BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5622
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P25306|THD1_SOLLC Threonine dehydratase biosynthetic, chloroplastic OS=Solanum
lycopersicum GN=TD PE=1 SV=1
Length = 595
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 92/240 (38%), Positives = 124/240 (51%), Gaps = 17/240 (7%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
LS+ + ++K++ Q SFK RGA + LS ++ KGVI+AS GNHAQ + G
Sbjct: 121 LSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSREELDKGVITASAGNHAQGVALAGQ 180
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
RLN +VMP P +KI A R G V++ G EA+ AL+ + GL YI
Sbjct: 181 RLNCVAKIVMPTTTPQIKIDAVRALGGDVVLYGKTFDEAQTHALELSEKDGLKYIP---- 236
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAGQGT 208
+D P ++ GQGT+G EI Q+ +I A+ +PVGGGGLIAGVA I
Sbjct: 237 ------PFDDPGVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKI 290
Query: 209 VGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLIDKM 268
+ GVE AS + ++ G +S T ADG+AV LVG F LID M
Sbjct: 291 I-------GVEPYGAASMTLSLHEGHRVKLSNVDTFADGVAVALVGEYTFAKCQELIDGM 343
>sp|Q8NWQ4|TDCB_STAAW L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain MW2) GN=tdcB PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q6G9C4|TDCB_STAAS L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain MSSA476) GN=tdcB PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q6GGX0|TDCB_STAAR L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain MRSA252) GN=tdcB PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q5HFY5|TDCB_STAAC L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain COL) GN=tdcB PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q2FYJ3|TDCB_STAA8 L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain NCTC 8325) GN=tdcB PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q2FH01|TDCB_STAA3 L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain USA300) GN=tdcB PE=3 SV=1
Length = 346
Score = 126 bits (317), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/250 (34%), Positives = 130/250 (52%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q2YY67|TDCB_STAAB L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=tdcB PE=3 SV=2
Length = 346
Score = 125 bits (313), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK +FLK + Q TGSFK RGA + L+++QK+KG+I+AS GNHAQ +
Sbjct: 37 KSMYLSQSITKGNVFLKLENMQFTGSFKFRGASNKINHLTDEQKEKGIIAASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP AP K QA + YG VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPQAKQQATKGYGTKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+S+ + + T V T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQSENVHGMAESFYKRDLTEHRVDSTIADGCDVKVPGEQTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|P00927|THDH_YEAST Threonine dehydratase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ILV1 PE=1 SV=2
Length = 576
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 20/243 (8%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
LS + LK++ SFK RGA + L + Q+ +GVI+ S GNHAQ + +
Sbjct: 87 LSSRLNTNVILKREDLLPVFSFKLRGAYNMIAKLDDSQRNQGVIACSAGNHAQGVAFAAK 146
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
L IP T+VMP+ P +K Q R G+ V++ G D EAK K E GLT
Sbjct: 147 HLKIPATIVMPVCTPSIKYQNVSRLGSQVVLYGNDFDEAKAECAKLAEERGLT------- 199
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQV--AN-IDAIVVPVGGGGLIAGVAYDHPDIMAG 205
++ +DHP ++AGQGTV +EI+ QV AN I A+ VPVGGGGLIAG+ +
Sbjct: 200 ---NIPPFDHPYVIAGQGTVAMEILRQVRTANKIGAVFVPVGGGGLIAGIGAYLKRVAPH 256
Query: 206 QGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLI 265
+G+E D A+ +++ + TP+ V T ADG +V ++G F A ++
Sbjct: 257 IKIIGVETYD-------AATLHNSLQRNQRTPLPVVGTFADGTSVRMIGEETFRVAQQVV 309
Query: 266 DKM 268
D++
Sbjct: 310 DEV 312
>sp|P46493|ILVA_HAEIN L-threonine dehydratase biosynthetic IlvA OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ilvA PE=3
SV=1
Length = 513
Score = 123 bits (308), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 133/245 (54%), Gaps = 17/245 (6%)
Query: 24 SKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K LSE I++K++ Q SFK RGA + LS +QK GVI+AS GNHAQ +
Sbjct: 36 QKMGKLSERLHNNIWIKREDRQPVNSFKLRGAYAMISSLSAEQKAAGVIAASAGNHAQGV 95
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
+L + +VMP P +K+ A R +G V++ GA+ EAK A++ E +T+I
Sbjct: 96 ALSAKQLGLKALIVMPQNTPSIKVDAVRGFGGEVLLHGANFDEAKAKAIELSKEKNMTFI 155
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+DHP ++AGQGT+ +E++ QVA++D + V VGGGGL AGVA I+
Sbjct: 156 P----------PFDHPLVIAGQGTLAMEMLQQVADLDYVFVQVGGGGLAAGVA-----IL 200
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAP 263
Q ++I+ GVES A A+ G+PT ++ ADG+AV +G F
Sbjct: 201 LKQFMPEIKII--GVESKDSACLKAALDKGEPTDLTHIGLFADGVAVKRIGDETFRLCQQ 258
Query: 264 LIDKM 268
+D M
Sbjct: 259 YLDDM 263
>sp|Q7A5L8|TDCB_STAAN L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain N315) GN=tdcB PE=1 SV=1
Length = 346
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK ++LK + Q TGSFK RGA + LS++QK KG+I AS GNHAQ +
Sbjct: 37 KSMYLSQNITKGNVYLKLENMQFTGSFKFRGASNKINHLSDEQKAKGIIGASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP API K A + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPIAKQNATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+++ + + T T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQAENVHGMAESFYKRALTEHREDSTIADGCDVKVPGEKTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q99U50|TDCB_STAAM L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=tdcB PE=3 SV=1
