BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5634
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q55EH8|ABCGN_DICDI ABC transporter G family member 23 OS=Dictyostelium discoideum
GN=abcG23 PE=3 SV=2
Length = 701
Score = 92.8 bits (229), Expect = 5e-19, Method: Composition-based stats.
Identities = 41/68 (60%), Positives = 51/68 (75%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQQRRVS A AL+H P+LLILDEPTVGV PL+ IW HL+ +TK+ T+IITTHY++
Sbjct: 140 GGQQRRVSLATALIHSPKLLILDEPTVGVCPLVSSKIWEHLIFLTKNFGVTIIITTHYLQ 199
Query: 67 EARQAHTV 74
E R +
Sbjct: 200 ECRSCDNI 207
>sp|Q8T674|ABCGK_DICDI ABC transporter G family member 20 OS=Dictyostelium discoideum
GN=abcG20 PE=3 SV=1
Length = 730
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 7/73 (9%)
Query: 2 EISSR------GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGN 55
+I+SR GGQ++RVS AVAL+H P+LLILDEPTVG+D + +IW++L + G
Sbjct: 137 QINSRSVGLLSGGQKKRVSLAVALLHSPKLLILDEPTVGIDMEVASNIWSYLRSLANSG- 195
Query: 56 KTVIITTHYIEEA 68
T+IITTHYI EA
Sbjct: 196 VTIIITTHYINEA 208
>sp|P36879|YADG_ECOLI Uncharacterized ABC transporter ATP-binding protein YadG
OS=Escherichia coli (strain K12) GN=yadG PE=3 SV=1
Length = 308
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR+ A ALMH+P+LLILDEPT GVD LR+S+W L + G T+I+TTHY+E
Sbjct: 139 GGMKRRLMIARALMHEPKLLILDEPTAGVDIELRRSMWGFLKDLNDKGT-TIILTTHYLE 197
Query: 67 EA 68
EA
Sbjct: 198 EA 199
>sp|O07016|YVFR_BACSU Uncharacterized ABC transporter ATP-binding protein YvfR
OS=Bacillus subtilis (strain 168) GN=yvfR PE=3 SV=1
Length = 301
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+RR+SFA+AL +PELLILDEPTVG+D R W + ++ G KT+I +THY++
Sbjct: 133 GGQKRRLSFALALAGNPELLILDEPTVGMDTSSRHRFWQTIHGLSDQG-KTIIFSTHYLQ 191
Query: 67 EARQA 71
EA A
Sbjct: 192 EADDA 196
>sp|P55476|NODI_RHISN Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
NGR234) GN=nodI PE=3 SV=1
Length = 343
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QRR++ A AL++DP+LLILDEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 178 GGMQRRLTLACALINDPQLLILDEPTTGLDPHARHLIWERLRSLLALG-KTILLTTHFME 236
Query: 67 EA 68
EA
Sbjct: 237 EA 238
>sp|Q46YX6|NODI_CUPPJ Nod factor export ATP-binding protein I OS=Cupriavidus
pinatubonensis (strain JMP134 / LMG 1197) GN=nodI PE=3
SV=1
Length = 325
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLI+DEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 160 GGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLMASG-KTILLTTHFME 218
Query: 67 EARQ 70
EA +
Sbjct: 219 EAER 222
>sp|Q84K47|AB2A_ARATH ABC transporter A family member 2 OS=Arabidopsis thaliana GN=ABCA2
PE=2 SV=1
Length = 983
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 4 SSRGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTH 63
S GG +RR+S AV+L+ DP+L+ LDEPT G+DP+ R+ +W+ ++Q TK G + +I+TTH
Sbjct: 664 SYSGGMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWD-IIQETKKG-RAIILTTH 721
Query: 64 YIEEA 68
+EEA
Sbjct: 722 SMEEA 726
>sp|Q8KLG1|NODI_RHIEC Nod factor export ATP-binding protein I OS=Rhizobium etli (strain
CFN 42 / ATCC 51251) GN=nodI PE=3 SV=3
Length = 316
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LL++DEPT G+DP R IW L + G KT+I+TTH++E
Sbjct: 151 GGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRSLLTRG-KTIILTTHFME 209
Query: 67 EARQ 70
EA +
Sbjct: 210 EAER 213
>sp|Q9FKF2|AB11A_ARATH ABC transporter A family member 11 OS=Arabidopsis thaliana
GN=ABCA11 PE=3 SV=1
Length = 953
Score = 72.8 bits (177), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 4 SSRGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTH 63
S GG +RR+S AVAL+ DP+L+ LDEPT G+DP+ R+ +W+ ++Q +K G + +I+TTH
Sbjct: 665 SYSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITRRHVWD-IIQESKKG-RAIILTTH 722
Query: 64 YIEEA 68
+EEA
Sbjct: 723 SMEEA 727
>sp|Q9FLT5|AB9A_ARATH ABC transporter A family member 9 OS=Arabidopsis thaliana GN=ABCA9
PE=3 SV=1
Length = 950
Score = 72.0 bits (175), Expect = 9e-13, Method: Composition-based stats.
