Query         psy5629
Match_columns 203
No_of_seqs    68 out of 70
Neff          4.8 
Searched_HMMs 13730
Date          Fri Aug 16 22:32:47 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy5629.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/5629hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1kl9a1 a.60.14.1 (A:89-182) E  63.6     4.4 0.00032   28.5   4.4   56   44-104    23-89  (94)
  2 d1d2za_ a.77.1.2 (A:) Pelle de  57.6      16  0.0012   24.5   6.6   38   16-61      7-44  (102)
  3 d1ngra_ a.77.1.2 (A:) p75 low   56.3     3.4 0.00025   27.6   2.6   39   15-62      3-41  (85)
  4 d1j5ya1 a.4.5.1 (A:3-67) Putat  53.8     5.9 0.00043   24.9   3.4   35   32-67     13-47  (65)
  5 d1fc3a_ a.4.6.3 (A:) Spo0A {Ba  47.6      14   0.001   26.6   5.0   46   27-73     28-79  (119)
  6 d1tw3a1 a.4.5.29 (A:14-98) Car  45.9     8.5 0.00062   25.4   3.4   35   32-69     27-61  (85)
  7 d1yioa1 a.4.6.2 (A:131-200) Re  44.6      11 0.00082   23.9   3.7   35   30-68     19-53  (70)
  8 d1a04a1 a.4.6.2 (A:150-216) Ni  42.6      17  0.0012   22.7   4.3   35   30-68     13-47  (67)
  9 d2isya1 a.4.5.24 (A:2-64) Iron  40.6      32  0.0024   21.5   5.5   42   24-67      7-48  (63)
 10 d1l3la1 a.4.6.2 (A:170-234) Qu  39.9      19  0.0014   22.3   4.2   35   31-69     12-46  (65)
 11 d2cy5a1 b.55.1.2 (A:31-159) EP  37.8      27   0.002   24.0   5.3   38  141-178    91-129 (129)
 12 d1mkma1 a.4.5.33 (A:1-75) Tran  37.5      19  0.0014   22.9   4.1   35   32-67     11-45  (75)
 13 d1fsea_ a.4.6.2 (A:) Germinati  36.9      22  0.0016   22.0   4.2   34   31-68     12-45  (67)
 14 d1w0ha_ c.55.3.5 (A:) Exonucle  34.0      28   0.002   24.6   4.9   48   33-80    144-198 (200)
 15 d1m5ya1 a.223.1.2 (A:25-164,A:  33.9      34  0.0025   24.1   5.4   50   39-95     51-102 (173)
 16 d1ku3a_ a.4.13.2 (A:) Sigma70   32.8      30  0.0022   21.5   4.3   35   32-67     19-53  (61)
 17 d1tafa_ a.22.1.3 (A:) TAF(II)4  32.7      16  0.0012   23.9   3.0   49   16-65     16-65  (68)
 18 d2glia5 g.37.1.1 (A:229-257) F  30.9     9.3 0.00068   21.4   1.2   11  157-167    14-25  (29)
 19 d1jhfa1 a.4.5.2 (A:2-72) LexA   30.7      30  0.0022   21.9   4.1   41   26-67      9-50  (71)
 20 d2o97b1 a.55.1.1 (B:1-90) HU p  30.7      27  0.0019   23.0   4.0   32   43-75      6-37  (90)
 21 d1exea_ a.55.1.1 (A:) Transcri  30.3      28   0.002   23.4   4.1   33   43-76      6-38  (99)
 22 d1ixca1 a.4.5.37 (A:1-89) LysR  30.0      16  0.0012   24.0   2.7   29   41-70     15-43  (89)
 23 d1dpua_ a.4.5.16 (A:) C-termin  29.7      41   0.003   21.6   4.7   37   30-67     10-49  (69)
 24 d1ug2a_ a.4.1.3 (A:) 2610100b2  29.5      43  0.0031   23.1   5.0   38   36-74     50-88  (95)
 25 d2a6sa1 d.298.1.1 (A:1-83) Tox  28.4      31  0.0022   23.0   3.9   40    1-40      1-40  (83)
 26 d2cyya1 a.4.5.32 (A:5-64) Puta  28.1      27   0.002   21.1   3.4   34   32-67      9-42  (60)
 27 d1owfa_ a.55.1.1 (A:) Integrat  27.9      32  0.0023   22.8   4.0   32   43-75      7-38  (96)
 28 d1b9ma1 a.4.5.8 (A:-1-126) N-t  27.8      13 0.00094   25.6   1.9   28   40-68     31-58  (127)
 29 d2p7vb1 a.4.13.2 (B:546-613) S  27.7      19  0.0014   23.2   2.6   39   31-70     15-53  (68)
 30 d1b8za_ a.55.1.1 (A:) HU prote  27.6      33  0.0024   22.5   4.0   33   43-76      6-38  (90)
 31 d1hw1a1 a.4.5.6 (A:5-78) Fatty  27.4      34  0.0025   21.7   3.9   35   33-68     14-53  (74)
 32 d3bwga1 a.4.5.6 (A:5-82) Trans  26.9      36  0.0026   21.5   4.0   24   44-68     25-48  (78)
 33 d1l0oc_ a.4.13.2 (C:) SigmaF {  26.7      42  0.0031   20.3   4.2   39   26-65     16-54  (57)
 34 d1d5ya1 a.4.1.8 (A:3-56) Rob t  26.6      53  0.0039   19.0   4.5   38   26-64      3-41  (54)
 35 d1mula_ a.55.1.1 (A:) HU prote  25.9      43  0.0031   22.0   4.4   32   43-75      6-37  (90)
 36 d1fada_ a.77.1.2 (A:) FADD (Mo  25.9      26  0.0019   22.8   3.2   35   26-62      7-41  (95)
 37 d2fq4a1 a.4.1.9 (A:9-77) Trans  25.2      48  0.0035   20.2   4.3   52   23-75      5-57  (69)
 38 d1bl0a1 a.4.1.8 (A:9-62) MarA   25.1      60  0.0044   18.7   4.7   39   27-66      4-43  (54)
 39 d2cfxa1 a.4.5.32 (A:1-63) Tran  24.9      34  0.0025   21.0   3.5   24   43-67     21-44  (63)
 40 d1p71a_ a.55.1.1 (A:) HU prote  24.8      39  0.0028   22.3   4.0   32   43-75      6-37  (94)
 41 d2cg4a1 a.4.5.32 (A:4-66) Regu  24.8      34  0.0025   20.9   3.4   25   43-68     21-45  (63)
 42 d2foka3 a.4.5.12 (A:287-386) R  24.6      53  0.0038   22.8   4.7   44   53-101    15-58  (100)
 43 d1huua_ a.55.1.1 (A:) HU prote  24.6      40  0.0029   22.1   4.0   33   43-76      6-38  (90)
 44 d2g80a1 c.108.1.22 (A:17-241)   24.2      14   0.001   25.9   1.6   20   36-55    157-176 (225)
 45 d1ddfa_ a.77.1.2 (A:) Fas {Hum  24.0      26  0.0019   24.7   3.0   31   31-62     16-46  (127)
 46 d1s7ea1 a.4.1.1 (A:103-152) He  23.9      26  0.0019   20.6   2.6   22   39-61     23-44  (50)
 47 d1p4wa_ a.4.6.2 (A:) Transcrip  23.4      39  0.0028   22.0   3.7   36   29-68     28-63  (87)
 48 d2ev0a1 a.4.5.24 (A:2-62) Mang  22.3      68   0.005   19.6   4.6   42   24-67      5-46  (61)
 49 d2gf5a1 a.77.1.2 (A:89-191) FA  21.6      41   0.003   22.1   3.6   32   29-62     10-41  (103)
 50 d1e3oc1 a.4.1.1 (C:104-160) Oc  21.1      80  0.0058   18.9   4.7   25   36-61     20-44  (57)
 51 d2hoea1 a.4.5.63 (A:10-71) N-a  21.1      47  0.0034   20.3   3.6   34   32-68      5-38  (62)
 52 d1vkea_ a.152.1.2 (A:) Hypothe  20.5   1E+02  0.0075   21.0   5.8   43   23-66     41-84  (118)
 53 d1qzza1 a.4.5.29 (A:10-101) Ac  20.3      42   0.003   22.3   3.4   34   32-68     33-66  (92)

