+++.. ..++++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||
T Consensus 76 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~--~~i~H~dlkp~Nil~~~~~~~kL 149 (337)
T cd07858 76 PHREAFNDVYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHS--ANVLHRDLKPSNLLLNANCDLKI 149 (337)
T ss_pred ccccccCcEEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh--CCEecCCCCHHHEEEcCCCCEEE
Confidence 24699999995 789888875 3469999999999999999999999 88999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--c
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--Q 400 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~ 400 (455)
+|||+++...... .......|+..|+|||.+. ..++.++|+|||||++|+|++|.+||...+.......+.. +
T Consensus 150 ~Dfg~~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 226 (337)
T cd07858 150 CDFGLARTTSEKG---DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLG 226 (337)
T ss_pred CcCccccccCCCc---ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhC
Confidence 9999988654321 1123346888999999653 3578899999999999999999999976542211111110 0
Q ss_pred ccc-----------hhhccc-------hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 401 EVP-----------VREVLD-------KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 401 ~~~-----------~~~~~d-------~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
... ....+. ..... ....++..+.++|.+||..+|++||++.++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 227 SPSEEDLGFIRNEKARRYIRSLPYTPRQSFAR-LFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CCChHHhhhcCchhhhHHHHhcCcccccCHHH-HcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000 000000 00000 012345667899999999999999999999864
No 346
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.2e-35 Score=295.02 Aligned_cols=256 Identities=25% Similarity=0.339 Sum_probs=190.2
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|.++ +|+.||||++........ ....+.+|+.+++++ +||||+++++++..
T Consensus 10 ~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~-----------~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~ 78 (337)
T cd07852 10 EILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNAT-----------DAQRTFREIMFLQELGDHPNIVKLLNVIKA 78 (337)
T ss_pred HHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcch-----------hhhhhhHHHHHHHHhcCCCCccceeeeecc
Confidence 44588999999999999986 478999999854221100 123467899999999 99999999997753
Q ss_pred ---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeec
Q psy5603 251 ---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDF 327 (455)
Q Consensus 251 ---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DF 327 (455)
...|+||||+. ++|.+++... .+++..+..++.|++.||.|||+ .||+||||||+||+++.++.+||+||
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~--~~i~H~dl~p~nill~~~~~~kl~d~ 151 (337)
T cd07852 79 ENDKDIYLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHS--GNVIHRDLKPSNILLNSDCRVKLADF 151 (337)
T ss_pred CCCceEEEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEEcCCCcEEEeec
Confidence 35799999996 6999888752 68899999999999999999999 88999999999999999999999999
Q ss_pred ccccccccCCcc--eeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-ccc
Q psy5603 328 GIVKMSETSNMK--TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEV 402 (455)
Q Consensus 328 Gla~~~~~~~~~--~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~ 402 (455)
|++......... ........||..|+|||.+.+ ..+.++|+||||+++|+|+||+.||.............. ...
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07852 152 GLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGP 231 (337)
T ss_pred cchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 998865433211 112234578999999996633 468899999999999999999999976543221111111 000
Q ss_pred ch------------hhccchh-------ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PV------------REVLDKE-------AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~------------~~~~d~~-------~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...++.. .... ...++..+.++|.+|+..+|.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~~l~~~P~~Rps~~~il~ 294 (337)
T cd07852 232 PSAEDIESIKSPFAATMLDSLPSRPRKPLDEL-LPKASDDALDLLKKLLVFNPNKRLTAEEALE 294 (337)
T ss_pred CCHHHHHHHHhhhHHHhhhhcccccccchhhh-ccCCCHHHHHHHHHhccCCcccccCHHHHhh
Confidence 00 0000000 0000 0114556888999999999999999999986
No 347
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9.9e-36 Score=290.17 Aligned_cols=246 Identities=26% Similarity=0.370 Sum_probs=185.5
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 250 (455)
++.+.||+|+||.||+|.++. ++.||||.++..... . ....+..|+.++.+. .||||+++++++.+
T Consensus 18 ~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-----~-------~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~ 85 (296)
T cd06618 18 ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-----E-------ENKRILMDLDVVLKSHDCPYIVKCYGYFIT 85 (296)
T ss_pred eeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-----H-------HHHHHHHHHHHHHhccCCCchHhhheeeec
Confidence 445899999999999999875 889999998643210 0 133466677777666 49999999998877
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+ +++|.+.+.... .++++..+..++.+++.||+|||+. .+++||||+|+||++++++.+||+|||+
T Consensus 86 ~~~~~~v~e~~-~~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~-~~i~H~dl~p~nill~~~~~~kL~dfg~ 161 (296)
T cd06618 86 DSDVFICMELM-STCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEK-HGVIHRDVKPSNILLDASGNVKLCDFGI 161 (296)
T ss_pred CCeEEEEeecc-CcCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhh-CCEecCCCcHHHEEEcCCCCEEECcccc
Confidence 7889999998 557877766533 3799999999999999999999962 4799999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccccCC-----CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccch
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-----ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
+........ .....|+..|+|||.+.+. ++.++|+||||+++|+|++|..||.................
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-- 235 (296)
T cd06618 162 SGRLVDSKA----KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-- 235 (296)
T ss_pred chhccCCCc----ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--
Confidence 875533221 1234678899999977533 68899999999999999999999976432211111110100
Q ss_pred hhccchhccCCC-hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWN-ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~-~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+ ...++..+.+|+.+||..+|++||++.++++
T Consensus 236 -------~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 272 (296)
T cd06618 236 -------PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQ 272 (296)
T ss_pred -------CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00000 0123455888999999999999999999875
No 348
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.7e-35 Score=279.86 Aligned_cols=247 Identities=25% Similarity=0.323 Sum_probs=196.0
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.++||+|+||.||++..+ ++..+|+|++...... ......+.+|++++++++|+||+++++++.+
T Consensus 2 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 70 (256)
T cd08530 2 FKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS-----------QKEREDAVNEIRILASVNHPNIISYKEAFLD 70 (256)
T ss_pred ceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc-----------HHHHHHHHHHHHHHHhCCCCCchhhhhhhcc
Confidence 345588999999999999876 5789999998643321 1113457889999999999999999997666
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++|+||+++++|.+++..... ...+++..++.++.+++.||.|||+ .|++|+||+|+||+++.++.+||+|||
T Consensus 71 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~--~~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 71 GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHE--QKILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--CCcccCCCCcceEEEecCCcEEEeecc
Confidence 888999999999999998865322 3568999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .....|+..|+|||.+.+ .++.++|+||||+++|+|++|..||...+........... ...
T Consensus 149 ~~~~~~~~~-----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~-- 219 (256)
T cd08530 149 ISKVLKKNM-----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRG--KYP-- 219 (256)
T ss_pred chhhhccCC-----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCC--
Confidence 988765431 223468889999996644 5678999999999999999999999876533222221111 110
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. .+...+..+.+++.+||..+|++||++.++++
T Consensus 220 ------~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 ------P-IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------C-CchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0 11234556889999999999999999999875
No 349
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=2.9e-35 Score=279.13 Aligned_cols=249 Identities=29% Similarity=0.410 Sum_probs=196.6
Q ss_pred cCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
...+.||+|++|.||+|..+ +++.|++|++...... ......+.+|+.++++++||||+++++.+.+
T Consensus 3 ~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 71 (260)
T cd06606 3 TRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-----------EEELEALEREIRILSSLQHPNIVRYYGSERDE 71 (260)
T ss_pred eeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-----------hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC
Confidence 34588999999999999987 5889999998654321 1124568899999999999999999997755
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++|+||+++++|.+++... ..+++..+..++.+++.||.|||+ .+++||||+|+||+++.++.++|+|||
T Consensus 72 ~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~--~~~~h~dl~p~ni~i~~~~~~~l~d~~ 146 (260)
T cd06606 72 EKNTLNIFLEYVSGGSLSSLLKKF---GKLPEPVIRKYTRQILEGLAYLHS--NGIVHRDIKGANILVDSDGVVKLADFG 146 (260)
T ss_pred CCCeEEEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHH--CCccccCCCHHHEEEcCCCCEEEcccc
Confidence 4678999999999999999873 379999999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
.+......... .......++..|+|||.+.+ ..+.++|+||||+++|+|++|..||...............
T Consensus 147 ~~~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~------- 218 (260)
T cd06606 147 CAKRLGDIETG-EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS------- 218 (260)
T ss_pred cEEeccccccc-ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-------
Confidence 98876554321 11234578899999997654 4788999999999999999999999876521111111000
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.......+...+..+.+++.+|+..+|++||++.+++.
T Consensus 219 --~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 --SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred --cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 00001111233566899999999999999999999875
No 350
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.8e-35 Score=288.06 Aligned_cols=241 Identities=24% Similarity=0.390 Sum_probs=189.4
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
.+||+|+||.||+|..+ ++..||||++..... .....+.+|+.++++++|+||+++++++.. ...
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-------------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 92 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQ-------------QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDEL 92 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccch-------------hHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEE
Confidence 67999999999999886 588999998743211 013458899999999999999999997766 888
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
++||||+++++|.+++.. ..+++..+..++.|++.|++|||+ .|++||||||+||++++++.++|+|||++...
T Consensus 93 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~--~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~ 166 (292)
T cd06657 93 WVVMEFLEGGALTDIVTH----TRMNEEQIAAVCLAVLKALSVLHA--QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQV 166 (292)
T ss_pred EEEEecCCCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHEEECCCCCEEEcccccceec
Confidence 999999999999998753 358999999999999999999999 88999999999999999999999999987754
Q ss_pred ccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... .......|+..|+|||.+. ..++.++|+||||+++|+|++|..||............... . ...+.
T Consensus 167 ~~~~---~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~-~--~~~~~--- 237 (292)
T cd06657 167 SKEV---PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN-L--PPKLK--- 237 (292)
T ss_pred cccc---ccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhh-C--CcccC---
Confidence 3321 1123356889999999664 46788999999999999999999999865433221111110 0 00000
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....++..+.+++.+|+..+|.+||++.++++
T Consensus 238 ---~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 238 ---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ---CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 01123345778899999999999999999986
No 351
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.8e-35 Score=278.02 Aligned_cols=237 Identities=27% Similarity=0.353 Sum_probs=189.4
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|+||.||++... +++.||+|.+........ .....+..|++++++++||||+++++.+.+ ...|+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~----------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 70 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKR----------KEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYL 70 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcch----------HHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEE
Confidence 699999999999986 388999999875432111 114458899999999999999999998766 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++.....
T Consensus 71 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~--~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~ 145 (250)
T cd05123 71 VLEYAPGGELFSHLSKE---GRFSEERARFYAAEIVLALEYLHS--LGIIYRDLKPENILLDADGHIKLTDFGLAKELSS 145 (250)
T ss_pred EEecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH--CCceecCCCcceEEEcCCCcEEEeecCcceeccc
Confidence 99999999999999863 358999999999999999999999 8899999999999999999999999999876544
Q ss_pred CCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccC
Q psy5603 336 SNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGE 414 (455)
Q Consensus 336 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 414 (455)
.. .......|+..|+|||...+ ..+.++|+||||+++|++++|..||...+..............++.
T Consensus 146 ~~---~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------- 214 (250)
T cd05123 146 EG---SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPE-------- 214 (250)
T ss_pred CC---CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC--------
Confidence 32 11334578899999996644 5688999999999999999999999766542222222211111111
Q ss_pred CChhHHHHHHHHHHHhhhccCcCCCCCHHH
Q psy5603 415 WNETHVETLISIVFEKCCVFEKDKRASMRD 444 (455)
Q Consensus 415 ~~~~~~~~~l~~Li~~~l~~dp~~RPs~~e 444 (455)
..+..+.+++.+|+..+|++||++.+
T Consensus 215 ----~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 ----FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred ----CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 12445788999999999999999954
No 352
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.8e-35 Score=292.16 Aligned_cols=268 Identities=20% Similarity=0.245 Sum_probs=192.2
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhh-hhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEA-AMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+.+.||+|+||.||+|.++ +++.||||+++............... .......+.+|++++++++|+||+++++++..
T Consensus 13 ~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 92 (335)
T PTZ00024 13 KGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEG 92 (335)
T ss_pred hhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecC
Confidence 4578999999999999976 48999999986543321110000000 00001246789999999999999999998766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...|+||||+. |+|.+++.. ...+++.....++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 93 ~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~--~~i~H~dl~~~nill~~~~~~kl~dfg~~ 166 (335)
T PTZ00024 93 DFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHK--WYFMHRDLSPANIFINSKGICKIADFGLA 166 (335)
T ss_pred CcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh--CCeecccccHHHeEECCCCCEEECCccce
Confidence 78899999996 699998876 3458999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCc-----------ceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHh
Q psy5603 331 KMSETSNM-----------KTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLV 397 (455)
Q Consensus 331 ~~~~~~~~-----------~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~ 397 (455)
+....... .........++..|+|||.+.+ .++.++|+|||||++|||+||.+||...+.......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i 246 (335)
T PTZ00024 167 RRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRI 246 (335)
T ss_pred eecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 76542110 0011122356888999997654 3688999999999999999999999876643222221
Q ss_pred hh-cccchhhcc------------chh-ccCC--ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 398 VE-QEVPVREVL------------DKE-AGEW--NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 398 ~~-~~~~~~~~~------------d~~-~~~~--~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. ...+....+ ... .... .....+..+.++|.+||..+|.+||++.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 247 FELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 11 000000000 000 0000 00122455788999999999999999999975
No 353
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=5.4e-35 Score=280.95 Aligned_cols=232 Identities=24% Similarity=0.300 Sum_probs=177.2
Q ss_pred cCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh-CCccceeeecccccC-ceeE
Q psy5603 178 LGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ-CKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~-~~~~ 254 (455)
||+|+||.||++..+ ++..+|+|.+...... ..|+..... .+||||+++++.+.. ...|
T Consensus 24 lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------------------~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 24 LIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN------------------AIEPMVHQLMKDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred ecCCCceEEEEEEEcCCCcEEEEEEEehhhcc------------------hhhHHHHHHhhcCCCEEEEEEEEecCCeeE
Confidence 599999999999976 4788999998643210 012222211 279999999997766 8889
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC-ceEEeeccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFGIVKMS 333 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGla~~~ 333 (455)
+||||+++++|.+++... .++++.++..++.|++.||.|||+ .+++||||||+||+++.++ .++|+|||+++..
T Consensus 86 iv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~--~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHK--HNIIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred EEEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCeeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 999999999999999763 379999999999999999999999 8899999999999999998 9999999998754
Q ss_pred ccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 334 ETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 334 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
... ....|+..|+|||++.+ .++.++|+||||+++|||++|..||................ ....
T Consensus 161 ~~~-------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~------~~~~- 226 (267)
T PHA03390 161 GTP-------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR------QQKK- 226 (267)
T ss_pred CCC-------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh------hccc-
Confidence 322 23468999999997644 67889999999999999999999998554222111110000 0000
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCC-HHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRAS-MRDIVD 447 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs-~~evl~ 447 (455)
.......+..+.++|.+||+.+|.+||+ ++++++
T Consensus 227 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 -LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0111235566889999999999999995 688764
No 354
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.9e-35 Score=277.72 Aligned_cols=249 Identities=25% Similarity=0.392 Sum_probs=197.2
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||++.+. ++..||+|++...... ......+.+|+++++.++|||++++++.+..
T Consensus 2 y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~ 70 (258)
T cd08215 2 YEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-----------EKEREDALNEVKILKKLNHPNIIKYYESFEE 70 (258)
T ss_pred ceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-----------hHHHHHHHHHHHHHHhcCCCChhheEEEEec
Confidence 345588999999999999986 4789999998643321 1114558899999999999999999997766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...++|+||+++++|.+++.... ...++++..+..++.+++.||.|||+ .+++|+||+|+||++++++.++|+|||
T Consensus 71 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~--~~~~H~dl~~~nil~~~~~~~~l~d~~ 148 (258)
T cd08215 71 KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHS--RKILHRDIKPQNIFLTSNGLVKLGDFG 148 (258)
T ss_pred CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHh--CCEecccCChHHeEEcCCCcEEECCcc
Confidence 78899999999999999997642 13579999999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... .......|++.|+|||.+ ...++.++|+||+|+++++|++|..||...+............ ..
T Consensus 149 ~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~-- 221 (258)
T cd08215 149 ISKVLSSTV---DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ--YP-- 221 (258)
T ss_pred ceeecccCc---ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC--CC--
Confidence 987654432 123345789999999965 4457889999999999999999999998765322222211110 00
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. +..++..+.+++.+||..+|.+||++.++++
T Consensus 222 ------~~-~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 ------PI-PSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred ------CC-CCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00 1134456888999999999999999999875
No 355
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=5.1e-35 Score=282.86 Aligned_cols=256 Identities=23% Similarity=0.301 Sum_probs=189.2
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC---Cccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC---KHVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~ 248 (455)
++.+.||+|+||.||+|.++. ++.||+|+++....... ....+.+|+.+++++ .|||++++++++
T Consensus 2 ~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~-----------~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~ 70 (287)
T cd07838 2 EELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEG-----------IPLSTLREIALLKQLESFEHPNIVRLLDVC 70 (287)
T ss_pred eEEEEecccCceEEEEEEECCCCCEEEEEEeccccccch-----------hhhhHHHHHHHHHHhhccCCCCcceEEEEE
Confidence 455889999999999999874 89999999975432110 022355677776655 699999999987
Q ss_pred cC-ce-----eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 249 NN-IM-----NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 249 ~~-~~-----~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
.+ .. .+++|||+. ++|.+++..... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH~--~~i~h~~l~~~nili~~~~~~ 146 (287)
T cd07838 71 HGPRTDRELKLTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLHS--HRIVHRDLKPQNILVTSDGQV 146 (287)
T ss_pred eeccCCCCceeEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHHH--CCeeeccCChhhEEEccCCCE
Confidence 66 44 799999996 589998876432 358999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc-
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ- 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~- 400 (455)
||+|||++........ .....++..|+|||.+. ..++.++|+|||||++|||++|.+||...........+...
T Consensus 147 ~l~dfg~~~~~~~~~~----~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07838 147 KIADFGLARIYSFEMA----LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVI 222 (287)
T ss_pred EEeccCcceeccCCcc----cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHc
Confidence 9999999876543321 12345788999999664 45788999999999999999999999876533222221110
Q ss_pred cc--c--h-------hhccchhccCCC---hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EV--P--V-------REVLDKEAGEWN---ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~--~--~-------~~~~d~~~~~~~---~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. . . ............ .......+.++|.+||..||.+||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 223 GLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 00 0 0 000000000000 1234566788999999999999999999874
No 356
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4e-35 Score=292.09 Aligned_cols=257 Identities=22% Similarity=0.307 Sum_probs=188.3
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.|++.+.||.|+||.||+|..+ +|+.||+|++..... . ....+.+|++++++++||||+++++++.
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~------~-------~~~~~~~Ei~~l~~l~h~~i~~~~~~~~ 72 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP------Q-------SVKHALREIKIIRRLDHDNIVKVYEVLG 72 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC------c-------hHHHHHHHHHHHHhcCCCcchhhHhhhc
Confidence 4566799999999999999986 488999999864322 1 1345788999999999999999997654
Q ss_pred C---------------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcE
Q psy5603 250 N---------------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANV 314 (455)
Q Consensus 250 ~---------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NI 314 (455)
. ...|+||||+. ++|.+++.. ..+++..+..++.|++.||.|||+ .|++||||||+||
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~--~givH~dikp~Ni 145 (342)
T cd07854 73 PSGSDLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHS--ANVLHRDLKPANV 145 (342)
T ss_pred ccccccccccccccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHE
Confidence 3 24689999996 689888753 358999999999999999999999 8899999999999
Q ss_pred EEc-CCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcch
Q psy5603 315 LLD-ENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTI 391 (455)
Q Consensus 315 Ll~-~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~ 391 (455)
+++ +++.+||+|||+++................|+..|+|||.+.+ .++.++|||||||++|+|++|..||......
T Consensus 146 li~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~ 225 (342)
T cd07854 146 FINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHEL 225 (342)
T ss_pred EEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 997 5568999999998765332111111233468889999996532 4678999999999999999999999876532
Q ss_pred hhHHHhhhc-ccc-----------hhhccc--hhccCCC----hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 392 LYYYLVVEQ-EVP-----------VREVLD--KEAGEWN----ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 392 ~~~~~~~~~-~~~-----------~~~~~d--~~~~~~~----~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
......... ... ...... ......+ ....+..+.+|+.+||..||++||++.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 226 EQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 222211110 000 000000 0000000 0123456788999999999999999999974
No 357
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-35 Score=293.65 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=191.2
Q ss_pred HHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHh
Q psy5603 156 FCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLS 234 (455)
Q Consensus 156 ~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 234 (455)
..|+..++..+.. .|.+.+.||+|+||.||+|.+. +|+.||||++....... .....+.+|+.+++
T Consensus 3 ~~~~~~~~~~~~~--~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~e~~~l~ 69 (342)
T cd07879 3 REEVNKTVWELPE--RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-----------IFAKRAYRELTLLK 69 (342)
T ss_pred hhhhhhhhhcccc--ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-----------cchhHHHHHHHHHH
Confidence 3445444433322 2455689999999999999975 58999999986432100 01334788999999
Q ss_pred hCCccceeeecccccC-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeec
Q psy5603 235 QCKHVNLLRLLGLCNN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHR 307 (455)
Q Consensus 235 ~l~h~niv~l~~~~~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~ 307 (455)
+++||||+++++++.. ...|+|++|+. .+|..++. ..+++..+..++.|++.||.|||+ ++++||
T Consensus 70 ~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~--~~i~H~ 141 (342)
T cd07879 70 HMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIHS--AGIIHR 141 (342)
T ss_pred hcCCCCccchhheecccccCCCCceEEEEecccc-cCHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH--CCcccC
Confidence 9999999999997653 24589999995 47766542 258999999999999999999999 889999
Q ss_pred CCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCC
Q psy5603 308 DVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPI 385 (455)
Q Consensus 308 Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~ 385 (455)
||||+||+++.++.+||+|||+++..... .....||..|+|||.+.+ .++.++|+|||||++|||++|+.||
T Consensus 142 dlkp~NIll~~~~~~kL~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf 215 (342)
T cd07879 142 DLKPGNLAVNEDCELKILDFGLARHADAE------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLF 215 (342)
T ss_pred CCCHHHEEECCCCCEEEeeCCCCcCCCCC------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCC
Confidence 99999999999999999999998754321 123467889999997644 4688999999999999999999999
Q ss_pred CCCcchhhHHHhhh-cccchhhccc---h--------hccCCCh-------hHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 386 DDNNTILYYYLVVE-QEVPVREVLD---K--------EAGEWNE-------THVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 386 ~~~~~~~~~~~~~~-~~~~~~~~~d---~--------~~~~~~~-------~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
...+.......... ...+.+.+.+ . .....+. ...+..+.+||.+||..||++||++.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l 295 (342)
T cd07879 216 KGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEAL 295 (342)
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 87653221111111 0001000000 0 0000000 12344577899999999999999999998
Q ss_pred H
Q psy5603 447 D 447 (455)
Q Consensus 447 ~ 447 (455)
.
T Consensus 296 ~ 296 (342)
T cd07879 296 E 296 (342)
T ss_pred c
Confidence 4
No 358
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=8.9e-36 Score=310.97 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=181.4
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC--CcEEEEEEeecccCcCCCCC----chhhhhhhhHHHHHHHHHHHhhCCccceeee
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNS----DNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~----~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
.|++.++||+|+||+||++..+. +..+++|.+........... ............+.+|+.++++++||||+++
T Consensus 149 ~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 228 (501)
T PHA03210 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKI 228 (501)
T ss_pred ccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcE
Confidence 46777999999999999997653 23333332211110000000 0000011124568899999999999999999
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
++++.+ ...|+|++++ +++|.+++....- .......++..|+.|++.||.|||+ ++||||||||+|||++.++.
T Consensus 229 ~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~--~gIiHrDLKP~NILl~~~~~ 305 (501)
T PHA03210 229 EEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD--KKLIHRDIKLENIFLNCDGK 305 (501)
T ss_pred eEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEECCCCC
Confidence 998877 7788999998 5678777654221 2233466778899999999999999 88999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCC-CCCCcch---hhHHH
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKP-IDDNNTI---LYYYL 396 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p-~~~~~~~---~~~~~ 396 (455)
+||+|||+++....... .......||..|+|||++.+ .++.++|||||||++|||++|..+ +...... .....
T Consensus 306 vkL~DFGla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~ 383 (501)
T PHA03210 306 IVLGDFGTAMPFEKERE--AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI 383 (501)
T ss_pred EEEEeCCCceecCcccc--cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence 99999999986543321 12234689999999997644 678999999999999999998754 4333211 11111
Q ss_pred hhhcccc----------hhhccchhc----cC-----CChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 397 VVEQEVP----------VREVLDKEA----GE-----WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 397 ~~~~~~~----------~~~~~d~~~----~~-----~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+...... +.++++... .. ......+..+.++|.+||..||++||++.|++.
T Consensus 384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 1000000 001111000 00 000112334667899999999999999999986
No 359
>KOG2052|consensus
Probab=100.00 E-value=1.5e-35 Score=285.58 Aligned_cols=259 Identities=24% Similarity=0.390 Sum_probs=197.7
Q ss_pred CCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhh--CCccceeeeccccc--
Q psy5603 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQ--CKHVNLLRLLGLCN-- 249 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~-- 249 (455)
+.+.||+|.||.||+|.|+ |..||||++.... ...+.+|.+|... ++|+||+.+++.-.
T Consensus 215 L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd----------------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~ 277 (513)
T KOG2052|consen 215 LQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD----------------ERSWFRETEIYQTVMLRHENILGFIAADNKD 277 (513)
T ss_pred EEEEecCccccceeecccc-CCceEEEEecccc----------------hhhhhhHHHHHHHHHhccchhhhhhhccccC
Confidence 4578999999999999998 8999999996432 2347788888765 59999999998532
Q ss_pred -C--ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC------CCCeeecCCCCCcEEEcCCC
Q psy5603 250 -N--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL------SKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 250 -~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~------~~~iiH~Dikp~NILl~~~~ 320 (455)
+ .+.+||.+|.+.|||+|+|.+ ..++....++++..+|.||+|||.. ...|.|||||+.|||+.++|
T Consensus 278 ~gs~TQLwLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~ 353 (513)
T KOG2052|consen 278 NGSWTQLWLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 353 (513)
T ss_pred CCceEEEEEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCC
Confidence 2 477999999999999999997 3699999999999999999999952 24599999999999999999
Q ss_pred ceEEeecccccccccCCc-ceeeeccCCCCCCCCCcccccCCC-------CcccchHHHHHHHHHHHcC----------C
Q psy5603 321 VPKLGDFGIVKMSETSNM-KTMYTENLTGTRPYMPPEAMHCQI-------STKTDVFSYGVILLELLTG----------M 382 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~-------~~~sDv~SlGvvl~elltG----------~ 382 (455)
.+.|+|+|||........ -....+..+||..|||||++.... ...+||||||.|+||++.. +
T Consensus 354 ~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~ 433 (513)
T KOG2052|consen 354 TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQ 433 (513)
T ss_pred cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhc
Confidence 999999999876554421 112235568999999999986542 2368999999999999752 4
Q ss_pred CCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
+||.+.-+.........+..-+...-......|....+...+.++++.||..+|.-|-++=.+-+.|.++.
T Consensus 434 ~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~ 504 (513)
T KOG2052|consen 434 LPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLS 504 (513)
T ss_pred CCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHh
Confidence 56664432111111111111111111122256777788888999999999999999999999988888775
No 360
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6e-35 Score=278.77 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=191.0
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||++.+.. +..+++|.++......... . ....+..|+.++++++||||+++++++.+
T Consensus 2 y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (260)
T cd08222 2 YILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNP-N-------ETVQANQEAQLLSKLDHPAIVKFHASFLE 73 (260)
T ss_pred ceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCc-c-------hHHHHHHHHHHHHhCCCCcHHHHHHHHhc
Confidence 5566899999999999998764 4456677765432211111 1 12346789999999999999999998776
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcC-CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVN-NTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|+||||+++++|.+++.... ....+++.+++.++.|++.||.|||+ .+++|+||||+||+++. +.+||+|||
T Consensus 74 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~--~~i~h~~l~~~nili~~-~~~~l~d~g 150 (260)
T cd08222 74 RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQ--RRILHRDLKAKNIFLKN-NLLKIGDFG 150 (260)
T ss_pred CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHH--cCccccCCChhheEeec-CCEeecccC
Confidence 78899999999999999886532 24579999999999999999999999 88999999999999975 579999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
+++...... .......|+..|+|||.+. ..++.++|+||||+++|+|++|..||................ .+
T Consensus 151 ~~~~~~~~~---~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~-- 223 (260)
T cd08222 151 VSRLLMGSC---DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGP--TP-- 223 (260)
T ss_pred ceeecCCCc---ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCC--CC--
Confidence 987654322 1223457889999999664 457889999999999999999999997654322221111111 00
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+..++..+.++|.+||..+|++||++.++++
T Consensus 224 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 -------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred -------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 012344566888999999999999999999875
No 361
>KOG1006|consensus
Probab=100.00 E-value=4.4e-37 Score=278.52 Aligned_cols=262 Identities=29% Similarity=0.350 Sum_probs=194.2
Q ss_pred cceeeeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHH
Q psy5603 150 ELIAFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFEN 228 (455)
Q Consensus 150 ~~~~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (455)
....|+-.+|... ..||.|+||+|++-.++ .|+..|||+++.... ....+++..
T Consensus 57 ~~~~F~~~~Lqdl-------------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~------------~keq~rll~ 111 (361)
T KOG1006|consen 57 HLHTFTSDNLQDL-------------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI------------EKEQKRLLM 111 (361)
T ss_pred cccccccchHHHH-------------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccc------------hHHHHHHHH
Confidence 4555666666554 67999999999999887 489999999976543 111456888
Q ss_pred HHHHHhh-CCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhc--CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe
Q psy5603 229 EVQTLSQ-CKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARV--NNTPPLDSNKRYSIALGVAEALHYLHSLSKPI 304 (455)
Q Consensus 229 E~~~l~~-l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~i 304 (455)
|.+...+ -+.||||++||.+.. +..++.||.| .-||..+.... .....+++...-.|+..+..||.||-+. ..|
T Consensus 112 e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~-lki 189 (361)
T KOG1006|consen 112 EHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE-LKI 189 (361)
T ss_pred HHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH-hhh
Confidence 8887544 478999999997655 8888999999 46665443221 1134689999999999999999999874 579
Q ss_pred eecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc---CCCCcccchHHHHHHHHHHHcC
Q psy5603 305 IHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH---CQISTKTDVFSYGVILLELLTG 381 (455)
Q Consensus 305 iH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~sDv~SlGvvl~elltG 381 (455)
|||||||+|||||..|.+||||||++-....+-. .+.-.|-.+|||||.+. .+++.+|||||||++|||+.||
T Consensus 190 IHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA----kT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG 265 (361)
T KOG1006|consen 190 IHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA----KTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATG 265 (361)
T ss_pred hhccCChhheEEecCCCEeeecccchHhHHHHHH----hhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecC
Confidence 9999999999999999999999999875544321 23447889999999663 2488899999999999999999
Q ss_pred CCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 382 MKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 382 ~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..||.+.+.............+..-..+.. ....+..+..+|..|+.+|.+.||...++.+
T Consensus 266 ~fPyr~w~svfeql~~Vv~gdpp~l~~~~~-----~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 266 NFPYRKWDSVFEQLCQVVIGDPPILLFDKE-----CVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred CCCcchHHHHHHHHHHHHcCCCCeecCccc-----ccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 999998775332222222111111111111 1123445778899999999999999998865
No 362
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=3.6e-35 Score=292.61 Aligned_cols=251 Identities=23% Similarity=0.367 Sum_probs=188.7
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.+.||+|+||.||+|... ++..||||++..... . ......+.+|++++++++||||+++++++..
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~-----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07880 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ------S-----ELFAKRAYRELRLLKHMKHENVIGLLDVFTP 85 (343)
T ss_pred eEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc------c-----hHHHHHHHHHHHHHHhcCCCCccceeeeecC
Confidence 455689999999999999875 588999999854221 0 0113457899999999999999999997654
Q ss_pred -c------eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 251 -I------MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -~------~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
. ..|+||+|+ +++|.+++.. .++++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~--~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 86 DLSLDRFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHA--AGIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred CccccccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEE
Confidence 2 358999998 7899888763 358999999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc-
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ- 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~- 400 (455)
|+|||+++..... .....+++.|+|||.+.+ .++.++|+|||||++|++++|..||...+...........
T Consensus 159 l~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~ 232 (343)
T cd07880 159 ILDFGLARQTDSE------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT 232 (343)
T ss_pred EeecccccccccC------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 9999998754322 123467899999997643 4788999999999999999999999876532222111110
Q ss_pred ccchh------------hccchhccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVR------------EVLDKEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~------------~~~d~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..... .+... ..... ...++..+.++|.+|+..||++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKK-LPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHh-ccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000 00000 00000 0123445788999999999999999999983
No 363
>KOG0612|consensus
Probab=100.00 E-value=2.2e-36 Score=318.15 Aligned_cols=245 Identities=24% Similarity=0.335 Sum_probs=198.4
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+.+.||+|+||.|..++++. ++.||.|++++-.-... .....|..|-.+|.....+-|+.+.-.+.+ .
T Consensus 79 ilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr----------~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 79 ILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKR----------AETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhc----------hhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 34899999999999999874 78899999975322111 114458889999999999999999888877 8
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
++|+||+||+||+|..++.+.+ ++++..+..++..|+.||.-||+ .|+|||||||+|||||..|++||+|||.|-
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~--mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHS--MGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHh--ccceeccCCcceeEecccCcEeeccchhHH
Confidence 8999999999999999998854 69999999999999999999999 789999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCccccc------CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc--ccc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMH------CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ--EVP 403 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~--~~~ 403 (455)
....+. +...+..+|||.|++||++. |.|+..+|+||+||++||||.|..||........+-.+..- ...
T Consensus 224 km~~dG--~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~ 301 (1317)
T KOG0612|consen 224 KMDADG--TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLS 301 (1317)
T ss_pred hcCCCC--cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcC
Confidence 665443 33456789999999999872 45788999999999999999999999998877777666552 222
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC---HHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS---MRDIV 446 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs---~~evl 446 (455)
+++ ...++...++||. .+.-+|.+|.. +.++-
T Consensus 302 FP~----------~~~VSeeakdLI~-~ll~~~e~RLgrngiedik 336 (1317)
T KOG0612|consen 302 FPD----------ETDVSEEAKDLIE-ALLCDREVRLGRNGIEDIK 336 (1317)
T ss_pred CCc----------ccccCHHHHHHHH-HHhcChhhhcccccHHHHH
Confidence 221 2335666888886 44556777766 66553
No 364
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=3.7e-35 Score=290.73 Aligned_cols=252 Identities=22% Similarity=0.348 Sum_probs=188.3
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++.+.||+|+||.||+|..+ +++.||||++....... .....+.+|++++++++||||+++++++..
T Consensus 12 y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 80 (328)
T cd07856 12 YVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-----------VLAKRTYRELKLLKHLRHENIISLSDIFIS 80 (328)
T ss_pred eEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-----------chhHHHHHHHHHHHhcCCCCeeeEeeeEec
Confidence 344599999999999999876 58899999986432110 013447789999999999999999997644
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
...|+|+||+ +++|.+++.. .++++.....++.|++.||.|||+ .+++||||||+||++++++.+||+|||
T Consensus 81 ~~~~~~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~--~~iiH~dl~p~Nili~~~~~~~l~dfg 153 (328)
T cd07856 81 PLEDIYFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHS--AGVVHRDLKPSNILINENCDLKICDFG 153 (328)
T ss_pred CCCcEEEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEeECCCCCEEeCccc
Confidence 5678999998 6789888763 357888999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchh
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR 405 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~ 405 (455)
+++..... .....++..|+|||.+.+ .++.++|+|||||++|+|+||.+||.............. -..+..
T Consensus 154 ~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 154 LARIQDPQ------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred cccccCCC------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 98753221 123467889999997643 578899999999999999999999977653221111111 000000
Q ss_pred h------------ccchhc--cCCCh----hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 E------------VLDKEA--GEWNE----THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 ~------------~~d~~~--~~~~~----~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ ++.... ...+. ..++..+.++|.+||..+|++||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0 000000 00000 123456888999999999999999999875
No 365
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5.9e-35 Score=291.24 Aligned_cols=260 Identities=25% Similarity=0.360 Sum_probs=190.1
Q ss_pred HHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC
Q psy5603 158 DLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC 236 (455)
Q Consensus 158 ~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 236 (455)
++..++++|. +.+.||+|+||.||+|... +++.||+|++...... ......+.+|+.+++++
T Consensus 11 ~~~~~~~~y~------~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----------~~~~~~~~~Ei~~l~~l 73 (345)
T cd07877 11 TIWEVPERYQ------NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQS-----------IIHAKRTYRELRLLKHM 73 (345)
T ss_pred HHhhccCceE------EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchh-----------hHHHHHHHHHHHHHHHc
Confidence 4444555554 4489999999999999865 5889999998643210 01134577899999999
Q ss_pred CccceeeecccccC-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCC
Q psy5603 237 KHVNLLRLLGLCNN-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 237 ~h~niv~l~~~~~~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Di 309 (455)
+||||+++++++.. ...|++++++ +++|.+++.. ..+++..+..++.|++.||+|||+ .+++||||
T Consensus 74 ~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~--~~ivH~dl 146 (345)
T cd07877 74 KHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHS--ADIIHRDL 146 (345)
T ss_pred CCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeeecCC
Confidence 99999999987643 2357777776 8899888764 258999999999999999999999 88999999
Q ss_pred CCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCC
Q psy5603 310 KSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 310 kp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~ 387 (455)
||+||+++.++.+||+|||+++..... .....||..|+|||.+.+ .++.++|||||||++|||++|..||..
T Consensus 147 kp~NIll~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~ 220 (345)
T cd07877 147 KPSNLAVNEDCELKILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 220 (345)
T ss_pred ChHHEEEcCCCCEEEeccccccccccc------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999999999999999998754321 223578899999996644 468899999999999999999999976
Q ss_pred CcchhhHHHhhh-cccchhhcc---------------chhccC-CC--hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 388 NNTILYYYLVVE-QEVPVREVL---------------DKEAGE-WN--ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 388 ~~~~~~~~~~~~-~~~~~~~~~---------------d~~~~~-~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.......... ......... ...... +. ....+..+.++|.+|+..+|.+||++.++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 221 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 553221111111 000000000 000000 00 0012445788999999999999999999875
No 366
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.8e-35 Score=293.38 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=189.6
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|++...||+|+||.||+|.+. ++..||||++...... ......+.+|+.++++++|||++++++++..
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 85 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQS-----------AIHAKRTYRELRLLKHMDHENVIGLLDVFTP 85 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccch-----------hhHHHHHHHHHHHHHhccCCCHHHHHHHhhc
Confidence 455689999999999999986 4789999998543110 0013447789999999999999999986654
Q ss_pred -ce------eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 251 -IM------NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 251 -~~------~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
.. .|+|+||+ +++|.+++.. .++++..+..++.|++.||.|||+ .|++||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~--~gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07851 86 ASSLEDFQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHS--AGIIHRDLKPSNIAVNEDCELK 158 (343)
T ss_pred cccccccccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH--CCeecCCCCHHHeEECCCCCEE
Confidence 33 78999998 7799998874 368999999999999999999999 8899999999999999999999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
|+|||++...... .....++..|+|||.+.+ .++.++|||||||++||++||..||...........+.. .
