BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5605
(152 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P39018|RS19A_DROME 40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a
PE=2 SV=3
Length = 156
Score = 184 bits (466), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/125 (65%), Positives = 104/125 (83%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
K+GK+KVP+ +DIVK+AKFKELAPYDPDWFY RCA++ RH+Y RSP GV ++TKI+GGRK
Sbjct: 24 KTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRK 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PSHFCR++ ARKALQALE ++EK DGGRK++S G+RD+DRIA QI ++
Sbjct: 84 RNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQIVFKQR 143
Query: 133 EAALQ 137
+AA Q
Sbjct: 144 DAAKQ 148
>sp|Q8ITC3|RS19_ARGIR 40S ribosomal protein S19 OS=Argopecten irradians GN=RPS19 PE=2
SV=1
Length = 144
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 75/116 (64%), Positives = 96/116 (82%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGKMK+PEW I+K +KF EL+PYD DWFYTR A++ RH+Y+RSP GV +TKI+G RK
Sbjct: 23 KSGKMKIPEWATIIKLSKFNELSPYDEDWFYTRAASICRHLYIRSPAGVGALTKIYGDRK 82
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIR 128
RNG PSH+CRSSGSVAR+ LQALE ++EK +GGRK+TS G++D+DRIAAQ++
Sbjct: 83 RNGTVPSHYCRSSGSVARRVLQALETQKLVEKDANGGRKLTSQGQKDLDRIAAQVK 138
>sp|Q5R8M9|RS19_PONAB 40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3
Length = 145
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 96/121 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEWVD VK AK KELAPYD +WFYTR A+ ARH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PSHF R S SVAR+ LQALE + ++EK DGGRK+T G+RD+DRIA Q+ + K
Sbjct: 84 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|P39019|RS19_HUMAN 40S ribosomal protein S19 OS=Homo sapiens GN=RPS19 PE=1 SV=2
Length = 145
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 96/121 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEWVD VK AK KELAPYD +WFYTR A+ ARH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PSHF R S SVAR+ LQALE + ++EK DGGRK+T G+RD+DRIA Q+ + K
Sbjct: 84 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|Q32PD5|RS19_BOVIN 40S ribosomal protein S19 OS=Bos taurus GN=RPS19 PE=2 SV=3
Length = 145
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 96/121 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEWVD VK AK KELAPYD +WFYTR A+ ARH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PSHF R S SVAR+ LQALE + ++EK DGGRK+T G+RD+DRIA Q+ + K
Sbjct: 84 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|P17074|RS19_RAT 40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3
Length = 145
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 96/121 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEWVD VK AK KELAPYD +WFYTR A+ ARH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PSHF R S SVAR+ LQALE + ++EK DGGRK+T G+RD+DRIA Q+ + K
Sbjct: 84 RNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|Q9CZX8|RS19_MOUSE 40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3
Length = 145
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 77/121 (63%), Positives = 96/121 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEWVD VK AK KELAPYD +WFYTR A+ ARH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PSHF R S SVAR+ LQALE + ++EK DGGRK+T G+RD+DRIA Q+ + K
Sbjct: 84 RNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|Q94613|RS19_MYAAR 40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1
Length = 149
Score = 169 bits (428), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 69/115 (60%), Positives = 95/115 (82%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGKMKVPEW D VK+ FKEL+PY+PDW++ R A++ RH+Y+RSP G+ + KI+GGR+
Sbjct: 23 KSGKMKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRR 82
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQI 127