Identities = 32/65 (49%), Positives = 50/65 (76%), Gaps = 2/65 (3%)
Query: 4 SSRGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTH 63
S GG +RR+S A+AL+ DP+L+ LDEPT G+DP+ R+ +W+ ++Q +K G + +I+TTH
Sbjct: 666 SYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWD-IIQESKKG-RAIILTTH 723
Query: 64 YIEEA 68
+EEA
Sbjct: 724 SMEEA 728
>sp|P72335|NODI_RHIS3 Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain
N33) GN=nodI PE=3 SV=1
Length = 304
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LL++DEPT G+DP R IW L + G KT+I+TTH++E
Sbjct: 139 GGMKRRLTLARALINDPQLLVMDEPTTGLDPHARHLIWERLRFLLARG-KTIILTTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|Q1BWI2|NODI_BURCA Nod factor export ATP-binding protein I OS=Burkholderia cenocepacia
(strain AU 1054) GN=nodI PE=3 SV=1
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP++L+LDEPT G+DP R +W L + G KT++ITTH++E
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARG-KTILITTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|Q13ZJ1|NODI_BURXL Nod factor export ATP-binding protein I OS=Burkholderia xenovorans
(strain LB400) GN=nodI PE=3 SV=1
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP++LI+DEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 139 GGMKRRLTLARALVNDPDVLIMDEPTTGLDPQARHLIWERLRSLLARG-KTILLTTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|Q39GT7|NODI_BURS3 Nod factor export ATP-binding protein I OS=Burkholderia sp. (strain
383) GN=nodI PE=3 SV=2
Length = 304
Score = 71.6 bits (174), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP++L+LDEPT G+DP R +W L + G KT++ITTH++E
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARG-KTILITTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|Q1LKJ2|NODI_RALME Nod factor export ATP-binding protein I OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=nodI PE=3 SV=1
Length = 303
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLI+DEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 138 GGMRRRLTVARALINDPDLLIMDEPTTGLDPQARHLIWERLKSLLSAG-KTILLTTHFME 196
Query: 67 EARQ 70
EA +
Sbjct: 197 EAER 200
>sp|Q1M7W6|NODI_RHIL3 Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae (strain 3841) GN=nodI PE=3 SV=2
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLILDEPT G+DP R IW L + G KT+++TTH +E
Sbjct: 146 GGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARG-KTILLTTHIME 204
Query: 67 EARQ 70
EA +
Sbjct: 205 EAER 208
>sp|P08720|NODI_RHILV Nod factor export ATP-binding protein I OS=Rhizobium leguminosarum
bv. viciae GN=nodI PE=3 SV=1
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLILDEPT G+DP R IW L + G KT+++TTH +E
Sbjct: 146 GGMKRRLTLAGALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARG-KTILLTTHIME 204
Query: 67 EARQ 70
EA +
Sbjct: 205 EAER 208
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP LL++DEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 140 GGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARG-KTILLTTHFME 198
Query: 67 EARQ 70
EA +
Sbjct: 199 EAER 202
>sp|Q8GNH6|NODI_RHIML Nod factor export ATP-binding protein I OS=Rhizobium meliloti
GN=nodI PE=3 SV=1
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLILDEPT G+DP R IW L + G KT+++TTH +E
Sbjct: 170 GGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARG-KTILLTTHIME 228
Query: 67 EARQ 70
EA +
Sbjct: 229 EAER 232
>sp|O52618|NODI_RHIME Nod factor export ATP-binding protein I OS=Rhizobium meliloti
(strain 1021) GN=nodI PE=3 SV=3
Length = 335
Score = 70.9 bits (172), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLILDEPT G+DP R IW L + G KT+++TTH +E
Sbjct: 170 GGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARG-KTILLTTHIME 228
Query: 67 EARQ 70
EA +
Sbjct: 229 EAER 232