T Consensus 159 L~dfg~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~ 232 (343)
T cd07851 159 ILDFGLARHTDDE------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV 232 (343)
T ss_pred Ecccccccccccc------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Confidence 9999998765332 223467889999996643 468899999999999999999999986653322222111 0
Q ss_pred ccchhhccc------------hhc----cCCC--hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVREVLD------------KEA----GEWN--ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d------------~~~----~~~~--~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...+.. ... ..+. ....+..+.++|.+||..+|++||++.+|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 101000000 000 0000 0112556889999999999999999999875
No 367
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-34 Score=279.58 Aligned_cols=256 Identities=25% Similarity=0.357 Sum_probs=192.8
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+....||+|+||.||+|+... ++.||+|++....... . ....+.+|+.++++++|+|++++++++.+
T Consensus 2 ~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~----------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~ 70 (282)
T cd07829 2 EKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEE-G----------IPSTALREISLLKELKHPNIVKLLDVIHTE 70 (282)
T ss_pred eeehcccccCcceEEEeeecCCCcEEEEEEeccccccc-c----------ccHHHHHHHHHHHhcCCCCHHHHHhhhhcC
Confidence 344789999999999999874 8999999997543110 0 12347789999999999999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|+||++ ++|.+++.... ..+++..+..++.+++.||.|||+ .+++||||+|+||++++++.+||+|||++
T Consensus 71 ~~~~~v~e~~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~--~~i~H~~l~~~ni~~~~~~~~~l~d~g~~ 145 (282)
T cd07829 71 RKLYLVFEYCD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHS--HRILHRDLKPQNILINRDGVLKLADFGLA 145 (282)
T ss_pred CceEEEecCcC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHH--CCcccCCCChheEEEcCCCCEEEecCCcc
Confidence 78899999997 69999998642 369999999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-C-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-cccchh--
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-C-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-QEVPVR-- 405 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~~~~~~-- 405 (455)
+....... ......++..|+|||.+. . .++.++|+|||||++||+++|.+||.............. ...+..
T Consensus 146 ~~~~~~~~---~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (282)
T cd07829 146 RAFGIPLR---TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEES 222 (282)
T ss_pred cccCCCcc---ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHH
Confidence 76543221 122335677899999653 3 578899999999999999999999987653322211111 000000
Q ss_pred -----hc--cchhccCCC-------hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 406 -----EV--LDKEAGEWN-------ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 406 -----~~--~d~~~~~~~-------~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.. .+.....+. ....+..+.++|.+||..+|++||++.+++.
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 223 WPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 00 000000000 0122456889999999999999999999875
No 368
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=9.2e-35 Score=288.22 Aligned_cols=259 Identities=23% Similarity=0.293 Sum_probs=187.4
Q ss_pred CcCCCccCcCCCeEEEEEEEcC---CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN---GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGL 247 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~---~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 247 (455)
|++.+.||+|+||.||++.... +..||||++....... ...+.+.+|+.+++++ .||||++++++
T Consensus 2 y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~-----------~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 70 (332)
T cd07857 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKK-----------ILAKRALRELKLLRHFRGHKNITCLYDM 70 (332)
T ss_pred ceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccc-----------hhHHHHHHHHHHHHHhcCCCChheeeee
Confidence 3455889999999999999763 6789999986332110 1134578899999999 59999999985
Q ss_pred cc----C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 248 CN----N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 248 ~~----~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
+. . ...+++++|+ +++|.+++.. ..++++..+..++.|++.||.|||+ +|++||||||+||+++.++.+
T Consensus 71 ~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~givH~dlkp~Nili~~~~~~ 144 (332)
T cd07857 71 DIVFPGNFNELYLYEELM-EADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHS--ANVLHRDLKPGNLLVNADCEL 144 (332)
T ss_pred eeeccccCCcEEEEEecc-cCCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHeEEcCCCCE
Confidence 32 2 3457888887 5799998865 3468999999999999999999999 889999999999999999999
Q ss_pred EEeecccccccccCCcc-eeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh
Q psy5603 323 KLGDFGIVKMSETSNMK-TMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
||+|||+++........ ........||..|+|||.+.+ .++.++|+|||||++|+|++|.+||...+..........
T Consensus 145 kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~ 224 (332)
T cd07857 145 KICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQ 224 (332)
T ss_pred EeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHH
Confidence 99999998765432211 111234678999999996543 468899999999999999999999986552211111110
Q ss_pred -cccchhhc---------------cchhc-cC--CChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 -QEVPVREV---------------LDKEA-GE--WNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 -~~~~~~~~---------------~d~~~-~~--~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
-..+..+. ..... .. ......+..+.+++.+||..+|++||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 225 VLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 00000000 00000 00 000112456888999999999999999999864
No 369
>KOG0614|consensus
Probab=100.00 E-value=3.3e-36 Score=293.43 Aligned_cols=239 Identities=26% Similarity=0.363 Sum_probs=199.7
Q ss_pred CCCccCcCCCeEEEEEEEcCCc-EEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLKNGM-EIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~-~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
+...||-||||.|=++..++.. .+|+|.+++...-... .......|-.||..++.|.||++|..+.+ .
T Consensus 424 ~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtk----------QqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k 493 (732)
T KOG0614|consen 424 RIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTK----------QQEHVFSERNIMMECRSDFIVRLYRTFRDSK 493 (732)
T ss_pred hhhhcccCccceEEEEEecccchHHHHHHHhHhhccchh----------HHHHHHhHHHHHHhcCchHHHHHHHHhccch
Confidence 3467999999999999887522 3899999876542221 13457789999999999999999998877 7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|++||-|-||.|...|+.. ..++......++..+++|+.|||+ +|||+|||||+|.+||.+|.+||.|||+|+
T Consensus 494 yvYmLmEaClGGElWTiLrdR---g~Fdd~tarF~~acv~EAfeYLH~--k~iIYRDLKPENllLd~~Gy~KLVDFGFAK 568 (732)
T KOG0614|consen 494 YVYMLMEACLGGELWTILRDR---GSFDDYTARFYVACVLEAFEYLHR--KGIIYRDLKPENLLLDNRGYLKLVDFGFAK 568 (732)
T ss_pred hhhhhHHhhcCchhhhhhhhc---CCcccchhhhhHHHHHHHHHHHHh--cCceeccCChhheeeccCCceEEeehhhHH
Confidence 889999999999999999984 459999999999999999999999 999999999999999999999999999999
Q ss_pred ccccCCcceeeeccCCCCCCCCCcc-cccCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccch
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE-~~~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
...... .+.+++||+.|.||| +++.+.+.++|.||||+++||||||.+||.+.++...+..+..+-..+
T Consensus 569 ki~~g~----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i------ 638 (732)
T KOG0614|consen 569 KIGSGR----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI------ 638 (732)
T ss_pred HhccCC----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh------
Confidence 887654 366799999999999 567778999999999999999999999999999877777765421111
Q ss_pred hccCCChhHHHHHHHHHHHhhhccCcCCCCC
Q psy5603 411 EAGEWNETHVETLISIVFEKCCVFEKDKRAS 441 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs 441 (455)
.+ +..+.....+||.+.|..+|..|..
T Consensus 639 ---~~-Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 639 ---EF-PRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---hc-ccccchhHHHHHHHHHhcCcHhhhc
Confidence 11 1334555788899999999999865
No 370
>KOG0666|consensus
Probab=100.00 E-value=1e-35 Score=274.86 Aligned_cols=203 Identities=24% Similarity=0.337 Sum_probs=164.6
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
|++..+||+|+||.||+|..++ .+.+|||+++...+...- .....+|+..++.++||||+.+..
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi-----------S~SAcREiaL~REl~h~nvi~Lv~ 94 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI-----------SMSACREIALLRELKHPNVISLVK 94 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc-----------CHHHHHHHHHHHHhcCCcchhHHH
Confidence 4556889999999999996542 236899999765442111 234779999999999999999998
Q ss_pred ccc--CceeEEEEEeccCCCHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC---
Q psy5603 247 LCN--NIMNCIVYEYMCNGSLYDRLARVNN--TPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN--- 319 (455)
Q Consensus 247 ~~~--~~~~~lV~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~--- 319 (455)
++. +...++++||.+ -+|.+.++-... ...++...+.+|+.||+.|+.|||+ +-|+||||||+|||+..+
T Consensus 95 Vfl~~d~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~--NWvlHRDLKPaNIlvmgdgpe 171 (438)
T KOG0666|consen 95 VFLSHDKKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS--NWVLHRDLKPANILVMGDGPE 171 (438)
T ss_pred HHhccCceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh--hheeeccCCcceEEEeccCCc
Confidence 654 478899999995 578888754332 4568899999999999999999999 679999999999999776
Q ss_pred -CceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCC
Q psy5603 320 -FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDN 388 (455)
Q Consensus 320 -~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~ 388 (455)
|.+||+|||++|.....-..-.....++-|..|.|||++.| .++.+.|+||+|||+.||||-.+-|.+.
T Consensus 172 rG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~ 243 (438)
T KOG0666|consen 172 RGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGR 243 (438)
T ss_pred cCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccch
Confidence 99999999999987654322223355678999999997655 5889999999999999999999988754
No 371
>KOG0607|consensus
Probab=100.00 E-value=9e-35 Score=269.43 Aligned_cols=258 Identities=24% Similarity=0.359 Sum_probs=200.0
Q ss_pred eeeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEE-EcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHH
Q psy5603 153 AFTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGK-LKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQ 231 (455)
Q Consensus 153 ~~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~-~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~ 231 (455)
.=.+.|+-+.|. +.||+|+++.|-.+. ..+|..||||++.+... ....+..+|++
T Consensus 72 ~g~F~d~YkLt~-----------e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g-------------HsR~RvfREVe 127 (463)
T KOG0607|consen 72 SGKFEDMYKLTS-----------ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG-------------HSRSRVFREVE 127 (463)
T ss_pred cchHHHHHHhHH-----------HHhcCccceeeeeeeeeccchhhhhhhhhcCCc-------------hHHHHHHHHHH
Confidence 345677777775 669999999999886 45789999999965422 11455789999
Q ss_pred HHhhC-CccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCC
Q psy5603 232 TLSQC-KHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV 309 (455)
Q Consensus 232 ~l~~l-~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Di 309 (455)
++.+| .|+||+.+++|+.+ ...|||||-|.||+|..++... ..+++..+..++..|+.||.|||. +||.|||+
T Consensus 128 ~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~---~~F~E~EAs~vvkdia~aLdFlH~--kgIAHRDl 202 (463)
T KOG0607|consen 128 TFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKR---KHFNEREASRVVKDIASALDFLHT--KGIAHRDL 202 (463)
T ss_pred HHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHh---hhccHHHHHHHHHHHHHHHHHHhh--cCcccccC
Confidence 99999 59999999999988 7889999999999999999884 459999999999999999999999 99999999
Q ss_pred CCCcEEEcCC---CceEEeecccccccccCCc----ceeeeccCCCCCCCCCcccc---cC---CCCcccchHHHHHHHH
Q psy5603 310 KSANVLLDEN---FVPKLGDFGIVKMSETSNM----KTMYTENLTGTRPYMPPEAM---HC---QISTKTDVFSYGVILL 376 (455)
Q Consensus 310 kp~NILl~~~---~~~kl~DFGla~~~~~~~~----~~~~~~~~~gt~~Y~aPE~~---~~---~~~~~sDv~SlGvvl~ 376 (455)
||+|||-... .-+|||||.+..-...... .+..-.+.+|+..|||||+. .+ .|+.+.|.||||||||
T Consensus 203 KPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlY 282 (463)
T KOG0607|consen 203 KPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILY 282 (463)
T ss_pred CccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHH
Confidence 9999999644 3689999987643222111 11222457899999999954 33 3678999999999999
Q ss_pred HHHcCCCCCCCCcc---------------hhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCC
Q psy5603 377 ELLTGMKPIDDNNT---------------ILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRAS 441 (455)
Q Consensus 377 elltG~~p~~~~~~---------------~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs 441 (455)
-||+|.+||.++-. ......++++...+ .+.....++...++|+...+..++.+|.+
T Consensus 283 ImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeF--------PdkdWahIS~eakdlisnLlvrda~~rls 354 (463)
T KOG0607|consen 283 IMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEF--------PDKDWAHISSEAKDLISNLLVRDAKQRLS 354 (463)
T ss_pred HHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcC--------ChhhhHHhhHHHHHHHHHHHhccHHhhhh
Confidence 99999999987531 11111122111111 11223567888999999999999999999
Q ss_pred HHHHHH
Q psy5603 442 MRDIVD 447 (455)
Q Consensus 442 ~~evl~ 447 (455)
+.+|++
T Consensus 355 a~~vln 360 (463)
T KOG0607|consen 355 AAQVLN 360 (463)
T ss_pred hhhccC
Confidence 998875
No 372
>KOG1035|consensus
Probab=100.00 E-value=2.8e-35 Score=312.03 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=185.6
Q ss_pred eeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHH
Q psy5603 154 FTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT 232 (455)
Q Consensus 154 ~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 232 (455)
+......+...+|.+. ..||+||||.||+++.+ +|+.||||++..... ........+|+..
T Consensus 469 ~~~r~~SRY~~DFEEL------~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s------------~~~~skI~rEVk~ 530 (1351)
T KOG1035|consen 469 PLQRQFSRYLNDFEEL------ELLGKGGFGSVVKVRNKLDGREYAIKKIPLKAS------------DKLYSKILREVKL 530 (1351)
T ss_pred ccccchhhHhhhhHHH------HHhcCCCCceEEEEeecccchhhhhhhccCchH------------HHHHHHHHHHHHH
Confidence 3344445666777666 89999999999999977 799999999975541 1113447889999
Q ss_pred HhhCCccceeeeccccc---------------------------------------------------------------
Q psy5603 233 LSQCKHVNLLRLLGLCN--------------------------------------------------------------- 249 (455)
Q Consensus 233 l~~l~h~niv~l~~~~~--------------------------------------------------------------- 249 (455)
+++++|||||+++..+.
T Consensus 531 LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~ 610 (1351)
T KOG1035|consen 531 LARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKA 610 (1351)
T ss_pred HhhcCCcceeeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccc
Confidence 99999999999862110
Q ss_pred -------------------------------------------------C--------ceeEEEEEeccCCCHHHHHhhc
Q psy5603 250 -------------------------------------------------N--------IMNCIVYEYMCNGSLYDRLARV 272 (455)
Q Consensus 250 -------------------------------------------------~--------~~~~lV~e~~~~gsL~~~l~~~ 272 (455)
+ ...|+=||||+..+|.+++.+.
T Consensus 611 ~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N 690 (1351)
T KOG1035|consen 611 SYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN 690 (1351)
T ss_pred cccccCCcccccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc
Confidence 0 1135678999888888877763
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc----c----------CCc
Q psy5603 273 NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE----T----------SNM 338 (455)
Q Consensus 273 ~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~----~----------~~~ 338 (455)
... -.....++++.+|+.||.|+|+ +|||||||||.||+||+++.+||+|||+|.... . ...
T Consensus 691 ~~~--~~~d~~wrLFreIlEGLaYIH~--~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g 766 (1351)
T KOG1035|consen 691 HFN--SQRDEAWRLFREILEGLAYIHD--QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAG 766 (1351)
T ss_pred ccc--hhhHHHHHHHHHHHHHHHHHHh--CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccC
Confidence 211 1467889999999999999999 889999999999999999999999999998721 0 000
Q ss_pred -ceeeeccCCCCCCCCCcccccC----CCCcccchHHHHHHHHHHHcCCCCCCCCcch-hhHHHhhhcccch-hhccchh
Q psy5603 339 -KTMYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVEQEVPV-REVLDKE 411 (455)
Q Consensus 339 -~~~~~~~~~gt~~Y~aPE~~~~----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~-~~~~d~~ 411 (455)
.....+..+||.-|+|||++.+ .++.|+|+||||||++||+. ||.....- ...........+. ..+.++.
T Consensus 767 ~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~ 843 (1351)
T KOG1035|consen 767 SNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPE 843 (1351)
T ss_pred CCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCccccccc
Confidence 1112345789999999998854 47889999999999999994 56544311 1111111111111 1222222
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
. + .-..+|.+++.+||.+|||+.|+++
T Consensus 844 ~--------~-~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 844 H--------P-EEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred c--------h-HHHHHHHHHhcCCCccCCCHHHHhh
Confidence 2 1 1344688999999999999999975
No 373
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.5e-34 Score=309.23 Aligned_cols=145 Identities=29% Similarity=0.340 Sum_probs=125.8
Q ss_pred CcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
|.+.++||+|+||.||+|.+. +++.||||+++...... ......+.+|+.++..++||||+++++++..
T Consensus 6 y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~----------~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 75 (669)
T cd05610 6 FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMIN----------KNMVHQVQAERDALALSKSPFIVHLYYSLQS 75 (669)
T ss_pred EEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccC----------HHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE
Confidence 456689999999999999987 48899999996532210 1114568899999999999999999987766
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
...|+||||+.|++|.+++... ..+++..++.|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||+
T Consensus 76 ~~~~~lVmEy~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~--~gIiHrDLKP~NILl~~~g~vkL~DFGl 150 (669)
T cd05610 76 ANNVYLVMEYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHR--HGIIHRDLKPDNMLISNEGHIKLTDFGL 150 (669)
T ss_pred CCEEEEEEeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh--CCEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence 7889999999999999999763 358899999999999999999999 7899999999999999999999999999
Q ss_pred cc
Q psy5603 330 VK 331 (455)
Q Consensus 330 a~ 331 (455)
++
T Consensus 151 s~ 152 (669)
T cd05610 151 SK 152 (669)
T ss_pred Cc
Confidence 86
No 374
>KOG1025|consensus
Probab=100.00 E-value=4.9e-35 Score=298.72 Aligned_cols=253 Identities=25% Similarity=0.391 Sum_probs=203.1
Q ss_pred CCccCcCCCeEEEEEEEc-C----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 175 GNKLGEGQFGTVYYGKLK-N----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
.++||+|+||+||+|.|- . .-+||||++......+. ...+..|+-+|.+++|||+++++|+|.
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~------------s~e~LdeAl~masldHpnl~RLLgvc~ 768 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKA------------SIELLDEALRMASLDHPNLLRLLGVCM 768 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchh------------hHHHHHHHHHHhcCCCchHHHHhhhcc
Confidence 488999999999999873 2 35789999875543211 345899999999999999999999999
Q ss_pred CceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q psy5603 250 NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGI 329 (455)
Q Consensus 250 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGl 329 (455)
....-||.+||++|+|.|+++..+ .++-....+.|..|||+|+.|||. +.++||||-..|||+..-..+||.|||+
T Consensus 769 ~s~~qlvtq~mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~--qrlVHrdLaaRNVLVksP~hvkitdfgl 844 (1177)
T KOG1025|consen 769 LSTLQLVTQLMPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEE--QRLVHRDLAARNVLVKSPNHVKITDFGL 844 (1177)
T ss_pred cchHHHHHHhcccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHh--cchhhhhhhhhheeecCCCeEEEEecch
Confidence 988889999999999999998754 478889999999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 330 VKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 330 a~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
++....... ........-.+.|||-|.+ ...++.+||||||||++||++| |..||++...........
T Consensus 845 a~ll~~d~~-ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle--------- 914 (1177)
T KOG1025|consen 845 AKLLAPDEK-EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLE--------- 914 (1177)
T ss_pred hhccCcccc-cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHh---------
Confidence 997765542 2222233334568888844 5678999999999999999999 999999887543332222
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhcC
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVNN 455 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~~ 455 (455)
..-+...+.-++-.+..++.+||..|++.||+++++...+.+..++
T Consensus 915 --~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 915 --KGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred --ccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 2212223334455566678899999999999999999999887653
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5e-34 Score=269.31 Aligned_cols=218 Identities=20% Similarity=0.216 Sum_probs=172.1
Q ss_pred CCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEEEEE
Q psy5603 181 GQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCIVYE 258 (455)
Q Consensus 181 G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e 258 (455)
|.||.||++.++ +++.||+|+++.... +.+|...+....||||+++++++.+ ...|+|||
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~------------------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 65 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE------------------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQ 65 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh------------------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEe
Confidence 899999999986 488999999864321 3345555566679999999998776 78899999
Q ss_pred eccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCc
Q psy5603 259 YMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNM 338 (455)
Q Consensus 259 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~ 338 (455)
|++||+|.+++... .++++..+..++.|++.||.|||+ ++++||||||+||+++.++.++++|||++......
T Consensus 66 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~ql~~~l~~lH~--~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-- 138 (237)
T cd05576 66 HAEGGKLWSHISKF---LNIPEECVKRWAAEMVVALDALHR--EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-- 138 (237)
T ss_pred cCCCCCHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHEEEcCCCCEEEecccchhccccc--
Confidence 99999999999763 358999999999999999999999 88999999999999999999999999987654332
Q ss_pred ceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCCh
Q psy5603 339 KTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNE 417 (455)
Q Consensus 339 ~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 417 (455)
.....++..|+|||... +.++.++|+||+|+++|||++|..|+......... .....+ +
T Consensus 139 ----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~----~~~~~~------------~ 198 (237)
T cd05576 139 ----CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINT----HTTLNI------------P 198 (237)
T ss_pred ----cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhccc----ccccCC------------c
Confidence 12335677899999764 45788999999999999999999887643211000 000001 1
Q ss_pred hHHHHHHHHHHHhhhccCcCCCCCHH
Q psy5603 418 THVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 418 ~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
..++..+.++|.+|+..||++||++.
T Consensus 199 ~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 199 EWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred ccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 12345578899999999999999973
No 376
>KOG0604|consensus
Probab=100.00 E-value=1e-34 Score=267.18 Aligned_cols=239 Identities=25% Similarity=0.302 Sum_probs=190.9
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC---
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--- 250 (455)
.+||-|--|.|-.+..+ +++.+|+|++.. .....+|++.=-.. .|||||.+++++.+
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~D------------------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~ 129 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLD------------------SPKARREVELHWMASGHPHIVSIIDVYENSYQ 129 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhc------------------CHHHHhHhhhhhhhcCCCceEEeehhhhhhcc
Confidence 78999999999999877 588999999852 12266788765444 69999999997654
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc---CCCceEEe
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD---ENFVPKLG 325 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~---~~~~~kl~ 325 (455)
..+.+|||+|.||.|+.++..++ ..++++.++..|+.||..|+.|||+ .+|.||||||+|+|.. .|..+||+
T Consensus 130 ~rkcLLiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~--~nIAHRDlKpENLLyt~t~~na~lKLt 206 (400)
T KOG0604|consen 130 GRKCLLIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHS--MNIAHRDLKPENLLYTTTSPNAPLKLT 206 (400)
T ss_pred CceeeEeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHh--cchhhccCChhheeeecCCCCcceEec
Confidence 45568999999999999999865 4679999999999999999999999 7899999999999995 45689999
Q ss_pred ecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch----hhHHHhhhc
Q psy5603 326 DFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI----LYYYLVVEQ 400 (455)
Q Consensus 326 DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~----~~~~~~~~~ 400 (455)
|||+|+...... .-.+.+-|+.|.|||++.. +++...|+||+||++|-||+|.+||..+... -+...+..+
T Consensus 207 DfGFAK~t~~~~----~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~g 282 (400)
T KOG0604|consen 207 DFGFAKETQEPG----DLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTG 282 (400)
T ss_pred ccccccccCCCc----cccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhcc
Confidence 999998655322 1235688999999998854 5788889999999999999999999876531 111111111
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...+ .....+++++..+++|+++|..+|.+|.++.++++
T Consensus 283 qy~F--------P~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 283 QYEF--------PEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred CccC--------CChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 1111 11123678889999999999999999999999875
No 377
>KOG1151|consensus
Probab=100.00 E-value=3.9e-35 Score=281.77 Aligned_cols=281 Identities=26% Similarity=0.346 Sum_probs=210.3
Q ss_pred ceeeeHHHHHHHhcC----CCCCC----CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhh
Q psy5603 151 LIAFTFCDLERATDG----FNRKP----YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMI 221 (455)
Q Consensus 151 ~~~~~~~~l~~~t~~----f~~~~----~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~ 221 (455)
+...-..||.++.+. |..-| +|-..++||+|||+.||++.+- ..+.||||+-.......+.+. ..
T Consensus 436 vrnlHiRELKRi~NEdnSQFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKK------eN 509 (775)
T KOG1151|consen 436 VRNLHIRELKRIHNEDNSQFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKK------EN 509 (775)
T ss_pred HHHHHHHHHHhhcccchhhhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhh------hh
Confidence 344555666666543 43333 2456788999999999999975 367899998765443322211 11
Q ss_pred hHHHHHHHHHHHhhCCccceeeecccc-cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy5603 222 PILLFENEVQTLSQCKHVNLLRLLGLC-NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHS 299 (455)
Q Consensus 222 ~~~~~~~E~~~l~~l~h~niv~l~~~~-~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~ 299 (455)
-.+...+|..|-+.+.||.||++|+|+ .+ ...|-|+|||+|.+|.-+|.. ...+++..+..|+.||+.||.||.+
T Consensus 510 YhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQ---hklmSEKEARSIiMQiVnAL~YLNE 586 (775)
T KOG1151|consen 510 YHKHACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQ---HKLMSEKEARSIIMQIVNALKYLNE 586 (775)
T ss_pred HHHHHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHh---hhhhhHHHHHHHHHHHHHHHHHHhc
Confidence 245578899999999999999999976 34 788999999999999999987 3468999999999999999999999
Q ss_pred CCCCeeecCCCCCcEEEc---CCCceEEeecccccccccCCcc----eeeeccCCCCCCCCCcccc-cC----CCCcccc
Q psy5603 300 LSKPIIHRDVKSANVLLD---ENFVPKLGDFGIVKMSETSNMK----TMYTENLTGTRPYMPPEAM-HC----QISTKTD 367 (455)
Q Consensus 300 ~~~~iiH~Dikp~NILl~---~~~~~kl~DFGla~~~~~~~~~----~~~~~~~~gt~~Y~aPE~~-~~----~~~~~sD 367 (455)
...+|||-||||.||||- ..|.+||.|||+++........ -..++...||..|+|||.| .+ +.+.|+|
T Consensus 587 ikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVD 666 (775)
T KOG1151|consen 587 IKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVD 666 (775)
T ss_pred cCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCcccccee
Confidence 878999999999999994 4589999999999987665432 2346778999999999954 33 4688999
Q ss_pred hHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 368 VFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 368 v~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
|||+|||+|.++.|+.||..+-..... . ++..+.... .....+...++...+++|.+||+...++|....++.
T Consensus 667 VWSvGVIFyQClYGrKPFGhnqsQQdI-L---qeNTIlkAt--EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 667 VWSVGVIFYQCLYGRKPFGHNQSQQDI-L---QENTILKAT--EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred eEeeehhhhhhhccCCCCCCchhHHHH-H---hhhchhcce--eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 999999999999999999876421111 0 011111110 011122345566788899999999999999887764
No 378
>KOG0200|consensus
Probab=100.00 E-value=7.9e-34 Score=301.38 Aligned_cols=253 Identities=29% Similarity=0.457 Sum_probs=199.7
Q ss_pred CCCccCcCCCeEEEEEEEcC--------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeee
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN--------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRL 244 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l 244 (455)
+.+.||+|.||.|++|..+. ...||||.++..... .....+..|+++++.+ .|+||+.+
T Consensus 300 ~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~------------~~~~~~~~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 300 LGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS------------SEKKDLMSELNVLKELGKHPNIVNL 367 (609)
T ss_pred ccceeecccccceEeEEEeecccccccceEEEEEEecccccCc------------HHHHHHHHHHHHHHHhcCCcchhhh
Confidence 44689999999999998531 357999999765442 1145699999999998 69999999
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcC---C--C--------CCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCC
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVN---N--T--------PPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK 310 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~---~--~--------~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dik 310 (455)
+|+|.. +..++|.||+..|+|.++|.... . . ..++....+.++.|||.|++||++ .++|||||-
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~--~~~vHRDLA 445 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS--VPCVHRDLA 445 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh--CCccchhhh
Confidence 999988 88899999999999999998765 0 1 248999999999999999999999 889999999
Q ss_pred CCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCC--CCCccccc-CCCCcccchHHHHHHHHHHHc-CCCCCC
Q psy5603 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRP--YMPPEAMH-CQISTKTDVFSYGVILLELLT-GMKPID 386 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~--Y~aPE~~~-~~~~~~sDv~SlGvvl~ellt-G~~p~~ 386 (455)
..|||+.++..+||+|||+|+.......... ..-.|+.+ |||||.+. ..++.+||||||||+||||+| |..||.
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~--~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp 523 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRT--KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYP 523 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEe--cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCC
Confidence 9999999999999999999997655443221 12233343 99999664 478999999999999999999 999998
Q ss_pred CCc-chhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 387 DNN-TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 387 ~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
+.. ...... .+........+..+...+.+++..||+.+|++||++.++.+.|+..+
T Consensus 524 ~~~~~~~l~~-----------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 524 GIPPTEELLE-----------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred CCCcHHHHHH-----------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 743 111111 11111112223344556778999999999999999999999998865
No 379
>KOG4236|consensus
Probab=100.00 E-value=9.8e-35 Score=283.99 Aligned_cols=242 Identities=26% Similarity=0.341 Sum_probs=191.0
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~ 253 (455)
+.||+|.||+||-|.++ +|+.||||++.+...... . ..++.+|+.||.+++||.||.+--.|.. +..
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~k-q----------esqlR~EVaILq~l~HPGiV~le~M~ET~erv 638 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTK-Q----------ESQLRNEVAILQNLHHPGIVNLECMFETPERV 638 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCc-h----------HHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence 68999999999999875 699999999975443111 1 3458899999999999999999988888 788
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC---CceEEeecccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN---FVPKLGDFGIV 330 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~---~~~kl~DFGla 330 (455)
+.|||-+.|.=|+-.|... .+.+++..-..++.||+.||.|||- ++|+|+||||+||||... -.+||||||+|
T Consensus 639 FVVMEKl~GDMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~--knIvHCDLKPENVLLas~~~FPQvKlCDFGfA 714 (888)
T KOG4236|consen 639 FVVMEKLHGDMLEMILSSE--KGRLPERITKFLVTQILVALRYLHF--KNIVHCDLKPENVLLASASPFPQVKLCDFGFA 714 (888)
T ss_pred EEEehhhcchHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhh--cceeeccCCchheeeccCCCCCceeeccccce
Confidence 9999999554444444443 3479999999999999999999999 899999999999999643 47999999999
Q ss_pred cccccCCcceeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLD 409 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d 409 (455)
|+.+.... ...++||++|+|||++. .+++...|+||.||++|--|+|..||.+....- ..+++.. ++
T Consensus 715 RiIgEksF----RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn--dQIQNAa-----FM- 782 (888)
T KOG4236|consen 715 RIIGEKSF----RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN--DQIQNAA-----FM- 782 (888)
T ss_pred eecchhhh----hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh--HHhhccc-----cc-
Confidence 99876542 45689999999999764 567888899999999999999999998764321 1111111 11
Q ss_pred hhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 410 KEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 410 ~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
....+...++...-+||...|+..-++|-+++.-+
T Consensus 783 --yPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 783 --YPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred --cCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 12223356677788889999999988998887654
No 380
>KOG0669|consensus
Probab=100.00 E-value=2.2e-35 Score=265.61 Aligned_cols=259 Identities=24% Similarity=0.376 Sum_probs=189.6
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
+...+||+|.||.||+|+.++ |+.||+|++-..... .-.++. ..+|+++|..++|+|++.+++.|..
T Consensus 20 ek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK----------eGfpit-alreikiL~~lkHenv~nliEic~tk 88 (376)
T KOG0669|consen 20 EKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK----------EGFPIT-ALREIKILQLLKHENVVNLIEICRTK 88 (376)
T ss_pred HHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc----------cCCcHH-HHHHHHHHHHhcchhHHHHHHHHhhc
Confidence 334789999999999999764 788999876432221 111122 5689999999999999999987732
Q ss_pred --------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 251 --------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 251 --------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
...|+|+.+|+ -+|.-+|... ...++...+.+++.+++.||.|+|+ ..|+|||+|++|+|++.+|.+
T Consensus 89 ~Tp~~r~r~t~ylVf~~ce-hDLaGlLsn~--~vr~sls~Ikk~Mk~Lm~GL~~iHr--~kilHRDmKaaNvLIt~dgil 163 (376)
T KOG0669|consen 89 ATPTNRDRATFYLVFDFCE-HDLAGLLSNR--KVRFSLSEIKKVMKGLMNGLYYIHR--NKILHRDMKAANVLITKDGIL 163 (376)
T ss_pred cCCcccccceeeeeHHHhh-hhHHHHhcCc--cccccHHHHHHHHHHHHHHHHHHHH--hhHHhhcccHhhEEEcCCceE
Confidence 34689999995 5788877653 2468999999999999999999999 779999999999999999999
Q ss_pred EEeecccccccccCCcce-eeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh
Q psy5603 323 KLGDFGIVKMSETSNMKT-MYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~-~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~ 399 (455)
||+|||++|......... ......+-|..|++||.+.| .++++.|+|+.|||+.||.||.+-+.++........+..
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~ 243 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQ 243 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHH
Confidence 999999998665443211 11233456999999996655 589999999999999999999999998874333222211
Q ss_pred --c-----------ccchhhccchh-ccCCChhHH---------HHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 400 --Q-----------EVPVREVLDKE-AGEWNETHV---------ETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 400 --~-----------~~~~~~~~d~~-~~~~~~~~~---------~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ +.++-+.+... ++......+ .....+|+.+++..||.+|+.++++++
T Consensus 244 LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 244 LCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred HhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 0 01111111111 111111111 124567899999999999999999875
No 381
>KOG0662|consensus
Probab=100.00 E-value=1.9e-33 Score=241.40 Aligned_cols=254 Identities=23% Similarity=0.300 Sum_probs=191.7
Q ss_pred CCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc-cCce
Q psy5603 175 GNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC-NNIM 252 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~ 252 (455)
.++||+|.||+||+|+.+ +++.||+|.++-+.....- -....+|+-+++.++|.|||++++.. .+..
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegv-----------pssalreicllkelkhknivrl~dvlhsdkk 75 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGV-----------PSSALREICLLKELKHKNIVRLHDVLHSDKK 75 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCC-----------cHHHHHHHHHHHHhhhcceeehhhhhccCce
Confidence 378999999999999866 4788999999865432111 23378999999999999999999965 4588
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..+|+||| ..+|..+..... +.++...+..++.|+++||.|+|+ +++.|||+||.|+|++.+|..|++|||+++.
T Consensus 76 ltlvfe~c-dqdlkkyfdsln--g~~d~~~~rsfmlqllrgl~fchs--hnvlhrdlkpqnllin~ngelkladfglara 150 (292)
T KOG0662|consen 76 LTLVFEFC-DQDLKKYFDSLN--GDLDPEIVRSFMLQLLRGLGFCHS--HNVLHRDLKPQNLLINRNGELKLADFGLARA 150 (292)
T ss_pred eEEeHHHh-hHHHHHHHHhcC--CcCCHHHHHHHHHHHHhhhhhhhh--hhhhhccCCcceEEeccCCcEEecccchhhh
Confidence 89999999 578888777654 368999999999999999999999 8899999999999999999999999999997
Q ss_pred cccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhh--c---c---
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVE--Q---E--- 401 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~--~---~--- 401 (455)
.+... ...+.-+-|..|.||.++.| -+++..|+||.||++.|+.. |++.|.+.+.......+.. + +
T Consensus 151 fgipv---rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~w 227 (292)
T KOG0662|consen 151 FGIPV---RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQW 227 (292)
T ss_pred cCCce---EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccC
Confidence 76532 12334467899999997655 37889999999999999998 8888887763322222221 1 1
Q ss_pred cchhhccchhc-cCCCh--------hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 402 VPVREVLDKEA-GEWNE--------THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 402 ~~~~~~~d~~~-~~~~~--------~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+...-|-.+ ..++. ......-++|+.+.+.-+|.+|.++++.++
T Consensus 228 ps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 228 PSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11112222111 11111 122233567888999999999999988764
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=5.8e-33 Score=292.13 Aligned_cols=256 Identities=20% Similarity=0.215 Sum_probs=163.3
Q ss_pred CCCcCCCccCcCCCeEEEEEEEcC-----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeee
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLKN-----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRL 244 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~~-----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 244 (455)
..|++.++||+|+||.||+|.+.+ +..||||++..... ...+.++ .+.+..+.++..+
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---------------~e~~~~e--~l~~~~~~~~~~~ 194 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---------------VEIWMNE--RVRRACPNSCADF 194 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---------------hHHHHHH--HHHhhchhhHHHH
Confidence 345677999999999999999863 58899999753211 0001111 1112222222222
Q ss_pred ccc-------ccCceeEEEEEeccCCCHHHHHhhcCC-----------------CCCCCHHHHHHHHHHHHHHHHHHHcC
Q psy5603 245 LGL-------CNNIMNCIVYEYMCNGSLYDRLARVNN-----------------TPPLDSNKRYSIALGVAEALHYLHSL 300 (455)
Q Consensus 245 ~~~-------~~~~~~~lV~e~~~~gsL~~~l~~~~~-----------------~~~l~~~~~~~i~~~i~~gl~~LH~~ 300 (455)
+.. ..+...++||||+.+++|.+++..... ........+..++.|++.||.|||+
T Consensus 195 ~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~- 273 (566)
T PLN03225 195 VYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS- 273 (566)
T ss_pred HHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH-
Confidence 221 122678999999999999999875321 0111234566899999999999999
Q ss_pred CCCeeecCCCCCcEEEcC-CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-------------------
Q psy5603 301 SKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------------------- 360 (455)
Q Consensus 301 ~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------------------- 360 (455)
++|+||||||+|||++. ++.+||+|||+++...... ........||+.|+|||.+..
T Consensus 274 -~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~ 350 (566)
T PLN03225 274 -TGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPV 350 (566)
T ss_pred -CCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--ccCCcccccCCCccChHHhhccCCCCCCccccccccccch
Confidence 88999999999999985 6899999999997553322 112345689999999995421
Q ss_pred ----CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchh---hccchhccC-----CC-hhHHHHHHHHH
Q psy5603 361 ----QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVR---EVLDKEAGE-----WN-ETHVETLISIV 427 (455)
Q Consensus 361 ----~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~---~~~d~~~~~-----~~-~~~~~~~l~~L 427 (455)
.++.++|||||||+||||+++..|++...... ............ ......... +. .+.......+|
T Consensus 351 l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dL 429 (566)
T PLN03225 351 LWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQF-NRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWEL 429 (566)
T ss_pred hccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHH-HHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHH
Confidence 12345699999999999999877655331111 111111111111 111111000 00 00112234579
Q ss_pred HHhhhccCcCCCCCHHHHHH
Q psy5603 428 FEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 428 i~~~l~~dp~~RPs~~evl~ 447 (455)
|.+|+..||++|||++++++
T Consensus 430 i~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 430 LKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHccCCcccCCCHHHHhC
Confidence 99999999999999999976
No 383
>KOG0603|consensus
Probab=100.00 E-value=1.9e-33 Score=282.79 Aligned_cols=234 Identities=24% Similarity=0.288 Sum_probs=188.0
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLC 248 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 248 (455)
-|+....+|.|+||.|-.+.+. +++..+||++..... + -.+|+.++... .||||+++.+.+
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~-----------~~~e~~~~~~~~~h~niv~~~~v~ 385 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------D-----------NQDEIPISLLVRDHPNIVKSHDVY 385 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheecccccc------c-----------cccccchhhhhcCCCcceeeccee
Confidence 3566778999999999999876 478899999975522 1 23577676666 799999999988
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE-cCCCceEEee
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL-DENFVPKLGD 326 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl-~~~~~~kl~D 326 (455)
.+ .+.++|||.+.|+-|.+.+.... .....+..|+.+|+.|+.|||+ +|+|||||||+|||+ +..++++|+|
T Consensus 386 ~~~~~~~~v~e~l~g~ell~ri~~~~----~~~~e~~~w~~~lv~Av~~LH~--~gvvhRDLkp~NIL~~~~~g~lrlty 459 (612)
T KOG0603|consen 386 EDGKEIYLVMELLDGGELLRRIRSKP----EFCSEASQWAAELVSAVDYLHE--QGVVHRDLKPGNILLDGSAGHLRLTY 459 (612)
T ss_pred cCCceeeeeehhccccHHHHHHHhcc----hhHHHHHHHHHHHHHHHHHHHh--cCeeecCCChhheeecCCCCcEEEEE
Confidence 88 88899999999999999887633 2337788899999999999999 899999999999999 6999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch-hhHHHhhhcccch
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~-~~~~~~~~~~~~~ 404 (455)
||.++...... ...+-|..|.|||++.. .++.++||||||++||+||+|+.||...... .....+ ....+
T Consensus 460 FG~a~~~~~~~------~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i--~~~~~ 531 (612)
T KOG0603|consen 460 FGFWSELERSC------DTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI--QMPKF 531 (612)
T ss_pred echhhhCchhh------cccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh--cCCcc
Confidence 99988765542 12366888999997754 6899999999999999999999999876543 111111 11111
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...++...++||.+||+.||.+||++.++..