R G PSHFC+++GS++R+ LQ+LE + I+EK +GGR++TS GRRD+DRIAAQI
Sbjct: 83 RRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQI 137
>sp|Q29308|RS19_PIG 40S ribosomal protein S19 (Fragment) OS=Sus scrofa GN=RPS19 PE=2
SV=3
Length = 136
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 74/113 (65%), Positives = 90/113 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEWVD VK A KELAPYD +WFYTR A+ ARH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPEWVDTVKLAXHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAA 125
RNGV PSHF R S SVAR+ LQALE + ++EK DGGRK+T G+RD+DRIA
Sbjct: 84 RNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAG 136
>sp|Q90YQ4|RS19_ICTPU 40S ribosomal protein S19 OS=Ictalurus punctatus GN=rps19 PE=2 SV=1
Length = 147
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 73/122 (59%), Positives = 94/122 (77%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVP+WVDIVK AK KELAP D +WFY R A+ RH+Y+R VGV ++ KI+GGRK
Sbjct: 26 KSGKLKVPDWVDIVKLAKHKELAPCDDNWFYIRAASTVRHLYLRGGVGVGSMIKIYGGRK 85
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGVCPSHF S +VARK LQALE + ++EK +GGR++T G RD+DRIA Q+ + K
Sbjct: 86 RNGVCPSHFSVGSKNVARKVLQALEALKMVEKDPNGGRRLTPQGTRDLDRIAGQVAAASK 145
Query: 133 EA 134
++
Sbjct: 146 KS 147
>sp|P40978|RS19_ORYSJ 40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A
PE=3 SV=1
Length = 146
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 94/118 (79%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
+SGKM++PEWVDIVK+A+FKEL PYDPDW+YTR A++AR IY+R +GV KI+GGR+
Sbjct: 27 RSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQ 86
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVS 130
RNG P HFC+SSG+++R LQ L+++ II+ GGR ITS GRRD+D++A ++ V+
Sbjct: 87 RNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRVDVT 144
>sp|Q9Y0H3|RS19_MYXGL 40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1
Length = 145
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 72/121 (59%), Positives = 94/121 (77%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+K P+WVD VK K KELAP+D DW+Y R A++ARH+YMR VGV +TKI+GGR+
Sbjct: 24 KSGKLKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNG PSH+ R S +VARK LQ+LE + ++EK +GGR++TS G+RDMDRIA Q+ V K
Sbjct: 84 RNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQVVVLSK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|Q9DFR5|RS19_GILMI 40S ribosomal protein S19 OS=Gillichthys mirabilis GN=rps19 PE=2
SV=1
Length = 147
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 93/121 (76%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVP+WVD+VK + KELAP D +WFY R A+ RH+Y+R GV ++TKI+GGR+
Sbjct: 24 KSGKLKVPDWVDLVKLGRHKELAPSDENWFYIRAASTVRHLYLRGGAGVGSMTKIYGGRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGVCP+H+ S +VARK LQALE + +IEK +GGR++T+ G RD+DRIA Q+ + K
Sbjct: 84 RNGVCPAHYSEGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVSAASK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|P61155|RS19_PAGMA 40S ribosomal protein S19 OS=Pagrus major GN=rps19 PE=2 SV=1
Length = 146
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 92/121 (76%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVP+WVD+VK K KELAP D +WFY R A+ RH+Y+R GV ++TKI+G R+
Sbjct: 24 KSGKLKVPDWVDLVKLGKHKELAPSDENWFYIRSASTVRHLYLRGGAGVGSMTKIYGSRQ 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGVCP+H+ S +VARK LQALE + +IEK +GGR++T+ G RD+DRIA Q+ + K
Sbjct: 84 RNGVCPAHYSVGSKNVARKVLQALELLKMIEKDPNGGRRLTAQGTRDLDRIAGQVAAANK 143
Query: 133 E 133
+
Sbjct: 144 K 144
>sp|Q7KS38|RS19B_DROME 40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b
PE=1 SV=3
Length = 155
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 70/121 (57%), Positives = 89/121 (73%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+ VPE +K+ KFKE AP D DWFYTRCA++ RH+Y+RSP GV TK++ GRK
Sbjct: 24 KSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRK 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