>sp|P26050|NODI_BRAJA Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum
(strain USDA 110) GN=nodI PE=3 SV=2
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP LL++DEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 141 GGMKRRLTLARALINDPHLLVMDEPTTGLDPHARHLIWERLRALLARG-KTILLTTHFME 199
Query: 67 EARQ 70
EA +
Sbjct: 200 EAER 203
>sp|P94440|YFIL_BACSU Uncharacterized ABC transporter ATP-binding protein YfiL
OS=Bacillus subtilis (strain 168) GN=yfiL PE=3 SV=2
Length = 311
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ ALMH PELLI+DEPTVG+DP R I + Q+ + G TVI T+HY+E
Sbjct: 135 GGMKRRINIGAALMHKPELLIMDEPTVGIDPQSRNHILETVKQLNETG-MTVIYTSHYME 193
Query: 67 E 67
E
Sbjct: 194 E 194
>sp|Q3JSQ0|NODI_BURP1 Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain 1710b) GN=nodI PE=3 SV=2
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP++L+LDEPT G+DP R +W L + G KT+++TTH++E
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARG-KTILLTTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|Q62K72|NODI_BURMA Nod factor export ATP-binding protein I OS=Burkholderia mallei
(strain ATCC 23344) GN=nodI PE=3 SV=2
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP++L+LDEPT G+DP R +W L + G KT+++TTH++E
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARG-KTILLTTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|Q63TX3|NODI_BURPS Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain K96243) GN=nodI PE=3 SV=2
Length = 304
Score = 69.7 bits (169), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP++L+LDEPT G+DP R +W L + G KT+++TTH++E
Sbjct: 139 GGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARG-KTILLTTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|P50332|NODI_RHIGA Nod factor export ATP-binding protein I OS=Rhizobium galegae
GN=nodI PE=3 SV=1
Length = 347
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/64 (50%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL++DP+LLILDEPT G+DP R IW L + G KT+++TTH ++
Sbjct: 182 GGMKRRLTLARALVNDPQLLILDEPTTGLDPPARHQIWERLRSLLIRG-KTILLTTHMMD 240
Query: 67 EARQ 70
EA +
Sbjct: 241 EAER 244
>sp|Q8XXY9|NODI_RALSO Nod factor export ATP-binding protein I OS=Ralstonia solanacearum
(strain GMI1000) GN=nodI PE=3 SV=1
Length = 321
Score = 69.7 bits (169), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/74 (44%), Positives = 51/74 (68%), Gaps = 4/74 (5%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A +L++DP++L++DEPT G+DP R IW L + G KT+++TTH++E
Sbjct: 150 GGMRRRLTVARSLINDPDVLVMDEPTTGLDPQARHLIWERLRSLLASG-KTILLTTHFME 208
Query: 67 EARQ---AHTVIDN 77
EA + VIDN
Sbjct: 209 EAERLCDELCVIDN 222
>sp|P37624|YHIH_ECOLI Uncharacterized ABC transporter ATP-binding protein YhiH
OS=Escherichia coli (strain K12) GN=yhiH PE=3 SV=3
Length = 911
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQI-TKDGNKTVIITTHYI 65
GG ++++ AL+HDPELLILDEPT GVDPL R W+ + I + N +V++ T Y+
Sbjct: 150 GGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSVLVATAYM 209
Query: 66 EEARQ 70
EEA +
Sbjct: 210 EEAER 214
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G ++R+S AVA++H PE+LILDEPT GVDP+ R W +V +++ T+ I+TH++ E
Sbjct: 411 GIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLMVDLSRQDKVTIFISTHFMNE 470
Query: 68 ARQA 71
A +
Sbjct: 471 AERC 474
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G ++R++ A +LMH+P++L LDEPT GVDPL R+ W H+ + + G TV++TTH+++E
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKG-VTVMVTTHFMDE 522
Query: 68 A 68
A
Sbjct: 523 A 523
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG ++++ A L+ +P++L+LDEP VGVDP+ R+ +W + ++ +G ++ +T Y++
Sbjct: 141 GGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEG-MLILWSTSYLD 199
Query: 67 EARQAHTVI 75
EA Q V+
