Query psy5613
Match_columns 1010
No_of_seqs 553 out of 3653
Neff 8.4
Searched_HMMs 29240
Date Fri Aug 16 22:03:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5613.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5613hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbr_A Lectin, myxobacterial h 99.8 3.5E-25 1.2E-29 232.0 -17.3 252 532-926 5-265 (267)
2 4fbr_A Lectin, myxobacterial h 99.8 1.1E-24 3.8E-29 228.2 -15.7 257 101-504 5-265 (267)
3 2vj3_A Neurogenic locus notch 99.8 1.3E-19 4.4E-24 175.1 10.2 122 133-287 3-127 (135)
4 1z1y_A Ookinete surface protei 99.8 1.4E-20 4.7E-25 192.7 3.0 144 198-383 11-173 (186)
5 1z1y_A Ookinete surface protei 99.8 1.4E-20 4.7E-25 192.8 1.3 150 93-279 10-175 (186)
6 2vj3_A Neurogenic locus notch 99.8 3.3E-19 1.1E-23 172.2 9.0 116 198-356 13-128 (135)
7 2ygq_A WIF-1, WNT inhibitory f 99.7 4.4E-18 1.5E-22 188.3 8.3 155 40-280 154-309 (324)
8 2ygq_A WIF-1, WNT inhibitory f 99.7 5.3E-18 1.8E-22 187.7 7.8 158 90-336 150-307 (324)
9 4d90_A EGF-like repeat and dis 99.7 4.4E-17 1.5E-21 159.2 10.1 122 244-383 1-131 (143)
10 2vj2_A Jagged-1; signalling, p 99.7 5.6E-18 1.9E-22 170.0 3.4 151 106-336 14-168 (169)
11 4d90_A EGF-like repeat and dis 99.7 5.8E-17 2E-21 158.4 9.4 122 136-279 1-133 (143)
12 2vj2_A Jagged-1; signalling, p 99.6 2.1E-16 7.3E-21 158.5 5.3 150 595-828 15-168 (169)
13 3fcs_B Integrin beta-3; beta p 99.6 1.9E-15 6.6E-20 181.2 11.6 177 87-336 433-627 (690)
14 3fcs_B Integrin beta-3; beta p 99.6 4.5E-15 1.5E-19 178.1 12.9 178 245-505 436-625 (690)
15 1yo8_A Thrombospondin-2; EGF, 99.6 4.7E-15 1.6E-19 175.1 12.7 137 134-286 2-155 (634)
16 1yo8_A Thrombospondin-2; EGF, 99.6 3.9E-15 1.3E-19 175.8 12.0 149 88-272 3-177 (634)
17 1uzk_A Fibrillin-1; glycoprote 99.6 1.4E-16 4.7E-21 159.0 -0.5 137 88-276 3-156 (162)
18 2bou_A EGF-like module contain 99.6 9.1E-16 3.1E-20 149.7 5.0 126 196-336 5-133 (143)
19 1uzk_A Fibrillin-1; glycoprote 99.5 3.7E-16 1.3E-20 155.9 -1.4 142 134-334 2-156 (162)
20 2bou_A EGF-like module contain 99.5 6.8E-15 2.3E-19 143.5 5.7 111 94-226 7-132 (143)
21 1dx5_I Thrombomodulin; serine 99.5 1.8E-14 6.1E-19 135.2 3.3 105 241-381 2-111 (118)
22 1dx5_I Thrombomodulin; serine 99.4 1.8E-14 6.2E-19 135.1 0.5 109 133-276 2-112 (118)
23 2w86_A Fibrillin-1, fibrillin1 99.4 1.4E-14 4.6E-19 142.0 -2.4 132 88-276 4-141 (147)
24 2w86_A Fibrillin-1, fibrillin1 99.4 4.8E-14 1.7E-18 138.1 0.9 119 241-381 2-140 (147)
25 2gy5_A Angiopoietin-1 receptor 99.3 2.4E-12 8.1E-17 147.4 11.7 131 650-869 185-316 (423)
26 3k6s_B Integrin beta-2; cell r 99.3 1.1E-12 3.8E-17 156.8 9.1 186 24-276 421-617 (687)
27 2gy5_A Angiopoietin-1 receptor 99.3 3.1E-12 1.1E-16 146.4 9.8 161 596-869 184-346 (423)
28 1tpg_A T-plasminogen activator 99.3 1.4E-12 4.9E-17 115.8 4.1 87 155-283 1-90 (91)
29 3k6s_B Integrin beta-2; cell r 99.3 2.5E-12 8.4E-17 153.9 7.4 175 691-932 434-622 (687)
30 1tpg_A T-plasminogen activator 99.3 1.6E-12 5.5E-17 115.5 4.0 82 212-336 1-85 (91)
31 4aqs_A Laminin subunit beta-1; 99.2 3.4E-11 1.2E-15 143.1 8.5 100 493-666 418-524 (525)
32 1aut_L Activated protein C; se 99.1 3.9E-11 1.3E-15 111.6 4.8 95 241-366 4-109 (114)
33 1emn_A Fibrillin; extracellula 99.1 5.9E-11 2E-15 103.3 5.5 73 240-334 2-77 (82)
34 1emn_A Fibrillin; extracellula 99.1 5.3E-11 1.8E-15 103.6 4.9 69 88-168 5-77 (82)
35 1lmj_A Fibrillin 1; EGF, calci 99.0 9E-11 3.1E-15 103.2 4.0 71 88-167 3-79 (86)
36 4aqs_A Laminin subunit beta-1; 99.0 1.9E-10 6.4E-15 136.6 7.5 238 102-383 272-523 (525)
37 1lmj_A Fibrillin 1; EGF, calci 99.0 7.6E-11 2.6E-15 103.7 3.0 72 242-334 2-80 (86)
38 1x7a_L Coagulation factor IX, 99.0 2.5E-10 8.4E-15 111.0 6.1 76 240-336 45-125 (146)
39 1aut_L Activated protein C; se 99.0 2.1E-10 7.2E-15 106.7 5.1 63 96-167 22-86 (114)
40 1nfu_B Coagulation factor XA, 99.0 1E-10 3.5E-15 118.3 1.5 77 240-336 39-120 (195)
41 1z6c_A Vitamin K-dependent pro 99.0 2.7E-10 9.3E-15 100.3 4.0 70 242-336 2-77 (87)
42 2vh0_B Activated factor XA lig 98.9 1.7E-10 5.8E-15 110.6 1.8 77 240-336 39-120 (134)
43 1x7a_L Coagulation factor IX, 98.9 5.4E-10 1.8E-14 108.6 5.3 67 88-166 48-117 (146)
44 2c4f_L Coagulation factor VII 98.9 7.4E-10 2.5E-14 107.3 5.9 79 241-336 45-128 (142)
45 2c4f_L Coagulation factor VII 98.9 5.5E-10 1.9E-14 108.2 3.7 69 88-165 47-119 (142)
46 1n7d_A LDL receptor, low-densi 98.9 3.5E-08 1.2E-12 121.4 20.3 168 95-334 182-366 (699)
47 1z6c_A Vitamin K-dependent pro 98.9 6.8E-10 2.3E-14 97.8 2.8 69 88-167 3-74 (87)
48 1nfu_B Coagulation factor XA, 98.8 7.2E-10 2.5E-14 112.1 2.0 67 88-165 42-111 (195)
49 2vh0_B Activated factor XA lig 98.8 9.9E-10 3.4E-14 105.2 1.2 67 88-165 42-111 (134)
50 2w2n_E LDL receptor, low-densi 98.8 1.2E-09 4.3E-14 99.8 1.6 79 217-334 18-101 (107)
51 2w2n_E LDL receptor, low-densi 98.8 1.6E-09 5.5E-14 99.1 2.2 82 268-381 18-100 (107)
52 1klo_A Laminin; glycoprotein; 98.7 9.1E-09 3.1E-13 101.7 5.4 117 693-869 2-142 (162)
53 3h5c_B Vitamin K-dependent pro 98.7 1.4E-08 4.7E-13 112.8 7.5 75 241-334 3-77 (317)
54 3h5c_B Vitamin K-dependent pro 98.7 1.3E-08 4.4E-13 113.0 6.9 69 88-167 5-76 (317)
55 1n7d_A LDL receptor, low-densi 98.7 5.9E-08 2E-12 119.3 12.5 135 199-381 221-365 (699)
56 2p28_B Integrin beta-2; hybrid 98.6 1.4E-08 4.7E-13 104.8 3.8 103 40-167 97-210 (217)
57 3m0c_C LDL receptor, low-densi 98.6 4E-08 1.4E-12 121.6 6.8 127 216-390 257-394 (791)
58 1klo_A Laminin; glycoprotein; 98.5 4.9E-08 1.7E-12 96.5 5.3 119 636-823 2-143 (162)
59 3m0c_C LDL receptor, low-densi 98.5 1.9E-07 6.6E-12 115.4 8.8 100 199-334 280-384 (791)
60 2p28_B Integrin beta-2; hybrid 98.4 1.1E-07 3.7E-12 98.1 5.2 103 742-869 97-210 (217)
61 1edm_B Factor IX; epidermal gr 98.4 3.4E-07 1.2E-11 66.9 4.5 37 242-278 2-38 (39)
62 3u7u_G Neuregulin 1; signaling 98.3 1.9E-07 6.5E-12 73.3 2.9 42 240-281 5-51 (55)
63 3u7u_G Neuregulin 1; signaling 98.2 4.1E-07 1.4E-11 71.3 2.9 41 133-179 6-51 (55)
64 1edm_B Factor IX; epidermal gr 98.2 1E-06 3.5E-11 64.4 4.2 34 134-167 2-35 (39)
65 3p5b_L Low density lipoprotein 98.2 1.2E-06 4E-11 100.4 6.8 70 89-167 1-71 (400)
66 3p5b_L Low density lipoprotein 98.1 1.7E-06 5.7E-11 99.2 5.1 69 244-334 1-72 (400)
67 3v65_B Low-density lipoprotein 98.0 9.3E-07 3.2E-11 100.8 1.2 69 242-332 2-74 (386)
68 1egf_A Epidermal growth factor 98.0 4.5E-06 1.6E-10 65.4 4.0 40 242-281 2-46 (53)
69 3v65_B Low-density lipoprotein 97.9 1.9E-06 6.4E-11 98.3 1.1 83 836-935 2-85 (386)
70 1a3p_A Epidermal growth factor 97.9 6.3E-06 2.1E-10 62.2 3.6 38 245-282 2-44 (45)
71 2k2s_B Micronemal protein 6; m 97.8 3.6E-06 1.2E-10 67.5 0.7 40 240-279 8-50 (61)
72 1a3p_A Epidermal growth factor 97.8 1.3E-05 4.6E-10 60.3 3.5 34 90-126 2-40 (45)
73 2k2s_B Micronemal protein 6; m 97.8 2.7E-06 9.2E-11 68.3 -0.9 39 134-178 10-51 (61)
74 1hae_A Heregulin-alpha; growth 97.7 6.2E-06 2.1E-10 67.3 1.1 44 243-286 6-54 (63)
75 1egf_A Epidermal growth factor 97.7 1.9E-05 6.5E-10 61.8 3.8 39 134-178 2-45 (53)
76 1k36_A Epiregulin; EGF-like fo 97.7 2E-05 6.7E-10 59.5 3.0 37 242-279 2-43 (46)
77 1hae_A Heregulin-alpha; growth 97.7 1.1E-05 3.8E-10 65.7 1.8 43 89-140 7-54 (63)
78 2wg3_C Hedgehog-interacting pr 97.5 9.7E-06 3.3E-10 94.1 -0.6 59 95-178 398-456 (463)
79 1k36_A Epiregulin; EGF-like fo 97.5 3.4E-05 1.2E-09 58.2 2.6 38 134-178 2-44 (46)
80 3zyj_B Netrin-G1; cell adhesio 97.5 5E-05 1.7E-09 85.1 4.6 114 694-865 299-419 (426)
81 3zyj_B Netrin-G1; cell adhesio 97.5 5.3E-05 1.8E-09 84.9 3.8 111 96-262 299-412 (426)
82 2wg3_C Hedgehog-interacting pr 97.4 1.8E-05 6.1E-10 91.8 -0.3 78 597-721 377-454 (463)
83 3ca7_A Protein spitz; argos, E 97.2 4E-05 1.4E-09 59.6 -0.2 29 693-721 15-47 (52)
84 3ca7_A Protein spitz; argos, E 97.2 3.9E-05 1.3E-09 59.7 -1.0 30 901-933 15-48 (52)
85 1nql_B Epidermal growth factor 96.9 0.00039 1.3E-08 54.1 2.2 33 248-280 11-45 (53)
86 2kl7_A Fibulin-4; secreted, ca 96.8 0.00078 2.7E-08 56.0 3.7 33 348-380 2-37 (71)
87 1apq_A Complement protease C1R 96.8 0.001 3.5E-08 51.8 4.1 33 347-381 2-44 (53)
88 1nql_B Epidermal growth factor 96.8 0.00041 1.4E-08 54.0 1.7 31 93-126 11-43 (53)
89 1apq_A Complement protease C1R 96.6 0.0012 4.1E-08 51.4 3.5 34 241-276 2-45 (53)
90 1gl4_A Nidogen-1, entactin; im 96.6 0.00051 1.8E-08 72.5 1.2 44 347-390 3-48 (285)
91 2jkh_L Factor X light chain; p 96.4 0.0015 5.1E-08 51.4 2.8 40 350-391 2-45 (55)
92 2kl7_A Fibulin-4; secreted, ca 96.4 0.0015 5E-08 54.3 2.8 34 88-121 3-39 (71)
93 2fd6_A Urokinase-type plasmino 96.3 0.0028 9.7E-08 58.8 4.6 58 250-336 2-62 (122)
94 1ob1_C Major merozoite surface 96.2 0.0032 1.1E-07 54.7 3.7 67 93-165 9-83 (99)
95 1kli_L Factor VIIA; extrinsic 96.1 0.0031 1.1E-07 51.9 3.0 44 347-392 3-51 (69)
96 1g1s_A P-selectin; selectin, l 96.0 0.0018 6.2E-08 63.6 1.6 38 88-128 119-156 (162)
97 1ob1_C Major merozoite surface 95.9 0.0047 1.6E-07 53.7 3.6 72 245-331 6-83 (99)
98 2fd6_A Urokinase-type plasmino 95.9 0.0056 1.9E-07 56.8 4.2 55 95-167 2-59 (122)
99 1g1s_A P-selectin; selectin, l 95.7 0.0028 9.7E-08 62.1 1.6 41 136-182 120-160 (162)
100 3ltf_D Protein spitz; receptor 95.5 0.0052 1.8E-07 48.7 2.2 31 95-128 15-49 (58)
101 1gl4_A Nidogen-1, entactin; im 95.4 0.0023 8E-08 67.5 -0.5 40 627-666 3-44 (285)
102 1n1i_A Merozoite surface prote 95.3 0.025 8.6E-07 49.5 5.7 64 94-165 16-84 (105)
103 2jkh_L Factor X light chain; p 95.2 0.0061 2.1E-07 47.8 1.5 44 630-677 2-47 (55)
104 3ltf_D Protein spitz; receptor 95.2 0.0085 2.9E-07 47.5 2.3 32 797-831 15-50 (58)
105 1kli_L Factor VIIA; extrinsic 94.8 0.01 3.4E-07 48.9 1.7 46 627-676 3-51 (69)
106 1n1i_A Merozoite surface prote 94.6 0.051 1.7E-06 47.6 5.8 67 795-869 15-86 (105)
107 1kig_L Factor XA; glycoprotein 94.5 0.015 5.1E-07 44.7 2.1 31 361-391 10-42 (51)
108 1q4g_A Prostaglandin G/H synth 94.5 0.014 4.7E-07 68.6 2.7 37 243-279 2-40 (553)
109 1q4g_A Prostaglandin G/H synth 94.2 0.018 6.1E-07 67.7 2.7 36 88-126 2-39 (553)
110 3nt1_A Prostaglandin-endoperox 94.1 0.025 8.6E-07 66.5 3.8 37 88-127 1-39 (587)
111 3nt1_A Prostaglandin-endoperox 93.9 0.027 9.2E-07 66.2 3.5 37 243-279 1-39 (587)
112 2bz6_L Blood coagulation facto 93.0 0.047 1.6E-06 42.3 2.5 31 361-391 11-44 (53)
113 1kig_L Factor XA; glycoprotein 92.4 0.051 1.7E-06 41.7 1.9 34 641-676 10-43 (51)
114 3cfw_A L-selectin; EGF, cell a 92.3 0.075 2.6E-06 51.9 3.6 38 88-128 119-156 (164)
115 1g1t_A E-selectin; EGF, adhesi 92.1 0.043 1.5E-06 53.1 1.5 38 243-280 119-156 (157)
116 3cfw_A L-selectin; EGF, cell a 91.8 0.084 2.9E-06 51.5 3.1 41 136-182 120-160 (164)
117 1szb_A Mannose binding lectin- 91.6 0.065 2.2E-06 52.8 2.1 41 328-380 113-158 (170)
118 1xdt_R Hbegf, heparin-binding 91.1 0.08 2.7E-06 44.2 1.8 34 89-126 38-76 (79)
119 3e50_C Protransforming growth 91.0 0.15 5E-06 38.8 3.0 29 692-721 14-44 (50)
120 1xdt_R Hbegf, heparin-binding 90.8 0.12 4.1E-06 43.2 2.6 37 242-279 36-77 (79)
121 2i9a_A Urokinase-type plasmino 90.8 0.19 6.3E-06 47.9 4.3 29 95-126 14-45 (145)
122 2i9a_A Urokinase-type plasmino 90.5 0.19 6.4E-06 47.9 4.1 32 250-281 14-48 (145)
123 1iox_A Betacellulin; EGF-like 90.5 0.12 4E-06 39.4 2.1 29 692-721 14-44 (50)
124 2rnl_A Amphiregulin; AR, color 90.4 0.2 6.8E-06 38.1 3.3 30 93-126 17-48 (50)
125 1oig_A Dumpy, CG33196-PB; stru 90.4 0.15 5.2E-06 32.5 2.1 24 68-91 2-25 (26)
126 3e50_C Protransforming growth 89.8 0.22 7.6E-06 37.8 3.1 30 93-126 13-44 (50)
127 2bz6_L Blood coagulation facto 89.2 0.11 3.9E-06 40.1 1.2 34 641-676 11-45 (53)
128 1iox_A Betacellulin; EGF-like 89.2 0.19 6.4E-06 38.3 2.3 30 900-933 14-45 (50)
129 1g1t_A E-selectin; EGF, adhesi 89.0 0.12 4.1E-06 49.9 1.5 36 88-126 119-154 (157)
130 2rnl_A Amphiregulin; AR, color 88.9 0.24 8.2E-06 37.6 2.7 29 900-932 18-48 (50)
131 1szb_A Mannose binding lectin- 88.8 0.089 3E-06 51.8 0.4 42 115-167 113-159 (170)
132 2y38_A Laminin subunit alpha-5 88.0 0.62 2.1E-05 51.9 6.5 61 707-769 286-375 (403)
133 2ygo_A WIF-1, WNT inhibitory f 87.7 0.28 9.7E-06 48.1 3.1 25 40-64 154-179 (188)
134 2ygo_A WIF-1, WNT inhibitory f 87.7 0.27 9.2E-06 48.3 2.9 30 690-722 151-180 (188)
135 4aqt_A Laminin subunit gamma-1 87.3 0.59 2E-05 51.8 5.7 64 704-769 269-352 (375)
136 2wph_E Coagulation factor IXA 86.0 0.39 1.3E-05 37.9 2.5 29 361-389 11-42 (59)
137 4aqt_A Laminin subunit gamma-1 86.0 0.65 2.2E-05 51.5 5.2 71 209-279 268-350 (375)
138 3asi_A Neurexin-1-alpha; beta- 85.2 0.55 1.9E-05 53.2 4.3 38 242-279 184-222 (410)
139 2y38_A Laminin subunit alpha-5 84.2 1.4 4.9E-05 49.0 6.9 67 213-279 286-373 (403)
140 3asi_A Neurexin-1-alpha; beta- 83.5 0.63 2.1E-05 52.7 3.8 36 88-126 185-221 (410)
141 2wph_E Coagulation factor IXA 81.8 0.83 2.9E-05 36.0 2.8 21 641-661 11-32 (59)
142 2p26_A Integrin beta-2; hybrid 81.3 0.86 2.9E-05 48.3 3.5 85 21-120 179-265 (280)
143 2p26_A Integrin beta-2; hybrid 81.1 0.75 2.6E-05 48.8 3.0 65 743-822 198-265 (280)
144 2e26_A Reelin, reeler protein; 78.4 0.58 2E-05 55.5 1.1 46 709-767 520-565 (725)
145 3qcw_A Neurexin-1-alpha; synap 76.6 1.6 5.3E-05 57.0 4.6 39 242-280 1016-1055(1245)
146 1oig_A Dumpy, CG33196-PB; stru 76.5 1.3 4.5E-05 28.3 1.8 24 452-475 2-25 (26)
147 3qcw_A Neurexin-1-alpha; synap 69.7 2.7 9.4E-05 54.6 4.4 35 89-126 1018-1053(1245)
148 1nzi_A Complement C1S componen 69.4 2.1 7.1E-05 41.1 2.4 33 347-381 115-150 (159)
149 2e26_A Reelin, reeler protein; 68.9 1 3.5E-05 53.4 0.1 40 18-64 523-564 (725)
150 1b9w_A Protein (merozoite surf 68.2 4 0.00014 34.8 3.5 72 245-331 6-79 (95)
151 1b9w_A Protein (merozoite surf 66.8 6.6 0.00022 33.5 4.5 71 839-923 6-78 (95)
152 1nzi_A Complement C1S componen 62.1 3.8 0.00013 39.2 2.7 33 241-275 115-150 (159)
153 3f1s_B Vitamin K-dependent pro 57.6 4.1 0.00014 43.3 2.2 30 349-380 2-34 (283)
154 3v64_C Agrin; beta propeller, 55.5 4.2 0.00014 44.7 1.9 37 349-387 1-40 (349)
155 3f1s_B Vitamin K-dependent pro 55.2 6.5 0.00022 41.7 3.3 44 629-676 2-48 (283)
156 3v64_C Agrin; beta propeller, 46.9 6.1 0.00021 43.3 1.4 31 243-275 1-32 (349)
157 2ddu_A Reelin; beta-jelly-roll 39.9 6.1 0.00021 43.3 0.0 25 37-61 192-218 (387)
158 3fby_A COMP, cartilage oligome 36.0 29 0.001 39.7 4.7 33 93-126 26-59 (551)
159 3fl7_A Ephrin receptor; ATP-bi 34.1 13 0.00045 43.3 1.6 68 797-869 251-321 (536)
160 3fby_A COMP, cartilage oligome 31.3 19 0.00065 41.2 2.2 32 900-932 27-59 (551)
161 3fl7_A Ephrin receptor; ATP-bi 30.9 15 0.00052 42.7 1.5 67 41-121 252-322 (536)
162 3g5c_A ADAM 22; alpha/beta fol 23.0 25 0.00084 40.5 1.2 48 74-127 423-481 (510)
163 3t5o_A Complement component C6 21.0 64 0.0022 40.2 4.5 35 89-126 498-532 (913)
No 1
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.85 E-value=3.5e-25 Score=232.03 Aligned_cols=252 Identities=11% Similarity=-0.023 Sum_probs=177.8
Q ss_pred cccccCCCeeeecCCC---ccCCCCCCcCCCccCCCCCCCccccCCcccCCCCCCCCCCceeeccCCCceeecCCCCccC
Q psy5613 532 QCREVHKQAVCSCLPN---YFGSPPNCRPECTVNSDCPLDKACFNQKCVDPCPGTCGQNANCRVINHNPSCTCKAGFTGD 608 (1010)
Q Consensus 532 ~C~~~~g~~~C~C~~G---~~G~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~~~~~C~C~~Gy~G~ 608 (1010)
++.+..|+|++.+.+| |+|. +++. +. ..+...|.++++|++..++|+|.|++||+|.
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~--~~~~----n~--------------~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~ 64 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGA--RDKQ----NV--------------VALDIKSDDGGKTLKGTMTYNGEGPIGFRGT 64 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCC--CSSC----CE--------------EEEEEECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred eEeecCCcccCCcCCCCceeecc--cccc----cc--------------ccCCCCcCCCCeecCCCCCeEEeCCCCcccc
Confidence 3557788999999988 4454 3321 11 1112367889999999999999999999999
Q ss_pred CccccccCCCCCCCCCCCCCCCC------CCCCCCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCCCCCCCcccc
Q psy5613 609 PRVFCSRIPPPPPQESPPEYVNP------CIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECPYDKACI 682 (1010)
Q Consensus 609 ~~~~C~~~~~~~~~~~~~~~id~------C~~~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~ 682 (1010)
. |+ ++|++ |.+.||+++++| |.|. +|+ ..++|.
T Consensus 65 ~---Ce------------~ni~ec~~~~~c~s~pC~nggtc--------------~~G~--~c~----~~~eC~------ 103 (267)
T 4fbr_A 65 L---SS------------ANNYTVENQWGGTSAPWQPGGVW--------------VLGA--RDK----QNIVAV------ 103 (267)
T ss_dssp E---CS------------TTEEEEEEESSSTTSCEEEEEEE--------------ECCC--CSS----CCEEEE------
T ss_pred c---cc------------ccccccccccCcCCCcccCCCee--------------eccC--ccc----cccccC------
Confidence 6 87 68888 666677776654 3455 443 333443
Q ss_pred CCccCCCCCCCCCCCCeeeeeCCcceeeCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccCceeecCCCccC
Q psy5613 683 NEKCRDPCPGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRDNVCVCLPDYYG 762 (1010)
Q Consensus 683 ~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~~~C~C~~G~~G 762 (1010)
+.+|.++++|++...+|+|+|++||+|..|+ +++++|...+ +.+.+.|.+ +..+|.|
T Consensus 104 --------s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce---------~~~d~C~n~~--~c~s~pC~n----gg~c~~G 160 (267)
T 4fbr_A 104 --------SIKSNDGGKTLTGTTTYNGEGPIGFKSEVTD---------GDTYSVENQW--GGSAAPWHS----GGVWVLG 160 (267)
T ss_dssp --------EEECSSTTSEEEEEEEETTSCCEEEEEEECC---------CCEEEEEEEC--SSTTSCCEE----EEEEECC
T ss_pred --------CCCCCCCCEEecCCccEEeeCCCCccccCCC---------CCcccccccC--CcCCccccC----Ccceecc
Confidence 3478999999999999999999999999998 4666644333 222222322 1112456
Q ss_pred CCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCeeeeeCCCCCccCCCccccCCccCCCCCCCCCC
Q psy5613 763 DGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPGTTGSPFIQCKPVIQEPVYTNPCQP 842 (1010)
Q Consensus 763 ~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~C~~ 842 (1010)
..++..++ |.+.+|.++++|++..++|+|.|++||+|. +|+..+ ++|..
T Consensus 161 ~~c~~~i~----------------------c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~---~c~~~i------~ec~~ 209 (267)
T 4fbr_A 161 TRGKQNVI----------------------NVDAKSNDGGKTLSGTMTYNGEGPIGFRGT---LTSPDT------YTVEN 209 (267)
T ss_dssp SSTTSCEE----------------------EEEEECSSTTSEEEEEEEETTSCCEEEEEE---EEETTE------EEEEE
T ss_pred cccccccc----------------------cCCCCCCCCCEeeCCCCCeEEeCCCCcccc---cccccc------ceecc
Confidence 66654321 115678999999999999999999999999 598754 66544
Q ss_pred CCCCCCCceeecCCceeeecCCCCcCCCCCCCCCCccCCCCCCcccccCCcccCCCCCCCCCCCeeeecCCCceeeCCCC
Q psy5613 843 SPCGPNSQCREVNKQAVCSCLPNYFGSPPNCRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHSPICTCRPG 922 (1010)
Q Consensus 843 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G 922 (1010)
.++...+.|.+. |.|.+.|..|+... .|+ .+|.++|+|++.+.+|+|.||+|
T Consensus 210 ~~~c~~~~c~~g-G~~~~~C~~g~n~~------~c~---------------------~~c~ngGtC~dg~~sy~CeCp~G 261 (267)
T 4fbr_A 210 QWGGSTAPWNPG-GFWMIGARNGQNVV------ALN---------------------VASSDGGKTLAGTMIYNGEGPIG 261 (267)
T ss_dssp ECSCTTSCCEEE-EEEECCCCTTCCEE------EEE---------------------EECSSTTSEEEEEEEETTSCCEE
T ss_pred CCCccCCcccCC-CeEEEecCCCCccc------cCC---------------------cCCCCCCEeeCCCcceeecCCCC
Confidence 433344555554 45667788888766 222 25778999999999999999999
Q ss_pred CcCC
Q psy5613 923 FTGE 926 (1010)
Q Consensus 923 ~~G~ 926 (1010)
|+|.
T Consensus 262 F~G~ 265 (267)
T 4fbr_A 262 FRAR 265 (267)
T ss_dssp EEEE
T ss_pred cccc
Confidence 9985
No 2
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.84 E-value=1.1e-24 Score=228.25 Aligned_cols=257 Identities=7% Similarity=-0.112 Sum_probs=176.2
Q ss_pred eeeecCCceeeeCCCC---CccCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCcc
Q psy5613 101 ICDVVNHAVMCTCPPG---TTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTV 177 (1010)
Q Consensus 101 ~C~~~~g~~~C~C~~G---~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~ 177 (1010)
++.|..|+|++.+.|| |+|.. ++ .++.++. .+|.++|+|++..++|+|.|++||+|. +|+.
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~---~~------~n~~~~~-~~c~ngG~C~~g~~~y~C~Cp~Gf~G~------~Ce~ 68 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGAR---DK------QNVVALD-IKSDDGGKTLKGTMTYNGEGPIGFRGT------LSSA 68 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCC---SS------CCEEEEE-EECSSTTSEEEEEEEETTSCCEEEEEE------ECST
T ss_pred eEeecCCcccCCcCCCCceeeccc---cc------cccccCC-CCcCCCCeecCCCCCeEEeCCCCcccc------cccc
Confidence 5778899999999999 55554 54 2233333 488999999999999999999999999 7877
Q ss_pred CCC-CCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCe
Q psy5613 178 NSD-CPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNAR 256 (1010)
Q Consensus 178 ~~~-C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~ 256 (1010)
+++ |.....|.. .+|+++++| |.|..+ .++++|++.||.++++
T Consensus 69 ni~ec~~~~~c~s--------~pC~nggtc--------------~~G~~c--------------~~~~eC~s~pC~ngG~ 112 (267)
T 4fbr_A 69 NNYTVENQWGGTS--------APWQPGGVW--------------VLGARD--------------KQNIVAVSIKSNDGGK 112 (267)
T ss_dssp TEEEEEEESSSTT--------SCEEEEEEE--------------ECCCCS--------------SCCEEEEEEECSSTTS
T ss_pred cccccccccCcCC--------CcccCCCee--------------eccCcc--------------ccccccCCCCCCCCCE
Confidence 643 222112222 244444444 456664 4567999999999999
Q ss_pred ecccCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCCcc
Q psy5613 257 CRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDAFR 336 (1010)
Q Consensus 257 C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~c~ 336 (1010)
|++...+|+|+|++||+|..|+.++++|+... .|. ..+|.+.++| |.|..++
T Consensus 113 C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~------~c~--------s~pC~ngg~c--------------~~G~~c~ 164 (267)
T 4fbr_A 113 TLTGTTTYNGEGPIGFKSEVTDGDTYSVENQW------GGS--------AAPWHSGGVW--------------VLGTRGK 164 (267)
T ss_dssp EEEEEEEETTSCCEEEEEEECCCCEEEEEEEC------SST--------TSCCEEEEEE--------------ECCSSTT
T ss_pred EecCCccEEeeCCCCccccCCCCCcccccccC------CcC--------CccccCCcce--------------ecccccc
Confidence 99999999999999999999998888766431 111 2345544444 3466665
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCCCCeEeecCCceeeeecCccccccccccCCcccccCCccccccccccccccccccccc
Q psy5613 337 QCSPIPQREPEYRDPCSTTQCGLNAICTVINGAAQCACLLLLQHHIHKNQDMDQYISLGYMLCHMDILSSEYIQVYTVQP 416 (1010)
Q Consensus 337 ~C~~i~~~~~~~~deC~~~~C~~~~~C~n~~g~~~C~C~~G~~g~~~~~~~~~~~~~~g~~~C~~~~~~~~~~~~~~~~p 416 (1010)
+ + .+|.+.||.++++|++..++|+|.|++||+|.... .+++++ ..++
T Consensus 165 ~----------~-i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~c~-~~i~ec---------------------~~~~ 211 (267)
T 4fbr_A 165 Q----------N-VINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTLTS-PDTYTV---------------------ENQW 211 (267)
T ss_dssp S----------C-EEEEEEECSSTTSEEEEEEEETTSCCEEEEEEEEE-TTEEEE---------------------EEEC
T ss_pred c----------c-cccCCCCCCCCCEeeCCCCCeEEeCCCCccccccc-ccccee---------------------ccCC
Confidence 2 2 34667899999999999999999999999985321 122221 1111
Q ss_pred cCCCCccCCCCCCcccCceeecCCCceeCCcccCCCCCCCCCCCCCcchhccCCccCCCCCCCCCCCCeeeccCCceeee
Q psy5613 417 VIQEDTCNCVPNAECRDGVCVCLPDYYGDGYVSCRPECVQNSDCPRNKACIRNKCKNPCVPGTCGEGAICDVINHAVMCT 496 (1010)
Q Consensus 417 ~~~~~~c~C~~~~~C~~~~C~C~~G~~G~~~~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~~~C~ 496 (1010)
. ....+|.+++. +.+.|..|+.+..+ ..+|.++++|++...+|.|.
T Consensus 212 ~--c~~~~c~~gG~---~~~~C~~g~n~~~c-----------------------------~~~c~ngGtC~dg~~sy~Ce 257 (267)
T 4fbr_A 212 G--GSTAPWNPGGF---WMIGARNGQNVVAL-----------------------------NVASSDGGKTLAGTMIYNGE 257 (267)
T ss_dssp S--CTTSCCEEEEE---EECCCCTTCCEEEE-----------------------------EEECSSTTSEEEEEEEETTS
T ss_pred C--ccCCcccCCCe---EEEecCCCCccccC-----------------------------CcCCCCCCEeeCCCcceeec
Confidence 0 00112223322 23456777665532 22678999999999999999
Q ss_pred CCCCCccC
Q psy5613 497 CPPGTTGS 504 (1010)
Q Consensus 497 C~~G~~G~ 504 (1010)
|++||+|.
