BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5614
(98 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WTS6|TEN3_MOUSE Teneurin-3 OS=Mus musculus GN=Tenm3 PE=1 SV=1
Length = 2715
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 24/93 (25%)
Query: 8 QCS-----MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCR---------- 52
QCS +Q + SC+C PN+ G P+C E + + +C S+ C+ CR
Sbjct: 651 QCSGHGTYLQESGSCTCDPNWTG--PDCSNE-ICSVDCGSHGVCMGGSCRCEEGWTGPAC 707
Query: 53 --DPCPGSCGYNAQCKVINHTPICTCPEGYIGD 83
C C + CK C C +G+ G+
Sbjct: 708 NQRACHPRCAEHGTCK----DGKCECSQGWNGE 736
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 18/85 (21%)
Query: 16 SCSCLPNYIGAPPN---CRPECV-----MNSECASNLACINEKC----------RDPCPG 57
SC C + G N C P C + +C + E C ++ CPG
Sbjct: 695 SCRCEEGWTGPACNQRACHPRCAEHGTCKDGKCECSQGWNGEHCTIAHYLDKIVKEGCPG 754
Query: 58 SCGYNAQCKVINHTPICTCPEGYIG 82
C N +C + + C C G+ G
Sbjct: 755 LCNSNGRCTLDQNGWHCVCQPGWRG 779
>sp|Q9P273|TEN3_HUMAN Teneurin-3 OS=Homo sapiens GN=TENM3 PE=2 SV=3
Length = 2699
Score = 37.4 bits (85), Expect = 0.029, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 24/93 (25%)
Query: 8 QCS-----MQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCR---------- 52
QCS +Q + SC+C PN+ G P+C E + + +C S+ C+ CR
Sbjct: 651 QCSGHGTYLQESGSCTCDPNWTG--PDCSNE-ICSVDCGSHGVCMGGTCRCEEGWTGPAC 707
Query: 53 --DPCPGSCGYNAQCKVINHTPICTCPEGYIGD 83
C C + CK C C +G+ G+
Sbjct: 708 NQRACHPRCAEHGTCK----DGKCECSQGWNGE 736
>sp|Q05546|TENR_RAT Tenascin-R OS=Rattus norvegicus GN=Tnr PE=1 SV=1
Length = 1356
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 22/91 (24%)
Query: 17 CSCLPNYIG-------APPNC--RPECVMNSECASNLACINEKCRD-PCPGSCGYNAQCK 66
C C Y G P +C R CV + EC E CR+ CPG C QC
Sbjct: 219 CICDSEYSGDDCSELRCPTDCSSRGLCV-DGECVCEEPYTGEDCRELRCPGDCSGKGQCA 277
Query: 67 VINHTPICTCPEGYIGDPFSSCFPKPPERKC 97
N T C C EGY G+ S +R+C
Sbjct: 278 --NGT--CLCQEGYAGEDCS-------QRRC 297
>sp|Q9W7R4|TEN3_DANRE Teneurin-3 OS=Danio rerio GN=tenm3 PE=2 SV=1
Length = 2590
Score = 33.1 bits (74), Expect = 0.46, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 16 SCSCLPNYIGAPPN---CRPECV-----MNSECASNLACINEKCR-DPCPGSCGYNAQCK 66
SC C + G+ + C P C + +C + E C + CPG C N +C
Sbjct: 585 SCRCEEGWTGSVCDLKACHPRCTEHGTCKDGKCECHQGWTGEHCTVEGCPGLCNSNGRCT 644
Query: 67 VINHTPICTCPEGYIG 82
+ + C C G+ G
Sbjct: 645 LDQNGWHCVCQPGWRG 660
>sp|Q9VYN8|TENA_DROME Teneurin-a OS=Drosophila melanogaster GN=Ten-a PE=1 SV=2
Length = 3004
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 19/78 (24%)
Query: 17 CSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRD------------PCPGSCGYNAQ 64
C C ++ G P+C + V + +C N C + KCR PC C + Q
Sbjct: 710 CVCERHWTG--PDCS-QAVCSLDCGRNGVCESGKCRCNSGWTGNLCDQLPCDSRCSEHGQ 766
Query: 65 CKVINHTPICTCPEGYIG 82
CK N T C C +G+ G
Sbjct: 767 CK--NGT--CVCSQGWNG 780
>sp|Q9W7R3|TEN4_DANRE Teneurin-4 OS=Danio rerio GN=tenm4 PE=2 SV=1
Length = 2824
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 16 SCSCLPNYIGA---PPNCRPEC-----VMNSECASNLACINEKCR-DPCPGSCGYNAQCK 66
SC C ++G C P C + +C + E C + CPG C N +C
Sbjct: 814 SCRCDEGWMGTGCEQRACHPRCSEHGTCKDGKCECSPGWNGEHCTIEGCPGLCNGNGRCT 873
Query: 67 VINHTPICTCPEGYIG 82
+ N+ C C G+ G
Sbjct: 874 LGNNGWYCVCQLGWRG 889
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 48 NEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIGD 83
+++ RDPC G ++ +C + +C C EGY GD
Sbjct: 1365 DQEARDPCLGHRCHHGKCVATGTSYMCKCAEGYGGD 1400
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 14/54 (25%)
Query: 29 NCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG 82
N P CV+ + CAS PCP +A C+ + T CTC GY G