Sbjct: 200 EAEQCRDVL 208
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 68.9 bits (167), Expect = 8e-12, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G ++R++ A +LMH+P++L LDEPT GVDPL R+ W H+ + + G TV++TTH+++E
Sbjct: 464 GFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVEKG-VTVMVTTHFMDE 522
Query: 68 A 68
A
Sbjct: 523 A 523
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG ++++ A L+ +P++L+LDEP VGVDP+ R+ +W + ++ +G ++ +T Y++
Sbjct: 141 GGMKQKLGLACTLVGEPKVLLLDEPGVGVDPISRRELWQMVHELAGEG-MLILWSTSYLD 199
Query: 67 EARQAHTVI 75
EA Q V+
Sbjct: 200 EAEQCRDVL 208
>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9
PE=1 SV=1
Length = 1624
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ R+++F +A++ DP++L+LDEPT G+DPL R IWN L + D + ++ +T +I+
Sbjct: 620 GGQNRKLTFGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKEGKSD--RVILFSTQFID 677
Query: 67 EA 68
EA
Sbjct: 678 EA 679
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 41/61 (67%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G +R++ F ++++ +P +++LDEP+ G+DP +Q +W + ++ + ++TTHY+ E
Sbjct: 1424 GIKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQVIRATFRNTERGALLTTHYMAE 1483
Query: 68 A 68
A
Sbjct: 1484 A 1484
>sp|Q2SVP3|NODI_BURTA Nod factor export ATP-binding protein I OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=nodI PE=3 SV=2
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 47/64 (73%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR++ A AL+++P++L+LDEPT G+DP R +W L + G KT+++TTH++E
Sbjct: 139 GGMKRRLTLARALVNNPDVLVLDEPTTGLDPQARHLMWERLRSLLVRG-KTILLTTHFME 197
Query: 67 EARQ 70
EA +
Sbjct: 198 EAER 201
>sp|P23703|NODI_RHILO Nod factor export ATP-binding protein I OS=Rhizobium loti (strain
MAFF303099) GN=nodI PE=3 SV=2
Length = 340
Score = 67.4 bits (163), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R ++ A AL++DP+L+++DEPT G+DP R IW L + G KT+I+TTH++E
Sbjct: 175 GGMKRCLTMARALINDPQLIVMDEPTTGLDPHARHLIWERLRALLARG-KTIILTTHFME 233
Query: 67 EARQ 70
EA +
Sbjct: 234 EAER 237
>sp|Q8K442|ABC8A_MOUSE ATP-binding cassette sub-family A member 8-A OS=Mus musculus
GN=Abca8a PE=2 SV=2
Length = 1620
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+R+++F +A++ DP++ +LDEPT G+DP R +WN L + + ++ V+ +T +++
Sbjct: 617 GGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNFLKE--RRADRVVLFSTQFMD 674
Query: 67 EA 68
EA
Sbjct: 675 EA 676
Score = 53.1 bits (126), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 40/61 (65%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G +R++ F ++++ +P +++LDEP+ G+DP +Q +W + + + ++TTHY+ E
Sbjct: 1420 GVKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIQATFSNTERGALLTTHYMAE 1479
Query: 68 A 68
A
Sbjct: 1480 A 1480
>sp|Q7TNJ2|ABCA7_RAT ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus
GN=Abca7 PE=1 SV=1
Length = 2170
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R+++ A+AL+ DP ++ LDEPT G+DP R+ +WN+L+ + ++G ++V++T+H +E
Sbjct: 1953 GGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNNLLSVVREG-RSVVLTSHSME 2011
Query: 67 E 67
E
Sbjct: 2012 E 2012
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QR++S A+A + ++I+DEPT GVDP R+ IW L++ + +T+I++TH+++
Sbjct: 940 GGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYRE--GRTLILSTHHLD 997
Query: 67 EA 68
EA
Sbjct: 998 EA 999
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R++S A+AL P LL+LDEPT G+DP R+ +WN +V I ++G + V++T+H +E
Sbjct: 2072 GGNKRKLSTAIALTGCPPLLLLDEPTTGMDPQARRMLWNTIVSIIREG-RAVVLTSHSME 2130
Query: 67 E 67
E
Sbjct: 2131 E 2131
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QR++S A+A + D ++++LDEPT GVDP R+SIW+ L++ +T+I++TH+++
Sbjct: 1064 GGMQRKLSVAIAFVGDSKVVVLDEPTSGVDPYSRRSIWDLLLKYRS--GRTIIMSTHHMD 1121
Query: 67 EA 68