T Consensus 258 Cp~GF~G~ 265 (267)
T 4fbr_A 258 GPIGFRAR 265 (267)
T ss_dssp CCEEEEEE
T ss_pred CCCCcccc
Confidence 99999985
No 3
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.79 E-value=1.3e-19 Score=175.07 Aligned_cols=122 Identities=28% Similarity=0.602 Sum_probs=103.0
Q ss_pred CCCCCCC--CCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccC-CCCCCCCcccCCcccCCCCCCCCCCceEeec
Q psy5613 133 VYTNPCQ--PSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVN-SDCPLDRACQNQKCVDPCPGSCGYRARCQVY 209 (1010)
Q Consensus 133 ~~~d~C~--~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~-~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~ 209 (1010)
.|+|+|+ .+||.++|+|+++.++|+|.|++||+|. .|+.. ++| . +++|.++++|+++
T Consensus 3 ~dideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~------~C~~~~~~C------~--------~~~C~~~~~C~~~ 62 (135)
T 2vj3_A 3 QDVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGP------RCEIDVNEC------V--------SNPCQNDATCLDQ 62 (135)
T ss_dssp CCCCTTTSSSCSSSTTCEEEECSSSEEEECCTTEEST------TSCEECCTT------T--------TCCCCSSCEEEEC
T ss_pred cccccccCCCCCCCCCCEeECCCCCEEEECCCCCcCC------cccccCccC------C--------CCCCCCCCEEeCC
Confidence 4679998 6899999999999999999999999998 67632 333 2 2367778999999
Q ss_pred CCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCCCCCccC
Q psy5613 210 NHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLIN 287 (1010)
Q Consensus 210 ~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~ 287 (1010)
.++|+|+|++||+|..| +.++++|...+|.++++|+++.++|+|+|++||+|..|+.++++|..+
T Consensus 63 ~g~~~C~C~~G~~G~~C-------------~~~~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i~~C~~~ 127 (135)
T 2vj3_A 63 IGEFQCICMPGYEGVHC-------------EVNTDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDLHHILDA 127 (135)
T ss_dssp SSCEEEECCTTEESSSS-------------CEECCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEECC-----
T ss_pred CCCceeeCCCCCcCCcc-------------eecCCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccCccccCC
Confidence 99999999999999986 357899999999999999999999999999999999999888888754
No 4
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.79 E-value=1.4e-20 Score=192.73 Aligned_cols=144 Identities=18% Similarity=0.432 Sum_probs=117.5
Q ss_pred CCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCC----CCCCCCCCeecccC-----Cceeeee
Q psy5613 198 GSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCF----PSPCGSNARCRVQN-----EHALCEC 268 (1010)
Q Consensus 198 ~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~----~~~C~~~~~C~~~~-----g~~~C~C 268 (1010)
++|. +++|+++.++|+|.|++||+|..-..| +++|+|+ ..||.++++|+++. ++|+|+|
T Consensus 11 ~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C-----------~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C 78 (186)
T 1z1y_A 11 TICX-NGQLVQMSNHFXCMCNEGLVHLSENTC-----------EEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGC 78 (186)
T ss_dssp CCCB-TEEEEECSSCEEEEECTTEEEEETTEE-----------EECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEE
T ss_pred CCCC-CCEeECCCCCeEeECCCCCccCCCCcc-----------CCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCC
Confidence 4676 459999999999999999998732224 6899999 78999999999999 8999999
Q ss_pred CCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeecc----CCCCCceecCCCCccc-----CCcccCC
Q psy5613 269 LPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICS----VSNHIPICYCPAGFTG-----DAFRQCS 339 (1010)
Q Consensus 269 ~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~----~~~g~~~C~C~~Gy~G-----~~c~~C~ 339 (1010)
++||+|..++-.+++|.. .+|.++++|+ ++.++|+|.|++||+| ..|+
T Consensus 79 ~~G~~g~~~~C~~d~C~~--------------------~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~--- 135 (186)
T 1z1y_A 79 IEGYTLXEDTCVLDVCQY--------------------XNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCT--- 135 (186)
T ss_dssp CTTEEEETTEEEEGGGTT--------------------CCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEE---
T ss_pred CCCCccCCCCCCCCcCcC--------------------CCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcce---
Confidence 999999865422444432 2577789998 8889999999999999 4443
Q ss_pred CCCCCCCCCCCCCCCCCC-CCCCeEeecCCceeeeecCccccccc
Q psy5613 340 PIPQREPEYRDPCSTTQC-GLNAICTVINGAAQCACLLLLQHHIH 383 (1010)
Q Consensus 340 ~i~~~~~~~~deC~~~~C-~~~~~C~n~~g~~~C~C~~G~~g~~~ 383 (1010)
++ ++++|+ .+| .++++|+++.|+|+|.|++||+|+..
T Consensus 136 ~~------~~~~C~-~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~ 173 (186)
T 1z1y_A 136 XT------GETACQ-LXCNTDNEVCXNVEGVYXCQCMEGFTFDXE 173 (186)
T ss_dssp EE------ECCCCC-CCCCTTTEEEEEETTEEEEEECTTCEEETT
T ss_pred Ec------CCCccc-ccccccCcceecCCCCeeeECCCCCccCcc
Confidence 21 348997 499 89999999999999999999998643
No 5
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.78 E-value=1.4e-20 Score=192.76 Aligned_cols=150 Identities=24% Similarity=0.522 Sum_probs=118.9
Q ss_pred CCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCC----CCCCCCCCcceecC-----CCeeeecCCC
Q psy5613 93 PGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQ----PSPCGPNSQCREIN-----HQAVCSCLPN 163 (1010)
Q Consensus 93 ~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~----~~~C~~~g~C~~~~-----g~~~C~C~~G 163 (1010)
++||.++ +|+++.++|+|.|++||+|.....|++ +|+|+ .+||.++++|+++. ++|+|.|++|
T Consensus 10 ~~pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~~-------id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G 81 (186)
T 1z1y_A 10 DTICXNG-QLVQMSNHFXCMCNEGLVHLSENTCEE-------XNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEG 81 (186)
T ss_dssp TCCCBTE-EEEECSSCEEEEECTTEEEEETTEEEE-------CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTT
T ss_pred CCCCCCC-EeECCCCCeEeECCCCCccCCCCccCC-------CCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCC
Confidence 5788864 999999999999999999873233874 58998 78999999999999 8999999999
Q ss_pred CcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCceEe----ecCCCccccCCCCCccCCC--ccccCCCCCCC
Q psy5613 164 YFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQ----VYNHNPVCSCPPGYTGNPF--SQCLLPPTPTP 237 (1010)
Q Consensus 164 ~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~----~~~g~~~C~C~~Gy~g~~c--~~C~~~~~~~~ 237 (1010)
|+|... .|+ .++|.. ++|.++++|+ ++.++|+|.|++||+|... ..|+
T Consensus 82 ~~g~~~----~C~-------~d~C~~--------~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~------- 135 (186)
T 1z1y_A 82 YTLXED----TCV-------LDVCQY--------XNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCT------- 135 (186)
T ss_dssp EEEETT----EEE-------EGGGTT--------CCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEE-------
T ss_pred CccCCC----CCC-------CCcCcC--------CCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcce-------
Confidence 999731 222 123332 3577789999 7888999999999999321 1231
Q ss_pred CCCCCCCCCCCCCC-CCCCeecccCCceeeeeCCCCccCCCCc
Q psy5613 238 TQATPTDPCFPSPC-GSNARCRVQNEHALCECLPDYYGNPYEG 279 (1010)
Q Consensus 238 ~~~~~~d~C~~~~C-~~~~~C~~~~g~~~C~C~~Gf~G~~c~~ 279 (1010)
.+++++|.. +| .++++|+++.++|+|.|++||+|+.++.
T Consensus 136 --~~~~~~C~~-~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~ 175 (186)
T 1z1y_A 136 --XTGETACQL-XCNTDNEVCXNVEGVYXCQCMEGFTFDXEXN 175 (186)
T ss_dssp --EEECCCCCC-CCCTTTEEEEEETTEEEEEECTTCEEETTTT
T ss_pred --EcCCCcccc-cccccCcceecCCCCeeeECCCCCccCcccc
Confidence 012589984 99 9999999999999999999999998664
No 6
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.77 E-value=3.3e-19 Score=172.17 Aligned_cols=116 Identities=28% Similarity=0.522 Sum_probs=98.7
Q ss_pred CCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCC
Q psy5613 198 GSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPY 277 (1010)
Q Consensus 198 ~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c 277 (1010)
++|.++|+|+++.++|+|+|++||+|..| ++++++|...||.++++|+++.++|+|.|++||+|..|
T Consensus 13 ~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C-------------~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C 79 (135)
T 2vj3_A 13 NPCEHAGKCINTLGSFECQCLQGYTGPRC-------------EIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHC 79 (135)
T ss_dssp CSSSTTCEEEECSSSEEEECCTTEESTTS-------------CEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSS
T ss_pred CCCCCCCEeECCCCCEEEECCCCCcCCcc-------------cccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcc
Confidence 57788999999999999999999999986 35899999999999999999999999999999999999
Q ss_pred CcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCCcccCCCCCCCCCCCCCCCCCCC
Q psy5613 278 EGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDAFRQCSPIPQREPEYRDPCSTTQ 356 (1010)
Q Consensus 278 ~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~c~~C~~i~~~~~~~~deC~~~~ 356 (1010)
+.++++|.. .+|.++++|+++.++|+|.|++||+|..|+ .++++|+..+
T Consensus 80 ~~~~~~C~~--------------------~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~----------~~i~~C~~~~ 128 (135)
T 2vj3_A 80 EVNTDECAS--------------------SPCLHNGRCLDKINEFQCECPTGFTGHLCQ----------VDLHHILDAQ 128 (135)
T ss_dssp CEECCTTTT--------------------CCSTTTCEEEECSSCEEEECCTTEESSSSC----------EECC------
T ss_pred eecCCcccC--------------------CCcCCCCEeECCCCCeEEECCCCCcCCccC----------ccCccccCCC
Confidence 877777753 267778999999999999999999999986 4779997543
No 7
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.72 E-value=4.4e-18 Score=188.31 Aligned_cols=155 Identities=27% Similarity=0.758 Sum_probs=72.1
Q ss_pred CCCCCCeecC-cceecCCCCccCCCCcCCCCCccCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCceeeeCCCCCc
Q psy5613 40 NCVPNAVCKD-EVCVCLPDFYGDGYVSCRPECVLNSDCPSNKACIRNKCKNPCVPGTCGEGAICDVVNHAVMCTCPPGTT 118 (1010)
Q Consensus 40 ~C~~~~~C~~-~~C~C~~G~~g~~~~~~~~eC~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~ 118 (1010)
+|+++|+|++ ++|+|++||+|+.|+. +.|. .+|.++|+|++ .++|.|++||+
T Consensus 154 ~C~~~G~C~~~~~C~C~~G~~G~~C~~-----------------------~~C~-~~C~~~G~C~~---~~~C~C~~G~~ 206 (324)
T 2ygq_A 154 GCRNGGFCNERRICECPDGFHGPHCEK-----------------------ALCT-PRCMNGGLCVT---PGFCICPPGFY 206 (324)
T ss_dssp CCCSSCEECTTSCEECCTTEESSSSCE-----------------------ESSS-SCCCTTCEECS---SCCEECCTTCB
T ss_pred CCCCCCEECCCCeEECCCCCcCCCCCC-----------------------CCCC-CCCCCCCEEcC---CCEEeCCCCcc
Confidence 5999999998 8999999999985431 1121 36888999986 36999999999
Q ss_pred cCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCC
Q psy5613 119 GSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPG 198 (1010)
Q Consensus 119 g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~ 198 (1010)
|.. |+. +.|. .+|.++|+|++ .++|.|++||+|. .|+.. . |+.
T Consensus 207 G~~---C~~--------~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~------~C~~~-~---------------C~~ 249 (324)
T 2ygq_A 207 GVN---CDK--------ANCS-TTCFNGGTCFY---PGKCICPPGLEGE------QCEIS-K---------------CPQ 249 (324)
T ss_dssp TTT---TCB--------CCCS-SCCCSSCCBSC---SSCBCCCTTCCTT------TTC----------------------
T ss_pred CCC---ccc--------CcCC-CCCCCCCeeCC---CCeeeCCCCccCC------CCCcC-c---------------CCC
Confidence 998 862 4564 68999999987 4799999999998 66532 1 233
Q ss_pred CCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCC
Q psy5613 199 SCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYE 278 (1010)
Q Consensus 199 ~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~ 278 (1010)
+|.++|+|+. .++|.|++||+|..|+ +++|. .+|.++|+|++ .++|.|++||+|..|+
T Consensus 250 ~C~~~g~C~~---~~~C~C~~G~~G~~C~---------------~~~C~-~~C~~~g~C~~---~~~C~C~~G~~G~~C~ 307 (324)
T 2ygq_A 250 PCRNGGKCIG---KSKCKCSKGYQGDLCS---------------KPVCE-PGCGAHGTCHE---PNKCQCQEGWHGRHCN 307 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCEECC---CCEEECCCCCcCCCCc---------------CCCCC-CCCCCCCEECC---CCEeECCCCCcCCCCC
Confidence 5677889974 5899999999999862 45675 58999999997 4799999999999887
Q ss_pred cC
Q psy5613 279 GC 280 (1010)
Q Consensus 279 ~~ 280 (1010)
..
T Consensus 308 ~~ 309 (324)
T 2ygq_A 308 KR 309 (324)
T ss_dssp --
T ss_pred CC
Confidence 53
No 8
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.71 E-value=5.3e-18 Score=187.66 Aligned_cols=158 Identities=29% Similarity=0.833 Sum_probs=74.3
Q ss_pred CCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCCCC
Q psy5613 90 PCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPP 169 (1010)
Q Consensus 90 ~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~ 169 (1010)
+| +++|.++|+|++ .|+|.|++||+|+. |+. +.|. .+|.++|+|++ .++|.|++||+|.
T Consensus 150 ~C-~~~C~~~G~C~~---~~~C~C~~G~~G~~---C~~--------~~C~-~~C~~~G~C~~---~~~C~C~~G~~G~-- 208 (324)
T 2ygq_A 150 EC-PGGCRNGGFCNE---RRICECPDGFHGPH---CEK--------ALCT-PRCMNGGLCVT---PGFCICPPGFYGV-- 208 (324)
T ss_dssp CC-SSCCCSSCEECT---TSCEECCTTEESSS---SCE--------ESSS-SCCCTTCEECS---SCCEECCTTCBTT--
T ss_pred CC-CCCCCCCCEECC---CCeEECCCCCcCCC---CCC--------CCCC-CCCCCCCEEcC---CCEEeCCCCccCC--
Confidence 44 368999999986 47999999999998 873 3565 47999999987 5899999999998
Q ss_pred CCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCC
Q psy5613 170 GCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPS 249 (1010)
Q Consensus 170 ~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~ 249 (1010)
.|+.. .| ..+|.++|+|++ .++|.|++||+|..| ++++|. .
T Consensus 209 ----~C~~~-~C---------------~~~C~~~G~C~~---~~~C~C~~G~~G~~C---------------~~~~C~-~ 249 (324)
T 2ygq_A 209 ----NCDKA-NC---------------STTCFNGGTCFY---PGKCICPPGLEGEQC---------------EISKCP-Q 249 (324)
T ss_dssp ----TTCBC-CC---------------SSCCCSSCCBSC---SSCBCCCTTCCTTTT---------------C-------
T ss_pred ----CcccC-cC---------------CCCCCCCCeeCC---CCeeeCCCCccCCCC---------------CcCcCC-C
Confidence 66642 12 235777889976 378999999999986 245675 7
Q ss_pred CCCCCCeecccCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCC
Q psy5613 250 PCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAG 329 (1010)
Q Consensus 250 ~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~G 329 (1010)
+|.++|+|+. .++|.|++||+|+.|+. ++|. ..|.++|+|++ .++|.|++|
T Consensus 250 ~C~~~g~C~~---~~~C~C~~G~~G~~C~~--~~C~---------------------~~C~~~g~C~~---~~~C~C~~G 300 (324)
T 2ygq_A 250 PCRNGGKCIG---KSKCKCSKGYQGDLCSK--PVCE---------------------PGCGAHGTCHE---PNKCQCQEG 300 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCEECC---CCEEECCCCCcCCCCcC--CCCC---------------------CCCCCCCEECC---CCEeECCCC
Confidence 8999999985 57999999999998763 2232 25667788876 479999999
Q ss_pred cccCCcc
Q psy5613 330 FTGDAFR 336 (1010)
Q Consensus 330 y~G~~c~ 336 (1010)
|+|..|+
T Consensus 301 ~~G~~C~ 307 (324)
T 2ygq_A 301 WHGRHCN 307 (324)
T ss_dssp -------
T ss_pred CcCCCCC
Confidence 9999986
No 9
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.69 E-value=4.4e-17 Score=159.24 Aligned_cols=122 Identities=20% Similarity=0.408 Sum_probs=95.8
Q ss_pred CCCCCCCCCCCCeecccC--CceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeecc-----
Q psy5613 244 DPCFPSPCGSNARCRVQN--EHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICS----- 316 (1010)
Q Consensus 244 d~C~~~~C~~~~~C~~~~--g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~----- 316 (1010)
|+|.++||.++++|++.. ++|+|+|++||+|..|+..+........|...+.|.. .+|.++++|+
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~--------~~C~~~g~C~~~~~~ 72 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTP--------NPCHNGGTCEISEAY 72 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSS--------CCCCTTCEEEECCCE
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCC--------CCCCCCCEecCCCcc
Confidence 578899999999999876 6899999999999999853332222233333444443 3577788998
Q ss_pred --CCCCCceecCCCCcccCCcccCCCCCCCCCCCCCCCCCCCCCCCCeEeecCCceeeeecCccccccc
Q psy5613 317 --VSNHIPICYCPAGFTGDAFRQCSPIPQREPEYRDPCSTTQCGLNAICTVINGAAQCACLLLLQHHIH 383 (1010)
Q Consensus 317 --~~~g~~~C~C~~Gy~G~~c~~C~~i~~~~~~~~deC~~~~C~~~~~C~n~~g~~~C~C~~G~~g~~~ 383 (1010)
++.++|+|.|++||+|..|+ .++|+|+.++|.++++|+++.++|+|.|++||+|...
T Consensus 73 ~~~~~~~~~C~C~~G~~G~~C~----------~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c 131 (143)
T 4d90_A 73 RGDTFIGYVCKCPRGFNGIHCQ----------HNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNC 131 (143)
T ss_dssp ETTEECCEEEECCTTEESTTSC----------EECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTS
T ss_pred ccCCCCCeEeECcCCCcCCCcc----------cCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCc
Confidence 77789999999999999875 4779999999999999999999999999999998654
No 10
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.69 E-value=5.6e-18 Score=169.97 Aligned_cols=151 Identities=24% Similarity=0.563 Sum_probs=110.9
Q ss_pred CCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCC-CCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccCCCCCCC
Q psy5613 106 NHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQP-SPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDCPLD 184 (1010)
Q Consensus 106 ~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~-~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~ 184 (1010)
...++|+|++||+|+. |+ .+|.. .+|..+++|+. .++|+|++||+|. .|+.. .|
T Consensus 14 ~~~~~c~C~~g~~G~~---C~---------~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~------~C~~~-~C--- 68 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGFG---CN---------KFCRPRDDFFGHYACDQ---NGNKTCMEGWMGP------ECNRA-IC--- 68 (169)
T ss_dssp -------CCTTEETTT---TC---------EECCCEEETTEEEEECS---SCCEEECTTEEST------TSCEE-CC---
T ss_pred ccCeeeeCCCcCcCCC---cc---------cccCCCCCcCCCCEeCC---CCeeECCCCCcCC------CCCCC-CC---
Confidence 3468999999999998 86 34654 35777789964 5689999999998 66643 12
Q ss_pred CcccCCcccCCCCCCCC-CCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCC-CCCCCeecccCC
Q psy5613 185 RACQNQKCVDPCPGSCG-YRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSP-CGSNARCRVQNE 262 (1010)
Q Consensus 185 ~~C~~~~C~~~C~~~C~-~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~-C~~~~~C~~~~g 262 (1010)
...|. .++.|++ .|+|+|++||+|..|++ |...+ |.+ ++|+ +
T Consensus 69 ------------~~~C~~~~g~C~~---~~~C~C~~G~~G~~C~~-----------------C~~~~~C~~-g~C~---~ 112 (169)
T 2vj2_A 69 ------------RQGCSPKHGSCKL---PGDCRCQYGWQGLYCDK-----------------CIPHPGCVH-GICN---E 112 (169)
T ss_dssp ------------CTTCCTTTEECSS---TTCCEECTTEESSSSCE-----------------ECCCTTCSS-EECS---S
T ss_pred ------------CCCCCCCCcccCC---CCeeECCCCCCCCCccc-----------------CCCCCCCCC-CCcC---C
Confidence 12343 4677875 58999999999998743 33344 764 4888 5
Q ss_pred ceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCC-CCCceecCCCCcccCCcc
Q psy5613 263 HALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVS-NHIPICYCPAGFTGDAFR 336 (1010)
Q Consensus 263 ~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~-~g~~~C~C~~Gy~G~~c~ 336 (1010)
+|+|+|++||+|..|+.++++|.. ..+|.++++|+++ .++|+|.|++||+|+.|+
T Consensus 113 ~~~C~C~~G~~G~~C~~~~~~C~~-------------------~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce 168 (169)
T 2vj2_A 113 PWQCLCETNWGGQLCDKDLNYCGT-------------------HQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCE 168 (169)
T ss_dssp TTCCEECTTEETTTTCEESCHHHH-------------------TCCCCTTCEEEECSTTCEEEECCTTCCSTTSC
T ss_pred CCEEeCCCCCCCCcccCCCCCCCC-------------------CCCCCCCCEEcCCCCCCcEeECCCCCcCcCcC
Confidence 789999999999999877777753 1367788999996 889999999999999875
No 11
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.68 E-value=5.8e-17 Score=158.39 Aligned_cols=122 Identities=23% Similarity=0.581 Sum_probs=95.4
Q ss_pred CCCCCCCCCCCCcceecC--CCeeeecCCCCcCCCCCCCCCCccCCCCCCC-CcccCCcccCCC-CCCCCCCceEe----
Q psy5613 136 NPCQPSPCGPNSQCREIN--HQAVCSCLPNYFGSPPGCRPECTVNSDCPLD-RACQNQKCVDPC-PGSCGYRARCQ---- 207 (1010)
Q Consensus 136 d~C~~~~C~~~g~C~~~~--g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~-~~C~~~~C~~~C-~~~C~~~~~C~---- 207 (1010)
|+|..+||.++|+|+++. ++|+|.|++||+|. .|+...++... ..|.. +++| +++|.++++|+
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~------~C~~~~~~~~~~~~c~~---~~~C~~~~C~~~g~C~~~~~ 71 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDP------NCSSVVEVASDEEEPTS---AGPCTPNPCHNGGTCEISEA 71 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTT------TTCSCCCCTTTTTSCCC---CCTTSSCCCCTTCEEEECCC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCC------CCccCcccccccccccc---CCcCCCCCCCCCCEecCCCc
Confidence 578899999999999876 68999999999998 66654433221 11111 1223 34788899999
Q ss_pred ---ecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCc
Q psy5613 208 ---VYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEG 279 (1010)
Q Consensus 208 ---~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~ 279 (1010)
++.++|+|+|++||+|..| +.++++|+..||.++++|+++.++|+|+|++||+|+.++.
T Consensus 72 ~~~~~~~~~~C~C~~G~~G~~C-------------~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 72 YRGDTFIGYVCKCPRGFNGIHC-------------QHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp EETTEECCEEEECCTTEESTTS-------------CEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred cccCCCCCeEeECcCCCcCCCc-------------ccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 6778999999999999986 2489999999999999999999999999999999998774
No 12
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.61 E-value=2.1e-16 Score=158.46 Aligned_cols=150 Identities=23% Similarity=0.620 Sum_probs=107.8
Q ss_pred CCceeecCCCCccCCccccccCCCCCCCCCCCCCCCCCCC-CCCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCC
Q psy5613 595 HNPSCTCKAGFTGDPRVFCSRIPPPPPQESPPEYVNPCIP-SPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNT 673 (1010)
Q Consensus 595 ~~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~id~C~~-~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~ 673 (1010)
..++|.|++||+|.. |+ .+|.. ..|.++++|.. ..+|+|++||+|. .|+. .
T Consensus 15 ~~~~c~C~~g~~G~~---C~---------------~~C~~~~~c~~~g~C~~---~g~C~C~~G~~G~--~C~~-----~ 66 (169)
T 2vj2_A 15 GRSAVTCDDYYYGFG---CN---------------KFCRPRDDFFGHYACDQ---NGNKTCMEGWMGP--ECNR-----A 66 (169)
T ss_dssp ------CCTTEETTT---TC---------------EECCCEEETTEEEEECS---SCCEEECTTEEST--TSCE-----E
T ss_pred cCeeeeCCCcCcCCC---cc---------------cccCCCCCcCCCCEeCC---CCeeECCCCCcCC--CCCC-----C
Confidence 468999999999997 75 24543 25777889964 3489999999998 7752 1
Q ss_pred CCCCCccccCCccCCCCCCCCC-CCCeeeeeCCcceeeCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccC-
Q psy5613 674 ECPYDKACINEKCRDPCPGSCG-QGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRD- 751 (1010)
Q Consensus 674 ~C~~~~~C~~~~C~~~C~~~C~-~~~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~- 751 (1010)
+| ...|. .++.|++ +|+|+|++||+|..|+.|. ..+ .|. +++|+.
T Consensus 67 ~C---------------~~~C~~~~g~C~~---~~~C~C~~G~~G~~C~~C~-------------~~~-~C~-~g~C~~~ 113 (169)
T 2vj2_A 67 IC---------------RQGCSPKHGSCKL---PGDCRCQYGWQGLYCDKCI-------------PHP-GCV-HGICNEP 113 (169)
T ss_dssp CC---------------CTTCCTTTEECSS---TTCCEECTTEESSSSCEEC-------------CCT-TCS-SEECSST
T ss_pred CC---------------CCCCCCCCcccCC---CCeeECCCCCCCCCcccCC-------------CCC-CCC-CCCcCCC
Confidence 12 22354 4567875 5799999999999997432 222 255 348875
Q ss_pred ceeecCCCccCCCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeec-CCeeeeeCCCCCccCCCcccc
Q psy5613 752 NVCVCLPDYYGDGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVI-NHSVVCSCPPGTTGSPFIQCK 828 (1010)
Q Consensus 752 ~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~-~g~y~C~C~~G~~G~~~~~C~ 828 (1010)
++|+|++||+|..|+.++++|.. ..+|.++|+|++. .++|+|+|++||+|+. |+
T Consensus 114 ~~C~C~~G~~G~~C~~~~~~C~~--------------------~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~---Ce 168 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKDLNYCGT--------------------HQPCLNGGTCSNTGPDKYQCSCPEGYSGPN---CE 168 (169)
T ss_dssp TCCEECTTEETTTTCEESCHHHH--------------------TCCCCTTCEEEECSTTCEEEECCTTCCSTT---SC
T ss_pred CEEeCCCCCCCCcccCCCCCCCC--------------------CCCCCCCCEEcCCCCCCcEeECCCCCcCcC---cC
Confidence 79999999999999876666542 2578889999986 7899999999999994 75
No 13
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.59 E-value=1.9e-15 Score=181.24 Aligned_cols=177 Identities=27% Similarity=0.676 Sum_probs=131.6
Q ss_pred ccCCCCCCCCCCCCeeeecCCcee---eeCCCCCccCCCCCcccCC--CCCCCCCCCCC----CCCCCCCcceecCCCee
Q psy5613 87 CKNPCVPGTCGEGAICDVVNHAVM---CTCPPGTTGSPFIQCKPIQ--NEPVYTNPCQP----SPCGPNSQCREINHQAV 157 (1010)
Q Consensus 87 C~~~C~~~~C~~~~~C~~~~g~~~---C~C~~G~~g~~~~~C~~~~--~~~~~~d~C~~----~~C~~~g~C~~~~g~~~ 157 (1010)
|.-+|.+.||.++++|.+..|+|. |.|++||+|.. |+... ......++|.. .+|.++|+|++ ++
T Consensus 433 C~C~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~---Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~ 505 (690)
T 3fcs_B 433 CDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQ---CECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQ 505 (690)
T ss_dssp CSCGGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSS---SCCSCC------CCCCSSSSSSCGGGGSEEECS----SS
T ss_pred cccCCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCc---eeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----Ce
Confidence 344666788999999998888888 99999999998 86210 00112367865 45999999984 69
Q ss_pred eecC----CCCcCCCCCCCCCCccC-CCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCC
Q psy5613 158 CSCL----PNYFGSPPGCRPECTVN-SDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLP 232 (1010)
Q Consensus 158 C~C~----~G~~g~~~~C~~~C~~~-~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~ 232 (1010)
|.|+ +||+|. .|+.. ..|.... ..+|.++|+|++ ++|.|++||+|..|+ |
T Consensus 506 C~C~~~~~~Gy~G~------~Ce~~~~~C~~~~-----------~~~C~~~G~C~~----g~C~C~~Gy~G~~Ce-C--- 560 (690)
T 3fcs_B 506 CVCHSSDFGKITGK------YCECDDFSCVRYK-----------GEMCSGHGQCSC----GDCLCDSDWTGYYCN-C--- 560 (690)
T ss_dssp EEECCCSSCCCBST------TSCBCSSCCCBSS-----------SSBGGGSEEEET----TEEEECTTEESSSSC-E---
T ss_pred eEeecCCCCCeeCC------CcCcccCcCcCCC-----------CCCCCCCCEecC----CeeECcCCCcCCCCc-c---
Confidence 9999 999998 67632 2333110 135777899986 889999999999974 2
Q ss_pred CCCCCCCCCCCCCCCC---CCCCCCCeecccCCceeeee-CCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCC
Q psy5613 233 PTPTPTQATPTDPCFP---SPCGSNARCRVQNEHALCEC-LPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGT 308 (1010)
Q Consensus 233 ~~~~~~~~~~~d~C~~---~~C~~~~~C~~~~g~~~C~C-~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~ 308 (1010)
..++++|.. .+|.++|+|++ .+|.| ++||+|..|+.+ ..| +++
T Consensus 561 -------~~~~~~C~~~~g~~C~~~G~C~~----g~C~C~~~Gy~G~~Ce~C-~~C---------------------~~~ 607 (690)
T 3fcs_B 561 -------TTRTDTCMSSNGLLCSGRGKCEC----GSCVCIQPGSYGDTCEKC-PTC---------------------PDA 607 (690)
T ss_dssp -------ECCCTTTBCTTSSBTSSSCEEET----TEEECCSTTCBSTTSCBC-TTS---------------------CCT
T ss_pred -------CCCCCcccCCCCCCCCCCCEEeC----CEEECCCCCccCCCcCcC-CCC---------------------CCC
Confidence 146788985 68999999986 28999 999999998741 111 346
Q ss_pred CCCCeeccCCCCCceecCCCCcccCCcc
Q psy5613 309 CGVQAICSVSNHIPICYCPAGFTGDAFR 336 (1010)
Q Consensus 309 C~~~~~C~~~~g~~~C~C~~Gy~G~~c~ 336 (1010)
|.+++.|++ |..||+|..|+
T Consensus 608 C~~~g~Cv~--------C~~g~tG~~C~ 627 (690)
T 3fcs_B 608 CTFKKECVE--------CKKFDRGALHD 627 (690)
T ss_dssp TTSCCGGGT--------TTTTCCSSSSS
T ss_pred CCCCCCccc--------CCCCCccCCCC
Confidence 777888876 99999999864
No 14
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.58 E-value=4.5e-15 Score=178.10 Aligned_cols=178 Identities=22% Similarity=0.474 Sum_probs=129.6
Q ss_pred CCCCCCCCCCCeecccCCcee---eeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCC
Q psy5613 245 PCFPSPCGSNARCRVQNEHAL---CECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHI 321 (1010)
Q Consensus 245 ~C~~~~C~~~~~C~~~~g~~~---C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~ 321 (1010)
+|...||.++++|.+..|.|. |.|++||+|..|+..+..-... ....|...+ . ..+|.++|+|++
T Consensus 436 ~C~~~pc~n~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~----~~~~C~~~~--~--~~~Cs~~G~C~~---- 503 (690)
T 3fcs_B 436 ACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPS----QQDECSPRE--G--QPVCSQRGECLC---- 503 (690)
T ss_dssp GGGTTCCTTCTTTTTTSEEEETTEEEECTTCCSSSSCCSCC----------CCCCSSSS--S--SCGGGGSEEECS----
T ss_pred CCcCCCCCCCCcccCCCCeEeCCceEeCCCccCCceeeccCccCCc----cCCcCCCCC--C--CCCCCCCCEEEC----
Confidence 577899999999998889998 9999999999997544110000 001122110 0 135888999984
Q ss_pred ceecCC----CCcccCCcccCCCCCCCCCCCCCCCCC---CCCCCCCeEeecCCceeeeecCccccccccc-cCCccccc
Q psy5613 322 PICYCP----AGFTGDAFRQCSPIPQREPEYRDPCST---TQCGLNAICTVINGAAQCACLLLLQHHIHKN-QDMDQYIS 393 (1010)
Q Consensus 322 ~~C~C~----~Gy~G~~c~~C~~i~~~~~~~~deC~~---~~C~~~~~C~n~~g~~~C~C~~G~~g~~~~~-~~~~~~~~ 393 (1010)
++|.|+ +||+|..|+ .++++|.. .+|.++|+|++ ++|.|++||+|..+.+ .++++|..
T Consensus 504 g~C~C~~~~~~Gy~G~~Ce----------~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~ 569 (690)
T 3fcs_B 504 GQCVCHSSDFGKITGKYCE----------CDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMS 569 (690)
T ss_dssp SSEEECCCSSCCCBSTTSC----------BCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCCTTTBC
T ss_pred CeeEeecCCCCCeeCCCcC----------cccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCCCcccC
Confidence 599999 999999987 35578875 48999999987 7999999999986653 23333321
Q ss_pred CCccccccccccccccccccccccCCCCccCCCCCCcccCceeec-CCCceeCCcccCCCCCCCCCCCCCcchhccCCcc
Q psy5613 394 LGYMLCHMDILSSEYIQVYTVQPVIQEDTCNCVPNAECRDGVCVC-LPDYYGDGYVSCRPECVQNSDCPRNKACIRNKCK 472 (1010)
Q Consensus 394 ~g~~~C~~~~~~~~~~~~~~~~p~~~~~~c~C~~~~~C~~~~C~C-~~G~~G~~~~~~~~~C~~~~~C~~~~~C~~~~C~ 472 (1010)
.....|.++|+|++++|.| ++||+|..|+. |
T Consensus 570 --------------------------~~g~~C~~~G~C~~g~C~C~~~Gy~G~~Ce~----C------------------ 601 (690)
T 3fcs_B 570 --------------------------SNGLLCSGRGKCECGSCVCIQPGSYGDTCEK----C------------------ 601 (690)
T ss_dssp --------------------------TTSSBTSSSCEEETTEEECCSTTCBSTTSCB----C------------------
T ss_pred --------------------------CCCCCCCCCCEEeCCEEECCCCCccCCCcCc----C------------------
Confidence 0112588999999999999 99999997652 1
Q ss_pred CCCCCCCCCCCCeeeccCCceeeeCCCCCccCC
Q psy5613 473 NPCVPGTCGEGAICDVINHAVMCTCPPGTTGSP 505 (1010)
Q Consensus 473 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 505 (1010)
..| +++|.+++.|++ |.+||+|..
