Your job contains 1 sequence.
>psy5629
MIINLNESHREHLSVLFQLPPEVIQDFCTLTTNYLKDGPNQKLYKSVSKKLSLPSADNVQ
DSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQDDKCEKILYEFYTQEKYNLYRTLISE
YISVVATRSHLNQCEPKFTIRLHLENPDEQEKQIDLEMDVRSVLNITQILEEALSHAKLN
QRKMSRRKQLSQTKSKVLSDSQK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy5629
(203 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q86X83 - symbol:COMMD2 "COMM domain-containing ... 220 3.6e-18 1
MGI|MGI:1098806 - symbol:Commd2 "COMM domain containing 2... 217 7.5e-18 1
ZFIN|ZDB-GENE-040718-118 - symbol:commd2 "COMM domain con... 194 2.0e-15 1
DICTYBASE|DDB_G0284879 - symbol:commd2 "COMM domain-conta... 137 2.8e-09 1
>UNIPROTKB|Q86X83 [details] [associations]
symbol:COMMD2 "COMM domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017920 InterPro:IPR009886 Pfam:PF07258
PROSITE:PS51269 eggNOG:NOG82905 OMA:LNQNGDH EMBL:AY542158
EMBL:AF059618 EMBL:AF125096 EMBL:BC046131 IPI:IPI00456048
RefSeq:NP_057178.2 UniGene:Hs.432729 ProteinModelPortal:Q86X83
IntAct:Q86X83 STRING:Q86X83 PhosphoSite:Q86X83 DMDM:116241310
PaxDb:Q86X83 PeptideAtlas:Q86X83 PRIDE:Q86X83 DNASU:51122
Ensembl:ENST00000473414 GeneID:51122 KEGG:hsa:51122 UCSC:uc003exj.2
CTD:51122 GeneCards:GC03M149448 HGNC:HGNC:24993 HPA:HPA044190
neXtProt:NX_Q86X83 PharmGKB:PA134923363 HOGENOM:HOG000008688
HOVERGEN:HBG060564 InParanoid:Q86X83 OrthoDB:EOG4B8JF3
PhylomeDB:Q86X83 ChiTaRS:COMMD2 GenomeRNAi:51122 NextBio:53905
ArrayExpress:Q86X83 Bgee:Q86X83 CleanEx:HS_COMMD2
Genevestigator:Q86X83 GermOnline:ENSG00000114744 Uniprot:Q86X83
Length = 199
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 64/202 (31%), Positives = 107/202 (52%)
Query: 1 MIINLNESHREHLSVLFQLPPEVIQDFCTLTTNYLKDGPNQXXXXXXXXXXXXXXADNVQ 60
M++ L+E H+EHL+ L Q+ V+ +F + +L+ G N +D VQ
Sbjct: 1 MLLELSEEHKEHLAFLPQVDSAVVAEFGRIAVEFLRRGANPKIYEGAARKLNVS-SDTVQ 59
Query: 61 DSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQDDKCEKILYEFYTQEKYNLYRTLISE 120
VEGL Y L ++ L ISE DF ++++ +GF+++ K+L + Y + + RT++SE
Sbjct: 60 HGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEE--LNKLLLQLYLDNRKEI-RTILSE 116
Query: 121 -------YISV-------VATRSHLNQCEPKFTIRLHL-ENPDEQEKQIDLEMDVRSVLN 165
Y ++ +A+RS Q +P TI+LHL +N D K L+ D ++L+
Sbjct: 117 LAPSLPSYHNLEWRLDVQLASRSLRQQIKPAVTIKLHLNQNGDHNTKV--LQTDPATLLH 174
Query: 166 ITQILEEALSHAKLNQ-RKMSR 186
+ Q LE+AL K N R++ R
Sbjct: 175 LVQQLEQALEEMKTNHCRRVVR 196
>MGI|MGI:1098806 [details] [associations]
symbol:Commd2 "COMM domain containing 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1098806 InterPro:IPR017920 InterPro:IPR009886
Pfam:PF07258 PROSITE:PS51269 eggNOG:NOG82905 OMA:LNQNGDH CTD:51122
HOVERGEN:HBG060564 OrthoDB:EOG4B8JF3 EMBL:AK047941 EMBL:AK083784
IPI:IPI00308593 RefSeq:NP_780304.2 UniGene:Mm.21901
PhosphoSite:Q8BXC6 PaxDb:Q8BXC6 PRIDE:Q8BXC6
Ensembl:ENSMUST00000160959 GeneID:52245 KEGG:mmu:52245
GeneTree:ENSGT00390000008489 InParanoid:Q8BXC6 NextBio:308700
Bgee:Q8BXC6 CleanEx:MM_COMMD2 Genevestigator:Q8BXC6
GermOnline:ENSMUSG00000036513 Uniprot:Q8BXC6
Length = 199
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 60/201 (29%), Positives = 106/201 (52%)
Query: 1 MIINLNESHREHLSVLFQLPPEVIQDFCTLTTNYLKDGPNQXXXXXXXXXXXXXXADNVQ 60
M+++L+E H+EHL+ L Q+ V+ +F + +L+ G N +D +Q
Sbjct: 1 MLLDLSEEHKEHLAFLPQVDTAVVAEFGRIAVEFLRRGSNPKIYEGAARKLNVS-SDTIQ 59
Query: 61 DSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQDDKCEKILYEFYTQEKYNLYRTLISE 120
VEGL Y L ++ L ISE DF ++++ +GF+++ K+L + Y + + RT+++E