Length = 346
Score = 121 bits (304), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 127/250 (50%), Gaps = 26/250 (10%)
Query: 25 KKSHLSE-LTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K +LS+ +TK ++LK + Q TGSFK RGA + LS++QK KG+I AS GNHAQ +
Sbjct: 37 KSMYLSQNITKGNVYLKLENMQFTGSFKFRGASNKINHLSDEQKAKGIIGASAGNHAQGV 96
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
L I T+VMP API K A + YGA VI++G + E + + E G+T +
Sbjct: 97 ALTAKLLGIDATIVMPETAPIAKQNATKGYGAKVILKGKNFNETRLYMEELAKENGMTIV 156
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPV----GGGGLIAGVAYDH 199
+ YD +MAGQGT+GLEI+D + N++ ++VPV G+ + +
Sbjct: 157 H----------PYDDKFVMAGQGTIGLEILDDIWNVNTVIVPVGGGGLIAGIATALKSFN 206
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
P I I+ GV+++ + + T T+ADG V + G +E
Sbjct: 207 PSI---------HII--GVQAENVHGMAESFYKRALTEHREDSTIADGCDVKVPGEKTYE 255
Query: 260 TAAPLIDKMF 269
L+D+
Sbjct: 256 VVKHLVDEFI 265
>sp|Q9CKJ2|ILVA_PASMU L-threonine dehydratase biosynthetic IlvA OS=Pasteurella multocida
(strain Pm70) GN=ilvA PE=3 SV=1
Length = 513
Score = 121 bits (303), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 128/238 (53%), Gaps = 17/238 (7%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
LSE ++F+K++ Q SFK RGA + LS +QK GVI+AS GNHAQ +
Sbjct: 39 LSERLGNKVFIKREDRQPVHSFKLRGAYAMIAGLSAEQKASGVIAASAGNHAQGVALSAK 98
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
L + +VMP P +K+ A R +G V++ GA+ EAK A++ +T+I
Sbjct: 99 HLGLRALIVMPQNTPSIKVDAVRGFGGEVLLHGANFDEAKAKAIELAESKNMTFIP---- 154
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAGQGT 208
+DHP ++AGQG++ +E++ Q + ID I VPVGGGGL AG+A ++ Q
Sbjct: 155 ------PFDHPAVIAGQGSIAMELLQQNSQIDRIFVPVGGGGLAAGIA-----VLIKQLM 203
Query: 209 VGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLID 266
++++ GVES A A+K GKP + ADG+AV +G F ID
Sbjct: 204 PEIKVI--GVESKDSACLYRALKAGKPIDLDRVGLFADGVAVKRIGDETFRVCQQYID 259
>sp|Q9GZT4|SRR_HUMAN Serine racemase OS=Homo sapiens GN=SRR PE=1 SV=1
Length = 340
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 133/247 (53%), Gaps = 22/247 (8%)
Query: 27 SHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSED---QKKKGVISASLGNHAQAM 83
S L++LT +F K + FQ TGSFK RGA A+ L D +K K V++ S GNH QA+
Sbjct: 32 SILNQLTGRNLFFKCELFQKTGSFKIRGALNAVRSLVPDALERKPKAVVTHSSGNHGQAL 91
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
Y IP +V+P AP K A + YGA+++ + +N+A + E
Sbjct: 92 TYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSDESRENVAKRVTEE------ 145
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+ G+ V P ++AGQGT+ LE+++QV +DA+VVPVGGGG++AG+A +
Sbjct: 146 ----TEGIMVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAI---TVK 198
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQP-TLADGLAVPLVGWNAFETAA 262
A + +V + + +D C + + +K GK P P T+ADG+ +G N +
Sbjct: 199 ALKPSVKVYAAEPS-NADDC--YQSKLK-GKLMPNLYPPETIADGVKSS-IGLNTWPIIR 253
Query: 263 PLIDKMF 269
L+D +F
Sbjct: 254 DLVDDIF 260
>sp|A0JNI4|SRR_BOVIN Serine racemase OS=Bos taurus GN=SRR PE=2 SV=1
Length = 334
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 134/247 (54%), Gaps = 22/247 (8%)
Query: 27 SHLSELTKMEIFLKKDFFQVTGSFKERGACYA---LLMLSEDQKKKGVISASLGNHAQAM 83
S L+++T +F K + FQ TGSFK RGA A L+ ++K + V++ S GNH QA+
Sbjct: 32 SILNQITGRNLFFKCELFQKTGSFKIRGALNAIRGLISAHPEEKPRAVVAHSSGNHGQAL 91
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
+ IP V++P AP K A + YGA+++ + +NI + E
Sbjct: 92 SFAARLEGIPAYVIVPETAPNCKKLAIQAYGASIVYSEQSEESRENITKRIAEE------ 145
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+ G+ V P ++AGQGT+ +E+++QV +DA+VVPVGGGG++AG+A +
Sbjct: 146 ----TEGIMVHPNQEPAVIAGQGTIAMEVLNQVPLVDALVVPVGGGGMLAGIAV---TVK 198
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQP-TLADGLAVPLVGWNAFETAA 262
A + +V + + + +D C + + +K G+ TP P T+ADG+ +G N +
Sbjct: 199 ALRPSVKV-YAAEPLNADDC--YQSKLK-GELTPNPYPPETIADGIKSS-IGLNTWPIIR 253
Query: 263 PLIDKMF 269
L+D +F
Sbjct: 254 DLVDDVF 260
>sp|Q2PGG3|SRR_ARATH Serine racemase OS=Arabidopsis thaliana GN=SR PE=1 SV=1
Length = 331
Score = 117 bits (293), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 83/224 (37%), Positives = 114/224 (50%), Gaps = 17/224 (7%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
L+ ++ +F K + Q G+FK RGAC A+L L +Q KGV++ S GNHA A+
Sbjct: 37 LNSISGRSLFFKCECLQKGGAFKFRGACNAVLSLDAEQAAKGVVTHSSGNHAAALSLAAK 96
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
IP +V+P AP K+ RYG VI A M + IA K E G I+
Sbjct: 97 IQGIPAYIVVPKGAPKCKVDNVIRYGGKVIWSEATMSSREEIASKVLQETGSVLIH---- 152
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAGQGT 208
Y+ I++GQGT+ LE+++Q+ IDAIVVP+ GGGLI+GVA I
Sbjct: 153 ------PYNDGRIISGQGTIALELLEQIQEIDAIVVPISGGGLISGVALAAKSIKPSIRI 206
Query: 209 VGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPL 252
+ E +G +D A A GK + V T+ADGL L
Sbjct: 207 IAAE--PKG--ADDAAQSKVA---GKIITLPVTNTIADGLRASL 243
>sp|Q39469|THD1_CICAR Threonine dehydratase biosynthetic, chloroplastic OS=Cicer
arietinum PE=2 SV=1
Length = 590