No 1  
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha, eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=63.57  E-value=4.4  Score=28.47  Aligned_cols=56  Identities=13%  Similarity=0.225  Sum_probs=43.0

Q ss_pred             HHHHHhhcCCCchHHHHHHHHHHHHHH-----------HHHhhccCChhhhhhhhhhcCCCChhHHHHHHHH
Q psy5629          44 YKSVSKKLSLPSADNVQDSVEGLVYFL-----------LLATILNISEYDFCNTLYHMGFTQDDKCEKILYE  104 (203)
Q Consensus        44 y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll-----------~essK~~ise~dF~dsl~~l~F~ee~~~~~vL~q  104 (203)
                      -.-.|++++.+.+..++...+-++|-|           .++-|..+++-   +.+..++++++  ..+.|.+
T Consensus        23 lRhVAe~~~~~~~~~lE~LY~~iaWpl~~ky~~~g~~aydaFK~av~dp---~il~~l~l~~~--vk~~L~~   89 (94)
T d1kl9a1          23 LRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDP---SILDSLDLNED--EREVLIN   89 (94)
T ss_dssp             HHHHHHHTTCCSHHHHHHHHHHTHHHHHHHHTCTTHHHHHHHHHHHHCG---GGGTTSSCCHH--HHHHHHH
T ss_pred             HHHHHHHhCCCccccHHHHHHHhhcccHHHhCCCCccHHHHHHHHhcCc---cccccCCCCHH--HHHHHHH
Confidence            446899999998789999999999999           34556655554   34567889988  8887765


No 2  
>d1d2za_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=57.63  E-value=16  Score=24.46  Aligned_cols=38  Identities=18%  Similarity=0.381  Sum_probs=28.7

Q ss_pred             ccCCChHHHHHHHHHHHHHHhcCCchhhHHHHHhhcCCCchHHHHH
Q psy5629          16 LFQLPPEVIQDFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQD   61 (203)
Q Consensus        16 L~~~~~~vv~efckiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~   61 (203)
                      +..++..+..++|++=    ..   .+-|...|.++|.+. +.|+.
T Consensus         7 i~~Lp~~~r~~L~~~L----d~---~~~Wr~LA~~Lg~~~-~~I~~   44 (102)
T d1d2za_           7 IRLLPLPVRAQLCAHL----DA---LDVWQQLATAVKLYP-DQVEQ   44 (102)
T ss_dssp             GGGSCHHHHHHHHHHH----HH---HTCHHHHHHHTTCCH-HHHHH
T ss_pred             hhhCCHHHHHHHHHHc----CC---cccHHHHHHHhCCCH-HHHHH
Confidence            3456788999999843    22   235999999999999 87764


No 3  
>d1ngra_ a.77.1.2 (A:) p75 low affinity neurotrophin receptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=56.32  E-value=3.4  Score=27.61  Aligned_cols=39  Identities=13%  Similarity=0.313  Sum_probs=30.5

Q ss_pred             cccCCChHHHHHHHHHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHH
Q psy5629          15 VLFQLPPEVIQDFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDS   62 (203)
Q Consensus        15 fL~~~~~~vv~efckiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~   62 (203)
                      +..++|+.+-.++|+.-     +|   +-|...|++||++. +.|+..
T Consensus         3 l~~~lp~~~r~~l~~~L-----dg---~dWr~LA~~LGl~~-~~I~~i   41 (85)
T d1ngra_           3 LYSSLPLTKREEVEKLL-----NG---DTWRHLAGELGYQP-EHIDSF   41 (85)
T ss_dssp             BSTTSCSTTTHHHHHHS-----CT---THHHHHHHHTTCCH-HHHHHH
T ss_pred             chhhCCHHHHHHHHHHc-----CC---CCHHHHHHHcCCCH-HHHHHH
Confidence            45678888889999865     24   45899999999999 887643


No 4  
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=53.77  E-value=5.9  Score=24.93  Aligned_cols=35  Identities=11%  Similarity=0.129  Sum_probs=28.2

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      +++|.+..++-.-+.+|+.|||+. .+|.+-+..|-
T Consensus        13 l~~L~~~~~~vs~~~La~~l~VS~-~TI~rdi~~L~   47 (65)
T d1j5ya1          13 VRILERSKEPVSGAQLAEELSVSR-QVIVQDIAYLR   47 (65)
T ss_dssp             HHHHHHCSSCBCHHHHHHHHTSCH-HHHHHHHHHHH
T ss_pred             HHHHHHcCCCCcHHHHHHHHCCCH-HHHHHHHHHHH
Confidence            456766666556779999999999 99999998864


No 5  
>d1fc3a_ a.4.6.3 (A:) Spo0A {Bacillus stearothermophilus [TaxId: 1422]}
Probab=47.62  E-value=14  Score=26.64  Aligned_cols=46  Identities=11%  Similarity=0.183  Sum_probs=34.3

Q ss_pred             HHHHHHHHHhcCCc------hhhHHHHHhhcCCCchHHHHHHHHHHHHHHHHH
Q psy5629          27 FCTLTTNYLKDGPN------QKLYKSVSKKLSLPSADNVQDSVEGLVYFLLLA   73 (203)
Q Consensus        27 fckiAiefl~~G~n------~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~es   73 (203)
                      +.+.|+....+.++      ...|...|+|++.++ ..|++++.-.+...-.-
T Consensus        28 Yl~~AI~l~~~d~~~l~~itK~LYp~IA~ky~TT~-s~VERaIRhaIevaW~r   79 (119)
T d1fc3a_          28 YLREAIAMVYHDIELLGSITKVLYPDIAKKYNTTA-SRVERAIRHAIEVAWSR   79 (119)
T ss_dssp             HHHHHHHHHHHCGGGGGGTTTTHHHHHHHHHTSCH-HHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHCHHHHHhHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHc
Confidence            34566666555443      447999999999999 99999998877665543


No 6  
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=45.91  E-value=8.5  Score=25.40  Aligned_cols=35  Identities=11%  Similarity=0.216  Sum_probs=27.6

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVYF   69 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~L   69 (203)
                      ++.|..|  |+..+.+|+++|+++ +.+++...+++.+
T Consensus        27 fd~l~~g--p~s~~eLA~~~g~~~-~~l~rlLr~l~a~   61 (85)
T d1tw3a1          27 VDHILAG--ARTVKALAARTDTRP-EALLRLIRHLVAI   61 (85)
T ss_dssp             HHHHHTT--CCBHHHHHHHHTCCH-HHHHHHHHHHHHT
T ss_pred             HHHhccC--CCCHHHHHHHhCcCh-hHHHHHHHHHHHC
Confidence            4678777  467899999999999 8888777776654


No 7  
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=44.57  E-value=11  Score=23.88  Aligned_cols=35  Identities=11%  Similarity=0.128  Sum_probs=28.9