T Consensus 532 ------------s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 532 ------------SECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ------------ccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 1456777999999999999999999999853
No 384
>KOG0587|consensus
Probab=100.00 E-value=5e-33 Score=286.87 Aligned_cols=249 Identities=24% Similarity=0.370 Sum_probs=201.0
Q ss_pred CCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccc
Q psy5603 170 PYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGL 247 (455)
Q Consensus 170 ~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 247 (455)
+.+++...||.|.+|.||+++.+ +++.+|||+....... ......|..+++.. .|||++.++|+
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~--------------deEiE~eynil~~~~~hpnv~~fyg~ 84 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE--------------EEEIELEYNMLKKYSHHPNVATFYGA 84 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc--------------cHHHHHHHHHHHhccCCCCcceEEEE
Confidence 34466799999999999999865 5888999998654331 12256688888776 79999999996
Q ss_pred c------cCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 248 C------NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 248 ~------~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
+ .+++++||||||.|||..|++.... +..+.|..+..|+.++++|+.+||. ..+||||||-.|||++.++.
T Consensus 85 ~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~--nkviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 85 FIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHN--NKVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred EEEecCCCCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhh--cceeeecccCceEEEeccCc
Confidence 5 3378899999999999999998766 6789999999999999999999999 77999999999999999999
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCcccccC------CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHH
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC------QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~------~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~ 395 (455)
+||+|||++.-.... .....+..||+.|||||++.. .++..+|+||||++..||.-|.+|+.+........
T Consensus 162 VKLvDFGvSaQldsT---~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF 238 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDST---VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALF 238 (953)
T ss_pred EEEeeeeeeeeeecc---cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhc
Confidence 999999987654332 233566799999999998743 35668999999999999999999998876543333
Q ss_pred HhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+.. .+.+ ....+..+.+.+.++|..|+..|..+||++.++++
T Consensus 239 ~IpR--NPPP-------kLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 239 LIPR--NPPP-------KLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred cCCC--CCCc-------cccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 3221 1111 22234577888999999999999999999998865
No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=8.5e-32 Score=252.31 Aligned_cols=236 Identities=30% Similarity=0.455 Sum_probs=186.7
Q ss_pred CCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEEEEEe
Q psy5603 182 QFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCIVYEY 259 (455)
Q Consensus 182 ~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e~ 259 (455)
+||.||+|.... |+.||+|++........ ...+.+|++.+++++|+|++++++++.. ...++++||
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 68 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK------------RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEY 68 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH------------HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeC
Confidence 689999999874 89999999865432100 3458899999999999999999998877 788999999
Q ss_pred ccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcc
Q psy5603 260 MCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMK 339 (455)
Q Consensus 260 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~ 339 (455)
+.+++|.+++.... .+++..++.++.+++.++.+||+ .+++|+||+|.||+++.++.++|+|||.+.......
T Consensus 69 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-- 141 (244)
T smart00220 69 CDGGDLFDLLKKRG---RLSEDEARFYARQILSALEYLHS--NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-- 141 (244)
T ss_pred CCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH--cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--
Confidence 99999999987633 38999999999999999999999 789999999999999999999999999988665432
Q ss_pred eeeeccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCc-chhhHHHhhhcccchhhccchhccCCCh
Q psy5603 340 TMYTENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNN-TILYYYLVVEQEVPVREVLDKEAGEWNE 417 (455)
Q Consensus 340 ~~~~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 417 (455)
......|+..|+|||.+. ..++.++|+||||++++++++|..||.... .................. .
T Consensus 142 --~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~ 210 (244)
T smart00220 142 --LLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPP---------E 210 (244)
T ss_pred --ccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccc---------c
Confidence 123457888999999654 567889999999999999999999998733 222111111111110000 0
Q ss_pred hHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 418 THVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 418 ~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..++..+.+++.+|+..+|++||++.++++
T Consensus 211 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 211 WKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred ccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 003455788999999999999999999986
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.98 E-value=1.2e-31 Score=276.13 Aligned_cols=272 Identities=18% Similarity=0.120 Sum_probs=175.1
Q ss_pred CcCCCccCcCCCeEEEEEEE-----------------cCCcEEEEEEeecccCcCCCCCch-hhhhhhhHHHHHHHHHHH
Q psy5603 172 PRRGNKLGEGQFGTVYYGKL-----------------KNGMEIAVKTLENNANYSSSNSDN-TEAAMIPILLFENEVQTL 233 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~-----------------~~~~~vAvK~~~~~~~~~~~~~~~-~~~~~~~~~~~~~E~~~l 233 (455)
|++.++||+|+||.||+|.+ ..++.||||+++............ ..........+..|+.++
T Consensus 147 F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~~l 226 (507)
T PLN03224 147 FQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAYMC 226 (507)
T ss_pred ceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHHHH
Confidence 34559999999999999964 125679999986432210000000 000000112345677788
Q ss_pred hhCCccce-----eeeccccc---------CceeEEEEEeccCCCHHHHHhhcCC---------------------CCCC
Q psy5603 234 SQCKHVNL-----LRLLGLCN---------NIMNCIVYEYMCNGSLYDRLARVNN---------------------TPPL 278 (455)
Q Consensus 234 ~~l~h~ni-----v~l~~~~~---------~~~~~lV~e~~~~gsL~~~l~~~~~---------------------~~~l 278 (455)
.+++|.++ ++++++|. .+..++||||+++++|.+++....+ ...+
T Consensus 227 ~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~ 306 (507)
T PLN03224 227 AKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKR 306 (507)
T ss_pred HHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccC
Confidence 88876654 66677653 2467999999999999999875321 1234
Q ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccc
Q psy5603 279 DSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM 358 (455)
Q Consensus 279 ~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~ 358 (455)
++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||.+
T Consensus 307 ~~~~~~~i~~ql~~aL~~lH~--~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~--~~~~g~~tp~Y~aPE~l 382 (507)
T PLN03224 307 DINVIKGVMRQVLTGLRKLHR--IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF--NPLYGMLDPRYSPPEEL 382 (507)
T ss_pred CHHHHHHHHHHHHHHHHHHHH--CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc--CccccCCCcceeChhhh
Confidence 678899999999999999999 88999999999999999999999999998754332111 11223458899999965
Q ss_pred cCC-----------------------CCcccchHHHHHHHHHHHcCCC-CCCCCcchhhHHHhhhccc-chhhccchhcc
Q psy5603 359 HCQ-----------------------ISTKTDVFSYGVILLELLTGMK-PIDDNNTILYYYLVVEQEV-PVREVLDKEAG 413 (455)
Q Consensus 359 ~~~-----------------------~~~~sDv~SlGvvl~elltG~~-p~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~ 413 (455)
... ...+.|+||+||++|+|++|.. ||................. ....+......
T Consensus 383 ~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~ 462 (507)
T PLN03224 383 VMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYD 462 (507)
T ss_pred cCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCC
Confidence 321 1124799999999999999875 7754321111000000000 00000000000
Q ss_pred CCChhHHHHHHHHHHHhhhccCc---CCCCCHHHHHH
Q psy5603 414 EWNETHVETLISIVFEKCCVFEK---DKRASMRDIVD 447 (455)
Q Consensus 414 ~~~~~~~~~~l~~Li~~~l~~dp---~~RPs~~evl~ 447 (455)
....+..+....+|+.+++..+| .+|+|++|+++
T Consensus 463 ~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 463 FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 01122345668888999999764 68999999875
No 387
>KOG0671|consensus
Probab=99.98 E-value=1.3e-32 Score=261.03 Aligned_cols=254 Identities=21% Similarity=0.320 Sum_probs=190.5
Q ss_pred CCCCcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc--c----ce
Q psy5603 169 KPYPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH--V----NL 241 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~----ni 241 (455)
.+.|.+...+|+|+||.|-.+.+.. +..||||+++.-..+ .....-|++++.++.+ | -+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY--------------reAa~iEi~vLqki~~~DP~g~~rc 153 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY--------------REAALIEIEVLQKINESDPNGKFRC 153 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH--------------hhHHHHHHHHHHHHHhcCCCCceEE
Confidence 3556777999999999999998764 688999999743221 3345678999999832 2 35
Q ss_pred eeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC--
Q psy5603 242 LRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-- 318 (455)
Q Consensus 242 v~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-- 318 (455)
|.+.+++.- ++.|+|+|.+ |-|+.++|.... -.+++..++..++.|+++++.|||+ .+++|-||||+|||+-.
T Consensus 154 v~m~~wFdyrghiCivfell-G~S~~dFlk~N~-y~~fpi~~ir~m~~QL~~sv~fLh~--~kl~HTDLKPENILfvss~ 229 (415)
T KOG0671|consen 154 VQMRDWFDYRGHICIVFELL-GLSTFDFLKENN-YIPFPIDHIRHMGYQLLESVAFLHD--LKLTHTDLKPENILFVSSE 229 (415)
T ss_pred EeeehhhhccCceEEEEecc-ChhHHHHhccCC-ccccchHHHHHHHHHHHHHHHHHHh--cceeecCCChheEEEeccc
Confidence 666676765 8999999999 779999998744 4679999999999999999999999 77999999999999921
Q ss_pred ------------------CCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHH
Q psy5603 319 ------------------NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELL 379 (455)
Q Consensus 319 ------------------~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~ell 379 (455)
+..+||+|||.|++..... +.++.|..|.|||++.| +++..+||||+||||+|+.
T Consensus 230 ~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 230 YFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred eEEEeccCCccceeccCCCcceEEEecCCcceeccCc------ceeeeccccCCchheeccCcCCccCceeeeeEEEEee
Confidence 3468999999998754432 45788999999996655 8999999999999999999
Q ss_pred cCCCCCCCCcchh---hHHHhhhcccch--------hhccchhccC------------------------CChhHHHHHH
Q psy5603 380 TGMKPIDDNNTIL---YYYLVVEQEVPV--------REVLDKEAGE------------------------WNETHVETLI 424 (455)
Q Consensus 380 tG~~p~~~~~~~~---~~~~~~~~~~~~--------~~~~d~~~~~------------------------~~~~~~~~~l 424 (455)
||...|...+... +...+. ++.+. .+++...--. ...+.....+
T Consensus 304 tG~~LFqtHen~EHLaMMerIl-Gp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~L 382 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERIL-GPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQL 382 (415)
T ss_pred ccceecccCCcHHHHHHHHHhh-CCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHH
Confidence 9999998876222 111111 11110 0010000000 0112333458
Q ss_pred HHHHHhhhccCcCCCCCHHHHHH
Q psy5603 425 SIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 425 ~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
.+|+.+||..||.+|+|+.|++.
T Consensus 383 fDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 383 FDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred HHHHHHHHccCccccccHHHHhc
Confidence 88999999999999999999875
No 388
>cd08308 Death_Tube Death domain of Tube. Death domains (DDs) similar to the DD in the protein Tube from Drosophila melanogaster. In Drosophila, interaction between the DDs of Tube and Pelle is an important component of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and also in mediating innate immune response to pathogens. Tube and Pelle transmit the signal from the Toll receptor to the Dorsal/Cactus complex. Some members of this subfamily contain a C-terminal kinase domain, like Pelle, in addition to the DD. Tube has no counterpart in vertebrates. It contains an N-terminal DD and a C-terminal region with five copies of the Tube repeat, an 8-amino acid motif. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (D
Probab=99.98 E-value=8.2e-33 Score=225.03 Aligned_cols=116 Identities=45% Similarity=0.727 Sum_probs=106.8
Q ss_pred CceeeecCHHHHHHhhhhcCCcchHHHHHHhhhcCCCC-CCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCC
Q psy5603 10 DIEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDP-LKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRR 88 (455)
Q Consensus 10 ~~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~i~~~~~~-~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~ 88 (455)
+||||+||++++++||++||++++|++||+.|++++|+ ++.+||++.|++.||++++| +|+|||++||++|||+|+.
T Consensus 1 ~TeIR~Lp~~~~~~L~~iLD~~d~Wk~L~~~Ip~~~~~~~~~~~Y~~~hv~~ie~~~~~--~grSpte~LL~eWGT~g~~ 78 (125)
T cd08308 1 DTEIRKLPPADLYRLVNILDINDGWKKLMAIIPSDDDDFNNLAKYNAEHFKLIEQAANK--QRRSCSEILLDEWGTSGKV 78 (125)
T ss_pred CcchhcCCHHHHHHHHHHcCccccHHHHHHhcCCcccccccccccCHHHHHHHHHHHHh--cCCChHHHHHHHHhhcCCC
Confidence 59999999999999999999999999999999999886 78899999999999999987 8999999999999999888
Q ss_pred CCCHHHHHHHHHhccccccccccccccccC--CCCCCCCch
Q psy5603 89 RPRLSDLIMFLKKAELHQAARYVEVDVLKK--PESPGDNTE 127 (455)
Q Consensus 89 ~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~--~~~~~~~~~ 127 (455)
+|||++|+++|.+++|++||+++.++.++. |..|..+++
T Consensus 79 r~Tv~~L~~LL~k~~L~~Aa~~la~d~l~~~~~~rp~~gp~ 119 (125)
T cd08308 79 RPTLGVLLQLLVKAELFRAADYVAVDILKEEPPARPVVGPA 119 (125)
T ss_pred CCcHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCCCCCCCcc
Confidence 899999999999999999999999999876 444444443
No 389
>KOG0695|consensus
Probab=99.98 E-value=4.2e-32 Score=253.05 Aligned_cols=237 Identities=24% Similarity=0.340 Sum_probs=189.2
Q ss_pred CCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-
Q psy5603 174 RGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN- 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~- 250 (455)
+...||+|+|..|-+++++ +.+.||+|++++........ +.-.+.|-.+..+- +||.+|-+..++..
T Consensus 254 ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndded----------idwvqtek~vfe~asn~pflvglhscfqte 323 (593)
T KOG0695|consen 254 LLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDED----------IDWVQTEKHVFEQASNNPFLVGLHSCFQTE 323 (593)
T ss_pred eeeeecCcchhhhhheehcccceeeehhhHHHHhcCCccc----------chhHHhhHHHHHhccCCCeEEehhhhhccc
Confidence 4489999999999999976 46789999998765422221 22255666666554 79999999998877
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++|.||++||+|.-.++++. .++++.+..+...|..||.|||+ +|||+||||.+|+|+|..|++||.|+|++
T Consensus 324 srlffvieyv~ggdlmfhmqrqr---klpeeharfys~ei~lal~flh~--rgiiyrdlkldnvlldaeghikltdygmc 398 (593)
T KOG0695|consen 324 SRLFFVIEYVNGGDLMFHMQRQR---KLPEEHARFYSAEICLALNFLHE--RGIIYRDLKLDNVLLDAEGHIKLTDYGMC 398 (593)
T ss_pred ceEEEEEEEecCcceeeehhhhh---cCcHHHhhhhhHHHHHHHHHHhh--cCeeeeeccccceEEccCCceeecccchh
Confidence 88899999999999988888754 49999999999999999999999 89999999999999999999999999999
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCc--------chhhHHHhhhcc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNN--------TILYYYLVVEQE 401 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~--------~~~~~~~~~~~~ 401 (455)
+..-... ..+++++||+.|+|||++.| .+...+|+|++||+++||+.|+.||+-.. ......++.+..
T Consensus 399 ke~l~~g---d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq 475 (593)
T KOG0695|consen 399 KEGLGPG---DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ 475 (593)
T ss_pred hcCCCCC---cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc
Confidence 8654332 33678999999999998877 58899999999999999999999997321 233344444455
Q ss_pred cchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC
Q psy5603 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
..++..+.-+ ...+++.-+++||+.|.
T Consensus 476 iriprslsvk------------as~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 IRIPRSLSVK------------ASHVLKGFLNKDPKERL 502 (593)
T ss_pred ccccceeehh------------hHHHHHHhhcCCcHHhc
Confidence 5555444433 33447788889999884
No 390
>KOG0608|consensus
Probab=99.98 E-value=2e-32 Score=272.71 Aligned_cols=207 Identities=24% Similarity=0.336 Sum_probs=167.9
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
..+.||-|+||.|.++...+ ...||.|.+++....... .......|-.||..-..+-||+||-.+.+ +
T Consensus 633 kik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rn----------QvaHVKAERDILAEADn~WVVrLyySFQDkd 702 (1034)
T KOG0608|consen 633 KIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRN----------QVAHVKAERDILAEADNEWVVRLYYSFQDKD 702 (1034)
T ss_pred EEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhh----------hhhhhhhhhhhHhhcCCcceEEEEEEeccCC
Confidence 34789999999999998543 567899999865432211 13346778999999999999999988877 8
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.+|+||+|++||++..+|-+ .+.+++..+..++.++..|+++.|. .|+|||||||+|||||.+|++||.|||||.
T Consensus 703 nLYFVMdYIPGGDmMSLLIr---mgIFeE~LARFYIAEltcAiesVHk--mGFIHRDiKPDNILIDrdGHIKLTDFGLCT 777 (1034)
T KOG0608|consen 703 NLYFVMDYIPGGDMMSLLIR---MGIFEEDLARFYIAELTCAIESVHK--MGFIHRDIKPDNILIDRDGHIKLTDFGLCT 777 (1034)
T ss_pred ceEEEEeccCCccHHHHHHH---hccCHHHHHHHHHHHHHHHHHHHHh--ccceecccCccceEEccCCceeeeeccccc
Confidence 99999999999999999987 4469999999999999999999999 789999999999999999999999999984
Q ss_pred cccc---------CCcc------------------------------eeeeccCCCCCCCCCcccc-cCCCCcccchHHH
Q psy5603 332 MSET---------SNMK------------------------------TMYTENLTGTRPYMPPEAM-HCQISTKTDVFSY 371 (455)
Q Consensus 332 ~~~~---------~~~~------------------------------~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~Sl 371 (455)
-+.- .... ....-..+||+.|+|||++ ..+++...|+||.
T Consensus 778 GfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 778 GFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSV 857 (1034)
T ss_pred cceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHh
Confidence 2211 0000 0001124799999999965 5678999999999
Q ss_pred HHHHHHHHcCCCCCCCCcchhhHH
Q psy5603 372 GVILLELLTGMKPIDDNNTILYYY 395 (455)
Q Consensus 372 Gvvl~elltG~~p~~~~~~~~~~~ 395 (455)
|||||||+.|++||-........+
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~ 881 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQY 881 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCccee
Confidence 999999999999998877544333
No 391
>KOG1027|consensus
Probab=99.97 E-value=9.4e-33 Score=283.62 Aligned_cols=241 Identities=24% Similarity=0.322 Sum_probs=183.6
Q ss_pred CccCcCCCeE-EEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-CccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGT-VYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~-Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~-~~ 252 (455)
+.+|.|+-|+ ||+|... |+.||||++-... .....+|+..|... +|||||++++.-.+ ++
T Consensus 515 eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~e~----------------~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF 577 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYE-GREVAVKRLLEEF----------------FDFAQREIQLLQESDEHPNVIRYYCSEQDRQF 577 (903)
T ss_pred HHcccCCCCcEEEEEeeC-CceehHHHHhhHh----------------HHHHHHHHHHHHhccCCCceEEEEeeccCCce
Confidence 6789998887 6999997 7999999984221 23467899999888 69999999998777 88
Q ss_pred eEEEEEeccCCCHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-----CCceEEee
Q psy5603 253 NCIVYEYMCNGSLYDRLARV-NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-----NFVPKLGD 326 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-----~~~~kl~D 326 (455)
.|+..|.| ..||.+++... ...........+.+..|++.||++||+ -+||||||||.||||+. ...++|+|
T Consensus 578 ~YIalELC-~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHs--l~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 578 LYIALELC-ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHS--LKIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EEEEehHh-hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHh--cccccccCCCceEEEEccCCCcceeEEecc
Confidence 89999988 79999999874 111111214457789999999999999 67999999999999975 25899999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccch
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPV 404 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~ 404 (455)
||+++........-...+...||.+|+|||++.. .-+.++||||+|||+|+.++ |.+||.+.-... ..+......+
T Consensus 655 fglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L 732 (903)
T KOG1027|consen 655 FGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTL 732 (903)
T ss_pred cccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccce
Confidence 9999987765533334577899999999997755 44668999999999999999 599998653211 1111111111
Q ss_pred hhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 REVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..+ . +..++ +..+||.+|++.+|..||++.+|+.
T Consensus 733 ~~L-----~--~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 733 VHL-----E--PLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred eee-----c--cCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 111 0 11111 6889999999999999999999964
No 392
>KOG0984|consensus
Probab=99.97 E-value=8e-32 Score=236.22 Aligned_cols=197 Identities=27% Similarity=0.358 Sum_probs=160.1
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccccc-Cce
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCN-NIM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~-~~~ 252 (455)
..||+|++|.|-+-++. +|+..|+|.++..... . ..++..+|+.+..++ .+|.+|.+||... +..
T Consensus 52 ~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-----q-------~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd 119 (282)
T KOG0984|consen 52 EELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-----Q-------EQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD 119 (282)
T ss_pred hhhcCCccchhhheeeccCCeEEEEeeehhhcCh-----H-------HHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence 67999999999887765 5899999999755431 1 145578899998877 6899999999554 488
Q ss_pred eEEEEEeccCCCHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLAR-VNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.++.||.| .-||..+... ...+..+++...-+|+..+..||.|||+. ..+||||+||+|||++.+|.+||||||++-
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-LSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-hhhhhccCCcceEEEccCCcEEEcccccce
Confidence 99999999 4677655432 12256789999999999999999999984 469999999999999999999999999987
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccccC-----CCCcccchHHHHHHHHHHHcCCCCCCCCcc
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMHC-----QISTKTDVFSYGVILLELLTGMKPIDDNNT 390 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~sDv~SlGvvl~elltG~~p~~~~~~ 390 (455)
...++-.. +.-.|-..|||||.+.. +|+.+|||||||+++.||.+++.||+....
T Consensus 198 ~L~dSiAk----t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 198 YLVDSIAK----TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred eehhhhHH----HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 76554322 22367889999997643 478899999999999999999999998764
No 393
>KOG0576|consensus
Probab=99.97 E-value=9.5e-32 Score=269.92 Aligned_cols=253 Identities=25% Similarity=0.350 Sum_probs=202.5
Q ss_pred CCCCCCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeec
Q psy5603 167 NRKPYPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLL 245 (455)
Q Consensus 167 ~~~~~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~ 245 (455)
+..+.|+...++|.|++|.|||++++ .+...|||+++-... ++ ....++|+-+++.|+||||+.++
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~------dd-------~~~iqqei~~~~dc~h~nivay~ 78 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG------DD-------FSGIQQEIGMLRDCRHPNIVAYF 78 (829)
T ss_pred CCccchhheeeecCCcccchhhhcccccCchhhheeeeccCC------cc-------ccccccceeeeecCCCcChHHHH
Confidence 45566778899999999999999987 488999999976543 21 33367899999999999999999
Q ss_pred ccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEE
Q psy5603 246 GLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKL 324 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl 324 (455)
|.+.. ...+++||||.||||.+.-+- ..++++.++..+++..+.|++|||+ .|-+|||||-+|||+++.|.+|+
T Consensus 79 gsylr~dklwicMEycgggslQdiy~~---TgplselqiayvcRetl~gl~ylhs--~gk~hRdiKGanilltd~gDvkl 153 (829)
T KOG0576|consen 79 GSYLRRDKLWICMEYCGGGSLQDIYHV---TGPLSELQIAYVCRETLQGLKYLHS--QGKIHRDIKGANILLTDEGDVKL 153 (829)
T ss_pred hhhhhhcCcEEEEEecCCCcccceeee---cccchhHHHHHHHhhhhccchhhhc--CCcccccccccceeecccCceee
Confidence 96655 888999999999999998765 6789999999999999999999999 78999999999999999999999
Q ss_pred eecccccccccCCcceeeeccCCCCCCCCCcccc----cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhc
Q psy5603 325 GDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM----HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQ 400 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~----~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~ 400 (455)
.|||.+-.....- .....+.||+.|||||+- .|++...+|+|++|+...|+---++|.....+....+..-..
T Consensus 154 aDfgvsaqitati---~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS 230 (829)
T KOG0576|consen 154 ADFGVSAQITATI---AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKS 230 (829)
T ss_pred cccCchhhhhhhh---hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhcc
Confidence 9999865443221 223467999999999954 567899999999999999999999887655433222222111
Q ss_pred ccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.. ..+..+...+.+|++.++..+|++||+++.++.
T Consensus 231 ~~qpp~l-------kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 231 GFQPPTL-------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCCcc-------cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1111122 223456677999999999999999999987653
No 394
>KOG1024|consensus
Probab=99.97 E-value=8.8e-31 Score=248.69 Aligned_cols=254 Identities=25% Similarity=0.342 Sum_probs=203.3
Q ss_pred cCCCccCcCCCeEEEEEEEcC------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLG 246 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 246 (455)
+....+-+|.||.||+|.|.+ .+.|-||.++..+ .++....+.+|--.+..+.|||++++.+
T Consensus 287 ~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A------------S~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 287 RLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA------------SQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred echhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc------------cHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 445789999999999996642 3557788876433 2344677899999999999999999999
Q ss_pred cccC--ceeEEEEEeccCCCHHHHHhhc-----CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC
Q psy5603 247 LCNN--IMNCIVYEYMCNGSLYDRLARV-----NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN 319 (455)
Q Consensus 247 ~~~~--~~~~lV~e~~~~gsL~~~l~~~-----~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~ 319 (455)
.+.+ ..++.+|.++.-|+|..+|.-. .....++-.+...++.|++.|+.|||+ +++||.||-..|.++|+.
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~--~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN--HGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh--cCcccchhhhhcceehhh
Confidence 7755 7788999999999999999722 223457778899999999999999999 889999999999999999
Q ss_pred CceEEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHh
Q psy5603 320 FVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLV 397 (455)
Q Consensus 320 ~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~ 397 (455)
..+||+|=.++|..-..+. ......-.....||+||.+ ...++.++|+|||||++|||+| |+.||.+.++.++....
T Consensus 433 LqVkltDsaLSRDLFP~DY-hcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl 511 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDY-HCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL 511 (563)
T ss_pred eeEEeccchhccccCcccc-cccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH
Confidence 9999999999886544332 1112222335579999966 5578999999999999999999 99999998877665544
Q ss_pred hhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhh
Q psy5603 398 VEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKS 452 (455)
Q Consensus 398 ~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~ 452 (455)
..+ .+.-.+..++..+..++++||...|++||+.+|+..-|.+.
T Consensus 512 kdG-----------yRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 512 KDG-----------YRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred hcc-----------ceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 322 12233456777888899999999999999999999888764
No 395
>KOG1152|consensus
Probab=99.97 E-value=3.6e-31 Score=261.89 Aligned_cols=200 Identities=25% Similarity=0.390 Sum_probs=167.9
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC---ccceeeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK---HVNLLRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 248 (455)
...+.+|+|+||.|++|.++. ...|+||.+.+.....+....+.. .-..-.|++||..++ |+||+++++++
T Consensus 564 ttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrk-----LGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 564 TTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRK-----LGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred eeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccc-----cCccchhHHHHHHhhhcCccchhhhhhee
Confidence 455889999999999999874 678999999876654433332221 122456999999997 99999999999
Q ss_pred cC-ceeEEEEEecc-CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 249 NN-IMNCIVYEYMC-NGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 249 ~~-~~~~lV~e~~~-~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
.+ +.+||++|-.. |-+|++++.. .+.+++..+..|+.|++.|+++||+ .||||||||-+||.++.+|.+||+|
T Consensus 639 Eddd~yyl~te~hg~gIDLFd~IE~---kp~m~E~eAk~IFkQV~agi~hlh~--~~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 639 EDDDYYYLETEVHGEGIDLFDFIEF---KPRMDEPEAKLIFKQVVAGIKHLHD--QGIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred ecCCeeEEEecCCCCCcchhhhhhc---cCccchHHHHHHHHHHHhccccccc--cCceecccccccEEEecCCeEEEee
Confidence 88 78889998764 4589999987 5679999999999999999999999 8899999999999999999999999
Q ss_pred cccccccccCCcceeeeccCCCCCCCCCcccccCC--CCcccchHHHHHHHHHHHcCCCCCCC
Q psy5603 327 FGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--ISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~sDv~SlGvvl~elltG~~p~~~ 387 (455)
||.+....... ...++||..|.|||++.|. ....-|||++|++||.+.....||.+
T Consensus 714 fgsaa~~ksgp-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 714 FGSAAYTKSGP-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred ccchhhhcCCC-----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 99987765443 3457999999999999875 36688999999999999999999864
No 396
>KOG0664|consensus
Probab=99.97 E-value=9.8e-32 Score=244.51 Aligned_cols=253 Identities=23% Similarity=0.338 Sum_probs=186.2
Q ss_pred CccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC----
Q psy5603 176 NKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN---- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---- 250 (455)
+-||-|+||.||-+++. +|+.||+|++..-. ......+.+.+|++.|..++|.|++..++...-
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-----------q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~d 127 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-----------QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPS 127 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHH-----------HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCch
Confidence 78999999999999875 69999999985322 122335678899999999999999998886533
Q ss_pred --ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q psy5603 251 --IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFG 328 (455)
.+.|.|.|.| ..+|...+-. ..+++.+.+.-++.||++||.|||+ .+|.||||||.|+|++.|..+||||||
T Consensus 128 fFqEiYV~TELm-QSDLHKIIVS---PQ~Ls~DHvKVFlYQILRGLKYLHs--A~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 128 FFQELYVLTELM-QSDLHKIIVS---PQALTPDHVKVFVYQILRGLKYLHT--ANILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred HHHHHHHHHHHH-Hhhhhheecc---CCCCCcchhhhhHHHHHhhhHHHhh--cchhhccCCCccEEeccCceEEecccc
Confidence 3457778888 4567666654 4579999999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--cccch
Q psy5603 329 IVKMSETSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE--QEVPV 404 (455)
Q Consensus 329 la~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~--~~~~~ 404 (455)
++|......... ++ .-+-|..|.|||++.| .++.++||||.||++.|++..+..|...+.......+.. +....
T Consensus 202 LARvee~d~~~h-MT-qEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~ 279 (449)
T KOG0664|consen 202 LARTWDQRDRLN-MT-HEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ 279 (449)
T ss_pred cccccchhhhhh-hH-HHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence 999776554322 22 2245788999997755 589999999999999999999999987764332222211 11111
Q ss_pred h-----------hccchhc---------cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 405 R-----------EVLDKEA---------GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 405 ~-----------~~~d~~~---------~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+ .++.... ....+.........++.+++..||++|.+.++.+.
T Consensus 280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~ 342 (449)
T KOG0664|consen 280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQ 342 (449)
T ss_pred HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcc
Confidence 0 1111000 11111223334455677899999999999887754
No 397
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.6e-29 Score=227.24 Aligned_cols=209 Identities=36% Similarity=0.558 Sum_probs=177.8
Q ss_pred cCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEE
Q psy5603 178 LGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCI 255 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~l 255 (455)
||+|++|.||++...+ ++.+++|++....... ....+.+|++.++.+.|++++++++++.. ...++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~------------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~ 68 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS------------LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYL 68 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh------------HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEE
Confidence 6999999999999864 7899999987543211 13568999999999999999999998877 78899
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-CCceEEeecccccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKLGDFGIVKMSE 334 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl~DFGla~~~~ 334 (455)
++|++.+++|.+++.... ..+++..+..++.++++++.+||+ .+++|+||+|.||+++. ++.++|+|||.+....
T Consensus 69 ~~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~--~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~ 144 (215)
T cd00180 69 VMEYCEGGSLKDLLKENE--GKLSEDEILRILLQILEGLEYLHS--NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLT 144 (215)
T ss_pred EEecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHhhEEEeCCCCcEEEecCCceEEcc
Confidence 999999999999988642 368999999999999999999999 78999999999999999 8999999999987655
Q ss_pred cCCcceeeeccCCCCCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhc
Q psy5603 335 TSNMKTMYTENLTGTRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEA 412 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 412 (455)
.... ......+...|++||.+.. ..+.++|+||+|++++++
T Consensus 145 ~~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------- 187 (215)
T cd00180 145 SDKS---LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------- 187 (215)
T ss_pred CCcc---hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH----------------------------------
Confidence 4321 1233567888999997755 567899999999999999
Q ss_pred cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 413 GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 413 ~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
..+.+++..|+..+|++||++.++++.
T Consensus 188 ---------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 236778999999999999999999864
No 398
>cd08793 Death_IRAK4 Death domain of Interleukin-1 Receptor-Associated Kinase 4. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase 4 (IRAK4). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB, and mitogen-activated protein kinases. IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK4 is an active kinase that is also involved in T-cell receptor signaling pathways, implying that it may function in acquired immunity and not just in innate immunity. It is known as the master IRAK member because its absence strongly impairs TLR- and IL-1-mediated signaling and innate immune defenses, while the absence of other IRAK proteins only shows slight effects. IRAK4-deficient patients have impaired inflammatory responses and recurrent life-threatening infections. DDs are protein-protein int
Probab=99.96 E-value=2.9e-30 Score=201.46 Aligned_cols=98 Identities=23% Similarity=0.359 Sum_probs=93.4
Q ss_pred ceeeecCHHHHHHhhhhcCCcchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCC
Q psy5603 11 IEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRP 90 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~ 90 (455)
||||.||++++++||++|||+++|+++|+.|++++| +++|++.|||.||++++ +|+|||++||++||++ |+
T Consensus 1 t~ir~L~~~vrkkL~~~LDp~~~W~~LA~~i~~~~~---~~~y~~~ei~~ie~~~~---~g~SPT~~LL~dWgt~---N~ 71 (100)
T cd08793 1 TYVRNLNYGLLRQLSDFLDPQEGWKKIAVAIKKPSG---DPRYSQFHIRRFEALVQ---QGKSPTCELLFDWGTT---NC 71 (100)
T ss_pred ChHHHcCHHHHHHHHHHhCCcccHHHHHHHHhcccC---CCCCCHHHHHHHHHHHH---cCCChHHHHHHHHccC---CC
Confidence 799999999999999999999999999999999988 89999999999999988 5999999999999997 99
Q ss_pred CHHHHHHHHHhcccccccccccccccc
Q psy5603 91 RLSDLIMFLKKAELHQAARYVEVDVLK 117 (455)
Q Consensus 91 ~~~~l~~~l~~~~l~~~~~~~~~~~~~ 117 (455)
||++|+++|.+.++++||+++.|++.+
T Consensus 72 TV~~L~~lL~k~~l~~am~~l~p~~~~ 98 (100)
T cd08793 72 TVGDLVDLLIQNEFFAPASLLLPDAVP 98 (100)
T ss_pred cHHHHHHHHHHcccHHHHHHHCCCccc
Confidence 999999999999999999999887653
No 399
>KOG0670|consensus
Probab=99.96 E-value=6.3e-30 Score=250.24 Aligned_cols=254 Identities=23% Similarity=0.307 Sum_probs=194.6
Q ss_pred CcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc------cceeee
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH------VNLLRL 244 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l 244 (455)
|++....|+|-||+|.+|.+.. |..||||+++.... --+.=+.|++||++|.. -|++++
T Consensus 434 Y~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~--------------M~KtGl~EleiLkKL~~AD~Edk~Hclrl 499 (752)
T KOG0670|consen 434 YEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV--------------MHKTGLKELEILKKLNDADPEDKFHCLRL 499 (752)
T ss_pred eEEEeccccceeeeeeeccccCCCCeeEEEEeecchH--------------HhhhhhHHHHHHHHhhccCchhhhHHHHH
Confidence 4566778999999999999864 78999999975321 02224679999999953 388888
Q ss_pred cccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC-Cce
Q psy5603 245 LGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVP 322 (455)
Q Consensus 245 ~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~-~~~ 322 (455)
+..|.. .++|||+|-+ ..+|.+.|...+....|....+..++.|+..||..|-. -||+|.||||+|||+++. ..+
T Consensus 500 ~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~--c~vlHaDIKPDNiLVNE~k~iL 576 (752)
T KOG0670|consen 500 FRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK--CGVLHADIKPDNILVNESKNIL 576 (752)
T ss_pred HHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh--cCeeecccCccceEeccCccee
Confidence 886655 9999999988 68999999998888889999999999999999999999 679999999999999864 689
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh--
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-- 399 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-- 399 (455)
||||||.|.+...+...+. .-+.-|.|||++.| .|+...|+||.||+||||.||+..|.+.....+......
T Consensus 577 KLCDfGSA~~~~eneitPY-----LVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K 651 (752)
T KOG0670|consen 577 KLCDFGSASFASENEITPY-----LVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK 651 (752)
T ss_pred eeccCccccccccccccHH-----HHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence 9999999988877664332 33456999996655 689999999999999999999999988763322222111
Q ss_pred cccc-----------------------------------hhhccch------hc-c--CCC--hhHHHHHHHHHHHhhhc
Q psy5603 400 QEVP-----------------------------------VREVLDK------EA-G--EWN--ETHVETLISIVFEKCCV 433 (455)
Q Consensus 400 ~~~~-----------------------------------~~~~~d~------~~-~--~~~--~~~~~~~l~~Li~~~l~ 433 (455)
+..+ +..++.+ .+ + ..+ .......+.+|+.+|+.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 1111 0001111 00 0 011 23455678899999999
Q ss_pred cCcCCCCCHHHHHH
Q psy5603 434 FEKDKRASMRDIVD 447 (455)
Q Consensus 434 ~dp~~RPs~~evl~ 447 (455)
.||.+|.+..+.+.
T Consensus 732 LdP~KRit~nqAL~ 745 (752)
T KOG0670|consen 732 LDPEKRITVNQALK 745 (752)
T ss_pred cChhhcCCHHHHhc
Confidence 99999999998864
No 400
>KOG0668|consensus
Probab=99.96 E-value=4.1e-29 Score=222.31 Aligned_cols=258 Identities=19% Similarity=0.305 Sum_probs=193.0
Q ss_pred HhcCCCCCCCCcCCCccCcCCCeEEEEEEE-cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-cc
Q psy5603 162 ATDGFNRKPYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HV 239 (455)
Q Consensus 162 ~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ 239 (455)
.+-.|....-|++.+++|+|-++.||.|.. .++..++||++++- ..+.+.+|+.||..++ ||
T Consensus 30 ~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV----------------kkkKIkREikIL~nL~gg~ 93 (338)
T KOG0668|consen 30 LVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV----------------KKKKIKREIKILQNLRGGP 93 (338)
T ss_pred eeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH----------------HHHHHHHHHHHHHhccCCC
Confidence 455566666778889999999999999984 35789999999742 1455889999999997 99
Q ss_pred ceeeecccccC---ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE
Q psy5603 240 NLLRLLGLCNN---IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 240 niv~l~~~~~~---~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl 316 (455)
||+++++...+ ..+.||+||..+.+...+.. .++.-.+..++.+++.||.|+|+ .||+|||+||.|+++
T Consensus 94 NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~------tl~d~dIryY~~elLkALdyCHS--~GImHRDVKPhNvmI 165 (338)
T KOG0668|consen 94 NIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP------TLTDYDIRYYIYELLKALDYCHS--MGIMHRDVKPHNVMI 165 (338)
T ss_pred CeeehhhhhcCccccCchhHhhhhccccHHHHhh------hhchhhHHHHHHHHHHHHhHHHh--cCcccccCCcceeee
Confidence 99999998766 56789999999888877654 37888899999999999999999 889999999999999
Q ss_pred cC-CCceEEeecccccccccCCcceeeeccCCCCCCCCCccccc--CCCCcccchHHHHHHHHHHHcCCCCCCCCcc--h
Q psy5603 317 DE-NFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH--CQISTKTDVFSYGVILLELLTGMKPIDDNNT--I 391 (455)
Q Consensus 317 ~~-~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~sDv~SlGvvl~elltG~~p~~~~~~--~ 391 (455)
|. .-.++|+|+|+|.+....... +..+.+..|.-||++- ..++...|+|||||+|..|+..+-||..... +
T Consensus 166 dh~~rkLrlIDWGLAEFYHp~~eY----nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D 241 (338)
T KOG0668|consen 166 DHELRKLRLIDWGLAEFYHPGKEY----NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 241 (338)
T ss_pred chhhceeeeeecchHhhcCCCcee----eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence 95 458999999999987655422 2335667788999663 3578899999999999999999999865431 1
Q ss_pred -hhHHHhhhcc---------------cchhhccchhc-cCC-------ChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 392 -LYYYLVVEQE---------------VPVREVLDKEA-GEW-------NETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 392 -~~~~~~~~~~---------------~~~~~~~d~~~-~~~-------~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.......+. ..+..++.... ..| ....+....-+|+.+.+..|-.+|+|++|.+.