Score = 115 bits (289), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/243 (33%), Positives = 120/243 (49%), Gaps = 19/243 (7%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYH- 86
LS+ + ++K++ Q SFK RG + LS ++ KGVI+AS GNHAQ + +
Sbjct: 116 RLSDRLGVNFYVKREDRQRVFSFKLRGPYNMMSSLSHEEIDKGVITASAGNHAQGVPFPF 175
Query: 87 -GSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYING 145
G RL +VMP P +K+ R GA V++ G EAK A++ + GL
Sbjct: 176 PGRRLKCVAKIVMPTTTPNIKLDGVRALGADVVLWGHTFDEAKTHAVELCEKDGLR---- 231
Query: 146 YLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMAG 205
++ ++ P ++ GQGT+G EI Q+ IDA+ VPVGGGGLIAGVA I
Sbjct: 232 ------TIPPFEDPAVIKGQGTIGSEINRQIKRIDAVFVPVGGGGLIAGVAAFFKQIAPQ 285
Query: 206 QGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLI 265
+ +E D AS + ++ +S T ADG V ++G F ++
Sbjct: 286 TKIIVVEPYD-------AASMALSVHAEHRAKLSNVDTFADGATVAVIGEYTFARCQDVV 338
Query: 266 DKM 268
D M
Sbjct: 339 DAM 341
>sp|Q9ZSS6|THD1_ARATH Threonine dehydratase biosynthetic, chloroplastic OS=Arabidopsis
thaliana GN=OMR1 PE=1 SV=1
Length = 592
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 127/239 (53%), Gaps = 18/239 (7%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
LS+ + ++LK++ Q SFK RGA ++ L DQ KGVI +S GNHAQ + S
Sbjct: 119 LSKRLGVRMYLKREDLQPVFSFKLRGAYNMMVKLPADQLAKGVICSSAGNHAQGVALSAS 178
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
+L +VMP+ P +K QA GATV++ G +A+ A + E GLT+I
Sbjct: 179 KLGCTAVIVMPVTTPEIKWQAVENLGATVVLFGDSYDQAQAHAKIRAEEEGLTFIP---- 234
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQVAN-IDAIVVPVGGGGLIAGVAYDHPDIMAGQG 207
+DHPD++AGQGTVG+EI Q + AI VPVGGGGLIAG+A A
Sbjct: 235 ------PFDHPDVIAGQGTVGMEITRQAKGPLHAIFVPVGGGGLIAGIA-------AYVK 281
Query: 208 TVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLID 266
V E+ GVE + + ++ HG+ + ADG+AV VG F + L+D
Sbjct: 282 RVSPEVKIIGVEPADANAMALSLHHGERVILDQVGGFADGVAVKEVGEETFRISRNLMD 340
>sp|Q54HH2|SRR_DICDI Probable serine racemase OS=Dictyostelium discoideum GN=srr PE=3
SV=1
Length = 324
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 98/169 (57%), Gaps = 10/169 (5%)
Query: 27 SHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYH 86
S ++EL E++ K + Q TGSFK RGAC A+ L E++ KGV++ S GNH QA+ Y
Sbjct: 32 STINELAGKELYFKCENLQKTGSFKMRGACNAIFSLDEEELSKGVVTHSSGNHGQALSYA 91
Query: 87 GSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGY 146
+ VV+P AP +K+ A YGATV A + EA+ K+ E
Sbjct: 92 SKVRCVKCYVVVPEDAPSVKLNAICGYGATVTKCKATL-EARESNTKQLIE--------- 141
Query: 147 LSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGV 195
S + +D+ ++AGQGT LE+++QV N+DAI+ PVGGGGL++G
Sbjct: 142 QHSCKLIHPFDNLQVIAGQGTASLELMEQVENLDAIITPVGGGGLLSGT 190
>sp|P04968|ILVA_ECOLI L-threonine dehydratase biosynthetic IlvA OS=Escherichia coli
(strain K12) GN=ilvA PE=1 SV=1
Length = 514
Score = 113 bits (283), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 127/245 (51%), Gaps = 17/245 (6%)
Query: 24 SKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K LS I +K++ Q SFK RGA + L+E+QK GVI+AS GNHAQ +
Sbjct: 35 QKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGV 94
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
+ +RL + +VMP +K+ A R +G V++ GA+ EAK A++ + G T+
Sbjct: 95 AFSSARLGVKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTW- 153
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
V +DHP ++AGQGT+ LE++ Q A++D + VPVGGGGL AGVA +M
Sbjct: 154 ---------VPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLM 204
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAP 263
+I VE++ A A+ G P + A+G+AV +G F
Sbjct: 205 P-------QIKVIAVEAEDSACLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQE 257
Query: 264 LIDKM 268
+D +
Sbjct: 258 YLDDI 262
>sp|P36007|SRY1_YEAST Threo-3-hydroxyaspartate ammonia-lyase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRY1 PE=1 SV=1
Length = 326
Score = 112 bits (280), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 10/157 (6%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
L++ +I+ K + FQ G+FK RGA A+ LS++++ KGVI+ S GNHAQA+
Sbjct: 31 LNDRLGAQIYFKGENFQRVGAFKFRGAMNAVSKLSDEKRSKGVIAFSSGNHAQAIALSAK 90
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
LN+P T+VMP AP +K+ A YGA +I ++ + I + AE G I
Sbjct: 91 LLNVPATIVMPEDAPALKVAATAGYGAHIIRYNRYTEDREQIGRQLAAEHGFALIP---- 146
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVP 185
YDHPD++AGQGT E++++V +DA+ VP
Sbjct: 147 ------PYDHPDVIAGQGTSAKELLEEVGQLDALFVP 177
>sp|P20506|ILVA_SALTY L-Threonine dehydratase biosynthetic IlvA OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ilvA PE=3 SV=3
Length = 514
Score = 111 bits (278), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 132/251 (52%), Gaps = 26/251 (10%)
Query: 27 SHLSELTKME---------IFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLG 77
+ ++ L KME I +K++ Q SFK RGA + L+E+QK GVI+AS G
Sbjct: 29 AQVTPLQKMEKLSSRLDNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAG 88
Query: 78 NHAQAMCYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAE 137
NHAQ + + +RL + +VMP +K+ A R +G V++ GA+ EAK A++ +
Sbjct: 89 NHAQGVAFSSARLGVKSLIVMPKATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELAQQ 148
Query: 138 LGLTYINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAY 197
G T++ +DHP ++AGQGT+ LE++ Q +++D + VPVGGGGL AGVA
Sbjct: 149 QGFTWVP----------PFDHPMVIAGQGTLALELLQQDSHLDRVFVPVGGGGLAAGVAV 198