T Consensus 602 ~~C-~~~C~~~g~Cv~--------C~~g~tG~~ 625 (690)
T 3fcs_B 602 PTC-PDACTFKKECVE--------CKKFDRGAL 625 (690)
T ss_dssp TTS-CCTTTSCCGGGT--------TTTTCCSSS
T ss_pred CCC-CCCCCCCCCccc--------CCCCCccCC
Confidence 123 457888898986 999999996
No 15
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.58 E-value=4.7e-15 Score=175.12 Aligned_cols=137 Identities=26% Similarity=0.517 Sum_probs=102.8
Q ss_pred CCCCCCCCCCCCCCcceecCC-Ceee-ecCCCCcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCc---eEee
Q psy5613 134 YTNPCQPSPCGPNSQCREINH-QAVC-SCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRA---RCQV 208 (1010)
Q Consensus 134 ~~d~C~~~~C~~~g~C~~~~g-~~~C-~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~---~C~~ 208 (1010)
++++|+.+||.++++|+++.+ +|+| .|++||+|.+. .|++..+|.. . ++.|.+++ +|++
T Consensus 2 DIDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~----~CeDiDEC~~------~------p~~C~~gg~~~~CvN 65 (634)
T 1yo8_A 2 DPDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT----HCEDLDECAL------V------PDICFSTSKVPRCVN 65 (634)
T ss_dssp --CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS----SCCBCCTTTT------S------CCCSCCCSSSCCEEE
T ss_pred cccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC----CccccccccC------C------CCcccCCccccceee
Confidence 579999999999999999986 4999 99999999643 4555444432 1 34577788 9999
Q ss_pred cCCCcccc-CCCCCccCCCccccC-CCCCCCCCCCCCCCCCC--CCCCCCCeecccC----CceeeeeCCCCcc--CCCC
Q psy5613 209 YNHNPVCS-CPPGYTGNPFSQCLL-PPTPTPTQATPTDPCFP--SPCGSNARCRVQN----EHALCECLPDYYG--NPYE 278 (1010)
Q Consensus 209 ~~g~~~C~-C~~Gy~g~~c~~C~~-~~~~~~~~~~~~d~C~~--~~C~~~~~C~~~~----g~~~C~C~~Gf~G--~~c~ 278 (1010)
+.++|+|. |++||+|..++.=.+ ........++++++|.. ++|.++++|+++. ++|+|.|++||+| ..|+
T Consensus 66 t~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 66 TQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp CSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred ccCceecccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence 99999999 999999998530000 00011223478999985 6999999999998 9999999999998 5776
Q ss_pred c--CCCCCcc
Q psy5613 279 G--CRPECLI 286 (1010)
Q Consensus 279 ~--~~~eC~~ 286 (1010)
. +++||..
T Consensus 146 ~d~DiDeC~~ 155 (634)
T 1yo8_A 146 EDSDLDGWPN 155 (634)
T ss_dssp ECTTSSSSCS
T ss_pred cccCcccccC
Confidence 4 5677753
No 16
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.58 E-value=3.9e-15 Score=175.82 Aligned_cols=149 Identities=25% Similarity=0.558 Sum_probs=108.0
Q ss_pred cCCCCCCCCCCCCeeeecCC-ceee-eCCCCCccCCCCCcccCCCCCCCCCCCCCCC--CCCCC---cceecCCCeeee-
Q psy5613 88 KNPCVPGTCGEGAICDVVNH-AVMC-TCPPGTTGSPFIQCKPIQNEPVYTNPCQPSP--CGPNS---QCREINHQAVCS- 159 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g-~~~C-~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~--C~~~g---~C~~~~g~~~C~- 159 (1010)
+++|.++||.++++|+++.+ +|+| .|++||+|... .|+ +++||+.+| |.+++ +|+++.++|+|.
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~-~Ce-------DiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~ 74 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGT-HCE-------DLDECALVPDICFSTSKVPRCVNTQPGFHCLP 74 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSS-SCC-------BCCTTTTSCCCSCCCSSSCCEEECSSSEEECC
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCC-Ccc-------ccccccCCCCcccCCccccceeeccCceeccc
Confidence 46777889999999999875 5999 99999999543 286 459998877 99998 999999999999
Q ss_pred cCCCCcCCCCCCCCCCc---------cCCCCCCCCcccCCcccCCCCCCCCCCceEeecC----CCccccCCCCCccCCC
Q psy5613 160 CLPNYFGSPPGCRPECT---------VNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYN----HNPVCSCPPGYTGNPF 226 (1010)
Q Consensus 160 C~~G~~g~~~~C~~~C~---------~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~----g~~~C~C~~Gy~g~~c 226 (1010)
|++||+|. .|+ ....|....+|... +++|.++++|+++. ++|+|.|++||+|+.-
T Consensus 75 C~~Gy~G~------~c~g~g~~~~~~dg~~C~dideC~~~------~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~ 142 (634)
T 1yo8_A 75 CPPRYRGN------QPVGVGLEAAKTEKQVCEPENPCKDK------THNCHKHAECIYLGHFSDPMYKCECQTGYAGDGL 142 (634)
T ss_dssp CCTTEEEC------CCEESSSHHHHSCCCCEEECCTTTTT------CCCCCTTEEEEECCTTCSSSEEEEECTTEEESSS
T ss_pred CCCCcccC------ccccccccccccCCCcccccccccCC------CcccccCccccccccccccceeeeccCCccccCc
Confidence 99999998 332 11112222233321 35788899999998 9999999999998531
Q ss_pred ccccCCCCCCCCCCCCCCCCCC--CCCCCCCeecccCCceeee---eCCCC
Q psy5613 227 SQCLLPPTPTPTQATPTDPCFP--SPCGSNARCRVQNEHALCE---CLPDY 272 (1010)
Q Consensus 227 ~~C~~~~~~~~~~~~~~d~C~~--~~C~~~~~C~~~~g~~~C~---C~~Gf 272 (1010)
.|+. .+++++|.. .+|..+ ++|.|. |+.++
T Consensus 143 -~Ce~--------d~DiDeC~~~~~~C~~~-------~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 143 -ICGE--------DSDLDGWPNLNLVCATN-------ATYHCIKDNCPHLP 177 (634)
T ss_dssp -SEEE--------CTTSSSSCSSCCTTTTT-------CSSSCSCCSSTTSC
T ss_pred -cccc--------ccCcccccCCCCcccCC-------CCcccccccccccc
Confidence 2321 248899863 445422 456665 66653
No 17
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.57 E-value=1.4e-16 Score=159.04 Aligned_cols=137 Identities=26% Similarity=0.592 Sum_probs=97.8
Q ss_pred cCCCC-CCCCCCCCeeeecCCceeeeCCCCCccCC-CCCcccCCCCCCCCCC--CCC--CCC--CCCCcceecCC----C
Q psy5613 88 KNPCV-PGTCGEGAICDVVNHAVMCTCPPGTTGSP-FIQCKPIQNEPVYTNP--CQP--SPC--GPNSQCREINH----Q 155 (1010)
Q Consensus 88 ~~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~g~~-~~~C~~~~~~~~~~d~--C~~--~~C--~~~g~C~~~~g----~ 155 (1010)
+|||. .+||. +++|+++.|+|+|.|++||++.. ..+|+++ ++ |.. .+| .++++|+++.+ +
T Consensus 3 ideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~-------~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~ 74 (162)
T 1uzk_A 3 VNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDT-------RSGNCYLDIRPRGDNGDTACSNEIGVGVSK 74 (162)
T ss_dssp CCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECC-------CCEEEEEEC----------CEEEEEEEECH
T ss_pred cccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCC-------CCCcccCCCcccCCCCCCcccCCcCCcccC
Confidence 46665 47897 68999999999999999999432 1239754 44 754 344 35789999887 8
Q ss_pred eeeecCCCCc-CCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCC--CCccCCCccccCC
Q psy5613 156 AVCSCLPNYF-GSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPP--GYTGNPFSQCLLP 232 (1010)
Q Consensus 156 ~~C~C~~G~~-g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~--Gy~g~~c~~C~~~ 232 (1010)
|+|.|++||. +. .|+. |.. +..++|+|+|++ ||+|.....
T Consensus 75 ~~C~C~~G~~~~~------~C~~---------C~~------------------~~~~~y~C~C~~g~G~~~~~~~~---- 117 (162)
T 1uzk_A 75 ASCCCSLGKAWGT------PCEM---------CPA------------------VNTSEYKILCPGGEGFRPNPITV---- 117 (162)
T ss_dssp HHHHTTTCCEETT------TTEE---------CCC------------------TTSHHHHHHCTTCTTEEECTTTC----
T ss_pred ceeeCCCCCCcCC------Cccc---------CCC------------------CCCCCceeECCCCCCcccCCCCC----
Confidence 9999999998 43 3321 110 135679999998 999875321
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCeecccCCceeeeeCCCCccCC
Q psy5613 233 PTPTPTQATPTDPCFP--SPCGSNARCRVQNEHALCECLPDYYGNP 276 (1010)
Q Consensus 233 ~~~~~~~~~~~d~C~~--~~C~~~~~C~~~~g~~~C~C~~Gf~G~~ 276 (1010)
.++|||||+. .+|.+ ++|+++.++|+|.|++||+|..
T Consensus 118 ------~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 118 ------ILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp ------CEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred ------ccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 1479999985 56985 7999999999999999999975
No 18
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.57 E-value=9.1e-16 Score=149.73 Aligned_cols=126 Identities=18% Similarity=0.374 Sum_probs=89.1
Q ss_pred CCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCC---CCCCCCeecccCCceeeeeCCCC
Q psy5613 196 CPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPS---PCGSNARCRVQNEHALCECLPDY 272 (1010)
Q Consensus 196 C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~---~C~~~~~C~~~~g~~~C~C~~Gf 272 (1010)
|+++|.++++|++. |+|+|++||+|..-. .......++++|+|+.. +|.++++|+++.++|+|.|++||
T Consensus 5 C~~~C~~~~~C~~~---~~C~C~~G~~g~~~~-----~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy 76 (143)
T 2bou_A 5 CARWCPQDSSCVNA---TACRCNPGFSSFSEI-----ITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY 76 (143)
T ss_dssp CCTTCCTTEEESSS---SCEEECTTEECSSSS-----BCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred CcCcCCCCCEEcCC---CEEeCCCCCcCcccc-----ccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence 46688889999874 999999999985200 00001124789999964 89999999999999999999999
Q ss_pred ccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCCcc
Q psy5613 273 YGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDAFR 336 (1010)
Q Consensus 273 ~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~c~ 336 (1010)
+|..++..... .....|.+.++|... .++|.++++|+++.++|+|.|++||+|....
T Consensus 77 ~g~~~~~~~~~-~~~~~C~dideC~~~------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 77 EPVSGAKTFKN-ESENTCQDVDECSSG------QHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp EETTCCSCBSS-GGGCCEEECCHHHHT------CCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred ccCcCcccccc-CCCCCcCCccCccCc------CCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence 99855321100 001112222233321 3578888999999999999999999998753
No 19
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=99.53 E-value=3.7e-16 Score=155.88 Aligned_cols=142 Identities=23% Similarity=0.464 Sum_probs=97.5
Q ss_pred CCCCCC-CCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCC--CCCceEeecC
Q psy5613 134 YTNPCQ-PSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSC--GYRARCQVYN 210 (1010)
Q Consensus 134 ~~d~C~-~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C--~~~~~C~~~~ 210 (1010)
|||||+ .+||. +++|++++++|+|.|++||++.... ..|++.++ .+|... +.+| .++++|+++.
T Consensus 2 dideC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g--~~C~d~~~----~~C~~~------~~~c~~~~~~~C~~~~ 68 (162)
T 1uzk_A 2 DVNECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTR--VGCVDTRS----GNCYLD------IRPRGDNGDTACSNEI 68 (162)
T ss_dssp CCCGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTS--SBEECCCC----EEEEEE------C----------CEEEE
T ss_pred ccccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCC--CcccCCCC----CcccCC------CcccCCCCCCcccCCc
Confidence 679998 48997 6999999999999999999853100 15554321 123321 1122 2467899887
Q ss_pred C----CccccCCCCCc-cCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCC--CCccCC---CCcC
Q psy5613 211 H----NPVCSCPPGYT-GNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLP--DYYGNP---YEGC 280 (1010)
Q Consensus 211 g----~~~C~C~~Gy~-g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~--Gf~G~~---c~~~ 280 (1010)
+ +|+|.|++||. |..|+. |.. +..++|+|.|++ ||+|.. +..+
T Consensus 69 ~~~~~~~~C~C~~G~~~~~~C~~----------------------C~~-----~~~~~y~C~C~~g~G~~~~~~~~~c~d 121 (162)
T 1uzk_A 69 GVGVSKASCCCSLGKAWGTPCEM----------------------CPA-----VNTSEYKILCPGGEGFRPNPITVILED 121 (162)
T ss_dssp EEEECHHHHHTTTCCEETTTTEE----------------------CCC-----TTSHHHHHHCTTCTTEEECTTTCCEEE
T ss_pred CCcccCceeeCCCCCCcCCCccc----------------------CCC-----CCCCCceeECCCCCCcccCCCCCccCc
Confidence 7 89999999998 655421 111 245789999998 999874 3346
Q ss_pred CCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCC
Q psy5613 281 RPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDA 334 (1010)
Q Consensus 281 ~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~ 334 (1010)
||||+.. +++|.+ ++|+++.++|+|.|++||+|+.
T Consensus 122 ideC~~~------------------~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 122 IDECQEL------------------PGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp CCHHHHC------------------GGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred cccccCC------------------CCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 7777643 346764 7999999999999999999975
No 20
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.51 E-value=6.8e-15 Score=143.53 Aligned_cols=111 Identities=23% Similarity=0.511 Sum_probs=85.0
Q ss_pred CCCCCCCeeeecCCceeeeCCCCCccCC------CCCcccCCCCCCCCCCCCCC---CCCCCCcceecCCCeeeecCCCC
Q psy5613 94 GTCGEGAICDVVNHAVMCTCPPGTTGSP------FIQCKPIQNEPVYTNPCQPS---PCGPNSQCREINHQAVCSCLPNY 164 (1010)
Q Consensus 94 ~~C~~~~~C~~~~g~~~C~C~~G~~g~~------~~~C~~~~~~~~~~d~C~~~---~C~~~g~C~~~~g~~~C~C~~G~ 164 (1010)
.+|.++|+|+++ |+|.|++||+|.. ...|+ ++|+|+.. ||.++++|+++.++|+|.|++||
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-------dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy 76 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-------DINECATLSKVSCGKFSDCWNTEGSYDCVCSPGY 76 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-------ECCGGGC----CCCTTEEEEECSSCEEEEECTTE
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-------ccccccCCCCCCCCCCCEEEcCCCCeEeECCCCc
Confidence 578899999875 8999999999852 12376 45899764 89999999999999999999999
Q ss_pred cCCCCCCCCCCcc------CCCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCC
Q psy5613 165 FGSPPGCRPECTV------NSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPF 226 (1010)
Q Consensus 165 ~g~~~~C~~~C~~------~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c 226 (1010)
+|.. ++. ...|...++|..+ +++|.++++|+++.++|+|+|++||+|...
T Consensus 77 ~g~~------~~~~~~~~~~~~C~dideC~~~------~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~ 132 (143)
T 2bou_A 77 EPVS------GAKTFKNESENTCQDVDECSSG------QHQCDSSTVCFNTVGSYSCRCRPGWKPRHG 132 (143)
T ss_dssp EETT------CCSCBSSGGGCCEEECCHHHHT------CCCCCTTSEEEECSSCEEEECCSSSCBCTT
T ss_pred ccCc------CccccccCCCCCcCCccCccCc------CCCCCCCCEEECCCCCEEeeCCCCcccCCC
Confidence 9872 221 1123223334321 357888899999999999999999999875
No 21
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.45 E-value=1.8e-14 Score=135.21 Aligned_cols=105 Identities=28% Similarity=0.642 Sum_probs=84.2
Q ss_pred CCCCCCCCCCCCCCCeeccc-CCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCC
Q psy5613 241 TPTDPCFPSPCGSNARCRVQ-NEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSN 319 (1010)
Q Consensus 241 ~~~d~C~~~~C~~~~~C~~~-~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~ 319 (1010)
+|||+|+.+||.+ +|+++ .++|+|+|++||+|... ++++|.. .|. .++|. ++|++ .
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~--~~~~C~~--------~C~--------~~~C~--~~C~~-~ 58 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPH--EPHRCQM--------FCN--------QTACP--ADCDP-N 58 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEETT--EEEEEEE--------CCC--------SSEEE--CEECT-T
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccCC--CCCcccc--------ccC--------CCCCC--CcccC-C
Confidence 5899999999984 99999 89999999999999853 2344432 122 22443 57888 5
Q ss_pred CCceecCCCCcc---cCCcccCCCCCCCCCCCCCCCCC-CCCCCCCeEeecCCceeeeecCccccc
Q psy5613 320 HIPICYCPAGFT---GDAFRQCSPIPQREPEYRDPCST-TQCGLNAICTVINGAAQCACLLLLQHH 381 (1010)
Q Consensus 320 g~~~C~C~~Gy~---G~~c~~C~~i~~~~~~~~deC~~-~~C~~~~~C~n~~g~~~C~C~~G~~g~ 381 (1010)
++|+|.|++||+ |..| +++|||+. ++| +++|+|+.|+|+|.|++||+|.
T Consensus 59 ~~y~C~C~~Gy~~~~g~~C-----------~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 59 TQASCECPEGYILDDGFIC-----------TDIDECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp STTCEECCTTEEEETTTEE-----------EECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred CCeEeECCCCccCCCCCcc-----------ccccccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 899999999999 6554 36799987 899 6899999999999999999874
No 22
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.42 E-value=1.8e-14 Score=135.14 Aligned_cols=109 Identities=27% Similarity=0.603 Sum_probs=83.0
Q ss_pred CCCCCCCCCCCCCCCcceec-CCCeeeecCCCCcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeecCC
Q psy5613 133 VYTNPCQPSPCGPNSQCREI-NHQAVCSCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNH 211 (1010)
Q Consensus 133 ~~~d~C~~~~C~~~g~C~~~-~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g 211 (1010)
.++|+|+.+||.+ +|+++ .++|+|.|++||+|.. ++ ..+|.. +|.++ +|. ++|++ .+
T Consensus 2 ~dideC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~------~~-~~~C~~--~C~~~--------~C~--~~C~~-~~ 59 (118)
T 1dx5_I 2 EPVDPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIP------HE-PHRCQM--FCNQT--------ACP--ADCDP-NT 59 (118)
T ss_dssp CCCCGGGGCCCSS--EEEECSSSCEEEECCTTEEEET------TE-EEEEEE--CCCSS--------EEE--CEECT-TS
T ss_pred CccccCCCCCCCC--CCCCCCCCCEEeECCCCccccC------CC-CCcccc--ccCCC--------CCC--CcccC-CC
Confidence 4679999999984 99999 8999999999999972 11 111211 12222 333 67887 58
Q ss_pred CccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCC-CCCCCCCeecccCCceeeeeCCCCccCC
Q psy5613 212 NPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFP-SPCGSNARCRVQNEHALCECLPDYYGNP 276 (1010)
Q Consensus 212 ~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~-~~C~~~~~C~~~~g~~~C~C~~Gf~G~~ 276 (1010)
+|+|.|++||++..-..| ++||||+. ++| +++|+++.++|+|.|++||+|..
T Consensus 60 ~y~C~C~~Gy~~~~g~~C-----------~dideC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 60 QASCECPEGYILDDGFIC-----------TDIDECENGGFC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp TTCEECCTTEEEETTTEE-----------EECCHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred CeEeECCCCccCCCCCcc-----------ccccccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence 999999999994321113 68999996 899 79999999999999999999864
No 23
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.39 E-value=1.4e-14 Score=142.05 Aligned_cols=132 Identities=20% Similarity=0.475 Sum_probs=85.0
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
+|||+++||.+ ++|+++.|+|+|.|++||+|+. +. .+|++.. ...|..+|.+.
T Consensus 4 ideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~---~~--------------------~~C~~~~---~~~C~~~~~g~ 56 (147)
T 2w86_A 4 IDECESSPCIN-GVCKNSPGSFICECSSESTLDP---TK--------------------TICIETI---KGTCWQTVIDG 56 (147)
T ss_dssp CCGGGGCCSBT-SEEEEETTEEEEECCTTEEECT---TS--------------------SBEEECC---CEEEEEEEETT
T ss_pred CccCcCCCCCC-CEeECCCCCEEeECCCCcccCC---CC--------------------CeecCCC---CCcccCCCCCC
Confidence 46777778985 6999999999999999999875 21 2344332 23455566665
Q ss_pred CCCCCCCCccCC-CCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCc---cCCCccccCCCCCCCCCCCCC
Q psy5613 168 PPGCRPECTVNS-DCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYT---GNPFSQCLLPPTPTPTQATPT 243 (1010)
Q Consensus 168 ~~~C~~~C~~~~-~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~---g~~c~~C~~~~~~~~~~~~~~ 243 (1010)
+|+... .|.....|.+. .....++.|.. -.|.|+|++||+ |..| ++|
T Consensus 57 ------~C~~~~~~c~~~~~C~~~-------~g~~~g~~C~~--c~~~C~C~~Gy~~~~g~~C--------------~di 107 (147)
T 2w86_A 57 ------RCEININGATLKSQCCSS-------LGAAWGSPCTL--CQVDPICGKGYSRIKGTQC--------------EDI 107 (147)
T ss_dssp ------EEEEEEEEEECHHHHHTT-------TCSEETTTTEE--CCCCTTTCTTEEEEETTEE--------------EEC
T ss_pred ------ccccCCCccccCCccccC-------cCcccCCCccc--CCCcccCCCccccCCCCcc--------------Ccc
Confidence 555321 12111111110 00001112221 238899999996 5553 589
Q ss_pred CCCCC--CCCCCCCeecccCCceeeeeCCCCccCC
Q psy5613 244 DPCFP--SPCGSNARCRVQNEHALCECLPDYYGNP 276 (1010)
Q Consensus 244 d~C~~--~~C~~~~~C~~~~g~~~C~C~~Gf~G~~ 276 (1010)
|||+. .+|.+ ++|+++.++|+|.|++||+|..
T Consensus 108 deC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 108 DECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp CHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCT
T ss_pred ccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCC
Confidence 99985 45985 6999999999999999999875
No 24
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=99.38 E-value=4.8e-14 Score=138.09 Aligned_cols=119 Identities=22% Similarity=0.450 Sum_probs=80.9
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCCCCCccCCC--CCC---ccccccCCCCCCCCCCCCCCeec
Q psy5613 241 TPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLINSD--CPL---SLACIKNHCRDPCPGTCGVQAIC 315 (1010)
Q Consensus 241 ~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~--C~~---~~~C~~~~C~~~c~~~C~~~~~C 315 (1010)
+|||||+++||.+ ++|+++.++|+|.|++||+|+.+.. .|..... |.. ...|... ...|..++.|
T Consensus 2 ~dideC~~~pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~---~C~~~~~~~C~~~~~g~~C~~~------~~~c~~~~~C 71 (147)
T 2w86_A 2 ADIDECESSPCIN-GVCKNSPGSFICECSSESTLDPTKT---ICIETIKGTCWQTVIDGRCEIN------INGATLKSQC 71 (147)
T ss_dssp CCCCGGGGCCSBT-SEEEEETTEEEEECCTTEEECTTSS---BEEECCCEEEEEEEETTEEEEE------EEEEECHHHH
T ss_pred CcCccCcCCCCCC-CEeECCCCCEEeECCCCcccCCCCC---eecCCCCCcccCCCCCCccccC------CCccccCCcc
Confidence 6899999999985 7999999999999999999886432 1211100 000 0011100 0112222234
Q ss_pred cCCCCC----------ceecCCCCcc---cCCcccCCCCCCCCCCCCCCCCC--CCCCCCCeEeecCCceeeeecCcccc
Q psy5613 316 SVSNHI----------PICYCPAGFT---GDAFRQCSPIPQREPEYRDPCST--TQCGLNAICTVINGAAQCACLLLLQH 380 (1010)
Q Consensus 316 ~~~~g~----------~~C~C~~Gy~---G~~c~~C~~i~~~~~~~~deC~~--~~C~~~~~C~n~~g~~~C~C~~G~~g 380 (1010)
.+..++ |.|.|++||+ |..|+ +||||+. ++|.+ ++|+|+.|+|+|.|++||+|
T Consensus 72 ~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~-----------dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g 139 (147)
T 2w86_A 72 CSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCE-----------DIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTL 139 (147)
T ss_dssp HTTTCSEETTTTEECCCCTTTCTTEEEEETTEEE-----------ECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCB
T ss_pred ccCcCcccCCCcccCCCcccCCCccccCCCCccC-----------ccccccCCCCCCCC-CEEECCCCCEEeeCCCCCcc
Confidence 443333 7899999996 76653 6799985 45985 69999999999999999988
Q ss_pred c
Q psy5613 381 H 381 (1010)
Q Consensus 381 ~ 381 (1010)
+
T Consensus 140 ~ 140 (147)
T 2w86_A 140 D 140 (147)
T ss_dssp C
T ss_pred C
Confidence 5
No 25
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.34 E-value=2.4e-12 Score=147.38 Aligned_cols=131 Identities=24% Similarity=0.621 Sum_probs=96.0
Q ss_pred ceeeCCCCcccCCCCCccCCcCCCCCCCCccccCCccCCCCCCCCCCCCeeeeeCCcceeeCCCCCccCCCccCCCCCCC
Q psy5613 650 PSCSCLPNYIGAPPNCRPECVQNTECPYDKACINEKCRDPCPGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIE 729 (1010)
Q Consensus 650 y~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~ 729 (1010)
+.|.|++||.|+ .|+..| .+|.++|+|++ ++|+|+|++||+|..|+.
T Consensus 185 ~~c~C~~g~~G~--~C~~~C----------------------~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~------- 231 (423)
T 2gy5_A 185 IVRRCEAQKWGP--ECNHLC----------------------TACMNNGVCHE--DTGECICPPGFMGRTCEK------- 231 (423)
T ss_dssp EECSSCTTEEST--TSCEEC----------------------CCCCTTCEECT--TTCCEECCTTEESTTSCE-------
T ss_pred cCCcCCCCCCCC--CCCCCC----------------------CCCCCCCEEEC--CCCcEeCCCCccCCCccc-------
Confidence 367788888887 555321 14677788876 356888888888888762
Q ss_pred CCCCCCCCCCCCCCCCCCcccCceeecCCCccCCCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCC
Q psy5613 730 PIQAPEQQADPCICAPNAVCRDNVCVCLPDYYGDGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINH 809 (1010)
Q Consensus 730 ~~~~~~c~~~~c~C~~~g~C~~~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g 809 (1010)
.|.+||+|..|.. .|.. .++|.+++.|. .+
T Consensus 232 -------------------------~C~~g~~g~~C~~---~C~~--------------------~~~C~~~g~C~--~~ 261 (423)
T 2gy5_A 232 -------------------------ACELHTFGRTCKE---RCSG--------------------QEGCKSYVFCL--PD 261 (423)
T ss_dssp -------------------------ECCTTEESTTSCE---ECCS--------------------TTTTTTCCEEE--TT
T ss_pred -------------------------ccCCCCCCCCcCc---cCCC--------------------CCCCCCCCEEC--CC
Confidence 2456677765531 1210 45688888996 45
Q ss_pred eeeeeCCCCCccCCCccccCCccCCCCCCCCCC-CCCCCCCceeecCCceeeecCCCCcCC
Q psy5613 810 SVVCSCPPGTTGSPFIQCKPVIQEPVYTNPCQP-SPCGPNSQCREVNKQAVCSCLPNYFGS 869 (1010)
Q Consensus 810 ~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~g~ 869 (1010)
+|+|.|++||+|. +|+..+..+++++.|.. .+|.++++|.+..+ |.|++||+|.
T Consensus 262 ~~~C~C~~G~~G~---~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~---C~C~~G~~G~ 316 (423)
T 2gy5_A 262 PYGCSCATGWKGL---QCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG---CLCSPGWQGL 316 (423)
T ss_dssp TTEEECCBTCBSG---GGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE---EECCTTCBST
T ss_pred CCeEEeCCCcccc---cccCccCCCCcCCcccccccCCCCCEecCCCc---eECCCCCcCC
Confidence 6799999999999 48877778888888874 48999999998764 9999999999
No 26
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.34 E-value=1.1e-12 Score=156.79 Aligned_cols=186 Identities=25% Similarity=0.548 Sum_probs=121.7
Q ss_pred ccccCCCCCCCCCCCCCCCCCCeecCcceecCCCCccCCCCcCCCCCccCCCCCCCcccccCCccCCCCCCCCCCCCeee
Q psy5613 24 YFCVNSVPPPVQQDTCNCVPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNSDCPSNKACIRNKCKNPCVPGTCGEGAICD 103 (1010)
Q Consensus 24 ~~~~~~~~~~~~~~~c~C~~~~~C~~~~C~C~~G~~g~~~~~~~~eC~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~ 103 (1010)
+.|...|..... ..=+|+++|.|..++|.|++||+|..|+. ..+.. ........|...-...+|.++|+|+
T Consensus 421 ~~C~C~C~~~~~-~s~~Cs~~G~C~~g~C~C~~Gy~G~~Cec-----~~~~~---~~~~~~~~C~~~~~~~~Cs~~G~C~ 491 (687)
T 3k6s_B 421 PQCECRCRDQSR-DRSLCHGKGFLECGICRCDTGYIGKNCEC-----QTQGR---SSQELEGSCRKDNNSIICSGLGDCV 491 (687)
T ss_dssp ECCCCCCCCSSS-CSSTGGGSEEESSSSEEECSSEESTTSCE-----ESSSC---CCSGGGSTTSSSTTSCGGGSSEEEE
T ss_pred ccccccCccCCC-CCCCCCCCCEEeCCEeEcCCCCcCCcccc-----cCCcC---CccccCCCCCCCCCCCcCCCCCEEe
Confidence 455544443333 33468999999999999999999998752 11100 0000001111110124688999999
Q ss_pred ecCCceeeeCC------CCCccCCCCCcccCCCCCCCCCCCCC---CCCCC--CCcceecCCCeeeecCCCCcCCCCCCC
Q psy5613 104 VVNHAVMCTCP------PGTTGSPFIQCKPIQNEPVYTNPCQP---SPCGP--NSQCREINHQAVCSCLPNYFGSPPGCR 172 (1010)
Q Consensus 104 ~~~g~~~C~C~------~G~~g~~~~~C~~~~~~~~~~d~C~~---~~C~~--~g~C~~~~g~~~C~C~~G~~g~~~~C~ 172 (1010)
. | +|.|+ +||+|.. |+ .+.+.|.. .+|.+ +|+|+. .+|.|++||+|.
T Consensus 492 ~--G--~C~C~~~~~~~~G~~G~~---Ce------~~~~~C~~~~~~~C~~~~~G~C~~----g~C~C~~G~~G~----- 549 (687)
T 3k6s_B 492 C--G--QCLCHTSDVPGKLIYGQY---CE------CDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGS----- 549 (687)
T ss_dssp T--T--EEEECCCCSTTCCEESTT---SC------EESSCSCEETTEETSHHHHEEEET----TEEEECTTCCST-----
T ss_pred C--C--EEEcCCCCCCCCCccccc---cc------cccccccCCCCcCcCCCCCCeEEC----CEEEcCCCCcCC-----
Confidence 3 4 99999 9999998 86 34577863 47988 899985 389999999998
Q ss_pred CCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCC
Q psy5613 173 PECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCG 252 (1010)
Q Consensus 173 ~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~ 252 (1010)
.|+-.. ....|... -..+|.++|+|+. ++|.|++||+|..|++| ..| ..+|.
T Consensus 550 -~Cec~~---~~~~C~~~-----~g~~Cs~~G~C~~----g~C~C~~Gy~G~~Ce~c--------------~~C-~~~C~ 601 (687)
T 3k6s_B 550 -ACQCER---TTEGCLNP-----RRVECSGRGRCRC----NVCECHSGYQLPLCQEC--------------PGC-PSPCG 601 (687)
T ss_dssp -TSCSCC---SSCTTBCT-----TCSBTSSSCCBCS----SCBCCSTTCCTTTTCCC--------------TTS-CCCCT
T ss_pred -CCccCC---CCCCCCCC-----CCCCCCCCCcCCC----CEEECCCCCcCCCCCCC--------------CCC-CcccC
Confidence 665210 01122211 0135777899986 57999999999997533 246 36899
Q ss_pred CCCeecccCCceeeeeCCCCccCC
Q psy5613 253 SNARCRVQNEHALCECLPDYYGNP 276 (1010)
Q Consensus 253 ~~~~C~~~~g~~~C~C~~Gf~G~~ 276 (1010)
+++.|+ .|...++|..
T Consensus 602 ~~g~Cv--------~C~~~~~G~~ 617 (687)
T 3k6s_B 602 KYISCA--------ECLKFEKGPF 617 (687)
T ss_dssp TTHHHH--------TTTTSCSCCC
T ss_pred CCCCCC--------cccCCCCCCC
Confidence 999998 3555566654
No 27
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.30 E-value=3.1e-12 Score=146.37 Aligned_cols=161 Identities=24% Similarity=0.660 Sum_probs=113.2
Q ss_pred CceeecCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCCCC
Q psy5613 596 NPSCTCKAGFTGDPRVFCSRIPPPPPQESPPEYVNPCIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTEC 675 (1010)
Q Consensus 596 ~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~id~C~~~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C 675 (1010)
.+.|.|++||+|+. |+ ..| .+|.++|+|.+ ++|+|.|++||+|. +|+..|.+..