T Consensus 242 QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 242 QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 1111100010 01111111111 111 11233356778999999999999999999764
No 401
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1e-27 Score=222.71 Aligned_cols=197 Identities=35% Similarity=0.532 Sum_probs=165.7
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
.+.+.||+|++|.||+|...+ ++.+|+|.+...... .....+.+|++.+.+++|+|++++++++..
T Consensus 2 ~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~ 69 (225)
T smart00221 2 ELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE------------KQREEFLREIRILKKLKHPNIVKLYGVFEDP 69 (225)
T ss_pred ceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch------------HHHHHHHHHHHHHHhCCCCChhhheeeeecC
Confidence 345889999999999999875 789999998754321 014568899999999999999999998776
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
...++++||+.+++|.+++..... .+++..+..++.+++.++.+||+ .+++|+||+|.||+++.++.++|+|||++
T Consensus 70 ~~~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~--~~i~h~di~~~ni~v~~~~~~~l~d~g~~ 145 (225)
T smart00221 70 EPLYLVMEYCEGGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHS--LGIVHRDLKPENILLGMDGLVKLADFGLA 145 (225)
T ss_pred CceEEEEeccCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHh--CCeecCCCCHHHEEEcCCCCEEEeeCcee
Confidence 788999999999999999986332 28899999999999999999999 78999999999999999999999999998
Q ss_pred cccccCCcceeeeccCCCCCCCCCcccc-c-CCCCcccchHHHHHHHHHHHcCCCCCCC
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYMPPEAM-H-CQISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~-~~~~~~sDv~SlGvvl~elltG~~p~~~ 387 (455)
........ .......++..|++||.+ . ..++.++|+||||++++||++|+.||..
T Consensus 146 ~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 146 RFIHRDLA--ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred eEecCccc--ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 87654320 012345678889999976 2 3467799999999999999999999976
No 402
>KOG0665|consensus
Probab=99.96 E-value=6.5e-29 Score=231.04 Aligned_cols=253 Identities=23% Similarity=0.285 Sum_probs=187.8
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
+|.-...+|.|.- .|--+.+. .+++||+|++....... ...++..+|...+..+.|+||++++.++.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~-----------~~akra~rel~l~~~v~~~nii~l~n~ft 85 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQ-----------THAKRAYRELKLMKCVNHKNIISLLNVFT 85 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccC-----------ccchhhhhhhhhhhhhcccceeeeeeccC
Confidence 3334477899988 56666543 47999999986542211 11455789999999999999999999763
Q ss_pred C-------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCce
Q psy5603 250 N-------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVP 322 (455)
Q Consensus 250 ~-------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~ 322 (455)
- ...|+|||+| .++|.+.+.. .++-..+..|..|++.|++|||+ .+|+||||||+||++..+..+
T Consensus 86 P~~~l~~~~e~y~v~e~m-~~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lhs--~~IihRdLkPsnivv~~~~~l 157 (369)
T KOG0665|consen 86 PQKTLEEFQEVYLVMELM-DANLCQVILM-----ELDHETISYILYQMLCGIKHLHS--AGIIHRDLKPSNIVVNSDCTL 157 (369)
T ss_pred ccccHHHHHhHHHHHHhh-hhHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHHh--cceeecccCcccceecchhhe
Confidence 2 3558999999 6889888773 36778899999999999999999 789999999999999999999
Q ss_pred EEeecccccccccCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhh-c
Q psy5603 323 KLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVE-Q 400 (455)
Q Consensus 323 kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~-~ 400 (455)
||.|||+|+..... ...+..+.|..|.|||++ ..++.+.+||||+||++.||++|..-|.+.+...-+.++.. -
T Consensus 158 Ki~dfg~ar~e~~~----~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 158 KILDFGLARTEDTD----FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQL 233 (369)
T ss_pred eeccchhhcccCcc----cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHh
Confidence 99999999865433 223456889999999965 44688899999999999999999999987764333333222 1
Q ss_pred ccc--------------------------hhhccchhc---cCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 401 EVP--------------------------VREVLDKEA---GEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 401 ~~~--------------------------~~~~~d~~~---~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
+.+ +.+.+.... ....+..-....++|+.+||-.+|++|.+++++++
T Consensus 234 gtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 234 GTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred cCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 111 011110000 00001123456888999999999999999999875
No 403
>KOG1345|consensus
Probab=99.95 E-value=1.8e-28 Score=223.28 Aligned_cols=241 Identities=20% Similarity=0.328 Sum_probs=177.2
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecc-cccC
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG-LCNN 250 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~-~~~~ 250 (455)
+.+.||+|.||.+-+++++. .+.+++|.+.... .....|.+|...--.+ .|.||+..|+ .+..
T Consensus 28 I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~--------------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt 93 (378)
T KOG1345|consen 28 INKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ--------------TTQADFVREFHYSFFLSPHQHIIDTYEVAFQT 93 (378)
T ss_pred HHHHhcccceeeEEeeeccCCceEEEeeccCcch--------------hhHHHHHHHhccceeeccchhhhHHHHHHhhc
Confidence 44899999999999999884 6789999986432 2256699999876666 6899999998 4555
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc--CCCceEEeec
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD--ENFVPKLGDF 327 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~--~~~~~kl~DF 327 (455)
+.+.+++||++.|+|..-+.. ..+-+.....++.|++.||.|+|+ +++||||||.+|||+- +...+|||||
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHs--knlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHS--KNLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred CceEEEeeccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhc--cchhhcccccceEEEecCCccEEEeeec
Confidence 778899999999999887764 347888899999999999999999 9999999999999994 3458999999
Q ss_pred ccccccccCCcceeeeccCCCCCCCCCccccc----CC--CCcccchHHHHHHHHHHHcCCCCCCCCcch-hhHHH---h
Q psy5603 328 GIVKMSETSNMKTMYTENLTGTRPYMPPEAMH----CQ--ISTKTDVFSYGVILLELLTGMKPIDDNNTI-LYYYL---V 397 (455)
Q Consensus 328 Gla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~--~~~~sDv~SlGvvl~elltG~~p~~~~~~~-~~~~~---~ 397 (455)
|+.+..+... ...--+..|.|||... +. ..+.+|+|.|||++|.++||.+||...... ..+.. .
T Consensus 168 G~t~k~g~tV------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w 241 (378)
T KOG1345|consen 168 GLTRKVGTTV------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQW 241 (378)
T ss_pred ccccccCcee------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHH
Confidence 9987544321 1223456799999542 22 467899999999999999999999854311 11111 1
Q ss_pred hh-cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHH
Q psy5603 398 VE-QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLL 449 (455)
Q Consensus 398 ~~-~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L 449 (455)
.. ....+++.+ ..+ +.-+..++++-+..++++|-.+.++.+.-
T Consensus 242 ~~rk~~~~P~~F----~~f-----s~~a~r~Fkk~lt~~~~drcki~~~kk~r 285 (378)
T KOG1345|consen 242 LKRKNPALPKKF----NPF-----SEKALRLFKKSLTPRFKDRCKIWTAKKMR 285 (378)
T ss_pred hcccCccCchhh----ccc-----CHHHHHHHHHhcCCcccccchhHHHHHHH
Confidence 11 111122222 122 22245567788999999997777665544
No 404
>KOG1290|consensus
Probab=99.95 E-value=7.4e-27 Score=227.68 Aligned_cols=129 Identities=28% Similarity=0.332 Sum_probs=107.5
Q ss_pred CCcCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-----c---cce
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-----H---VNL 241 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----h---~ni 241 (455)
+|-+.++||-|-|++||++-+.. .+.||+|+.+...- -.+....||++|++++ | ..|
T Consensus 79 RY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh--------------YtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 79 RYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH--------------YTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred eEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH--------------HHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 56778999999999999998763 67899999974322 1344678999999874 2 379
Q ss_pred eeeccccc----C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEE
Q psy5603 242 LRLLGLCN----N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLL 316 (455)
Q Consensus 242 v~l~~~~~----~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl 316 (455)
|+|+++|. + .+.|+|+|++ |.+|..++..... ..++...+..|+.|++.||.|||+- -||||-||||+|||+
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~e-cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHRE-CGIIHTDLKPENVLL 221 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHh-cCccccCCCcceeee
Confidence 99999773 2 6789999999 8899999987553 5689999999999999999999985 479999999999999
No 405
>KOG1167|consensus
Probab=99.95 E-value=8.8e-28 Score=231.17 Aligned_cols=253 Identities=24% Similarity=0.281 Sum_probs=186.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcC----CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKN----GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~----~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
|...++||+|+|++||++++.+ .+.||+|.+..... -....+|++.|..+ .+.||+++.+
T Consensus 38 ~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~---------------p~ri~~El~~L~~~gG~~ni~~~~~ 102 (418)
T KOG1167|consen 38 YKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS---------------PSRILNELEMLYRLGGSDNIIKLNG 102 (418)
T ss_pred hhhhccccccchhhhhhhhHhhhccccceEeeeecccccC---------------chHHHHHHHHHHHhccchhhhcchh
Confidence 4555999999999999998643 57899999865432 23488999999999 5999999999
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-CCceEE
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-NFVPKL 324 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-~~~~kl 324 (455)
+... +..++|+||++...-.+++.. ++...+..++..++.||.++|. +|||||||||+|+|.+. .+.-.|
T Consensus 103 ~~rnnd~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h~--~GIvHRDiKpsNFL~n~~t~rg~L 174 (418)
T KOG1167|consen 103 CFRNNDQVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLHK--NGIVHRDIKPSNFLYNRRTQRGVL 174 (418)
T ss_pred hhccCCeeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhhc--cCccccCCCccccccccccCCceE
Confidence 8766 889999999999999998875 7789999999999999999999 89999999999999984 578899
Q ss_pred eecccccccccCC---------------------------------c--------ceeeeccCCCCCCCCCccccc--CC
Q psy5603 325 GDFGIVKMSETSN---------------------------------M--------KTMYTENLTGTRPYMPPEAMH--CQ 361 (455)
Q Consensus 325 ~DFGla~~~~~~~---------------------------------~--------~~~~~~~~~gt~~Y~aPE~~~--~~ 361 (455)
+|||+|....... . .........||++|.|||++. +.
T Consensus 175 vDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~ 254 (418)
T KOG1167|consen 175 VDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPR 254 (418)
T ss_pred EechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccC
Confidence 9999986110000 0 000011247999999999764 35
Q ss_pred CCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHH--------------hhh-cc------cc----------hhhccch
Q psy5603 362 ISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYL--------------VVE-QE------VP----------VREVLDK 410 (455)
Q Consensus 362 ~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~--------------~~~-~~------~~----------~~~~~d~ 410 (455)
-++++||||.|||++.+++++.||.....+..... ... +. .. +....-.
T Consensus 255 QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~ 334 (418)
T KOG1167|consen 255 QTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIE 334 (418)
T ss_pred cCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChh
Confidence 68899999999999999999999975431111000 000 00 00 0001000
Q ss_pred hcc---------CCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 411 EAG---------EWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 411 ~~~---------~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
... ....+..+..+.+|+.+|+..||.+|.++++.++
T Consensus 335 ~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 335 SIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred hcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 000 0112334457888999999999999999999864
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=5.7e-27 Score=257.83 Aligned_cols=197 Identities=17% Similarity=0.145 Sum_probs=134.6
Q ss_pred HhhCCc-cceeeecccc-------cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy5603 233 LSQCKH-VNLLRLLGLC-------NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 233 l~~l~h-~niv~l~~~~-------~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ 303 (455)
.+.++| +||+.+++++ .. ...++++||+ +++|.++|... ..++++.+++.++.||+.||.|||+ +|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~--~g 100 (793)
T PLN00181 26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHS--QG 100 (793)
T ss_pred cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHh--CC
Confidence 345556 5888888866 12 3446678877 77999999753 2469999999999999999999999 88
Q ss_pred eeecCCCCCcEEEcCC-------------------CceEEeecccccccccCCc-------------ceeeeccCCCCCC
Q psy5603 304 IIHRDVKSANVLLDEN-------------------FVPKLGDFGIVKMSETSNM-------------KTMYTENLTGTRP 351 (455)
Q Consensus 304 iiH~Dikp~NILl~~~-------------------~~~kl~DFGla~~~~~~~~-------------~~~~~~~~~gt~~ 351 (455)
|+||||||+||||+.. +.+||+|||+++....... .........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 9999999999999654 4455666666543211000 0000112468999
Q ss_pred CCCcccc-cCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHh
Q psy5603 352 YMPPEAM-HCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEK 430 (455)
Q Consensus 352 Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~ 430 (455)
|+|||++ ...++.++|||||||+||||++|.+|+.......... .... +.+.. .... ....+++.+
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~--~~~~------~~~~~----~~~~-~~~~~~~~~ 247 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSL--RHRV------LPPQI----LLNW-PKEASFCLW 247 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHH--HHhh------cChhh----hhcC-HHHHHHHHH
Confidence 9999965 4568999999999999999999998876432211110 0000 00100 0001 123456778
Q ss_pred hhccCcCCCCCHHHHHH
Q psy5603 431 CCVFEKDKRASMRDIVD 447 (455)
Q Consensus 431 ~l~~dp~~RPs~~evl~ 447 (455)
||..+|.+||++.|+++
T Consensus 248 ~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 248 LLHPEPSCRPSMSELLQ 264 (793)
T ss_pred hCCCChhhCcChHHHhh
Confidence 99999999999999975
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=1.2e-25 Score=201.91 Aligned_cols=166 Identities=22% Similarity=0.274 Sum_probs=124.5
Q ss_pred CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceee
Q psy5603 263 GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMY 342 (455)
Q Consensus 263 gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~ 342 (455)
|||.+++...+ .++++.+++.|+.|++.||.|||+ ++ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~--~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------ 62 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHR--QA------KSGNILLTWDGLLKL--DGSVAFKTPE------ 62 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh--cC------CcccEeEcCccceee--ccceEeeccc------
Confidence 78999997643 369999999999999999999999 55 999999999999999 9998765432
Q ss_pred eccCCCCCCCCCccccc-CCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHH-HhhhcccchhhccchhccCCChhHH
Q psy5603 343 TENLTGTRPYMPPEAMH-CQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYY-LVVEQEVPVREVLDKEAGEWNETHV 420 (455)
Q Consensus 343 ~~~~~gt~~Y~aPE~~~-~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~-~~~~~~~~~~~~~d~~~~~~~~~~~ 420 (455)
...||+.|+|||++. +.++.++|||||||++|||+||..||.......... ......... +.. .......+
T Consensus 63 --~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~ 135 (176)
T smart00750 63 --QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD----DPR-DRSNLESV 135 (176)
T ss_pred --cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccC----Ccc-ccccHHHH
Confidence 126899999999764 467889999999999999999999997654221111 111110000 000 00112233
Q ss_pred HH--HHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 421 ET--LISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 421 ~~--~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.. .+.+++.+|+..+|++||++.++++.+..+.
T Consensus 136 ~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 136 SAARSFADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 33 5889999999999999999999999876543
No 408
>cd08307 Death_Pelle Death domain of the protein kinase Pelle. Death domain (DD) of the protein kinase Pelle from Drosophila melanogaster and simlar proteins. In Drosophila, interaction between the DDs of Tube and Pelle is an important component of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and in mediating innate immune responses to pathogens. Tube and Pelle transmit the signal from the Toll receptor to the Dorsal/Cactus complex. Pelle also functions in photoreceptor axon targeting. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=99.93 E-value=2e-26 Score=181.44 Aligned_cols=88 Identities=22% Similarity=0.426 Sum_probs=84.0
Q ss_pred ceeeecCHHHHHHhhhhcCCcchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCC
Q psy5603 11 IEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRP 90 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~ 90 (455)
||||+||++++++||++||++++|++||+.|+ +|++.||+.||+++. +|+|||++||++||++ |+
T Consensus 1 ~yIr~Lp~~~~~~Lc~lLD~~~~W~~LA~~i~---------~ys~~~v~~i~~~~~---~g~SPt~eLL~~WG~~---n~ 65 (97)
T cd08307 1 MYIYDIPFTERKQLCALLDTDNVWEELAFVMM---------GYSNDDVEGIQRCCL---RGRSPTEELLDIWGNK---NH 65 (97)
T ss_pred CCcccCCHHHHHHHHHHhCCcCcHHHHHHHHh---------cCCHHHHHHHHHHHc---CCCChHHHHHHHHhhc---CC
Confidence 69999999999999999999999999999997 899999999999987 5999999999999998 99
Q ss_pred CHHHHHHHHHhcccccccccccc
Q psy5603 91 RLSDLIMFLKKAELHQAARYVEV 113 (455)
Q Consensus 91 ~~~~l~~~l~~~~l~~~~~~~~~ 113 (455)
||++|+++|.+.++++||+++.+
T Consensus 66 Tv~~L~~~L~k~kl~~Am~ilk~ 88 (97)
T cd08307 66 TITELFVLLYREKLFRAMRIIKD 88 (97)
T ss_pred CHHHHHHHHHHhchHHHHHHHHH
Confidence 99999999999999999998754
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=3.8e-25 Score=218.99 Aligned_cols=167 Identities=18% Similarity=0.133 Sum_probs=124.1
Q ss_pred CcCCCccCcCCCeEEEEEEEc--CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLK--NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN 249 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 249 (455)
|.+++.||+|+||+||+|.++ +++.||||++........ . ......|.+|++++++++|+|+++.+..
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~---~-----~~~~~~~~~E~~iL~~L~h~~iv~~l~~-- 89 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWS---K-----PLARHLAAREIRALKTVRGIGVVPQLLA-- 89 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccc---c-----HHHHHHHHHHHHHHHhccCCCCCcEEEE--
Confidence 345599999999999999875 467789998752211000 0 0114558999999999999999863322
Q ss_pred CceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCC-CCCcEEEcCCCceEEeecc
Q psy5603 250 NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV-KSANVLLDENFVPKLGDFG 328 (455)
Q Consensus 250 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Di-kp~NILl~~~~~~kl~DFG 328 (455)
.+..|+||||++|++|.. +.. .. ...++.+++.||.|||+ +||+|||| ||+|||++.++.+||+|||
T Consensus 90 ~~~~~LVmE~~~G~~L~~-~~~------~~---~~~~~~~i~~aL~~lH~--~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 90 TGKDGLVRGWTEGVPLHL-ARP------HG---DPAWFRSAHRALRDLHR--AGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred cCCcEEEEEccCCCCHHH-hCc------cc---hHHHHHHHHHHHHHHHH--CCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 245799999999999963 211 11 14678899999999999 89999999 9999999999999999999
Q ss_pred cccccccCCccee-----eeccCCCCCCCCCcccccC
Q psy5603 329 IVKMSETSNMKTM-----YTENLTGTRPYMPPEAMHC 360 (455)
Q Consensus 329 la~~~~~~~~~~~-----~~~~~~gt~~Y~aPE~~~~ 360 (455)
+|+.......... ......+++.|+|||.+..
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 9987654321111 1135678999999998753
No 410
>KOG1164|consensus
Probab=99.92 E-value=1.5e-23 Score=207.08 Aligned_cols=259 Identities=24% Similarity=0.281 Sum_probs=183.8
Q ss_pred CCcCCCccCcCCCeEEEEEEEcCC--cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc----cceeee
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKNG--MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH----VNLLRL 244 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~--~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l 244 (455)
.|.+.++||+|+||.||.|..... ..+|+|........... .+..|..++..+.. +++..+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-------------~l~~E~~vl~~l~~~~~~~~~~~~ 85 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-------------VLKIEIQVLKKLEKKNGPSHFPKL 85 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-------------cchhHHHHHHHHhhhcCCCCCCEE
Confidence 356779999999999999998653 47888887654321111 26678888887762 577777
Q ss_pred cccc-cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC---
Q psy5603 245 LGLC-NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN--- 319 (455)
Q Consensus 245 ~~~~-~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~--- 319 (455)
++.. .. ...++||+.+ |.||.++..... ...++..+++.|+.|++.+|++||+ .|++||||||+|++++..
T Consensus 86 ~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~--~G~iHRDiKp~N~~~g~~~~~ 161 (322)
T KOG1164|consen 86 LDHGRSTEDFNFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHS--KGFIHRDIKPENFVVGQSSRS 161 (322)
T ss_pred EEeccCCCceeEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHh--cCcccCCcCHHHeeecCCCCc
Confidence 7766 34 6789999988 999999876544 4579999999999999999999999 889999999999999865
Q ss_pred --CceEEeeccccc--ccccCCc---ceee--eccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCc
Q psy5603 320 --FVPKLGDFGIVK--MSETSNM---KTMY--TENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 320 --~~~kl~DFGla~--~~~~~~~---~~~~--~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~ 389 (455)
..+.|.|||+++ ....... .... ...+.||..|.++.+..+ ..+.+.|+||++.++.|++.|..||....
T Consensus 162 ~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~ 241 (322)
T KOG1164|consen 162 EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALE 241 (322)
T ss_pred ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccc
Confidence 469999999998 3222211 1111 234679999999996544 67899999999999999999999997654
Q ss_pred chhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 390 TILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.......... ......... ... ..+..+..+...+-..+...+|....+...|++..
T Consensus 242 ~~~~~~~~~~--~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 242 MTDLKSKFEK--DPRKLLTDR-FGD----LKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred ccchHHHHHH--Hhhhhcccc-ccC----CChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 2211111111 000011110 111 12223444444444477999999999999887664
No 411
>KOG1165|consensus
Probab=99.91 E-value=1.3e-23 Score=196.60 Aligned_cols=257 Identities=21% Similarity=0.315 Sum_probs=187.2
Q ss_pred CCCCcCCCccCcCCCeEEEEEEE-cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecc
Q psy5603 169 KPYPRRGNKLGEGQFGTVYYGKL-KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLG 246 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~~-~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~ 246 (455)
.+.|+++++||+|+||..|.|+. -++..||||.-..++. .-++..|....+.| ..++|...|-
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~---------------APQLrdEYr~YKlL~g~~GIP~vYY 91 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE---------------APQLRDEYRTYKLLGGTEGIPQVYY 91 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEeccccCC---------------cchHHHHHHHHHHHcCCCCCCceee
Confidence 35678999999999999999984 3589999998654332 22367788888777 4688888877
Q ss_pred cccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC-----C
Q psy5603 247 LCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-----F 320 (455)
Q Consensus 247 ~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~-----~ 320 (455)
|-.+ .+..||+|.+ |.||+|+..-.++ .++...++.+|.|++.-++|+|+ +.+|.|||||+|+||+.- .
T Consensus 92 FGqeG~~NiLVidLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH~--k~LIYRDIKPdNFLIGrp~~k~~n 166 (449)
T KOG1165|consen 92 FGQEGKYNILVIDLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVHE--KDLIYRDIKPDNFLIGRPGTKDAN 166 (449)
T ss_pred eccccchhhhhhhhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHHh--cceeecccCccceeecCCCCCCCc
Confidence 7766 5678999998 8999998876544 69999999999999999999999 889999999999999743 4
Q ss_pred ceEEeecccccccccCCcceee----eccCCCCCCCCCcc-cccCCCCcccchHHHHHHHHHHHcCCCCCCCCcc---hh
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMY----TENLTGTRPYMPPE-AMHCQISTKTDVFSYGVILLELLTGMKPIDDNNT---IL 392 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~----~~~~~gt~~Y~aPE-~~~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~---~~ 392 (455)
.+.|+|||+|+...+....... .....||..||+-- .+...-+.+-|.-|+|-|++..|-|..||.+... ..
T Consensus 167 ~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~ 246 (449)
T KOG1165|consen 167 VIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKE 246 (449)
T ss_pred eEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHH
Confidence 7899999999987766543322 23468999999988 4544678899999999999999999999998762 23
Q ss_pred hHHHhhh--cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 393 YYYLVVE--QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 393 ~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.+.++-+ ...++.++.. . .+.+....+. ..+-|.+ ..-|..+-+...+.++++
T Consensus 247 kYeKIGe~Kr~T~i~~Lc~----g-~P~efa~Yl~--yvR~L~F--~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 247 KYEKIGETKRSTPIEVLCE----G-FPEEFATYLR--YVRRLDF--FETPDYDYLRKLFDDVLD 301 (449)
T ss_pred HHHHhccccccCCHHHHHh----c-CHHHHHHHHH--HHHhcCc--ccCCCHHHHHHHHHHHHH
Confidence 3333322 1112222211 1 2233333444 3344443 445677666666665553
No 412
>cd08309 Death_IRAK Death domain of Interleukin-1 Receptor-Associated Kinases. Death Domains (DDs) found in Interleukin-1 (IL-1) Receptor-Associated Kinases (IRAK1-4) and similar proteins. IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. All four types are involved in signal transduction involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB, and mitogen-activated protein kinase pathways. IRAK1 and IRAK4 are active kinases while IRAK2 and IRAK-M (also called IRAK3) are inactive. In general, IRAKs are expressed ubiquitously, except for IRAK-M which is detected only in macrophages. The insect homologs, Pelle and Tube, are important components of the Toll pathway, which functions in establishing dorsoventral polarity in embryos and also in the innate immune response. Most members have an N-terminal DD followed by a kinase domain. In general, DDs are protein-protein interaction domains found in a variety of domain a
Probab=99.91 E-value=1.1e-24 Score=173.64 Aligned_cols=92 Identities=27% Similarity=0.459 Sum_probs=88.2
Q ss_pred ceeeecCHHHHHHhhhhcCC--cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCC
Q psy5603 11 IEIRHLKQYVVHELGIILNE--RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRR 88 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~--~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~ 88 (455)
||||+||++++++||.+||+ +++|++||+.|+++.| .+||++.||+.||..++| |+|||++||++||++
T Consensus 1 ~~i~~Lp~~~~~~L~~~LD~~~~~~W~~LA~~i~~~~~---~~~~~~~~i~~~e~~~~~---g~SPt~~LL~~W~~~--- 71 (95)
T cd08309 1 TYIRQLPYSVLARLCKVLDPLELKGWRQLASLIPKGLG---GPRYDLTDVRQIESMKQR---GRSPTRELLWDWGTQ--- 71 (95)
T ss_pred CcceeCCHHHHHHHHHHhCCcccCChHHHHHHhccccc---cCCcCHHHHHHHHHHhhc---CCChHHHHHHHHHhc---
Confidence 79999999999999999999 9999999999999988 889999999999999884 999999999999998
Q ss_pred CCCHHHHHHHHHhcccccccccc
Q psy5603 89 RPRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 89 ~~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
|+||++|+++|.+.++++|++++
T Consensus 72 ~~Tv~~L~~~L~~~~l~~A~~~i 94 (95)
T cd08309 72 NATVQDLVQVLVQLELYRAADLL 94 (95)
T ss_pred CCCHHHHHHHHHHcccHHHHHHh
Confidence 99999999999999999999875
No 413
>cd08795 Death_IRAK2 Death domain of Interleukin 1 Receptor Associated Kinase-2. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase 1 (IRAK1). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors (TLRs), nuclear factor-kappaB (NF-kB), and mitogen-activated protein kinases (MAPKs). IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK2 is an essential component of several signaling pathways, including NF-kappaB and the IL-1 signaling pathways. It is an inactive kinase that participates in septic shock mediated by TLR4 and TLR9. It plays a redundant role with IRAK1 in early NF-kB and MAPK responses, and remains present at later stages whereas IRAK1 disappears. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-as
Probab=99.91 E-value=1e-24 Score=166.53 Aligned_cols=86 Identities=16% Similarity=0.263 Sum_probs=76.9
Q ss_pred eeeecCHHHHHHhhhhcCCcchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCC
Q psy5603 12 EIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 12 ~i~~l~~~~~~~l~~~ld~~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
|||.||++|+++||++||++++|+.++.+.+--+ +|+|+|.||++++ +|+|||+|||++||++ |+|
T Consensus 2 ~iy~lP~~v~~~lc~~lDsl~~w~~~~~a~~~~~--------~q~~vr~ie~~~~---~G~SpT~eLL~~Wg~~---N~T 67 (88)
T cd08795 2 YVYQLPAWVLDDFCRNMDALSDWDWMRFASYVIT--------DQTQLRKIKSMEW---TGVSITRELMWWWGMR---LAT 67 (88)
T ss_pred chhhCCHHHHHHHHHHHcccchHHHHHHHHHhcc--------cHHHHHHHHHHHH---cCCChHHHHHHHHHcC---CCC
Confidence 8999999999999999999999997766554111 2889999999988 5999999999999998 999
Q ss_pred HHHHHHHHHhcccccccccc
Q psy5603 92 LSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~~~~ 111 (455)
|++|+++|.+.+++||++++
T Consensus 68 V~~L~~lL~~~~l~rA~~ii 87 (88)
T cd08795 68 VQQLVDLLQRLELYRAAQII 87 (88)
T ss_pred HHHHHHHHHHCccHHHHHHh
Confidence 99999999999999999865
No 414
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=9.5e-23 Score=197.73 Aligned_cols=257 Identities=31% Similarity=0.462 Sum_probs=191.7
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCcc-ceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV-NLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~- 250 (455)
++...||.|+||.||++.+. ..+|+|.+........ .....|.+|+.++..+.|+ +++++++++..
T Consensus 3 ~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~----------~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~ 70 (384)
T COG0515 3 RILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS----------KEVERFLREIQILASLNHPPNIVKLYDFFQDE 70 (384)
T ss_pred eeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch----------hHHHHHHHHHHHHHHccCCcceeeEEEEEecC
Confidence 45578999999999999986 7899999976544221 1245689999999999988 79999998766
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC-ceEEeeccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF-VPKLGDFGI 329 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~-~~kl~DFGl 329 (455)
...+++++++.++++.+.+........++......++.|++.++.|+|+ .+++|||+||+||+++..+ .++++|||+
T Consensus 71 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~--~~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 71 GSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS--KGIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred CEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh--CCeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 4569999999999999766652211268999999999999999999999 7899999999999999998 799999999
Q ss_pred ccccccCCcce---eeeccCCCCCCCCCcccccC----CCCcccchHHHHHHHHHHHcCCCCCCCCcc----hhhHHHhh
Q psy5603 330 VKMSETSNMKT---MYTENLTGTRPYMPPEAMHC----QISTKTDVFSYGVILLELLTGMKPIDDNNT----ILYYYLVV 398 (455)
Q Consensus 330 a~~~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~----~~~~~sDv~SlGvvl~elltG~~p~~~~~~----~~~~~~~~ 398 (455)
++......... .......||..|+|||.+.+ ..+..+|+||+|++++++++|..||..... ........
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 228 (384)
T COG0515 149 AKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228 (384)
T ss_pred ceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHH
Confidence 88554433211 12356789999999997654 567899999999999999999999776653 11111111
Q ss_pred hcccc-hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 399 EQEVP-VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 399 ~~~~~-~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+ .......... ......+.+++..++..+|..|.+..+...
T Consensus 229 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 229 ELPTPSLASPLSPSNP----ELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred hcCCcccccccCcccc----chhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 11111 1000000000 122345777888999999999999887654
No 415
>cd08796 Death_IRAK-M Death domain of Interleukin 1 Receptor Associated Kinase-M. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase M (IRAK-M). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors(TLRs), nuclear factor-kappaB (NF-kB), and mitogen-activated protein kinases (MAPKs). IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK-M, also called IRAK-3, is an inactive kinase present only in macrophages in an inducible manner. It is a negative regulator of TLR signaling and it contributes to the attenuation of NF-kB activation. DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitme
Probab=99.90 E-value=2.8e-24 Score=165.87 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=78.9
Q ss_pred ceeeecCHHHHHHhhhhcCCcc---hHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCC
Q psy5603 11 IEIRHLKQYVVHELGIILNERD---DWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGR 87 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~~~---~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~ 87 (455)
|.+|.||++|+++||++||+++ +|++||+.|+.+ +.|+|.||++++ +|+|||+|||++||++
T Consensus 1 ~~ly~lP~~v~~~lc~~LDs~~~~~~W~~lA~~i~~~----------~~~vr~ie~~~~---~G~SPT~eLL~~Wg~~-- 65 (89)
T cd08796 1 TLLFDLPPVLLGSLCALLDSGVGGLGWRTLAERLSSS----------WLEVRHIEKYVV---QGKSGTRELLWSWAQK-- 65 (89)
T ss_pred CchhhCCHHHHHHHHHHhcCCCccccHHHHHHHHhcc----------HHHHHHHHHHHH---cCCCcHHHHHHHHHcc--
Confidence 4689999999999999999877 999999999832 889999999988 5999999999999998
Q ss_pred CCCCHHHHHHHHHhcccccccccc
Q psy5603 88 RRPRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 88 ~~~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
|+||++|+++|.+.++++|++++
T Consensus 66 -n~TV~eL~~~L~~~~l~rA~~li 88 (89)
T cd08796 66 -NKTVGDLLQVLDEMGHARAISLF 88 (89)
T ss_pred -CCCHHHHHHHHHHcCcHHHHHhh
Confidence 99999999999999999999865
No 416
>KOG1163|consensus
Probab=99.90 E-value=3.4e-23 Score=186.00 Aligned_cols=253 Identities=21% Similarity=0.269 Sum_probs=181.7
Q ss_pred CCcCCCccCcCCCeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc-cceeeecccc
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH-VNLLRLLGLC 248 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~ 248 (455)
-|++.++||.|+||.+|.|..- +|..||||.-+..+..+ ++.-|..+...+++ ..|..+.-|.
T Consensus 16 ky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hp---------------qL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 16 KYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHP---------------QLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred ceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCCc---------------chhHHHHHHHHhccCCCCchhhhhc
Confidence 3567799999999999999854 59999999986554422 26678888888875 4566666666
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC---CCceEE
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE---NFVPKL 324 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~---~~~~kl 324 (455)
.+ ....+||+.+ |.||++++.-..+ .++..+++-++-|++.-++|+|. +++|||||||+|.|.+- ...+.+
T Consensus 81 ~e~~ynvlVMdLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH~--r~fiHRDIKPdNFLMGlgrh~~kl~L 155 (341)
T KOG1163|consen 81 TEKDYNVLVMDLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVHL--RNFIHRDIKPDNFLMGLGRHCNKLYL 155 (341)
T ss_pred cccccceeeeecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHHh--hccccccCCccceeeccccccceEEE
Confidence 66 6778999998 8999998875433 58999999999999999999999 89999999999999963 457899
Q ss_pred eecccccccccCCccee----eeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCCCCCCCCcch---hhHHH
Q psy5603 325 GDFGIVKMSETSNMKTM----YTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGMKPIDDNNTI---LYYYL 396 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~----~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~~p~~~~~~~---~~~~~ 396 (455)
+|||+++...+...... ......||..|.+--+..| .-+.+.|+-|+|.||....-|..||.+.... ..+..
T Consensus 156 IDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEk 235 (341)
T KOG1163|consen 156 IDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEK 235 (341)
T ss_pred EeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHH
Confidence 99999987665433221 1245689999988775544 4577899999999999999999999987633 33333
Q ss_pred hhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHH
Q psy5603 397 VVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLS 450 (455)
Q Consensus 397 ~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~ 450 (455)
+.+.....+ +..-... .+..+...+.-|=...-++-|...-+-+.+.
T Consensus 236 I~EkK~s~~--ie~LC~G-----~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFr 282 (341)
T KOG1163|consen 236 ISEKKMSTP--IEVLCKG-----FPAEFAMYLNYCRGLGFEEKPDYMYLRQLFR 282 (341)
T ss_pred HHHhhcCCC--HHHHhCC-----CcHHHHHHHHHHhhcCCCCCCcHHHHHHHHH
Confidence 333222111 1111111 2233444455565555666666655544443
No 417
>KOG0195|consensus
Probab=99.90 E-value=3.7e-24 Score=195.14 Aligned_cols=247 Identities=25% Similarity=0.365 Sum_probs=188.1
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
.+|.+...|..|+|+|. |..+++|+++........ ...|..|.-.|+-+.||||++++|.|.. ..+.
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~ri-----------srdfneefp~lrifshpnilpvlgacnsppnlv 263 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARI-----------SRDFNEEFPALRIFSHPNILPVLGACNSPPNLV 263 (448)
T ss_pred hhhccCCCccccccccc-Ccchhhhhhhhhhcchhh-----------cchhhhhCcceeeecCCchhhhhhhccCCCCce
Confidence 56899999999999997 677888988755432221 2238889999999999999999999988 7889
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
++..||+-|||+..|+... +-..+-.++.+++..+++|++|||+...-|----+.+..+++|++..++|+= +-++++-
T Consensus 264 ~isq~mp~gslynvlhe~t-~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarism-ad~kfsf 341 (448)
T KOG0195|consen 264 IISQYMPFGSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISM-ADTKFSF 341 (448)
T ss_pred EeeeeccchHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheec-ccceeee
Confidence 9999999999999999755 3457788999999999999999999853344447899999999999888752 2222211
Q ss_pred cCCcceeeeccCCCCCCCCCcccccCCC----CcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccch
Q psy5603 335 TSNMKTMYTENLTGTRPYMPPEAMHCQI----STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDK 410 (455)
Q Consensus 335 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~ 410 (455)
. .....-.++||+||.+.... -.++|+|||+++|||+.|...||.+.....--.++..+....