Q ss_pred             HHHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          30 LTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        30 iAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      -.+.++..|-+.+   .+|+.||+++ .+|+.-+..+..
T Consensus        19 ~vl~~l~~G~s~~---eIA~~l~iS~-~TV~~~~~~i~~   53 (70)
T d1yioa1          19 QVLQLTIRGLMNK---QIAGELGIAE-VTVKVHRHNIMQ   53 (70)
T ss_dssp             HHHHHHTTTCCHH---HHHHHHTCCH-HHHHHHHHHHHH
T ss_pred             HHHHHHHcCCCHH---HHHHHHCCCH-HHHHHHHHHHHH
Confidence            3567788898777   8999999999 999998887753


No 8  
>d1a04a1 a.4.6.2 (A:150-216) Nitrate/nitrite response regulator (NarL) {Escherichia coli [TaxId: 562]}
Probab=42.63  E-value=17  Score=22.70  Aligned_cols=35  Identities=14%  Similarity=0.285  Sum_probs=28.8

Q ss_pred             HHHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          30 LTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        30 iAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      -.+.++..|-+.+   .+|++|++++ .+|..-+..+..
T Consensus        13 ~vl~ll~~G~s~~---eIA~~l~iS~-~TV~~~~~~i~~   47 (67)
T d1a04a1          13 DILKLIAQGLPNK---MIARRLDITE-STVKVHVKHMLK   47 (67)
T ss_dssp             HHHHHHHTTCCHH---HHHHHHTCCH-HHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCHH---HHHHHHCCCH-HHHHHHHHHHHH
Confidence            3467788887666   8999999999 999998887765


No 9  
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=40.61  E-value=32  Score=21.52  Aligned_cols=42  Identities=10%  Similarity=0.182  Sum_probs=31.9

Q ss_pred             HHHHHHHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          24 IQDFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        24 v~efckiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      ..+.++.-.+...+|...+ -..+|+.|||++ .+|-++|.-|.
T Consensus         7 ~EdYL~~I~~L~~~~~~v~-~~~iA~~L~vs~-~SVt~mvkrL~   48 (63)
T d2isya1           7 TEMYLRTIYDLEEEGVTPL-RARIAERLDQSG-PTVSQTVSRME   48 (63)
T ss_dssp             HHHHHHHHHHHHHTTCCCC-HHHHHHHHTCCH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCc-HHHHHHHhCCCc-hhHHHHHHHHH
Confidence            5677777777777776544 446999999999 99988887664


No 10 
>d1l3la1 a.4.6.2 (A:170-234) Quorum-sensing transcription factor TraR, C-terminal domain {Agrobacterium tumefaciens [TaxId: 358]}
Probab=39.95  E-value=19  Score=22.26  Aligned_cols=35  Identities=6%  Similarity=0.090  Sum_probs=28.5

Q ss_pred             HHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHHH
Q psy5629          31 TTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVYF   69 (203)
Q Consensus        31 Aiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~L   69 (203)
                      .+.++..|-+.+   .+|++|++++ .+|+.-+..+..-
T Consensus        12 vl~l~~~G~s~~---eIA~~l~iS~-~TV~~~~~~i~~K   46 (65)
T d1l3la1          12 YLRWIAVGKTME---EIADVEGVKY-NSVRVKLREAMKR   46 (65)
T ss_dssp             HHHHHTTTCCHH---HHHHHHTCCH-HHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCHH---HHHHHHCCCH-HHHHHHHHHHHHH
Confidence            456778887777   8999999999 9999988877543


No 11 
>d2cy5a1 b.55.1.2 (A:31-159) EPS8-like protein 1, EPS8L1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=37.81  E-value=27  Score=23.96  Aligned_cols=38  Identities=13%  Similarity=0.086  Sum_probs=26.4

Q ss_pred             EEeecCCCccc-ccceeecChhHHHHHHHHHHHHHHHhh
Q psy5629         141 RLHLENPDEQE-KQIDLEMDVRSVLNITQILEEALSHAK  178 (203)
Q Consensus       141 kL~l~~~~~~~-~~~~LqTDp~~L~hl~~~LE~AL~e~k  178 (203)
                      -+...+++... .=|+|+||+..=.-|.+.|+.|+++.|
T Consensus        91 afi~~~~~~~~~~CHvF~C~~~~A~~I~~~l~~A~~~~~  129 (129)
T d2cy5a1          91 LLVCQEPERAQPDVHFFQGLLLGAELIREDIQGALQNYR  129 (129)
T ss_dssp             EEEECCTTCSSCEEEEEEECTTHHHHHHHHHHHHHHHHC
T ss_pred             EEEecCCCCCceEEEEEEeccccHHHHHHHHHHHHHhcC
Confidence            34444443322 236999998777789999999998764


No 12 
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=37.47  E-value=19  Score=22.86  Aligned_cols=35  Identities=11%  Similarity=0.247  Sum_probs=29.4

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      ++++...+.+-...-+|+.+|++. .++-+.+..|.
T Consensus        11 L~~~a~~~~~~s~~eia~~~~~~~-st~~rll~tL~   45 (75)
T d1mkma1          11 LDFIVKNPGDVSVSEIAEKFNMSV-SNAYKYMVVLE   45 (75)
T ss_dssp             HHHHHHCSSCBCHHHHHHHTTCCH-HHHHHHHHHHH
T ss_pred             HHHHHhCCCCCCHHHHHHHHCcCH-HHHHHHHHHHH
Confidence            578888888888999999999999 88887776664


No 13 
>d1fsea_ a.4.6.2 (A:) Germination protein GerE {Bacillus subtilis [TaxId: 1423]}
Probab=36.94  E-value=22  Score=21.98  Aligned_cols=34  Identities=12%  Similarity=0.254  Sum_probs=27.9

Q ss_pred             HHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          31 TTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        31 Aiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      .+.++..|-+.+   .+|+.||+++ .+|+.-+..+..
T Consensus        12 vl~l~~~G~s~~---eIA~~L~is~-~TV~~~~~~i~~   45 (67)
T d1fsea_          12 VFELLVQDKTTK---EIASELFISE-KTVRNHISNAMQ   45 (67)
T ss_dssp             HHHHHTTTCCHH---HHHHHHTSCH-HHHHHHHHHHHH
T ss_pred             HHHHHHccCCHH---HHHHHHCCCH-HHHHHHHHHHHH
Confidence            456788887776   8899999999 999998887754


No 14 
>d1w0ha_ c.55.3.5 (A:) Exonuclease ERI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.98  E-value=28  Score=24.63  Aligned_cols=48  Identities=23%  Similarity=0.204  Sum_probs=34.8

Q ss_pred             HHHhcCCchhhHHHHHhhcCCCch-------HHHHHHHHHHHHHHHHHhhccCCh
Q psy5629          33 NYLKDGPNQKLYKSVSKKLSLPSA-------DNVQDSVEGLVYFLLLATILNISE   80 (203)
Q Consensus        33 efl~~G~n~K~y~~aA~KL~v~~~-------~~Vq~~Ve~L~~Ll~essK~~ise   80 (203)
                      .+...+.....-..+|+.+|++..       +++....+-+.+|+-+.+|.+|+|
T Consensus       144 ~~~~~~~~~~~L~~l~~~~gi~~~~~aH~Al~Da~~~a~v~~~ll~~g~~~~i~~  198 (200)
T d1w0ha_         144 NFYKVPRSQTKLTIMLEKLGMDYDGRPHCGLDDSKNIARIAVRMLQDGCELRINE  198 (200)
T ss_dssp             HHHTCCGGGCSHHHHHHHTTCCCCSCTTCHHHHHHHHHHHHHHHHHTTCCCCCCE
T ss_pred             hhccccccchHHHHHHHHcCCCCCCCCcChHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence            344444334457789999998851       467777888888888999999986