T Consensus 184 ~~~c~C~~g~~G~~---C~---------------~~C--~~C~~~G~C~~--~~g~C~C~~G~~G~--~Ce~~C~~g~-- 237 (423)
T 2gy5_A 184 LIVRRCEAQKWGPE---CN---------------HLC--TACMNNGVCHE--DTGECICPPGFMGR--TCEKACELHT-- 237 (423)
T ss_dssp EEECSSCTTEESTT---SC---------------EEC--CCCCTTCEECT--TTCCEECCTTEEST--TSCEECCTTE--
T ss_pred ccCCcCCCCCCCCC---CC---------------CCC--CCCCCCCEEEC--CCCcEeCCCCccCC--CcccccCCCC--
Confidence 46789999999986 85 235 38999999987 45699999999999 8886554421
Q ss_pred CCCccccCCccCCCC--CCCCCCCCeeeeeCCcceeeCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccCce
Q psy5613 676 PYDKACINEKCRDPC--PGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRDNV 753 (1010)
Q Consensus 676 ~~~~~C~~~~C~~~C--~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~~~ 753 (1010)
. +..|.++| .+.|.++++|. .++|+|.|++||+|..|+.
T Consensus 238 -~-----g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~------------------------------- 278 (423)
T 2gy5_A 238 -F-----GRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNE------------------------------- 278 (423)
T ss_dssp -E-----STTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCB-------------------------------
T ss_pred -C-----CCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccC-------------------------------
Confidence 1 11222222 35688888995 5678999999999999861
Q ss_pred eecCCCccCCCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCeeeeeCCCCCccCCCccccCCccC
Q psy5613 754 CVCLPDYYGDGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPGTTGSPFIQCKPVIQE 833 (1010)
Q Consensus 754 C~C~~G~~G~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~y~C~C~~G~~G~~~~~C~~~~~~ 833 (1010)
.|.+||+|..|+. +| +|.++++|++.. .|.|++||+|.. |+.....
T Consensus 279 -~C~~G~~G~~C~~------------------------~C---~C~ngg~C~~~~---~C~C~~G~~G~~---Ce~~~~~ 324 (423)
T 2gy5_A 279 -ACHPGFYGPDCKL------------------------RC---SCNNGEMCDRFQ---GCLCSPGWQGLQ---CEREGIP 324 (423)
T ss_dssp -CCCTTBCSBTTCC------------------------BC---CCTTCCEEETTT---EEECCTTCBSTT---SCBCSSC
T ss_pred -ccCCCCcCCcccc------------------------cc---cCCCCCEecCCC---ceECCCCCcCCC---CccCccC
Confidence 4778999987652 12 577889998765 499999999994 8753211
Q ss_pred CCCCCCCCCCCCCCCCceeecCCceeeecCCCCcCC
Q psy5613 834 PVYTNPCQPSPCGPNSQCREVNKQAVCSCLPNYFGS 869 (1010)
Q Consensus 834 ~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~ 869 (1010)
...+ ...+..+ .|.|.+||.|.
T Consensus 325 -------~~~~-----~~~~~~~--~~~c~~g~~g~ 346 (423)
T 2gy5_A 325 -------RMTP-----KIVDLPD--HIEVNSGKFNP 346 (423)
T ss_dssp -------CCCC-----EECSCCS--BCCEESEEECC
T ss_pred -------CcCc-----ceecCCC--eEEeCCCccCC
Confidence 0111 1111222 48899999996
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.28 E-value=1.4e-12 Score=115.80 Aligned_cols=87 Identities=15% Similarity=0.246 Sum_probs=69.6
Q ss_pred CeeeecCCCCcCCCCCCCCCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCC
Q psy5613 155 QAVCSCLPNYFGSPPGCRPECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPT 234 (1010)
Q Consensus 155 ~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~ 234 (1010)
+|+|.|.+||+|. .|+. ++| .. ..|++..++|+|.|++||+ .|
T Consensus 1 sy~C~C~~g~~g~------~c~~-~~c------~~--------------~pC~n~~~~y~C~C~~G~~--~C-------- 43 (91)
T 1tpg_A 1 SYQVICRDEKTQM------IYQQ-HQS------WL--------------RPVLRSNRVEYCWCNSGRA--QC-------- 43 (91)
T ss_dssp CCCCCCBCSSSCC------BCCS-SCE------EE--------------EECSSSSCEEEEECSSSCC--BC--------
T ss_pred CeeeECCCCCcCC------eECC-Ccc------cC--------------CccccCCCCcEeECCCCCc--cc--------
Confidence 6999999999998 5532 222 11 1244557889999999998 43
Q ss_pred CCCCCC-CCCCCCCCCCCCCCCeecccC--CceeeeeCCCCccCCCCcCCCC
Q psy5613 235 PTPTQA-TPTDPCFPSPCGSNARCRVQN--EHALCECLPDYYGNPYEGCRPE 283 (1010)
Q Consensus 235 ~~~~~~-~~~d~C~~~~C~~~~~C~~~~--g~~~C~C~~Gf~G~~c~~~~~e 283 (1010)
+ +++++|.++||.++|+|++.. ++|+|.|++||+|..|+.+++|
T Consensus 44 -----~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 44 -----HSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp -----CEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred -----ccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCCC
Confidence 2 378999999999999999987 9999999999999999877654
No 29
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.28 E-value=2.5e-12 Score=153.86 Aligned_cols=175 Identities=26% Similarity=0.575 Sum_probs=120.2
Q ss_pred CCCCCCCCeeeeeCCcceeeCCCCCccCCCccCCCCCCCCCC-CCCCCCCC--CCCCCCCcccCceeecC------CCcc
Q psy5613 691 PGSCGQGAQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQ-APEQQADP--CICAPNAVCRDNVCVCL------PDYY 761 (1010)
Q Consensus 691 ~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~~~~-~~~c~~~~--c~C~~~g~C~~~~C~C~------~G~~ 761 (1010)
+..|+++|+|. ..+|.|++||+|..|+ |......... ...|...+ ..|.++|+|+.++|.|+ +||+
T Consensus 434 s~~Cs~~G~C~----~g~C~C~~Gy~G~~Ce-c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~G~C~C~~~~~~~~G~~ 508 (687)
T 3k6s_B 434 RSLCHGKGFLE----CGICRCDTGYIGKNCE-CQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIY 508 (687)
T ss_dssp SSTGGGSEEES----SSSEEECSSEESTTSC-EESSSCCCSGGGSTTSSSTTSCGGGSSEEEETTEEEECCCCSTTCCEE
T ss_pred CCCCCCCCEEe----CCEeEcCCCCcCCccc-ccCCcCCccccCCCCCCCCCCCcCCCCCEEeCCEEEcCCCCCCCCCcc
Confidence 35788889998 2489999999999998 3211111011 11344322 24899999999999999 9999
Q ss_pred CCCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCC--CCeeeecCCeeeeeCCCCCccCCCccccCCccCCCCCCC
Q psy5613 762 GDGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGE--GAICDVINHSVVCSCPPGTTGSPFIQCKPVIQEPVYTNP 839 (1010)
Q Consensus 762 G~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~--~~~C~~~~g~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~ 839 (1010)
|..|+.+...|...+ ..+|.+ +|+|+. | +|.|++||+|.. |+-. .+.+.
T Consensus 509 G~~Ce~~~~~C~~~~------------------~~~C~~~~~G~C~~--g--~C~C~~G~~G~~---Cec~----~~~~~ 559 (687)
T 3k6s_B 509 GQYCECDTINCERYN------------------GQVCGGPGRGLCFC--G--KCRCHPGFEGSA---CQCE----RTTEG 559 (687)
T ss_dssp STTSCEESSCSCEET------------------TEETSHHHHEEEET--T--EEEECTTCCSTT---SCSC----CSSCT
T ss_pred ccccccccccccCCC------------------CcCcCCCCCCeEEC--C--EEEcCCCCcCCC---CccC----CCCCC
Confidence 999986655554210 346877 889985 3 899999999995 7622 13477
Q ss_pred CCCC---CCCCCCceeecCCceeeecCCCCcCCCCCCCCCCccCCCCCCcccccCCcccCCCCCCCCCCCeeeecCCCce
Q psy5613 840 CQPS---PCGPNSQCREVNKQAVCSCLPNYFGSPPNCRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHSPI 916 (1010)
Q Consensus 840 C~~~---~C~~~~~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~ 916 (1010)
|... +|.++|+|+. ++|.|++||+|. .|+.-. .|+++|.++++|+
T Consensus 560 C~~~~g~~Cs~~G~C~~----g~C~C~~Gy~G~------~Ce~c~---------------~C~~~C~~~g~Cv------- 607 (687)
T 3k6s_B 560 CLNPRRVECSGRGRCRC----NVCECHSGYQLP------LCQECP---------------GCPSPCGKYISCA------- 607 (687)
T ss_dssp TBCTTCSBTSSSCCBCS----SCBCCSTTCCTT------TTCCCT---------------TSCCCCTTTHHHH-------
T ss_pred CCCCCCCCCCCCCcCCC----CEEECCCCCcCC------CCCCCC---------------CCCcccCCCCCCC-------
Confidence 8654 7999999987 379999999999 554311 1345788888886
Q ss_pred eeCCCCCcCCCCCCcc
Q psy5613 917 CTCRPGFTGEPRIRCS 932 (1010)
Q Consensus 917 C~C~~G~~G~~~~~C~ 932 (1010)
.|...++|.....|.
T Consensus 608 -~C~~~~~G~~~~~C~ 622 (687)
T 3k6s_B 608 -ECLKFEKGPFGKNCS 622 (687)
T ss_dssp -TTTTSCSCCCSSCSS
T ss_pred -cccCCCCCCCCcccc
Confidence 355555554322554
No 30
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.27 E-value=1.6e-12 Score=115.51 Aligned_cols=82 Identities=18% Similarity=0.301 Sum_probs=66.9
Q ss_pred CccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCC-cCCCCCccCCCC
Q psy5613 212 NPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYE-GCRPECLINSDC 290 (1010)
Q Consensus 212 ~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~-~~~~eC~~~~~C 290 (1010)
+|+|+|++||+|..+ ++++|...||. +..++|+|+|++||+ .|+ .++++|..
T Consensus 1 sy~C~C~~g~~g~~c---------------~~~~c~~~pC~------n~~~~y~C~C~~G~~--~C~~~~~~~C~~---- 53 (91)
T 1tpg_A 1 SYQVICRDEKTQMIY---------------QQHQSWLRPVL------RSNRVEYCWCNSGRA--QCHSVPVKSCSE---- 53 (91)
T ss_dssp CCCCCCBCSSSCCBC---------------CSSCEEEEECS------SSSCEEEEECSSSCC--BCCEECEEECSS----
T ss_pred CeeeECCCCCcCCeE---------------CCCcccCCccc------cCCCCcEeECCCCCc--ccccCcCCcccC----
Confidence 589999999999864 57888877765 457899999999998 676 45666543
Q ss_pred CCccccccCCCCCCCCCCCCCCeeccCCC--CCceecCCCCcccCCcc
Q psy5613 291 PLSLACIKNHCRDPCPGTCGVQAICSVSN--HIPICYCPAGFTGDAFR 336 (1010)
Q Consensus 291 ~~~~~C~~~~C~~~c~~~C~~~~~C~~~~--g~~~C~C~~Gy~G~~c~ 336 (1010)
.+|.++|+|++.. ++|+|.|++||+|..|+
T Consensus 54 ----------------~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce 85 (91)
T 1tpg_A 54 ----------------PRCFNGGTCQQALYFSDFVCQCPEGFAGKSCE 85 (91)
T ss_dssp ----------------CCSCTTCEEEEESSSSCEEEECCTTCBSSSCC
T ss_pred ----------------CCCCCCCEeecCCCCCCeEeECCCCCcCCcCC
Confidence 2577789999887 89999999999999986
No 31
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.15 E-value=3.4e-11 Score=143.07 Aligned_cols=100 Identities=24% Similarity=0.540 Sum_probs=34.9
Q ss_pred eee-eCCCCCccCCCcccCCCCCCCCCCCCCcCCCCCCCCccccc----CCCeeeecCCCccCCCCCCcCCCccCCCCCC
Q psy5613 493 VMC-TCPPGTTGSPFIQCKPVQNEPVYTNPCQPSPCGPNSQCREV----HKQAVCSCLPNYFGSPPNCRPECTVNSDCPL 567 (1010)
Q Consensus 493 ~~C-~C~~G~~G~~~~~C~~~~~~~~~~~~C~~~~C~~~g~C~~~----~g~~~C~C~~G~~G~~~~C~~~C~~~~~C~~ 567 (1010)
++| .|++||.|.. |+ ....|.+.+|.++++|.+. ..+++|.|++||+|. .|+
T Consensus 418 ~~C~~C~~Gy~G~~---c~-------~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~--~Ce----------- 474 (525)
T 4aqs_A 418 ERCDVCKEGFYDLS---AE-------DPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQ--RCD----------- 474 (525)
T ss_dssp TTTCEECTTEECCC---TT-------STTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCST--TTC-----------
T ss_pred CcccCCCCCCcCCC---CC-------CCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCC--Ccc-----------
Confidence 345 6888888875 53 4566777777777666532 235778888888887 332
Q ss_pred CccccCCcccCCCCCCCCCCceeeccCCCceeecCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccC-
Q psy5613 568 DKACFNQKCVDPCPGTCGQNANCRVINHNPSCTCKAGFTGDPRVFCSRIPPPPPQESPPEYVNPCIPSPCGPYSQCRDI- 646 (1010)
Q Consensus 568 ~~~C~~~~C~~~C~~~C~~~~~C~~~~~~~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~id~C~~~~C~~~g~C~~~- 646 (1010)
.|++||.|.. .+++.|.+.+|.+++.+.+.
T Consensus 475 --------------------------------~C~~G~~g~~-----------------~~~~~C~~C~C~~~gs~~~~C 505 (525)
T 4aqs_A 475 --------------------------------QCLPQHWGLS-----------------NDLDGCRPCDCDLGGALNNSC 505 (525)
T ss_dssp --------------------------------C-----------------------------------------------
T ss_pred --------------------------------cCCCCccCCC-----------------CCCCCCcCCCCCCCCccCCcc
Confidence 3566777653 24677877788887766543
Q ss_pred -CCCceeeCCCCcccCCCCCc
Q psy5613 647 -NGSPSCSCLPNYIGAPPNCR 666 (1010)
Q Consensus 647 -~g~y~C~C~~G~~g~~~~C~ 666 (1010)
..+++|.|++||+|. +|+
T Consensus 506 ~~~tG~C~C~~G~~G~--~Ce 524 (525)
T 4aqs_A 506 SEDSGQCSCLPHMIGR--QCN 524 (525)
T ss_dssp ---------------------
T ss_pred CCCCCeeECCCCCcCC--CCC
Confidence 234489999999998 665
No 32
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.10 E-value=3.9e-11 Score=111.63 Aligned_cols=95 Identities=21% Similarity=0.421 Sum_probs=66.2
Q ss_pred CCCCCCCCCC--------CCCCCeecccCCceeeeeCCCCccCCCCcCC--CCCccCCCCCCccccccCCCCCCCCCCCC
Q psy5613 241 TPTDPCFPSP--------CGSNARCRVQNEHALCECLPDYYGNPYEGCR--PECLINSDCPLSLACIKNHCRDPCPGTCG 310 (1010)
Q Consensus 241 ~~~d~C~~~~--------C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~--~eC~~~~~C~~~~~C~~~~C~~~c~~~C~ 310 (1010)
+|+|+|+.+| |.++++|+++.++|+|.|++||+|..|+..+ ++|..+ .+.|.
T Consensus 4 ~d~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~------------------~~~C~ 65 (114)
T 1aut_L 4 VDGDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLD------------------NGGCT 65 (114)
T ss_dssp ----CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSG------------------GGGCS
T ss_pred eecccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCC------------------CCCCC
Confidence 6899999999 9999999999999999999999999988543 355432 23454
Q ss_pred CCeeccCCCCCceecCCCCcccCCcc-cCCCCCCCCCCCCCCCCCCCCCCCCeEeec
Q psy5613 311 VQAICSVSNHIPICYCPAGFTGDAFR-QCSPIPQREPEYRDPCSTTQCGLNAICTVI 366 (1010)
Q Consensus 311 ~~~~C~~~~g~~~C~C~~Gy~G~~c~-~C~~i~~~~~~~~deC~~~~C~~~~~C~n~ 366 (1010)
. +|+++.++|+|.|++||+|.... .|.+ ....||...++|+..
T Consensus 66 ~--~C~n~~g~y~C~C~~G~~~~~~g~~C~~-----------~~~~pC~~~~~~i~~ 109 (114)
T 1aut_L 66 H--YCLEEVGWRRCSCAPGYKLGDDLLQCHP-----------AVKFPCGRPWKRMEK 109 (114)
T ss_dssp S--EEEECSSSEEEECCTTEEECTTSSCEEE-----------CSSSCTTCCC-----
T ss_pred C--EeECCCCCEEeECCCCeeECCCCCccCc-----------CcccCCCCCCccCCC
Confidence 3 89999999999999999965432 1321 124578887777654
No 33
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.10 E-value=5.9e-11 Score=103.25 Aligned_cols=73 Identities=27% Similarity=0.529 Sum_probs=60.8
Q ss_pred CCCCCCCCC-CCCCCCCeecccCCceeeeeCCCCc--cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeecc
Q psy5613 240 ATPTDPCFP-SPCGSNARCRVQNEHALCECLPDYY--GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICS 316 (1010)
Q Consensus 240 ~~~~d~C~~-~~C~~~~~C~~~~g~~~C~C~~Gf~--G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~ 316 (1010)
++|||+|+. +||.+ ++|+++.++|+|.|++||+ |..|+ +++||.. ..+|.+ ++|+
T Consensus 2 C~dideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~-------------------~~~C~~-~~C~ 59 (82)
T 1emn_A 2 AVDMDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDECSV-------------------GNPCGN-GTCK 59 (82)
T ss_dssp CCCCCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCGGGT-------------------CCTTSS-SCEE
T ss_pred CCccccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccC-CcccccC-------------------CCCCCC-CEeE
Confidence 478999995 89975 8999999999999999997 77773 5666653 235654 6999
Q ss_pred CCCCCceecCCCCcccCC
Q psy5613 317 VSNHIPICYCPAGFTGDA 334 (1010)
Q Consensus 317 ~~~g~~~C~C~~Gy~G~~ 334 (1010)
++.++|+|.|++||+|+.
T Consensus 60 n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 60 NVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp ECSSSEEECCSSSSCCCS
T ss_pred CCCCCEEeECCCCeEeCC
Confidence 999999999999999876
No 34
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.09 E-value=5.3e-11 Score=103.59 Aligned_cols=69 Identities=26% Similarity=0.720 Sum_probs=59.3
Q ss_pred cCCCCC-CCCCCCCeeeecCCceeeeCCCCCc--cCCCCCcccCCCCCCCCCCCC-CCCCCCCCcceecCCCeeeecCCC
Q psy5613 88 KNPCVP-GTCGEGAICDVVNHAVMCTCPPGTT--GSPFIQCKPIQNEPVYTNPCQ-PSPCGPNSQCREINHQAVCSCLPN 163 (1010)
Q Consensus 88 ~~~C~~-~~C~~~~~C~~~~g~~~C~C~~G~~--g~~~~~C~~~~~~~~~~d~C~-~~~C~~~g~C~~~~g~~~C~C~~G 163 (1010)
+|+|.. ++|.+ ++|+++.|+|+|.|++||+ |.. |++ +|+|. .+||.+ ++|+++.++|+|.|++|
T Consensus 5 ideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~---C~d-------ideC~~~~~C~~-~~C~n~~g~y~C~C~~G 72 (82)
T 1emn_A 5 MDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNE---CVD-------TDECSVGNPCGN-GTCKNVIGGFECTCEEG 72 (82)
T ss_dssp CCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTE---EEE-------CCGGGTCCTTSS-SCEEECSSSEEECCSSS
T ss_pred cccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCc---cCC-------cccccCCCCCCC-CEeECCCCCEEeECCCC
Confidence 567764 78986 8999999999999999998 555 864 58897 789986 79999999999999999
Q ss_pred CcCCC
Q psy5613 164 YFGSP 168 (1010)
Q Consensus 164 ~~g~~ 168 (1010)
|+|++
T Consensus 73 ~~g~~ 77 (82)
T 1emn_A 73 FEPGP 77 (82)
T ss_dssp SCCCS
T ss_pred eEeCC
Confidence 99973
No 35
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.04 E-value=9e-11 Score=103.20 Aligned_cols=71 Identities=24% Similarity=0.560 Sum_probs=56.5
Q ss_pred cCCCCCCC--CCCCCeeeecCCceeeeCCCCCccCC--CCCcccCCCCCCCCCCCCCCC--CCCCCcceecCCCeeeecC
Q psy5613 88 KNPCVPGT--CGEGAICDVVNHAVMCTCPPGTTGSP--FIQCKPIQNEPVYTNPCQPSP--CGPNSQCREINHQAVCSCL 161 (1010)
Q Consensus 88 ~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~g~~--~~~C~~~~~~~~~~d~C~~~~--C~~~g~C~~~~g~~~C~C~ 161 (1010)
+|||..++ |.+ ++|+++.|+|+|.|++||++.. ...|+ ++|||+..| |. +++|++++|+|+|.|+
T Consensus 3 ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-------dideC~~~~~~C~-~~~C~n~~g~y~C~C~ 73 (86)
T 1lmj_A 3 IDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-------DIDECQRDPLLCR-GGVCHNTEGSYRCECP 73 (86)
T ss_dssp CCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-------ECCHHHHCSSTTT-TSEEEEETTEEEEESC
T ss_pred cccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-------CcccccCCCCcCC-CCEeEcCCCCEEEECc
Confidence 45665544 875 5999999999999999998431 12386 458997665 76 5899999999999999
Q ss_pred CCCcCC
Q psy5613 162 PNYFGS 167 (1010)
Q Consensus 162 ~G~~g~ 167 (1010)
+||++.
T Consensus 74 ~G~~~~ 79 (86)
T 1lmj_A 74 PGHQLS 79 (86)
T ss_dssp TTSCCC
T ss_pred CCcccC
Confidence 999987
No 36
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.03 E-value=1.9e-10 Score=136.65 Aligned_cols=238 Identities=21% Similarity=0.370 Sum_probs=93.7
Q ss_pred eeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccCCCC
Q psy5613 102 CDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDC 181 (1010)
Q Consensus 102 C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C 181 (1010)
+......++|.|++||+|.. |+ ...+.+...|+.. ++|.+....+.|.|... +. .|..+..
T Consensus 272 ~~~g~~~g~C~C~~G~~G~~---Ce------~C~~g~~~~p~~~-~~c~~~~~~~~C~C~~~--~~------~C~~d~~- 332 (525)
T 4aqs_A 272 EVEGMVHGHCMCRHNTKGLN---CE------LCMDFYHDLPWRP-AEGRNSNACKKCNCNEH--SS------SCHFDMA- 332 (525)
T ss_dssp -CCSCCCCEECCCTTEESSS---SC------EECTTCCSSCCCC-CBTTBCCCCCCCCCTTS--CS------EEEECHH-
T ss_pred CCCCCcCccccCcCCCcCCC---Cc------CCCCccCCCccCC-CcccCCCcccccccCCC--CC------CCCCCcc-
Confidence 33344467999999999998 76 3457777788864 67777777778888532 32 3332211
Q ss_pred CCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCC-CCCCCCCCCCCCC-----CCC
Q psy5613 182 PLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQ-ATPTDPCFPSPCG-----SNA 255 (1010)
Q Consensus 182 ~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~-~~~~d~C~~~~C~-----~~~ 255 (1010)
.+.. ..+.+++.| +.|..||.|..|+.|...+...... ....+.+....|. +..
T Consensus 333 ----~c~~--------~~~~~gg~C--------~~C~~g~~G~~Ce~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~ 392 (525)
T 4aqs_A 333 ----VFLA--------TGNVSGGVC--------DNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGG 392 (525)
T ss_dssp ----HHHH--------TTSSCCEEE--------ESCCTTEESTTSCEECTTEEECSSSCTTCTTCEEECCCCTTTBSGGG
T ss_pred ----cccc--------cCccCCCcc--------cCCCCCCCCCCcccccCcccccCCCCCCCCCCCcCCCCCCCCCCCCc
Confidence 0000 112233444 3455555555554443222111000 0011111111111 111
Q ss_pred eec------ccCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCC
Q psy5613 256 RCR------VQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAG 329 (1010)
Q Consensus 256 ~C~------~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~G 329 (1010)
.|. .......|.|.++|.|..|+.+.+-. .+..|.....|...+|.. .+.|.+++.|... +++|.|++|
T Consensus 393 ~C~~~~~~~~~~~~~~C~C~~g~~G~~C~~C~~Gy-~G~~c~~~~~C~~C~C~~--~gtc~~~~~Cd~~--tg~C~C~~g 467 (525)
T 4aqs_A 393 ICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGF-YDLSAEDPYGCKSCACNP--LGTIPGGNPCDSE--TGYCYCKRL 467 (525)
T ss_dssp CCCCSCBGGGTBCSSCCCBCTTEETTTTCEECTTE-ECCCTTSTTSSEECCCCT--TTBCCSSCCBCTT--TCCBCBCTT
T ss_pred cccCCCCCCcCCCCCccCCCCCCCCCcccCCCCCC-cCCCCCCCCCCccCCCCC--CceecCCCcccCC--CCEEECCCC
Confidence 111 11123445555555555554321110 011122222344444443 4556666667554 458999999
Q ss_pred cccCCcccCCCCCCCCCCCCCCCCCCCCCCCCeEeec--CCceeeeecCccccccc
Q psy5613 330 FTGDAFRQCSPIPQREPEYRDPCSTTQCGLNAICTVI--NGAAQCACLLLLQHHIH 383 (1010)
Q Consensus 330 y~G~~c~~C~~i~~~~~~~~deC~~~~C~~~~~C~n~--~g~~~C~C~~G~~g~~~ 383 (1010)
|+|..|++|.+--.....++++|.+.+|.+++.+.+. ..+++|.|++||+|..+
T Consensus 468 ~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~C 523 (525)
T 4aqs_A 468 VTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQC 523 (525)
T ss_dssp CCSTTTCC------------------------------------------------
T ss_pred CcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCC
Confidence 9999998775421112245678988889888877654 33458999999998643
No 37
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.02 E-value=7.6e-11 Score=103.66 Aligned_cols=72 Identities=26% Similarity=0.528 Sum_probs=58.5
Q ss_pred CCCCCCCCC--CCCCCeecccCCceeeeeCCCCc-----cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCee
Q psy5613 242 PTDPCFPSP--CGSNARCRVQNEHALCECLPDYY-----GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAI 314 (1010)
Q Consensus 242 ~~d~C~~~~--C~~~~~C~~~~g~~~C~C~~Gf~-----G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~ 314 (1010)
|||||+..| |.+ ++|+++.++|+|.|++||+ |..|+ +++||... +..|. +++
T Consensus 2 dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~------------------~~~C~-~~~ 60 (86)
T 1lmj_A 2 DIDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRD------------------PLLCR-GGV 60 (86)
T ss_dssp CCCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHC------------------SSTTT-TSE
T ss_pred ccccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCC------------------CCcCC-CCE
Confidence 789999766 964 5999999999999999998 45554 56666543 33565 579
Q ss_pred ccCCCCCceecCCCCcccCC
Q psy5613 315 CSVSNHIPICYCPAGFTGDA 334 (1010)
Q Consensus 315 C~~~~g~~~C~C~~Gy~G~~ 334 (1010)
|+++.|+|+|.|++||++..
T Consensus 61 C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 61 CHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EEEETTEEEEESCTTSCCCS
T ss_pred eEcCCCCEEEECcCCcccCC
Confidence 99999999999999999875
No 38
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.01 E-value=2.5e-10 Score=110.96 Aligned_cols=76 Identities=24% Similarity=0.593 Sum_probs=59.8
Q ss_pred CCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeec-cCC
Q psy5613 240 ATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAIC-SVS 318 (1010)
Q Consensus 240 ~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C-~~~ 318 (1010)
++++|+|+++||.++++|+++.++|+|.|++||+|..|+. +++|... ++.|.+ +| +++
T Consensus 45 c~dideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~-~deC~~~------------------~~~C~~--~C~~n~ 103 (146)
T 1x7a_L 45 YVDGDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCEL-DATCNIK------------------NGRCKQ--FCKTGA 103 (146)
T ss_dssp -----CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCE-ECCTTSG------------------GGSCSS--BCCCCS
T ss_pred CCCcCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCC-CccccCC------------------CCCCcC--CCCCCC
Confidence 4799999999999999999999999999999999999874 3666542 235654 89 899
Q ss_pred CCCceecCCCCcc----cCCcc
Q psy5613 319 NHIPICYCPAGFT----GDAFR 336 (1010)
Q Consensus 319 ~g~~~C~C~~Gy~----G~~c~ 336 (1010)
.++|+|.|++||+ |..|+
T Consensus 104 ~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 104 DSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp SSCCCCBCCTTEEECTTSSSEE
T ss_pred CCCEEeEcCCCcEeCCCCCcCC
Confidence 9999999999999 55543
No 39
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=99.00 E-value=2.1e-10 Score=106.66 Aligned_cols=63 Identities=27% Similarity=0.461 Sum_probs=53.9
Q ss_pred CCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCC--CCCCCCcceecCCCeeeecCCCCcCC
Q psy5613 96 CGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPS--PCGPNSQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 96 C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~--~C~~~g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
|.++|+|+++.++|+|.|++||+|+. |+++ .++++|..+ +|.+ +|+++.++|+|.|++||+|.
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~---C~~~----~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~ 86 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRF---CQRE----VSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLG 86 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTT---SCEE----CCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEEC
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCC---cCcC----CcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeEC
Confidence 88999999999999999999999998 9864 234678743 4654 89999999999999999975
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.96 E-value=1e-10 Score=118.34 Aligned_cols=77 Identities=27% Similarity=0.650 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCC-CCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCC
Q psy5613 240 ATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCR-PECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVS 318 (1010)
Q Consensus 240 ~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~-~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~ 318 (1010)
+.++|+|+++||.++|+|++..++|+|.|++||+|..|+..+ ++|... ++.|.+ +|+++
T Consensus 39 c~dideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~------------------~~~C~~--~C~n~ 98 (195)
T 1nfu_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD------------------NGDCDQ--FCHEE 98 (195)
T ss_dssp ------------------------------------------CCGGGTG------------------GGGCSS--EEEEE
T ss_pred CCCCcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCC------------------CCCCCC--EeECC
Confidence 379999999999999999999999999999999999998766 677643 235664 89999
Q ss_pred CCCceecCCCCcc----cCCcc
Q psy5613 319 NHIPICYCPAGFT----GDAFR 336 (1010)
Q Consensus 319 ~g~~~C~C~~Gy~----G~~c~ 336 (1010)
.++|+|.|++||+ |..|+
T Consensus 99 ~gsy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 99 QNSVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp TTEEEEECCTTEEECTTSSCEE
T ss_pred CCCeEEECCCCceeCCCCCccc
Confidence 9999999999999 66654
No 41
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.96 E-value=2.7e-10 Score=100.31 Aligned_cols=70 Identities=29% Similarity=0.570 Sum_probs=56.5
Q ss_pred CCCCCCCCC--CCCCCeecccCCceeeeeCCCCc----cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeec
Q psy5613 242 PTDPCFPSP--CGSNARCRVQNEHALCECLPDYY----GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAIC 315 (1010)
Q Consensus 242 ~~d~C~~~~--C~~~~~C~~~~g~~~C~C~~Gf~----G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C 315 (1010)
|||||+..| | ++++|+++.++|+|.|++||+ |..|+ +++||.. ++|. ++|
T Consensus 2 dideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~--------------------~~C~--~~C 57 (87)
T 1z6c_A 2 DVDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSE--------------------NMCA--QLC 57 (87)
T ss_dssp CSCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHH--------------------SCCS--SEE
T ss_pred ccccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCC--------------------CCCC--CEE
Confidence 789999877 8 789999999999999999999 55664 5666642 2464 689
Q ss_pred cCCCCCceecCCCCcccCCcc
Q psy5613 316 SVSNHIPICYCPAGFTGDAFR 336 (1010)
Q Consensus 316 ~~~~g~~~C~C~~Gy~G~~c~ 336 (1010)
+++.++|+|.|+ ||.|..++
T Consensus 58 ~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 58 VNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp CCCSSSCCEECC-SSSCCBCC
T ss_pred EccCCCEEEECC-CCcCCccc
Confidence 999999999998 77776654
No 42
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.93 E-value=1.7e-10 Score=110.55 Aligned_cols=77 Identities=27% Similarity=0.650 Sum_probs=26.5
Q ss_pred CCCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCC-CCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCC
Q psy5613 240 ATPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCR-PECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVS 318 (1010)
Q Consensus 240 ~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~-~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~ 318 (1010)
+.++|+|+++||.++|+|+++.++|+|.|++||+|..|+..+ ++|... ++.|.+ +|+++
T Consensus 39 c~d~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~------------------~~~C~~--~C~~~ 98 (134)
T 2vh0_B 39 YKDGDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLD------------------NGDCDQ--FCHEE 98 (134)
T ss_dssp ------------------------------------------CCGGGTG------------------GGGCSS--EEEEE
T ss_pred CCCcCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccC------------------CCCCCC--EeECC
Confidence 378999999999999999999999999999999999988766 667542 235654 89999
Q ss_pred CCCceecCCCCcc----cCCcc
Q psy5613 319 NHIPICYCPAGFT----GDAFR 336 (1010)
Q Consensus 319 ~g~~~C~C~~Gy~----G~~c~ 336 (1010)
.++|+|.|++||+ |..|+
T Consensus 99 ~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 99 QNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp TTEEEEECCTTEEECTTSSCEE
T ss_pred CCCEEEECCCCcEECCCCCccC
Confidence 9999999999999 66653
No 43
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.93 E-value=5.4e-10 Score=108.56 Aligned_cols=67 Identities=25% Similarity=0.643 Sum_probs=58.3
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCC--CCCCCCcc-eecCCCeeeecCCCC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPS--PCGPNSQC-REINHQAVCSCLPNY 164 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~--~C~~~g~C-~~~~g~~~C~C~~G~ 164 (1010)
+|+|.++||.++|+|+++.++|+|.|++||+|.. |+++ |+|... +|.+ +| +++.|+|+|.|++||
T Consensus 48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~~-------deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKN---CELD-------ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp --CCSSCSSCTTCEEEECSSCEEEECCSSEESTT---TCEE-------CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTE
T ss_pred cCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCc---CCCC-------ccccCCCCCCcC--CCCCCCCCCEEeEcCCCc
Confidence 5789899999999999999999999999999987 9743 888753 6765 99 999999999999999
Q ss_pred cC
Q psy5613 165 FG 166 (1010)
Q Consensus 165 ~g 166 (1010)
++
T Consensus 116 ~l 117 (146)
T 1x7a_L 116 RL 117 (146)
T ss_dssp EE
T ss_pred Ee
Confidence 93
No 44
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.92 E-value=7.4e-10 Score=107.26 Aligned_cols=79 Identities=29% Similarity=0.627 Sum_probs=63.1
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCC
Q psy5613 241 TPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNH 320 (1010)
Q Consensus 241 ~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 320 (1010)
+++|+|+++||.++++|+++.++|+|.|++||+|..|+..+++|... ++. .+.|.. +|+++.+
T Consensus 45 ~did~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c------------~~~---~~~C~~--~C~~~~g 107 (142)
T 2c4f_L 45 SDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLIC------------VNE---NGGCEQ--YCSDHTG 107 (142)
T ss_dssp TTCCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCST------------TTG---GGGCSS--EEECCTT
T ss_pred CccCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccc------------cCC---CCCccC--EeECCCC
Confidence 68999999999999999999999999999999999998655554311 111 224442 8999999
Q ss_pred -CceecCCCCcc----cCCcc
Q psy5613 321 -IPICYCPAGFT----GDAFR 336 (1010)
Q Consensus 321 -~~~C~C~~Gy~----G~~c~ 336 (1010)
+|+|.|++||+ |..|+
T Consensus 108 ~~y~C~C~~Gy~l~~dG~~C~ 128 (142)
T 2c4f_L 108 TKRSCRCHEGYSLLADGVSCT 128 (142)
T ss_dssp SCCEEECCTTEEECTTSSCEE
T ss_pred CCEEEECCCCceECCCCCCCC
Confidence 99999999999 66543
No 45
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.89 E-value=5.5e-10 Score=108.16 Aligned_cols=69 Identities=19% Similarity=0.505 Sum_probs=58.7
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCC---cceecCC-CeeeecCCC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNS---QCREINH-QAVCSCLPN 163 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g---~C~~~~g-~~~C~C~~G 163 (1010)
+|+|.++||.++|+|+++.++|+|.|++||+|+. |++ ++++|...++.+++ +|+++.+ +|+|.|++|
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~---C~~------~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~G 117 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRN---CET------HKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEG 117 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTT---SCE------EGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTT
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCc---ccc------CccccccccCCCCCccCEeECCCCCCEEEECCCC
Confidence 5788889999999999999999999999999998 873 23565544555555 8999999 999999999
Q ss_pred Cc
Q psy5613 164 YF 165 (1010)
Q Consensus 164 ~~ 165 (1010)
|+
T Consensus 118 y~ 119 (142)
T 2c4f_L 118 YS 119 (142)
T ss_dssp EE
T ss_pred ce
Confidence 99
No 46
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.88 E-value=3.5e-08 Score=121.36 Aligned_cols=168 Identities=22% Similarity=0.461 Sum_probs=108.1
Q ss_pred CCCCCCeeeecCCceee----eCCCCCccCCCCCcccCCCCCCCCCCCCCC--CCCCCCcceecCCCeeee----cCCCC
Q psy5613 95 TCGEGAICDVVNHAVMC----TCPPGTTGSPFIQCKPIQNEPVYTNPCQPS--PCGPNSQCREINHQAVCS----CLPNY 164 (1010)
Q Consensus 95 ~C~~~~~C~~~~g~~~C----~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~--~C~~~g~C~~~~g~~~C~----C~~G~ 164 (1010)
.|.++ +|++. +++| .|..|..... |. ..+|... .|.+ +.|++. ++.|. |..|.