T Consensus 342 q-------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv------ 408 (448)
T KOG0195|consen 342 Q-------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRV------ 408 (448)
T ss_pred e-------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccc------
Confidence 1 11224578899999876543 237899999999999999999998876543333332222111
Q ss_pred hccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhh
Q psy5603 411 EAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSV 453 (455)
Q Consensus 411 ~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~ 453 (455)
.-+..++.....|+.-|.+.||.+||.++.|+-.|++++
T Consensus 409 ----~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 409 ----HIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ----cCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 112234455777888999999999999999999999875
No 418
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.89 E-value=8.7e-23 Score=185.84 Aligned_cols=152 Identities=16% Similarity=0.163 Sum_probs=111.2
Q ss_pred CCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCC------Cc-------hhhhhhhhHHHHHHHHHHHhhCCccce
Q psy5603 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSN------SD-------NTEAAMIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~------~~-------~~~~~~~~~~~~~~E~~~l~~l~h~ni 241 (455)
...||+|+||.||+|...+|+.||||+++......... .. ......+......+|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 36799999999999998789999999998653211110 00 000001112234569999999988776
Q ss_pred eeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCeeecCCCCCcEEEcCCC
Q psy5603 242 LRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYL-HSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~L-H~~~~~iiH~Dikp~NILl~~~~ 320 (455)
.....+.. ...++||||++|+++...... ..+++......++.|++.+|.++ |+ .||+||||||+|||++ ++
T Consensus 82 ~~p~~~~~-~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~l~H~--~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL-KSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRILYQD--CRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe-cCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHHHHHh--CCcccCCCCHHHEEEE-CC
Confidence 43333222 234899999998877655333 23688999999999999999999 68 7899999999999998 47
Q ss_pred ceEEeeccccccc
Q psy5603 321 VPKLGDFGIVKMS 333 (455)
Q Consensus 321 ~~kl~DFGla~~~ 333 (455)
.++|+|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999998754
No 419
>KOG0590|consensus
Probab=99.89 E-value=1.5e-23 Score=220.63 Aligned_cols=258 Identities=20% Similarity=0.258 Sum_probs=184.5
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN- 250 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~- 250 (455)
..+..+|.|++|.|+...... ...++.|..+.. ..... ..... ...+..|+-+-..+.|||++..+....+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~~~~--s~~~~----~~~i~sE~~i~~~l~h~~~~e~l~~~~~~ 393 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VKPTE--SERKY----NYNITSEFCIGSSLSHPNIIETLDIVQEI 393 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcc-cCCcc--cHHHH----hhhhhhheeecccccCCchhhhHHHHhhc
Confidence 456889999999888776532 444555554321 10000 11111 1226678888899999999998886665
Q ss_pred ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 251 IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 251 ~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
....-+||||++ +|..++... ..++...+..++.|++.|+.|+|+ .||.|||+|++|+++..+|.+||+|||.+
T Consensus 394 ~~~~~~mE~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~--~GiahrdlK~enll~~~~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 394 DGILQSMEYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHS--MGLAHRDLKLENLLVTENGILKIIDFGAA 467 (601)
T ss_pred ccchhhhhcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHh--cCceeccCccccEEEecCCceEEeecCcc
Confidence 444445999999 999999873 358888999999999999999999 88999999999999999999999999998
Q ss_pred cccccCCcc-eeeeccCCCCCCCCCcccccC-CCCc-ccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 331 KMSETSNMK-TMYTENLTGTRPYMPPEAMHC-QIST-KTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~-~~~~-~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
......... ......++|+.+|+|||++.+ .+.+ ..||||.|+++..|.+|+.||.........+.........
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~--- 544 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQR--- 544 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccccc---
Confidence 876554322 244567899999999997755 5655 6799999999999999999997654321111000000000
Q ss_pred cchhccCCC-hhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 408 LDKEAGEWN-ETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 408 ~d~~~~~~~-~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
....+.+. ....+..-+.+|.++++.+|.+|.++.+|++
T Consensus 545 -~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 545 -NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred -ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 00001111 2344555677899999999999999999975
No 420
>PF14786 Death_2: Tube Death domain; PDB: 1D2Z_B.
Probab=99.88 E-value=1.3e-23 Score=170.71 Aligned_cols=118 Identities=44% Similarity=0.791 Sum_probs=90.8
Q ss_pred CCCceeeecCHHHHHHhhhhcCCcchHHHHHHhhhcCCCCCC----C-----CCcchHHHHHHHHhcccCCCCCCchHHH
Q psy5603 8 TEDIEIRHLKQYVVHELGIILNERDDWKKIMSIVTVDCDPLK----P-----LKYSAKDIKIVERAGKRNFPERGCTDIF 78 (455)
Q Consensus 8 ~~~~~i~~l~~~~~~~l~~~ld~~~~w~~~~~~i~~~~~~~~----~-----~~~~~~~~~~~e~~~~~~~~~~s~t~~l 78 (455)
+.+|+||+||++.+.+|+.|||.+ |++||+.||+..|+.. + +||+.+|++.||..++| .+++|||+.|
T Consensus 2 ~r~tEiRkl~~~~~~~L~~ILd~~--WrklM~~IPk~l~d~~~~~~~~~~~~~KYt~~hi~~Ie~~a~r-~~~~s~s~il 78 (137)
T PF14786_consen 2 TRNTEIRKLPPSDLYRLASILDIN--WRKLMSIIPKKLGDVQQPSGSGLYPIPKYTSQHISLIEEAAER-LQNRSCSEIL 78 (137)
T ss_dssp -TTSBGGGS-HHHHHHHHHHHHGG--HHHHHHH-BSS---HHHHHSTT-HHHBSS-HHHHHHHHHHHHH-STTS-HHHHH
T ss_pred CccchhhcCCHHHHHHHHHHhchh--HHHHHHHccccccccccccccccccccccchhHHHHHHHHHHh-ccCCcHHHHH
Confidence 678999999999999999999987 9999999999864322 2 59999999999999963 2899999999
Q ss_pred HHhhhcCCCC--CCCHHHHHHHHHhccccccccccccccccC--CCCCCCCchh
Q psy5603 79 LDEWGTSGRR--RPRLSDLIMFLKKAELHQAARYVEVDVLKK--PESPGDNTEA 128 (455)
Q Consensus 79 l~~w~~~~~~--~~~~~~l~~~l~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~ 128 (455)
|++|||+|+. ++||++|+++|.+++++|||+++..+.++. |++|..++.+
T Consensus 79 ldEWgTSGr~~eRPTl~~Ll~LLvkael~rAADyva~~~Lke~~p~RP~~GPaA 132 (137)
T PF14786_consen 79 LDEWGTSGRKNERPTLGHLLQLLVKAELFRAADYVAVDILKEEPPARPDDGPAA 132 (137)
T ss_dssp HHHHHT-SSTTTS-BHHHHHHHHHHTT-HHHHHHHHHHTT--------SSSTTS
T ss_pred HHHhhccCcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Confidence 9999999987 999999999999999999999999888876 4556555554
No 421
>KOG1240|consensus
Probab=99.88 E-value=2.9e-23 Score=219.04 Aligned_cols=243 Identities=23% Similarity=0.298 Sum_probs=175.0
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHH--HhhCCccceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQT--LSQCKHVNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~-~~ 252 (455)
+.||++.|=+|.+|++++|. |+||++-+...... ...|.++++- ....+|||++++.-.-.. ..
T Consensus 29 ~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~s------------L~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kA 95 (1431)
T KOG1240|consen 29 ENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTIS------------LRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKA 95 (1431)
T ss_pred cccCchhhhhhhhccCCCce-EEEEEEeccCCCCC------------chHHHHHHHHHHHHhhcCCcccchHHHHHhhHH
Confidence 77999999999999998765 99999865543221 2224443333 445689999998876554 56
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.|+|-+|. .-+|+|+|.. .+-+...+...|+.|++.||.-+|+ .||+|||||.+|||++.-+.+.|+||...+.
T Consensus 96 AylvRqyv-khnLyDRlST---RPFL~~iEKkWiaFQLL~al~qcH~--~gVcHGDIKsENILiTSWNW~~LtDFAsFKP 169 (1431)
T KOG1240|consen 96 AYLVRQYV-KHNLYDRLST---RPFLVLIEKKWIAFQLLKALSQCHK--LGVCHGDIKSENILITSWNWLYLTDFASFKP 169 (1431)
T ss_pred HHHHHHHH-hhhhhhhhcc---chHHHHHHHHHHHHHHHHHHHHHHH--cCccccccccceEEEeeechhhhhcccccCC
Confidence 67888888 5799999986 5678889999999999999999999 8899999999999999999999999987664
Q ss_pred cccCCcce----eeeccCCCCCCCCCcccccC------------CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHH
Q psy5603 333 SETSNMKT----MYTENLTGTRPYMPPEAMHC------------QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYY 395 (455)
Q Consensus 333 ~~~~~~~~----~~~~~~~gt~~Y~aPE~~~~------------~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~ 395 (455)
.......+ .+..+..--..|+|||.|.. ..+++.||||+|||++||++ |++||.-.. ... +
T Consensus 170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ-L~a-Y 247 (1431)
T KOG1240|consen 170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ-LLA-Y 247 (1431)
T ss_pred ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH-HHh-H
Confidence 43332222 11122233346999996621 14678999999999999999 788886321 111 1
Q ss_pred HhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 396 LVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 396 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
... +......++.. +.. ..++++|..|++.||.+|.+++++++.
T Consensus 248 r~~-~~~~~e~~Le~-Ied-------~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 248 RSG-NADDPEQLLEK-IED-------VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred hcc-CccCHHHHHHh-CcC-------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111 01111111111 110 027888999999999999999999876
No 422
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=2.6e-21 Score=176.38 Aligned_cols=154 Identities=16% Similarity=0.199 Sum_probs=112.7
Q ss_pred CCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCc---------h----hhhhhhhHHHHHHHHHHHhhCCccce
Q psy5603 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSD---------N----TEAAMIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~---------~----~~~~~~~~~~~~~E~~~l~~l~h~ni 241 (455)
...||+|+||.||+|.+.+|+.||||+++........... . ..........+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3679999999999999878999999999875321100000 0 00001112335689999999999987
Q ss_pred eeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 242 LRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
.....+... ..++||||++|+++...... ..+++......++.+++.++.++|+. .||+||||||+|||++ ++.
T Consensus 82 ~~p~~~~~~-~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH~~-~givHrDlkP~NIll~-~~~ 155 (190)
T cd05145 82 PVPEPILLK-KNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLYQE-AGLVHGDLSEYNILYH-DGK 155 (190)
T ss_pred CCceEEEec-CCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHHHh-CCEecCCCChhhEEEE-CCC
Confidence 544333222 34899999998865443222 23578889999999999999999972 4699999999999999 889
Q ss_pred eEEeecccccccc
Q psy5603 322 PKLGDFGIVKMSE 334 (455)
Q Consensus 322 ~kl~DFGla~~~~ 334 (455)
++|+|||+++...
T Consensus 156 ~~liDFG~a~~~~ 168 (190)
T cd05145 156 PYIIDVSQAVELD 168 (190)
T ss_pred EEEEEcccceecC
Confidence 9999999987654
No 423
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=1.3e-21 Score=177.27 Aligned_cols=190 Identities=18% Similarity=0.177 Sum_probs=140.7
Q ss_pred CCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccCcee
Q psy5603 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNNIMN 253 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~ 253 (455)
...|++|+||+||.+.. .+.+++.+.+........ ......|.+|+++|+++. |+++.+++++ ...
T Consensus 7 ~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~---------~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---~~~ 73 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLR---------GVAWWLARREALALRQLDGLPRTPRLLHW---DGR 73 (218)
T ss_pred ceeecCCCcceEEEeec-CCceeeecccccchhhhh---------hHHHHHHHHHHHHHHhcCCCCCCCEEEEE---cCE
Confidence 47899999999998876 478888887754322100 111235889999999995 5788888876 346
Q ss_pred EEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCC-CCCcEEEcCCCceEEeecccccc
Q psy5603 254 CIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDV-KSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Di-kp~NILl~~~~~~kl~DFGla~~ 332 (455)
+++|+|+.|.+|.+.+.. ....++.+++.+|.++|+ +||+|||| ||+|||++.++.++|+|||++..
T Consensus 74 ~lvmeyI~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH~--~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~ 141 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR----------GDLAYFRAARRLLQQLHR--CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVR 141 (218)
T ss_pred EEEEeeecCccHHhhhhh----------hhHHHHHHHHHHHHHHHH--CcCccCCCCCcceEEEcCCCCEEEEECCCcee
Confidence 899999999999754321 113577899999999999 88999999 79999999999999999999985
Q ss_pred cccCCcc------e----eeeccCCCCCCCCCcccc--cCCCC-cccchHHHHHHHHHHHcCCCCCCCCc
Q psy5603 333 SETSNMK------T----MYTENLTGTRPYMPPEAM--HCQIS-TKTDVFSYGVILLELLTGMKPIDDNN 389 (455)
Q Consensus 333 ~~~~~~~------~----~~~~~~~gt~~Y~aPE~~--~~~~~-~~sDv~SlGvvl~elltG~~p~~~~~ 389 (455)
....... . ..+-....++.|+.|+.. ....+ ...++++-|.-+|.++|+..+..+++
T Consensus 142 ~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 142 GNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred cCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 5433210 0 001112367888888843 33444 57899999999999999998877654
No 424
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=1.4e-21 Score=180.78 Aligned_cols=176 Identities=12% Similarity=0.104 Sum_probs=127.2
Q ss_pred CCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN 250 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 250 (455)
.|++.+.||.|+||.||+... ++..+|||.++......... ......-..+.+|++.+.++.|++|..+..++..
T Consensus 32 ~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~----~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 32 NIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERF----LKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred ceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHH----HHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 456779999999999999766 46789999997554311100 0000011226899999999999999998876432
Q ss_pred ---------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 251 ---------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 251 ---------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
...++||||++|.+|.+... ++. ....+++.++..+|+ .|++|||+||+||+++++|
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH~--~gi~H~Dikp~Nili~~~g- 172 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLHQ--HGMVSGDPHKGNFIVSKNG- 172 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHHH--cCCccCCCChHHEEEeCCC-
Confidence 24789999999999988632 232 245699999999999 8899999999999999998
Q ss_pred eEEeecccccccccCCcceeeeccCCCCCCCCCcccccCCCCcccchHHHHHHHHHHH
Q psy5603 322 PKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELL 379 (455)
Q Consensus 322 ~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~sDv~SlGvvl~ell 379 (455)
++|+|||..+......... . | ++...+..++|+||||+++.-..
T Consensus 173 i~liDfg~~~~~~e~~a~d----~------~----vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 173 LRIIDLSGKRCTAQRKAKD----R------I----DLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEEECCCcccccchhhHH----H------H----HHHhHhcccccccceeEeehHHH
Confidence 9999999776443211000 0 0 12233557899999999876554
No 425
>KOG0603|consensus
Probab=99.85 E-value=2.3e-22 Score=203.08 Aligned_cols=225 Identities=24% Similarity=0.301 Sum_probs=177.8
Q ss_pred cCcCCCeEEEEEEE----cCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccC-c
Q psy5603 178 LGEGQFGTVYYGKL----KNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNN-I 251 (455)
Q Consensus 178 LG~G~fg~Vy~~~~----~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~ 251 (455)
+|+|+||.|+++.. +.|.-+|.|++++........ .....|-.++..++ ||.+|++.-.+.. .
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~-----------~~t~~er~il~~~~~~~f~v~lhyafqt~~ 70 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDR-----------THTKQERIILAFVHNTPFLVKLHYAFQTDG 70 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccc-----------cccccHHHHHhhccCCCceeeeeeeecccc
Confidence 79999999997652 237789999998765432221 12456788888886 9999999876655 8
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..+++++|..||.|..++.. ...+.......+...++-++.++|+ .+++|||+|++||+++.+|++++.|||+++
T Consensus 71 kl~l~ld~~rgg~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~--l~iiyrd~k~enilld~~Ghi~~tdfglsk 145 (612)
T KOG0603|consen 71 KLYLILDFLRGGDLFTRLSK---EVMFDELDVAFYLAELALALDHLHK--LGIAYRDYKLENVLLLLEGHIKLTDFGLSK 145 (612)
T ss_pred chhHhhhhcccchhhhcccc---CCchHHHHHHHHHHHHHHHHhhcch--hHHHHhcccccceeecccCccccCCchhhh
Confidence 88999999999999998876 3457788888889999999999999 789999999999999999999999999998
Q ss_pred ccccCCcceeeeccCCCCCCCCCcccccCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchh
Q psy5603 332 MSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKE 411 (455)
Q Consensus 332 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~ 411 (455)
....... .+||..|||||++. .....+|.||||++.+||+||..||.. .....+...+..
T Consensus 146 e~v~~~~-------~cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~-------- 205 (612)
T KOG0603|consen 146 EAVKEKI-------ACGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELE-------- 205 (612)
T ss_pred HhHhhhh-------cccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccC--------
Confidence 7654431 18999999999887 667789999999999999999999987 222222211222
Q ss_pred ccCCChhHHHHHHHHHHHhhhccCcCCCCCH
Q psy5603 412 AGEWNETHVETLISIVFEKCCVFEKDKRASM 442 (455)
Q Consensus 412 ~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~ 442 (455)
.+......+++++..++..+|.+|.-.
T Consensus 206 ----~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 ----MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred ----CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 234556668888888888899888644
No 426
>cd08794 Death_IRAK1 Death domain of Interleukin 1 Receptor Associated Kinase-1. Death Domain (DD) of Interleukin-1 Receptor-Associated Kinase 1 (IRAK1). IRAKs are essential components of innate immunity and inflammation in mammals and other vertebrates. They are involved in signal transduction pathways involving IL-1 and IL-18 receptors, Toll-like receptors, nuclear factor-kappaB (NF-kB), and mitogen-activated protein kinases (MAPKs). IRAKs contain an N-terminal DD domain and a C-terminal kinase domain. IRAK1 is an active kinase and also plays adaptor functions. It binds to the MyD88-IRAK4 complex via its DD, which facilitates its phosphorylation by IRAK4, activating it for further auto-phosphorylation. Hyper-phosphorylated IRAK1 forms a cytosolic complex with TRAF6, leading to the activation of NF-kB and MAPK pathways. IRAK1 is involved in autoimmunity and may be associated with lupus pathogenesis. DDs are protein-protein interaction domains found in a variety of domain architectures.
Probab=99.85 E-value=1.6e-21 Score=143.16 Aligned_cols=81 Identities=19% Similarity=0.390 Sum_probs=75.3
Q ss_pred ceeeecCHHHHHHhhhhcCC--cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCC
Q psy5603 11 IEIRHLKQYVVHELGIILNE--RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRR 88 (455)
Q Consensus 11 ~~i~~l~~~~~~~l~~~ld~--~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~ 88 (455)
.|+|+||++|+.+||.+||+ +.+|.+||+.|.+| |+++|.+|+ ++|+|.||+|.||++
T Consensus 1 ~~Ly~lP~~vm~~fc~~MDsls~~dW~~fAS~ii~d----------qtelR~~E~-------~~s~T~elmw~W~~R--- 60 (84)
T cd08794 1 RFLYELPPSVMWRFCLVMDSLSDLDWTRFASEIIKD----------QTELRLLEQ-------SGRRTDWVMWRWENR--- 60 (84)
T ss_pred CccccCCHHHHHHHHHHHcccccccHHHHHHHHhcc----------HHHHHHHHH-------cCCcHHHHHHHHHhc---
Confidence 38999999999999999999 67899999999998 999999992 448999999999998
Q ss_pred CCCHHHHHHHHHhcccccccccc
Q psy5603 89 RPRLSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 89 ~~~~~~l~~~l~~~~l~~~~~~~ 111 (455)
|+||++|+++|.+.+++||++++
T Consensus 61 n~tV~~Ll~iL~~L~l~RA~~ii 83 (84)
T cd08794 61 NGRVGELLDILERLQLLRARDVI 83 (84)
T ss_pred ccHHHHHHHHHHHhhhhhhhhhh
Confidence 99999999999999999999865
No 427
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.85 E-value=6.5e-21 Score=181.44 Aligned_cols=232 Identities=22% Similarity=0.283 Sum_probs=147.9
Q ss_pred cCCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc----------cc-
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH----------VN- 240 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h----------~n- 240 (455)
..+..||.|+|+.||.+++.. |+.+|||++...... .....+.+.+|.-....+.+ -.
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~----------~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~ 84 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADA----------SANEYEQLKEEQLAITLFPGVKNPKEAYRHLRF 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTT----------HTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEeccccc----------chHHHHHHHHHHHHhhhhccCCCHHHHHHhceE
Confidence 345789999999999999974 899999998765421 11124556666655444322 11
Q ss_pred -----eeeecc---cc---cC-c-----eeEEEEEeccCCCHHHHHhh---cCC-CCCCCHHHHHHHHHHHHHHHHHHHc
Q psy5603 241 -----LLRLLG---LC---NN-I-----MNCIVYEYMCNGSLYDRLAR---VNN-TPPLDSNKRYSIALGVAEALHYLHS 299 (455)
Q Consensus 241 -----iv~l~~---~~---~~-~-----~~~lV~e~~~~gsL~~~l~~---~~~-~~~l~~~~~~~i~~~i~~gl~~LH~ 299 (455)
++++-+ +. .+ . ..+++|+-+ .++|.+.+.. ... ..++....++.+..|+++.+++||+
T Consensus 85 l~P~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~ 163 (288)
T PF14531_consen 85 LVPLDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHS 163 (288)
T ss_dssp ---SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeeeEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhh
Confidence 122211 11 11 1 236788877 6888887542 111 1234556677888999999999999
Q ss_pred CCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccC---------CCCcccchHH
Q psy5603 300 LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHC---------QISTKTDVFS 370 (455)
Q Consensus 300 ~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---------~~~~~sDv~S 370 (455)
.|++|+||+|+|++++++|.++|+||+.....+... .. ...+..|.|||.... .++.+.|.|+
T Consensus 164 --~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~-----~~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~ 235 (288)
T PF14531_consen 164 --YGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY-----RC-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQ 235 (288)
T ss_dssp --TTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE-----EG-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHH
T ss_pred --cceEecccceeeEEEcCCCCEEEcChHHHeecCcee-----ec-cCCCcccCChhhhhhhcccCcccceeeeccCHHH
Confidence 889999999999999999999999999776543321 11 244577999995522 2577899999
Q ss_pred HHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCC
Q psy5603 371 YGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKR 439 (455)
Q Consensus 371 lGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~R 439 (455)
||+++|.|.+|..||.......... . ...... .+++.++.||.++|..+|++|
T Consensus 236 LG~~ly~lWC~~lPf~~~~~~~~~~---------~-----~f~~C~--~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 236 LGITLYSLWCGRLPFGLSSPEADPE---------W-----DFSRCR--DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHHHHHSS-STCCCGGGSTSG---------G-----GGTTSS-----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHHHHHccCCCCCCCcccccc---------c-----cchhcC--CcCHHHHHHHHHHccCCcccC
Confidence 9999999999999998664221100 0 122222 678889999999999999987
No 428
>KOG1023|consensus
Probab=99.82 E-value=3.9e-20 Score=186.77 Aligned_cols=211 Identities=27% Similarity=0.404 Sum_probs=157.1
Q ss_pred HhhCCccceeeecccccC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCe-eecCCC
Q psy5603 233 LSQCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPI-IHRDVK 310 (455)
Q Consensus 233 l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~i-iH~Dik 310 (455)
|+.+.|.|+.+++|.+.+ ...+.|.+||..|||.|.+... ...+++-....++..++.||.|||+ .+| .|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeec
Confidence 457899999999999887 7888999999999999999873 3468999999999999999999999 444 999999
Q ss_pred CCcEEEcCCCceEEeecccccccccCCcceeeeccCCCCCCCCCcccccCC--------CCcccchHHHHHHHHHHHcCC
Q psy5603 311 SANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ--------ISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 311 p~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--------~~~~sDv~SlGvvl~elltG~ 382 (455)
+.|.++|..+.+||+|||+........... ......-..-|.|||.+.+. .+.+.|+||||++++|+++..
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~-~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPE-AHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred cccceeeeeEEEEechhhhccccccccccc-ccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999987664311000 01111233458999987553 466899999999999999999
Q ss_pred CCCCCCcchh----hHHHhhh-cccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHHHHhhhc
Q psy5603 383 KPIDDNNTIL----YYYLVVE-QEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDLLSKSVN 454 (455)
Q Consensus 383 ~p~~~~~~~~----~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~L~~~~~ 454 (455)
.||+...... ....+.. ....+...+.. .......+..+++.||..+|.+||++++|-..++.+.+
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~------~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL------LNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred CccccccccCChHHHHHHHHhcCCCCcCcchhh------hhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9998754211 1111111 11111111110 11233357778999999999999999999988877654
No 429
>smart00090 RIO RIO-like kinase.
Probab=99.81 E-value=1.1e-19 Score=171.20 Aligned_cols=157 Identities=15% Similarity=0.155 Sum_probs=113.8
Q ss_pred CCCCcCCCccCcCCCeEEEEEE--EcCCcEEEEEEeecccCcCCCCC------c-----hhhhhhhhHHHHHHHHHHHhh
Q psy5603 169 KPYPRRGNKLGEGQFGTVYYGK--LKNGMEIAVKTLENNANYSSSNS------D-----NTEAAMIPILLFENEVQTLSQ 235 (455)
Q Consensus 169 ~~~~~~~~~LG~G~fg~Vy~~~--~~~~~~vAvK~~~~~~~~~~~~~------~-----~~~~~~~~~~~~~~E~~~l~~ 235 (455)
...|.+.+.||+|+||.||+|. ..+|+.||||+++.......... . ...........+..|+.++.+
T Consensus 27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~ 106 (237)
T smart00090 27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR 106 (237)
T ss_pred CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 3455677999999999999998 45689999999975432110000 0 000001112346789999999
Q ss_pred CCccc--eeeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-eeecCCCCC
Q psy5603 236 CKHVN--LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-IIHRDVKSA 312 (455)
Q Consensus 236 l~h~n--iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~-iiH~Dikp~ 312 (455)
+.+.+ +.+++++ ...++||||+.|++|...... ..++.......++.|++.++++||+ .| ++||||||+
T Consensus 107 L~~~~i~~p~~~~~---~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~--~g~iiH~Dikp~ 178 (237)
T smart00090 107 LYEAGVPVPKPIAW---RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYK--EGELVHGDLSEY 178 (237)
T ss_pred HHhcCCCCCeeeEe---cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHh--cCCEEeCCCChh
Confidence 97532 3333432 345899999999888765432 2346667778999999999999999 88 999999999
Q ss_pred cEEEcCCCceEEeecccccccc
Q psy5603 313 NVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 313 NILl~~~~~~kl~DFGla~~~~ 334 (455)
||+++ ++.++|+|||.+....
T Consensus 179 NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 179 NILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hEEEE-CCCEEEEEChhhhccC
Confidence 99999 8899999999877543
No 430
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=5.7e-19 Score=162.53 Aligned_cols=132 Identities=14% Similarity=0.232 Sum_probs=100.6
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-----CccceeeecccccC
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-----KHVNLLRLLGLCNN 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~ 250 (455)
..||+|+||.||. +......+||++...... ....+.+|+.+++++ .||||++++|++.+
T Consensus 8 ~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~-------------~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et 72 (210)
T PRK10345 8 SPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG-------------GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVET 72 (210)
T ss_pred ceecCCCceEEEE--CCCCcCeEEEEEeccccc-------------hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEe
Confidence 7899999999996 433233479988653210 134488999999999 57999999998866
Q ss_pred c----eeE-EEEEe--ccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH-HHHHcCCCCeeecCCCCCcEEEcC----
Q psy5603 251 I----MNC-IVYEY--MCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEAL-HYLHSLSKPIIHRDVKSANVLLDE---- 318 (455)
Q Consensus 251 ~----~~~-lV~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl-~~LH~~~~~iiH~Dikp~NILl~~---- 318 (455)
+ ..+ +|+|| +.+|+|.+++... .+++. ..++.+++.++ +|||+ ++|+||||||+|||++.
T Consensus 73 ~~g~g~v~~~I~e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~--~~IvhrDlKp~NILl~~~~~~ 144 (210)
T PRK10345 73 DCGTGYVYDVIADFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLD--NRIVTMELKPQNILCQRISES 144 (210)
T ss_pred CCCCeEEEEEEecCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHH--CCEeecCCCHHHEEEeccCCC
Confidence 3 223 78999 5579999999652 35555 35678888887 99999 88999999999999974
Q ss_pred CCceEEee-cccc
Q psy5603 319 NFVPKLGD-FGIV 330 (455)
Q Consensus 319 ~~~~kl~D-FGla 330 (455)
++.++|+| ||..
T Consensus 145 ~~~~~LiDg~G~~ 157 (210)
T PRK10345 145 EVIPVVCDNIGES 157 (210)
T ss_pred CCcEEEEECCCCc
Confidence 34899999 4543
No 431
>KOG1166|consensus
Probab=99.79 E-value=6.1e-19 Score=189.79 Aligned_cols=188 Identities=22% Similarity=0.232 Sum_probs=146.6
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccce----eeecccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL----LRLLGLC 248 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni----v~l~~~~ 248 (455)
.+.+.||+|+||.||+|...+|+.||+|+-+...... |+--.+++.||+ +-+ .++...+
T Consensus 701 ~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE----------------fYI~~q~~~RLk-~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 701 CISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE----------------FYICLQVMERLK-PQMLPSIMHISSAH 763 (974)
T ss_pred EEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee----------------eeehHHHHHhhc-hhhhcchHHHHHHH
Confidence 4568899999999999998889999999986554321 333455566666 333 3333322
Q ss_pred cC-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEc-------CCC
Q psy5603 249 NN-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLD-------ENF 320 (455)
Q Consensus 249 ~~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~-------~~~ 320 (455)
.- +.-+||++|.+-|||.+++.. ...++|..++.++.|+++-+.+||. .+||||||||+|.||. ++.
T Consensus 764 ~~~~~S~lv~ey~~~Gtlld~~N~---~~~m~e~lv~~~~~qml~ive~lH~--~~IIHgDiKPDNfll~~~~~~~~~~~ 838 (974)
T KOG1166|consen 764 VFQNASVLVSEYSPYGTLLDLINT---NKVMDEYLVMFFSCQMLRIVEHLHA--MGIIHGDIKPDNFLLRREICADSDSK 838 (974)
T ss_pred ccCCcceeeeeccccccHHHhhcc---CCCCCchhhhHHHHHHHHHHHHHHh--cceecccCCcceeEeecccCCCCccc
Confidence 22 444799999999999999984 5579999999999999999999999 7899999999999993 345
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCcccccCC-CCcccchHHHHHHHHHHHcCCC
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQ-ISTKTDVFSYGVILLELLTGMK 383 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~sDv~SlGvvl~elltG~~ 383 (455)
.++|+|||-+.....-...+ .....++|-.+-.+|+..|+ +++.+|.|.|+.+++-||.|..
T Consensus 839 ~l~lIDfG~siDm~lfp~~~-~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 839 GLYLIDFGRSIDMKLFPDGT-KFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ceEEEecccceeeeEcCCCc-EEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 78999999876544332221 23456788999999988775 7999999999999999999853
No 432
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.79 E-value=7.1e-19 Score=161.40 Aligned_cols=149 Identities=17% Similarity=0.182 Sum_probs=109.2
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhh---------hhhhhHHHHHHHHHHHhhCCccc--
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTE---------AAMIPILLFENEVQTLSQCKHVN-- 240 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~E~~~l~~l~h~n-- 240 (455)
|.+.+.||+|+||.||+|..++|+.||||+++.............. ........+..|..++..+.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 4455889999999999999888999999998754311110000000 00111234678999999998774
Q ss_pred eeeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 241 LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 241 iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+...++ ....++||||++|++|...... .....++.+++.++.++|+ .|++||||||+||++++++
T Consensus 97 v~~~~~---~~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~--~gi~H~Dl~p~Nill~~~~ 162 (198)
T cd05144 97 VPKPID---WNRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYK--HGIIHGDLSEFNILVDDDE 162 (198)
T ss_pred CCceee---cCCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHH--CCCCcCCCCcccEEEcCCC
Confidence 333333 3456899999999999765321 2356788999999999999 8899999999999999999
Q ss_pred ceEEeecccccccc
Q psy5603 321 VPKLGDFGIVKMSE 334 (455)
Q Consensus 321 ~~kl~DFGla~~~~ 334 (455)
.++|+|||++....
T Consensus 163 ~~~liDfg~~~~~~ 176 (198)
T cd05144 163 KIYIIDWPQMVSTD 176 (198)
T ss_pred cEEEEECCccccCC
Confidence 99999999986443
No 433
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=1.6e-18 Score=160.46 Aligned_cols=141 Identities=19% Similarity=0.218 Sum_probs=112.9
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
+.||+|++|.||+|.+. |..|+||+........ ...........+.+|+.++..+.|+++.....++.+ ...+
T Consensus 2 ~~l~~G~~~~vy~~~~~-~~~~~vK~~~~~~~~~-----~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~ 75 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFL-GIKAVIKWRIPKRYRH-----PELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFI 75 (211)
T ss_pred cccccCceEEEEEEeeC-CCceEEEEeCCcCCcC-----hHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCE
Confidence 57999999999999984 7889999875332111 111112234568899999999999988776665544 6778
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
+||||++|++|.+.+... .. .+..++.+++.+|.++|+ .+++|||++|+|||++ ++.++|+|||.++.
T Consensus 76 lv~e~~~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~--~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSN------GM-EELELSREIGRLVGKLHS--AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EEEEEeCCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHh--CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999999999998652 12 888999999999999999 8899999999999999 78999999998765
No 434
>KOG4158|consensus
Probab=99.78 E-value=1.7e-18 Score=165.86 Aligned_cols=196 Identities=21% Similarity=0.248 Sum_probs=138.2
Q ss_pred CccceeeecccccC----------------------------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHH
Q psy5603 237 KHVNLLRLLGLCNN----------------------------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIAL 288 (455)
Q Consensus 237 ~h~niv~l~~~~~~----------------------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 288 (455)
+|||||++++++.+ ...|+||.-+ ..+|.+++... ..+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcC----CCchHHHHHHHH
Confidence 69999999875522 2347888877 57899998763 356667778899
Q ss_pred HHHHHHHHHHcCCCCeeecCCCCCcEEE--cCCC--ceEEeecccccccccCCcce---eeeccCCCCCCCCCcccccCC
Q psy5603 289 GVAEALHYLHSLSKPIIHRDVKSANVLL--DENF--VPKLGDFGIVKMSETSNMKT---MYTENLTGTRPYMPPEAMHCQ 361 (455)
Q Consensus 289 ~i~~gl~~LH~~~~~iiH~Dikp~NILl--~~~~--~~kl~DFGla~~~~~~~~~~---~~~~~~~gt~~Y~aPE~~~~~ 361 (455)
|+++|+.|||+ +|+.|||+|++|||+ |+++ ...|+|||.|-.-....... ...-..-|...-||||++...
T Consensus 349 QlLEav~hL~~--hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 349 QLLEAVTHLHK--HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHHHHH--ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999999 899999999999999 4444 56799999865332211111 111234577889999987543
Q ss_pred C-------CcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhcc
Q psy5603 362 I-------STKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVF 434 (455)
Q Consensus 362 ~-------~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~ 434 (455)
. ..|+|.|+.|.+.||+++...||........+.... .+..++. -++.++..+++|+...+..
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y-qe~qLPa---------lp~~vpp~~rqlV~~lL~r 496 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY-QESQLPA---------LPSRVPPVARQLVFDLLKR 496 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh-hhhhCCC---------CcccCChHHHHHHHHHhcC
Confidence 2 348999999999999999999999855332221111 1111111 1234555688889999999
Q ss_pred CcCCCCCHHHHHHHH
Q psy5603 435 EKDKRASMRDIVDLL 449 (455)
Q Consensus 435 dp~~RPs~~evl~~L 449 (455)
||++|++..=..+.|
T Consensus 497 ~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 497 DPSKRVSPNIAANVL 511 (598)
T ss_pred CccccCCccHHHhHH
Confidence 999999876554444
No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.77 E-value=3.2e-18 Score=156.95 Aligned_cols=137 Identities=20% Similarity=0.247 Sum_probs=106.0
Q ss_pred ccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc-CceeEE
Q psy5603 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN-NIMNCI 255 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~l 255 (455)
.||+|+||.||+|.+. |..|++|+........ ..-........+.+|++++..++|+++.....++. ....++
T Consensus 1 ~ig~G~~~~vy~~~~~-~~~~viK~~~~~~~~~-----~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~l 74 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFL-GLKAVIKERVPKSYRH-----PELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTI 74 (199)
T ss_pred CCCCCceEEEEEeecC-CccEEEEEecCCcCcC-----chHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEE
Confidence 3899999999999975 6899999965432111 00111223456889999999999887544433333 356689
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
||||++|++|.+.+.... . .++.+++.+|.+||+ .+++|||++|.||+++ ++.++++|||+++.
T Consensus 75 v~e~~~g~~l~~~~~~~~---~-------~~~~~i~~~l~~lH~--~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEGN---D-------ELLREIGRLVGKLHK--AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred EEEEECCccHHHHHhhcH---H-------HHHHHHHHHHHHHHH--CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999999999876421 1 789999999999999 8899999999999999 88999999998765
No 436
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76 E-value=5.7e-18 Score=178.38 Aligned_cols=141 Identities=21% Similarity=0.224 Sum_probs=110.0
Q ss_pred cCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-c
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-I 251 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~ 251 (455)
...+.||+|+||.||+|.+. +..+++|+...... .. ...........+.+|++++.+++|++++....++.+ .
T Consensus 336 ~~~~~iG~G~~g~Vy~~~~~-~~~~v~k~~~~~~~-~~----~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~ 409 (535)
T PRK09605 336 IPDHLIGKGAEADIKKGEYL-GRDAVIKERVPKGY-RH----PELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE 409 (535)
T ss_pred CccceeccCCcEEEEEEeec-CccceeEEEecccc-cc----hhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence 34589999999999999986 45566665432211 00 000112224568899999999999999887666555 6
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..++||||++|++|.+++. ....++.+++.+|.+||+ .+++||||||+|||+ .++.++|+|||+++
T Consensus 410 ~~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~--~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 410 EKTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHK--AGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CCEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHh--CCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 6789999999999999875 346789999999999999 889999999999999 67899999999987
Q ss_pred cc
Q psy5603 332 MS 333 (455)
Q Consensus 332 ~~ 333 (455)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 437
>KOG0606|consensus
Probab=99.74 E-value=3.3e-18 Score=181.12 Aligned_cols=202 Identities=24% Similarity=0.352 Sum_probs=138.7
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 254 (455)
+.|..|++|.||..+++. .+++|+ ++++... ...+ ++.....|.+|
T Consensus 89 klisngAygavylvrh~~trqrfa~-kiNkq~l-----------------ilRn---ilt~a~npfvv------------ 135 (1205)
T KOG0606|consen 89 KLISNGAYGAVYLVRHKETRQRFAM-KINKQNL-----------------ILRN---ILTFAGNPFVV------------ 135 (1205)
T ss_pred EeeccCCCCceeeeeccccccchhh-cccccch-----------------hhhc---cccccCCccee------------
Confidence 899999999999999874 678898 4432211 0111 23333334333
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
|+-.+.+.. .++++... +.+++|||+ .||+|||+||+|.+|..-|++|+.|||+++...
T Consensus 136 --------gDc~tllk~---~g~lPvdm--------vla~Eylh~--ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GL 194 (1205)
T KOG0606|consen 136 --------GDCATLLKN---IGPLPVDM--------VLAVEYLHS--YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGL 194 (1205)
T ss_pred --------chhhhhccc---CCCCcchh--------hHHhHhhcc--CCeecCCCCCCcceeeecccccccchhhhhhhh
Confidence 444555554 23344433 788999999 889999999999999999999999999987543
Q ss_pred cCCcc------------eeeeccCCCCCCCCCccc-ccCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcc
Q psy5603 335 TSNMK------------TMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQE 401 (455)
Q Consensus 335 ~~~~~------------~~~~~~~~gt~~Y~aPE~-~~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~ 401 (455)
..... ......++||+.|.|||+ +..+|...+|+|++|+|+||.+-|..||.+.......-......
T Consensus 195 ms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~ 274 (1205)
T KOG0606|consen 195 MSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD 274 (1205)
T ss_pred hhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhh
Confidence 22110 111235699999999995 56689999999999999999999999999987544333322221
Q ss_pred cchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC
Q psy5603 402 VPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 402 ~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
...++- |. ......++++.++|..+|..|-
T Consensus 275 i~wpE~-de--------a~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 275 IEWPEE-DE--------ALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred cccccc-Cc--------CCCHHHHHHHHHHHHhChHhhc
Confidence 111111 11 1233477888888999988883
No 438
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.69 E-value=1.9e-16 Score=149.42 Aligned_cols=147 Identities=18% Similarity=0.160 Sum_probs=107.1
Q ss_pred CccC-cCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccce--eeecccccC--
Q psy5603 176 NKLG-EGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL--LRLLGLCNN-- 250 (455)
Q Consensus 176 ~~LG-~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-- 250 (455)
..|| .||.|+||.+... +..++||.+........-..............+.+|+.++.++.|++| +..+++...
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5688 9999999999886 688999998643210000000000011224568899999999998875 556665322
Q ss_pred c---eeEEEEEeccC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 251 I---MNCIVYEYMCN-GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 251 ~---~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
. ..++|+|+++| .+|.+++.. .+++.. .+.+++.+|.+||+ .||+||||||+|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~--~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHD--AGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHH--CCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 699888764 235544 35789999999999 8899999999999999999999999
Q ss_pred ccccccc
Q psy5603 327 FGIVKMS 333 (455)
Q Consensus 327 FGla~~~ 333 (455)
||.++..