No 15 
>d1m5ya1 a.223.1.2 (A:25-164,A:395-427) Porin chaperone SurA, peptide-binding domain {Escherichia coli [TaxId: 562]}
Probab=33.86  E-value=34  Score=24.10  Aligned_cols=50  Identities=8%  Similarity=0.199  Sum_probs=37.3

Q ss_pred             CchhhHHHHHhhcCC--CchHHHHHHHHHHHHHHHHHhhccCChhhhhhhhhhcCCCCh
Q psy5629          39 PNQKLYKSVSKKLSL--PSADNVQDSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQD   95 (203)
Q Consensus        39 ~n~K~y~~aA~KL~v--~~~~~Vq~~Ve~L~~Ll~essK~~ise~dF~dsl~~l~F~ee   95 (203)
                      ++.+.....|+++|+  +. +.|...++.+.      ...++|..+|...|...|++.+
T Consensus        51 I~~~Ll~q~a~~~~i~vs~-~ev~~~i~~~~------~~~~~~~~~f~~~L~~~g~~~~  102 (173)
T d1m5ya1          51 IMDQIILQMGQKMGVKISD-EQLDQAIANIA------KQNNMTLDQMRSRLAYDGLNYN  102 (173)
T ss_dssp             HHHHHHHHHHHHTTCCCCH-HHHHHHHHHHH------HHTTCCHHHHHHHHHHHTCCHH
T ss_pred             HHHHHHHHHHHHhcccCCH-HHHHHHHHHHH------HHcCCCHHHHHHHHHHcCCCHH
Confidence            345677788888865  45 67888887643      2467899999999998999866


No 16 
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=32.82  E-value=30  Score=21.54  Aligned_cols=35  Identities=3%  Similarity=-0.006  Sum_probs=26.8

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      ..|=-.|..+..+.-+|++|||+. +.|.+...-.+
T Consensus        19 ~ryGl~~~~~~tl~eIa~~lgiS~-erVrqi~~~al   53 (61)
T d1ku3a_          19 MRKGLIDGREHTLEEVGAYFGVTR-ERIRQIENKAL   53 (61)
T ss_dssp             HHHTTTTSSCCCHHHHHHHHTCCH-HHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHHHCCCH-HHHHHHHHHHH
Confidence            445445677888999999999999 99988655433


No 17 
>d1tafa_ a.22.1.3 (A:) TAF(II)42 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=32.73  E-value=16  Score=23.94  Aligned_cols=49  Identities=20%  Similarity=0.365  Sum_probs=41.2

Q ss_pred             ccCCChHHHHHHHHHHHHHHhcC-CchhhHHHHHhhcCCCchHHHHHHHHH
Q psy5629          16 LFQLPPEVIQDFCTLTTNYLKDG-PNQKLYKSVSKKLSLPSADNVQDSVEG   65 (203)
Q Consensus        16 L~~~~~~vv~efckiAiefl~~G-~n~K~y~~aA~KL~v~~~~~Vq~~Ve~   65 (203)
                      ..+.++.|+.-+.-+|.+|...= ...+.|..-|.|-.++. |+|+=|+..
T Consensus        16 V~~yeprV~~qlLef~yRYtt~VL~DA~vys~HA~k~~id~-dDVkLAi~~   65 (68)
T d1tafa_          16 VQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDL-DDVRLATEV   65 (68)
T ss_dssp             CCCBCTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSBCH-HHHHHHHHH
T ss_pred             CccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCH-HHHHHHHHh
Confidence            35678889999999999998877 56778999999999999 999988754


No 18 
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.91  E-value=9.3  Score=21.37  Aligned_cols=11  Identities=18%  Similarity=0.175  Sum_probs=8.6

Q ss_pred             ecChhHH-HHHH
Q psy5629         157 EMDVRSV-LNIT  167 (203)
Q Consensus       157 qTDp~~L-~hl~  167 (203)
                      -|||++| +||-
T Consensus        14 YtdPSSLRKH~k   25 (29)
T d2glia5          14 YTDPSSLRKHVK   25 (29)
T ss_dssp             ESSHHHHHHHHH
T ss_pred             cCCHHHHHHHHH
Confidence            5899999 6663


No 19 
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=30.73  E-value=30  Score=21.92  Aligned_cols=41  Identities=7%  Similarity=0.241  Sum_probs=28.5

Q ss_pred             HHHHHHHHHHhcCCchhhHHHHHhhcCC-CchHHHHHHHHHHH
Q psy5629          26 DFCTLTTNYLKDGPNQKLYKSVSKKLSL-PSADNVQDSVEGLV   67 (203)
Q Consensus        26 efckiAiefl~~G~n~K~y~~aA~KL~v-~~~~~Vq~~Ve~L~   67 (203)
                      ++...-.+|+.+..-+-.|.-+|+.+|+ ++ .+|.+-|.+|.
T Consensus         9 ~vL~~I~~~~~~~G~~Ps~rei~~~~g~~S~-stv~~~l~~Le   50 (71)
T d1jhfa1           9 EVFDLIRDHISQTGMPPTRAEIAQRLGFRSP-NAAEEHLKALA   50 (71)
T ss_dssp             HHHHHHHHHHHHHSSCCCHHHHHHHTTCSSH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCHHHHHHHcCCCCH-HHHHHHHHHHH
Confidence            3334444666654445558899999999 56 88999888875


No 20 
>d2o97b1 a.55.1.1 (B:1-90) HU protein {Escherichia coli, beta-isoform [TaxId: 562]}
Probab=30.66  E-value=27  Score=23.04  Aligned_cols=32  Identities=3%  Similarity=0.104  Sum_probs=28.0

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhh
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATI   75 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK   75 (203)
                      ....+|+++|++. .+++..|+++...+.++.+
T Consensus         6 Li~~ia~~~~l~~-~~~~~~v~~~~~~i~~~L~   37 (90)
T d2o97b1           6 LIDKIAAGADISK-AAAGRALDAIIASVTESLK   37 (90)
T ss_dssp             HHHHHHHTTC-CH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHccCCCH-HHHHHHHHHHHHHHHHHHH
Confidence            4668899999999 9999999999999999865


No 21 
>d1exea_ a.55.1.1 (A:) Transcription factor 1, TF1 {Bacteriophage SPO1 [TaxId: 10685]}
Probab=30.35  E-value=28  Score=23.44  Aligned_cols=33  Identities=12%  Similarity=0.159  Sum_probs=29.2

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhhc
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATIL   76 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK~   76 (203)
                      ....+|++.|++. ..++..|+++...+.++.+-
T Consensus         6 li~~ia~~~~ls~-~~~~~~~~~~~~~i~~~L~~   38 (99)
T d1exea_           6 LIKAIAQDTGLTQ-VSVSKMLASFEKIITETVAK   38 (99)
T ss_dssp             HHHHHHHHHCSCC-TTHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCCCH-HHHHHHHHHHHHHHHHHHhc
Confidence            5678899999999 99999999999999997763


No 22 
>d1ixca1 a.4.5.37 (A:1-89) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=30.04  E-value=16  Score=24.02  Aligned_cols=29  Identities=14%  Similarity=0.164  Sum_probs=23.8