T Consensus 182 ~C~~g-~Ci~~--~~~CDg~~dC~dgsDE~~---C~--------~~~C~~~~f~C~~-g~Ci~~--~~~Cdg~~dC~dgs 244 (699)
T 1n7d_A 182 HCLSG-ECIHS--SWRCDGGPDCKDKSDEEN---CA--------VATCRPDEFQCSD-GNCIHG--SRQCDREYDCKDMS 244 (699)
T ss_dssp CCSSS-CCCST--TCTTSSSCCSTTSCSSCS---CC--------CCCCCSSEEESSS-SCEEET--TCCSSSCCCSSSSC
T ss_pred ecCCC-ceEec--hhccCCCCCCCCCccccc---CC--------CcccCCCcEecCC-Cceeee--ecccCCCCCCCCCC
Confidence 46543 67665 4567 5777765554 53 2456543 5764 789874 67886 77776
Q ss_pred cCCCCCCCCCCccCCCCC--CCCcccCCcccCCCCCCCCCCceEeecC--CCccccCCCCCccCCCccccCCCCCCCCCC
Q psy5613 165 FGSPPGCRPECTVNSDCP--LDRACQNQKCVDPCPGSCGYRARCQVYN--HNPVCSCPPGYTGNPFSQCLLPPTPTPTQA 240 (1010)
Q Consensus 165 ~g~~~~C~~~C~~~~~C~--~~~~C~~~~C~~~C~~~C~~~~~C~~~~--g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~ 240 (1010)
-.. .|.....|. ....|.+ +.|++.. -.+.+.|+.|+.+... .|
T Consensus 245 de~------~C~~~~~C~~~~~~~C~~--------------g~Ci~~~~~Cd~~~dC~dgsDe~~~-~C----------- 292 (699)
T 1n7d_A 245 DEV------GCVNVTLCEGPNKFKCHS--------------GECITLDKVCNMARDCRDWSDEPIK-EC----------- 292 (699)
T ss_dssp SSS------STTCCCCCCSTTCCCCTT--------------SCCCCSSCCSCSSCCSSSSCSCCCS-SC-----------
T ss_pred ccC------CCCCCCcccCCCceecCC--------------CcEeCCcccccccceecCccccccc-cc-----------
Confidence 554 444333332 1123333 3444322 1356788888876543 12
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeeCCCCc---cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccC
Q psy5613 241 TPTDPCFPSPCGSNARCRVQNEHALCECLPDYY---GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSV 317 (1010)
Q Consensus 241 ~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~---G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~ 317 (1010)
+++||...+-...++|+++.++|+|.|++||+ |..|+ +++||.. ++.|. ++|+|
T Consensus 293 -~~~eC~~~~~~C~~~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~-------------------~~~C~--~~C~n 349 (699)
T 1n7d_A 293 -GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD-------------------PDTCS--QLCVN 349 (699)
T ss_dssp -CCCCTTSSTTTSCTTCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSS-------------------SSSCT--TTCCB
T ss_pred -ccccccccccCcCCCcccCCCCcEEeCCCCeEcCCCCccc-CccccCC-------------------CCccc--ccccc
Confidence 68888854422247899999999999999999 55665 5677653 23564 48899
Q ss_pred CCCCceecCCCCcccCC
Q psy5613 318 SNHIPICYCPAGFTGDA 334 (1010)
Q Consensus 318 ~~g~~~C~C~~Gy~G~~ 334 (1010)
+.|+|+|.|++||++..
T Consensus 350 ~~g~y~C~C~~G~~~~~ 366 (699)
T 1n7d_A 350 LEGGYKCQCEEGFQLDP 366 (699)
T ss_dssp CSSCBCCCCCSSCBCCS
T ss_pred CCCCeeeeeecccccCC
Confidence 99999999999999764
No 47
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.86 E-value=6.8e-10 Score=97.75 Aligned_cols=69 Identities=22% Similarity=0.513 Sum_probs=54.9
Q ss_pred cCCCCCCC--CCCCCeeeecCCceeeeCCCCCccCCC-CCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCC
Q psy5613 88 KNPCVPGT--CGEGAICDVVNHAVMCTCPPGTTGSPF-IQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNY 164 (1010)
Q Consensus 88 ~~~C~~~~--C~~~~~C~~~~g~~~C~C~~G~~g~~~-~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~ 164 (1010)
+|||..++ | ++++|+++.++|+|.|++||++... ..|+ ++|+|..+||. ++|++++++|+|.|+ ||
T Consensus 3 ideC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-------dideC~~~~C~--~~C~n~~g~y~C~C~-g~ 71 (87)
T 1z6c_A 3 VDECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-------DIDECSENMCA--QLCVNYPGGYTCYCD-GK 71 (87)
T ss_dssp SCSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-------CCCHHHHSCCS--SEECCCSSSCCEECC-SS
T ss_pred cccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCC-------CcCeeCCCCCC--CEEEccCCCEEEECC-CC
Confidence 46666555 8 7899999999999999999994321 1286 45899888997 699999999999997 55
Q ss_pred cCC
Q psy5613 165 FGS 167 (1010)
Q Consensus 165 ~g~ 167 (1010)
.|.
T Consensus 72 ~G~ 74 (87)
T 1z6c_A 72 KGF 74 (87)
T ss_dssp SCC
T ss_pred cCC
Confidence 554
No 48
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.83 E-value=7.2e-10 Score=112.08 Aligned_cols=67 Identities=28% Similarity=0.669 Sum_probs=24.6
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCC-CCCCC--CCCCCCCcceecCCCeeeecCCCC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYT-NPCQP--SPCGPNSQCREINHQAVCSCLPNY 164 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~-d~C~~--~~C~~~g~C~~~~g~~~C~C~~G~ 164 (1010)
+|+|.++||.++|+|+++.|+|+|.|++||+|.. |++ ++ ++|.. .+|.+ +|+++.++|+|.|++||
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~---Ce~------~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy 110 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CEL------FTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGY 110 (195)
T ss_dssp ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTE
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceecc---ccc------cccccccCCCCCCCC--EeECCCCCeEEECCCCc
Confidence 5788889999999999999999999999999998 973 35 77875 46875 99999999999999999
Q ss_pred c
Q psy5613 165 F 165 (1010)
Q Consensus 165 ~ 165 (1010)
+
T Consensus 111 ~ 111 (195)
T 1nfu_B 111 T 111 (195)
T ss_dssp E
T ss_pred e
Confidence 9
No 49
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=98.78 E-value=9.9e-10 Score=105.19 Aligned_cols=67 Identities=28% Similarity=0.669 Sum_probs=24.3
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCC-CCCCC--CCCCCCCcceecCCCeeeecCCCC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYT-NPCQP--SPCGPNSQCREINHQAVCSCLPNY 164 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~-d~C~~--~~C~~~g~C~~~~g~~~C~C~~G~ 164 (1010)
+|+|.++||.++|+|+++.++|+|.|++||+|.. |++ ++ |+|.. .+|.+ +|+++.++|+|.|++||
T Consensus 42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~---C~~------~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy 110 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKN---CEL------FTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGY 110 (134)
T ss_dssp ------------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTE
T ss_pred cCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCc---ccc------CCCCccccCCCCCCC--EeECCCCCEEEECCCCc
Confidence 5788889999999999999999999999999987 873 34 77865 45765 99999999999999999
Q ss_pred c
Q psy5613 165 F 165 (1010)
Q Consensus 165 ~ 165 (1010)
+
T Consensus 111 ~ 111 (134)
T 2vh0_B 111 T 111 (134)
T ss_dssp E
T ss_pred E
Confidence 9
No 50
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.77 E-value=1.2e-09 Score=99.82 Aligned_cols=79 Identities=24% Similarity=0.423 Sum_probs=35.7
Q ss_pred CCCCCccCCCccccCCCCCCCCCCCCCCCCCCC--CCCCCCeecccCCceeeeeCCCCcc---CCCCcCCCCCccCCCCC
Q psy5613 217 CPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPS--PCGSNARCRVQNEHALCECLPDYYG---NPYEGCRPECLINSDCP 291 (1010)
Q Consensus 217 C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~--~C~~~~~C~~~~g~~~C~C~~Gf~G---~~c~~~~~eC~~~~~C~ 291 (1010)
-..||+++.| ++|||+.. +|. ++|+++.++|+|.|++||+| ..|+ +|+||..
T Consensus 18 ~~~~~~~~~C---------------d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~----- 74 (107)
T 2w2n_E 18 TENLYFQGAM---------------GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD----- 74 (107)
T ss_dssp --CCCCSCCB---------------SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEE-C-----------
T ss_pred cCCCcCCCCC---------------cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccc-cccccCC-----
Confidence 3467888774 68899853 564 69999999999999999998 5666 6677652
Q ss_pred CccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCC
Q psy5613 292 LSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDA 334 (1010)
Q Consensus 292 ~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~ 334 (1010)
+++|. ++|+++.++|+|.|++||++..
T Consensus 75 --------------~~~C~--~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 75 --------------PDTCS--QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp -------------------------------------------
T ss_pred --------------CCCcC--CeeecCCCCEEEECCCCceECC
Confidence 23564 6899999999999999999865
No 51
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.77 E-value=1.6e-09 Score=99.08 Aligned_cols=82 Identities=30% Similarity=0.617 Sum_probs=33.6
Q ss_pred eCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCCcccCCCCCCCCCC
Q psy5613 268 CLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDAFRQCSPIPQREPE 347 (1010)
Q Consensus 268 C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~c~~C~~i~~~~~~ 347 (1010)
...||+|+.| ++++|..+ .+.|. ++|+++.++|+|.|++||+|..=..| +
T Consensus 18 ~~~~~~~~~C--d~neC~~~------------------~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C--------~ 67 (107)
T 2w2n_E 18 TENLYFQGAM--GTNECLDN------------------NGGCS--YVCNDLKIGYECLCPDGFQLVAQRRC--------E 67 (107)
T ss_dssp --CCCCSCCB--SCCGGGTG------------------GGGCS--SEEECCSBSCEEECCTTCEEETTTEE--------E
T ss_pred cCCCcCCCCC--cCccCcCC------------------CCCCC--CEeEeCCCCeEEECCCCccccCCCcc--------c
Confidence 3467888877 35666542 23554 58999999999999999998311123 3
Q ss_pred CCCCCCC-CCCCCCCeEeecCCceeeeecCccccc
Q psy5613 348 YRDPCST-TQCGLNAICTVINGAAQCACLLLLQHH 381 (1010)
Q Consensus 348 ~~deC~~-~~C~~~~~C~n~~g~~~C~C~~G~~g~ 381 (1010)
+||||+. ++|. ++|+|+.|+|+|.|++||+++
T Consensus 68 dideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 68 DIDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp C----------------------------------
T ss_pred cccccCCCCCcC--CeeecCCCCEEEECCCCceEC
Confidence 6799984 7886 799999999999999999874
No 52
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.71 E-value=9.1e-09 Score=101.74 Aligned_cols=117 Identities=29% Similarity=0.726 Sum_probs=76.7
Q ss_pred CCCCCCeeeeeC--Cccee-eCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccCceeecCCCccCCCCcccC
Q psy5613 693 SCGQGAQCRVIN--HSPVC-YCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRDNVCVCLPDYYGDGYTVCR 769 (1010)
Q Consensus 693 ~C~~~~~C~~~~--g~~~C-~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~~~C~C~~G~~G~~c~~~~ 769 (1010)
+|.++++|+... +.++| .|++||+|..|+ .|++||+|+.+....
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce---------------------------------~C~~g~~g~~~~~~~ 48 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE---------------------------------LCDDGYFGDPLGSNG 48 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSC---------------------------------EECTTEEEETTCTTS
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCc---------------------------------CCCCCCcCCcccccC
Confidence 477889998765 57899 799999999997 366777776533100
Q ss_pred CCCCCCCCCCCCcccccCCccCCCCCCCCCCC------CeeeecCCeeeee-CCCCCccCCCccccCCccCCCCCCCCC-
Q psy5613 770 PECVRNSDCANNKACIRNKCKNPCVPGTCGEG------AICDVINHSVVCS-CPPGTTGSPFIQCKPVIQEPVYTNPCQ- 841 (1010)
Q Consensus 770 ~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~------~~C~~~~g~y~C~-C~~G~~G~~~~~C~~~~~~~~~~~~C~- 841 (1010)
....|. +-.|.++ +.|+..+| +|+ |++||+|.. |++ +.++++.+.+.
T Consensus 49 ----------~~~~C~---------~C~C~~~~~~~~~~~C~~~tG--~C~~C~~g~~G~~---Ce~-C~~Gy~g~~~~~ 103 (162)
T 1klo_A 49 ----------PVRLCR---------PCQCNDNIDPNAVGNCNRLTG--ECLKCIYNTAGFY---CDR-CKEGFFGNPLAP 103 (162)
T ss_dssp ----------SCEEEE---------ECCSTTCBCTTCSCCBCTTTC--CBCCBCTTEETTT---TCE-ECTTEEECTTCS
T ss_pred ----------CCCCCe---------eCcCCCCCCcccCCcccCCCC--cccCCCCCCcCCC---cCc-CchhhcCCcccc
Confidence 000111 1123222 46766555 895 999999995 653 44455555443
Q ss_pred -------CCCCCCCC------ceeecCCceeeecCCCCcCC
Q psy5613 842 -------PSPCGPNS------QCREVNKQAVCSCLPNYFGS 869 (1010)
Q Consensus 842 -------~~~C~~~~------~C~~~~g~~~C~C~~G~~g~ 869 (1010)
.-+|.+.+ +|....| +|+|++||+|.
T Consensus 104 ~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G~ 142 (162)
T 1klo_A 104 NPADKCKACACNPYGTVQQQSSCNPVTG--QCQCLPHVSGR 142 (162)
T ss_dssp SGGGSEEECCCCTTTBGGGCCCCCTTTC--CCCBCTTEEST
T ss_pred CCCCCCeeccCCCCCccCCCCCCCCCCC--EeECCCCCcCC
Confidence 34576654 7887666 89999999998
No 53
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.70 E-value=1.4e-08 Score=112.77 Aligned_cols=75 Identities=25% Similarity=0.572 Sum_probs=64.1
Q ss_pred CCCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCC
Q psy5613 241 TPTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNH 320 (1010)
Q Consensus 241 ~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 320 (1010)
.|+|+|.++||.++++|++..++|+|.|++||+|..|+.+++||.... .++|.+ .|+++.+
T Consensus 3 ~d~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~-----------------~~~C~~--~C~~~~g 63 (317)
T 3h5c_B 3 KGGSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPER-----------------TDGCQH--FCLPGQE 63 (317)
T ss_dssp ---CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTC-----------------TTSCSS--EEECCSS
T ss_pred ccCCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCC-----------------CCCCcC--ccccCCC
Confidence 578999999999999999999999999999999999998899887521 246765 8999999
Q ss_pred CceecCCCCcccCC
Q psy5613 321 IPICYCPAGFTGDA 334 (1010)
Q Consensus 321 ~~~C~C~~Gy~G~~ 334 (1010)
+|+|.|++||+|..
T Consensus 64 ~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 64 SYTCSCAQGYRLGE 77 (317)
T ss_dssp SCEEECCTTEECCT
T ss_pred eeEEeccccccccc
Confidence 99999999999864
No 54
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.69 E-value=1.3e-08 Score=113.02 Aligned_cols=69 Identities=30% Similarity=0.714 Sum_probs=62.3
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCC---CCCCCCCcceecCCCeeeecCCCC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQP---SPCGPNSQCREINHQAVCSCLPNY 164 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~---~~C~~~g~C~~~~g~~~C~C~~G~ 164 (1010)
+|+|.++||.++++|++..++|+|.|++||+|+. |+ .++|+|.. +||.+ +|+++.++|+|.|++||
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~---C~------~~~~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSN---CE------LAKNECHPERTDGCQH--FCLPGQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSS---SC------CCSSSCCTTCTTSCSS--EEECCSSSCEEECCTTE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCc---cc------cCcccCCCCCCCCCcC--ccccCCCeeEEeccccc
Confidence 4778889999999999999999999999999998 97 46799976 78987 99999999999999999
Q ss_pred cCC
Q psy5613 165 FGS 167 (1010)
Q Consensus 165 ~g~ 167 (1010)
+|.
T Consensus 74 ~~~ 76 (317)
T 3h5c_B 74 RLG 76 (317)
T ss_dssp ECC
T ss_pred ccc
Confidence 986
No 55
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.67 E-value=5.9e-08 Score=119.30 Aligned_cols=135 Identities=25% Similarity=0.484 Sum_probs=92.7
Q ss_pred CCCCCceEeecCCCcccc----CCCCCccCCCccccCCCCCCCCCCCCCCCCC---CCCCCCCCeecccCC--ceeeeeC
Q psy5613 199 SCGYRARCQVYNHNPVCS----CPPGYTGNPFSQCLLPPTPTPTQATPTDPCF---PSPCGSNARCRVQNE--HALCECL 269 (1010)
Q Consensus 199 ~C~~~~~C~~~~g~~~C~----C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~---~~~C~~~~~C~~~~g--~~~C~C~ 269 (1010)
.|. ++.|++ .++.|. |..|..+..| ..+++|. ...|.+ ++|++... .+.+.|+
T Consensus 221 ~C~-~g~Ci~--~~~~Cdg~~dC~dgsde~~C--------------~~~~~C~~~~~~~C~~-g~Ci~~~~~Cd~~~dC~ 282 (699)
T 1n7d_A 221 QCS-DGNCIH--GSRQCDREYDCKDMSDEVGC--------------VNVTLCEGPNKFKCHS-GECITLDKVCNMARDCR 282 (699)
T ss_dssp ESS-SSCEEE--TTCCSSSCCCSSSSCSSSST--------------TCCCCCCSTTCCCCTT-SCCCCSSCCSCSSCCSS
T ss_pred ecC-CCceee--eecccCCCCCCCCCCccCCC--------------CCCCcccCCCceecCC-CcEeCCcccccccceec
Confidence 354 467876 467786 8888877664 3355663 356765 78876542 3567788
Q ss_pred CCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCCcccCCCCCCCCCCCC
Q psy5613 270 PDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDAFRQCSPIPQREPEYR 349 (1010)
Q Consensus 270 ~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~c~~C~~i~~~~~~~~ 349 (1010)
.|+.+...+-+++||..+ .+.|. ++|+++.++|+|.|++||++..=..| +++
T Consensus 283 dgsDe~~~~C~~~eC~~~------------------~~~C~--~~C~~~~~~~~C~C~~G~~~~~~~~C--------~di 334 (699)
T 1n7d_A 283 DWSDEPIKECGTNECLDN------------------NGGCS--HVCNDLKIGYECLCPDGFQLVAQRRC--------EDI 334 (699)
T ss_dssp SSCSCCCSSCCCCCTTSS------------------TTTSC--TTCCCCTTCCCCCCCSSSCCCSSSCC--------CCC
T ss_pred Cccccccccccccccccc------------------ccCcC--CCcccCCCCcEEeCCCCeEcCCCCcc--------cCc
Confidence 877655433234444332 34564 48899999999999999995221123 467
Q ss_pred CCCC-CCCCCCCCeEeecCCceeeeecCccccc
Q psy5613 350 DPCS-TTQCGLNAICTVINGAAQCACLLLLQHH 381 (1010)
Q Consensus 350 deC~-~~~C~~~~~C~n~~g~~~C~C~~G~~g~ 381 (1010)
|||+ ..+|. ++|+|+.|+|+|.|++||++.
T Consensus 335 deC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 335 DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred cccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 9998 56785 589999999999999999874
No 56
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.61 E-value=1.4e-08 Score=104.75 Aligned_cols=103 Identities=20% Similarity=0.447 Sum_probs=75.8
Q ss_pred CCCCCCeecCcceecCCCCccCCCCcCCCCCccCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCceeeeCCCC---
Q psy5613 40 NCVPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNSDCPSNKACIRNKCKNPCVPGTCGEGAICDVVNHAVMCTCPPG--- 116 (1010)
Q Consensus 40 ~C~~~~~C~~~~C~C~~G~~g~~~~~~~~eC~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~~~C~C~~G--- 116 (1010)
.|++||+|+.++|+|++||+|..|+...++.. ..+.+..|.......+|.++|+|+. | +|.|++|
T Consensus 97 ~Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~--------~~~~~~~C~~~~~~~~Csg~G~C~~--g--~C~C~~gw~~ 164 (217)
T 2p28_B 97 LCHGKGFLECGICRCDTGYIGKNCECQTQGRS--------SQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVP 164 (217)
T ss_dssp TTTTSEEEETTEEEECTTEESTTSCEECCCCC---------GGGGGGGBSSTTSCBGGGTEEEET--T--EEEECCCCST
T ss_pred ccCCCceEECCEEECCCCccCCcccccCcccc--------cccCCCcCCCCCCCCCCCCCCEEeC--C--ceECCCCCCC
Confidence 58999999999999999999998752111100 0112223444444578999999984 3 8999999
Q ss_pred ---CccCCCCCcccCCCCCCCCCCCCCC---CCCCC--CcceecCCCeeeecCCCCcCC
Q psy5613 117 ---TTGSPFIQCKPIQNEPVYTNPCQPS---PCGPN--SQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 117 ---~~g~~~~~C~~~~~~~~~~d~C~~~---~C~~~--g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
|+|.. |+ .+++.|..+ +|.++ |+|+. .+|.|.+||+|.
T Consensus 165 ~~~~~G~~---Ce------~~~~~C~~~~g~~C~~~~~G~C~~----g~C~C~~G~~G~ 210 (217)
T 2p28_B 165 GKLIYGQY---CE------CDTINCERYNGQVCGGPGRGLCFC----GKCRCHPGFEGS 210 (217)
T ss_dssp TCCEESTT---SC------EESSCSCEETTEETTCTTTEEEET----TEEEECTTEEST
T ss_pred cccEECCC---cc------cCCccCCCCCCCCCCCCCCcEEeC----CeeECCCCCccC
Confidence 58887 87 334678654 79887 99995 399999999998
No 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.57 E-value=4e-08 Score=121.58 Aligned_cols=127 Identities=23% Similarity=0.423 Sum_probs=74.3
Q ss_pred cCCCCCccCCCccccCCCCCCCCCCCCCCCCC---CCCCCCCCeecccCC--ceeeeeCCCCccCCCCcCCCCCccCCCC
Q psy5613 216 SCPPGYTGNPFSQCLLPPTPTPTQATPTDPCF---PSPCGSNARCRVQNE--HALCECLPDYYGNPYEGCRPECLINSDC 290 (1010)
Q Consensus 216 ~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~---~~~C~~~~~C~~~~g--~~~C~C~~Gf~G~~c~~~~~eC~~~~~C 290 (1010)
.|..|+.+..| ..+++|. ..+|.+ +.|++... .+.+.|+.|+.....+-.+++|..+
T Consensus 257 dC~dgsDE~~C--------------~~~~~C~~~~~~~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~~C~~~~C~~~--- 318 (791)
T 3m0c_C 257 DCKDMSDEVGC--------------VNVTLCEGPNKFKCHS-GECITLDKVCNMARDCRDWSDEPIKECGTNECLDN--- 318 (791)
T ss_dssp ------------------------------CCSTTCCCCTT-SCCCCSSCCSCSSCCSSSSCSCCCTTBSCCSTTTG---
T ss_pred ccccccccCcc--------------cccccccCCCccccCC-CcccccccccCCccccccccCcccccccccccccc---
Confidence 47777766664 2345553 356765 68887653 3456788887654321112233211
Q ss_pred CCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcc---cCCcccCCCCCCCCCCCCCCCC-CCCCCCCCeEeec
Q psy5613 291 PLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFT---GDAFRQCSPIPQREPEYRDPCS-TTQCGLNAICTVI 366 (1010)
Q Consensus 291 ~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~---G~~c~~C~~i~~~~~~~~deC~-~~~C~~~~~C~n~ 366 (1010)
++.|. +.|+++.++|+|.|++||. |..| +++|||+ ..+|. ++|+|+
T Consensus 319 ---------------~~~C~--~~C~~~~~~y~C~C~~Gy~l~~g~~C-----------~dideC~~~~~C~--~~C~n~ 368 (791)
T 3m0c_C 319 ---------------NGGCS--HVCNDLKIGYECLCPDGFQLVAQRRC-----------EDIDECQDPDTCS--QLCVNL 368 (791)
T ss_dssp ---------------GGGCS--SEEEECSBSEEEECCTTCEEETTTEE-----------ECCCCCSSSSSCT--TTCCBC
T ss_pred ---------------ccCcc--ccccCCCCCcccCCCCCCccCCCCcc-----------ccCcccCCCCCCC--CeeecC
Confidence 23454 4899999999999999997 4443 3679997 34564 589999
Q ss_pred CCceeeeecCcccc--ccccccCCcc
Q psy5613 367 NGAAQCACLLLLQH--HIHKNQDMDQ 390 (1010)
Q Consensus 367 ~g~~~C~C~~G~~g--~~~~~~~~~~ 390 (1010)
.|+|+|.|++||.+ +...|..+++
T Consensus 369 ~gsy~C~C~~Gy~l~~~~~~C~~~~~ 394 (791)
T 3m0c_C 369 EGGYKCQCEEGFQLDPHTKACKAVGS 394 (791)
T ss_dssp SSCBCCCCCSSEECCSSCCCCEETTS
T ss_pred CCCceeecCCCCEeCCCCceeeeccc
Confidence 99999999999987 3445555443
No 58
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.54 E-value=4.9e-08 Score=96.50 Aligned_cols=119 Identities=22% Similarity=0.574 Sum_probs=74.9
Q ss_pred CCCCCCccccCC--CCcee-eCCCCcccCCCCCccCCcCCC---CCCC---CccccCCccCCCCCCCCCCC------Cee
Q psy5613 636 PCGPYSQCRDIN--GSPSC-SCLPNYIGAPPNCRPECVQNT---ECPY---DKACINEKCRDPCPGSCGQG------AQC 700 (1010)
Q Consensus 636 ~C~~~g~C~~~~--g~y~C-~C~~G~~g~~~~C~~~C~~~~---~C~~---~~~C~~~~C~~~C~~~C~~~------~~C 700 (1010)
||.++++|+... +.++| .|++||+|. +|+. |.+.. .+.. ...|. +| .|.++ ++|
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~--~Ce~-C~~g~~g~~~~~~~~~~~C~------~C--~C~~~~~~~~~~~C 70 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGK--RCEL-CDDGYFGDPLGSNGPVRLCR------PC--QCNDNIDPNAVGNC 70 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEEST--TSCE-ECTTEEEETTCTTSSCEEEE------EC--CSTTCBCTTCSCCB
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCC--CCcC-CCCCCcCCcccccCCCCCCe------eC--cCCCCCCcccCCcc
Confidence 688999997655 67899 799999999 8983 55542 1110 00111 11 34333 456
Q ss_pred eeeCCcceee-CCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccCceeecCCCccCCCCcc-cCCCCCCCCCC
Q psy5613 701 RVINHSPVCY-CPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRDNVCVCLPDYYGDGYTV-CRPECVRNSDC 778 (1010)
Q Consensus 701 ~~~~g~~~C~-C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~~~C~C~~G~~G~~c~~-~~~~C~~~~~C 778 (1010)
....| +|+ |+++|+|..|+ .|++||+|+.+.. ....|.
T Consensus 71 ~~~tG--~C~~C~~g~~G~~Ce---------------------------------~C~~Gy~g~~~~~~~~~~C~----- 110 (162)
T 1klo_A 71 NRLTG--ECLKCIYNTAGFYCD---------------------------------RCKEGFFGNPLAPNPADKCK----- 110 (162)
T ss_dssp CTTTC--CBCCBCTTEETTTTC---------------------------------EECTTEEECTTCSSGGGSEE-----
T ss_pred cCCCC--cccCCCCCCcCCCcC---------------------------------cCchhhcCCccccCCCCCCe-----
Confidence 54444 784 88888888876 4677888876541 111121
Q ss_pred CCCcccccCCccCCCCCCCCCCC------CeeeecCCeeeeeCCCCCccCC
Q psy5613 779 ANNKACIRNKCKNPCVPGTCGEG------AICDVINHSVVCSCPPGTTGSP 823 (1010)
Q Consensus 779 ~~~~~C~~~~C~~~C~~~~C~~~------~~C~~~~g~y~C~C~~G~~G~~ 823 (1010)
+-.|.+. ++|+..+| +|.|++||+|..
T Consensus 111 ----------------~C~C~~~Gs~~~~~~Cd~~tG--~C~C~~g~~G~~ 143 (162)
T 1klo_A 111 ----------------ACACNPYGTVQQQSSCNPVTG--QCQCLPHVSGRD 143 (162)
T ss_dssp ----------------ECCCCTTTBGGGCCCCCTTTC--CCCBCTTEESTT
T ss_pred ----------------eccCCCCCccCCCCCCCCCCC--EeECCCCCcCCC
Confidence 1234333 37877666 999999999995
No 59
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.46 E-value=1.9e-07 Score=115.42 Aligned_cols=100 Identities=23% Similarity=0.433 Sum_probs=68.7
Q ss_pred CCCCCceEeecCC--CccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCCCCCeecccCCceeeeeCCCCc---
Q psy5613 199 SCGYRARCQVYNH--NPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCGSNARCRVQNEHALCECLPDYY--- 273 (1010)
Q Consensus 199 ~C~~~~~C~~~~g--~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~--- 273 (1010)
.|.+ +.|++... .+.+.|+.|+.+... +| ++++|...+....++|+++.++|+|.|++||.
T Consensus 280 ~C~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~-~C------------~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~ 345 (791)
T 3m0c_C 280 KCHS-GECITLDKVCNMARDCRDWSDEPIK-EC------------GTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVA 345 (791)
T ss_dssp CCTT-SCCCCSSCCSCSSCCSSSSCSCCCT-TB------------SCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEET
T ss_pred ccCC-CcccccccccCCccccccccCcccc-cc------------ccccccccccCccccccCCCCCcccCCCCCCccCC
Confidence 3443 45655332 345678888765542 12 45667654333346999999999999999996
Q ss_pred cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecCCCCcccCC
Q psy5613 274 GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYCPAGFTGDA 334 (1010)
Q Consensus 274 G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C~~Gy~G~~ 334 (1010)
|..|+ +++||.. ++.|. ++|+|+.|+|+|.|++||++..