EA
Sbjct: 1122 EA 1123
>sp|Q91V24|ABCA7_MOUSE ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7
PE=1 SV=1
Length = 2159
Score = 66.2 bits (160), Expect = 6e-11, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R+++ A+AL+ DP ++ LDEPT G+DP R+ +WN L+ + ++G ++V++T+H +E
Sbjct: 1942 GGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLSVVREG-RSVVLTSHSME 2000
Query: 67 E 67
E
Sbjct: 2001 E 2001
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QR++S A+A + ++I+DEPT GVDP R+ IW L++ + +T+I++TH+++
Sbjct: 939 GGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYRE--GRTLILSTHHLD 996
Query: 67 EA 68
EA
Sbjct: 997 EA 998
>sp|Q8K449|ABCA9_MOUSE ATP-binding cassette sub-family A member 9 OS=Mus musculus GN=Abca9
PE=1 SV=2
Length = 1623
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+R+++ +A++ DP++L+LDEPT G+DPL R IWN L + + + ++ +T +++
Sbjct: 620 GGQKRKLTLGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKE--RRAGRVIVFSTQFMD 677
Query: 67 EA 68
EA
Sbjct: 678 EA 679
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 40/61 (65%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G +R++ F ++++ +P +++LDEP+ G+DP +Q +W + + + ++TTHY+ E
Sbjct: 1423 GVKRKLCFVLSILGNPPVVLLDEPSTGMDPEGQQQMWQAIRATFTNTERGALLTTHYMAE 1482
Query: 68 A 68
A
Sbjct: 1483 A 1483
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QR++S A+A + D +++ILDEPT GVDP R+SIW+ L++ +T+I++TH+++
Sbjct: 1064 GGMQRKLSVAIAFVGDAKVVILDEPTSGVDPYSRRSIWDLLLKYRS--GRTIIMSTHHMD 1121
Query: 67 EA 68
EA
Sbjct: 1122 EA 1123
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R++S A+AL+ P L++LDEPT G+DP R+ +WN +V I ++G + V++T+H +E
Sbjct: 2073 GGNKRKLSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNVIVSIIREG-RAVVLTSHSME 2131
Query: 67 E 67
E
Sbjct: 2132 E 2132
>sp|P70970|ECFA2_BACSU Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Bacillus subtilis (strain 168) GN=ecfAB PE=3 SV=1
Length = 276
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ RRV+ A L DPE+L+LDEPT G+DP R+ I + ++ + GN T I+ TH +E
Sbjct: 135 GGQMRRVAIAGVLAMDPEVLVLDEPTAGLDPRGRKEIMDMFYELHQRGNLTTILVTHSME 194
Query: 67 EA 68
+A
Sbjct: 195 DA 196
>sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7
PE=1 SV=3
Length = 2146
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R+++ A+AL+ DP ++ LDEPT G+DP R+ +WN L+ + ++G ++V++T+H +E
Sbjct: 1928 GGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNSLLAVVREG-RSVMLTSHSME 1986
Query: 67 E 67
E
Sbjct: 1987 E 1987
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QR++S A+A + +++ILDEPT GVDP R+ IW L++ + +T+I++TH+++
Sbjct: 942 GGMQRKLSVAIAFVGGSQVVILDEPTAGVDPASRRGIWELLLKYRE--GRTLILSTHHLD 999
Query: 67 EA 68
EA
Sbjct: 1000 EA 1001
>sp|Q84M24|AB1A_ARATH ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1
PE=2 SV=2
Length = 1882
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQI-TKDGNKTVIITTHYI 65
GG +R++S A+A++ DP ++ILDEP+ G+DP+ ++ +W+ + ++ T+ G VI+TTH +
Sbjct: 1592 GGNKRKLSVAIAMIGDPPIVILDEPSTGMDPVAKRFMWDVISRLSTRSGKTAVILTTHSM 1651
Query: 66 EEARQAHTVI 75
EA+ T I
Sbjct: 1652 NEAQALCTRI 1661
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R++S +AL+ + +++ILDEPT G+DP + W + + +++TTH ++
Sbjct: 686 GGMKRKLSLGIALIGNSKVIILDEPTSGMDPYSMRLTWQ--LIKKIKKGRIILLTTHSMD 743
Query: 67 EARQ 70
EA +
Sbjct: 744 EAEE 747
>sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5
PE=2 SV=2
Length = 1642
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+R++S +A++ +P++L+LDEPT G+DP R +WN L + N+ + +TH+++
Sbjct: 617 GGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKY--RKANRVTVFSTHFMD 674
Query: 67 EA 68
EA
Sbjct: 675 EA 676
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
G +R++ FA++++ +P++ +LDEP+ G+DP +Q +W + K+ + I+TTHY+E