RNGV PS CRSS RKALQALE N++E+ DGGRK+T G+R++DRIA +I ++
Sbjct: 84 RNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKIVAKQR 143
Query: 133 E 133
E
Sbjct: 144 E 144
>sp|Q8T5Z4|RS19_BRABE 40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2
SV=1
Length = 147
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 69/122 (56%), Positives = 91/122 (74%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+K+PEWVD+VK+A KELAPYDPDWFY R A+ ARH+YMR VGV + KI+GGRK
Sbjct: 25 KSGKLKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRK 84
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
R G P+ F S V+R LQ+LE + ++EK GGR++TS G+RD+DRIA Q+ + +
Sbjct: 85 RRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQVATAMR 144
Query: 133 EA 134
+A
Sbjct: 145 KA 146
>sp|Q9SGA6|RS191_ARATH 40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2
SV=1
Length = 143
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 88/117 (75%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
+SGK+++P W DIVK+ K KELAPYDPDW+Y R A++AR +Y+R +GV +I+GG K
Sbjct: 25 RSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSK 84
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRV 129
RNG P HFC+SSG +AR LQ LE +NI+E GGR+ITS G+RD+D++A +I V
Sbjct: 85 RNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAV 141
>sp|P39698|RS19S_ASCSU 40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1
Length = 150
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 93/130 (71%), Gaps = 1/130 (0%)
Query: 4 VSYIGFRPSKSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKT 63
V YI KSGK+KVPEW D+VK KELAP D DW+Y R A++AR +Y+RSP GV
Sbjct: 16 VRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGA 75
Query: 64 VTKIFGGRKRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDG-GRKITSHGRRDMDR 122
+ +++GG KR GV P+HF R+SGSV RKALQ LE + +EK DG GR +T GR+D+DR
Sbjct: 76 LRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDR 135
Query: 123 IAAQIRVSKK 132
IA+Q+R + K
Sbjct: 136 IASQMRQNTK 145
>sp|P58234|RS19A_SCHPO 40S ribosomal protein S19-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps19a PE=2 SV=1
Length = 144
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 89/121 (73%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
+SGKM P+W+DIVK+ KELAPYDPDW+Y R AA+ARHIY+R VGV + K++GG
Sbjct: 24 RSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSV 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
G+ PSH SGSV RK +Q+LE++ ++EKSD+GGR+I+ G+RD+DRIA + +
Sbjct: 84 NRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIAYSLLEEES 143
Query: 133 E 133
E
Sbjct: 144 E 144
>sp|P79016|RS19B_SCHPO 40S ribosomal protein S19-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps19b PE=3 SV=2
Length = 143
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 64/112 (57%), Positives = 86/112 (76%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
+SGKM P+W+DIVK+ KELAPYDPDW+Y R AA+ARHIY+R VGV + K++GG
Sbjct: 24 RSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAIARHIYLRKQVGVGRLCKVYGGSV 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIA 124
G+ PSH SGSV RK +Q+LE++ ++EKSD+GGR+I+ G+RD+DRIA
Sbjct: 84 NRGMRPSHHRDGSGSVQRKVVQSLEKIGVLEKSDNGGRRISQQGQRDLDRIA 135
>sp|Q9FNP8|RS193_ARATH 40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2
SV=1
Length = 143
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 64/115 (55%), Positives = 87/115 (75%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
+SGK+++P W DIVK+ K KELAPYDPDW+Y R A++AR +Y+R +GV +I+GG K
Sbjct: 25 RSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSK 84
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQI 127
RNG P HFC+SSG VAR LQ L+ +NI++ GGRKITS G+RD+D++A +I
Sbjct: 85 RNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRI 139
>sp|Q9LF30|RS192_ARATH 40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2