Q ss_pred             hhhHHHHHhhcCCCchHHHHHHHHHHHHHH
Q psy5629          41 QKLYKSVSKKLSLPSADNVQDSVEGLVYFL   70 (203)
Q Consensus        41 ~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll   70 (203)
                      ...+..||+.||++. .+|-+.+..|=.-+
T Consensus        15 ~gs~~~AA~~L~isq-~avs~~i~~LE~~l   43 (89)
T d1ixca1          15 AGNMAAAAKRLHVSQ-PPITRQMQALEADL   43 (89)
T ss_dssp             HSSHHHHHHHHTCCH-HHHHHHHHHHHHHH
T ss_pred             hCCHHHHHHHhCCCh-HHHHHHHHHHHhcC
Confidence            346789999999999 99999998875443


No 23 
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.66  E-value=41  Score=21.62  Aligned_cols=37  Identities=16%  Similarity=0.359  Sum_probs=26.7

Q ss_pred             HHHHHHhcCCchh--hHHHHHhhc-CCCchHHHHHHHHHHH
Q psy5629          30 LTTNYLKDGPNQK--LYKSVSKKL-SLPSADNVQDSVEGLV   67 (203)
Q Consensus        30 iAiefl~~G~n~K--~y~~aA~KL-~v~~~~~Vq~~Ve~L~   67 (203)
                      .-+++|++-+.+.  -.+-++++| +++. ..|.++++-|+
T Consensus        10 ~V~~~i~s~~~~eGi~~~el~~~l~~~~~-~~i~~aid~L~   49 (69)
T d1dpua_          10 QVLNLIKACPRPEGLNFQDLKNQLKHMSV-SSIKQAVDFLS   49 (69)
T ss_dssp             HHHHHHHHCCCTTTEEHHHHHHHSTTSCH-HHHHHHHHHHH
T ss_pred             HHHHHHHhCCCccCcCHHHHHHHccCCCH-HHHHHHHHHHH
Confidence            3456666655444  266788888 8999 99999998664


No 24 
>d1ug2a_ a.4.1.3 (A:) 2610100b20rik gene product {Mouse (Mus musculus) [TaxId: 10090]}
Probab=29.45  E-value=43  Score=23.09  Aligned_cols=38  Identities=16%  Similarity=0.288  Sum_probs=33.2

Q ss_pred             hcCCchhhHHHHHhhc-CCCchHHHHHHHHHHHHHHHHHh
Q psy5629          36 KDGPNQKLYKSVSKKL-SLPSADNVQDSVEGLVYFLLLAT   74 (203)
Q Consensus        36 ~~G~n~K~y~~aA~KL-~v~~~~~Vq~~Ve~L~~Ll~ess   74 (203)
                      ..|+..+.|..+|++| |=+. +.|.+=..-||.|+--++
T Consensus        50 ~~G~~~~tw~~Ia~~L~~Rs~-~qvr~Rf~~Lm~lf~~~~   88 (95)
T d1ug2a_          50 EQGAQPHTFSVISQQLGNKTP-VEVSHRFRELMQLFHTAC   88 (95)
T ss_dssp             HTTSCTTTHHHHHHHHSSCCH-HHHHHHHHHHHHHHHHCS
T ss_pred             HcCCcHHHHHHHHHHcCCCCH-HHHHHHHHHHHHHHHHhh
Confidence            5788889999999999 6777 999999999999986654


No 25 
>d2a6sa1 d.298.1.1 (A:1-83) Toxin YoeB {Escherichia coli [TaxId: 562]}
Probab=28.36  E-value=31  Score=23.02  Aligned_cols=40  Identities=8%  Similarity=0.066  Sum_probs=34.0

Q ss_pred             CeeecchhhHhhhccccCCChHHHHHHHHHHHHHHhcCCc
Q psy5629           1 MIINLNESHREHLSVLFQLPPEVIQDFCTLTTNYLKDGPN   40 (203)
Q Consensus         1 mll~Ls~~hkehL~fL~~~~~~vv~efckiAiefl~~G~n   40 (203)
                      |-|+++++..+++..+...|+.++..+.++--+-.+++-+
T Consensus         1 M~i~ft~~A~~d~~~~~~~d~k~~kkI~~ll~~i~~~p~~   40 (83)
T d2a6sa1           1 MKLIWSEESWDDYLYWQETDKRIVKKINELIKDTRRTPFE   40 (83)
T ss_dssp             CEEEECHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHSTTS
T ss_pred             CeEEECHHHHHHHHHHHHhCHHHHHHHHHHHHHHHhCcCC
Confidence            8899999999999999999999888888887777655433


No 26 
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=28.08  E-value=27  Score=21.15  Aligned_cols=34  Identities=15%  Similarity=0.287  Sum_probs=24.7

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      ++.|.+.+.. .|..+|+++|++. .+|..-+.-|.
T Consensus         9 l~~L~~n~r~-s~~eiA~~l~ls~-~~v~~Ri~~L~   42 (60)
T d2cyya1           9 IKILQNDGKA-PLREISKITGLAE-STIHERIRKLR   42 (60)
T ss_dssp             HHHHHHCTTC-CHHHHHHHHCSCH-HHHHHHHHHHH
T ss_pred             HHHHHHcCCC-CHHHHHHHHCcCH-HHHHHHHHHHH
Confidence            3444444222 5899999999999 99988877664


No 27 
>d1owfa_ a.55.1.1 (A:) Integration host factor alpha subunit (IHFA) {Escherichia coli [TaxId: 562]}
Probab=27.85  E-value=32  Score=22.85  Aligned_cols=32  Identities=19%  Similarity=0.115  Sum_probs=28.6

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhh
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATI   75 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK   75 (203)
                      ....+|+++|++. ..++..|++++..+.++.+
T Consensus         7 li~~ia~~~~lsk-~~~~~~~~~~~~~i~~~L~   38 (96)
T d1owfa_           7 MSEYLFDKLGLSK-RDAKELVELFFEEIRRALE   38 (96)
T ss_dssp             HHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHHh
Confidence            4678899999999 9999999999999998765


No 28 
>d1b9ma1 a.4.5.8 (A:-1-126) N-terminal domain of molybdate-dependent transcriptional regulator ModE {Escherichia coli [TaxId: 562]}
Probab=27.78  E-value=13  Score=25.62  Aligned_cols=28  Identities=7%  Similarity=0.030  Sum_probs=23.3

Q ss_pred             chhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          40 NQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        40 n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      ....+..||++||++. .+|-+.+..|=.
T Consensus        31 ~~gs~~~AA~~l~~sq-~avs~~i~~lE~   58 (127)
T d1b9ma1          31 LSGSISQGAKDAGISY-KSAWDAINEMNQ   58 (127)
T ss_dssp             HHSSHHHHHHHHTCCH-HHHHHHHHHHHH
T ss_pred             HhCChHHHHHHhcCCh-hHHHHHHHHHHH
Confidence            4556889999999999 999998887743


No 29 
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=27.69  E-value=19  Score=23.16  Aligned_cols=39  Identities=10%  Similarity=0.119  Sum_probs=29.4

Q ss_pred             HHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHHHH
Q psy5629          31 TTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVYFL   70 (203)
Q Consensus        31 Aiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll   70 (203)
                      ...|--.|..++.+.-+|+.+|++. +.|.+.-.-.+.=|
T Consensus        15 ~~rfGl~~~~~~tl~eI~~~lgiSr-erVrqie~~al~kL   53 (68)
T d2p7vb1          15 RMRFGIDMNTDYTLEEVGKQFDVTR-ERIRQIEAKALRKL   53 (68)
T ss_dssp             HHHTTTTSSSCCCHHHHHHHHTCCH-HHHHHHHHHHHHGG
T ss_pred             HHHcCCCCCCcCCHHHHHHHHCCCH-HHHHHHHHHHHHHH
Confidence            3455455677889999999999999 99988765544433