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9987754
No 439
>KOG1033|consensus
Probab=99.69 E-value=7.1e-18 Score=167.67 Aligned_cols=172 Identities=24% Similarity=0.340 Sum_probs=126.7
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..|+.|++|...+|.++|.+.......++...+.++.|++.|+.| ++.+|+|+||.||....+..+||+|||+..
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y-----k~~ihrdlkp~nif~~~d~q~kIgDFgl~t 404 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY-----KGLIHRDLKPSNIFFSDDDQLKIGDFGLVT 404 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh-----ccchhhhccccccccccchhhhhhhhhhee
Confidence 468999999999999999876666678899999999999999999 479999999999999999999999999977
Q ss_pred ccccCCc---ceeeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhh
Q psy5603 332 MSETSNM---KTMYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVRE 406 (455)
Q Consensus 332 ~~~~~~~---~~~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~ 406 (455)
....... .....+...||..||+||.+.| .++.++||||||++|+|+++ =..++.... .+.+
T Consensus 405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~-------------t~~d 471 (516)
T KOG1033|consen 405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA-------------TLTD 471 (516)
T ss_pred ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH-------------hhhh
Confidence 5544331 0112345689999999997664 78999999999999999997 222222111 0111
Q ss_pred ccchhccCCChh---HHHHHHHHHHHhhhccCcCCCCCHHHH
Q psy5603 407 VLDKEAGEWNET---HVETLISIVFEKCCVFEKDKRASMRDI 445 (455)
Q Consensus 407 ~~d~~~~~~~~~---~~~~~l~~Li~~~l~~dp~~RPs~~ev 445 (455)
+ +-+.+++. +.+. -..|+.+++...|.+||++.++
T Consensus 472 ~---r~g~ip~~~~~d~p~-e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 472 I---RDGIIPPEFLQDYPE-EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred h---hcCCCChHHhhcCcH-HHHHHHHhcCCCcccCchHHHH
Confidence 1 11112211 1111 2246889999999999955544
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.69 E-value=2.6e-16 Score=142.78 Aligned_cols=150 Identities=19% Similarity=0.218 Sum_probs=99.7
Q ss_pred CCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchh-----------hhhhhhHHHHHHHHHHHhhCCccc--e
Q psy5603 175 GNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNT-----------EAAMIPILLFENEVQTLSQCKHVN--L 241 (455)
Q Consensus 175 ~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~E~~~l~~l~h~n--i 241 (455)
++.||+|+||.||+|.+.+++.||||+++............. ............|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 478999999999999988789999999875432111110000 000001111245666666664432 3
Q ss_pred eeecccccCceeEEEEEeccCCCHHH-HHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 242 LRLLGLCNNIMNCIVYEYMCNGSLYD-RLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
.+.+++ ...++||||++|+++.. .+.... .. .....++.+++.++.++|.. .+|+||||||+||+++ ++
T Consensus 82 ~~~~~~---~~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh~~-~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL---NRHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLYRE-AGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec---CCCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHhhc-cCcCcCCCChhhEEEE-CC
Confidence 333332 34589999999965432 122110 11 66788999999999999973 4699999999999999 89
Q ss_pred ceEEeecccccccc
Q psy5603 321 VPKLGDFGIVKMSE 334 (455)
Q Consensus 321 ~~kl~DFGla~~~~ 334 (455)
.++|+|||.++...
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999986543
No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.66 E-value=9.7e-16 Score=132.75 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=109.0
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc--cceeeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH--VNLLRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~-~~ 252 (455)
+.||+|.++.||++...+ ..++||....... ...+.+|+.++..++| .++.+++++... +.
T Consensus 4 ~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---------------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~ 67 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---------------GADREREVAILQLLARKGLPVPKVLASGESDGW 67 (155)
T ss_pred eecccccccceEEEEecC-CeEEEEecCCCCc---------------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCc
Confidence 679999999999999874 7899999754321 1238889999999976 488888887765 67
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLS-KPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~-~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
.++++||+.|+++..+ +......++.+++.++.+||... .+++|||++|+||++++.+.++++|||.++
T Consensus 68 ~~~v~e~~~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~ 137 (155)
T cd05120 68 SYLLMEWIEGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAG 137 (155)
T ss_pred cEEEEEecCCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEeccccc
Confidence 8999999988877543 45677788999999999999852 469999999999999999999999999877
Q ss_pred cc
Q psy5603 332 MS 333 (455)
Q Consensus 332 ~~ 333 (455)
..
T Consensus 138 ~~ 139 (155)
T cd05120 138 YG 139 (155)
T ss_pred CC
Confidence 53
No 442
>KOG0590|consensus
Probab=99.64 E-value=3.2e-17 Score=172.86 Aligned_cols=253 Identities=21% Similarity=0.285 Sum_probs=180.0
Q ss_pred cCCCccCcCCCeEEEEEEEcC--CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeeccccc
Q psy5603 173 RRGNKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCN 249 (455)
Q Consensus 173 ~~~~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 249 (455)
++.+.||+|+|+.|-...... ...+|+|.+..... .. . .......|..+-+.+. |+|++.+++...
T Consensus 23 ~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~-~~---~-------~~~~i~~e~~~~~~~s~h~n~~~~~~~~~ 91 (601)
T KOG0590|consen 23 KLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPK-SE---D-------SSEHIDTETDIQKKLSKHSNTVHMIEPSS 91 (601)
T ss_pred cccccccccccchhhhhhhcCCCcceeeccCCCCCCC-cc---c-------hhhhcCccccccccccccccccccCCccC
Confidence 444679999999998877532 34567776654331 00 0 0222445777777776 999999999887
Q ss_pred C-ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH-cCCCCeeecCCCCCcEEEcCCC-ceEEee
Q psy5603 250 N-IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLH-SLSKPIIHRDVKSANVLLDENF-VPKLGD 326 (455)
Q Consensus 250 ~-~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH-~~~~~iiH~Dikp~NILl~~~~-~~kl~D 326 (455)
+ ...+++.+|..|+++.+.+... .....+....-.++.|+..++.|+| . .++.|+||||+|.+++..+ ..+++|
T Consensus 92 ~~~~~~~~~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~--~~~~h~~ikP~n~~l~~s~~~l~~~d 168 (601)
T KOG0590|consen 92 SPRSYLLSLSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPE--NGVTHRDIKPSNSLLDESGSALKIAD 168 (601)
T ss_pred CCcccccccCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcc--cccccCCCCCccchhccCCCcccCCC
Confidence 7 7888999999999999988321 1224566677789999999999999 7 7899999999999999999 999999
Q ss_pred cccccccccCCcceeeeccCCC-CCCCCCcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccc
Q psy5603 327 FGIVKMSETSNMKTMYTENLTG-TRPYMPPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVP 403 (455)
Q Consensus 327 FGla~~~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~ 403 (455)
||+|................+| ++.|+|||.+.+ ...+..|+||.|+++.-+++|..|++........+....+..
T Consensus 169 f~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~- 247 (601)
T KOG0590|consen 169 FGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK- 247 (601)
T ss_pred chhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc-
Confidence 9999877662222233345678 999999997766 346788999999999999999999987653221111110000
Q ss_pred hhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHH
Q psy5603 404 VREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIV 446 (455)
Q Consensus 404 ~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl 446 (455)
......+.........+++.+++..+|..|.+..++.
T Consensus 248 ------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 248 ------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ------cccccCccccCChhhhhcccccccCCchhcccccccc
Confidence 0001111223333455667788888899999887763
No 443
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.58 E-value=2.1e-14 Score=146.97 Aligned_cols=152 Identities=20% Similarity=0.183 Sum_probs=101.8
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCC--------------------C-Cchh------hhhhhhHHHHHH
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSS--------------------N-SDNT------EAAMIPILLFEN 228 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~--------------------~-~~~~------~~~~~~~~~~~~ 228 (455)
+.||+|++|.||+|++++|+.||||+.++.....-. . .+.. .........|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 469999999999999999999999998754211000 0 0000 000001123566
Q ss_pred HHHHHhhCC----ccceeeecccccC--ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHH-HHHHHHcCC
Q psy5603 229 EVQTLSQCK----HVNLLRLLGLCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE-ALHYLHSLS 301 (455)
Q Consensus 229 E~~~l~~l~----h~niv~l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~-gl~~LH~~~ 301 (455)
|...+.+++ |.+-+.+-..+.+ ...++||||++|++|.+....... .. .+..++..++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~-- 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLR-- 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHh--
Confidence 666666652 3333333333322 456899999999999887654211 12 23456666666 4678898
Q ss_pred CCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
.|++|+|+||.||++++++.++++|||++....
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 789999999999999999999999999987654
No 444
>KOG1266|consensus
Probab=99.45 E-value=2.1e-13 Score=128.36 Aligned_cols=202 Identities=20% Similarity=0.247 Sum_probs=139.1
Q ss_pred HHHhhCCccceeeecccccCc------eeEEEEEeccCCCHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCC
Q psy5603 231 QTLSQCKHVNLLRLLGLCNNI------MNCIVYEYMCNGSLYDRLARVNN-TPPLDSNKRYSIALGVAEALHYLHSLSKP 303 (455)
Q Consensus 231 ~~l~~l~h~niv~l~~~~~~~------~~~lV~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH~~~~~ 303 (455)
.-|-++.|.|||++..|+.+. ...++.|||..|+|.++|++... ...+......+|+.||+.||.|||+...+
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Pp 198 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCc
Confidence 345567899999999988652 34789999999999999987543 45678888899999999999999999889
Q ss_pred eeecCCCCCcEEEcCCCceEEeecccccccc-cCCcceeeeccCCCCCCCCCcccc-cCCCCcccchHHHHHHHHHHHcC
Q psy5603 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMSE-TSNMKTMYTENLTGTRPYMPPEAM-HCQISTKTDVFSYGVILLELLTG 381 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~~-~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~sDv~SlGvvl~elltG 381 (455)
|+|+++..+-|++..+|-+||+----..... ........++...|.++|.+||.= ..+.+.++|||+||...+||.-|
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 9999999999999999999985311100000 000011122344677889999953 34567799999999999999887
Q ss_pred CCCCCCC-cchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 382 MKPIDDN-NTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 382 ~~p~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
..--... ........+...-..+..-+ -+.++.+|+...|+.||+|.+++-
T Consensus 279 Eiq~tnseS~~~~ee~ia~~i~~len~l---------------qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 279 EIQSTNSESKVEVEENIANVIIGLENGL---------------QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eeccCCCcceeehhhhhhhheeeccCcc---------------ccCcCcccccCCCCCCcchhhhhc
Confidence 6543222 12221111111100111111 123478999999999999998753
No 445
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.45 E-value=3.9e-13 Score=119.71 Aligned_cols=128 Identities=20% Similarity=0.209 Sum_probs=95.1
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccCceeEE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNNIMNCI 255 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~l 255 (455)
+.|+.|.++.||+++.. +..|++|........ ...+..|+.++..+.+.++++-+-.+.....++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~--------------~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~l 68 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL--------------LINRENEAENSKLAAEAGIGPKLYYFDPETGVL 68 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCccc--------------ccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeE
Confidence 56899999999999986 788999997543210 112678899998887666554332233344589
Q ss_pred EEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-----eeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 256 VYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKP-----IIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 256 V~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~-----iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
||||++|.++.+. . . ....++.+++++|..||+ .+ ++|||++|.||+++ ++.++++|||.+
T Consensus 69 v~e~i~G~~l~~~--~------~---~~~~~~~~l~~~l~~LH~--~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a 134 (170)
T cd05151 69 ITEFIEGSELLTE--D------F---SDPENLEKIAKLLKKLHS--SPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYA 134 (170)
T ss_pred EEEecCCCccccc--c------c---cCHHHHHHHHHHHHHHhC--CCCCCceeecCCCCcCcEEEE-CCeEEEEecccc
Confidence 9999999888643 0 1 112456789999999999 44 59999999999999 678999999987
Q ss_pred cc
Q psy5603 331 KM 332 (455)
Q Consensus 331 ~~ 332 (455)
..
T Consensus 135 ~~ 136 (170)
T cd05151 135 GM 136 (170)
T ss_pred cC
Confidence 64
No 446
>KOG0601|consensus
Probab=99.43 E-value=2.7e-13 Score=137.62 Aligned_cols=246 Identities=20% Similarity=0.191 Sum_probs=172.4
Q ss_pred CccCc--CCCeEEEEEEE--c-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeeccccc
Q psy5603 176 NKLGE--GQFGTVYYGKL--K-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLCN 249 (455)
Q Consensus 176 ~~LG~--G~fg~Vy~~~~--~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 249 (455)
..+|. |.+|.||.+.. . ++..+|+|+-+........ ...-.+|+..-+++ .|+|.++.+..+.
T Consensus 120 ~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-----------~~~k~~~~~s~~~i~~~~~~v~~~~~~e 188 (524)
T KOG0601|consen 120 SRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-----------SKRKLREFLSHHKIDSHENPVRDSPAWE 188 (524)
T ss_pred cccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-----------cccccchhhcccccCccccccccCcccc
Confidence 67999 99999999987 3 4788999985433221111 11134566666666 4899999888887
Q ss_pred CceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHH----HHHHHHcCCCCeeecCCCCCcEEEcCC-CceEE
Q psy5603 250 NIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAE----ALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKL 324 (455)
Q Consensus 250 ~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~----gl~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl 324 (455)
+....+++..+++.+|..+..... ..++....+.+..+... |+.++|+ .+++|-|+||+||+...+ ...++
T Consensus 189 ~~~~lfiqtE~~~~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs--~~~~~~~~kp~~i~~~~~~~s~~~ 264 (524)
T KOG0601|consen 189 GSGILFIQTELCGESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHS--NNIVHDDLKPANIFTTSDWTSCKL 264 (524)
T ss_pred cCCcceeeeccccchhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCC--Ccccccccchhheecccccceeec
Confidence 754444555555889988877643 34777888888888888 9999999 889999999999999999 89999
Q ss_pred eecccccccccCCcceee--eccCCCCCCCCCcccccCCCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhccc
Q psy5603 325 GDFGIVKMSETSNMKTMY--TENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEV 402 (455)
Q Consensus 325 ~DFGla~~~~~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~ 402 (455)
+|||+............. .-...|...|++||...+-++..+|+||+|.|..+..+|..+........+..... ..
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~-~~- 342 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ-GY- 342 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc-cc-
Confidence 999998877765532211 12336778899999999999999999999999999999887765442111111100 00
Q ss_pred chhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHH
Q psy5603 403 PVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVD 447 (455)
Q Consensus 403 ~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~ 447 (455)
...++.+.. ...+...+.+++..+|..|++...+..
T Consensus 343 ip~e~~~~~---------s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 343 IPLEFCEGG---------SSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred CchhhhcCc---------chhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 001111111 111333588899999999998876643
No 447
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.43 E-value=4.8e-13 Score=138.80 Aligned_cols=151 Identities=20% Similarity=0.208 Sum_probs=93.6
Q ss_pred CccCcCCCeEEEEEEEcC-CcEEEEEEeecccCc--------------------CCCCC-c------hhhhhhhhHHHHH
Q psy5603 176 NKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANY--------------------SSSNS-D------NTEAAMIPILLFE 227 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~--------------------~~~~~-~------~~~~~~~~~~~~~ 227 (455)
+.||+|++|.||+|++++ |+.||||+.++.... ..... + +..........|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 469999999999999987 999999999865210 00000 0 0000011112355
Q ss_pred HHHHHHhhCC----ccceeeecccccC--ceeEEEEEeccCCCHHHH--HhhcCC-CCCCCHHHHHHHHHHHHHHHHHHH
Q psy5603 228 NEVQTLSQCK----HVNLLRLLGLCNN--IMNCIVYEYMCNGSLYDR--LARVNN-TPPLDSNKRYSIALGVAEALHYLH 298 (455)
Q Consensus 228 ~E~~~l~~l~----h~niv~l~~~~~~--~~~~lV~e~~~~gsL~~~--l~~~~~-~~~l~~~~~~~i~~~i~~gl~~LH 298 (455)
+|...+.+++ +.+.+.+-..+.+ ...++||||+.|+++.+. +...+. ...+....+..++.|+ .
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-------f 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-------F 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-------H
Confidence 5555555542 4444443333332 456899999999999874 222110 0123333333334443 3
Q ss_pred cCCCCeeecCCCCCcEEEcCCC----ceEEeeccccccccc
Q psy5603 299 SLSKPIIHRDVKSANVLLDENF----VPKLGDFGIVKMSET 335 (455)
Q Consensus 299 ~~~~~iiH~Dikp~NILl~~~~----~~kl~DFGla~~~~~ 335 (455)
. .|++|+|+||.||+++.+| .++++|||++.....
T Consensus 278 ~--~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 R--DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred h--CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 4 6899999999999999888 999999999876543
No 448
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.35 E-value=1.5e-11 Score=111.61 Aligned_cols=148 Identities=14% Similarity=0.181 Sum_probs=100.3
Q ss_pred CccCcCCCeEEEEEEEcC-------CcEEEEEEeecccCcCCCCCc----hhh-----hhhhhHHHH----HHHHHHHhh
Q psy5603 176 NKLGEGQFGTVYYGKLKN-------GMEIAVKTLENNANYSSSNSD----NTE-----AAMIPILLF----ENEVQTLSQ 235 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~----~~~-----~~~~~~~~~----~~E~~~l~~ 235 (455)
..||.|--+.||.|...+ +..+|||+.+.....-..... +.. ........+ .+|...|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999997542 478999998754321100000 000 001112233 389999999
Q ss_pred CCc--cceeeecccccCceeEEEEEeccCCCHHH-HHhhcCCCCCCCHHHHHHHHHHHHHHHHHH-HcCCCCeeecCCCC
Q psy5603 236 CKH--VNLLRLLGLCNNIMNCIVYEYMCNGSLYD-RLARVNNTPPLDSNKRYSIALGVAEALHYL-HSLSKPIIHRDVKS 311 (455)
Q Consensus 236 l~h--~niv~l~~~~~~~~~~lV~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~i~~gl~~L-H~~~~~iiH~Dikp 311 (455)
+.. -++...+.+ ...++||||+.+..+.. .+.. ..++..+...+..+++.+|..| |+ .|+|||||++
T Consensus 83 l~~~Gv~vP~pi~~---~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H~--~glVHGDLs~ 153 (197)
T cd05146 83 MQKAGIPCPEVVVL---KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYKE--CNLVHADLSE 153 (197)
T ss_pred HHHcCCCCCeEEEe---cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHHh--CCeecCCCCH
Confidence 854 344444443 45689999997654422 2322 2355566778889999999998 88 7899999999
Q ss_pred CcEEEcCCCceEEeeccccccc
Q psy5603 312 ANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 312 ~NILl~~~~~~kl~DFGla~~~ 333 (455)
.|||++ ++.+.|+|||.+...
T Consensus 154 ~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 154 YNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred HHEEEE-CCcEEEEECCCceeC
Confidence 999997 468999999977644
No 449
>cd08781 Death_UNC5-like Death domain found in Uncoordinated-5 homolog family. Death Domain (DD) found in Uncoordinated-5 (UNC-5) homolog family, which includes Unc5A, B, C and D in vertebrates. UNC5 proteins are receptors for secreted netrins (netrin-1, -3 and -4) that are involved in diverse processes like axonal guidance, neuronal migration, blood vessel patterning, and apoptosis. They are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit
Probab=99.33 E-value=3.5e-12 Score=98.88 Aligned_cols=78 Identities=22% Similarity=0.377 Sum_probs=66.9
Q ss_pred cCHHHHHHhhhhcCCc----chHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCC
Q psy5603 16 LKQYVVHELGIILNER----DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~~----~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
||++++++||.+||+. ++|+.+|..+.-+ ..|+.|+ .+.|||..||+.|.+++..++|
T Consensus 1 lp~~~r~~Lc~~LD~~~~~g~dWr~LA~~Lgl~-----------~~i~~~~-------~~~SPT~~LL~~We~~~~~~~t 62 (83)
T cd08781 1 LPYSIRQKLCSSLDPPNPRGNDWRLLAKKLSVD-----------RYLNYFA-------TKPSPTGVILDLWEARHRDDGA 62 (83)
T ss_pred CCHHHHHHHHHHcCCCCCCCCCHHHHHHHhCcH-----------HHHHHHc-------CCCChHHHHHHHHHhcCCCcch
Confidence 7999999999999986 7999999997622 2455555 4789999999999988777899
Q ss_pred HHHHHHHHHhcccccccccc
Q psy5603 92 LSDLIMFLKKAELHQAARYV 111 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~~~~ 111 (455)
|++|+.+|.+.+...|++++
T Consensus 63 v~~L~~~L~~mgr~da~~ll 82 (83)
T cd08781 63 LNDLAQILEEMGRTDAVNLL 82 (83)
T ss_pred HHHHHHHHHHcCcHHHHHHh
Confidence 99999999999998888654
No 450
>KOG3087|consensus
Probab=99.28 E-value=6.4e-11 Score=103.73 Aligned_cols=150 Identities=19% Similarity=0.247 Sum_probs=110.0
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
..|-+|+-+.|+++.+. |+...||.-..+. .....-.......+-.+|.+.+.+|+--.|.-..=++.+ ...+
T Consensus 13 ~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~-----YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~ 86 (229)
T KOG3087|consen 13 ELIKQGAEARVPRGSFS-GEAAIIKERFSKR-----YRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQ 86 (229)
T ss_pred eeeeccceeeEeeeccC-CceeEEeeccccc-----ccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCe
Confidence 67999999999999997 7888888654322 112233345567778899999999976555333233333 6678
Q ss_pred EEEEeccC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC---ceEEeecccc
Q psy5603 255 IVYEYMCN-GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIV 330 (455)
Q Consensus 255 lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla 330 (455)
++|||++| .++.+++...... +........++..|-+.+.-||. .++|||||..+||+|..++ .+.++|||++
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~-~~~d~~~~~~~~~iG~~igklH~--ndiiHGDLTTSNill~~~~~~~~~~lIdfgls 163 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMED-ESEDEGLAELARRIGELIGKLHD--NDIIHGDLTTSNILLRSDGNQITPILIDFGLS 163 (229)
T ss_pred EEEEeccchhHHHHHHHHHccC-cccchhHHHHHHHHHHHHHHhhh--CCeecccccccceEEecCCCcCceEEEeecch
Confidence 99999977 3778888765432 23333337889999999999999 7899999999999996554 4589999998
Q ss_pred cccc
Q psy5603 331 KMSE 334 (455)
Q Consensus 331 ~~~~ 334 (455)
..+.
T Consensus 164 ~~s~ 167 (229)
T KOG3087|consen 164 SVSR 167 (229)
T ss_pred hccc
Confidence 7654
No 451
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.27 E-value=3e-10 Score=110.80 Aligned_cols=255 Identities=16% Similarity=0.146 Sum_probs=163.4
Q ss_pred CCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceee--------e
Q psy5603 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLR--------L 244 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~--------l 244 (455)
.+..||+|+-+.+|..--- +.. +-|+++....- . -.+-+..|.+. .||-+-. +
T Consensus 15 ~gr~LgqGgea~ly~l~e~-~d~-VAKIYh~Pppa---------------~-~aqk~a~la~~p~~p~~~~rvaWPqa~L 76 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV-RDQ-VAKIYHAPPPA---------------A-QAQKVAELAATPDAPLLNYRVAWPQATL 76 (637)
T ss_pred CCccccCCccceeeecchh-hch-hheeecCCCch---------------H-HHHHHHHhccCCCCcchhhhhcccHHHh
Confidence 3578999999999964321 223 44777643220 0 11122233333 4553322 2
Q ss_pred cccccCceeEEEEEeccCC-CHHHHHh---hcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 245 LGLCNNIMNCIVYEYMCNG-SLYDRLA---RVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 245 ~~~~~~~~~~lV~e~~~~g-sL~~~l~---~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+|--.....-++|+.++|. ...+++. +....+...|...++.+..++.+.+-||. +|.+-||++++|+|+++++
T Consensus 77 ~G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~--~Gh~vGDVn~~~~lVsd~~ 154 (637)
T COG4248 77 HGGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE--HGHVVGDVNQNSFLVSDDS 154 (637)
T ss_pred hCCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh--cCCcccccCccceeeecCc
Confidence 2222223356788888765 2333332 22335778999999999999999999999 8899999999999999999
Q ss_pred ceEEeecccccccccCCcceeeeccCCCCCCCCCccccc-C-----CCCcccchHHHHHHHHHHHcC-CCCCCCCcch--
Q psy5603 321 VPKLGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMH-C-----QISTKTDVFSYGVILLELLTG-MKPIDDNNTI-- 391 (455)
Q Consensus 321 ~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~-----~~~~~sDv~SlGvvl~elltG-~~p~~~~~~~-- 391 (455)
.+.|.|-......... ......+|.+.|.+||.-+ + .-+..+|-|.|||+++++|.| ++||.+.-..
T Consensus 155 ~V~LVdsDsfqi~~ng----~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ 230 (637)
T COG4248 155 KVVLVDSDSFQINANG----TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISD 230 (637)
T ss_pred eEEEEcccceeeccCC----ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCC
Confidence 9999985433322111 1234568999999999543 2 246789999999999999985 9999875311
Q ss_pred ---hhHHHhhhccc----chhhccchhccCCChhHHHHHHHHHHHhhhccC--cCCCCCHHHHHHHHHhh
Q psy5603 392 ---LYYYLVVEQEV----PVREVLDKEAGEWNETHVETLISIVFEKCCVFE--KDKRASMRDIVDLLSKS 452 (455)
Q Consensus 392 ---~~~~~~~~~~~----~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~d--p~~RPs~~evl~~L~~~ 452 (455)
.....+..... .-..-..+-.+.|+-.-.+..++.|+.+|+... +.-||+.+.++..|..+
T Consensus 231 ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 231 APNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred CCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 00001110000 001111223355666667777888888999887 77899999988877654
No 452
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.26 E-value=5.9e-11 Score=110.17 Aligned_cols=142 Identities=24% Similarity=0.326 Sum_probs=107.4
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCcc--ceeeecccccC---
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV--NLLRLLGLCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--niv~l~~~~~~--- 250 (455)
+.||.|.++.||+++..+|..+++|......... ....+.+|++++..+++. ++.+++.+...
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~------------~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~ 71 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLP------------SAHDVAREYRVLRALAGTGVPVPKVLALCEDPSV 71 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCc------------ccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCc
Confidence 5689999999999998766899999975432210 023378899999998763 45666776655
Q ss_pred -ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-----------------------------
Q psy5603 251 -IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL----------------------------- 300 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~----------------------------- 300 (455)
+..++||||++|.++.+.+.. ..++..++..++.+++.+|..||+.
T Consensus 72 ~~~~~~v~e~i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (223)
T cd05154 72 LGTPFYVMERVDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYD 147 (223)
T ss_pred cCCceEEEEEeCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHH
Confidence 256899999999988775431 2467778888888888888888852
Q ss_pred -------------------------CCCeeecCCCCCcEEEcC--CCceEEeeccccccc
Q psy5603 301 -------------------------SKPIIHRDVKSANVLLDE--NFVPKLGDFGIVKMS 333 (455)
Q Consensus 301 -------------------------~~~iiH~Dikp~NILl~~--~~~~kl~DFGla~~~ 333 (455)
...++|||++|.||+++. ++.+.|+||+.+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 148 ASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred hhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 134799999999999998 677899999977643
No 453
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=1.3e-10 Score=102.29 Aligned_cols=140 Identities=20% Similarity=0.254 Sum_probs=101.4
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeE
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNC 254 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 254 (455)
..+++|+-+.+|.+.+. |.++++|.-- ...+.. ..-+......+-.+|..++.+++--.|.-.+=|..+ ....
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri-~K~YR~----p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~ 75 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERI-PKRYRH----PELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGL 75 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeec-CcccCC----hHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCE
Confidence 45899999999999886 4566666533 222222 222334445667789999998865444332223333 5557
Q ss_pred EEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q psy5603 255 IVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSE 334 (455)
Q Consensus 255 lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~ 334 (455)
++|||.+|..|.+.+... ...++..+-.-+.-||. .||+||||.++||++...+ +.++|||++.+..
T Consensus 76 I~me~I~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~--~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 76 IVMEYIEGELLKDALEEA----------RPDLLREVGRLVGKLHK--AGIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred EEEEEeCChhHHHHHHhc----------chHHHHHHHHHHHHHHh--cCeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 999999999999988862 25667778888899999 7899999999999998765 9999999987543
No 454
>cd08783 Death_MALT1 Death domain similar to that found in Mucosa-associated lymphoid tissue-lymphoma-translocation gene 1. Death domain (DD) similar to that found in Malt1 (mucosa-associated lymphoid tissue-lymphoma-translocation gene 1). Malt1, together with Bcl10 (B-cell lymphoma 10), are the integral components of the CBM signalosome. They associate with CARD9 to form M-CBM (CBM complex in myeloid immune cells) and with CARMA1 to form L-CBM (CBM complex in lymphoid immune cells), to mediate activation of NF-kB and MAPK by ITAM-coupled receptors expressed on immune cells. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins
Probab=99.23 E-value=3.1e-11 Score=92.41 Aligned_cols=91 Identities=18% Similarity=0.280 Sum_probs=76.5
Q ss_pred eecCHHHHHHhhhhcCCc---chHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCC
Q psy5603 14 RHLKQYVVHELGIILNER---DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRP 90 (455)
Q Consensus 14 ~~l~~~~~~~l~~~ld~~---~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~ 90 (455)
-.|+..++++||.+||.. -+|+++|..+-.. ..| |++..++.+|--.+-- +|.|||..||+.|+.+ ++
T Consensus 2 ~~L~e~~l~~L~~lLD~~~~~~gWr~LAe~lg~~--~~f--r~S~~el~~cslkvl~--p~gSPsk~LL~~~~~r---g~ 72 (97)
T cd08783 2 NRLREPLLRRLSELLDRAADGKGWRKLAELAGSR--GRF--RLSCLDLEQCSLKVLE--PEGSPSRSLLKLLGER---GC 72 (97)
T ss_pred CcccHHHHHHHHHHHhCCCccCCHHHHHHHHccC--Ccc--ccCHHHHHHHHHHHhc--CCCCchHHHHHHHHHc---CC
Confidence 458889999999999975 6899999998754 233 7899999666444332 8999999999999998 89
Q ss_pred CHHHHHHHHHhcccccccccccc
Q psy5603 91 RLSDLIMFLKKAELHQAARYVEV 113 (455)
Q Consensus 91 ~~~~l~~~l~~~~l~~~~~~~~~ 113 (455)
||.+|+++|....+.+|.+++.+
T Consensus 73 Tv~~Ll~~L~~Mgh~eAl~lL~~ 95 (97)
T cd08783 73 TVTELSEFLQAMEHTEALQLLSP 95 (97)
T ss_pred cHHHHHHHHHHhhhHHHHHHhcC
Confidence 99999999999999999987653
No 455
>KOG0606|consensus
Probab=99.19 E-value=1.3e-11 Score=131.69 Aligned_cols=246 Identities=18% Similarity=0.207 Sum_probs=163.1
Q ss_pred CCCccCcCCCeEEEEEEEcC-CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccc-cCc
Q psy5603 174 RGNKLGEGQFGTVYYGKLKN-GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLC-NNI 251 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~-~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~ 251 (455)
+.+-+-+|.||.++.+.-.. |...++|............ ......+-.++-..++|-++...--+ ...
T Consensus 808 i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~----------~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs 877 (1205)
T KOG0606|consen 808 ITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTND----------YESIRSKSNILITPRSPAVVRSFPSFPCRS 877 (1205)
T ss_pred ecccccCCCCcccccCCccccccccchhhhccchhhcccc----------ccccCCccCccccCCCCceecccCCCCCCC
Confidence 44678899999999876442 4444555543222111000 01111222222223456666544432 336
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~ 331 (455)
..+||++|+.|++|...|+.. ++.+.......+..+..++++||. ..++|+|++|.|+|...+|..++.|||...
T Consensus 878 P~~L~~~~~~~~~~~Skl~~~---~~~saepaRs~i~~~vqs~e~L~s--~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~ 952 (1205)
T KOG0606|consen 878 PLPLVGHYLNGGDLPSKLHNS---GCLSAEPARSPILERVQSLESLHS--SLRKHRDLKPDSLLIAYDGHRPLTDFGTLS 952 (1205)
T ss_pred CcchhhHHhccCCchhhhhcC---CCcccccccchhHHHHhhhhcccc--chhhcccccccchhhcccCCcccCcccccc
Confidence 678999999999999999873 456777777788889999999999 669999999999999999999999998433
Q ss_pred ccccC---------------------Ccc-e------eeeccCCCCCCCCCcccccC-CCCcccchHHHHHHHHHHHcCC
Q psy5603 332 MSETS---------------------NMK-T------MYTENLTGTRPYMPPEAMHC-QISTKTDVFSYGVILLELLTGM 382 (455)
Q Consensus 332 ~~~~~---------------------~~~-~------~~~~~~~gt~~Y~aPE~~~~-~~~~~sDv~SlGvvl~elltG~ 382 (455)
..+.. ... . .....+.||+.|++||...+ .....+|+|++|++++|.++|.
T Consensus 953 ~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~ 1032 (1205)
T KOG0606|consen 953 KVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGI 1032 (1205)
T ss_pred ccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCC
Confidence 22110 000 0 00123579999999996544 5688899999999999999999
Q ss_pred CCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHH
Q psy5603 383 KPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMR 443 (455)
Q Consensus 383 ~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~ 443 (455)
+||...........+.....+.+ ..+.......++++...+..+|.+|-.+.
T Consensus 1033 pp~na~tpq~~f~ni~~~~~~~p---------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1033 PPFNAETPQQIFENILNRDIPWP---------EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCCcchhhhhhccccCCCCCC---------CCccccChhhhhhhhhhhccCchhccCcc
Confidence 99998775544433332222211 11233444577788888889999887665
No 456
>KOG1243|consensus
Probab=99.17 E-value=4e-10 Score=115.90 Aligned_cols=167 Identities=22% Similarity=0.279 Sum_probs=121.9
Q ss_pred EEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeecccccC-ceeEEEEEeccCCCHH
Q psy5603 189 GKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCNN-IMNCIVYEYMCNGSLY 266 (455)
Q Consensus 189 ~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~lV~e~~~~gsL~ 266 (455)
|..+ ++.+|.|...+.... . ......+-++.|+.++||||++++..... +..|+|.|-+ ..|.
T Consensus 31 ~t~k~~~~~vsVF~~~~~~~------~-------~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~ 95 (690)
T KOG1243|consen 31 GTRKADGGPVSVFVYKRSNG------E-------VTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLE 95 (690)
T ss_pred cceeccCCceEEEEEeCCCc------h-------hhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHH
Confidence 4433 478898888864322 0 12336677889999999999999997766 8899999988 5677
Q ss_pred HHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcceeeeccC
Q psy5603 267 DRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKTMYTENL 346 (455)
Q Consensus 267 ~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~ 346 (455)
.++.. +....+..-+.||+.||.|||.- .+++|++|.-+.|+++..|..||++|-++......... ....
T Consensus 96 ~~lk~------l~~~~v~~Gl~qIl~AL~FL~~d-~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~---~~~~ 165 (690)
T KOG1243|consen 96 TVLKE------LGKEEVCLGLFQILAALSFLNDD-CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAP---AKSL 165 (690)
T ss_pred HHHHH------hHHHHHHHHHHHHHHHHHHHhcc-CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcc---cccc
Confidence 77776 34667777899999999999863 57999999999999999999999999887654332210 0001
Q ss_pred CCCCCCCCcccccCCCCcccchHHHHHHHHHHHcC
Q psy5603 347 TGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTG 381 (455)
Q Consensus 347 ~gt~~Y~aPE~~~~~~~~~sDv~SlGvvl~elltG 381 (455)
.---.|..|+... .-....|.|-|||+++|++.|
T Consensus 166 ~~~~s~~~P~~~~-~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 166 YLIESFDDPEEID-PSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hhhhcccChhhcC-ccccchhhhhHHHHHHHHhCc
Confidence 1111255555431 111356999999999999999
No 457
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.10 E-value=9.3e-10 Score=99.41 Aligned_cols=139 Identities=21% Similarity=0.205 Sum_probs=86.5
Q ss_pred EEEEEEEcCCcEEEEEEeecccCcC----------CCCC---chhhhhhhhHHHHHHHHHHHhhCCccc--eeeeccccc
Q psy5603 185 TVYYGKLKNGMEIAVKTLENNANYS----------SSNS---DNTEAAMIPILLFENEVQTLSQCKHVN--LLRLLGLCN 249 (455)
Q Consensus 185 ~Vy~~~~~~~~~vAvK~~~~~~~~~----------~~~~---~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~ 249 (455)
.||.|...+|..+|||..+.....- .... ..............+|.+.|.++..-+ +.+.+.+
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899998888999999987542110 0000 001112333456788999999997653 4445443
Q ss_pred CceeEEEEEecc--CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHH-HHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 250 NIMNCIVYEYMC--NGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHY-LHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 250 ~~~~~lV~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~-LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
...++||||+. |..+..+... .++......++.+++..+.. +|+ .|++|||+.+.|||++++ .+.|+|
T Consensus 79 -~~~~ivME~I~~~G~~~~~l~~~-----~~~~~~~~~~~~~il~~~~~~~~~--~givHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 -NRNVIVMEYIGEDGVPLPRLKDV-----DLSPEEPKELLEEILEEIIKMLHK--AGIVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp -ETTEEEEE--EETTEEGGCHHHC-----GGGGSTHHHHHHHHHHHHHHHHHC--TTEEESS-STTSEEEETT-CEEE--
T ss_pred -eCCEEEEEecCCCccchhhHHhc-----cccchhHHHHHHHHHHHHHHHHHh--cCceecCCChhhEEeecc-eEEEEe
Confidence 34589999998 6555443332 12234456677888885555 578 789999999999999988 999999
Q ss_pred cccccccc
Q psy5603 327 FGIVKMSE 334 (455)
Q Consensus 327 FGla~~~~ 334 (455)
||.+....
T Consensus 150 f~qav~~~ 157 (188)
T PF01163_consen 150 FGQAVDSS 157 (188)
T ss_dssp GTTEEETT
T ss_pred cCcceecC
Confidence 99876544
No 458
>cd08782 Death_DAPK1 Death domain found in death-associated protein kinase 1. Death domain (DD) found in death-associated protein kinase 1 (DAPK1). DAPK1 is composed of several functional domains, including a kinase domain, a CaM regulatory domain, ankyrin repeats, a cytoskeletal binding domain and a C-terminal DD. It plays important roles in a diverse range of signal transduction pathways including apoptosis, growth factor signalling, and autophagy. Loss of DAPK1 expression, usually because of DNA methylation, is implicated in many tumor types. DAPK1 is highly abundant in the brain and has also been associated with neurodegeneration. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as ad
Probab=99.07 E-value=3.2e-10 Score=87.32 Aligned_cols=76 Identities=21% Similarity=0.298 Sum_probs=59.6
Q ss_pred HHHHhhhhcCCcc----hHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHH
Q psy5603 20 VVHELGIILNERD----DWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDL 95 (455)
Q Consensus 20 ~~~~l~~~ld~~~----~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l 95 (455)
++++||.+|||.+ +|+.+|..+--. ... ..++...+ +|.|||+.||+.|++++ .+||++|
T Consensus 2 ~R~~L~~lLdpp~~~g~DW~~LA~~Lg~~----------~~~-~~~~~~~~---~~~sPT~~LL~~W~~~~--~~tvg~L 65 (82)
T cd08782 2 TRRKLSRLLDPPDPMGRDWCLLAVNLGLT----------DLV-PQLDTNSS---SLPSPTDALLQEWATAP--PSTIGTL 65 (82)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHcCCh----------hhH-HHHHhcCC---CCCCcHHHHHHHHhcCC--cccHHHH
Confidence 6899999999976 999999997632 223 33333323 47999999999999983 3999999
Q ss_pred HHHHHhcccccccccc
Q psy5603 96 IMFLKKAELHQAARYV 111 (455)
Q Consensus 96 ~~~l~~~~l~~~~~~~ 111 (455)
+++|.+.+...+++++
T Consensus 66 ~~~L~~~gR~Da~~~l 81 (82)
T cd08782 66 IDKLRELGREDAADVL 81 (82)
T ss_pred HHHHHHcCcHHHHHHh
Confidence 9999999887777643
No 459
>KOG0601|consensus
Probab=99.03 E-value=2.5e-10 Score=116.25 Aligned_cols=236 Identities=22% Similarity=0.263 Sum_probs=159.0
Q ss_pred CccCcCCCeEEEEEEEc--CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhC-Cccceeeecccc-cCc
Q psy5603 176 NKLGEGQFGTVYYGKLK--NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQC-KHVNLLRLLGLC-NNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~-~~~ 251 (455)
..||.|.|+.||....+ ++..|++|.+......... ...-..|+.+...+ -|.+++..+..+ ...