SV=1
Length = 143
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 63/115 (54%), Positives = 87/115 (75%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
+SGK+++P W DIVK+ + KELAPYDPDW+Y R A++AR IY+R +GV +I+GG K
Sbjct: 25 RSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSK 84
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQI 127
RNG P HFC+SSG +AR LQ LE ++I+E GGR+ITS G+RD+D++A +I
Sbjct: 85 RNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRI 139
>sp|O18650|RS19_CAEEL 40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2
SV=1
Length = 146
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+KVPEW D+VK KELAP DPDWFYTR A+LARH+Y R P G+ K++GG K
Sbjct: 25 KSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFR-PAGIGAFKKVYGGNK 83
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDG-GRKITSHGRRDMDRIAAQIRVSK 131
R GV P+HF S+G+ RKA+Q LE++ +EK DG GR ++ GR+D+DRIA +R S
Sbjct: 84 RRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIATSLRSSG 143
Query: 132 KEA 134
++A
Sbjct: 144 QQA 146
>sp|P24494|RS19G_ASCSU 40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1
Length = 148
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/126 (52%), Positives = 89/126 (70%), Gaps = 1/126 (0%)
Query: 4 VSYIGFRPSKSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKT 63
V +I KSGK+KVPEW D+ K KELAP + DW+Y R A++AR +Y+RSP GV
Sbjct: 16 VQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDA 75
Query: 64 VTKIFGGRKRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDG-GRKITSHGRRDMDR 122
+ ++GG KR GV P+HF ++SGSV RKALQ LE + ++K DG GR +T GR+D+DR
Sbjct: 76 LRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDR 135
Query: 123 IAAQIR 128
IA+Q+R
Sbjct: 136 IASQMR 141
>sp|P07281|RS19B_YEAST 40S ribosomal protein S19-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS19B PE=1 SV=2
Length = 144
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPD-WFYTRCAALARHIYMRSPVGVKTVTKIFGGR 71
+ GK++VP +VDIVK++ E+ P D + WFY R A++ARHIYMR VGV + K++GG
Sbjct: 24 RQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGA 83
Query: 72 KRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQ 126
K GV P +SGS+ RK LQALE++ I+E S GGR+I+ +G+RD+DRIAAQ
Sbjct: 84 KSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138
>sp|P07280|RS19A_YEAST 40S ribosomal protein S19-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS19A PE=1 SV=2
Length = 144
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 1/115 (0%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPD-WFYTRCAALARHIYMRSPVGVKTVTKIFGGR 71
+ GK++VP +VDIVK++ E+ P D + WFY R A++ARHIYMR VGV + K++GG
Sbjct: 24 RQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGA 83
Query: 72 KRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQ 126
K GV P +SGS+ RK LQALE++ I+E S GGR+I+ +G+RD+DRIAAQ
Sbjct: 84 KSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138
>sp|P27073|RS19_EMENI 40S ribosomal protein S19 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rps19 PE=3
SV=1
Length = 148
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 4 VSYIGFRPSKSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKT 63
V+Y F + GK+ +P WVD VK++ EL P D DW+Y R AA+ARHIY+R VGV
Sbjct: 16 VAYAAF-LKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGR 74
Query: 64 VTKIFGGRKRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDD-GGRKITSHGRRDMDR 122
+ K+ G K G P+H +SG+V RK LQ+LE++ ++E+ ++ GGR+IT G+RD+DR
Sbjct: 75 LRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDR 134
Query: 123 IA 124
IA
Sbjct: 135 IA 136
>sp|Q54X51|RS19_DICDI 40S ribosomal protein S19 OS=Dictyostelium discoideum GN=rps19 PE=3
SV=1
Length = 148
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 79/116 (68%), Gaps = 1/116 (0%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
K+G++++P+W DI K+A ++EL P +PDW Y R A LAR +Y+R GV T ++FGG +