No 30 
>d1b8za_ a.55.1.1 (A:) HU protein {Thermotoga maritima [TaxId: 2336]}
Probab=27.58  E-value=33  Score=22.51  Aligned_cols=33  Identities=18%  Similarity=0.141  Sum_probs=28.9

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhhc
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATIL   76 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK~   76 (203)
                      ....+|++.|++. .+++..|+++...+.++..-
T Consensus         6 li~~ia~~~~~s~-~~~~~~~~~~~~~i~~~L~~   38 (90)
T d1b8za_           6 LIDRVAKKAGAKK-KDVKLILDTILETITEALAK   38 (90)
T ss_dssp             HHHHHHHHHTCCH-HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhCCCH-HHHHHHHHHHHHHHHHHHHh
Confidence            4568899999999 99999999999999987653


No 31 
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.42  E-value=34  Score=21.75  Aligned_cols=35  Identities=11%  Similarity=0.281  Sum_probs=26.5

Q ss_pred             HHHhcC---Cchhh--HHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          33 NYLKDG---PNQKL--YKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        33 efl~~G---~n~K~--y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      +.|..|   |+.+.  -..+|+.|||+. .+|.+|+.-|..
T Consensus        14 ~~I~~g~~~~G~~LPs~~eLa~~~~vSr-~tvr~Al~~L~~   53 (74)
T d1hw1a1          14 ESIWNNRFPPGTILPAERELSELIGVTR-TTLREVLQRLAR   53 (74)
T ss_dssp             HHHHTTSSCTTSBCCCHHHHHHHHTCCH-HHHHHHHHHHHH
T ss_pred             HHHHcCCCCCcCCCccHHHHHHHHCCCH-HHHHHHHHHHHH
Confidence            455555   55665  357999999999 999999887753


No 32 
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=26.86  E-value=36  Score=21.52  Aligned_cols=24  Identities=13%  Similarity=0.236  Sum_probs=20.6

Q ss_pred             HHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          44 YKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        44 y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      -..+|+.++|+. .+|..|+.-|..
T Consensus        25 e~~La~~~~vSr-~tvr~Al~~L~~   48 (78)
T d3bwga1          25 LETLMAQFEVSK-STITKSLELLEQ   48 (78)
T ss_dssp             HHHHHHHTTCCH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCH-HHHHHHHHHHHH
Confidence            568999999999 999999887753


No 33 
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.71  E-value=42  Score=20.29  Aligned_cols=39  Identities=10%  Similarity=0.130  Sum_probs=25.1

Q ss_pred             HHHHHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHH
Q psy5629          26 DFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEG   65 (203)
Q Consensus        26 efckiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~   65 (203)
                      .+-+..-+|...-.-.-..+-+|+.||++. +.|..+.++
T Consensus        16 ki~~~~~~l~q~lgRePT~~EiA~~l~~~~-e~V~~~l~a   54 (57)
T d1l0oc_          16 KIRKAKDELSKTRGRAPTVTEIADHLGISP-EDVVLAQEA   54 (57)
T ss_dssp             HHHHHHHHHHHHHTSCCBHHHHHHHHTSCH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCHHHHHHHHCcCH-HHHHHHHHH
Confidence            334444444443333334568999999999 999888765


No 34 
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.62  E-value=53  Score=19.00  Aligned_cols=38  Identities=13%  Similarity=0.062  Sum_probs=29.6

Q ss_pred             HHHHHHHHHHhcCCchh-hHHHHHhhcCCCchHHHHHHHH
Q psy5629          26 DFCTLTTNYLKDGPNQK-LYKSVSKKLSLPSADNVQDSVE   64 (203)
Q Consensus        26 efckiAiefl~~G~n~K-~y~~aA~KL~v~~~~~Vq~~Ve   64 (203)
                      ++..-+++||....... ..+.+|+.+|+++ ..+.+.+.
T Consensus         3 ~ii~~i~~yi~~~~~~~itl~~lA~~~~~S~-~~l~r~Fk   41 (54)
T d1d5ya1           3 GIIRDLLIWLEGHLDQPLSLDNVAAKAGYSK-WHLQRMFK   41 (54)
T ss_dssp             HHHHHHHHHHHTTSSSSCCCHHHHTTTSSCH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHccCCCCCHHHHHHHHCcCH-HHHHHHHH
Confidence            45677899999996555 5889999999999 66666543


No 35 
>d1mula_ a.55.1.1 (A:) HU protein {Escherichia coli [TaxId: 562]}
Probab=25.90  E-value=43  Score=21.96  Aligned_cols=32  Identities=13%  Similarity=0.171  Sum_probs=28.4

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhh
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATI   75 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK   75 (203)
                      ....+|++.|++. .++...|+++...+.++.+
T Consensus         6 li~~ia~~~~ltk-~~~~~~v~~~~~~i~~~L~   37 (90)
T d1mula_           6 LIDVIAEKAELSK-TQAKAALESTLAAITESLK   37 (90)
T ss_dssp             HHHHHHHHTTCCH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCcCH-HHHHHHHHHHHHHHHHHHH
Confidence            4568899999999 9999999999999998764


No 36 
>d1fada_ a.77.1.2 (A:) FADD (Mort1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=25.87  E-value=26  Score=22.85  Aligned_cols=35  Identities=9%  Similarity=0.269  Sum_probs=26.3

Q ss_pred             HHHHHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHH
Q psy5629          26 DFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDS   62 (203)
Q Consensus        26 efckiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~   62 (203)
                      +..+-+++++.+... +.|...|+.||++. ..|++.
T Consensus         7 ~~l~~~f~~ia~~lg-~~Wk~Lar~Lgls~-~~I~~I   41 (95)
T d1fada_           7 AYLQVAFDIVCDNVG-RDWKRLARELKVSE-AKMDGI   41 (95)
T ss_dssp             HHHHHHHHHHHHHHH-HHHHHHHHHTTCCH-HHHHHH
T ss_pred             hhHHHHHHHHHHHHH-HhHHHHHHHcCCCH-HHHHHH
Confidence            344667777777663 57999999999998 777654


No 37 
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=25.22  E-value=48  Score=20.24  Aligned_cols=52  Identities=4%  Similarity=0.055  Sum_probs=39.6

Q ss_pred             HHHHHHHHHHH-HHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhh
Q psy5629          23 VIQDFCTLTTN-YLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVYFLLLATI   75 (203)
Q Consensus        23 vv~efckiAie-fl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK   75 (203)
                      .-..+...|++ |..+|...-....+|++.|++. .++-+-+..---|+.+...
T Consensus         5 ~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~-~~~y~~F~~k~~L~~~~~~   57 (69)
T d2fq4a1           5 TQKAILSASYELLLESGFKAVTVDKIAERAKVSK-ATIYKWWPNKAAVVMDGFL   57 (69)
T ss_dssp             HHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCH-HHHHHHCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcccCCHHHHHHHHCcCH-HHHHHHCCCHHHHHHHHHH
Confidence            34567777888 5556777778999999999999 8888887766666666544


No 38 
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=25.14  E-value=60  Score=18.68  Aligned_cols=39  Identities=10%  Similarity=0.085  Sum_probs=30.1