Query: 198 DHPDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNA 257
+M +I VE++ A A++ G P + A+G+AV +G
Sbjct: 199 LIKQLMP-------QIKVIAVEAEDSACLKAALEAGHPVDLPRVGLFAEGVAVKRIGDET 251
Query: 258 FETAAPLIDKM 268
F +D +
Sbjct: 252 FRLCQEYLDDI 262
>sp|P55664|Y4TJ_RHISN Putative threonine dehydratase OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01490 PE=3 SV=1
Length = 332
Score = 110 bits (275), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 121/246 (49%), Gaps = 31/246 (12%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
L+ELT ++ LK + +Q TGSFK RGA A+L LS + +GVI+AS GNH +A+ Y
Sbjct: 34 LTELTGTQVSLKLEHYQRTGSFKLRGATNAILQLSPSDRARGVIAASTGNHGRALSYAAK 93
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
+ T+ M + P K+ R+ GATV + G+ +A+ + AE GL+ I
Sbjct: 94 AVGSRATICMSDLVPENKVSEIRKLGATVRIVGSSQDDAQVEVERLVAEEGLSMIP---- 149
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVG------GGGLIAGVAYDHPDI 202
+DHP I+AGQ TVGLEIV+ + ++ +++P+ G H I
Sbjct: 150 ------PFDHPHIIAGQRTVGLEIVEAMPDVAMVLLPLSGGGLAAGVAAAVKALRPHARI 203
Query: 203 MAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNA--FET 260
+ GV DR A+ +I+ G P V +LAD L + NA F+
Sbjct: 204 I-------------GVTMDRGAAMKASIEAGHPVQVKEYRSLADSLGGGIGMANAWTFQM 250
Query: 261 AAPLID 266
L+D
Sbjct: 251 CRALLD 256
>sp|O42615|THDH_BLAAD Threonine dehydratase, mitochondrial OS=Blastobotrys adeninivorans
GN=ILV1 PE=3 SV=1
Length = 550
Score = 108 bits (270), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 128/243 (52%), Gaps = 19/243 (7%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS IFLK++ Q SFK RGA + L ++ + KGVI+ S GNHAQ + Y
Sbjct: 63 NLSSKLGANIFLKREDLQPVFSFKLRGAYNMMAHLPQETRWKGVIACSAGNHAQGVAYSA 122
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYL 147
LNIP T+VMP+V P +K + R GA V++ G D AK + + GLT
Sbjct: 123 KHLNIPATIVMPVVTPAIKYKNVDRLGAKVVLHGNDFDAAKAECNRLSEKHGLT------ 176
Query: 148 SSGLSVLGYDHPDIMAGQGTVGLEIVDQ--VANIDAIVVPVGGGGLIAGVAYDHPDIMAG 205
++ +D+P ++AGQGT+G+E++ Q V ++ AI V +GGGGLIAGV I
Sbjct: 177 ----NIPLFDNPYVIAGQGTIGVELLRQIDVESLKAIFVCIGGGGLIAGVGAYIKRIAPQ 232
Query: 206 QGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLI 265
+G+E D + +++ G+ +S ADG AV ++G F ++
Sbjct: 233 VKIIGVETYDAN-------AMRQSLQKGERITLSEVGLFADGAAVKILGEETFRLCQQVV 285
Query: 266 DKM 268
D++
Sbjct: 286 DEI 288
>sp|P11954|TDCB_SALTY L-threonine dehydratase catabolic TdcB OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=tdcB PE=1 SV=2
Length = 329
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 129/244 (52%), Gaps = 17/244 (6%)
Query: 25 KKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMC 84
+ ++ SE K EIFLK + Q TGSFK RGA L L+E +K+KGV++ S GNHAQ +
Sbjct: 32 RSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTEAEKRKGVVACSAGNHAQGVS 91
Query: 85 YHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYIN 144
+ L I VVMP AP K+ A Y A V++ G + N + K +E+ T
Sbjct: 92 LSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNF----NDTIAKVSEIVET--- 144
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMA 204
+ + YD P ++AGQGT+GLEI++ + ++D ++VP+GGGGLIAG+A I
Sbjct: 145 ---EGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINP 201
Query: 205 GQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPL 264
+ GV+++ + + G+ T TLADG V G +E L
Sbjct: 202 TIKVI-------GVQAENVHGMAASYYTGEITTHRTTGTLADGCDVSRPGNLTYEIVREL 254
Query: 265 IDKM 268
+D +
Sbjct: 255 VDDI 258
>sp|P0AGF9|TDCB_SHIFL L-threonine dehydratase catabolic TdcB OS=Shigella flexneri GN=tdcB
PE=3 SV=1
Length = 329
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 25 KKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMC 84
+ ++ SE K EIFLK + Q TGSFK RGA L L++ +K+KGV++ S GNHAQ +
Sbjct: 32 RSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVS 91
Query: 85 YHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYIN 144
+ L I VVMP AP K+ A Y A V++ G + N + K +E+
Sbjct: 92 LSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNF----NDTIAKVSEI------ 141
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMA 204
+ + + YD P ++AGQGT+GLEI++ + ++D ++VP+GGGGLIAG+A
Sbjct: 142 VEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIA-------V 194
Query: 205 GQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPL 264
++ I GV+S+ + + G+ T TLADG V G +E L
Sbjct: 195 AIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVREL 254
Query: 265 IDKM 268
+D +
Sbjct: 255 VDDI 258
>sp|P0AGF6|TDCB_ECOLI L-threonine dehydratase catabolic TdcB OS=Escherichia coli (strain
K12) GN=tdcB PE=1 SV=1
Length = 329
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 25 KKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMC 84
+ ++ SE K EIFLK + Q TGSFK RGA L L++ +K+KGV++ S GNHAQ +
Sbjct: 32 RSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVS 91
Query: 85 YHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYIN 144
+ L I VVMP AP K+ A Y A V++ G + N + K +E+
Sbjct: 92 LSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNF----NDTIAKVSEI------ 141
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMA 204
+ + + YD P ++AGQGT+GLEI++ + ++D ++VP+GGGGLIAG+A
Sbjct: 142 VEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIA-------V 194
Query: 205 GQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPL 264
++ I GV+S+ + + G+ T TLADG V G +E L