T Consensus 346 g~~C~-dideC~~-------------------~~~C~--~~C~n~~gsy~C~C~~Gy~l~~ 384 (791)
T 3m0c_C 346 QRRCE-DIDECQD-------------------PDTCS--QLCVNLEGGYKCQCEEGFQLDP 384 (791)
T ss_dssp TTEEE-CCCCCSS-------------------SSSCT--TTCCBCSSCBCCCCCSSEECCS
T ss_pred CCccc-cCcccCC-------------------CCCCC--CeeecCCCCceeecCCCCEeCC
Confidence 55565 5677652 33564 4899999999999999998754
No 60
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.45 E-value=1.1e-07 Score=98.05 Aligned_cols=103 Identities=21% Similarity=0.468 Sum_probs=74.9
Q ss_pred CCCCCCcccCceeecCCCccCCCCcccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCeeeeeCCCC---
Q psy5613 742 ICAPNAVCRDNVCVCLPDYYGDGYTVCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPG--- 818 (1010)
Q Consensus 742 ~C~~~g~C~~~~C~C~~G~~G~~c~~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~y~C~C~~G--- 818 (1010)
.|.++|+|+.++|+|.+||+|..|+........ . +....|.......+|.++|+|+. + +|.|++|
T Consensus 97 ~Csg~G~C~~g~C~C~~G~~G~~Cec~~~~~~~--~------~~~~~C~~~~~~~~Csg~G~C~~--g--~C~C~~gw~~ 164 (217)
T 2p28_B 97 LCHGKGFLECGICRCDTGYIGKNCECQTQGRSS--Q------ELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVP 164 (217)
T ss_dssp TTTTSEEEETTEEEECTTEESTTSCEECCCCC---G------GGGGGGBSSTTSCBGGGTEEEET--T--EEEECCCCST
T ss_pred ccCCCceEECCEEECCCCccCCcccccCccccc--c------cCCCcCCCCCCCCCCCCCCEEeC--C--ceECCCCCCC
Confidence 488999999999999999999999854332110 0 01112332223568999999984 3 8999999
Q ss_pred ---CccCCCccccCCccCCCCCCCCCCC---CCCCC--CceeecCCceeeecCCCCcCC
Q psy5613 819 ---TTGSPFIQCKPVIQEPVYTNPCQPS---PCGPN--SQCREVNKQAVCSCLPNYFGS 869 (1010)
Q Consensus 819 ---~~G~~~~~C~~~~~~~~~~~~C~~~---~C~~~--~~C~~~~g~~~C~C~~G~~g~ 869 (1010)
|+|.. |+.+ .+.|... +|.++ |+|+. + +|.|.+||+|.
T Consensus 165 ~~~~~G~~---Ce~~------~~~C~~~~g~~C~~~~~G~C~~--g--~C~C~~G~~G~ 210 (217)
T 2p28_B 165 GKLIYGQY---CECD------TINCERYNGQVCGGPGRGLCFC--G--KCRCHPGFEGS 210 (217)
T ss_dssp TCCEESTT---SCEE------SSCSCEETTEETTCTTTEEEET--T--EEEECTTEEST
T ss_pred cccEECCC---cccC------CccCCCCCCCCCCCCCCcEEeC--C--eeECCCCCccC
Confidence 58884 8743 3667654 79887 99995 3 89999999999
No 61
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.36 E-value=3.4e-07 Score=66.94 Aligned_cols=37 Identities=24% Similarity=0.521 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCC
Q psy5613 242 PTDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYE 278 (1010)
Q Consensus 242 ~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~ 278 (1010)
++|+|.++||.++++|++..++|+|.|++||+|..|+
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 6899999999999999999999999999999999875
No 62
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.34 E-value=1.9e-07 Score=73.27 Aligned_cols=42 Identities=14% Similarity=0.337 Sum_probs=36.2
Q ss_pred CCCCCCCCCCCCCCCCee-----cccCCceeeeeCCCCccCCCCcCC
Q psy5613 240 ATPTDPCFPSPCGSNARC-----RVQNEHALCECLPDYYGNPYEGCR 281 (1010)
Q Consensus 240 ~~~~d~C~~~~C~~~~~C-----~~~~g~~~C~C~~Gf~G~~c~~~~ 281 (1010)
.+++|||+++||+|+|+| ++..++|+|.|++||+|..|+..+
T Consensus 5 ~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v 51 (55)
T 3u7u_G 5 LVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYV 51 (55)
T ss_dssp EEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEEC
T ss_pred cccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccC
Confidence 578999999999999999 566789999999999999988644
No 63
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.24 E-value=4.1e-07 Score=71.34 Aligned_cols=41 Identities=17% Similarity=0.412 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCCCCCcc-----eecCCCeeeecCCCCcCCCCCCCCCCccCC
Q psy5613 133 VYTNPCQPSPCGPNSQC-----REINHQAVCSCLPNYFGSPPGCRPECTVNS 179 (1010)
Q Consensus 133 ~~~d~C~~~~C~~~g~C-----~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~ 179 (1010)
+++|||+++||.|+|+| ++..++|+|.|++||+|. +|+..+
T Consensus 6 ~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~------~CE~~v 51 (55)
T 3u7u_G 6 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGD------RCQNYV 51 (55)
T ss_dssp EECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEEST------TSCEEC
T ss_pred ccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCC------CcCccC
Confidence 67899999999999999 466789999999999999 787653
No 64
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.21 E-value=1e-06 Score=64.38 Aligned_cols=34 Identities=21% Similarity=0.558 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCCCcceecCCCeeeecCCCCcCC
Q psy5613 134 YTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 134 ~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
++|+|..+||.++|+|+++.++|+|.|++||+|.
T Consensus 2 d~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~ 35 (39)
T 1edm_B 2 DGDQCESNPCLNGGSCKDDINSYECWCPFGFEGK 35 (39)
T ss_dssp CCCTTTTCCCCTTCEEEEETTEEEEECCTTCCST
T ss_pred ccccCCCCCCCCCCEeEcCCCceEeECCCCCcCC
Confidence 5799999999999999999999999999999998
No 65
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.20 E-value=1.2e-06 Score=100.43 Aligned_cols=70 Identities=23% Similarity=0.602 Sum_probs=57.1
Q ss_pred CCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCC-CCCCCCCCcceecCCCeeeecCCCCcCC
Q psy5613 89 NPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQ-PSPCGPNSQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 89 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~-~~~C~~~g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
|||..+++..+++|+++.++|+|.|++||++.....|++ +|||. ..+|.+ .|+++.|+|+|.|.+||++.
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~d-------ideC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCED-------IDECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEE-------CCCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccC-------chhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 466666666678999999999999999999532223974 58886 468875 89999999999999999987
No 66
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.09 E-value=1.7e-06 Score=99.15 Aligned_cols=69 Identities=25% Similarity=0.466 Sum_probs=57.6
Q ss_pred CCCCCCCCCCCCeecccCCceeeeeCCCCc---cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCC
Q psy5613 244 DPCFPSPCGSNARCRVQNEHALCECLPDYY---GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNH 320 (1010)
Q Consensus 244 d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~---G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g 320 (1010)
|||+..++..+++|++++++|+|.|++||+ |..|+ +++||.. +++|.. .|+|+.|
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~-------------------~~~C~~--~C~n~~g 58 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQD-------------------PDTCSQ--LCVNLEG 58 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCST-------------------TSSCSS--CCBCCSS
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-Cchhhhc-------------------cCCCCC--ccCCCcc
Confidence 578888888889999999999999999998 66675 6777753 345653 8999999
Q ss_pred CceecCCCCcccCC
Q psy5613 321 IPICYCPAGFTGDA 334 (1010)
Q Consensus 321 ~~~C~C~~Gy~G~~ 334 (1010)
+|+|.|++||++..
T Consensus 59 ~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 59 GYKCQCEEGFQLDP 72 (400)
T ss_dssp SCBCCCCTTCCCCT
T ss_pred ceeeeccccccccc
Confidence 99999999999764
No 67
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.02 E-value=9.3e-07 Score=100.79 Aligned_cols=69 Identities=25% Similarity=0.549 Sum_probs=14.8
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeeCCCCc----cCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccC
Q psy5613 242 PTDPCFPSPCGSNARCRVQNEHALCECLPDYY----GNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSV 317 (1010)
Q Consensus 242 ~~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~----G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~ 317 (1010)
++|||..+++...++|++..++|+|.|++||+ |..| .+++||.. .++|.+ .|++
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~-------------------~~~C~~--~C~~ 59 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAE-------------------EGYCSQ--GCTN 59 (386)
T ss_dssp ----------------------------------------------------------------------CCTT--EEC-
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeCC-------------------cCcccC--cCCC
Confidence 68999988866667999999999999999998 7777 46777752 346654 4999
Q ss_pred CCCCceecCCCCccc
Q psy5613 318 SNHIPICYCPAGFTG 332 (1010)
Q Consensus 318 ~~g~~~C~C~~Gy~G 332 (1010)
+.|+|+|.|++||+.
T Consensus 60 ~~g~~~C~C~~g~~l 74 (386)
T 3v65_B 60 SEGAFQCWCEAGYEL 74 (386)
T ss_dssp ----CCEECCTTEEE
T ss_pred CCCCCeEEECCCceE
Confidence 999999999999983
No 68
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.98 E-value=4.5e-06 Score=65.39 Aligned_cols=40 Identities=20% Similarity=0.409 Sum_probs=35.7
Q ss_pred CCCCCCCC---CCCCCCeec--ccCCceeeeeCCCCccCCCCcCC
Q psy5613 242 PTDPCFPS---PCGSNARCR--VQNEHALCECLPDYYGNPYEGCR 281 (1010)
Q Consensus 242 ~~d~C~~~---~C~~~~~C~--~~~g~~~C~C~~Gf~G~~c~~~~ 281 (1010)
+|++|.+. ||.++|+|+ +..++|+|.|++||+|..|+..+
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 57899876 999999999 78899999999999999988654
No 69
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.92 E-value=1.9e-06 Score=98.29 Aligned_cols=83 Identities=22% Similarity=0.532 Sum_probs=20.0
Q ss_pred CCCCCCCCCCCCCCceeecCCceeeecCCCCcCCCCCCCCCCccCCCCCCcccccCCcccCCCCCCCCCCCeeeecCCCc
Q psy5613 836 YTNPCQPSPCGPNSQCREVNKQAVCSCLPNYFGSPPNCRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVINHSP 915 (1010)
Q Consensus 836 ~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~ 915 (1010)
++|+|..+++...+.|.+..|+|+|.|++||++.. +...|.+.++|.. +++|.+. |.++.|+|
T Consensus 2 ~~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~--------~~~~C~d~~eC~~-------~~~C~~~--C~~~~g~~ 64 (386)
T 3v65_B 2 GEENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTE--------DGRTCQDVNECAE-------EGYCSQG--CTNSEGAF 64 (386)
T ss_dssp -----------------------------------------------------------------CCTTE--EC-----C
T ss_pred CcCcccCCCCCCCCCCcCCCCCcEeECCCCceECC--------CCCccCccceeCC-------cCcccCc--CCCCCCCC
Confidence 56999887755556899999999999999999431 1122333445542 3467653 99999999
Q ss_pred eeeCCCCCcCCC-CCCcccCC
Q psy5613 916 ICTCRPGFTGEP-RIRCSPIP 935 (1010)
Q Consensus 916 ~C~C~~G~~G~~-~~~C~~~~ 935 (1010)
+|.|++||+... ...|..+.
T Consensus 65 ~C~C~~g~~l~~d~~~C~~~~ 85 (386)
T 3v65_B 65 QCWCEAGYELRPDRRSCKALG 85 (386)
T ss_dssp CEECCTTEEECTTSSCEEECS
T ss_pred eEEECCCceEcCCCCeECCcc
Confidence 999999998432 13687544
No 70
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.92 E-value=6.3e-06 Score=62.19 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=32.5
Q ss_pred CCCCC---CCCCCCeec--ccCCceeeeeCCCCccCCCCcCCC
Q psy5613 245 PCFPS---PCGSNARCR--VQNEHALCECLPDYYGNPYEGCRP 282 (1010)
Q Consensus 245 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~Gf~G~~c~~~~~ 282 (1010)
+|.++ ||.++|+|+ +..++|+|.|++||+|..|+.+++
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~ 44 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRDL 44 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEECC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcccC
Confidence 56666 999999998 678999999999999999886543
No 71
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.81 E-value=3.6e-06 Score=67.51 Aligned_cols=40 Identities=25% Similarity=0.663 Sum_probs=36.7
Q ss_pred CCCCCCCCCCCCCCC--CeecccCCceeeeeCCCCc-cCCCCc
Q psy5613 240 ATPTDPCFPSPCGSN--ARCRVQNEHALCECLPDYY-GNPYEG 279 (1010)
Q Consensus 240 ~~~~d~C~~~~C~~~--~~C~~~~g~~~C~C~~Gf~-G~~c~~ 279 (1010)
+.++|+|+++||.++ |+|+++.++|+|.|++||+ |..|+.
T Consensus 8 ~~~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 8 SETPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp TTSCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred cCCCCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 468999999999999 8999999999999999999 998763
No 72
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.78 E-value=1.3e-05 Score=60.34 Aligned_cols=34 Identities=21% Similarity=0.478 Sum_probs=29.5
Q ss_pred CCCCC---CCCCCCeee--ecCCceeeeCCCCCccCCCCCcc
Q psy5613 90 PCVPG---TCGEGAICD--VVNHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 90 ~C~~~---~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
+|.++ ||.++|+|+ +..++|+|.|++||+|+. |+
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~---Ce 40 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDR---CQ 40 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTT---TC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCc---CC
Confidence 45555 999999998 677899999999999998 87
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.75 E-value=2.7e-06 Score=68.27 Aligned_cols=39 Identities=33% Similarity=0.796 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCCC--CcceecCCCeeeecCCCCc-CCCCCCCCCCccC
Q psy5613 134 YTNPCQPSPCGPN--SQCREINHQAVCSCLPNYF-GSPPGCRPECTVN 178 (1010)
Q Consensus 134 ~~d~C~~~~C~~~--g~C~~~~g~~~C~C~~G~~-g~~~~C~~~C~~~ 178 (1010)
++|+|.++||.++ |+|+++.++|+|.|++||+ |. +|++.
T Consensus 10 ~~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~------~C~~~ 51 (61)
T 2k2s_B 10 TPAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISL------DGTGN 51 (61)
T ss_dssp SCCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEE------CSSSC
T ss_pred CCCcCcCCCCcCCCccccccCCCceEeECCCCCccCC------CCCCC
Confidence 5689999999998 8999999999999999999 98 66654
No 74
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.74 E-value=6.2e-06 Score=67.28 Aligned_cols=44 Identities=18% Similarity=0.366 Sum_probs=38.2
Q ss_pred CCCCCCCCCCCCCeecc-----cCCceeeeeCCCCccCCCCcCCCCCcc
Q psy5613 243 TDPCFPSPCGSNARCRV-----QNEHALCECLPDYYGNPYEGCRPECLI 286 (1010)
Q Consensus 243 ~d~C~~~~C~~~~~C~~-----~~g~~~C~C~~Gf~G~~c~~~~~eC~~ 286 (1010)
.++|.++||.++|+|++ ..++|+|.|++||+|..|+.+++++..
T Consensus 6 c~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 6 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp CCHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred cCCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 46788899999999997 568999999999999999987777654
No 75
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.74 E-value=1.9e-05 Score=61.84 Aligned_cols=39 Identities=26% Similarity=0.554 Sum_probs=34.2
Q ss_pred CCCCCCCC---CCCCCCcce--ecCCCeeeecCCCCcCCCCCCCCCCccC
Q psy5613 134 YTNPCQPS---PCGPNSQCR--EINHQAVCSCLPNYFGSPPGCRPECTVN 178 (1010)
Q Consensus 134 ~~d~C~~~---~C~~~g~C~--~~~g~~~C~C~~G~~g~~~~C~~~C~~~ 178 (1010)
++++|.++ ||.++|+|+ +..++|+|.|++||+|. +|+..
T Consensus 2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~------~Ce~~ 45 (53)
T 1egf_A 2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGD------RCQTR 45 (53)
T ss_dssp EECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSS------SSCCC
T ss_pred CcccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCC------cCCcc
Confidence 46889876 999999999 78899999999999998 77664
No 76
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.68 E-value=2e-05 Score=59.55 Aligned_cols=37 Identities=22% Similarity=0.450 Sum_probs=32.3
Q ss_pred CCCCCCC---CCCCCCCeecccC--CceeeeeCCCCccCCCCc
Q psy5613 242 PTDPCFP---SPCGSNARCRVQN--EHALCECLPDYYGNPYEG 279 (1010)
Q Consensus 242 ~~d~C~~---~~C~~~~~C~~~~--g~~~C~C~~Gf~G~~c~~ 279 (1010)
++++|.+ +||.+ |+|++.. ++|+|.|++||+|..|+.
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 5788987 99999 8999765 689999999999998874
No 77
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.68 E-value=1.1e-05 Score=65.75 Aligned_cols=43 Identities=23% Similarity=0.429 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCCeeee-----cCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCC
Q psy5613 89 NPCVPGTCGEGAICDV-----VNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQP 140 (1010)
Q Consensus 89 ~~C~~~~C~~~~~C~~-----~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~ 140 (1010)
|+|.++||.|+|+|++ ..++|+|.|++||+|.. |+ .+++++..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~---Ce------~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGAR---CT------ENVPMKVQ 54 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTT---SC------EECCSSCT
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCc---cC------cCcCcccc
Confidence 4566789999999997 56789999999999998 97 34566643
No 78
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.55 E-value=9.7e-06 Score=94.07 Aligned_cols=59 Identities=31% Similarity=0.832 Sum_probs=22.8
Q ss_pred CCCCCCeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCC
Q psy5613 95 TCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPE 174 (1010)
Q Consensus 95 ~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~ 174 (1010)
+|.+ ++|++. ++|.|++||+|.. |+ +++|.+ +|.++|+|++. ++|.|++||+|. .
T Consensus 398 ~C~n-G~C~~~---~~C~C~~G~~G~~---C~--------~~~C~~-~C~~~g~C~~~---~~C~C~~G~~G~------~ 452 (463)
T 2wg3_C 398 LCRN-GYCTPT---GKCCCSPGWEGDF---CR--------TAKCEP-ACRHGGVCVRP---NKCLCKKGYLGP------Q 452 (463)
T ss_dssp HCCS-EEECTT---SCEEECTTEESTT---SC--------EECC------------------------------------
T ss_pred CCCC-CccCCC---CeECCCCCcCCCc---CC--------cCcCCC-CCCCCCEECCC---CEEECCCCcccC------C
Confidence 4676 789864 3899999999998 85 367876 99999999975 799999999998 6
Q ss_pred CccC
Q psy5613 175 CTVN 178 (1010)
Q Consensus 175 C~~~ 178 (1010)
|+..
T Consensus 453 C~~~ 456 (463)
T 2wg3_C 453 CEQV 456 (463)
T ss_dssp ----
T ss_pred CCCC
Confidence 7654
No 79
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.54 E-value=3.4e-05 Score=58.20 Aligned_cols=38 Identities=26% Similarity=0.531 Sum_probs=32.1
Q ss_pred CCCCCCC---CCCCCCCcceecC--CCeeeecCCCCcCCCCCCCCCCccC
Q psy5613 134 YTNPCQP---SPCGPNSQCREIN--HQAVCSCLPNYFGSPPGCRPECTVN 178 (1010)
Q Consensus 134 ~~d~C~~---~~C~~~g~C~~~~--g~~~C~C~~G~~g~~~~C~~~C~~~ 178 (1010)
++++|.+ +||.+ |+|++.. ++|+|.|++||+|. +|+..
T Consensus 2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~C~~GytG~------~Ce~~ 44 (46)
T 1k36_A 2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCRCEVGYTGV------RCEHF 44 (46)
T ss_dssp CEECCCTTCCSSCSS-EEEEEETTTTEEEEEECTTCSST------TSCCC
T ss_pred ccccCCCCCCCCCCC-CEeeccCCCCCEEEECCCCCccC------CCCcc
Confidence 4688887 89999 8999865 68999999999998 77653
No 80
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.51 E-value=5e-05 Score=85.09 Aligned_cols=114 Identities=19% Similarity=0.376 Sum_probs=30.9
Q ss_pred CCCC-CeeeeeCCcceeeCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcc-----cCceee-cCCCccCCCCc
Q psy5613 694 CGQG-AQCRVINHSPVCYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVC-----RDNVCV-CLPDYYGDGYT 766 (1010)
Q Consensus 694 C~~~-~~C~~~~g~~~C~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C-----~~~~C~-C~~G~~G~~c~ 766 (1010)
|..+ ..|....++++|.|+.+|+|..|+.|.+.... .| +.++..+ ..+.|+ |.-++.|..|+
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~---------~P--~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD 367 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPDCGKCKKNYQG---------RP--WSPGSYLPIPKGAANACIPSISSIGTNVCD 367 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSSSCEECTTCCS---------SC--CCCCBCCSSSSCBCCCCCCCCC--------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCCcccccccccc---------Cc--ccCCcccccCCCCCCcccCCCCCCCcCccc
Confidence 4433 47888888899999999999999987664321 11 1111110 012232 22233344332
Q ss_pred ccCCCCCCCCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCeeeeeCCCCCccCCCccccCCccCCCCCCCCCCCCCC
Q psy5613 767 VCRPECVRNSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPGTTGSPFIQCKPVIQEPVYTNPCQPSPCG 846 (1010)
Q Consensus 767 ~~~~~C~~~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~C~~~~C~ 846 (1010)
.. .++|.++|+|.... +|+|++||+|.. |+ ..+|.
T Consensus 368 ~~--------------------------t~~C~ngg~C~~~~---~C~C~~G~~G~~---Ce-------------~c~C~ 402 (426)
T 3zyj_B 368 NE--------------------------LLHCQNGGTCHNNV---RCLCPAAYTGIL---CE-------------KLRCE 402 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cC--------------------------cccCCCCCCcCCCC---CCcCCCCCcCCC---Cc-------------CCCCC
Confidence 10 45788899997665 999999999984 65 34588
Q ss_pred CCCceeecCCceeeecCCC
Q psy5613 847 PNSQCREVNKQAVCSCLPN 865 (1010)
Q Consensus 847 ~~~~C~~~~g~~~C~C~~G 865 (1010)
++|+|....| +|.=+.|
T Consensus 403 ~~g~C~~~~G--qc~~~~~ 419 (426)
T 3zyj_B 403 EAGSCGSDSG--QGAPPHG 419 (426)
T ss_dssp -------------------
T ss_pred CCCcccCCCC--ccCCCCC
Confidence 8899998877 4554444
No 81
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.45 E-value=5.3e-05 Score=84.86 Aligned_cols=111 Identities=23% Similarity=0.464 Sum_probs=34.7
Q ss_pred CCCC-CeeeecCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCCcc-eecCCCeeee-cCCCCcCCCCCCC
Q psy5613 96 CGEG-AICDVVNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQC-REINHQAVCS-CLPNYFGSPPGCR 172 (1010)
Q Consensus 96 C~~~-~~C~~~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C-~~~~g~~~C~-C~~G~~g~~~~C~ 172 (1010)
|..+ +.|....|+++|.|++||+|.. |+. -.......|+.+++.+ +.....+.|. |+-++.|.
T Consensus 299 CnGHas~C~~~~g~~~C~C~~~ttG~~---CE~------C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~----- 364 (426)
T 3zyj_B 299 CNLHATVCVYDNSKLTCECEHNTTGPD---CGK------CKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTN----- 364 (426)
T ss_dssp CSSSCSCEEEETTEEEECCCTTEESSS---SCE------ECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC----------
T ss_pred CCCchhhcCCCCCCceeeCCCCCcCCC---ccc------cccccccCcccCCcccccCCCCCCcccCCCCCCCcC-----
Confidence 5444 5799888889999999999998 641 0122234566653221 2233355564 34344454
Q ss_pred CCCccCCCCCCCCcccCCcccCCCCCCCCCCceEeecCCCccccCCCCCccCCCccccCCCCCCCCCCCCCCCCCCCCCC
Q psy5613 173 PECTVNSDCPLDRACQNQKCVDPCPGSCGYRARCQVYNHNPVCSCPPGYTGNPFSQCLLPPTPTPTQATPTDPCFPSPCG 252 (1010)
Q Consensus 173 ~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~~~~~~~d~C~~~~C~ 252 (1010)
.|+.. .++|.++|+|++.. +|+|++||+|..|+. .+|.
T Consensus 365 -~CD~~------------------t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce~--------------------c~C~ 402 (426)
T 3zyj_B 365 -VCDNE------------------LLHCQNGGTCHNNV---RCLCPAAYTGILCEK--------------------LRCE 402 (426)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ccccC------------------cccCCCCCCcCCCC---CCcCCCCCcCCCCcC--------------------CCCC
Confidence 45432 23566688898765 899999999998643 3577
Q ss_pred CCCeecccCC
Q psy5613 253 SNARCRVQNE 262 (1010)
Q Consensus 253 ~~~~C~~~~g 262 (1010)
++|+|+...|
T Consensus 403 ~~g~C~~~~G 412 (426)
T 3zyj_B 403 EAGSCGSDSG 412 (426)
T ss_dssp ----------
T ss_pred CCCcccCCCC
Confidence 7788877655
No 82
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.44 E-value=1.8e-05 Score=91.82 Aligned_cols=78 Identities=24% Similarity=0.658 Sum_probs=36.9
Q ss_pred ceeecCCCCccCCccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCCCCC
Q psy5613 597 PSCTCKAGFTGDPRVFCSRIPPPPPQESPPEYVNPCIPSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECP 676 (1010)
Q Consensus 597 ~~C~C~~Gy~G~~~~~C~~~~~~~~~~~~~~~id~C~~~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C~ 676 (1010)
....|..+|.|.. |+ +++|.. +|.+ ++|++. ++|.|++||+|. +|+. ++|
T Consensus 377 ~p~~C~~~~~g~~---c~--------------~~~C~~-~C~n-G~C~~~---~~C~C~~G~~G~--~C~~-----~~C- 426 (463)
T 2wg3_C 377 MPEECRATVQPAQ---TL--------------TSECSR-LCRN-GYCTPT---GKCCCSPGWEGD--FCRT-----AKC- 426 (463)
T ss_dssp SCGGGCCCCCCCC---CC--------------CCHHHH-HCCS-EEECTT---SCEEECTTEEST--TSCE-----ECC-
T ss_pred ccccCCCCCcCCC---Cc--------------cccccC-CCCC-CccCCC---CeECCCCCcCCC--cCCc-----CcC-
Confidence 3467888999886 75 677864 6987 799864 489999999999 7751 122
Q ss_pred CCccccCCccCCCCCCCCCCCCeeeeeCCcceeeCCCCCccCCCc
Q psy5613 677 YDKACINEKCRDPCPGSCGQGAQCRVINHSPVCYCPDGFIGDAFS 721 (1010)
Q Consensus 677 ~~~~C~~~~C~~~C~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~ 721 (1010)
..+|+++++|++. ++|.|++||+|..|+
T Consensus 427 --------------~~~C~~~g~C~~~---~~C~C~~G~~G~~C~ 454 (463)
T 2wg3_C 427 --------------EPACRHGGVCVRP---NKCLCKKGYLGPQCE 454 (463)
T ss_dssp ---------------------------------------------
T ss_pred --------------CCCCCCCCEECCC---CEEECCCCcccCCCC
Confidence 2368899999865 699999999999997
No 83
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.25 E-value=4e-05 Score=59.64 Aligned_cols=29 Identities=28% Similarity=0.588 Sum_probs=25.3
Q ss_pred CCCCCCeeeee----CCcceeeCCCCCccCCCc
Q psy5613 693 SCGQGAQCRVI----NHSPVCYCPDGFIGDAFS 721 (1010)
Q Consensus 693 ~C~~~~~C~~~----~g~~~C~C~~G~~G~~C~ 721 (1010)
+|.|+|+|++. .++|+|+|++||+|.+|+
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce 47 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE 47 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence 68899999963 457999999999999997
No 84
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.17 E-value=3.9e-05 Score=59.74 Aligned_cols=30 Identities=33% Similarity=0.750 Sum_probs=25.4
Q ss_pred CCCCCCeeeec----CCCceeeCCCCCcCCCCCCccc
Q psy5613 901 SCGQNANCRVI----NHSPICTCRPGFTGEPRIRCSP 933 (1010)
Q Consensus 901 ~C~~~~~C~~~----~g~~~C~C~~G~~G~~~~~C~~ 933 (1010)
+|.|+|+|++. .++|+|.|++||+|. +|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~---~Ce~ 48 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCEY 48 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEEST---TSCE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCC---CCcc
Confidence 67889999963 458999999999999 8874
No 85
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.87 E-value=0.00039 Score=54.12 Aligned_cols=33 Identities=18% Similarity=0.420 Sum_probs=29.2
Q ss_pred CCCCCCCCeec--ccCCceeeeeCCCCccCCCCcC
Q psy5613 248 PSPCGSNARCR--VQNEHALCECLPDYYGNPYEGC 280 (1010)
Q Consensus 248 ~~~C~~~~~C~--~~~g~~~C~C~~Gf~G~~c~~~ 280 (1010)
++||.++|+|+ +..++|+|.|++||+|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 57899999998 6778999999999999998753
No 86
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.81 E-value=0.00078 Score=56.02 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=26.8
Q ss_pred CCCCCCC--CCCCCCCeEeecCCceeeee-cCcccc
Q psy5613 348 YRDPCST--TQCGLNAICTVINGAAQCAC-LLLLQH 380 (1010)
Q Consensus 348 ~~deC~~--~~C~~~~~C~n~~g~~~C~C-~~G~~g 380 (1010)
|||||+. ++|..+++|+|+.|+|+|.+ ..||.+
T Consensus 2 DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 6799984 67988899999999999983 355654
No 87
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.79 E-value=0.001 Score=51.83 Aligned_cols=33 Identities=24% Similarity=0.519 Sum_probs=28.2
Q ss_pred CCCCCCCC----------CCCCCCCeEeecCCceeeeecCccccc
Q psy5613 347 EYRDPCST----------TQCGLNAICTVINGAAQCACLLLLQHH 381 (1010)
Q Consensus 347 ~~~deC~~----------~~C~~~~~C~n~~g~~~C~C~~G~~g~ 381 (1010)
++||||+. .+|. ++|+|++|+|+|.|++||++.
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeEC
Confidence 47799985 5786 599999999999999999874
No 88
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.78 E-value=0.00041 Score=53.98 Aligned_cols=31 Identities=26% Similarity=0.645 Sum_probs=27.7
Q ss_pred CCCCCCCCeee--ecCCceeeeCCCCCccCCCCCcc
Q psy5613 93 PGTCGEGAICD--VVNHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 93 ~~~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
++||.|+|+|+ +..++|+|.|++||+|+. |+
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~---Ce 43 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGER---CQ 43 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTT---SC
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCC---CC
Confidence 57899999998 567789999999999998 87
No 89
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.64 E-value=0.0012 Score=51.42 Aligned_cols=34 Identities=24% Similarity=0.517 Sum_probs=29.2
Q ss_pred CCCCCCCC----------CCCCCCCeecccCCceeeeeCCCCccCC
Q psy5613 241 TPTDPCFP----------SPCGSNARCRVQNEHALCECLPDYYGNP 276 (1010)
Q Consensus 241 ~~~d~C~~----------~~C~~~~~C~~~~g~~~C~C~~Gf~G~~ 276 (1010)
+|||||.. .+|. ++|+++.|+|+|.|++||++..
T Consensus 2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~C~~Gy~~~~ 45 (53)
T 1apq_A 2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCSCRPGYELQE 45 (53)
T ss_dssp CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEECSTTCEECT
T ss_pred CccccccCcccccccccCCCCC--CEeECCCCCeEEECCCCCeECC
Confidence 57899985 5786 5999999999999999999763
No 90
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.57 E-value=0.00051 Score=72.49 Aligned_cols=44 Identities=16% Similarity=0.313 Sum_probs=36.3
Q ss_pred CCCCCCC--CCCCCCCCeEeecCCceeeeecCccccccccccCCcc
Q psy5613 347 EYRDPCS--TTQCGLNAICTVINGAAQCACLLLLQHHIHKNQDMDQ 390 (1010)
Q Consensus 347 ~~~deC~--~~~C~~~~~C~n~~g~~~C~C~~G~~g~~~~~~~~~~ 390 (1010)
+|+|||+ .++|..++.|+|+.|+|.|.|++||.|++..|.++++
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d~d~ 48 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCVAEGS 48 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEEETTC
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCCCCC
Confidence 6889998 5789999999999999999999999998888877765
No 91
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.44 E-value=0.0015 Score=51.37 Aligned_cols=40 Identities=18% Similarity=0.370 Sum_probs=31.7
Q ss_pred CCCCC--CCCCCCCeEeecCCceeeeecCcccc--ccccccCCccc
Q psy5613 350 DPCST--TQCGLNAICTVINGAAQCACLLLLQH--HIHKNQDMDQY 391 (1010)
Q Consensus 350 deC~~--~~C~~~~~C~n~~g~~~C~C~~G~~g--~~~~~~~~~~~ 391 (1010)
|||+. .+|. +.|+|++|+|+|.|++||++ +...|.+++++
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~didec 45 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLADNGKACIPTGPY 45 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEECTTSSCEEESSSS
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccCccc
Confidence 67874 4575 48999999999999999974 55667777766
No 92
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.42 E-value=0.0015 Score=54.32 Aligned_cols=34 Identities=18% Similarity=0.378 Sum_probs=26.1
Q ss_pred cCCCC--CCCCCCCCeeeecCCceeee-CCCCCccCC
Q psy5613 88 KNPCV--PGTCGEGAICDVVNHAVMCT-CPPGTTGSP 121 (1010)
Q Consensus 88 ~~~C~--~~~C~~~~~C~~~~g~~~C~-C~~G~~g~~ 121 (1010)
+|||. .++|.++++|+|+.|+|+|. +..||+++.