Sbjct: 1939 NAEPGCVVTNACASG----------PCPP----HADCRDLWQTFSCTCQPGYYG 1978
>sp|Q9BY15|EMR3_HUMAN EGF-like module-containing mucin-like hormone receptor-like 3
OS=Homo sapiens GN=EMR3 PE=2 SV=2
Length = 652
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 32/89 (35%), Gaps = 19/89 (21%)
Query: 27 PPNCRPECVMNSECASN---------------LACINE--KCRDPCPGSCGYNAQCKVIN 69
PPN CV N+ C N L N+ +C P CG+NA C +
Sbjct: 32 PPNA--SCVNNTHCTCNHGYTSGSGQKLFTFPLETCNDINECTPPYSVYCGFNAVCYNVE 89
Query: 70 HTPICTCPEGYIGDPFSSCFPKPPERKCE 98
+ C C GY + F E C+
Sbjct: 90 GSFYCQCVPGYRLHSGNEQFSNSNENTCQ 118
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 14/54 (25%)
Query: 29 NCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG 82
N P C + + CAS PCP +A CK + T CTC GY G
Sbjct: 1928 NVEPGCTVTNPCASG----------PCPP----HADCKDLWQTFSCTCRPGYYG 1967
>sp|Q9NY15|STAB1_HUMAN Stabilin-1 OS=Homo sapiens GN=STAB1 PE=1 SV=3
Length = 2570
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 23/88 (26%)
Query: 8 QCSMQSNPSCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPC-PGSCGYNAQCK 66
QCS ++ PSC CLP Y CR +PC P C AQC
Sbjct: 209 QCSAEA-PSCRCLPGYTQQGSECRAP-------------------NPCWPSPCSLLAQCS 248
Query: 67 VI-NHTPICTCPEGYIGDPFSSCFPKPP 93
V C CPE Y GD C PK P
Sbjct: 249 VSPKGQAQCHCPENYHGDGM-VCLPKDP 275
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 33/89 (37%), Gaps = 26/89 (29%)
Query: 16 SCSCLPNYIGAPPNCRPECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVIN-HTPIC 74
+C+CLP+Y G +CR C D G C +A C +T C
Sbjct: 2116 TCTCLPDYEGDGWSCRAR---------------NPCTDGHRGGCSEHANCLSTGLNTRRC 2160
Query: 75 TCPEGYIGD----------PFSSCFPKPP 93
C GY+GD P C +PP
Sbjct: 2161 ECHAGYVGDGLQCLEESEPPVDRCLGQPP 2189
>sp|O88322|NID2_MOUSE Nidogen-2 OS=Mus musculus GN=Nid2 PE=1 SV=2
Length = 1403
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 30/84 (35%), Gaps = 22/84 (26%)
Query: 13 SNPSCSCLPNYIGAPPNCR--PECVMNSECASNLACINEKCRDPCPGSCGYNAQCKVINH 70
S+ SC+CLP +IG C EC N C C N PGS
Sbjct: 896 SSFSCACLPGFIGTGHQCSDVDECAEN-RCHEAAICYN------TPGSFS---------- 938
Query: 71 TPICTCPEGYIGDPFSSCFPKPPE 94
C C GY GD F PE
Sbjct: 939 ---CRCQPGYRGDGFHCTSDTVPE 959
>sp|Q14508|WFDC2_HUMAN WAP four-disulfide core domain protein 2 OS=Homo sapiens GN=WFDC2
PE=1 SV=2
Length = 124
Score = 29.3 bits (64), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 24 IGAPPNCRPECVMNSECASNLACINEKCRDPC 55
+ A NC ECV +SECA NL C + C C
Sbjct: 39 LQADQNCTQECVSDSECADNLKCCSAGCATFC 70
>sp|P34576|MUA3_CAEEL Transmembrane cell adhesion receptor mua-3 OS=Caenorhabditis elegans
GN=mua-3 PE=1 SV=2
Length = 3767
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 62 NAQCKVINHTPICTCPEGYIGDPFS 86
N C V N P C CPEG+ PF+
Sbjct: 1438 NEHCAVENGRPRCVCPEGFTRHPFT 1462
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 48 NEKCRDPCPGSCGYNAQCKVINHTPICTCPEGYIG 82
+++ RDPC G + C + +C C EGY G
Sbjct: 1365 DQEARDPCLGHSCRHGTCMATGDSYVCKCAEGYGG 1399
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.137 0.515
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,067,600
Number of Sequences: 539616
Number of extensions: 1822795
Number of successful extensions: 5330
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 304
Number of HSP's that attempted gapping in prelim test: 4160
Number of HSP's gapped (non-prelim): 1381
length of query: 98
length of database: 191,569,459
effective HSP length: 67
effective length of query: 31
effective length of database: 155,415,187
effective search space: 4817870797
effective search space used: 4817870797
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)