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~-----------di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r 339 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFAS-----------DIFSLGEVILEAILGSHLPSVGKNSSWSQLR 339 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhccccchHh-----------hhcchhhhhHhhHhhcccccCCCCCCccccc
Confidence 88999999999988744 4788999988654332111 11134566666655 578888877644 447
Q ss_pred eeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCC-CceEEeecccc
Q psy5603 252 MNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDEN-FVPKLGDFGIV 330 (455)
Q Consensus 252 ~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~-~~~kl~DFGla 330 (455)
..|+=-|||.++++...+.. ...+....++++..+++.++.++|+ ..++|+|+||+||++..+ +..+++|||..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~---~~~~d~~~~~~~~~q~~~~l~~i~s--~~~~~~d~~psni~i~~~~~~~~~~~~~~~ 414 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVT---SQMLDEDPRLRLTAQILTALNVIHS--KLFVHLDVKPSNILISNDGFFSKLGDFGCW 414 (524)
T ss_pred cccCchhhhcCcchhhhhHH---HHhcCcchhhhhHHHHHhccccccc--hhhhcccccccceeeccchhhhhccccccc
Confidence 77788899999999887754 3357888899999999999999999 889999999999999876 88899999986
Q ss_pred cccccCCcceeeeccCCCCCCCC-CcccccC--CCCcccchHHHHHHHHHHHcCCCCCCCCcchhhHHHhhhcccchhhc
Q psy5603 331 KMSETSNMKTMYTENLTGTRPYM-PPEAMHC--QISTKTDVFSYGVILLELLTGMKPIDDNNTILYYYLVVEQEVPVREV 407 (455)
Q Consensus 331 ~~~~~~~~~~~~~~~~~gt~~Y~-aPE~~~~--~~~~~sDv~SlGvvl~elltG~~p~~~~~~~~~~~~~~~~~~~~~~~ 407 (455)
....... ....+.-.+. .+|++.. .+..+.|+||||..+.|.++|.+--....... .+..+..+
T Consensus 415 t~~~~~~------~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~---~i~~~~~p---- 481 (524)
T KOG0601|consen 415 TRLAFSS------GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL---TIRSGDTP---- 481 (524)
T ss_pred cccceec------ccccccccccccchhhccccccccccccccccccccccccCcccCcccccce---eeeccccc----
Confidence 5322111 1122333344 2454322 35679999999999999999865433221110 00000000
Q ss_pred cchhccCCChhHHHHHHHHHHHhhhccCcCCCCCHHHHHHH
Q psy5603 408 LDKEAGEWNETHVETLISIVFEKCCVFEKDKRASMRDIVDL 448 (455)
Q Consensus 408 ~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RPs~~evl~~ 448 (455)
. . ......++.+...+...++..||.+.++...
T Consensus 482 ---~----~-~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~ 514 (524)
T KOG0601|consen 482 ---N----L-PGLKLQLQVLLKVMINPDRKRRPSAVELSLH 514 (524)
T ss_pred ---C----C-CchHHhhhhhhhhhcCCccccchhhhhhccc
Confidence 0 0 1111445666778888889999988776543
No 460
>cd08312 Death_MyD88 Death domain of Myeloid Differentation primary response protein MyD88. Death Domain (DD) of Myeloid Differentiation primary response protein 88 (MyD88). MyD88 is an adaptor protein involved in interleukin-1 receptor (IL-1R)- and Toll-like receptor (TLR)-induced activation of nuclear factor-kappaB (NF-kB) and mitogen activated protein kinase pathways that lead to the induction of proinflammatory cytokines. It is a key component in the signaling pathway of pathogen recognition in the innate immune system. MyD88 contains an N-terminal DD and a C-terminal Toll/IL-1 Receptor (TIR) homology domain that mediates interaction with TLRs and IL-1R. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and
Probab=99.00 E-value=9.8e-10 Score=84.43 Aligned_cols=68 Identities=24% Similarity=0.444 Sum_probs=58.9
Q ss_pred HHHHhhhhcCCc----chHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHH
Q psy5603 20 VVHELGIILNER----DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDL 95 (455)
Q Consensus 20 ~~~~l~~~ld~~----~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l 95 (455)
++++||.+||+. ++|+.||..+ .|+..+|+.|| ...|||+.||..|++++. ++||+.|
T Consensus 1 ~R~~L~~~Ldp~~~~g~DWr~LA~~L----------g~~~~~I~~f~-------~~~sPt~~lL~~W~~r~~-~atv~~L 62 (79)
T cd08312 1 VRRRLSLFLNPPRVVAADWTALAEEM----------GFEYLEIRNFE-------TKPSPTEKVLEDWETRPD-GATVGNL 62 (79)
T ss_pred CHHHHHHHcCCCCCcccCHHHHHHHc----------CCCHHHHHHHc-------cCCChHHHHHHHHHhcCC-CCcHHHH
Confidence 579999999996 8999999975 56788999998 356999999999999855 6999999
Q ss_pred HHHHHhcccc
Q psy5603 96 IMFLKKAELH 105 (455)
Q Consensus 96 ~~~l~~~~l~ 105 (455)
+++|...+-.
T Consensus 63 ~~~L~~~~R~ 72 (79)
T cd08312 63 LELLEKLERR 72 (79)
T ss_pred HHHHHHcChH
Confidence 9999987653
No 461
>KOG3741|consensus
Probab=99.00 E-value=2.2e-08 Score=100.38 Aligned_cols=168 Identities=18% Similarity=0.287 Sum_probs=125.7
Q ss_pred CeEEEEEEEc-CCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceeeeccccc-----CceeEEE
Q psy5603 183 FGTVYYGKLK-NGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLRLLGLCN-----NIMNCIV 256 (455)
Q Consensus 183 fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----~~~~~lV 256 (455)
-.+.|++..+ +|..|++|+++........+ -..-+++++++.|+|||++.+++. +...++|
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk-------------~t~lve~wkkl~h~NvV~frevf~t~tF~D~Slvlv 355 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNK-------------DTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLV 355 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCccc-------------chHHHHHHHHhccCceeehhhhhhhhccCcceEEEE
Confidence 4567899865 69999999996554433322 223578899999999999988553 3567999
Q ss_pred EEeccCC-CHHHHHhhc------------CCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceE
Q psy5603 257 YEYMCNG-SLYDRLARV------------NNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPK 323 (455)
Q Consensus 257 ~e~~~~g-sL~~~l~~~------------~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~k 323 (455)
|+|+++. +|.++.... ..+...++...|.++.|+..||.++|+ .|+.-+-|.+.+||++.+-.++
T Consensus 356 YDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs--sGLAck~L~~~kIlv~G~~RIr 433 (655)
T KOG3741|consen 356 YDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS--SGLACKTLDLKKILVTGKMRIR 433 (655)
T ss_pred EecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh--cCceeecccHhHeEeeCcceEE
Confidence 9999865 787765321 113457789999999999999999999 7898899999999999998999
Q ss_pred EeecccccccccCCcceeeeccCCCCCCCCCcccccCCCCcccchHHHHHHHHHHHcCCCC
Q psy5603 324 LGDFGIVKMSETSNMKTMYTENLTGTRPYMPPEAMHCQISTKTDVFSYGVILLELLTGMKP 384 (455)
Q Consensus 324 l~DFGla~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~sDv~SlGvvl~elltG~~p 384 (455)
|+..|.......+.. |-+ .--.+-|.=.||.+++.|.||..-
T Consensus 434 iS~C~i~Dvl~~d~~-----------------~~l--e~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 434 ISGCGIMDVLQEDPT-----------------EPL--ESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred EecccceeeecCCCC-----------------cch--hHHhhhhHHHHHHHHHHHhhcccc
Confidence 988876654433220 101 112367888999999999999543
No 462
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.99 E-value=7.4e-09 Score=99.02 Aligned_cols=151 Identities=18% Similarity=0.132 Sum_probs=101.1
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccce--eeecccccC---
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL--LRLLGLCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~--- 250 (455)
+.+-+.....|+++... |+.|.||...........+.-- ....+...+.+|...+.+|...+| .+.+++...
T Consensus 28 e~v~~~~~rrvvr~~~~-g~~~~vKr~~~~~~~~~~k~l~--~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~ 104 (268)
T PRK15123 28 EVFRELEGRRTLRFELA-GKSYFLKWHRGTGWGEIFKNLL--SLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN 104 (268)
T ss_pred cEEecCCCceEEEEEEC-CEEEEEEEecCCcHHHHhhhhc--ccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC
Confidence 33444444557787775 7899999874332100000000 000122347889999888854333 233333321
Q ss_pred ---ceeEEEEEeccCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC-------C
Q psy5603 251 ---IMNCIVYEYMCNG-SLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE-------N 319 (455)
Q Consensus 251 ---~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~-------~ 319 (455)
...++|+|++++. +|.+++.... ..+.+...+..++.+++..+.-||. .||+|||+++.|||++. +
T Consensus 105 ~~~~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~--~Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 105 PATRTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHA--AGINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred CccceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHH--CcCccCCCChhhEEEeccccCCCCC
Confidence 2457999999886 8999886422 2345677788999999999999999 88999999999999975 4
Q ss_pred CceEEeecccccc
Q psy5603 320 FVPKLGDFGIVKM 332 (455)
Q Consensus 320 ~~~kl~DFGla~~ 332 (455)
+.+.++||+.++.
T Consensus 182 ~~~~LIDl~r~~~ 194 (268)
T PRK15123 182 LKLSVIDLHRAQI 194 (268)
T ss_pred ceEEEEECCcccc
Confidence 6899999998753
No 463
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.95 E-value=5.7e-09 Score=97.28 Aligned_cols=148 Identities=21% Similarity=0.195 Sum_probs=100.3
Q ss_pred CcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchh--------hhh-hhhHHHHHHHHHHHhhCCcc--c
Q psy5603 172 PRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNT--------EAA-MIPILLFENEVQTLSQCKHV--N 240 (455)
Q Consensus 172 ~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~--------~~~-~~~~~~~~~E~~~l~~l~h~--n 240 (455)
..++..||.|--|.||.|....|.++|||.-+....+-....... ..| .......++|.++|.++.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 356689999999999999998899999998654322111100000 011 33456678899999998544 4
Q ss_pred eeeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCC
Q psy5603 241 LLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENF 320 (455)
Q Consensus 241 iv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~ 320 (455)
+.+.++ -+.+++||||..|-.|...- ++....-.++..|+.-+.-+-. .|+||||+.+-||+++++|
T Consensus 173 VP~P~~---~nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~--~GiVHGDlSefNIlV~~dg 239 (304)
T COG0478 173 VPKPIA---WNRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYR--RGIVHGDLSEFNILVTEDG 239 (304)
T ss_pred CCCccc---cccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHH--cCccccCCchheEEEecCC
Confidence 444433 35668999999886664421 1233334445555555554445 6899999999999999999
Q ss_pred ceEEeecccccc
Q psy5603 321 VPKLGDFGIVKM 332 (455)
Q Consensus 321 ~~kl~DFGla~~ 332 (455)
.+.++||--+..
T Consensus 240 ~~~vIDwPQ~v~ 251 (304)
T COG0478 240 DIVVIDWPQAVP 251 (304)
T ss_pred CEEEEeCccccc
Confidence 999999985543
No 464
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81 E-value=6.5e-08 Score=89.22 Aligned_cols=107 Identities=19% Similarity=0.226 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHhhCCccc--eeeecccccC-----ceeEEEEEeccCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHH
Q psy5603 223 ILLFENEVQTLSQCKHVN--LLRLLGLCNN-----IMNCIVYEYMCNG-SLYDRLARVNNTPPLDSNKRYSIALGVAEAL 294 (455)
Q Consensus 223 ~~~~~~E~~~l~~l~h~n--iv~l~~~~~~-----~~~~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl 294 (455)
.....+|...+.+|..-. +.+.+++... ...++|+|++++. +|.+++..... ++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 445778888887775332 3334443322 2347999999885 89998886332 66778889999999999
Q ss_pred HHHHcCCCCeeecCCCCCcEEEcCCC---ceEEeecccccccc
Q psy5603 295 HYLHSLSKPIIHRDVKSANVLLDENF---VPKLGDFGIVKMSE 334 (455)
Q Consensus 295 ~~LH~~~~~iiH~Dikp~NILl~~~~---~~kl~DFGla~~~~ 334 (455)
.-||. .||+|+|+++.|||++.++ .+.++||+.++...
T Consensus 132 ~~lH~--~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~ 172 (206)
T PF06293_consen 132 AKLHD--AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP 172 (206)
T ss_pred HHHHH--CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence 99999 8899999999999999887 89999999877543
No 465
>PRK09902 hypothetical protein; Provisional
Probab=98.81 E-value=1e-07 Score=86.86 Aligned_cols=143 Identities=15% Similarity=0.109 Sum_probs=103.8
Q ss_pred cCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccc--eeeeccccc---C--
Q psy5603 178 LGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN--LLRLLGLCN---N-- 250 (455)
Q Consensus 178 LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~---~-- 250 (455)
-|+||-+.|++.... |..+-+|+-......+-.. ......|.+|+..+.++...+ +.+.. ++. .
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~-------P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~ 96 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRY-------PFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEG 96 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccC-------CCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCC
Confidence 478999999998876 5678899875222111110 113456999999999985433 33333 332 1
Q ss_pred -ceeEEEEEeccC-CCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc--eEEee
Q psy5603 251 -IMNCIVYEYMCN-GSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV--PKLGD 326 (455)
Q Consensus 251 -~~~~lV~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~--~kl~D 326 (455)
-.-+||+|-+.| -||.+++.... ..+.+..++..++.+++..+.-||+ .|+.|+|+.+.||+++.++. ++++|
T Consensus 97 ~~rA~LVTe~L~g~~~L~~~l~~~~-~~~~~~~~k~~il~~va~~ia~LH~--~Gv~Hgdly~khIll~~~g~~~v~lID 173 (216)
T PRK09902 97 EWRALLVTEDMAGFISIADWYAQHA-VSPYSDEVRQAMLKAVALAFKKMHS--VNRQHGCCYVRHIYVKTEGKAEAGFLD 173 (216)
T ss_pred ceEEEEEEEeCCCCccHHHHHhcCC-cCCcchHHHHHHHHHHHHHHHHHHH--CCCcCCCCCHhheeecCCCCeeEEEEE
Confidence 234789998854 48988886532 2356888889999999999999999 88999999999999986666 99999
Q ss_pred cccccc
Q psy5603 327 FGIVKM 332 (455)
Q Consensus 327 FGla~~ 332 (455)
|--++.
T Consensus 174 lEk~r~ 179 (216)
T PRK09902 174 LEKSRR 179 (216)
T ss_pred hhccch
Confidence 986553
No 466
>cd08799 Death_UNC5C Death domain found in Uncoordinated-5C. Death Domain (DD) found in Uncoordinated-5C (UNC5C). UNC5C is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5C plays a critical role in the development of spinal accesory motor neurons. Methylation of the UNC5C gene is associated with early stages of colorectal carcinogenesis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN.
Probab=98.75 E-value=3.8e-08 Score=75.51 Aligned_cols=75 Identities=19% Similarity=0.333 Sum_probs=60.5
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCC
Q psy5603 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
+|+.++++||.+||+ .++|+.+|..+--+ + .+..|+ ...|||..||+.|-.++...+|
T Consensus 1 ~p~~~R~kLc~lLd~p~~~g~DWr~LAekLgl~-------~----~l~~f~-------~~~SPT~~LLd~WEar~~~~~t 62 (84)
T cd08799 1 IPLSIRQKLCGSLDAPQTRGNDWRMLAHKLNLD-------R----YLNYFA-------TKSSPTGVILDLWEAQHFPDGN 62 (84)
T ss_pred CChHHHHHHHHHcCCCCCCCCCHHHHHHHcCCH-------H----HHHHHH-------cCCChHHHHHHHHHhccCCCCc
Confidence 699999999999997 35899999986532 2 344555 4689999999999987656899
Q ss_pred HHHHHHHHHhccccccc
Q psy5603 92 LSDLIMFLKKAELHQAA 108 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~ 108 (455)
|+.|+.+|.+.....|.
T Consensus 63 v~~L~~~L~emgR~d~~ 79 (84)
T cd08799 63 LSRLAAVLEEMGRHETV 79 (84)
T ss_pred HHHHHHHHHHcCCccch
Confidence 99999999988764443
No 467
>cd08310 Death_NFkB-like Death domain of Nuclear Factor-KappaB precursor proteins. Death Domain (DD) of Nuclear Factor-KappaB (NF-kB) precursor proteins. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). Two of these, NF-kB1 and NF-kB2 are produced from the processing of the precursor proteins p105 and p100, respectively. In addition to RHD, p105 and p100 contain ANK repeats and a C-terminal DD. NF-kBs are regulated by the Inhibitor of NF-kB (IkB) Kinase (IKK) complex through classical and non-canonical pathways, which differ in the IKK subunits involved and downstream targets. IKKs facilitate the release of NF-kB dimers from an inactive state, allowing them to migrate to the nucleus where they regulate gene transcription. The precursor proteins p105 and p100 function
Probab=98.74 E-value=2.2e-08 Score=75.19 Aligned_cols=71 Identities=15% Similarity=0.262 Sum_probs=59.5
Q ss_pred HHHHhhhhcCCcchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHHHHHH
Q psy5603 20 VVHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIMFL 99 (455)
Q Consensus 20 ~~~~l~~~ld~~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~~l 99 (455)
.+++||.+||+..+|+.+|..+ .|+ ..|..|+ ...|||..||+.|..+ ++||++|+++|
T Consensus 1 ~r~~L~~lLd~~~dWr~LA~~L----------~~~-~~i~~~~-------~~~sPt~~LL~~we~~---~~tv~~L~~~L 59 (72)
T cd08310 1 TRERLCKLLDDGCDWRELAQLL----------DLG-HLVNFIR-------LSPSPTKMLLDYFEMQ---GGTLERLRDAL 59 (72)
T ss_pred CHHHHHHHhCCCCCHHHHHHHc----------CcH-HHHHHHh-------cCCCHHHHHHHHHHhC---CCCHHHHHHHH
Confidence 3789999999999999999985 333 3477777 5789999999999998 59999999999
Q ss_pred Hhcccccccccc
Q psy5603 100 KKAELHQAARYV 111 (455)
Q Consensus 100 ~~~~l~~~~~~~ 111 (455)
.+.....|+.++
T Consensus 60 ~~mgr~dav~~l 71 (72)
T cd08310 60 EVLGETEAVELI 71 (72)
T ss_pred HHcCcHHHHHhc
Confidence 999887777643
No 468
>KOG2137|consensus
Probab=98.73 E-value=4.1e-09 Score=108.97 Aligned_cols=150 Identities=17% Similarity=0.252 Sum_probs=100.8
Q ss_pred HHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccCCcce------eeeccCCCCCCCCCcccccC-C
Q psy5603 289 GVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSETSNMKT------MYTENLTGTRPYMPPEAMHC-Q 361 (455)
Q Consensus 289 ~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~~~~~~------~~~~~~~gt~~Y~aPE~~~~-~ 361 (455)
+++.|+.|+|+. .++||++|.|++|.++.++..||+.|+++.......... .......-...|.|||++.+ .
T Consensus 107 ~v~dgl~flh~s-Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~ 185 (700)
T KOG2137|consen 107 NVADGLAFLHRS-AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTT 185 (700)
T ss_pred cccchhhhhccC-cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccc
Confidence 445999999985 579999999999999999999999999876544321111 11112234567999996654 4
Q ss_pred CCcccchHHHHHHHHHHHc-CCCCCCCCcchhhHHHhhhcccchhhccchhccCCChhHHHHHHHHHHHhhhccCcCCCC
Q psy5603 362 ISTKTDVFSYGVILLELLT-GMKPIDDNNTILYYYLVVEQEVPVREVLDKEAGEWNETHVETLISIVFEKCCVFEKDKRA 440 (455)
Q Consensus 362 ~~~~sDv~SlGvvl~ellt-G~~p~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~Li~~~l~~dp~~RP 440 (455)
.+.++|+||+||++|.+.. |+.-+...+....+..... .... ....-...++..+++-+.+++..++..||
T Consensus 186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~-~~~~-------~~~~~s~~~p~el~~~l~k~l~~~~~~rp 257 (700)
T KOG2137|consen 186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN-LLNA-------GAFGYSNNLPSELRESLKKLLNGDSAVRP 257 (700)
T ss_pred ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc-cccc-------ccccccccCcHHHHHHHHHHhcCCcccCc
Confidence 5789999999999999994 5555555443322222111 1010 00011134566677778899999999999
Q ss_pred CHHHHHH
Q psy5603 441 SMRDIVD 447 (455)
Q Consensus 441 s~~evl~ 447 (455)
++.++..
T Consensus 258 ~~~~l~~ 264 (700)
T KOG2137|consen 258 TLDLLLS 264 (700)
T ss_pred chhhhhc
Confidence 8877643
No 469
>cd08802 Death_UNC5B Death domain found in Uncoordinated-5B. Death Domain (DD) found in Uncoordinated-5B (UNC5B). UNC5B is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5B signaling is involved in the netrin-1-induced proliferation and migration of renal proximal tubular cells. It is also required for vascular patterning during embryonic development, and its activation inhibits sprouting angiogenesis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activatio
Probab=98.70 E-value=6.2e-08 Score=74.19 Aligned_cols=75 Identities=15% Similarity=0.301 Sum_probs=60.9
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCC
Q psy5603 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
||+.++++||..||+ .++|+.||..+--+ + .+..|| ...|||..||+.|-.+++..++
T Consensus 1 ~p~~vR~kLc~~Ld~p~~~g~DW~~LAekL~ld-------~----yl~~f~-------~~psPT~~LLd~WE~~~~~~~~ 62 (84)
T cd08802 1 IPLSIRQKICNSLDAPNSRGNDWRLLAQKLSMD-------R----YLNYFA-------TKASPTGVILDLWEARHQDDGD 62 (84)
T ss_pred CChhHHHHHHHHhCCCCCCCCcHHHHHHHcCch-------h----HHHHHH-------cCCCcHHHHHHHHHhcCCCccc
Confidence 699999999999997 47899999986532 2 334555 3569999999999998767899
Q ss_pred HHHHHHHHHhccccccc
Q psy5603 92 LSDLIMFLKKAELHQAA 108 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~ 108 (455)
|++|+++|.+.....+.
T Consensus 63 v~~L~~~L~~mgR~D~~ 79 (84)
T cd08802 63 LNSLASALEEMGKSEML 79 (84)
T ss_pred HHHHHHHHHHcCcchHH
Confidence 99999999988765443
No 470
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.69 E-value=8.8e-08 Score=99.15 Aligned_cols=163 Identities=20% Similarity=0.200 Sum_probs=99.8
Q ss_pred HHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcC-------------------CC-C-Cchh-
Q psy5603 159 LERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYS-------------------SS-N-SDNT- 216 (455)
Q Consensus 159 l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~-------------------~~-~-~~~~- 216 (455)
+.+....|++. -|+.++-|.||+|++++|+.||||+.++..... .. . .+-.
T Consensus 121 iee~F~eF~~~-------PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~ 193 (517)
T COG0661 121 IEELFSEFEPE-------PIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVE 193 (517)
T ss_pred HHHHHHHcCCC-------chhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHH
Confidence 44556677764 599999999999999999999999987653210 00 0 0000
Q ss_pred -----hhhhhhHHHHHHHHHHHhhCC----ccceeeecccccC--ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHH
Q psy5603 217 -----EAAMIPILLFENEVQTLSQCK----HVNLLRLLGLCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYS 285 (455)
Q Consensus 217 -----~~~~~~~~~~~~E~~~l~~l~----h~niv~l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~ 285 (455)
.........+.+|...+.+++ ...-+.+-..+.+ ....++|||+.|-.+.+...-.. ..++.. .
T Consensus 194 vv~e~~~~l~~ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~k---~ 268 (517)
T COG0661 194 VVDEFEKRLREELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDRK---E 268 (517)
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCHH---H
Confidence 000111122445555554442 2222233333322 56689999999999988743322 124422 2
Q ss_pred HHHHHHHH-HHHHHcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q psy5603 286 IALGVAEA-LHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMSET 335 (455)
Q Consensus 286 i~~~i~~g-l~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~~~ 335 (455)
++..++++ +..+-. .|++|.|.+|.||+++.+|.+.+.|||+......
T Consensus 269 ia~~~~~~f~~q~~~--dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 269 LAELLVRAFLRQLLR--DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHHHHHHHHHHHh--cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 33323222 222222 5799999999999999999999999999875543
No 471
>cd08800 Death_UNC5A Death domain found in Uncoordinated-5A. Death Domain (DD) found in Uncoordinated-5A (UNC5A). UNC5A is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a critical role in neuronal development and differentiation, as well as axon-guidance. It also plays a role in regulating apoptosis in non-neuronal cells as a downstream target of p53. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathway
Probab=98.51 E-value=4.5e-07 Score=69.02 Aligned_cols=75 Identities=13% Similarity=0.279 Sum_probs=61.9
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCC
Q psy5603 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
+|+.++++||..||+ .++|+.+|...--+ ..+..|+ .-.|||..||+.|.++++..+|
T Consensus 1 ip~~iR~kLc~lLD~p~~~G~DWr~LA~kL~ld-----------~~~~~f~-------~~pSPT~~LLd~WEa~~~~~g~ 62 (84)
T cd08800 1 IPFLIRQKIISSLDAPCPNGADWRLLAQKLKLD-----------SHLSFFA-------SKSSPTAVILNLWEAQHFPNGN 62 (84)
T ss_pred CChHHHHHHHHHcCCCCCCCCcHHHHHHHcCCc-----------cHHHHHH-------cCCChHHHHHHHHHhccCCCCc
Confidence 689999999999997 68999999987644 2455555 3569999999999998888999
Q ss_pred HHHHHHHHHhccccccc
Q psy5603 92 LSDLIMFLKKAELHQAA 108 (455)
Q Consensus 92 ~~~l~~~l~~~~l~~~~ 108 (455)
|++|...|....-..|+
T Consensus 63 l~~L~~~l~emGR~da~ 79 (84)
T cd08800 63 LNQLAAVVAEIGKQDAM 79 (84)
T ss_pred HHHHHHHHHHhCchHHH
Confidence 99999999887655444
No 472
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.47 E-value=2.2e-06 Score=80.23 Aligned_cols=138 Identities=15% Similarity=0.160 Sum_probs=80.7
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccce--eeecccccC-ce
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNL--LRLLGLCNN-IM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~-~~ 252 (455)
..||+|..+.||+. . +..+++|....... .....+|.++++.+..-.+ .+.+++..+ +.
T Consensus 7 ~~i~~G~t~~~y~~--~-~~~~VlR~~~~~~~---------------~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~ 68 (226)
T TIGR02172 7 TQTGEGGNGESYTH--K-TGKWMLKLYNPGFD---------------KETIKREFDASRKVFSLGIPTPHPFDLVEDGGR 68 (226)
T ss_pred eeecCCCCcceeEe--c-CCCEEEEeCCCCCC---------------HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCe
Confidence 56899999999984 2 45678888753221 2235789999888764433 445666554 55
Q ss_pred eEEEEEeccCCC-HH--------------HHHhh----cCCC--CCCCHHHHHH-HHH----------HHHH-HHHHHHc
Q psy5603 253 NCIVYEYMCNGS-LY--------------DRLAR----VNNT--PPLDSNKRYS-IAL----------GVAE-ALHYLHS 299 (455)
Q Consensus 253 ~~lV~e~~~~gs-L~--------------~~l~~----~~~~--~~l~~~~~~~-i~~----------~i~~-gl~~LH~ 299 (455)
..+||+++.|.+ +. ..+.. .... +......... +.. .+.. ...+|.+
T Consensus 69 ~glv~e~i~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~ 148 (226)
T TIGR02172 69 LGLIYELIVGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKE 148 (226)
T ss_pred eeeeeeecCCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHh
Confidence 678999998863 21 11111 0100 1111111110 000 0111 1222222
Q ss_pred --CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 300 --LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 300 --~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
....++|||+.|.||++++++ +.|+||+.+..
T Consensus 149 ~~~~~~~~HgD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 149 VPDTSTCLHGDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCCCCceEecCCCCCcEEEcCCC-cEEEechhcCc
Confidence 224579999999999999988 99999997654
No 473
>KOG1235|consensus
Probab=98.43 E-value=1.6e-06 Score=89.67 Aligned_cols=163 Identities=17% Similarity=0.179 Sum_probs=96.6
Q ss_pred HHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCC-------------------CCC-----ch
Q psy5603 160 ERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSS-------------------SNS-----DN 215 (455)
Q Consensus 160 ~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~-------------------~~~-----~~ 215 (455)
+.+...|++ +-||.-+.|.||+|+.++|+.||||+-++.-.... ... ++
T Consensus 158 e~if~~f~~-------~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE 230 (538)
T KOG1235|consen 158 EDIFSEFDE-------EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDE 230 (538)
T ss_pred HHHHHhcCc-------chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHH
Confidence 344556665 46999999999999999999999999765422100 000 00
Q ss_pred hhhhhhhHHHHHHHHHHHhh----CCccce---eeecccccC--ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHH
Q psy5603 216 TEAAMIPILLFENEVQTLSQ----CKHVNL---LRLLGLCNN--IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSI 286 (455)
Q Consensus 216 ~~~~~~~~~~~~~E~~~l~~----l~h~ni---v~l~~~~~~--~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i 286 (455)
.....-....|.+|.+-..+ ++|-+. |.+-.++.+ ....|+||||.|..+.|.-.-... .++...+..-
T Consensus 231 ~~~~L~~ELDF~~EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~ 308 (538)
T KOG1235|consen 231 IAKSLPQELDFTKEAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNK 308 (538)
T ss_pred HHhhhHhhcchHHHHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHH
Confidence 00000111235555554433 345551 112233322 466899999999988765332211 2444443333
Q ss_pred HHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC----CCceEEeeccccccccc
Q psy5603 287 ALGVAEALHYLHSLSKPIIHRDVKSANVLLDE----NFVPKLGDFGIVKMSET 335 (455)
Q Consensus 287 ~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~----~~~~kl~DFGla~~~~~ 335 (455)
+.++..-.- ++ .|++|+|-+|.||++.. ++.+.+.|||+......
T Consensus 309 l~~~~~~qI-f~---~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 309 LVEAYLEQI-FK---TGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred HHHHHHHHH-Hh---cCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 333222111 22 57999999999999984 67999999999775543
No 474
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.40 E-value=2.2e-06 Score=79.48 Aligned_cols=168 Identities=18% Similarity=0.220 Sum_probs=98.5
Q ss_pred eeHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCC-----c------hhhhhhhh
Q psy5603 154 FTFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNS-----D------NTEAAMIP 222 (455)
Q Consensus 154 ~~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~-----~------~~~~~~~~ 222 (455)
.+...|....+ ...+......|++|--+.||+|...++..||||+++.......... + .....+..
T Consensus 35 ~t~~~l~~L~~---rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv 111 (268)
T COG1718 35 RTLETLRRLLS---RGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLV 111 (268)
T ss_pred HHHHHHHHHhc---CCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHH
Confidence 34444444433 3333355567899999999999987789999999975533211100 0 00000000
Q ss_pred HHHHHHHHHHHhhCCcc--ceeeecccccCceeEEEEEeccCCCH-HHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc
Q psy5603 223 ILLFENEVQTLSQCKHV--NLLRLLGLCNNIMNCIVYEYMCNGSL-YDRLARVNNTPPLDSNKRYSIALGVAEALHYLHS 299 (455)
Q Consensus 223 ~~~~~~E~~~l~~l~h~--niv~l~~~~~~~~~~lV~e~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~ 299 (455)
..=...|+.-|+++... .+.+-+++ ....|||||+....+ .-.|.. .++.......+..++++.+.-|-.
T Consensus 112 ~~W~~kEf~NL~R~~eAGVrvP~Pi~~---~~nVLvMEfIg~~g~pAP~LkD----v~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 112 FAWARKEFRNLKRAYEAGVRVPEPIAF---RNNVLVMEFIGDDGLPAPRLKD----VPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCceee---cCCeEEEEeccCCCCCCCCccc----CCcCchhHHHHHHHHHHHHHHHHH
Confidence 11123355555555322 22222222 234799999954311 111111 123333567777888888877665
Q ss_pred CCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 300 LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 300 ~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
. .++||+||..-|||+. ++.+.|+|||-|...
T Consensus 185 ~-a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 185 E-AGLVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred h-cCcccccchhhheEEE-CCeEEEEECcccccc
Confidence 2 4699999999999999 889999999976543
No 475
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=2.8e-06 Score=74.59 Aligned_cols=131 Identities=20% Similarity=0.177 Sum_probs=92.2
Q ss_pred CCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceee-ecccccCce
Q psy5603 174 RGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR-LLGLCNNIM 252 (455)
Q Consensus 174 ~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~ 252 (455)
+...|++|++|.||+|.+. |..+|+|+-+.++. ...+..|.++|..+.-.++-+ +|.|..+
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~---------------r~~l~kEakiLeil~g~~~~p~vy~yg~~-- 87 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP---------------RRNLEKEAKILEILAGEGVTPEVYFYGED-- 87 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCCcc---------------hhhHHHHHHHHHHhhhcCCCceEEEechh--
Confidence 3478999999999999998 57999999765443 444889999999887766655 3333333
Q ss_pred eEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCC-CCcEEEcCCCceEEeeccccc
Q psy5603 253 NCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVK-SANVLLDENFVPKLGDFGIVK 331 (455)
Q Consensus 253 ~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dik-p~NILl~~~~~~kl~DFGla~ 331 (455)
.+.|||+.|-+|.+.-.. .+..+. ..++..-.-|-. .||-|+.|. |...+|-.++.+.|+||..|+
T Consensus 88 -~i~me~i~G~~L~~~~~~------~~rk~l----~~vlE~a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 88 -FIRMEYIDGRPLGKLEIG------GDRKHL----LRVLEKAYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred -hhhhhhhcCcchhhhhhc------ccHHHH----HHHHHHHHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchh
Confidence 345999998888776542 122333 344444444555 679999986 666666666699999999887
Q ss_pred cccc
Q psy5603 332 MSET 335 (455)
Q Consensus 332 ~~~~ 335 (455)
+...
T Consensus 155 ~k~~ 158 (201)
T COG2112 155 FKKK 158 (201)
T ss_pred hccC
Confidence 5443
No 476
>cd08801 Death_UNC5D Death domain found in Uncoordinated-5D. Death Domain (DD) found in Uncoordinated-5D (UNC5D). UNC5D is part of the UNC-5 homolog family. It is a receptor for the secreted netrin-1 and plays a role in axonal guidance, angiogenesis, and apoptosis. UNC5 proteins are transmembrane proteins with an extracellular domain consisting of two immunoglobulin repeats, two thrombospondin type-I modules and an intracellular region containing a ZU-5 domain, UPA domain and a DD. In general, DDs are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. They serve as adaptors in signaling pathways and can recruit other proteins into signaling complexes.
Probab=98.28 E-value=3.6e-06 Score=64.33 Aligned_cols=71 Identities=11% Similarity=0.300 Sum_probs=60.0
Q ss_pred cCHHHHHHhhhhcCC----cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCC
Q psy5603 16 LKQYVVHELGIILNE----RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPR 91 (455)
Q Consensus 16 l~~~~~~~l~~~ld~----~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~ 91 (455)
+|+.++++||..||+ .++|+.||-.+.-+ ..|.-|. ...|||.-+|+-|.++++.+.+
T Consensus 1 iP~~iRqklC~~LD~p~~kg~DWR~LA~kL~iD-----------Ryl~yFa-------tk~SPT~viLdLWEa~~~~~g~ 62 (98)
T cd08801 1 IPYSIRQRICATFDTPNAKGKDWQMLAQKNSID-----------RNLSYFA-------TQSSPSAVILSLWEARHQHDGD 62 (98)
T ss_pred CchhHHHHHHHHcCCCCCCCccHHHHHHHhcch-----------hHHHHHh-------cCCChHHHHHHHHHHhcCCCCC
Confidence 699999999999998 68999999987654 2455554 3689999999999999999999
Q ss_pred HHHHHHHHHhccc
Q psy5603 92 LSDLIMFLKKAEL 104 (455)
Q Consensus 92 ~~~l~~~l~~~~l 104 (455)
+..|..+|....-
T Consensus 63 L~~La~aleeiGr 75 (98)
T cd08801 63 LDSLACALEEIGR 75 (98)
T ss_pred HHHHHHHHHHhCc
Confidence 9999988876653
No 477
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.28 E-value=5.1e-06 Score=76.18 Aligned_cols=137 Identities=14% Similarity=0.120 Sum_probs=83.3
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCcc---ceeeecccc----
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHV---NLLRLLGLC---- 248 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~---- 248 (455)
+.+-......|.+-..+ |+.+++|..+......... -.....-....+++..+.+++.. ...+++-+.
T Consensus 37 kv~k~~~r~~ValIei~-~~kyIlK~pr~~~~r~er~----~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~ 111 (229)
T PF06176_consen 37 KVFKNTKRNYVALIEID-GKKYILKEPREENRRPERR----FKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKI 111 (229)
T ss_pred EeecCCCccEEEEEEEC-CcEEEEeccchhhhhHHHH----HHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeee
Confidence 55666667777777665 6899999986543210000 00000001123344444444322 222222211
Q ss_pred --cCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEee
Q psy5603 249 --NNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGD 326 (455)
Q Consensus 249 --~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~D 326 (455)
.....++||||++|..|.+... ++. .++..+..++.-||+ .|+.|||.+|+|+++.+++ ++++|
T Consensus 112 ~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~--~G~~HGD~hpgNFlv~~~~-i~iID 177 (229)
T PF06176_consen 112 FRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHK--HGFYHGDPHPGNFLVSNNG-IRIID 177 (229)
T ss_pred ccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHH--cCCccCCCCcCcEEEECCc-EEEEE
Confidence 1134468999999998876533 222 245667788999999 8899999999999999655 89999
Q ss_pred ccccc
Q psy5603 327 FGIVK 331 (455)
Q Consensus 327 FGla~ 331 (455)
|+..+
T Consensus 178 ~~~k~ 182 (229)
T PF06176_consen 178 TQGKR 182 (229)
T ss_pred Ccccc
Confidence 98654
No 478
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.26 E-value=5.5e-06 Score=77.10 Aligned_cols=141 Identities=22% Similarity=0.208 Sum_probs=80.9
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccc--eeeecccccC---
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN--LLRLLGLCNN--- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~--- 250 (455)
+.|+.|..+.||+....+ ..+++|..... .....+.+|..++..+.... +.+++.++..
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---------------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~ 66 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---------------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEF 66 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH---------------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---------------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccc
Confidence 468999999999999886 69999997532 01344667888877775333 3445543211
Q ss_pred -ceeEEEEEeccCCCHHH----------------HHh---hc-CCCCCCCHHH---------HHHH------------HH
Q psy5603 251 -IMNCIVYEYMCNGSLYD----------------RLA---RV-NNTPPLDSNK---------RYSI------------AL 288 (455)
Q Consensus 251 -~~~~lV~e~~~~gsL~~----------------~l~---~~-~~~~~l~~~~---------~~~i------------~~ 288 (455)
...+++|++++|.++.. .+. .. ....++.... .... ..