Sbjct: 195 AIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVREL 254
Query: 265 IDKM 268
+D +
Sbjct: 255 VDDI 258
>sp|P0AGF7|TDCB_ECOL6 L-threonine dehydratase catabolic TdcB OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=tdcB PE=3 SV=1
Length = 329
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 25 KKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMC 84
+ ++ SE K EIFLK + Q TGSFK RGA L L++ +K+KGV++ S GNHAQ +
Sbjct: 32 RSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVS 91
Query: 85 YHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYIN 144
+ L I VVMP AP K+ A Y A V++ G + N + K +E+
Sbjct: 92 LSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNF----NDTIAKVSEI------ 141
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMA 204
+ + + YD P ++AGQGT+GLEI++ + ++D ++VP+GGGGLIAG+A
Sbjct: 142 VEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIA-------V 194
Query: 205 GQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPL 264
++ I GV+S+ + + G+ T TLADG V G +E L
Sbjct: 195 AIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVREL 254
Query: 265 IDKM 268
+D +
Sbjct: 255 VDDI 258
>sp|P0AGF8|TDCB_ECO57 L-threonine dehydratase catabolic TdcB OS=Escherichia coli O157:H7
GN=tdcB PE=3 SV=1
Length = 329
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 130/244 (53%), Gaps = 17/244 (6%)
Query: 25 KKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMC 84
+ ++ SE K EIFLK + Q TGSFK RGA L L++ +K+KGV++ S GNHAQ +
Sbjct: 32 RSNYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVS 91
Query: 85 YHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYIN 144
+ L I VVMP AP K+ A Y A V++ G + N + K +E+
Sbjct: 92 LSCAMLGIDGKVVMPKGAPKSKVAATCDYSAEVVLHGDNF----NDTIAKVSEI------ 141
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMA 204
+ + + YD P ++AGQGT+GLEI++ + ++D ++VP+GGGGLIAG+A
Sbjct: 142 VEMEGRIFIPPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIA-------V 194
Query: 205 GQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPL 264
++ I GV+S+ + + G+ T TLADG V G +E L
Sbjct: 195 AIKSINPTIRVIGVQSENVHGMAASFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVREL 254
Query: 265 IDKM 268
+D +
Sbjct: 255 VDDI 258
>sp|Q10725|FSDH_BURPI Phenylserine dehydratase OS=Burkholderia pickettii GN=psdht PE=1
SV=3
Length = 326
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 122/256 (47%), Gaps = 28/256 (10%)
Query: 20 QWFNSK----KSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISAS 75
QW + K+ + + K + Q +G+FK RGA LL L +DQ+ GV S
Sbjct: 24 QWVRTTPVFDKTDFEPVPGTAVNFKLELLQASGTFKARGAFSNLLALDDDQRAAGVTCVS 83
Query: 76 LGNHAQAMCYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKG 135
GNHA + Y RL IP VVM A ++ CR+YGA V++ + + A + +
Sbjct: 84 AGNHAVGVAYAAMRLGIPAKVVMIKTASPARVALCRQYGAEVVL-AENGQTAFDTVHRIE 142
Query: 136 AELGLTYI---NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLI 192
+E G ++ NGY + + G T+G E ++Q +DA++VP+GGGGL+
Sbjct: 143 SEEGRFFVHPFNGYRT-------------VLGTATLGHEWLEQAGALDAVIVPIGGGGLM 189
Query: 193 AGVAYDHPDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPL 252
AGV+ ++A Q V GVE + + + + G P + ++AD L P
Sbjct: 190 AGVS-TAVKLLAPQCQV------IGVEPEGADAMHRSFETGGPVKMGSMQSIADSLMAPH 242
Query: 253 VGWNAFETAAPLIDKM 268
++E +D++
Sbjct: 243 TEQYSYELCRRNVDRL 258
>sp|Q7XSN8|SRR_ORYSJ Serine racemase OS=Oryza sativa subsp. japonica GN=SERR PE=1 SV=2
Length = 339
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 10/161 (6%)
Query: 36 EIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRLNIPVT 95
++F K + FQ G+FK RGA ++ L +D+ KGV++ S GNHA A+ IP
Sbjct: 53 QLFFKCECFQKAGAFKIRGASNSIFALDDDEASKGVVTHSSGNHAAAVALAAKLRGIPAY 112
Query: 96 VVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSGLSVLG 155
+V+P AP K+ +RYG +I ++ +++A + E G ++
Sbjct: 113 IVIPRNAPACKVDNVKRYGGHIIWSDVSIESRESVAKRVQEETGAILVH----------P 162
Query: 156 YDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVA 196
+++ + ++GQGTV LE++++V ID I+VP+ GGGLI+GVA
Sbjct: 163 FNNKNTISGQGTVSLELLEEVPEIDTIIVPISGGGLISGVA 203
>sp|A2XWA9|SRR_ORYSI Serine racemase OS=Oryza sativa subsp. indica GN=OsI_16936 PE=3
SV=1
Length = 339
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 93/161 (57%), Gaps = 10/161 (6%)
Query: 36 EIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRLNIPVT 95
++F K + FQ G+FK RGA ++ L +D+ KGV++ S GNHA A+ IP
Sbjct: 53 QLFFKCECFQKAGAFKIRGASNSIFALDDDEASKGVVTHSSGNHAAAVALAAKLRGIPAY 112
Query: 96 VVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSGLSVLG 155
+V+P AP K+ +RYG +I ++ +++A + E G ++
Sbjct: 113 IVIPRNAPACKVDNVKRYGGHIIWSDVSIESRESVAKRVQEETGAILVH----------P 162
Query: 156 YDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVA 196
+++ + ++GQGTV LE++++V ID I+VP+ GGGLI+GVA
Sbjct: 163 FNNKNTISGQGTVSLELLEEVPEIDTIIVPISGGGLISGVA 203
>sp|O59791|SRR_SCHPO Serine racemase OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SRR PE=1 SV=1
Length = 323
Score = 102 bits (253), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 36 EIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRLNIPVT 95
E+F K + FQ G+FK RGA AL L+E Q+K GV++ S GNHAQA+ L IP
Sbjct: 42 EVFFKCENFQKMGAFKFRGALNALSQLNEAQRKAGVLTFSSGNHAQAIALSAKILGIPAK 101
Query: 96 VVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSGLSVLG 155