T Consensus 3 idEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~ 39 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDL 39 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCC
T ss_pred cccccCCCCCCCCCCEeECCCCCeEecccCCcccccc
Confidence 35554 35798889999999999998 556887654
No 93
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.33 E-value=0.0028 Score=58.84 Aligned_cols=58 Identities=17% Similarity=0.289 Sum_probs=43.7
Q ss_pred CCCCCCeecccC--Cce-eeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCCCCceecC
Q psy5613 250 PCGSNARCRVQN--EHA-LCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSNHIPICYC 326 (1010)
Q Consensus 250 ~C~~~~~C~~~~--g~~-~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~g~~~C~C 326 (1010)
||.|+|+|++.. .+| +|.|++||+|..|+.+++ ..|.. ....+|++.+
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~------------------------~~C~~-----g~G~~YrG~~ 52 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKS------------------------KTCYE-----GNGHFYRGKA 52 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESS------------------------CCSBC-----SSCTTCCSCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCc------------------------CCCcc-----cccccceeec
Confidence 799999999874 556 999999999999886542 01221 1123689999
Q ss_pred CCCcccCCcc
Q psy5613 327 PAGFTGDAFR 336 (1010)
Q Consensus 327 ~~Gy~G~~c~ 336 (1010)
..+++|..|+
T Consensus 53 ~~t~sG~~Cq 62 (122)
T 2fd6_A 53 STDTMGRPCL 62 (122)
T ss_dssp CBBTTSCBBC
T ss_pred cccccCCccc
Confidence 9999999876
No 94
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=96.17 E-value=0.0032 Score=54.74 Aligned_cols=67 Identities=16% Similarity=0.405 Sum_probs=53.0
Q ss_pred CCCCCCCCeeee-cCCceeeeCCCCCccCCCCCcccCCCCCCCCCCCCCC--CCCCCCcceecC-----CCeeeecCCCC
Q psy5613 93 PGTCGEGAICDV-VNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPS--PCGPNSQCREIN-----HQAVCSCLPNY 164 (1010)
Q Consensus 93 ~~~C~~~~~C~~-~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~--~C~~~g~C~~~~-----g~~~C~C~~G~ 164 (1010)
...|..+|.|.+ .+|.++|+|.+||.|+... |..+ ..+.|+.+ -|..++.|+.+. +...|.|.+||
T Consensus 9 ~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~-Cv~~-----~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~ 82 (99)
T 1ob1_C 9 KKQCPQNSGCFRHLDEREECKCLLNYKQEGDK-CVEN-----PNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPD 82 (99)
T ss_dssp SCCCCTTEEEECCTTSCCEEEECTTEEEETTE-EEEC-----SCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTT
T ss_pred cCCCCCCCCeEEcCCCCEEEEecCCeecCCCe-EeeC-----CCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCC
Confidence 346778999988 5788999999999998754 8743 22678754 399999999875 57999999998
Q ss_pred c
Q psy5613 165 F 165 (1010)
Q Consensus 165 ~ 165 (1010)
+
T Consensus 83 ~ 83 (99)
T 1ob1_C 83 S 83 (99)
T ss_dssp C
T ss_pred c
Confidence 5
No 95
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.07 E-value=0.0031 Score=51.93 Aligned_cols=44 Identities=16% Similarity=0.268 Sum_probs=35.1
Q ss_pred CCCCCCCCC--CCCCCCeEeecCC-ceeeeecCcccc--ccccccCCcccc
Q psy5613 347 EYRDPCSTT--QCGLNAICTVING-AAQCACLLLLQH--HIHKNQDMDQYI 392 (1010)
Q Consensus 347 ~~~deC~~~--~C~~~~~C~n~~g-~~~C~C~~G~~g--~~~~~~~~~~~~ 392 (1010)
+|+|||+.. .|. ..|+|+.| +|+|.|++||++ +...|.+++++.
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 577999853 465 48999999 899999999975 567788887763
No 96
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.01 E-value=0.0018 Score=63.57 Aligned_cols=38 Identities=24% Similarity=0.593 Sum_probs=34.2
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPI 128 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~ 128 (1010)
+++|.+.||.++++|.+..++|+|+|++||+|.. ||++
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~---Ce~~ 156 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPE---CEYV 156 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTT---SCEE
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcc---cccC
Confidence 4678888999999999999999999999999998 9854
No 97
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=95.93 E-value=0.0047 Score=53.72 Aligned_cols=72 Identities=26% Similarity=0.622 Sum_probs=51.4
Q ss_pred CCCCCCCCCCCeecc-cCCceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCC----
Q psy5613 245 PCFPSPCGSNARCRV-QNEHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSN---- 319 (1010)
Q Consensus 245 ~C~~~~C~~~~~C~~-~~g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~---- 319 (1010)
.|....|..++.|.+ .++..+|+|.+||.|+.- .|..... ..|..+ .+.|..+|.|+.+.
T Consensus 6 ~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~-----~Cv~~~~----~sC~~n------NGGCd~nA~C~~~~~~~~ 70 (99)
T 1ob1_C 6 QCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGD-----KCVENPN----PTCNEN------NGGCDADAKCTEEDSGSN 70 (99)
T ss_dssp CCCSCCCCTTEEEECCTTSCCEEEECTTEEEETT-----EEEECSC----CCSTTG------GGGCCTTEEEECCSCSSS
T ss_pred EeccCCCCCCCCeEEcCCCCEEEEecCCeecCCC-----eEeeCCC----CChhhc------CCCcCCCceeEecCCccc
Confidence 355567888999987 468999999999998752 2322210 122221 47899999999774
Q ss_pred -CCceecCCCCcc
Q psy5613 320 -HIPICYCPAGFT 331 (1010)
Q Consensus 320 -g~~~C~C~~Gy~ 331 (1010)
+...|.|.+||.
T Consensus 71 ~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 71 GKKITCECTKPDS 83 (99)
T ss_dssp SCCCEEEECSTTC
T ss_pred CCceEeEeCCCCc
Confidence 579999999976
No 98
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.87 E-value=0.0056 Score=56.81 Aligned_cols=55 Identities=20% Similarity=0.436 Sum_probs=40.7
Q ss_pred CCCCCCeeeecC--Cce-eeeCCCCCccCCCCCcccCCCCCCCCCCCCCCCCCCCCcceecCCCeeeecCCCCcCC
Q psy5613 95 TCGEGAICDVVN--HAV-MCTCPPGTTGSPFIQCKPIQNEPVYTNPCQPSPCGPNSQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 95 ~C~~~~~C~~~~--g~~-~C~C~~G~~g~~~~~C~~~~~~~~~~d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
||+|+|+|++.. .+| +|.|++||+|.. |+. +++ .+|..+ ...+|++.+..+++|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~---Ce~------~~~----~~C~~g-----~G~~YrG~~~~t~sG~ 59 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH---CEI------DKS----KTCYEG-----NGHFYRGKASTDTMGR 59 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTT---SCE------ESS----CCSBCS-----SCTTCCSCCCBBTTSC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCcc---ccc------cCc----CCCccc-----ccccceeeccccccCC
Confidence 789999999874 455 999999999998 873 222 123321 2347999999999888
No 99
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=95.74 E-value=0.0028 Score=62.14 Aligned_cols=41 Identities=32% Similarity=0.780 Sum_probs=35.5
Q ss_pred CCCCCCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccCCCCC
Q psy5613 136 NPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDCP 182 (1010)
Q Consensus 136 d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~ 182 (1010)
++|..+||.++|+|++..++|+|.|++||+|. +|++.++|.
T Consensus 120 ~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~------~Ce~~~~c~ 160 (162)
T 1g1s_A 120 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGP------ECEYVRDDD 160 (162)
T ss_dssp CCCCTTGGGGSEEEEECSSSEEEEECTTEEST------TSCEECC--
T ss_pred CCCcCCCCCCCCEEecCCCCceEeCCCCCcCc------ccccCcccC
Confidence 67888999999999999999999999999998 888876553
No 100
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.54 E-value=0.0052 Score=48.69 Aligned_cols=31 Identities=26% Similarity=0.451 Sum_probs=26.1
Q ss_pred CCCCCCeeee----cCCceeeeCCCCCccCCCCCcccC
Q psy5613 95 TCGEGAICDV----VNHAVMCTCPPGTTGSPFIQCKPI 128 (1010)
Q Consensus 95 ~C~~~~~C~~----~~g~~~C~C~~G~~g~~~~~C~~~ 128 (1010)
+|.|+|+|+. ..++|.|.|++||+|.. |+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~---Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQR---CEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSS---SCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCC---Cccc
Confidence 8999999984 34579999999999998 8743
No 101
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=95.37 E-value=0.0023 Score=67.50 Aligned_cols=40 Identities=28% Similarity=0.665 Sum_probs=31.9
Q ss_pred CCCCCCC--CCCCCCCCccccCCCCceeeCCCCcccCCCCCc
Q psy5613 627 EYVNPCI--PSPCGPYSQCRDINGSPSCSCLPNYIGAPPNCR 666 (1010)
Q Consensus 627 ~~id~C~--~~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~ 666 (1010)
.|+|||. .++|+.++.|+|+.|+|.|.|++||+|++..|.
T Consensus 3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 3 LAQQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp ----CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred ccchhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 6899998 568999999999999999999999999865443
No 102
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=95.25 E-value=0.025 Score=49.47 Aligned_cols=64 Identities=20% Similarity=0.431 Sum_probs=51.6
Q ss_pred CCCCCCCeeee-cCCceeeeCCCCCccCCCCCcccCCCCCCCCCC-CCCC--CCCCCCcceecC-CCeeeecCCCCc
Q psy5613 94 GTCGEGAICDV-VNHAVMCTCPPGTTGSPFIQCKPIQNEPVYTNP-CQPS--PCGPNSQCREIN-HQAVCSCLPNYF 165 (1010)
Q Consensus 94 ~~C~~~~~C~~-~~g~~~C~C~~G~~g~~~~~C~~~~~~~~~~d~-C~~~--~C~~~g~C~~~~-g~~~C~C~~G~~ 165 (1010)
..|..+|.|.. .+|..+|+|.+||.++... |..+ ++ |..+ -|..++.|+.+. ..-.|.|..+|.
T Consensus 16 t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~-Cv~~-------Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 16 TNVPENAACYRYLDGTEEWRCLLGFKEVGGK-CVPA-------SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp SCCCTTEEEEECTTSCEEEEECTTEEECSSS-EEEC-------CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCCCeEECCCCCEeEEEECCeeccCCE-EEEC-------CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 35778999988 7888999999999998654 8643 55 6543 488999999885 789999999974
No 103
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.20 E-value=0.0061 Score=47.81 Aligned_cols=44 Identities=25% Similarity=0.567 Sum_probs=31.7
Q ss_pred CCCCC--CCCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCCCCCC
Q psy5613 630 NPCIP--SPCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECPY 677 (1010)
Q Consensus 630 d~C~~--~~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C~~ 677 (1010)
|||.. .+|. ..|+|++|+|+|.|++||... .-...|.++++|+.
T Consensus 2 dEC~~~~~~C~--~~C~nt~Gsy~C~C~~Gy~L~--~d~~~C~didec~c 47 (55)
T 2jkh_L 2 KLCSLDNGDCD--QFCHEEQNSVVCSCARGYTLA--DNGKACIPTGPYPC 47 (55)
T ss_dssp CCTTTGGGGCS--SEEEEETTEEEEECCTTEEEC--TTSSCEEESSSSCT
T ss_pred ccccCCCCCcC--cEeEcCCCCeEEeCCCCCEEC--CCCCeeccCccccC
Confidence 56653 3575 389999999999999999865 22345667776653
No 104
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.19 E-value=0.0085 Score=47.46 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=26.3
Q ss_pred CCCCCCeeee----cCCeeeeeCCCCCccCCCccccCCc
Q psy5613 797 TCGEGAICDV----INHSVVCSCPPGTTGSPFIQCKPVI 831 (1010)
Q Consensus 797 ~C~~~~~C~~----~~g~y~C~C~~G~~G~~~~~C~~~~ 831 (1010)
+|.|+|+|.. ..++|.|.|++||+|. +|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~---~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQ---RCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESS---SSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccC---CCcccC
Confidence 7999999973 3457999999999999 488654
No 105
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=94.76 E-value=0.01 Score=48.89 Aligned_cols=46 Identities=26% Similarity=0.538 Sum_probs=34.7
Q ss_pred CCCCCCCCC--CCCCCCccccCCC-CceeeCCCCcccCCCCCccCCcCCCCCC
Q psy5613 627 EYVNPCIPS--PCGPYSQCRDING-SPSCSCLPNYIGAPPNCRPECVQNTECP 676 (1010)
Q Consensus 627 ~~id~C~~~--~C~~~g~C~~~~g-~y~C~C~~G~~g~~~~C~~~C~~~~~C~ 676 (1010)
+|+++|... .|. ..|+++.| +|+|.|++||... .-...|.+++||.
T Consensus 3 ~d~~eC~~~nggC~--h~C~n~~g~s~~C~C~~Gy~L~--~D~~tC~d~dec~ 51 (69)
T 1kli_L 3 DDQLICVNENGGCE--QYCSDHTGTKRSCRCHEGYSLL--ADGVSCTPTVEYP 51 (69)
T ss_dssp SCCCCTTSGGGGCS--SEEEEETTTEEEEECCTTEEEC--TTSSCEEECSSSC
T ss_pred cccccccCCCCCcC--CEeEcCCCCCEEEeCCCCCeEC--CCCCcccCccccc
Confidence 578999743 465 37999999 8999999999876 3345666777665
No 106
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=94.62 E-value=0.051 Score=47.57 Aligned_cols=67 Identities=21% Similarity=0.438 Sum_probs=52.2
Q ss_pred CCCCCCCCeeee-cCCeeeeeCCCCCccCCCccccCCccCCCCCCC-CCCC--CCCCCCceeecC-CceeeecCCCCcCC
Q psy5613 795 PGTCGEGAICDV-INHSVVCSCPPGTTGSPFIQCKPVIQEPVYTNP-CQPS--PCGPNSQCREVN-KQAVCSCLPNYFGS 869 (1010)
Q Consensus 795 ~~~C~~~~~C~~-~~g~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~-C~~~--~C~~~~~C~~~~-g~~~C~C~~G~~g~ 869 (1010)
...|..++.|.. .+|..+|.|.+||.+++.. |.+. +. |..+ -|..+|.|+.+. ..-.|.|..+|.-.
T Consensus 15 ~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~-Cv~~-------Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~~~ 86 (105)
T 1n1i_A 15 DTNVPENAACYRYLDGTEEWRCLLGFKEVGGK-CVPA-------SITCEENNGGCAPEAECTMDDKKEVECKCTKEGSEP 86 (105)
T ss_dssp SSCCCTTEEEEECTTSCEEEEECTTEEECSSS-EEEC-------CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTCCE
T ss_pred CCCCCCCCCeEECCCCCEeEEEECCeeccCCE-EEEC-------CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCCcc
Confidence 346778999976 7788999999999998753 7642 55 6544 498899999875 77899999997543
No 107
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.54 E-value=0.015 Score=44.75 Aligned_cols=31 Identities=10% Similarity=0.305 Sum_probs=25.6
Q ss_pred CeEeecCCceeeeecCcccc--ccccccCCccc
Q psy5613 361 AICTVINGAAQCACLLLLQH--HIHKNQDMDQY 391 (1010)
Q Consensus 361 ~~C~n~~g~~~C~C~~G~~g--~~~~~~~~~~~ 391 (1010)
+.|+|++|+|+|.|++||+. +...|.+++++
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~~d~~tC~dide~ 42 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLGDDSKSCVSTERF 42 (51)
T ss_dssp SCCCEETTEECCCCCTTEEECTTSSCEEECSSS
T ss_pred CEeEcCCCCeEEeCCCCcEECCCCCccccCCcc
Confidence 37999999999999999974 56667777765
No 108
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.48 E-value=0.014 Score=68.62 Aligned_cols=37 Identities=24% Similarity=0.590 Sum_probs=34.8
Q ss_pred CCCCCCCCCCCCCeecc-cCCceeeeeC-CCCccCCCCc
Q psy5613 243 TDPCFPSPCGSNARCRV-QNEHALCECL-PDYYGNPYEG 279 (1010)
Q Consensus 243 ~d~C~~~~C~~~~~C~~-~~g~~~C~C~-~Gf~G~~c~~ 279 (1010)
+|+|.++||.|+|+|++ ..++|+|.|+ +||+|..|+.
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 68899999999999999 8899999999 9999999885
No 109
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=94.16 E-value=0.018 Score=67.66 Aligned_cols=36 Identities=31% Similarity=0.683 Sum_probs=33.1
Q ss_pred cCCCCCCCCCCCCeeee-cCCceeeeCC-CCCccCCCCCcc
Q psy5613 88 KNPCVPGTCGEGAICDV-VNHAVMCTCP-PGTTGSPFIQCK 126 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~g~~~~~C~ 126 (1010)
+|+|.++||+|+|+|.+ ..++|+|.|+ +||+|.. |+
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~---Ce 39 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPN---CT 39 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTT---TC
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCC---CC
Confidence 46788899999999999 8889999999 9999998 87
No 110
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=94.11 E-value=0.025 Score=66.49 Aligned_cols=37 Identities=27% Similarity=0.664 Sum_probs=32.7
Q ss_pred cCCCCCCCCCCCCeeee-cCCceeeeCC-CCCccCCCCCccc
Q psy5613 88 KNPCVPGTCGEGAICDV-VNHAVMCTCP-PGTTGSPFIQCKP 127 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~-~~g~~~C~C~-~G~~g~~~~~C~~ 127 (1010)
+|+|.++||+|+|+|++ ..++|+|.|+ +||+|.. |+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~---Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGEN---CTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTT---TCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCC---CCC
Confidence 47888999999999996 5589999999 9999998 873
No 111
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.91 E-value=0.027 Score=66.25 Aligned_cols=37 Identities=24% Similarity=0.804 Sum_probs=33.5
Q ss_pred CCCCCCCCCCCCCeecc-cCCceeeeeC-CCCccCCCCc
Q psy5613 243 TDPCFPSPCGSNARCRV-QNEHALCECL-PDYYGNPYEG 279 (1010)
Q Consensus 243 ~d~C~~~~C~~~~~C~~-~~g~~~C~C~-~Gf~G~~c~~ 279 (1010)
+|+|.++||.|+|+|++ ..++|+|.|+ +||+|..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 47899999999999996 5589999999 9999999885
No 112
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=93.04 E-value=0.047 Score=42.25 Aligned_cols=31 Identities=16% Similarity=0.243 Sum_probs=25.8
Q ss_pred CeEeecCC-ceeeeecCcccc--ccccccCCccc
Q psy5613 361 AICTVING-AAQCACLLLLQH--HIHKNQDMDQY 391 (1010)
Q Consensus 361 ~~C~n~~g-~~~C~C~~G~~g--~~~~~~~~~~~ 391 (1010)
..|+|+.| +|+|.|++||+. +...|.+++++
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec 44 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLLADGVSCTPTVEY 44 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEECTTSSCEEECSSS
T ss_pred CEeEcCCCCCEEeeCCCCCEECCCCCcccCCccc
Confidence 47999999 899999999985 56677777776
No 113
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=92.43 E-value=0.051 Score=41.71 Aligned_cols=34 Identities=26% Similarity=0.629 Sum_probs=25.5
Q ss_pred CccccCCCCceeeCCCCcccCCCCCccCCcCCCCCC
Q psy5613 641 SQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECP 676 (1010)
Q Consensus 641 g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C~ 676 (1010)
..|++++|+|+|.|++||... .-...|++++|++
T Consensus 10 ~~C~n~~gs~~C~C~~Gy~L~--~d~~tC~dide~p 43 (51)
T 1kig_L 10 QFCREERSEVRCSCAHGYVLG--DDSKSCVSTERFP 43 (51)
T ss_dssp SCCCEETTEECCCCCTTEEEC--TTSSCEEECSSSC
T ss_pred CEeEcCCCCeEEeCCCCcEEC--CCCCccccCCccc
Confidence 379999999999999999865 2234566666554
No 114
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=92.35 E-value=0.075 Score=51.87 Aligned_cols=38 Identities=24% Similarity=0.631 Sum_probs=33.2
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcccC
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKPI 128 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~~ 128 (1010)
+..|.+++|+++++|.+..++|+|.|++||+|.. |+++
T Consensus 119 ~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~---C~~~ 156 (164)
T 3cfw_A 119 TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQ---CQFV 156 (164)
T ss_dssp ECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSS---SCBC
T ss_pred cCCCCCCcCCCCCeecccCCCceeeeCCCccccc---cccc
Confidence 3456678999999999999999999999999997 9754
No 115
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=92.10 E-value=0.043 Score=53.13 Aligned_cols=38 Identities=24% Similarity=0.577 Sum_probs=33.3
Q ss_pred CCCCCCCCCCCCCeecccCCceeeeeCCCCccCCCCcC
Q psy5613 243 TDPCFPSPCGSNARCRVQNEHALCECLPDYYGNPYEGC 280 (1010)
Q Consensus 243 ~d~C~~~~C~~~~~C~~~~g~~~C~C~~Gf~G~~c~~~ 280 (1010)
+++|.+.||.++++|.+..+.|.|.|.+||+|+.|+.+
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 34567789999999999999999999999999998753
No 116
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.77 E-value=0.084 Score=51.51 Aligned_cols=41 Identities=32% Similarity=0.795 Sum_probs=33.2
Q ss_pred CCCCCCCCCCCCcceecCCCeeeecCCCCcCCCCCCCCCCccCCCCC
Q psy5613 136 NPCQPSPCGPNSQCREINHQAVCSCLPNYFGSPPGCRPECTVNSDCP 182 (1010)
Q Consensus 136 d~C~~~~C~~~g~C~~~~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~ 182 (1010)
..|.+++|.++|+|++..++|.|.|.+||+|+ .|++...|+
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~------~C~~~~~c~ 160 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGP------QCQFVQVDP 160 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSS------SSCBC----
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCcccc------cccccccCc
Confidence 45777899999999999999999999999999 788776554
No 117
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=91.60 E-value=0.065 Score=52.79 Aligned_cols=41 Identities=24% Similarity=0.383 Sum_probs=32.4
Q ss_pred CCcccCCcccCCCCCCCCCCCCCCCCCCC-----CCCCCeEeecCCceeeeecCcccc
Q psy5613 328 AGFTGDAFRQCSPIPQREPEYRDPCSTTQ-----CGLNAICTVINGAAQCACLLLLQH 380 (1010)
Q Consensus 328 ~Gy~G~~c~~C~~i~~~~~~~~deC~~~~-----C~~~~~C~n~~g~~~C~C~~G~~g 380 (1010)
.||.+.... ++++||...+ |.+ .|+|+.|+|+|.|++||++
T Consensus 113 ~Gf~~~~~~----------~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l 158 (170)
T 1szb_A 113 TGFEAFYAA----------EDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVL 158 (170)
T ss_dssp CEEEEEEEE----------EECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEE
T ss_pred cCceeeeec----------cccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEE
Confidence 678776532 4668998544 764 8999999999999999985
No 118
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=91.14 E-value=0.08 Score=44.18 Aligned_cols=34 Identities=35% Similarity=0.870 Sum_probs=26.0
Q ss_pred CCCC---CCCCCCCCeeee--cCCceeeeCCCCCccCCCCCcc
Q psy5613 89 NPCV---PGTCGEGAICDV--VNHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 89 ~~C~---~~~C~~~~~C~~--~~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
++|. .+.|.|+ +|.- ..+.+.|.|++||+|.. |+
T Consensus 38 ~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~R---CE 76 (79)
T 1xdt_R 38 DPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGER---CH 76 (79)
T ss_dssp -CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTT---CC
T ss_pred CCCCccccCcCCCC-EeeeecCCCCeEEEcCCCccccc---cc
Confidence 4554 5789886 9953 34578999999999998 86
No 119
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=91.01 E-value=0.15 Score=38.78 Aligned_cols=29 Identities=31% Similarity=0.915 Sum_probs=24.5
Q ss_pred CCCCCCCeeeee--CCcceeeCCCCCccCCCc
Q psy5613 692 GSCGQGAQCRVI--NHSPVCYCPDGFIGDAFS 721 (1010)
Q Consensus 692 ~~C~~~~~C~~~--~g~~~C~C~~G~~G~~C~ 721 (1010)
+.|.++ +|... .+.+.|.|++||+|.+|+
T Consensus 14 ~yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHG-TCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCC-EEeeccCCCCeEEECCCCCcccCCC
Confidence 578886 99854 467999999999999997
No 120
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=90.83 E-value=0.12 Score=43.17 Aligned_cols=37 Identities=30% Similarity=0.743 Sum_probs=27.3
Q ss_pred CCCCCC---CCCCCCCCeec--ccCCceeeeeCCCCccCCCCc
Q psy5613 242 PTDPCF---PSPCGSNARCR--VQNEHALCECLPDYYGNPYEG 279 (1010)
Q Consensus 242 ~~d~C~---~~~C~~~~~C~--~~~g~~~C~C~~Gf~G~~c~~ 279 (1010)
..++|. .+.|.++ +|+ ...+.+.|.|++||+|..|+.
T Consensus 36 ~~~pC~~~~~~yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 36 KRDPCLRKYKDFCIHG-ECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp ---CTTTTTTTCCSSE-EECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCCCCCccccCcCCCC-EeeeecCCCCeEEEcCCCcccccccc
Confidence 356777 6789985 995 334689999999999998863
No 121
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.78 E-value=0.19 Score=47.94 Aligned_cols=29 Identities=28% Similarity=0.723 Sum_probs=25.0
Q ss_pred CCCCCCeeeec--CCce-eeeCCCCCccCCCCCcc
Q psy5613 95 TCGEGAICDVV--NHAV-MCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 95 ~C~~~~~C~~~--~g~~-~C~C~~G~~g~~~~~C~ 126 (1010)
||+|+|+|+.. ...| +|.|++||.|+. |+
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~---Ce 45 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQH---CE 45 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTT---SC
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCc---ee
Confidence 89999999876 2456 899999999998 87
No 122
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.53 E-value=0.19 Score=47.91 Aligned_cols=32 Identities=19% Similarity=0.427 Sum_probs=27.1
Q ss_pred CCCCCCeeccc--CCce-eeeeCCCCccCCCCcCC
Q psy5613 250 PCGSNARCRVQ--NEHA-LCECLPDYYGNPYEGCR 281 (1010)
Q Consensus 250 ~C~~~~~C~~~--~g~~-~C~C~~Gf~G~~c~~~~ 281 (1010)
||+|+|+|+.. ...| +|.|++||.|..|+.++
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~ 48 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDK 48 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEES
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccc
Confidence 89999999876 2556 89999999999988654
No 123
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.50 E-value=0.12 Score=39.41 Aligned_cols=29 Identities=31% Similarity=0.891 Sum_probs=24.1
Q ss_pred CCCCCCCeeee--eCCcceeeCCCCCccCCCc
Q psy5613 692 GSCGQGAQCRV--INHSPVCYCPDGFIGDAFS 721 (1010)
Q Consensus 692 ~~C~~~~~C~~--~~g~~~C~C~~G~~G~~C~ 721 (1010)
+.|.+ |+|.. ..+.+.|+|++||+|.+|+
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCE 44 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTC
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCC
Confidence 57888 79973 3567899999999999997
No 124
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.45 E-value=0.2 Score=38.07 Aligned_cols=30 Identities=27% Similarity=0.534 Sum_probs=24.0
Q ss_pred CCCCCCCCeee--ecCCceeeeCCCCCccCCCCCcc
Q psy5613 93 PGTCGEGAICD--VVNHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 93 ~~~C~~~~~C~--~~~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
.+.|.+ |+|. ...+.+.|.|++||+|.. |+
T Consensus 17 ~~yC~n-G~C~~i~~~~~~~C~C~~gy~G~R---Ce 48 (50)
T 2rnl_A 17 QNFCIH-GECKYIEHLEAVTCKCQQEYFGER---CG 48 (50)
T ss_dssp GGTCSS-SEEEEETTTTEEEEECCSSCCSSS---CC
T ss_pred hCcCCC-CEEEEecCCCCeeEECCCCccccc---cc
Confidence 367887 5997 345578999999999998 86
No 125
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=90.43 E-value=0.15 Score=32.52 Aligned_cols=24 Identities=71% Similarity=1.558 Sum_probs=21.5
Q ss_pred CCCccCCCCCCCcccccCCccCCC
Q psy5613 68 PECVLNSDCPSNKACIRNKCKNPC 91 (1010)
Q Consensus 68 ~eC~~~~~C~~~~~C~~~~C~~~C 91 (1010)
+||+.+.+|++..+|++..|+|+|
T Consensus 2 pEC~~~sdCp~~~aC~n~kC~dPC 25 (26)
T 1oig_A 2 PECVLNSDCPSNQACVNQKCRDPX 25 (26)
T ss_dssp CSCCSSTTSSTTCEECSSSEECC-
T ss_pred CcccccCcCCcCHhhhcCcccCCC
Confidence 689999999999999999999987
No 126
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=89.81 E-value=0.22 Score=37.79 Aligned_cols=30 Identities=27% Similarity=0.751 Sum_probs=24.8
Q ss_pred CCCCCCCCeeeec--CCceeeeCCCCCccCCCCCcc
Q psy5613 93 PGTCGEGAICDVV--NHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 93 ~~~C~~~~~C~~~--~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
.+.|.+| +|... .+.+.|.|++||+|.. |+
T Consensus 13 ~~yC~nG-~C~~~~~~~~~~C~C~~gy~G~R---Ce 44 (50)
T 3e50_C 13 TQFCFHG-TCRFLVQEDKPACVCHSGYVGAR---CE 44 (50)
T ss_pred cCcccCC-EEeeccCCCCeEEECCCCCcccC---CC
Confidence 4678886 99764 3579999999999998 87
No 127
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=89.23 E-value=0.11 Score=40.07 Aligned_cols=34 Identities=29% Similarity=0.573 Sum_probs=26.0
Q ss_pred CccccCCC-CceeeCCCCcccCCCCCccCCcCCCCCC
Q psy5613 641 SQCRDING-SPSCSCLPNYIGAPPNCRPECVQNTECP 676 (1010)
Q Consensus 641 g~C~~~~g-~y~C~C~~G~~g~~~~C~~~C~~~~~C~ 676 (1010)
..|+++.+ +|+|.|++||... .-.+.|++++||+
T Consensus 11 ~~C~n~~ggs~~C~C~~Gy~L~--~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 11 QYCSDHTGTKRSCRCHEGYSLL--ADGVSCTPTVEYP 45 (53)
T ss_dssp SEEEEETTTEEEEECCTTEEEC--TTSSCEEECSSSC
T ss_pred CEeEcCCCCCEEeeCCCCCEEC--CCCCcccCCcccc
Confidence 36999998 7999999999965 3334667777665
No 128
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=89.23 E-value=0.19 Score=38.29 Aligned_cols=30 Identities=33% Similarity=1.001 Sum_probs=24.5
Q ss_pred CCCCCCCeeeec--CCCceeeCCCCCcCCCCCCccc
Q psy5613 900 GSCGQNANCRVI--NHSPICTCRPGFTGEPRIRCSP 933 (1010)
Q Consensus 900 ~~C~~~~~C~~~--~g~~~C~C~~G~~G~~~~~C~~ 933 (1010)
+.|.+ |+|... .+.+.|.|++||+|. +|+.
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~---RCe~ 45 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGA---RCER 45 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETT---TTCE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccC---CCCe
Confidence 47888 799743 567999999999999 8875
No 129
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=89.03 E-value=0.12 Score=49.89 Aligned_cols=36 Identities=25% Similarity=0.687 Sum_probs=32.7
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcc
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
+++|.+.||.+++.|.+..++|.|.|.+||+|+. ||
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~---Ce 154 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLK---CE 154 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTT---SC
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCcc---cc
Confidence 4567778999999999999999999999999998 87
No 130
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=88.89 E-value=0.24 Score=37.63 Aligned_cols=29 Identities=31% Similarity=0.847 Sum_probs=23.6
Q ss_pred CCCCCCCeeeec--CCCceeeCCCCCcCCCCCCcc
Q psy5613 900 GSCGQNANCRVI--NHSPICTCRPGFTGEPRIRCS 932 (1010)
Q Consensus 900 ~~C~~~~~C~~~--~g~~~C~C~~G~~G~~~~~C~ 932 (1010)
+.|.+ |+|... .+.+.|.|++||+|. +|+
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~---RCe 48 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGE---RCG 48 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSS---SCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccc---ccc
Confidence 47776 599844 557899999999999 886
No 131
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=88.84 E-value=0.089 Score=51.77 Aligned_cols=42 Identities=24% Similarity=0.457 Sum_probs=31.7
Q ss_pred CCCccCCCCCcccCCCCCCCCCCCCCCC-----CCCCCcceecCCCeeeecCCCCcCC
Q psy5613 115 PGTTGSPFIQCKPIQNEPVYTNPCQPSP-----CGPNSQCREINHQAVCSCLPNYFGS 167 (1010)
Q Consensus 115 ~G~~g~~~~~C~~~~~~~~~~d~C~~~~-----C~~~g~C~~~~g~~~C~C~~G~~g~ 167 (1010)
.||.+.. .+ .++++|...+ |.+ .|+++.|+|+|.|++||++.
T Consensus 113 ~Gf~~~~--~~-------~di~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~l~ 159 (170)
T 1szb_A 113 TGFEAFY--AA-------EDIDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYVLH 159 (170)
T ss_dssp CEEEEEE--EE-------EECCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEEEC
T ss_pred cCceeee--ec-------cccCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcEEC
Confidence 6677654 13 3568887543 875 79999999999999999865
No 132
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=87.98 E-value=0.62 Score=51.94 Aligned_cols=61 Identities=26% Similarity=0.530 Sum_probs=44.5
Q ss_pred ceeeCCCCCccCCCccCCCCCCCC-------CCCCCCCCCCCCCCCCCc-cc--------------------Cceee-cC
Q psy5613 707 PVCYCPDGFIGDAFSSCYPKPIEP-------IQAPEQQADPCICAPNAV-CR--------------------DNVCV-CL 757 (1010)
Q Consensus 707 ~~C~C~~G~~G~~C~~C~~~~~~~-------~~~~~c~~~~c~C~~~g~-C~--------------------~~~C~-C~ 757 (1010)
.+|.|..++.|..|+.|.+..... ...+.| .+|.|.+++. |. .++|. |+
T Consensus 286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C--~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~ 363 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANEC--QSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQ 363 (403)
T ss_dssp EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCC--CCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCC
T ss_pred eEeECcCcCcCCCCCCCCccccCCcccccccCCCccc--cccccCCCCcccccCcccccccccccccccCCCCCCCCCCc
Confidence 369999999999999998865432 122344 5667877664 62 35896 99
Q ss_pred CCccCCCCcccC
Q psy5613 758 PDYYGDGYTVCR 769 (1010)
Q Consensus 758 ~G~~G~~c~~~~ 769 (1010)
.+++|..|+.+.
T Consensus 364 ~nt~G~~CErC~ 375 (403)
T 2y38_A 364 HHTTGINCERCL 375 (403)
T ss_dssp SSEESTTSCEEC
T ss_pred CcCcCCCCCcCC
Confidence 999999998643
No 133
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=87.72 E-value=0.28 Score=48.08 Aligned_cols=25 Identities=24% Similarity=0.715 Sum_probs=22.8
Q ss_pred CCCCCCeecC-cceecCCCCccCCCC
Q psy5613 40 NCVPNAVCKD-EVCVCLPDFYGDGYV 64 (1010)
Q Consensus 40 ~C~~~~~C~~-~~C~C~~G~~g~~~~ 64 (1010)
+|.|+|.|+. .+|.|++||+|..|+
T Consensus 154 ~C~ngG~Cv~P~~C~C~~Gw~G~~C~ 179 (188)
T 2ygo_A 154 GCRNGGFCNERRICECPDGFHGPHCE 179 (188)
T ss_dssp CCCTTCEECTTSCEECCTTCBTTTTC
T ss_pred CCCCCCEeCCCCcccCcCCCCCCCCc
Confidence 6999999998 999999999999664
No 134
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=87.71 E-value=0.27 Score=48.25 Aligned_cols=30 Identities=43% Similarity=1.114 Sum_probs=25.0
Q ss_pred CCCCCCCCCeeeeeCCcceeeCCCCCccCCCcc
Q psy5613 690 CPGSCGQGAQCRVINHSPVCYCPDGFIGDAFSS 722 (1010)
Q Consensus 690 C~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~ 722 (1010)
|...|.++|.|+.. .+|.|++||+|..|+.