Q ss_pred             HHHHHHHHHhcCCchh-hHHHHHhhcCCCchHHHHHHHHHH
Q psy5629          27 FCTLTTNYLKDGPNQK-LYKSVSKKLSLPSADNVQDSVEGL   66 (203)
Q Consensus        27 fckiAiefl~~G~n~K-~y~~aA~KL~v~~~~~Vq~~Ve~L   66 (203)
                      .+.-+++||.+..... ..+.+|+..|+++ -.+.+.+...
T Consensus         4 ~i~~v~~yI~~~~~~~~tl~~lA~~~~~s~-~~l~r~Fk~~   43 (54)
T d1bl0a1           4 TIHSILDWIEDNLESPLSLEKVSERSGYSK-WHLQRMFKKE   43 (54)
T ss_dssp             HHHHHHHHHHTTTTSCCCCHHHHHHSSSCH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHhccCCCCCHHHHHHHHCcCH-HHHHHHHHHH
Confidence            4566889999996654 5889999999999 7777665543


No 39 
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=24.92  E-value=34  Score=21.01  Aligned_cols=24  Identities=21%  Similarity=0.382  Sum_probs=20.8

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      .|..+|+++|+++ .+|..-+..|.
T Consensus        21 s~~~iA~~lgis~-~tv~~Ri~~L~   44 (63)
T d2cfxa1          21 SMRELGRKIKLSP-PSVTERVRQLE   44 (63)
T ss_dssp             CHHHHHHHHTCCH-HHHHHHHHHHH
T ss_pred             CHHHHHHHHCcCH-HHHHHHHHHHH
Confidence            5889999999999 99998887654


No 40 
>d1p71a_ a.55.1.1 (A:) HU protein {Anabaena sp. [TaxId: 1167]}
Probab=24.85  E-value=39  Score=22.29  Aligned_cols=32  Identities=16%  Similarity=0.196  Sum_probs=28.3

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhh
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATI   75 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK   75 (203)
                      ....+|++.|++. .+++..|+++...+.++..
T Consensus         6 li~~ia~~~~ls~-~~~~~~v~~~~~~i~~~L~   37 (94)
T d1p71a_           6 LVDAVAEKASVTK-KQADAVLTAALETIIEAVS   37 (94)
T ss_dssp             HHHHHHHHHTCCH-HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhCcCH-HHHHHHHHHHHHHHHHHHh
Confidence            4568899999999 9999999999999999765


No 41 
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=24.83  E-value=34  Score=20.95  Aligned_cols=25  Identities=16%  Similarity=0.384  Sum_probs=21.7

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      .|..+|+++|++. .+|..-+..|..
T Consensus        21 s~~eiA~~l~ls~-~~v~~Ri~rL~~   45 (63)
T d2cg4a1          21 AYAELAKQFGVSP-ETIHVRVEKMKQ   45 (63)
T ss_dssp             CHHHHHHHHTSCH-HHHHHHHHHHHH
T ss_pred             CHHHHHHHHCcCH-HHHHHHHHHHHH
Confidence            5889999999999 999998887653


No 42 
>d2foka3 a.4.5.12 (A:287-386) Restriction endonuclease FokI, N-terminal (recognition) domain {Flavobacterium okeanokoites [TaxId: 244]}
Probab=24.62  E-value=53  Score=22.81  Aligned_cols=44  Identities=23%  Similarity=0.285  Sum_probs=32.8

Q ss_pred             CCchHHHHHHHHHHHHHHHHHhhccCChhhhhhhhhhcCCCChhHHHHH
Q psy5629          53 LPSADNVQDSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQDDKCEKI  101 (203)
Q Consensus        53 v~~~~~Vq~~Ve~L~~Ll~essK~~ise~dF~dsl~~l~F~ee~~~~~v  101 (203)
                      .+. |-|..----++.+|+++.++++  .+.++.+..+||.|+  ..-+
T Consensus        15 ~dr-eYiRTRRa~Ilk~lie~~sl~~--~ei~~~L~~~gf~e~--~~ti   58 (100)
T d2foka3          15 TDK-EYVRTRRALILEILIKAGSLKI--EQIQDNLKKLGFDEV--IETI   58 (100)
T ss_dssp             TTH-HHHHHHHHHHHHHHHHCSSEEH--HHHHHHHHHTTCCCC--HHHH
T ss_pred             CcH-HHHHHHHHHHHHHHHHcCceeH--HHHHhHHHhcccccH--HHHH
Confidence            344 5555555568899999988765  677899999999999  4444


No 43 
>d1huua_ a.55.1.1 (A:) HU protein {Bacillus stearothermophilus [TaxId: 1422]}
Probab=24.58  E-value=40  Score=22.06  Aligned_cols=33  Identities=15%  Similarity=0.168  Sum_probs=28.9

Q ss_pred             hHHHHHhhcCCCchHHHHHHHHHHHHHHHHHhhc
Q psy5629          43 LYKSVSKKLSLPSADNVQDSVEGLVYFLLLATIL   76 (203)
Q Consensus        43 ~y~~aA~KL~v~~~~~Vq~~Ve~L~~Ll~essK~   76 (203)
                      ....+|+++|++. ..++..|+++...+.++.+-
T Consensus         6 li~~ia~~~~~~~-~~~~~~~~~~~~~i~~~L~~   38 (90)
T d1huua_           6 LINAVAETSGLSK-KDATKAVDAVFDSITEALRK   38 (90)
T ss_dssp             HHHHHHHHHCCCH-HHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhhCCCH-HHHHHHHHHHHHHHHHHHhc
Confidence            4568899999999 99999999999999997653


No 44 
>d2g80a1 c.108.1.22 (A:17-241) Protein UTR4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.19  E-value=14  Score=25.91  Aligned_cols=20  Identities=5%  Similarity=0.230  Sum_probs=18.1

Q ss_pred             hcCCchhhHHHHHhhcCCCc
Q psy5629          36 KDGPNQKLYKSVSKKLSLPS   55 (203)
Q Consensus        36 ~~G~n~K~y~~aA~KL~v~~   55 (203)
                      ...|+++.|..+++++|+++
T Consensus       157 ~~KP~p~~f~~~~~~lg~~p  176 (225)
T d2g80a1         157 GKKTETQSYANILRDIGAKA  176 (225)
T ss_dssp             CCTTCHHHHHHHHHHHTCCG
T ss_pred             CCCCChhHhHHHHHhcccCc
Confidence            45799999999999999997


No 45 
>d1ddfa_ a.77.1.2 (A:) Fas {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.03  E-value=26  Score=24.67  Aligned_cols=31  Identities=6%  Similarity=0.021  Sum_probs=24.4

Q ss_pred             HHHHHhcCCchhhHHHHHhhcCCCchHHHHHH
Q psy5629          31 TTNYLKDGPNQKLYKSVSKKLSLPSADNVQDS   62 (203)
Q Consensus        31 Aiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~   62 (203)
                      .+.++......+-|...|++||++. ..|+..
T Consensus        16 ~f~~ia~~l~~~dwk~lar~LGls~-~~I~~I   46 (127)
T d1ddfa_          16 YITTIAGVMTLSQVKGFVRKNGVNE-AKIDEI   46 (127)
T ss_dssp             HHHHHHHHSCHHHHHHHHHTTTSCH-HHHHHH
T ss_pred             HHHHHHHHCCHHHHHHHHHHcCCCH-HHHHHH
Confidence            4566777777788999999999998 776653


No 46 
>d1s7ea1 a.4.1.1 (A:103-152) Hepatocyte nuclear factor 6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.86  E-value=26  Score=20.63  Aligned_cols=22  Identities=27%  Similarity=0.513  Sum_probs=19.2