++MP+ AP K+ A + YG VI+ + + +A + GLT I
Sbjct: 102 IIMPLDAPEAKVAATKGYGGQVIMYDRYKDDREKMAKEISEREGLTIIP----------P 151
Query: 156 YDHPDIMAGQGTVGLEIVDQVANIDAIVV 184
YDHP ++AGQGT E+ ++V +DA+ V
Sbjct: 152 YDHPHVLAGQGTAAKELFEEVGPLDALFV 180
>sp|P53607|ILVA_BURM1 L-threonine dehydratase biosynthetic IlvA OS=Burkholderia
multivorans (strain ATCC 17616 / 249) GN=ilvA PE=3 SV=1
Length = 507
Score = 99.0 bits (245), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 125/243 (51%), Gaps = 21/243 (8%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS + ++LK++ Q SFK RGA + + D +GVI+AS GNHAQ + +
Sbjct: 29 NLSARLRNPVYLKREDNQPVFSFKLRGAYNKMAHIPADALARGVITASAGNHAQGVAFSA 88
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRY---GATVIVEGADMKEAKNIALKKGAELGLTYIN 144
+R+ + +V+P+ P +K+ A R + G VI G +A ALK E GLT+++
Sbjct: 89 ARMGVKAVIVVPVTTPQVKVDAVRAHGGPGVEVIQAGESYSDAYAHALKVQEERGLTFVH 148
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQ-VANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+D P ++AGQGT+ +EI+ Q I AI VP+GGGGL AGV
Sbjct: 149 ----------PFDDPYVIAGQGTIAMEILRQHQGPIHAIFVPIGGGGLAAGV-------A 191
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAP 263
A V EI GV+++ + + +++ GK ++ ADG AV LVG F
Sbjct: 192 AYVKAVRPEIKVIGVQAEDSCAMAQSLQAGKRVELAEVGLFADGTAVKLVGEETFRLCKE 251
Query: 264 LID 266
+D
Sbjct: 252 YLD 254
>sp|O94634|THDH_SCHPO Threonine dehydratase, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC1677.03c PE=3 SV=1
Length = 600
Score = 98.6 bits (244), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/240 (34%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 29 LSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHGS 88
+SE T + ++LK++ SFK RGA + L + K GVI+ S GNHAQ + Y
Sbjct: 122 ISESTGVPVYLKREDLTPVFSFKIRGAHNKMASLDKQSLKNGVIACSAGNHAQGVAYSAR 181
Query: 89 RLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLS 148
L + T+VMP P +K + +R GA V++ GA+ AK + E L I+
Sbjct: 182 TLGVKATIVMPQNTPEIKWRNVKRLGANVLLHGANFDIAKAECARLAKEQNLEVIH---- 237
Query: 149 SGLSVLGYDHPDIMAGQGTVGLEIVDQV--ANIDAIVVPVGGGGLIAGVAYDHPDIMAGQ 206
+D P ++AGQGT+GLEI+ Q+ +DAI VGGGGLIAG+A I
Sbjct: 238 ------PFDDPYVIAGQGTIGLEILHQIDLRKLDAIYCAVGGGGLIAGIATYVKRIAPHV 291
Query: 207 GTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAPLID 266
+G+E D + ++K K + ADG AV LVG F + ID
Sbjct: 292 KVIGVETFD-------ADALKKSLKDKKRVTLKEVGLFADGTAVKLVGEETFRLVSKNID 344
>sp|Q02145|ILVA_LACLA L-threonine dehydratase biosynthetic IlvA OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ilvA PE=3 SV=3
Length = 416
Score = 97.8 bits (242), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 117/240 (48%), Gaps = 26/240 (10%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS + I+LK++ Q SFK RGA Y++ LS++Q+ KGV+ AS GNHAQ + +
Sbjct: 28 YLSNKYQANIYLKEENLQKVRSFKLRGAYYSISKLSDEQRSKGVVCASAGNHAQGVAFAA 87
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYG---ATVIVEGADMKEAKNIALKKGAELGLTYIN 144
++LNI T+ MP+ P KI + +G T+ + G E+ A + +I+
Sbjct: 88 NQLNISATIFMPVTTPNQKISQVKFFGESHVTIRLIGDTFDESARAAKAFSQDNDKPFID 147
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVA----NIDAIVVP-VGGGGLIAGVAYDH 199
+D +++AGQGTV LEI Q ++D I V GGG + AY
Sbjct: 148 ----------PFDDENVIAGQGTVALEIFAQAKKQGISLDKIFVQIGGGGLIAGITAY-- 195
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
+ + EI+ GVE+ S A G+P + ADG+AV VG ++
Sbjct: 196 ----SKERYPQTEII--GVEAKGATSMKAAYSAGQPVTLEHIDKFADGIAVATVGQKTYQ 249
>sp|Q8CNK9|ILVA_STAES L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ilvA PE=3 SV=2
Length = 422
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 27/248 (10%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ ++LK++ Q SFK RGA A+ +LS ++K KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYNCNVYLKREDLQWVRSFKLRGAYNAISVLSNEEKNKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGAT---VIVEGADMKEAKNIALKKGAELGLTYIN 144
+LN+ + MP+ P KI + +G + +++ G AL + + +I+
Sbjct: 93 KKLNLKAVIFMPVTTPRQKINQVKFFGDSNVEIVLIGDTFDHCLAQALNYTKQHKMNFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVA----NIDAIVVPVGGGGLIAGVAYDHP 200
+++ +AGQGT+ EI++Q D + +GGGGLI+GV+
Sbjct: 153 ----------PFNNVYTIAGQGTLAKEILNQAEKEDKTFDYVFAAIGGGGLISGVS---- 198
Query: 201 DIMAGQGTVGLEIVDQGVESDRCASF--STAIKHGKPTPVSVQPTLADGLAVPLVGWNAF 258
+ +I+ GVE +S S I H T ++ DG +V VG F
Sbjct: 199 -TYFKAHSPHTKII--GVEPTGASSMYQSVVINHSIVTLENIDK-FVDGASVARVGDITF 254
Query: 259 ETAAPLID 266
+ A +D
Sbjct: 255 DIAKDKVD 262
>sp|Q5HMF5|ILVA_STAEQ L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ilvA PE=3
SV=1
Length = 422
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 27/248 (10%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ ++LK++ Q SFK RGA A+ +LS ++K KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYNCNVYLKREDLQWVRSFKLRGAYNAISVLSNEEKNKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGAT---VIVEGADMKEAKNIALKKGAELGLTYIN 144
+LN+ + MP+ P KI + +G + +++ G AL + + +I+
Sbjct: 93 KKLNLKAVIFMPVTTPRQKINQVKFFGDSNVEIVLIGDTFDHCLAQALNYTKQHKMNFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVA----NIDAIVVPVGGGGLIAGVAYDHP 200
+++ +AGQGT+ EI++Q D + +GGGGLI+GV+
Sbjct: 153 ----------PFNNVYTIAGQGTLAKEILNQAEKEDKTFDYVFAAIGGGGLISGVS---- 198
Query: 201 DIMAGQGTVGLEIVDQGVESDRCASF--STAIKHGKPTPVSVQPTLADGLAVPLVGWNAF 258
+ +I+ GVE +S S I H T ++ DG +V VG F