T Consensus 151 C~~~C~ngG~Cv~P---~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 151 CPGGCRNGGFCNER---RICECPDGFHGPHCEG 180 (188)
T ss_dssp CTTCCCTTCEECTT---SCEECCTTCBTTTTCB
T ss_pred cCCCCCCCCEeCCC---CcccCcCCCCCCCCcC
Confidence 34578999999853 3999999999999973
No 135
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=87.27 E-value=0.59 Score=51.83 Aligned_cols=64 Identities=25% Similarity=0.503 Sum_probs=42.8
Q ss_pred CCcceeeCCCCCccCCCccCCCCCCCC-------CCCCCCCCCCCCCCCCCc-cc-----------Cceee-cCCCccCC
Q psy5613 704 NHSPVCYCPDGFIGDAFSSCYPKPIEP-------IQAPEQQADPCICAPNAV-CR-----------DNVCV-CLPDYYGD 763 (1010)
Q Consensus 704 ~g~~~C~C~~G~~G~~C~~C~~~~~~~-------~~~~~c~~~~c~C~~~g~-C~-----------~~~C~-C~~G~~G~ 763 (1010)
.+++.|.|.+||.|..|+.|.+..... .....| .+|.|..+++ |. .++|. |++||+|.
T Consensus 269 ~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C--~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~ 346 (375)
T 4aqt_A 269 FDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASEC--LPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGA 346 (375)
T ss_dssp TSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCC--CCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEEST
T ss_pred CCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCC--CCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCC
Confidence 456789999999999999988754321 111222 3455655542 31 25885 99999999
Q ss_pred CCcccC
Q psy5613 764 GYTVCR 769 (1010)
Q Consensus 764 ~c~~~~ 769 (1010)
.|+.+.
T Consensus 347 ~Ce~C~ 352 (375)
T 4aqt_A 347 KCERCR 352 (375)
T ss_dssp TSCEEC
T ss_pred CCCCCC
Confidence 997643
No 136
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=86.01 E-value=0.39 Score=37.94 Aligned_cols=29 Identities=10% Similarity=0.203 Sum_probs=22.1
Q ss_pred CeEeecC-CceeeeecCcccc--ccccccCCc
Q psy5613 361 AICTVIN-GAAQCACLLLLQH--HIHKNQDMD 389 (1010)
Q Consensus 361 ~~C~n~~-g~~~C~C~~G~~g--~~~~~~~~~ 389 (1010)
..|+|++ |+|+|.|++||.+ +...|.+++
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~~D~~tC~d~~ 42 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLAENQKSCEPAV 42 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEECTTSSCEEESS
T ss_pred CEeEeCCCCCEEeeCCCCcEECCCCCcccCCC
Confidence 4799999 6999999999975 444555543
No 137
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=85.99 E-value=0.65 Score=51.46 Aligned_cols=71 Identities=21% Similarity=0.487 Sum_probs=48.1
Q ss_pred cCCCccccCCCCCccCCCccccCCCCCCC---CCCCCCCCCCCCCCCCCC-eecc-------cCCceee-eeCCCCccCC
Q psy5613 209 YNHNPVCSCPPGYTGNPFSQCLLPPTPTP---TQATPTDPCFPSPCGSNA-RCRV-------QNEHALC-ECLPDYYGNP 276 (1010)
Q Consensus 209 ~~g~~~C~C~~Gy~g~~c~~C~~~~~~~~---~~~~~~d~C~~~~C~~~~-~C~~-------~~g~~~C-~C~~Gf~G~~ 276 (1010)
..+.+.|.|++||+|..|++|...+...+ ........|....|..++ .|.. ...+..| .|++||+|..
T Consensus 268 ~~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~ 347 (375)
T 4aqt_A 268 EFDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAK 347 (375)
T ss_dssp TTSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTT
T ss_pred CCCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCC
Confidence 34678899999999999999976654321 233455667766665444 2321 1245678 4999999999
Q ss_pred CCc
Q psy5613 277 YEG 279 (1010)
Q Consensus 277 c~~ 279 (1010)
|+.
T Consensus 348 Ce~ 350 (375)
T 4aqt_A 348 CER 350 (375)
T ss_dssp SCE
T ss_pred CCC
Confidence 874
No 138
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=85.23 E-value=0.55 Score=53.20 Aligned_cols=38 Identities=21% Similarity=0.554 Sum_probs=34.3
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeeCC-CCccCCCCc
Q psy5613 242 PTDPCFPSPCGSNARCRVQNEHALCECLP-DYYGNPYEG 279 (1010)
Q Consensus 242 ~~d~C~~~~C~~~~~C~~~~g~~~C~C~~-Gf~G~~c~~ 279 (1010)
..++|..+||.++++|+..+++|.|.|+. ||.|..|+.
T Consensus 184 ~~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 184 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CSSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred CCCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 45789999999999999999999999996 999998764
No 139
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=84.21 E-value=1.4 Score=49.03 Aligned_cols=67 Identities=19% Similarity=0.435 Sum_probs=49.4
Q ss_pred ccccCCCCCccCCCccccCCCCCCC---CCCCCCCCCCCCCCCCCCe-ecc----------------cCCceeee-eCCC
Q psy5613 213 PVCSCPPGYTGNPFSQCLLPPTPTP---TQATPTDPCFPSPCGSNAR-CRV----------------QNEHALCE-CLPD 271 (1010)
Q Consensus 213 ~~C~C~~Gy~g~~c~~C~~~~~~~~---~~~~~~d~C~~~~C~~~~~-C~~----------------~~g~~~C~-C~~G 271 (1010)
.+|.|+.+++|..|++|..++...+ ......++|...+|..++. |.- ..++..|. |+.+
T Consensus 286 g~C~C~hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~n 365 (403)
T 2y38_A 286 LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHH 365 (403)
T ss_dssp EEECCCTTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSS
T ss_pred eEeECcCcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCc
Confidence 4599999999999999988775432 1223456898888876654 841 13567995 9999
Q ss_pred CccCCCCc
Q psy5613 272 YYGNPYEG 279 (1010)
Q Consensus 272 f~G~~c~~ 279 (1010)
++|..|+.
T Consensus 366 t~G~~CEr 373 (403)
T 2y38_A 366 TTGINCER 373 (403)
T ss_dssp EESTTSCE
T ss_pred CcCCCCCc
Confidence 99999884
No 140
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=83.51 E-value=0.63 Score=52.72 Aligned_cols=36 Identities=19% Similarity=0.606 Sum_probs=32.8
Q ss_pred cCCCCCCCCCCCCeeeecCCceeeeCCC-CCccCCCCCcc
Q psy5613 88 KNPCVPGTCGEGAICDVVNHAVMCTCPP-GTTGSPFIQCK 126 (1010)
Q Consensus 88 ~~~C~~~~C~~~~~C~~~~g~~~C~C~~-G~~g~~~~~C~ 126 (1010)
.++|.++||.++|+|....++|.|.|+. ||+|+. |+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~---C~ 221 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL---CN 221 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTT---SC
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCC---CC
Confidence 3678889999999999999999999996 999998 86
No 141
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=81.80 E-value=0.83 Score=36.01 Aligned_cols=21 Identities=29% Similarity=0.585 Sum_probs=18.3
Q ss_pred CccccCC-CCceeeCCCCcccC
Q psy5613 641 SQCRDIN-GSPSCSCLPNYIGA 661 (1010)
Q Consensus 641 g~C~~~~-g~y~C~C~~G~~g~ 661 (1010)
..|++++ |+|+|.|++||...
T Consensus 11 ~~C~n~~~gs~~C~C~~Gy~L~ 32 (59)
T 2wph_E 11 QFCKNSADNKVVCSCTEGYRLA 32 (59)
T ss_dssp SEEEECSTTCEEEECCTTEEEC
T ss_pred CEeEeCCCCCEEeeCCCCcEEC
Confidence 3799988 69999999999865
No 142
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=81.32 E-value=0.86 Score=48.31 Aligned_cols=85 Identities=14% Similarity=0.299 Sum_probs=48.6
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCeecCcceecCCCCccCCCCcCCCCCccCCCCC--CCcccccCCccCCCCCCCCCC
Q psy5613 21 FFTYFCVNSVPPPVQQDTCNCVPNAVCKDEVCVCLPDFYGDGYVSCRPECVLNSDCP--SNKACIRNKCKNPCVPGTCGE 98 (1010)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~c~C~~~~~C~~~~C~C~~G~~g~~~~~~~~eC~~~~~C~--~~~~C~~~~C~~~C~~~~C~~ 98 (1010)
+.++.|...|.... ...-+|+.||.|.-++|+|.+||+|+.|+ |.....-. ....|.. +. ....|..
T Consensus 179 ~~~~~C~C~C~~~~-~~~~~C~g~G~~~CG~C~C~~g~~G~~Ce-----C~~~~~~~~~~~~~C~~----~~-~~~~CSg 247 (280)
T 2p26_A 179 QVLPQCECRCRDQS-RDRSLCHGKGFLECGICRCDTGYIGKNCE-----CQTQGRSSQELEGSCRK----DN-NSIICSG 247 (280)
T ss_dssp EEEECCCCCCCCST-TCTTGGGGSEEEETTEEEECTTEESTTSC-----EECTTSCHHHHHHTTCS----ST-TSCGGGG
T ss_pred EECCcEeCcCcCCC-CcCCccCCCCeECCCceeCCCCCcCCcce-----ecCCccccccccccCCC----CC-CCCccCC
Confidence 45566666553321 11113888899999999999999999773 22211000 0001110 00 0124777
Q ss_pred CCeeeecCCceeeeCCCCCccC
Q psy5613 99 GAICDVVNHAVMCTCPPGTTGS 120 (1010)
Q Consensus 99 ~~~C~~~~g~~~C~C~~G~~g~ 120 (1010)
+|+|+-. +|.|.++|.+.
T Consensus 248 rG~C~CG----~C~C~~~~~~~ 265 (280)
T 2p26_A 248 LGDCVCG----QCLCHTSDVPG 265 (280)
T ss_dssp SEEEETT----EEEECCCSSTT
T ss_pred CceEeCC----eeECcCCCCCC
Confidence 8888753 89998887544
No 143
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=81.10 E-value=0.75 Score=48.77 Aligned_cols=65 Identities=15% Similarity=0.353 Sum_probs=42.0
Q ss_pred CCCCCcccCceeecCCCccCCCCcccCCCCCC---CCCCCCCcccccCCccCCCCCCCCCCCCeeeecCCeeeeeCCCCC
Q psy5613 743 CAPNAVCRDNVCVCLPDYYGDGYTVCRPECVR---NSDCANNKACIRNKCKNPCVPGTCGEGAICDVINHSVVCSCPPGT 819 (1010)
Q Consensus 743 C~~~g~C~~~~C~C~~G~~G~~c~~~~~~C~~---~~~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~y~C~C~~G~ 819 (1010)
|..+|+|.-+.|.|.+||+|..|+....+=.. ...|.... ....|.+.|.|+-. +|.|..+|
T Consensus 198 C~g~G~~~CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~-----------~~~~CSgrG~C~CG----~C~C~~~~ 262 (280)
T 2p26_A 198 CHGKGFLECGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN-----------NSIICSGLGDCVCG----QCLCHTSD 262 (280)
T ss_dssp GGGSEEEETTEEEECTTEESTTSCEECTTSCHHHHHHTTCSST-----------TSCGGGGSEEEETT----EEEECCCS
T ss_pred cCCCCeECCCceeCCCCCcCCcceecCCccccccccccCCCCC-----------CCCccCCCceEeCC----eeECcCCC
Confidence 66788888899999999999999742211000 00121100 02358778888765 99998887
Q ss_pred ccC
Q psy5613 820 TGS 822 (1010)
Q Consensus 820 ~G~ 822 (1010)
.+.
T Consensus 263 ~~~ 265 (280)
T 2p26_A 263 VPG 265 (280)
T ss_dssp STT
T ss_pred CCC
Confidence 654
No 144
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=78.36 E-value=0.58 Score=55.54 Aligned_cols=46 Identities=15% Similarity=0.176 Sum_probs=37.0
Q ss_pred eeCCCCCccCCCccCCCCCCCCCCCCCCCCCCCCCCCCCcccCceeecCCCccCCCCcc
Q psy5613 709 CYCPDGFIGDAFSSCYPKPIEPIQAPEQQADPCICAPNAVCRDNVCVCLPDYYGDGYTV 767 (1010)
Q Consensus 709 C~C~~G~~G~~C~~C~~~~~~~~~~~~c~~~~c~C~~~g~C~~~~C~C~~G~~G~~c~~ 767 (1010)
-.|.+||.|+.|.. . ..| |..|..+|.|++++|+|.+||.|..|..
T Consensus 520 ~~C~~gw~g~dc~i---------~-~~C---p~~C~ghG~C~~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 520 FDKQQTWAIDNVYI---------G-DGC---LDMCSGHGRCVQGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CCTTCCEEEEEEEE---------E-SCS---SGGGGGSEEEETTEEEECTTEESTTSCE
T ss_pred CccCCCcccccccc---------c-CCC---CcccCCCcEECCCCEeeCCCccCCCcCc
Confidence 37899999999861 0 122 2359999999999999999999999875
No 145
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=76.63 E-value=1.6 Score=56.96 Aligned_cols=39 Identities=21% Similarity=0.535 Sum_probs=35.0
Q ss_pred CCCCCCCCCCCCCCeecccCCceeeeeC-CCCccCCCCcC
Q psy5613 242 PTDPCFPSPCGSNARCRVQNEHALCECL-PDYYGNPYEGC 280 (1010)
Q Consensus 242 ~~d~C~~~~C~~~~~C~~~~g~~~C~C~-~Gf~G~~c~~~ 280 (1010)
..+.|..+||.++|+|+..+.+|.|.|+ +||+|..|+..
T Consensus 1016 ~~~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1016 PSTTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred ccCceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 4578999999999999999999999999 69999998753
No 146
>1oig_A Dumpy, CG33196-PB; structural protein; NMR {Drosophila melanogaster} SCOP: g.3.18.1
Probab=76.47 E-value=1.3 Score=28.27 Aligned_cols=24 Identities=63% Similarity=1.448 Sum_probs=20.3
Q ss_pred CCCCCCCCCCCcchhccCCccCCC
Q psy5613 452 PECVQNSDCPRNKACIRNKCKNPC 475 (1010)
Q Consensus 452 ~~C~~~~~C~~~~~C~~~~C~~~C 475 (1010)
+||..+.+|+....|+..+|+++|
T Consensus 2 pEC~~~sdCp~~~aC~n~kC~dPC 25 (26)
T 1oig_A 2 PECVLNSDCPSNQACVNQKCRDPX 25 (26)
T ss_dssp CSCCSSTTSSTTCEECSSSEECC-
T ss_pred CcccccCcCCcCHhhhcCcccCCC
Confidence 578888999999999999998877
No 147
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=69.75 E-value=2.7 Score=54.64 Aligned_cols=35 Identities=20% Similarity=0.646 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCeeeecCCceeeeCC-CCCccCCCCCcc
Q psy5613 89 NPCVPGTCGEGAICDVVNHAVMCTCP-PGTTGSPFIQCK 126 (1010)
Q Consensus 89 ~~C~~~~C~~~~~C~~~~g~~~C~C~-~G~~g~~~~~C~ 126 (1010)
+.|..+||.|+|+|.....+|+|.|+ +||+|.. |+
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~---C~ 1053 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPL---CN 1053 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTT---SC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCC---cc
Confidence 67888999999999999999999999 6999998 86
No 148
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=69.45 E-value=2.1 Score=41.14 Aligned_cols=33 Identities=21% Similarity=0.504 Sum_probs=26.5
Q ss_pred CCCCCCCC---CCCCCCCeEeecCCceeeeecCccccc
Q psy5613 347 EYRDPCST---TQCGLNAICTVINGAAQCACLLLLQHH 381 (1010)
Q Consensus 347 ~~~deC~~---~~C~~~~~C~n~~g~~~C~C~~G~~g~ 381 (1010)
.++|||.. .+|. +.|.|+.|+|+|.|.+||++.
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred ccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 45688974 3564 589999999999999999853
No 149
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=68.94 E-value=1 Score=53.44 Aligned_cols=40 Identities=20% Similarity=0.351 Sum_probs=30.0
Q ss_pred CCccccccccCCCCCCCCCCCC--CCCCCCeecCcceecCCCCccCCCC
Q psy5613 18 EDKFFTYFCVNSVPPPVQQDTC--NCVPNAVCKDEVCVCLPDFYGDGYV 64 (1010)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~c--~C~~~~~C~~~~C~C~~G~~g~~~~ 64 (1010)
..+|.|.+|... ..| .|+.||+|++++|+|.+||+|..|.
T Consensus 523 ~~gw~g~dc~i~-------~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~ 564 (725)
T 2e26_A 523 QQTWAIDNVYIG-------DGCLDMCSGHGRCVQGSCVCDEQWGGLYCD 564 (725)
T ss_dssp TCCEEEEEEEEE-------SCSSGGGGGSEEEETTEEEECTTEESTTSC
T ss_pred CCCccccccccc-------CCCCcccCCCcEECCCCEeeCCCccCCCcC
Confidence 345566666621 234 5999999999999999999998653
No 150
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=68.19 E-value=4 Score=34.76 Aligned_cols=72 Identities=19% Similarity=0.480 Sum_probs=49.6
Q ss_pred CCCCCCCCCCCeecccC-CceeeeeCCCCccCCCCcCCCCCccCCCCCCccccccCCCCCCCCCCCCCCeeccCCC-CCc
Q psy5613 245 PCFPSPCGSNARCRVQN-EHALCECLPDYYGNPYEGCRPECLINSDCPLSLACIKNHCRDPCPGTCGVQAICSVSN-HIP 322 (1010)
Q Consensus 245 ~C~~~~C~~~~~C~~~~-g~~~C~C~~Gf~G~~c~~~~~eC~~~~~C~~~~~C~~~~C~~~c~~~C~~~~~C~~~~-g~~ 322 (1010)
.|....|..++.|.... +.-.|+|..+|.-+. ..|..+.+ ..|..+ .|.|..+|.|.... ..-
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~-----~kCV~~~~----~~C~~N------NGGCd~nA~C~~~~~~kI 70 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDA-----GKCVPAPN----MTCKDK------NGGCAPEAECKMNDKNEI 70 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEET-----TEEEECTT----CCTTTG------GGGSCTTSEEEECTTSCE
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecC-----CEEEcCCC----CCcccc------CCCcCCCcceeecCCCcE
Confidence 35555788899999864 788999999997432 12322210 122222 57899999998776 678
Q ss_pred eecCCCCcc
Q psy5613 323 ICYCPAGFT 331 (1010)
Q Consensus 323 ~C~C~~Gy~ 331 (1010)
.|.|...+.
T Consensus 71 vC~C~~~~~ 79 (95)
T 1b9w_A 71 VCKCTKEGS 79 (95)
T ss_dssp EEECCSTTE
T ss_pred EEECCCCCC
Confidence 999998864
No 151
>1b9w_A Protein (merozoite surface protein 1); MSP-1, candidate malaria vaccine, surface antigen; 1.80A {Plasmodium cynomolgi} SCOP: g.3.11.4 g.3.11.4 PDB: 2npr_A
Probab=66.79 E-value=6.6 Score=33.49 Aligned_cols=71 Identities=18% Similarity=0.512 Sum_probs=49.1
Q ss_pred CCCCCCCCCCCceeec-CCceeeecCCCCcCCCCCCCCCCccCCCCCCcccccCCcccCCCCCCCCCCCeeeecC-CCce
Q psy5613 839 PCQPSPCGPNSQCREV-NKQAVCSCLPNYFGSPPNCRPECTVNTDCPLDKACVNQKCVDPCPGSCGQNANCRVIN-HSPI 916 (1010)
Q Consensus 839 ~C~~~~C~~~~~C~~~-~g~~~C~C~~G~~g~~~~C~~~C~~~~~C~~~~~C~~~~C~~~C~~~C~~~~~C~~~~-g~~~ 916 (1010)
.|....|..++.|... .|.-.|+|.+||.-++..|. ... ...|..+ .+.|..+|+|.... ..-.
T Consensus 6 ~C~~tkcp~NA~Cyr~~dg~EecRCllnykk~~~kCV----~~~----~~~C~~N------NGGCd~nA~C~~~~~~kIv 71 (95)
T 1b9w_A 6 RCIDTNVPENAACYRYLDGTEEWRCLLYFKEDAGKCV----PAP----NMTCKDK------NGGCAPEAECKMNDKNEIV 71 (95)
T ss_dssp SCSSCCCCTTEEEEECTTSCEEEEECTTEEEETTEEE----ECT----TCCTTTG------GGGSCTTSEEEECTTSCEE
T ss_pred ccccCCCCCCcCeEEEcCCCEEEEEECCeEecCCEEE----cCC----CCCcccc------CCCcCCCcceeecCCCcEE
Confidence 3544567888999985 56789999999987654443 221 0122221 35788899999886 6789
Q ss_pred eeCCCCC
Q psy5613 917 CTCRPGF 923 (1010)
Q Consensus 917 C~C~~G~ 923 (1010)
|+|...+
T Consensus 72 C~C~~~~ 78 (95)
T 1b9w_A 72 CKCTKEG 78 (95)
T ss_dssp EECCSTT
T ss_pred EECCCCC
Confidence 9998775
No 152
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=62.12 E-value=3.8 Score=39.19 Aligned_cols=33 Identities=27% Similarity=0.694 Sum_probs=27.1
Q ss_pred CCCCCCCC---CCCCCCCeecccCCceeeeeCCCCccC
Q psy5613 241 TPTDPCFP---SPCGSNARCRVQNEHALCECLPDYYGN 275 (1010)
Q Consensus 241 ~~~d~C~~---~~C~~~~~C~~~~g~~~C~C~~Gf~G~ 275 (1010)
+++++|.. .+|. +.|++..++|+|.|++||++.
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~n~~g~~~C~C~~Gy~l~ 150 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCNNFIGGYFCSCPPEYFLH 150 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEEEETTEEEEECCTTCEEC
T ss_pred ccCcccCCCCCCCCC--CcccCcCCCEEEecCCCcEEC
Confidence 57888974 3564 589999999999999999854
No 153
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=57.57 E-value=4.1 Score=43.27 Aligned_cols=30 Identities=17% Similarity=0.496 Sum_probs=24.2
Q ss_pred CCCCCCC---CCCCCCeEeecCCceeeeecCcccc
Q psy5613 349 RDPCSTT---QCGLNAICTVINGAAQCACLLLLQH 380 (1010)
Q Consensus 349 ~deC~~~---~C~~~~~C~n~~g~~~C~C~~G~~g 380 (1010)
.|||... .|. ..|+++.++|+|.|.+||..
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l 34 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRL 34 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEE
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCccc
Confidence 4788754 564 58999999999999999975
No 154
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=55.45 E-value=4.2 Score=44.65 Aligned_cols=37 Identities=24% Similarity=0.414 Sum_probs=20.3
Q ss_pred CCCCC-CCCCCCCCeEeecCCceeeeecCcccc--ccccccC
Q psy5613 349 RDPCS-TTQCGLNAICTVINGAAQCACLLLLQH--HIHKNQD 387 (1010)
Q Consensus 349 ~deC~-~~~C~~~~~C~n~~g~~~C~C~~G~~g--~~~~~~~ 387 (1010)
+|||+ ...|. ..|+|+.|+|+|.|.+||.. +...|..
T Consensus 1 i~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~~d~~~C~~ 40 (349)
T 3v64_C 1 VNECAEEGYCS--QGCTNSEGAFQCWCEAGYELRPDRRSCKA 40 (349)
T ss_dssp --------CCS--SEECCC---CCEECCTTEEECTTSSCEEE
T ss_pred CcccCCCCCCc--CeeecCCCCeEEECCCCccCCCCCCcccc
Confidence 37776 34565 48999999999999999975 3444443
No 155
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=55.21 E-value=6.5 Score=41.66 Aligned_cols=44 Identities=30% Similarity=0.636 Sum_probs=29.9
Q ss_pred CCCCCCC---CCCCCCccccCCCCceeeCCCCcccCCCCCccCCcCCCCCC
Q psy5613 629 VNPCIPS---PCGPYSQCRDINGSPSCSCLPNYIGAPPNCRPECVQNTECP 676 (1010)
Q Consensus 629 id~C~~~---~C~~~g~C~~~~g~y~C~C~~G~~g~~~~C~~~C~~~~~C~ 676 (1010)
+|||... .|. ..|.++.++|+|.|.+||... .-.+.|.+.++|.
T Consensus 2 ~~eC~~~~~~~C~--~~C~~~~~~~~C~C~~G~~l~--~d~~sC~p~~~c~ 48 (283)
T 3f1s_B 2 KNECHPERTDGCQ--HFCLPGQESYTCSCAQGYRLG--EDHKQCVPHDQCA 48 (283)
T ss_dssp -CCCCSSCSSSCS--SBCCCCTTSCCCBCCTTEEEC--TTSSCEEECSTTC
T ss_pred CCccCCCCCCCCC--CEeeCCCCCeEecCCCCcccC--CCCCccccccccc
Confidence 5777643 555 479999999999999999876 2234455544443
No 156
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=46.90 E-value=6.1 Score=43.31 Aligned_cols=31 Identities=19% Similarity=0.435 Sum_probs=17.8
Q ss_pred CCCCC-CCCCCCCCeecccCCceeeeeCCCCccC
Q psy5613 243 TDPCF-PSPCGSNARCRVQNEHALCECLPDYYGN 275 (1010)
Q Consensus 243 ~d~C~-~~~C~~~~~C~~~~g~~~C~C~~Gf~G~ 275 (1010)
+|||+ ...|. ..|+++.|+|+|.|++||...
T Consensus 1 i~ec~~~~~C~--~~C~n~~g~~~C~C~~g~~l~ 32 (349)
T 3v64_C 1 VNECAEEGYCS--QGCTNSEGAFQCWCEAGYELR 32 (349)
T ss_dssp --------CCS--SEECCC---CCEECCTTEEEC
T ss_pred CcccCCCCCCc--CeeecCCCCeEEECCCCccCC
Confidence 46776 23464 589999999999999999864
No 157
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=39.89 E-value=6.1 Score=43.33 Aligned_cols=25 Identities=24% Similarity=0.719 Sum_probs=22.4
Q ss_pred CCCC--CCCCCeecCcceecCCCCccC
Q psy5613 37 DTCN--CVPNAVCKDEVCVCLPDFYGD 61 (1010)
Q Consensus 37 ~~c~--C~~~~~C~~~~C~C~~G~~g~ 61 (1010)
..|| |+.||.|.+++|+|.+||.|+
T Consensus 192 ~~Cp~~CsGhG~C~~g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISGVCFCDLGYTAA 218 (387)
T ss_dssp SCCGGGGGGSEEEETTEEEECTTEEEE
T ss_pred ccCccccCCCceecCCeEEecCCcccC
Confidence 3465 999999999999999999996
No 158
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=36.03 E-value=29 Score=39.68 Aligned_cols=33 Identities=30% Similarity=0.718 Sum_probs=27.4
Q ss_pred CCCCCCCCeeeec-CCceeeeCCCCCccCCCCCcc
Q psy5613 93 PGTCGEGAICDVV-NHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 93 ~~~C~~~~~C~~~-~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
.++|..+++|+.+ .|.|.|.|+.||.|.... |.
T Consensus 26 ~~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~~-c~ 59 (551)
T 3fby_A 26 PSECHEHADCVLERDGSRSCVCAVGWAGNGIL-CG 59 (551)
T ss_dssp BCCCCTTEEEEECTTSCEEEEECTTEESSSSS-CE
T ss_pred CCCCCCCCeeEeCCCCCEecCCCCCCCCCCcc-cC
Confidence 3689999999986 567999999999998743 65
No 159
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=34.06 E-value=13 Score=43.28 Aligned_cols=68 Identities=16% Similarity=0.343 Sum_probs=40.5
Q ss_pred CCCCCCeeeecCCeeeeeCCCCCccCCCccccCCccCCCCCCCCCCC---CCCCCCceeecCCceeeecCCCCcCC
Q psy5613 797 TCGEGAICDVINHSVVCSCPPGTTGSPFIQCKPVIQEPVYTNPCQPS---PCGPNSQCREVNKQAVCSCLPNYFGS 869 (1010)
Q Consensus 797 ~C~~~~~C~~~~g~y~C~C~~G~~G~~~~~C~~~~~~~~~~~~C~~~---~C~~~~~C~~~~g~~~C~C~~G~~g~ 869 (1010)
.|...|......| +|.|.+||...+. .|+. ++.+++....... +|..+.. ....|+|.|.|..||.-.
T Consensus 251 ~C~~dG~w~~p~G--~C~C~~G~e~~~~-~C~a-C~~g~~k~~~~~~~C~~CP~~S~-s~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 251 HCAVDGEWLVPIG--QCLCQAGYEKVED-ACQA-CSPGFFKFEASESPCLECPEHTL-PSPEGATSCECEEGFFRA 321 (536)
T ss_dssp EECTTSCBCCCBC--CCEECTTEEEETT-EEEE-CCTTEECCSCCSSCCEECCSSEE-CCCTTCSSCEECTTCBCC
T ss_pred EEcCCCCEecccC--cEeccCccccCCc-eeee-cCCCCCcccCCCCccccCCCCCC-CCCCCccEEEEecccccc
Confidence 3666666655556 9999999985432 3642 4444333222221 3433322 235688999999999855
No 160
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=31.30 E-value=19 Score=41.21 Aligned_cols=32 Identities=28% Similarity=0.747 Sum_probs=26.8
Q ss_pred CCCCCCCeeeec-CCCceeeCCCCCcCCCCCCcc
Q psy5613 900 GSCGQNANCRVI-NHSPICTCRPGFTGEPRIRCS 932 (1010)
Q Consensus 900 ~~C~~~~~C~~~-~g~~~C~C~~G~~G~~~~~C~ 932 (1010)
++|+.++.|+.+ .+.|.|.|+.||.|.+. .|.
T Consensus 27 ~~c~~~a~C~~~~~~~~~c~C~~G~ag~G~-~c~ 59 (551)
T 3fby_A 27 SECHEHADCVLERDGSRSCVCAVGWAGNGI-LCG 59 (551)
T ss_dssp CCCCTTEEEEECTTSCEEEEECTTEESSSS-SCE
T ss_pred CCCCCCCeeEeCCCCCEecCCCCCCCCCCc-ccC
Confidence 589999999988 46789999999999875 354
No 161
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=30.93 E-value=15 Score=42.69 Aligned_cols=67 Identities=22% Similarity=0.476 Sum_probs=39.1
Q ss_pred CCCCCeecC--cceecCCCCccCCCCcCCCCCccCC--CCCCCcccccCCccCCCCCCCCCCCCeeeecCCceeeeCCCC
Q psy5613 41 CVPNAVCKD--EVCVCLPDFYGDGYVSCRPECVLNS--DCPSNKACIRNKCKNPCVPGTCGEGAICDVVNHAVMCTCPPG 116 (1010)
Q Consensus 41 C~~~~~C~~--~~C~C~~G~~g~~~~~~~~eC~~~~--~C~~~~~C~~~~C~~~C~~~~C~~~~~C~~~~g~~~C~C~~G 116 (1010)
|+..|.+.- +.|+|.+||...+. .|. .|..+. ...... .| .+|..+.. ....|+|.|.|..|
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e~~~~-~C~-aC~~g~~k~~~~~~---------~C--~~CP~~S~-s~~~Gs~~C~C~ng 317 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYEKVED-ACQ-ACSPGFFKFEASES---------PC--LECPEHTL-PSPEGATSCECEEG 317 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEEEETT-EEE-ECCTTEECCSCCSS---------CC--EECCSSEE-CCCTTCSSCEECTT
T ss_pred EcCCCCEecccCcEeccCccccCCc-eee-ecCCCCCcccCCCC---------cc--ccCCCCCC-CCCCCccEEEEecc
Confidence 888999976 89999999985431 111 122221 000111 12 13444433 34568899999999
Q ss_pred CccCC
Q psy5613 117 TTGSP 121 (1010)
Q Consensus 117 ~~g~~ 121 (1010)
|....
T Consensus 318 ~~ra~ 322 (536)
T 3fl7_A 318 FFRAP 322 (536)
T ss_dssp CBCCT
T ss_pred ccccC
Confidence 97543
No 162
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=22.98 E-value=25 Score=40.54 Aligned_cols=48 Identities=23% Similarity=0.733 Sum_probs=37.8
Q ss_pred CCCCCCcccccCCcc-------CCCCC----CCCCCCCeeeecCCceeeeCCCCCccCCCCCccc
Q psy5613 74 SDCPSNKACIRNKCK-------NPCVP----GTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCKP 127 (1010)
Q Consensus 74 ~~C~~~~~C~~~~C~-------~~C~~----~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~~ 127 (1010)
..|.++..|++..|+ ..|.. ..|..+|+|.|.. .|+|.+||..+. |+.
T Consensus 423 T~CG~~~vC~n~~C~~~~~~~~~~C~~~~~~~~C~~~GVCNn~~---~CHC~~GwaPP~---C~~ 481 (510)
T 3g5c_A 423 TPCGPQMMCLEHRCLPVASFNFSTCLSSKEGTICSGNGVCSNEL---KCVCNRHWIGSD---CNT 481 (510)
T ss_dssp CEEETTEEESSSCEEEGGGGCCCCCCCSSTTCSGGGTEEEBTTS---CEEECTTEESTT---SCE
T ss_pred CccCCCCeEeCCcccccccccccCCCCcccccccCCCCeeCCCC---CcCCCCCCCCCC---CCC
Confidence 457777888887773 25754 3599999998876 899999999998 863
No 163
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=21.02 E-value=64 Score=40.20 Aligned_cols=35 Identities=26% Similarity=0.726 Sum_probs=29.8
Q ss_pred CCCCCCCCCCCCeeeecCCceeeeCCCCCccCCCCCcc
Q psy5613 89 NPCVPGTCGEGAICDVVNHAVMCTCPPGTTGSPFIQCK 126 (1010)
Q Consensus 89 ~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~g~~~~~C~ 126 (1010)
++|.-+||.++++++...+...|.|++||.|.. |+
T Consensus 498 ~~c~C~PC~ngg~~~l~g~~C~C~C~~g~~G~~---Ce 532 (913)
T 3t5o_A 498 DPCQCAPCPNNGRPTLSGTECLCVCQSGTYGEN---CE 532 (913)
T ss_dssp CGGGSCCBTTTBEEEEETTEEEEECCTTBCSTT---SC
T ss_pred ccccCCCCCCCCEeecCCCceEEEccCCccccC---cc
Confidence 444445899999999888889999999999998 87
Done!