Sbjct: 26 KTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLARKVYIRGGDGVATYRRVFGGNR 85
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSD-DGGRKITSHGRRDMDRIAAQI 127
RNGV P+HF +G R L+ L+ + +IE GGR IT+ GRRD+DRIA QI
Sbjct: 86 RNGVRPNHFADVNGGNIRYCLKQLQNLKVIETDAVKGGRTITATGRRDLDRIAKQI 141
>sp|O15631|RS19_ENTHI 40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2
SV=1
Length = 148
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
KSGK+++PEWVD VK+ KELAP +PDW Y R AA+AR +Y+ + +GV + + +G +
Sbjct: 25 KSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQY 84
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
PSH SG V R LQ LE++ I+ K GR +T GR+DMD+IA++ + K
Sbjct: 85 NKHYYPSHRTLGSGKVNRYILQQLEKMGIVGKI-QSGRSLTKEGRKDMDKIASKFIRNMK 143
Query: 133 EAALQ 137
LQ
Sbjct: 144 PKLLQ 148
>sp|P54057|RS19E_METJA 30S ribosomal protein S19e OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=rps19e PE=3 SV=1
Length = 148
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/116 (44%), Positives = 74/116 (63%), Gaps = 1/116 (0%)
Query: 13 KSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRK 72
K + VPEWVD VK+ +E P DW+Y RCA++ R IY+ PVGV + +GGRK
Sbjct: 21 KEMNIGVPEWVDFVKTGVSRERRPDQDDWWYIRCASILRKIYIYGPVGVSRLRTAYGGRK 80
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIR 128
G P HF + SG++ RKALQ LE++ ++EK+ + GR +T GR +D IA ++R
Sbjct: 81 NRGHEPEHFYKGSGNIIRKALQELEKLGLVEKTPE-GRVVTPKGRSFLDNIAKEVR 135
>sp|O27653|RS19E_METTH 30S ribosomal protein S19e OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=rps19e PE=3 SV=1
Length = 145
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 74/113 (65%), Gaps = 1/113 (0%)
Query: 16 KMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNG 75
K+K PEWV+ VK+ KE P +PDW+Y R AAL R +Y+ PVGV ++ +GG+K G
Sbjct: 25 KVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRG 84
Query: 76 VCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIR 128
P F R SG++ R+ALQ LE+ +I K ++ GR IT GR +D+ AA+++
Sbjct: 85 SRPEKFRRGSGAIIRRALQQLEESGLI-KREENGRVITPEGRSFLDKAAAEVK 136
>sp|Q9V0G8|RS19E_PYRAB 30S ribosomal protein S19e OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps19e PE=1 SV=1
Length = 150
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 70/118 (59%)
Query: 16 KMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNG 75
++K PEW VK+ + KE P DW+Y R A++ R +Y+ PVG++ + +GGRK G
Sbjct: 25 EIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYLDGPVGIERLRTYYGGRKNRG 84
Query: 76 VCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKKE 133
P F ++ GS+ RKALQ LE +EK GR IT GR +D+IA +++ +E
Sbjct: 85 HAPERFYKAGGSIIRKALQQLEAAGFVEKVPGKGRVITPKGRSFLDKIATELKKELEE 142
>sp|O59041|RS19E_PYRHO 30S ribosomal protein S19e OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps19e PE=3 SV=1
Length = 150
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 70/118 (59%)
Query: 16 KMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNG 75
++K PEW VK+ + KE P DW+Y R A++ R +Y+ PVG++ + +GGRK G
Sbjct: 25 EIKPPEWAPFVKTGRHKERLPEQEDWWYYRVASILRRVYIDGPVGIERLRTYYGGRKNRG 84
Query: 76 VCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKKE 133
P F ++ GS+ RKALQ LE IEK GR +T GR +D+IA +++ +E
Sbjct: 85 HAPERFYKAGGSIIRKALQQLEAAGFIEKVPGKGRVVTPKGRSFLDKIATELKKELEE 142
>sp|O28210|RS19E_ARCFU 30S ribosomal protein S19e OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=rps19e PE=3 SV=1
Length = 147
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 20 PEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNGVCPS 79
PEW VK+ KE +P DW+Y R A++ R +Y+ PVG++ + +GGRKR G P
Sbjct: 27 PEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRVYIDGPVGIERLRTFYGGRKRRGSKPP 86
Query: 80 HFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIR 128
F + SG++ R AL LEQ+ ++K+ + GR +T GR +D++A +++
Sbjct: 87 KFRKGSGAIVRNALHQLEQLGFVKKTRE-GRVVTPMGRSFLDKVATELK 134