Sbjct: 199 -TYFKAHSPHTKII--GVEPTGASSMYQSVVINHSIVTLENIDK-FVDGASVARVGDITF 254
Query: 259 ETAAPLID 266
+ A +D
Sbjct: 255 DIAKDKVD 262
>sp|Q76EQ0|SRR_RAT Serine racemase OS=Rattus norvegicus GN=Srr PE=1 SV=1
Length = 333
Score = 88.6 bits (218), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 128/247 (51%), Gaps = 22/247 (8%)
Query: 27 SHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQ---KKKGVISASLGNHAQAM 83
S L+++ +F K + FQ TGSFK RGA A+ L D K K V++ S GNH QA+
Sbjct: 32 SILNQIAGRNLFFKCELFQKTGSFKIRGALNAIRGLIPDTLEGKPKAVVTHSSGNHGQAL 91
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
Y IP +V+P AP K A + YGA+++ + +N+A + E
Sbjct: 92 TYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYSEPSDESRENVAQRIIQE------ 145
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+ G+ V P ++AGQGT+ LE+++QV +DA+VVPVGGGG++AG+A +
Sbjct: 146 ----TEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAITIKTLK 201
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQP-TLADGLAVPLVGWNAFETAA 262
E + +D C + + +K G+ TP P T+ADG+ +G N +
Sbjct: 202 PSVKVYAAEPSN----ADDC--YQSKLK-GELTPNLHPPETIADGVKSS-IGLNTWPIIR 253
Query: 263 PLIDKMF 269
L+D +F
Sbjct: 254 DLVDDVF 260
>sp|Q9KC63|ILVA_BACHD L-threonine dehydratase biosynthetic IlvA OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=ilvA PE=3 SV=1
Length = 415
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 119/249 (47%), Gaps = 21/249 (8%)
Query: 24 SKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
K LSE + ++LK++ QV SFK RGA + + + +++ GV+ AS GNHAQ +
Sbjct: 26 QKNQVLSERYECNVYLKREDMQVVRSFKIRGAFHQISSIPKEELNNGVVCASAGNHAQGV 85
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYG---ATVIVEGADMKEAKNIALKKGAELGL 140
Y L IP + MP P K+ + +G VI+ G ++ N A + G + +
Sbjct: 86 AYSCHTLQIPGKIFMPTTTPRQKVDQVKFFGKEYVEVILTGDTFDDSFNEAKEYGIKHKM 145
Query: 141 TYINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQV-ANIDAIVVPVGGGGLIAGVAYDH 199
T+I+ +D I+AGQGTVG+EI++ + NID + +GGGGLI+GV
Sbjct: 146 TFIH----------PFDQEKIVAGQGTVGMEIMNDIDDNIDYLFCSIGGGGLISGVGTYI 195
Query: 200 PDIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFE 259
I +G E + ++K GK + DG AV VG FE
Sbjct: 196 KSISPRTKVIGCEPAG-------APAMKESLKQGKVIELEKIDKFVDGAAVKKVGEIPFE 248
Query: 260 TAAPLIDKM 268
+++ +
Sbjct: 249 ICQKILEDI 257
>sp|P25379|STDH_YEAST Catabolic L-serine/threonine dehydratase OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CHA1 PE=1
SV=2
Length = 360
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 109/240 (45%), Gaps = 25/240 (10%)
Query: 36 EIFLKKDFFQVTGSFKERG-----ACYALLMLSEDQKKKGVISASLGNHAQAMCYHGSRL 90
+ FLK + Q +GSFK RG A+ + + ++ V ++S GN A RL
Sbjct: 22 QFFLKYECLQPSGSFKSRGIGNLIMKSAIRIQKDGKRSPQVFASSGGNAGFAAATACQRL 81
Query: 91 NIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYINGYLSSG 150
++P TVV+P + R GA VIV GA KEA LK + I+ +
Sbjct: 82 SLPCTVVVPTATKKRMVDKIRNTGAQVIVSGAYWKEADTF-LKTNV---MNKIDSQVIEP 137
Query: 151 LSVLGYDHPDIMAGQGTVGLEIVD-------QVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+ V +D+PDI G ++ EIV V + IV VGGGGL G I+
Sbjct: 138 IYVHPFDNPDIWEGHSSMIDEIVQDLKSQHISVNKVKGIVCSVGGGGLYNG-------II 190
Query: 204 AGQGTVGL--EIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETA 261
G GL I GVE++ C F+T++K G+P ++A L ++ FE A
Sbjct: 191 QGLERYGLADRIPIVGVETNGCHVFNTSLKIGQPVQFKKITSIATSLGTAVISNQTFEYA 250
>sp|Q9QZX7|SRR_MOUSE Serine racemase OS=Mus musculus GN=Srr PE=1 SV=1
Length = 339
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 131/247 (53%), Gaps = 22/247 (8%)
Query: 27 SHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSED---QKKKGVISASLGNHAQAM 83
S L+++ +F K + FQ TGSFK RGA A+ L D +K K V++ S GNH QA+
Sbjct: 32 SILNQIAGRNLFFKCELFQKTGSFKIRGALNAIRGLIPDTPEEKPKAVVTHSSGNHGQAL 91
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGATVIVEGADMKEAKNIALKKGAELGLTYI 143
Y IP +V+P AP K A + YGA+++ + + + + E
Sbjct: 92 TYAAKLEGIPAYIVVPQTAPNCKKLAIQAYGASIVYCDPSDESREKVTQRIMQE------ 145
Query: 144 NGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIM 203
+ G+ V P ++AGQGT+ LE+++QV +DA+VVPVGGGG++AG+A I
Sbjct: 146 ----TEGILVHPNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMVAGIAI---TIK 198
Query: 204 AGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQP-TLADGLAVPLVGWNAFETAA 262
A + +V + + +D C + + +K G+ TP P T+ADG+ +G N +
Sbjct: 199 ALKPSVKVYAAEPS-NADDC--YQSKLK-GELTPNLHPPETIADGVKSS-IGLNTWPIIR 253
Query: 263 PLIDKMF 269
L+D +F
Sbjct: 254 DLVDDVF 260
>sp|Q4L7U4|ILVA_STAHJ L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ilvA PE=3 SV=1
Length = 422
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 114/243 (46%), Gaps = 17/243 (6%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ ++LK++ Q SFK RGA A+ +L+ + K+KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYDCNVYLKREDLQWVRSFKLRGAYNAISVLTSEAKEKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGA---TVIVEGADMKEAKNIALKKGAELGLTYIN 144
LN+ + MP+ P+ K+ + +G+ +I+ G + AL + +T+I+
Sbjct: 93 KALNLKAVIFMPVTTPLQKVNQVKFFGSKNVKIILTGDTFDDCLKEALIYTEQNHMTFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANIDAIVVPVGGGGLIAGVAYDHPDIMA 204
+++ D +AGQGT+ EI++Q +N D+I + G
Sbjct: 153 ----------PFNNVDTIAGQGTLAKEILNQSSN-DSITFDYLFAAIGGGGLISGISTYM 201
Query: 205 GQGTVGLEIVDQGVESDRCAS-FSTAIKHGKPTPVSVQPTLADGLAVPLVGWNAFETAAP 263
Q + +I+ GVE +S + + + K + DG +V VG ++ A