Q ss_pred             CchhhHHHHHhhcCCCchHHHHH
Q psy5629          39 PNQKLYKSVSKKLSLPSADNVQD   61 (203)
Q Consensus        39 ~n~K~y~~aA~KL~v~~~~~Vq~   61 (203)
                      |+......+|+++|++. ..|+.
T Consensus        23 P~~~~~~~LA~~l~l~~-~~V~~   44 (50)
T d1s7ea1          23 PSKELQITISQQLGLEL-STVSN   44 (50)
T ss_dssp             STHHHHHHHHTTSCSSS-HHHHH
T ss_pred             CCHHHHHHHHHHHCcCH-HHhhh
Confidence            77778889999999999 88874


No 47 
>d1p4wa_ a.4.6.2 (A:) Transcriptional regulator RcsB {Erwinia amylovora [TaxId: 552]}
Probab=23.40  E-value=39  Score=21.99  Aligned_cols=36  Identities=11%  Similarity=0.165  Sum_probs=29.3

Q ss_pred             HHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          29 TLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        29 kiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      .-.+.++..|-+.+   .+|+.|+++. .+|+.-+..+..
T Consensus        28 ~~vl~ll~~G~s~~---eIA~~l~iS~-~TV~~~~~~i~~   63 (87)
T d1p4wa_          28 SEVLRLFAEGFLVT---EIAKKLNRSI-KTISSQKKSAMM   63 (87)
T ss_dssp             HHHHHHHHHTCCHH---HHHHHHTSCH-HHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCHH---HHHHHhCCCH-HHHHHHHHHHHH
Confidence            34567888888777   8999999999 999988877754


No 48 
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=22.30  E-value=68  Score=19.64  Aligned_cols=42  Identities=12%  Similarity=0.210  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHH
Q psy5629          24 IQDFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLV   67 (203)
Q Consensus        24 v~efckiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~   67 (203)
                      +++..+.-.+....|.. -.-..+|+.|||++ .+|-..|.-|.
T Consensus         5 ~EdYLk~I~~l~~~~~~-v~~~~iA~~L~vs~-~SVs~mikrL~   46 (61)
T d2ev0a1           5 MEDYIEQIYMLIEEKGY-ARVSDIAEALAVHP-SSVTKMVQKLD   46 (61)
T ss_dssp             HHHHHHHHHHHHHHHSS-CCHHHHHHHHTCCH-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCC-ccHHHHHHHhCCCc-hhHHHHHHHHH
Confidence            55666665666555543 33468999999999 99988887664


No 49 
>d2gf5a1 a.77.1.2 (A:89-191) FADD (Mort1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.65  E-value=41  Score=22.14  Aligned_cols=32  Identities=13%  Similarity=0.276  Sum_probs=23.7

Q ss_pred             HHHHHHHhcCCchhhHHHHHhhcCCCchHHHHHH
Q psy5629          29 TLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQDS   62 (203)
Q Consensus        29 kiAiefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~   62 (203)
                      +-+++++..... +.|..+|++||++. ..|+..
T Consensus        10 ~~~f~~ia~~lg-~~W~~La~~Lgl~~-~~I~~I   41 (103)
T d2gf5a1          10 CAAFNVICDNVG-KDWRRLARQLKVSD-TKIDSI   41 (103)
T ss_dssp             HHHHHHHHHSCC-TTHHHHHHHTTCCH-HHHHHH
T ss_pred             HHHHHHHHHHHH-HhHHHHHHHcCCCH-HHHHHH
Confidence            456677777764 56999999999998 766653


No 50 
>d1e3oc1 a.4.1.1 (C:104-160) Oct-1 POU Homeodomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.11  E-value=80  Score=18.94  Aligned_cols=25  Identities=8%  Similarity=0.266  Sum_probs=20.4

Q ss_pred             hcCCchhhHHHHHhhcCCCchHHHHH
Q psy5629          36 KDGPNQKLYKSVSKKLSLPSADNVQD   61 (203)
Q Consensus        36 ~~G~n~K~y~~aA~KL~v~~~~~Vq~   61 (203)
                      ..-|+......+|+++|+++ ..|+.
T Consensus        20 ~~~P~~~~~~~LA~~lgL~~-~qV~~   44 (57)
T d1e3oc1          20 NQKPTSEDITLIAEQLNMEK-EVIRV   44 (57)
T ss_dssp             CSSCCHHHHHHHHHHHTCCH-HHHHH
T ss_pred             cCCCCHHHHHHHHHHHCCCH-HHHHH
Confidence            34477778999999999999 88874


No 51 
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=21.07  E-value=47  Score=20.32  Aligned_cols=34  Identities=12%  Similarity=0.177  Sum_probs=26.0

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      +..|.+||-+  -.-+|+.+|++. .+|-+.|+-|..
T Consensus         5 l~~i~~~pis--r~eLa~~~gls~-~TVs~~v~~L~~   38 (62)
T d2hoea1           5 LKRIMKSPVS--RVELAEELGLTK-TTVGEIAKIFLE   38 (62)
T ss_dssp             HHHHHHSCBC--HHHHHHHHTCCH-HHHHHHHHHHHH
T ss_pred             HHHHHHCCcC--HHHHHHHHCcCH-HHHHHHHHHHHH
Confidence            3456677743  468899999999 999988887753


No 52 
>d1vkea_ a.152.1.2 (A:) Hypothetical protein TM1620 {Thermotoga maritima [TaxId: 2336]}
Probab=20.47  E-value=1e+02  Score=21.01  Aligned_cols=43  Identities=2%  Similarity=0.016  Sum_probs=29.0

Q ss_pred             HHHHHHHHHHHHHhcCCc-hhhHHHHHhhcCCCchHHHHHHHHHH
Q psy5629          23 VIQDFCTLTTNYLKDGPN-QKLYKSVSKKLSLPSADNVQDSVEGL   66 (203)
Q Consensus        23 vv~efckiAiefl~~G~n-~K~y~~aA~KL~v~~~~~Vq~~Ve~L   66 (203)
                      ...|++-+|+.....-+. .+..-..|.++|++. +.|..++...
T Consensus        41 k~keLi~la~s~~~~c~~c~~~H~~~A~~~G~t~-eEI~Eal~va   84 (118)
T d1vkea_          41 KTKELMGLVASTVLRCDDCIRYHLVRCVQEGASD-EEIFEALDIA   84 (118)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCH-HHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCChHHHHHHHHHHHHcCCCH-HHHHHHHHHH
Confidence            377888888888764433 233557888888888 7777665443


No 53 
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=20.28  E-value=42  Score=22.25  Aligned_cols=34  Identities=12%  Similarity=0.164  Sum_probs=25.7

Q ss_pred             HHHHhcCCchhhHHHHHhhcCCCchHHHHHHHHHHHH
Q psy5629          32 TNYLKDGPNQKLYKSVSKKLSLPSADNVQDSVEGLVY   68 (203)
Q Consensus        32 iefl~~G~n~K~y~~aA~KL~v~~~~~Vq~~Ve~L~~   68 (203)
                      ++.|..||  +....+|++.|+++ +.+.+-..+|+.
T Consensus        33 fd~L~~gp--~t~~eLA~~~g~~~-~~l~rLlr~L~a   66 (92)
T d1qzza1          33 VDHLLAGA--DTLAGLADRTDTHP-QALSRLVRHLTV   66 (92)
T ss_dssp             HHHHHTTC--CSHHHHHHHHTCCH-HHHHHHHHHHHH
T ss_pred             hHHHhCCC--CCHHHHHHHHCcCc-hHHHHHHHHHHH
Confidence            36777774  66889999999999 777776666553


Done!