>sp|Q9YD22|RS19E_AERPE 30S ribosomal protein S19e OS=Aeropyrum pernix (strain ATCC 700893
/ DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=rps19e
PE=3 SV=1
Length = 153
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Query: 12 SKSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMR-SPVGVKTVTKIFGG 70
K ++K P W K+ KE P D DW+Y R A++ R +Y P+G++T I+GG
Sbjct: 22 EKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILRKLYKSPEPIGIETFRTIYGG 81
Query: 71 RKRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQI 127
R+ G P HF ++ GSV RK LQ LE+ ++ K GR I+ GR +D A +I
Sbjct: 82 RQNRGSAPEHFRKAGGSVPRKILQQLEEAGLVVKVPGRGRTISPAGRSLLDTTAREI 138
>sp|P19952|RS19E_HALMA 30S ribosomal protein S19e OS=Haloarcula marismortui (strain ATCC
43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rps19e PE=1
SV=3
Length = 153
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 4/128 (3%)
Query: 17 MKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFG----GRK 72
++ P+W + K+ +EL P D++ R A+L R + + PVGV + +G G
Sbjct: 26 IEAPDWAEFTKTGVDRELPPEQEDFWTRRAASLLRKVAVDGPVGVNALRSEYGTSKQGTT 85
Query: 73 RNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKK 132
R V P + SG++ R ALQ LE +E S++ GR++T GR +D A +
Sbjct: 86 RYRVRPHQKTKGSGNIIRTALQQLEDAGYVETSENDGRRVTGDGRSLLDDTAGDLLTELD 145
Query: 133 EAALQALA 140
L+ A
Sbjct: 146 RPELERYA 153
>sp|Q9HM21|RS19E_THEAC 30S ribosomal protein S19e OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=rps19e PE=3 SV=1
Length = 150
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 4 VSYIGFRPSKSGKMKVPEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKT 63
++Y+ + K+ P+W VK+ +E +P + DW Y R AA+ R +Y+ +G+
Sbjct: 13 INYVSEKLKSEKKIAEPDWSKYVKTGISREKSPVNRDWIYVRAAAMLRKLYINGYLGISR 72
Query: 64 VTKIFGGRKRNGVCPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRI 123
++ +GG+ G H + S S+ R LE+ ++K+ GR ++ G +D
Sbjct: 73 MSSEYGGKVDRGSKRYHAAQGSRSIIRYLFHELEKAGYVQKTPK-GRSLSPQGMSLLDNA 131
Query: 124 AAQI--RVSKKEAALQAL 139
+ I ++++K+ A Q
Sbjct: 132 SKDIIKQLAEKDPAFQKF 149
>sp|Q97CU4|RS19E_THEVO 30S ribosomal protein S19e OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=rps19e PE=3 SV=1
Length = 150
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 20 PEWVDIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNGVCPS 79
P WV VK+ KE P DW Y R A++ R +Y+ +G+ ++ +GG+ G
Sbjct: 29 PNWVKFVKTGVSKEKPPLQDDWIYVRAASMLRKLYINGYLGISRMSSEYGGKVDRGSKRY 88
Query: 80 HFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQI 127
H S S+ R LE +++K+ GR ++ G +D + +I
Sbjct: 89 HAASGSRSITRFLFHELESAGLVQKTQK-GRSLSPQGMSLLDNASKEI 135
>sp|Q8SQS8|RS19_ENCCU 40S ribosomal protein S19 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPS19 PE=1 SV=1
Length = 137
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 24 DIVKSAKFKELAPYDPDWFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNGVCPSHFCR 83
DI+K+ + +E AP + DW++TR A++ R I ++ V + + K +G K G PS +
Sbjct: 34 DIMKTGEGREQAPIEEDWYFTRMASIVRQISIKGAVTSEFLAKRYGSLKNRGCRPSKYVG 93
Query: 84 SSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIR 128
+ + L+ L+ + I ++ +T G+ + I ++R
Sbjct: 94 AYPEIGESVLENLKNMGWI--NEHPKDMLTEKGKTIVREIIEKVR 136
>sp|C5BCF7|TGT_EDWI9 Queuine tRNA-ribosyltransferase OS=Edwardsiella ictaluri (strain
93-146) GN=tgt PE=3 SV=1
Length = 379
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 77 CPSHFCRSSGSVARKALQALEQVNIIEKSDDGGRKITSHGRRDMDRIAAQIRVSKKEAAL 136
C + CR+ +R L L++ N I G R T H R R+ A +R + +E L
Sbjct: 302 CDCYTCRN---YSRAYLHHLDRCNEIL----GARLNTIHNLRYYQRLMAALRQAIEEGKL 354
Query: 137 QALAA-----QGITVVPTGA 151
+ AA +G TV P GA
Sbjct: 355 ERFAADFYGRRGRTVPPLGA 374
>sp|Q2N9D6|RS11_ERYLH 30S ribosomal protein S11 OS=Erythrobacter litoralis (strain
HTCC2594) GN=rpsK PE=3 SV=1
Length = 129
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 105 SDDGGRKITSHGRRDMDRIAAQIRVSKKEAALQALAAQGITVV 147