Sbjct: 60 HGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEE--LNKLLLQLYLDNRKEI-RTILNE 116
Query: 121 -------YISV-------VATRSHLNQCEPKFTIRLHLENPDEQEKQIDLEMDVRSVLNI 166
Y S+ +A+RS Q +P TI+LHL+ + L+ D ++L++
Sbjct: 117 LAPRLPSYHSLEWRLDVQLASRSLRQQIKPAVTIKLHLDQNGDHSTHF-LQTDPATLLHL 175
Query: 167 TQILEEALSHAKLNQ-RKMSR 186
Q LE+AL K N R++ R
Sbjct: 176 VQQLEQALEEMKTNHCRRVVR 196
>ZFIN|ZDB-GENE-040718-118 [details] [associations]
symbol:commd2 "COMM domain containing 2"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040718-118 InterPro:IPR017920 InterPro:IPR009886
Pfam:PF07258 PROSITE:PS51269 eggNOG:NOG82905 OMA:LNQNGDH CTD:51122
HOGENOM:HOG000008688 HOVERGEN:HBG060564 OrthoDB:EOG4B8JF3
GeneTree:ENSGT00390000008489 EMBL:CU469387 EMBL:BC076149
IPI:IPI00506395 RefSeq:NP_001002421.1 UniGene:Dr.8026 STRING:Q6DH33
Ensembl:ENSDART00000012212 GeneID:436694 KEGG:dre:436694
InParanoid:Q6DH33 NextBio:20831137 Uniprot:Q6DH33
Length = 199
Score = 194 (73.4 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 55/200 (27%), Positives = 106/200 (53%)
Query: 1 MIINLNESHREHLSVLFQLPPEVIQDFCTLTTNYLKDGPNQXXXXXXXXXXXXXXADNVQ 60
M++ L+E H+EHL L ++ P V+ +F + +LK G N +++VQ
Sbjct: 1 MLLVLSEEHKEHLGFLSEVDPAVVGEFGRIAVEFLKKGSNPKIYEGAARKLSVS-SESVQ 59
Query: 61 DSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQDDKCEKILYEFYTQEKYNLYRTL--- 117
VEGL++ L ++ L ISE DF +++ +GF + + +L + Y + + + + L
Sbjct: 60 HGVEGLMFLLTESSKLMISELDFQDSVLVLGFPE--QLNDLLLQLYLENRKEIRQILSKL 117
Query: 118 ---ISEYISV-------VATRSHLNQCEPKFTIRLHLENPDEQEKQIDLEMDVRSVLNIT 167
I +Y ++ +A+R+ +Q +P T++LHLE+ ++ + L+ D ++ ++
Sbjct: 118 APSIPQYHNLEWRLDVQLASRALRHQVKPTVTMKLHLEDGAKRSAHV-LQTDPATLQHLI 176
Query: 168 QILEEALSHAKLNQ-RKMSR 186
Q LE AL+ K N R++ R
Sbjct: 177 QELERALAELKSNHCRRILR 196
>DICTYBASE|DDB_G0284879 [details] [associations]
symbol:commd2 "COMM domain-containing protein 2"
species:44689 "Dictyostelium discoideum" [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0284879
GenomeReviews:CM000153_GR EMBL:AAFI02000073 InterPro:IPR017920
InterPro:IPR009886 Pfam:PF07258 PROSITE:PS51269 RefSeq:XP_639903.1
PRIDE:Q54P14 EnsemblProtists:DDB0266453 GeneID:8624815
KEGG:ddi:DDB_G0284879 eggNOG:NOG82905 OMA:LNQNGDH
ProtClustDB:CLSZ2430431 Uniprot:Q54P14
Length = 200
Score = 137 (53.3 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 45/197 (22%), Positives = 90/197 (45%)
Query: 1 MIINLNESHREHLSVLFQLPPEVIQDFCTLTTNYLKDGPNQXXXXXXXXXXXXXXADNVQ 60
MII L+ +H++ LS L L E+I +FC + ++K G N+ AD ++
Sbjct: 1 MIIELDNTHKQDLSSLRSLSAEIISEFCKIALEFIKKGSNKKLYMGASQKLNIA-ADKIE 59
Query: 61 DSVEGLVYFLLLATILNISEYDFCNTLYHMGFTQDDKCEKILYEFYTQEKYNLYRTL--- 117
V+ + Y T ++E DF +TL + + D+ +IL E Y + ++ TL
Sbjct: 60 SLVDSITYLFSECTRFMLNENDFNDTLAPIKLS--DEVIEILRESYFDNRKDIRNTLQEF 117
Query: 118 ---ISEYISV-------VATRSHLNQCEPKFTIRLHLENPDEQEKQIDLEMDVRSVLNIT 167
+ Y ++ +A RS + P + ++L + + + L+ D ++ ++
Sbjct: 118 YPHLDHYQNLEWRLDTQIANRSLGSSINPIYLLKLITKCGSDNPIEHLLQTDPNNLKHLC 177
Query: 168 QILEEALSHAKLNQRKM 184
LE AL+ + + ++
Sbjct: 178 NELESALNEIRTYENRL 194
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.374 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 203 189 0.00089 110 3 11 22 0.45 32
31 0.42 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 4
No. of states in DFA: 553 (59 KB)
Total size of DFA: 151 KB (2092 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.43u 0.22s 19.65t Elapsed: 00:00:01
Total cpu time: 19.43u 0.22s 19.65t Elapsed: 00:00:01
Start: Thu Aug 15 13:13:21 2013 End: Thu Aug 15 13:13:22 2013