Sbjct: 202 NQYSPQTKII--GVEPSGASSMYESVVVQNKIVTLDHIDKFVDGASVARVGDITYDIAKK 259
Query: 264 LID 266
+D
Sbjct: 260 FVD 262
>sp|P37946|ILVA_BACSU L-threonine dehydratase biosynthetic IlvA OS=Bacillus subtilis
(strain 168) GN=ilvA PE=3 SV=1
Length = 422
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 24 SKKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAM 83
+ LSE + I+LK++ QV SFK RGA + + LS +Q + GV+ AS GNHAQ +
Sbjct: 33 QRNDRLSERYECNIYLKREDLQVVRSFKLRGAYHKMKQLSSEQTENGVVCASAGNHAQGV 92
Query: 84 CYHGSRLNIPVTVVMPIVAPIMKIQACRRYGA---TVIVEGADMKEAKNIALKKGAELGL 140
+ L I + MP P K+ +G +I+ G + A +
Sbjct: 93 AFSCKHLGIHGKIFMPSTTPRQKVSQVELFGKGFIDIILTGDTFDDVYKSAAECCEAESR 152
Query: 141 TYINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQV 176
T+I+ +D PD+MAGQGT+ +EI++ +
Sbjct: 153 TFIH----------PFDDPDVMAGQGTLAVEILNDI 178
>sp|Q49Z16|ILVA_STAS1 L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=ilvA PE=3 SV=1
Length = 422
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 82/159 (51%), Gaps = 13/159 (8%)
Query: 25 KKSHLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMC 84
K +LS+ +++LK++ Q SFK RGA A++ L E ++ G+ AS GNHAQ +
Sbjct: 30 KDHYLSQKYDCKVYLKREDLQWVRSFKLRGAYNAIIALDEADRQNGITCASAGNHAQGVA 89
Query: 85 YHGSRLNIPVTVVMPIVAPIMKIQACRRYG---ATVIVEGADMKEAKNIALKKGAELGLT 141
Y S+LN+ + MP+ P+ KI + +G V++ G + AL E +
Sbjct: 90 YTASKLNLNAVIFMPVTTPLQKINQVKFFGGDNTEVVLTGDTFDDCLKEALVYTEENKMN 149
Query: 142 YINGYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANID 180
+I+ +++ +AGQGT+ EI++Q + D
Sbjct: 150 FID----------PFNNIYTIAGQGTLAKEILEQSKDND 178
>sp|Q04513|ILVA_CORGL L-threonine dehydratase biosynthetic IlvA OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=ilvA PE=3 SV=2
Length = 436
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 24/234 (10%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
LSE T EI+LK++ Q S+K RGA + L+++Q+ G+++AS GNHAQ + Y
Sbjct: 47 RLSEETGAEIYLKREDLQDVRSYKIRGALNSGAQLTQEQRDAGIVAASAGNHAQGVAYVC 106
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGA---TVIVEGADMKEAKNIALKKGAELGLTYIN 144
L + + +P+ P K +G +++V G + EA A + G T I
Sbjct: 107 KSLGVQGRIYVPVQTPKQKRDRIMVHGGEFVSLVVTGNNFDEASAAAHEDAERTGATLIE 166
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQVANI----DAIVVPVGGGGLIAGVAYDHP 200
+D + + GQGTV EI+ Q+ ++ D ++VPVGGGGL+AGV
Sbjct: 167 ----------PFDARNTVIGQGTVAAEILSQLTSMGKSADHVMVPVGGGGLLAGVVSYMA 216
Query: 201 DIMAGQGTVGLEIVDQGVESDRCASFSTAIKHGKPTPVSVQPTLADGLAVPLVG 254
D+ VG+E AS A+ +G P + DG AV VG
Sbjct: 217 DMAPRTAIVGIEPAG-------AASMQAALHNGGPITLETVDPFVDGAAVKRVG 263
>sp|Q7A4H2|ILVA_STAAN L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus aureus
(strain N315) GN=ilvA PE=3 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ +++LK++ Q SFK RGA A+ +LS++ K KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYDCKVYLKREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGAT---VIVEGADMKEAKNIALKKGAELGLTYIN 144
+LN+ + MP+ P+ K+ + +G + V++ G AL +E + +I+
Sbjct: 93 KKLNLNAVIFMPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQ 175
+++ ++GQGT+ E+++Q
Sbjct: 153 ----------PFNNVHTISGQGTLAKEMLEQ 173
>sp|Q99SJ1|ILVA_STAAM L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=ilvA PE=3 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ +++LK++ Q SFK RGA A+ +LS++ K KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYDCKVYLKREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGAT---VIVEGADMKEAKNIALKKGAELGLTYIN 144
+LN+ + MP+ P+ K+ + +G + V++ G AL +E + +I+
Sbjct: 93 KKLNLNAVIFMPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQ 175
+++ ++GQGT+ E+++Q
Sbjct: 153 ----------PFNNVHTISGQGTLAKEMLEQ 173
>sp|Q5HEE0|ILVA_STAAC L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus aureus
(strain COL) GN=ilvA PE=3 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ +++LK++ Q SFK RGA A+ +LS++ K KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYDCKVYLKREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGAT---VIVEGADMKEAKNIALKKGAELGLTYIN 144
+LN+ + MP+ P+ K+ + +G + V++ G AL +E + +I+
Sbjct: 93 KKLNLNAVIFMPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQ 175
+++ ++GQGT+ E+++Q
Sbjct: 153 ----------PFNNVHTISGQGTLAKEMLEQ 173
>sp|Q2FWJ9|ILVA_STAA8 L-threonine dehydratase biosynthetic IlvA OS=Staphylococcus aureus
(strain NCTC 8325) GN=ilvA PE=3 SV=1
Length = 422
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 28 HLSELTKMEIFLKKDFFQVTGSFKERGACYALLMLSEDQKKKGVISASLGNHAQAMCYHG 87
+LS+ +++LK++ Q SFK RGA A+ +LS++ K KG+ AS GNHAQ + Y
Sbjct: 33 YLSQKYDCKVYLKREDLQWVRSFKLRGAYNAISVLSDEAKSKGITCASAGNHAQGVAYTA 92
Query: 88 SRLNIPVTVVMPIVAPIMKIQACRRYGAT---VIVEGADMKEAKNIALKKGAELGLTYIN 144
+LN+ + MP+ P+ K+ + +G + V++ G AL +E + +I+
Sbjct: 93 KKLNLNAVIFMPVTTPLQKVNQVKFFGNSNVEVVLTGDTFDHCLAEALTYTSEHQMNFID 152
Query: 145 GYLSSGLSVLGYDHPDIMAGQGTVGLEIVDQ 175
+++ ++GQGT+ E+++Q
Sbjct: 153 ----------PFNNVHTISGQGTLAKEMLEQ 173
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,569,897
Number of Sequences: 539616
Number of extensions: 4341644
Number of successful extensions: 13089
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 463
Number of HSP's that attempted gapping in prelim test: 12629
Number of HSP's gapped (non-prelim): 564
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.7 bits)