+DD GRK HG R ++ + + S +E+AL+AL A G T+
Sbjct: 67 ADDAGRKAAEHGVRTLE-VEVKGPGSGRESALRALQAVGFTIT 108
>sp|B1Z770|RS11_METPB 30S ribosomal protein S11 OS=Methylobacterium populi (strain ATCC
BAA-705 / NCIMB 13946 / BJ001) GN=rpsK PE=3 SV=1
Length = 129
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 105 SDDGGRKITSHGRRDMDRIAAQIRVSKKEAALQALAAQGITVV 147
++D GRK HG R ++ + S +E+AL+AL A G TV
Sbjct: 67 AEDAGRKAAEHGMRTLE-VEVSGPGSGRESALRALQAAGFTVT 108
>sp|B0UHU6|RS11_METS4 30S ribosomal protein S11 OS=Methylobacterium sp. (strain 4-46)
GN=rpsK PE=3 SV=1
Length = 129
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 105 SDDGGRKITSHGRRDMDRIAAQIRVSKKEAALQALAAQGITVV 147
++D GRK HG R ++ + S +E+AL+AL A G TV
Sbjct: 67 AEDAGRKAAEHGMRTLE-VEVSGPGSGRESALRALQAAGFTVT 108
>sp|B8IT34|RS11_METNO 30S ribosomal protein S11 OS=Methylobacterium nodulans (strain
ORS2060 / LMG 21967) GN=rpsK PE=3 SV=1
Length = 129
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 105 SDDGGRKITSHGRRDMDRIAAQIRVSKKEAALQALAAQGITVV 147
++D GRK HG R ++ + S +E+AL+AL A G TV
Sbjct: 67 AEDAGRKAAEHGMRTLE-VEVSGPGSGRESALRALQAAGFTVT 108
>sp|B1LWQ1|RS11_METRJ 30S ribosomal protein S11 OS=Methylobacterium radiotolerans (strain
ATCC 27329 / DSM 1819 / JCM 2831) GN=rpsK PE=3 SV=1
Length = 129
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 105 SDDGGRKITSHGRRDMDRIAAQIRVSKKEAALQALAAQGITVV 147
++D GRK HG R ++ + S +E+AL+AL A G TV
Sbjct: 67 AEDAGRKAAEHGMRTLE-VEVSGPGSGRESALRALQAAGFTVT 108
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3
SV=1
Length = 1509
Score = 29.6 bits (65), Expect = 7.0, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 37 YDPDWFYTRCAA--LARHIYMRSPVGVKTVTKIFGGRKRNGVCPSHFCRSSGSVARKALQ 94
YD D F+T + + Y R PV + I+ GR+R+ V P H S + R L
Sbjct: 113 YDADLFHTYSGLFLVVVNPYKRLPVYTPEIIDIYRGRQRDKVAP-HIFAISDAAYRAMLN 171
Query: 95 ALEQVNIIEKSDDGGRK 111
+ +++ + G K
Sbjct: 172 TRQNQSMLITGESGAGK 188
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle OS=Drosophila melanogaster GN=Mhc PE=1
SV=4
Length = 1962
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 30/70 (42%)
Query: 41 WFYTRCAALARHIYMRSPVGVKTVTKIFGGRKRNGVCPSHFCRSSGSVARKALQALEQVN 100
+ Y+ +A + Y R PV K++ G++RN V P F S G+ + Q
Sbjct: 116 YTYSGLFCVAINPYKRYPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSM 175
Query: 101 IIEKSDDGGR 110
+I G+
Sbjct: 176 LITGESGAGK 185
>sp|P46367|ALDH4_YEAST Potassium-activated aldehyde dehydrogenase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=ALD4 PE=1 SV=2
Length = 519
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 43 YTRCAALARHIYMRSPVGVKTVTKIFGGRKRN 74
+T A RHIY + G+K VT GG+ N
Sbjct: 266 FTGSTATGRHIYQSAAAGLKKVTLELGGKSPN 297
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 29.6 bits (65), Expect = 7.9, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 37 YDPDWFYTRCAA--LARHIYMRSPVGVKTVTKIFGGRKRNGVCPSHFCRS 84
Y+ D YT +A + + R P+ + + IF GR+RN V P F S
Sbjct: 110 YNQDLIYTYSGLFLVAVNPFKRIPIYTQEMVDIFKGRRRNEVAPHIFAIS 159
>sp|B4R8P0|RS11_PHEZH 30S ribosomal protein S11 OS=Phenylobacterium zucineum (strain
HLK1) GN=rpsK PE=3 SV=1
Length = 129
Score = 29.3 bits (64), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 105 SDDGGRKITSHGRRDMDRIAAQIRVSKKEAALQALAAQGITVV 147
++D GRK HG R ++ + S +E+AL+AL A G+T+
Sbjct: 67 AEDAGRKAAEHGVRTLE-VNVSGPGSGRESALRALQAVGMTIT 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,297,316
Number of Sequences: 539616
Number of extensions: 1932295
Number of successful extensions: 4768
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 4713
Number of HSP's gapped (non-prelim): 93
length of query: 152
length of database: 191,569,459
effective HSP length: 107
effective length of query: 45
effective length of database: 133,830,547
effective search space: 6022374615
effective search space used: 6022374615
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)