T Consensus 67 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (239)
T PF01636_consen 67 NGFPYLLMEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLE 146 (239)
T ss_dssp TSEEEEEEEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
T ss_pred cccceEEEEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhH
Confidence 34689999999998877 111 11 0111111111 0000 11
Q ss_pred HHHH-HHHHHHc-----CCCCeeecCCCCCcEEEc-CCCceEEeecccccc
Q psy5603 289 GVAE-ALHYLHS-----LSKPIIHRDVKSANVLLD-ENFVPKLGDFGIVKM 332 (455)
Q Consensus 289 ~i~~-gl~~LH~-----~~~~iiH~Dikp~NILl~-~~~~~kl~DFGla~~ 332 (455)
.+.. .+..+++ ....++|+|+.|.|||++ +++.+-|+||+.+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 147 ELEERLLQELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHHHHHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HHHHHHHHHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2222 3333332 235699999999999999 666668999987653
No 479
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.20 E-value=1.7e-05 Score=74.97 Aligned_cols=139 Identities=17% Similarity=0.154 Sum_probs=80.1
Q ss_pred ccCcCCC-eEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccceeeecccccC-cee
Q psy5603 177 KLGEGQF-GTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNLLRLLGLCNN-IMN 253 (455)
Q Consensus 177 ~LG~G~f-g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~-~~~ 253 (455)
.|..|.. ..||+.... +..+.||...... .....+|+++++.+. +--+.+++++... +..
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----------------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~ 67 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP----------------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRA 67 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc----------------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCcc
Confidence 3555555 889999765 4778888875321 011556888877763 3334455665544 567
Q ss_pred EEEEEeccCCCHHHHH-------------------hhcCC-CCCCCHH--HHHHHHH--------------------HHH
Q psy5603 254 CIVYEYMCNGSLYDRL-------------------ARVNN-TPPLDSN--KRYSIAL--------------------GVA 291 (455)
Q Consensus 254 ~lV~e~~~~gsL~~~l-------------------~~~~~-~~~l~~~--~~~~i~~--------------------~i~ 291 (455)
++||++++|.+|.... +.... ..++... ....... .+.
T Consensus 68 ~lv~e~i~G~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (244)
T cd05150 68 WLLTSAVPGVPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAE 147 (244)
T ss_pred EEEEEeeCCccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHH
Confidence 8999999998876432 11100 0011100 0000000 011
Q ss_pred HHHHHHHc-----CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 292 EALHYLHS-----LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 292 ~gl~~LH~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..+..|-. ....++|||+.|.|||+++++...|+||+.+..
T Consensus 148 ~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 148 ELYAELEATRPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred HHHHHHHhhCCCcCceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 11222211 113489999999999999988888999997653
No 480
>PLN02876 acyl-CoA dehydrogenase
Probab=98.10 E-value=3.1e-05 Score=86.11 Aligned_cols=78 Identities=18% Similarity=0.301 Sum_probs=54.8
Q ss_pred CccCcCCCeEEEEEEEcCC---cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC-ccce--eeeccccc
Q psy5603 176 NKLGEGQFGTVYYGKLKNG---MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK-HVNL--LRLLGLCN 249 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~---~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-h~ni--v~l~~~~~ 249 (455)
..|+.|.+..+|+....++ ..+++|+........ ....+.+|.++++.+. |.++ .+++.+|.
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~------------~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~ 111 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ------------SAHAVEREYQVLRALGEHTDVPVPKVYCLCT 111 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc------------cHHHHHHHHHHHHHHhhcCCCCCCcEEEEec
Confidence 6789999999999887643 467888764322100 0224778999999985 6654 66777776
Q ss_pred C----ceeEEEEEeccCCCH
Q psy5603 250 N----IMNCIVYEYMCNGSL 265 (455)
Q Consensus 250 ~----~~~~lV~e~~~~gsL 265 (455)
+ +..|+||||++|..+
T Consensus 112 d~~v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 112 DASVIGTAFYIMEYLEGRIF 131 (822)
T ss_pred CCCcCCCceEEEEecCCccc
Confidence 5 467899999988653
No 481
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.09 E-value=1.2e-05 Score=72.82 Aligned_cols=105 Identities=27% Similarity=0.225 Sum_probs=81.4
Q ss_pred HHHHHHHHhhCCc-cceeeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC-CCC
Q psy5603 226 FENEVQTLSQCKH-VNLLRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSL-SKP 303 (455)
Q Consensus 226 ~~~E~~~l~~l~h-~niv~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~-~~~ 303 (455)
..+|.-++..+.+ +++.+++|+|.+ .+|.||...+++...-......-..+|..|.+|+.++++.+.+|+.. ...
T Consensus 6 ~~~E~lll~~l~~~~~~pk~lG~CG~---~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 6 QNNEPLLLQLLQGSEPFPKLLGSCGR---FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred hccHHHHHHHcCCCCCCCCeeeECCC---EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 3568888888876 699999999965 67999998776643210000112368999999999999999999975 234
Q ss_pred eeecCCCCCcEEEcCCCceEEeeccccccc
Q psy5603 304 IIHRDVKSANVLLDENFVPKLGDFGIVKMS 333 (455)
Q Consensus 304 iiH~Dikp~NILl~~~~~~kl~DFGla~~~ 333 (455)
+.-.|++++|+-++++|.+|++|...+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 788899999999999999999999865543
No 482
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=98.06 E-value=3.5e-05 Score=72.45 Aligned_cols=31 Identities=23% Similarity=0.427 Sum_probs=26.1
Q ss_pred CCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..++|||+.+.|||+++++..-|+||+.+..
T Consensus 164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred ceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 3489999999999999776667999997653
No 483
>smart00005 DEATH DEATH domain, found in proteins involved in cell death (apoptosis). Alpha-helical domain present in a variety of proteins with apoptotic functions. Some (but not all) of these domains form homotypic and heterotypic dimers.
Probab=97.91 E-value=1.8e-05 Score=62.29 Aligned_cols=81 Identities=19% Similarity=0.300 Sum_probs=67.1
Q ss_pred HHHHHhhhhcCC--cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHHH
Q psy5603 19 YVVHELGIILNE--RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLI 96 (455)
Q Consensus 19 ~~~~~l~~~ld~--~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~ 96 (455)
..+.+|+.++|. ..+|++||..+. ++..+|+.|+....+ ...+|+.++|..|.+++..++||..|+
T Consensus 3 ~~~~~~~~l~~~~~g~~W~~la~~Lg----------~~~~~i~~i~~~~~~--~~~~~~~~lL~~W~~~~g~~at~~~L~ 70 (88)
T smart00005 3 LTREKLAKLLDHPLGLDWRELARKLG----------LSEADIDQIRTEAPR--DLAEQSVQLLRLWEQREGKNATLGTLL 70 (88)
T ss_pred hHHHHHHHHHcCccchHHHHHHHHcC----------CCHHHHHHHHHHCCC--CHHHHHHHHHHHHHHccchhhHHHHHH
Confidence 456778888874 799999998754 447899999988754 467999999999999877789999999
Q ss_pred HHHHhcccccccccc
Q psy5603 97 MFLKKAELHQAARYV 111 (455)
Q Consensus 97 ~~l~~~~l~~~~~~~ 111 (455)
..|.+..+..+++.+
T Consensus 71 ~aL~~~~~~d~a~~i 85 (88)
T smart00005 71 EALRKMGRDDAVELL 85 (88)
T ss_pred HHHHHcChHHHHHHH
Confidence 999999887777643
No 484
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.88 E-value=0.00015 Score=65.83 Aligned_cols=131 Identities=24% Similarity=0.269 Sum_probs=86.5
Q ss_pred CccCcCCC-eEEEEEEEcCCcEEEEEEeecccCcCCCCC---c---hh--hhhhhhHHHHHHHHHHHhhCC---ccce--
Q psy5603 176 NKLGEGQF-GTVYYGKLKNGMEIAVKTLENNANYSSSNS---D---NT--EAAMIPILLFENEVQTLSQCK---HVNL-- 241 (455)
Q Consensus 176 ~~LG~G~f-g~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~---~---~~--~~~~~~~~~~~~E~~~l~~l~---h~ni-- 241 (455)
+.||.|.- |.||++... |+.+|+|.++.-........ . .. .....-..-|..|.+...+++ +.++
T Consensus 43 efLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~e~~~A 121 (207)
T PF13095_consen 43 EFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGREGLWA 121 (207)
T ss_pred eecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccccCceE
Confidence 78999999 999999997 78999999432111111100 0 00 000112335889999988875 4455
Q ss_pred eeecccc--c-C----------------ceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCC
Q psy5603 242 LRLLGLC--N-N----------------IMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSK 302 (455)
Q Consensus 242 v~l~~~~--~-~----------------~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~ 302 (455)
|+++||. . + ....+|.||.+... .++ .+-+.++.+-+..+|. .
T Consensus 122 vkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~----~~~~~~~~~dl~~~~k--~ 183 (207)
T PF13095_consen 122 VKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQ----IRDIPQMLRDLKILHK--L 183 (207)
T ss_pred EEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccc----hhHHHHHHHHHHHHHH--C
Confidence 8888864 1 0 11247778776543 122 2235677888999999 7
Q ss_pred CeeecCCCCCcEEEcCCCceEEeecccc
Q psy5603 303 PIIHRDVKSANVLLDENFVPKLGDFGIV 330 (455)
Q Consensus 303 ~iiH~Dikp~NILl~~~~~~kl~DFGla 330 (455)
||+-+|+++.|.. .-||+|||.+
T Consensus 184 gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 184 GIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred CeeeccCcccccc-----CCEEEecccC
Confidence 8999999999987 3489999854
No 485
>KOG0576|consensus
Probab=97.83 E-value=3.8e-06 Score=86.65 Aligned_cols=181 Identities=19% Similarity=0.146 Sum_probs=124.1
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccc-eeeecccccC-cee
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN-LLRLLGLCNN-IMN 253 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~-~~~ 253 (455)
+-+++|+++.++|.+..-.+....+.+... ....-+++.|.+++||| .+..++-+.. ...
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~------------------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~ 309 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT------------------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYL 309 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc------------------hhhHHHHHHHHHccCCCCcccccccCCccccc
Confidence 557999999999976432233335554321 11445889999999999 5555554444 666
Q ss_pred EEEEEeccCC-CHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 254 CIVYEYMCNG-SLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 254 ~lV~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++++++.++ |-....... -..+..-+...+...-+++++++|+ ..-+|+| ||+..+ +..|..||+....
T Consensus 310 ~i~~~i~s~~rs~~~~~~~s--e~~~~~~~~~~~~r~et~~l~~l~~--~~~~~~d----~~l~s~-~~~~~~~~~v~~~ 380 (829)
T KOG0576|consen 310 WIPMRICSTGRSSALEMTVS--EIALEQYQFAYPLRKETRPLAELHS--SYKVHRD----NILGSE-EEVKLLDFAVPPQ 380 (829)
T ss_pred chhhhhhcCCccccccCChh--hHhhhhhhhhhhhhhhccccccccc--ccccCcc----cccccc-cccccccccCCcc
Confidence 8899999877 222111110 1123344556677788899999999 3358888 777665 6889999997664
Q ss_pred cccCCcceeeeccCCCCCCCCCccc-ccCCCCcccchHHHHHHHHHHHcCCCCCCC
Q psy5603 333 SETSNMKTMYTENLTGTRPYMPPEA-MHCQISTKTDVFSYGVILLELLTGMKPIDD 387 (455)
Q Consensus 333 ~~~~~~~~~~~~~~~gt~~Y~aPE~-~~~~~~~~sDv~SlGvvl~elltG~~p~~~ 387 (455)
..... ......+|+.++|||+ ..+.+....|.||+|+-..++.-|.+|-..
T Consensus 381 L~~~~----~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 381 LTRTM----KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred cCccc----ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 43321 3456789999999994 556678899999999988888888877654
No 486
>PRK10593 hypothetical protein; Provisional
Probab=97.83 E-value=0.0003 Score=68.70 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=52.1
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCc---cceeeecccccC--
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKH---VNLLRLLGLCNN-- 250 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~-- 250 (455)
+.||+|..+.||+....++ .+.+|..+.... ...|.+|...++.+.- ..+.+++++|..
T Consensus 20 ~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~~~---------------~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~ 83 (297)
T PRK10593 20 ECISEQPYAALWALYDSQG-NPMPLMARSFST---------------PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQ 83 (297)
T ss_pred eecCCccceeEEEEEcCCC-CEEEEEeccccc---------------chHHHHHHHHHHHHccCCCCCcCcEEEEeccCC
Confidence 5699999999999876544 567777432111 1238889999888743 356667766532
Q ss_pred --ceeEEEEEeccCCCH
Q psy5603 251 --IMNCIVYEYMCNGSL 265 (455)
Q Consensus 251 --~~~~lV~e~~~~gsL 265 (455)
+..++|||++.|+++
T Consensus 84 ~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 84 SPGPDVLLLERLRGVSV 100 (297)
T ss_pred cCCCeEEEEeccCCEec
Confidence 557999999998765
No 487
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.76 E-value=0.00026 Score=66.37 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=46.8
Q ss_pred CccCcCCCeEEEEEEEcC--CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceee-ecccccCce
Q psy5603 176 NKLGEGQFGTVYYGKLKN--GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR-LLGLCNNIM 252 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~--~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~ 252 (455)
+.|..|-...+|+....+ +..|++|........ . . .-.+|+.+++.+...++++ +++.+.
T Consensus 4 ~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---~-~----------d~~~E~~~~~~l~~~gl~P~v~~~~~--- 66 (235)
T cd05157 4 KRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---I-I----------DRERELRIHKLLSKHGLAPKLYATFQ--- 66 (235)
T ss_pred EEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---e-e----------cHHHHHHHHHHHHhCCCCCeEEEEeC---
Confidence 467888899999998763 578999976532110 0 0 1246888888775444433 333322
Q ss_pred eEEEEEeccCCCH
Q psy5603 253 NCIVYEYMCNGSL 265 (455)
Q Consensus 253 ~~lV~e~~~~gsL 265 (455)
..+||||++|.++
T Consensus 67 ~~~l~e~i~G~~l 79 (235)
T cd05157 67 NGLIYEFIPGRTL 79 (235)
T ss_pred CcEEEEeeCCCcC
Confidence 2479999998776
No 488
>PF00531 Death: Death domain; InterPro: IPR000488 The death domain (DD) is a homotypic protein interaction module composed of a bundle of six alpha-helices. DD is related in sequence and structure to the death effector domain (DED, see IPR001875 from INTERPRO) and the caspase recruitment domain (CARD, see IPR001315 from INTERPRO), which work in similar pathways and show similar interaction properties []. DD bind each other forming oligomers. Mammals have numerous and diverse DD-containing proteins []. Within these proteins, the DD domains can be found in combination with other domains, including: CARDs, DEDs, ankyrin repeats (IPR002110 from INTERPRO), caspase-like folds, kinase domains, leucine zippers (IPR002158 from INTERPRO), leucine-rich repeats (LRR) (IPR001611 from INTERPRO), TIR domains (IPR000157 from INTERPRO), and ZU5 domains (IPR000906 from INTERPRO) []. Some DD-containing proteins are involved in the regulation of apoptosis and inflammation through their activation of caspases and NF-kappaB, which typically involves interactions with TNF (tumour necrosis factor) cytokine receptors [, ]. In humans, eight of the over 30 known TNF receptors contain DD in their cytoplasmic tails; several of these TNF receptors use caspase activation as a signalling mechanism. The DD mediates self-association of these receptors, thus giving the signal to downstream events that lead to apoptosis. Other DD-containing proteins, such as ankyrin, MyD88 and pelle, are probably not directly involved in cell death signalling. DD-containing proteins also have links to innate immunity, communicating with Toll family receptors through bipartite adapter proteins such as MyD88 [].; GO: 0005515 protein binding, 0007165 signal transduction; PDB: 3OQ9_L 3EZQ_F 1E41_A 1E3Y_A 2GF5_A 2OF5_L 3EWV_E 3G5B_A 3MOP_L 2A9I_A ....
Probab=97.76 E-value=1.7e-05 Score=61.68 Aligned_cols=76 Identities=21% Similarity=0.309 Sum_probs=61.7
Q ss_pred Hhhhhc--CCcchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy5603 23 ELGIIL--NERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIMFLK 100 (455)
Q Consensus 23 ~l~~~l--d~~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~~l~ 100 (455)
+|++++ +..++|+.||..+ .++..+|+.|+.... ...+||.++|..|..+...++||..|+..|.
T Consensus 2 ~l~~~l~~~~~~~Wk~La~~L----------g~~~~~i~~i~~~~~---~~~~~~~~~L~~W~~~~~~~at~~~L~~aL~ 68 (83)
T PF00531_consen 2 KLFDLLAEDLGSDWKRLARKL----------GLSESEIENIEEENP---DLREQTYEMLQRWRQREGPNATVDQLIQALR 68 (83)
T ss_dssp HHHHHHHHSHSTCHHHHHHHT----------TS-HHHHHHHHHHST---SHHHHHHHHHHHHHHHHGSTSSHHHHHHHHH
T ss_pred hHHHHHhhcchhhHHHHHHHh----------CcCHHHHHHHHHhCC---ChHHHHHHHHHHHHHhcCCCCcHHHHHHHHH
Confidence 577777 5589999999875 456789999997543 2569999999999877556899999999999
Q ss_pred hcccccccccc
Q psy5603 101 KAELHQAARYV 111 (455)
Q Consensus 101 ~~~l~~~~~~~ 111 (455)
+.+...+++.+
T Consensus 69 ~~~~~d~~~~i 79 (83)
T PF00531_consen 69 DIGRNDLAEKI 79 (83)
T ss_dssp HTTHHHHHHHH
T ss_pred HCCcHHHHHHH
Confidence 99998887654
No 489
>KOG2268|consensus
Probab=97.72 E-value=2.8e-05 Score=74.61 Aligned_cols=150 Identities=14% Similarity=0.135 Sum_probs=97.2
Q ss_pred CCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCc--------hhhhh-hhhHHHHHHHHHHHhhCCccce
Q psy5603 171 YPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSD--------NTEAA-MIPILLFENEVQTLSQCKHVNL 241 (455)
Q Consensus 171 ~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~E~~~l~~l~h~ni 241 (455)
++.+++.||-|--+.||.+.+.+|++.++|.-+-...+-..... ....| ........+|...|+.+.....
T Consensus 93 v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 93 VESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 44677999999999999999998999999974322111000000 00011 1234456778888888743111
Q ss_pred eeecccccCceeEEEEEeccCCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcCCCc
Q psy5603 242 LRLLGLCNNIMNCIVYEYMCNGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDENFV 321 (455)
Q Consensus 242 v~l~~~~~~~~~~lV~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~~~~ 321 (455)
++-..+....+|+|||++.|-.|.+.-+- .+.++ +...+..-|.-|.+ +|+||||.+-=||++++++.
T Consensus 173 -pVPkpiD~~RH~Vvmelv~g~Pl~~v~~v------~d~~~---ly~~lm~~Iv~la~--~GlIHgDFNEFNimv~dd~~ 240 (465)
T KOG2268|consen 173 -PVPKPIDHNRHCVVMELVDGYPLRQVRHV------EDPPT---LYDDLMGLIVRLAN--HGLIHGDFNEFNIMVKDDDK 240 (465)
T ss_pred -CCCCcccccceeeHHHhhcccceeeeeec------CChHH---HHHHHHHHHHHHHH--cCceecccchheeEEecCCC
Confidence 11122333667999999988888654221 22222 34444455566667 89999999999999999999
Q ss_pred eEEeecccccc
Q psy5603 322 PKLGDFGIVKM 332 (455)
Q Consensus 322 ~kl~DFGla~~ 332 (455)
++++||.-+..
T Consensus 241 i~vIDFPQmvS 251 (465)
T KOG2268|consen 241 IVVIDFPQMVS 251 (465)
T ss_pred EEEeechHhhc
Confidence 99999986543
No 490
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.71 E-value=0.00064 Score=68.66 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=53.5
Q ss_pred CccCcCCCeEEEEEEEcCC-cEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCC---ccceeeecccccCc
Q psy5603 176 NKLGEGQFGTVYYGKLKNG-MEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCK---HVNLLRLLGLCNNI 251 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~-~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 251 (455)
+.||.|.+..||++...+| +.|+||.-........ +.+.....++..|.+.|..+. -.++.+++.+.. .
T Consensus 32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g------~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~-~ 104 (401)
T PRK09550 32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVG------ESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE-E 104 (401)
T ss_pred eEcCCCceEEEEEEEeCCCCeEEEEEecCccccccc------ccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC-C
Confidence 5699999999999998766 4899998542211100 011222455777888887763 234555666533 5
Q ss_pred eeEEEEEeccCCC
Q psy5603 252 MNCIVYEYMCNGS 264 (455)
Q Consensus 252 ~~~lV~e~~~~gs 264 (455)
..++||||+++..
T Consensus 105 ~~~lVME~L~~~~ 117 (401)
T PRK09550 105 LAVTVMEDLSDHK 117 (401)
T ss_pred CCEEEEecCCCcc
Confidence 5689999998754
No 491
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.68 E-value=0.00028 Score=67.18 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=77.4
Q ss_pred ccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccceee-ecccccCceeEE
Q psy5603 177 KLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLLR-LLGLCNNIMNCI 255 (455)
Q Consensus 177 ~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~-l~~~~~~~~~~l 255 (455)
.+..|-.+.+|+.... +..+++|......... . ....+|..+++.+....+.+ ++.... .++
T Consensus 3 ~~~~G~tn~~y~~~~~-~~~~vlR~~~~~~~~~--~-----------~~r~~E~~~l~~l~~~g~~P~~i~~~~---~~~ 65 (256)
T TIGR02721 3 TLSGGLTNRSWRIEHP-GISFVWRPQSPVCKAL--G-----------VDRQREYQILQALSALGLAPKPILVNE---HWL 65 (256)
T ss_pred cCCCcCcCCeEEEEeC-CccEEEeeCCcccccc--c-----------CcHHHHHHHHHHHHhcCCCCceEEEeC---CEE
Confidence 3667888899998754 6788998754321100 0 01467888888875443432 333322 368
Q ss_pred EEEeccCCCHHH--------------HHhhcCC----CCCCCHHHH-HHHHHHH---------HHHHHHHHcC------C
Q psy5603 256 VYEYMCNGSLYD--------------RLARVNN----TPPLDSNKR-YSIALGV---------AEALHYLHSL------S 301 (455)
Q Consensus 256 V~e~~~~gsL~~--------------~l~~~~~----~~~l~~~~~-~~i~~~i---------~~gl~~LH~~------~ 301 (455)
||+|++|..+.. .+.+... ..+++.... ..+..++ ...+..+-.. .
T Consensus 66 v~e~i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (256)
T TIGR02721 66 LVEWLEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLP 145 (256)
T ss_pred EEEeccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCC
Confidence 999999876532 1111111 112222111 1111111 1112222111 1
Q ss_pred CCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 302 KPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 302 ~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..++|+|+.|.||++++++ +.|+||..+..
T Consensus 146 ~~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 146 LAPLHMDVHAYNLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred CeeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence 3489999999999999887 78999987654
No 492
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.62 E-value=0.0011 Score=60.38 Aligned_cols=138 Identities=16% Similarity=0.165 Sum_probs=88.3
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhh----hhhhhHHHHHHHHHHHhhCC------ccceeeec
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTE----AAMIPILLFENEVQTLSQCK------HVNLLRLL 245 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~----~~~~~~~~~~~E~~~l~~l~------h~niv~l~ 245 (455)
..||+|+.-.||.- .+.....||+.+... .........- .......++.+|+.....+. +.+|.+++
T Consensus 7 ~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~-~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 7 DLIAQGGERDCYQH--PDDPNLCIKVMRPDR-GERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred cccccCCCceEEEC--CCCCCeEEEEEcccc-ccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 67999999999974 335678999997665 1111000000 00011234566666655554 78899999
Q ss_pred ccccC-ceeEEEEEecc------CCCHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCeeecCCCCCcEEEcC
Q psy5603 246 GLCNN-IMNCIVYEYMC------NGSLYDRLARVNNTPPLDSNKRYSIALGVAEALHYLHSLSKPIIHRDVKSANVLLDE 318 (455)
Q Consensus 246 ~~~~~-~~~~lV~e~~~------~gsL~~~l~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~~~iiH~Dikp~NILl~~ 318 (455)
|+..+ ...-+|+|.+. .-+|.+++.. ..++. .. ...+-.-..||-+ .+|+.+|++|.||++..
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~----~~~~~-~~---~~~L~~f~~~l~~--~~Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKE----GGLTE-EL---RQALDEFKRYLLD--HHIVIRDLNPHNIVVQR 153 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHc----CCccH-HH---HHHHHHHHHHHHH--cCCeecCCCcccEEEEe
Confidence 98777 66678888764 3368888854 23555 33 3334444566666 67999999999999953
Q ss_pred C--C--ceEEee
Q psy5603 319 N--F--VPKLGD 326 (455)
Q Consensus 319 ~--~--~~kl~D 326 (455)
. + .+.|+|
T Consensus 154 ~~~~~~~lvlID 165 (199)
T PF10707_consen 154 RDSGEFRLVLID 165 (199)
T ss_pred cCCCceEEEEEe
Confidence 3 2 577888
No 493
>PRK05231 homoserine kinase; Provisional
Probab=97.59 E-value=0.0018 Score=63.69 Aligned_cols=32 Identities=25% Similarity=0.347 Sum_probs=27.2
Q ss_pred CCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 301 SKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 301 ~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
..++||+|++|.|||++.+...-|+||+.+..
T Consensus 186 p~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 186 PRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred CcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 35799999999999999776668999997754
No 494
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.55 E-value=0.0016 Score=63.74 Aligned_cols=161 Identities=14% Similarity=0.073 Sum_probs=86.1
Q ss_pred eHHHHHHHhcCCCCCCCCcCCCccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHh
Q psy5603 155 TFCDLERATDGFNRKPYPRRGNKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLS 234 (455)
Q Consensus 155 ~~~~l~~~t~~f~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 234 (455)
+..+|......|... .......++.|.-..+|+....+ ..+++|+.+.... ......|++++.
T Consensus 8 ~~~~l~~~l~~y~~~-~~~~i~~~~~G~~n~~y~v~t~~-~~~vLK~~~~~~~---------------~~~i~~e~~~l~ 70 (307)
T TIGR00938 8 SDEEMSSFLDGYDLG-ELLSLKGIAEGVENSNYLLTTDV-GRYILTLYEKRVK---------------AEELPFFLALTT 70 (307)
T ss_pred CHHHHHHHHHhcCCC-CceeccccCCccccceEEEEeCC-CcEEEEEecCCCC---------------HHHHHHHHHHHH
Confidence 334555554444321 12223667888888999987654 4688898653211 111334555555
Q ss_pred hCCcc--ceeeecccc-------cCceeEEEEEeccCCCHH-----------HH---HhhcCCC--CC-------CCHHH
Q psy5603 235 QCKHV--NLLRLLGLC-------NNIMNCIVYEYMCNGSLY-----------DR---LARVNNT--PP-------LDSNK 282 (455)
Q Consensus 235 ~l~h~--niv~l~~~~-------~~~~~~lV~e~~~~gsL~-----------~~---l~~~~~~--~~-------l~~~~ 282 (455)
.+... .+.+++... .++..++|++|++|.++. .. ++..... .+ ..|..
T Consensus 71 ~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~ 150 (307)
T TIGR00938 71 HLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHI 150 (307)
T ss_pred HHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHH
Confidence 55321 133333211 125668999999885532 11 1111110 00 11111
Q ss_pred HH------------HHHHHHHHHHHHHHc-----CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 283 RY------------SIALGVAEALHYLHS-----LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 283 ~~------------~i~~~i~~gl~~LH~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.. .....+...+.++.. ...+++|+|+++.||++++++...|+||+.+..
T Consensus 151 ~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~ 217 (307)
T TIGR00938 151 LAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFACT 217 (307)
T ss_pred HHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeecccccC
Confidence 00 001123334555532 236799999999999999988788999997653
No 495
>cd08797 Death_NFkB1_p105 Death domain of the Nuclear Factor-KappaB1 precursor protein p105. Death Domain (DD) of the Nuclear Factor-KappaB1 (NF-kB1) precursor protein p105. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). NF-kB1 (or p50) is produced from the processing of the precursor protein p105, which contains ANK repeats and a C-terminal DD in addition to the RHD. It is regulated by the classical (or canonical) NF-kB pathway. In the cytosol, p50 forms an inactive complex with RelA (or p65) and the Inhibitor of NF-kB (IkB). Activation is triggered by the phosphorylation and degradation of IkB, resulting in the active DNA-binding p50-RelA dimer to migrate to the nucleus. The classical pathway regulates the majority of genes activated by NF-kB including those encod
Probab=97.54 E-value=0.00024 Score=53.27 Aligned_cols=71 Identities=15% Similarity=0.255 Sum_probs=55.7
Q ss_pred HHHHhhhhcCCc---chHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHHH
Q psy5603 20 VVHELGIILNER---DDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLI 96 (455)
Q Consensus 20 ~~~~l~~~ld~~---~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~ 96 (455)
|+.+||..||+. -.|+.+|...--+ ..+-.|+ .--|||..||+-|-.. ..+|.+|+
T Consensus 1 ~rqkLc~~Ld~p~~~g~Wr~LA~kL~l~-----------~l~~~f~-------~~pSPt~~LLd~~E~~---~G~l~~L~ 59 (76)
T cd08797 1 VKQQLYKLLESPDPDKNWETLAQKLGLG-----------ILNNAFR-------LSPSPSKTLLDNYEVS---GGTVRELL 59 (76)
T ss_pred ChhHHHHHhCCCCCCCCHHHHHHHHCch-----------hHHHHHh-------CCCCcHHHHHHHHhcC---CCCHHHHH
Confidence 578999999953 3599999986533 2333343 4679999999999987 68999999
Q ss_pred HHHHhcccccccccc
Q psy5603 97 MFLKKAELHQAARYV 111 (455)
Q Consensus 97 ~~l~~~~l~~~~~~~ 111 (455)
..|.......+.+++
T Consensus 60 ~aL~~mG~~eav~~L 74 (76)
T cd08797 60 AALKRMGYTEAIEVI 74 (76)
T ss_pred HHHHHhCcHHHHHHH
Confidence 999999887777654
No 496
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.47 E-value=0.0017 Score=63.22 Aligned_cols=140 Identities=16% Similarity=0.119 Sum_probs=80.8
Q ss_pred CccCcCCCeEEEEEEEcCCcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCccc--eeeecccc-----
Q psy5603 176 NKLGEGQFGTVYYGKLKNGMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVN--LLRLLGLC----- 248 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~----- 248 (455)
..|..|....+|+.... +..+++|+... .. ......|+.++..+.+.+ +.+++...
T Consensus 20 ~~i~~G~~n~~y~v~~~-~~~~vLr~~~~-~~---------------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~ 82 (296)
T cd05153 20 EGISAGIENTNYFVTTD-SGRYVLTLFEK-VS---------------AEELPFFLALLDHLAERGLPVPRPIADRDGEYL 82 (296)
T ss_pred ecccCccccceEEEEeC-CCcEEEEEcCC-CC---------------hHhccHHHHHHHHHHHCCCCCCccccCCCCcEe
Confidence 56888888899998765 45789998753 11 112445666666664322 33443321
Q ss_pred --cCceeEEEEEeccCCCHHH-----------HH---hhcCC--C------CCCCHHHHH----------HHHHHHHHHH
Q psy5603 249 --NNIMNCIVYEYMCNGSLYD-----------RL---ARVNN--T------PPLDSNKRY----------SIALGVAEAL 294 (455)
Q Consensus 249 --~~~~~~lV~e~~~~gsL~~-----------~l---~~~~~--~------~~l~~~~~~----------~i~~~i~~gl 294 (455)
.++..++|++|++|.++.. .| +.... . ....|.... .....+..++
T Consensus 83 ~~~~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 162 (296)
T cd05153 83 SELAGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADEL 162 (296)
T ss_pred eeeCCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHH
Confidence 1245578999999877521 11 11100 0 011221111 0111223344
Q ss_pred HHHHc-----CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q psy5603 295 HYLHS-----LSKPIIHRDVKSANVLLDENFVPKLGDFGIVKM 332 (455)
Q Consensus 295 ~~LH~-----~~~~iiH~Dikp~NILl~~~~~~kl~DFGla~~ 332 (455)
.++.+ ...+++|||+.|.|||+++++.+.|+||+.+..
T Consensus 163 ~~l~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 163 ARQDAFDPSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred HHHHhhhhhcCCCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 44442 224699999999999999988889999997654
No 497
>cd01670 Death Death Domain: a protein-protein interaction domain. Death Domains (DDs) are protein-protein interaction domains found in a variety of domain architectures. Their common feature is that they form homodimers by self-association or heterodimers by associating with other members of the DD superfamily including CARD (Caspase activation and recruitment domain), DED (Death Effector Domain), and PYRIN. Structural analysis of DD-DD complexes show that the domains interact with each other in many different ways. DD-containing proteins serve as adaptors in signaling pathways and they can recruit other proteins into signaling complexes. In mammals, they are prominent components of the programmed cell death (apoptosis) pathway and are found in a number of other signaling pathways. In invertebrates, they are involved in transcriptional regulation of zygotic patterning genes in insect embryogenesis, and are components of the ToII/NF-kappaB pathway, a conserved innate immune pathway in a
Probab=97.46 E-value=0.0002 Score=54.99 Aligned_cols=69 Identities=22% Similarity=0.332 Sum_probs=58.6
Q ss_pred HHHhhhhcCCcchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHHHHHHH
Q psy5603 21 VHELGIILNERDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIMFLK 100 (455)
Q Consensus 21 ~~~l~~~ld~~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~~l~ 100 (455)
+..+|+.|. ++|++||-.+. ++..+|+.|+.... ...+|+.++|..|..+....+|+..|+..|.
T Consensus 2 ~~~ia~~lg--~~W~~la~~Lg----------l~~~~I~~i~~~~~---~~~~~~~~mL~~W~~~~~~~at~~~L~~aL~ 66 (79)
T cd01670 2 LDKLAKKLG--KDWKKLARKLG----------LSDGEIDQIEEDNP---RVREQAYQLLLKWEEREGDNATVGNLIEALR 66 (79)
T ss_pred HHHHHHHHh--hHHHHHHHHhC----------CCHHHHHHHHHhCC---CHHHHHHHHHHHHHhccCcCcHHHHHHHHHH
Confidence 467888888 99999998754 45789999997754 3679999999999988767899999999999
Q ss_pred hccc
Q psy5603 101 KAEL 104 (455)
Q Consensus 101 ~~~l 104 (455)
+..+
T Consensus 67 ~~~~ 70 (79)
T cd01670 67 EIGR 70 (79)
T ss_pred HcCH
Confidence 9887
No 498
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=97.43 E-value=0.00081 Score=64.87 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=25.4
Q ss_pred CeeecCCCCCcEEEcCCCc-eEEeeccccccc
Q psy5603 303 PIIHRDVKSANVLLDENFV-PKLGDFGIVKMS 333 (455)
Q Consensus 303 ~iiH~Dikp~NILl~~~~~-~kl~DFGla~~~ 333 (455)
.++|+|++|.|||+++++. .-|+||+.+...
T Consensus 186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~iG 217 (276)
T cd05152 186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKVG 217 (276)
T ss_pred eeEeCCCCCCcEEEeCCCCEEEEECcHhcccC
Confidence 4899999999999997555 469999976643
No 499
>cd08798 Death_NFkB2_p100 Death domain of the Nuclear Factor-KappaB2 precursor protein p100. Death Domain (DD) of the Nuclear Factor-KappaB2 (NF-kB2) precursor protein p100. The NF-kB family of transcription factors play a central role in cardiovascular growth, stress response, and inflammation by controlling the expression of a network of different genes. There are five NF-kB proteins, all containing an N-terminal REL Homology Domain (RHD). NF-kB2 (or p52) is produced from the processing of the precursor protein p100, which contains ANK repeats and a C-terminal DD in addition to the RHD. It is regulated by the non-canonical NF-kB pathway. The p100 precursor is cytosolic and interacts with RelB. Upon phosphorylation by IKKalpha, p100 is processed to its 52kDa active, DNA binding form and the p52/RelB complex is translocated into the nucleus. The non-canonical pathway plays a role in adaptive immunity and lymphorganogenesis. In general, DDs are protein-protein interaction domains found i
Probab=97.37 E-value=0.00051 Score=51.48 Aligned_cols=70 Identities=17% Similarity=0.319 Sum_probs=55.3
Q ss_pred HHHhhhhcCC---cchHHHHHHhhhcCCCCCCCCCcchHHHHHHHHhcccCCCCCCchHHHHHhhhcCCCCCCCHHHHHH
Q psy5603 21 VHELGIILNE---RDDWKKIMSIVTVDCDPLKPLKYSAKDIKIVERAGKRNFPERGCTDIFLDEWGTSGRRRPRLSDLIM 97 (455)
Q Consensus 21 ~~~l~~~ld~---~~~w~~~~~~i~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~s~t~~ll~~w~~~~~~~~~~~~l~~ 97 (455)
+++||..||. +.+|+.+|...--+ ..+-.|+ .--|||..||+-|-.+ ..+|.+|+.
T Consensus 2 ~qkLc~~Ld~p~~g~dW~~LA~kL~l~-----------~l~~~f~-------~~~SPt~~LLd~yE~~---~G~l~~L~~ 60 (76)
T cd08798 2 LQRLEQLLNDTQTDVPWMELAERLGLQ-----------SLVDTYK-------PTQSPPGSLLRSYELA---GGPLQGLIE 60 (76)
T ss_pred HHHHHHHhcCCCCCCCHHHHHHHHCcc-----------hHHHHHh-------CCCCchHHHHHHhhcc---CCCHHHHHH
Confidence 6799999994 56899999986532 2344444 3569999999999988 679999999
Q ss_pred HHHhcccccccccc
Q psy5603 98 FLKKAELHQAARYV 111 (455)
Q Consensus 98 ~l~~~~l~~~~~~~ 111 (455)
.|.......+.+++
T Consensus 61 aL~~mG~~eav~~l 74 (76)
T cd08798 61 ALQDMGLREGVRLL 74 (76)
T ss_pred HHHHhChHHHHHHh
Confidence 99998887777643
No 500
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.33 E-value=0.0013 Score=64.22 Aligned_cols=74 Identities=19% Similarity=0.294 Sum_probs=46.1
Q ss_pred CccCcCCCeEEEEEEEcC-------CcEEEEEEeecccCcCCCCCchhhhhhhhHHHHHHHHHHHhhCCcccee-eeccc
Q psy5603 176 NKLGEGQFGTVYYGKLKN-------GMEIAVKTLENNANYSSSNSDNTEAAMIPILLFENEVQTLSQCKHVNLL-RLLGL 247 (455)
Q Consensus 176 ~~LG~G~fg~Vy~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv-~l~~~ 247 (455)
+.|..|-...||+....+ ++.+++|........ .....+|.+++..+....+. +++++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~--------------~~~r~~E~~~~~~l~~~g~~P~~~~~ 69 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL--------------LIDRERELVVFARLSERNLGPKLYGI 69 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc--------------eechHHHHHHHHHHHhCCCCCceEEE
Confidence 456677777999988654 478999997543211 11145677777777543333 34444
Q ss_pred ccCceeEEEEEeccCCCHH
Q psy5603 248 CNNIMNCIVYEYMCNGSLY 266 (455)
Q Consensus 248 ~~~~~~~lV~e~~~~gsL~ 266 (455)
+.+ .+|++|++|.++.
T Consensus 70 ~~~---~~v~e~i~G~~l~ 85 (302)
T cd05156 70 FPN---GRIEEFIPSRTLT 85 (302)
T ss_pred eCC---CchhheeCCCcCC
Confidence 432 3589999887764
Done!