Sbjct: 1435 AGIKRKLCFALSMLGNPQITLLDEPSTGMDPKAKQHMWRAIRTAFKNRKRAAILTTHYME 1494
Query: 67 EA 68
EA
Sbjct: 1495 EA 1496
>sp|Q8CF82|ABCA5_RAT ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus
GN=Abca5 PE=2 SV=1
Length = 1642
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+R++S +A++ +P++L+LDEPT G+DP R +WN L + N+ + +TH+++
Sbjct: 617 GGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKY--RKANRVTVFSTHFMD 674
Query: 67 EA 68
EA
Sbjct: 675 EA 676
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
G +R++ FA++++ +P++ +LDEP+ G+DP +Q +W + K+ + ++TTHY+E
Sbjct: 1435 AGIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYME 1494
Query: 67 EA 68
EA
Sbjct: 1495 EA 1496
>sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5
PE=1 SV=2
Length = 1642
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+R++S +A++ +P++L+LDEPT G+DP R +WN L + N+ + +TH+++
Sbjct: 617 GGQKRKLSVGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKY--RKANRVTVFSTHFMD 674
Query: 67 EA 68
EA
Sbjct: 675 EA 676
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 43/62 (69%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
G +R++ FA++++ +P++ +LDEP+ G+DP +Q +W + K+ + ++TTHY+E
Sbjct: 1435 AGIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYME 1494
Query: 67 EA 68
EA
Sbjct: 1495 EA 1496
>sp|Q8K441|ABCA6_MOUSE ATP-binding cassette sub-family A member 6 OS=Mus musculus GN=Abca6
PE=2 SV=2
Length = 1624
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
GQ+R+++F +A + DP++L+LDEPTVG+DP RQ IW L + + + ++ +T +++E
Sbjct: 618 GQKRKLTFGIATVGDPQILLLDEPTVGLDPFSRQRIWGFLKE--RRADHVILFSTQFMDE 675
Query: 68 A 68
A
Sbjct: 676 A 676
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
G R++ F ++++ + +LILDEP+ G+D + +W + + KD K V+++TH +
Sbjct: 1422 AGATRKLCFVLSILGNSPVLILDEPSTGLDVSGKHQVWQAIQAVVKDNEKGVLLSTHDLA 1481
Query: 67 EA 68
EA
Sbjct: 1482 EA 1483
>sp|Q54DT1|ABCA9_DICDI ABC transporter A family member 9 OS=Dictyostelium discoideum
GN=abcA9 PE=3 SV=1
Length = 845
Score = 62.8 bits (151), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR+SFAVA+ D ++ LDEP+ G+ LR+ +W + + K N+++I+TTH +E
Sbjct: 666 GGMKRRLSFAVAMTGDSSIIFLDEPSTGISSELRRDLWRTINDLKK--NRSIILTTHSME 723
Query: 67 EA 68
EA
Sbjct: 724 EA 725
>sp|Q9FLT8|AB12A_ARATH ABC transporter A family member 12 OS=Arabidopsis thaliana
GN=ABCA12 PE=3 SV=1
Length = 917
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +RR+S A++L+ +P+++ LDEP+ G+DP R+++WN + + + N +I+TTH +E
Sbjct: 736 GGMKRRLSVAISLIGNPKVVYLDEPSTGLDPASRKNLWNVIKRAKQ--NTAIILTTHSME 793
Query: 67 EA 68
EA
Sbjct: 794 EA 795
>sp|P41233|ABCA1_MOUSE ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1
PE=1 SV=4
Length = 2261
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG +R++S A+AL+ P ++ LDEPT G+DP R+ +WN + I K+G ++V++T+H +E
Sbjct: 2047 GGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEG-RSVVLTSHSME 2105
Query: 67 E 67
E
Sbjct: 2106 E 2106
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 45/62 (72%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GG QR++S A+A + +++ILDEPT GVDP R+ IW L++ + +T+I++TH+++
Sbjct: 1035 GGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ--GRTIILSTHHMD 1092
Query: 67 EA 68
EA
Sbjct: 1093 EA 1094
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 62.4 bits (150), Expect = 8e-10, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 7 GGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIE 66
GGQ+R+++F +A++ D ++ +LDEPT G+DP R +WN L + + ++ V+ +T +++
Sbjct: 618 GGQKRKLTFGIAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKE--RRADRVVLFSTQFMD 675
Query: 67 EA 68
EA
Sbjct: 676 EA 677
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 43/61 (70%)
Query: 8 GQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVQITKDGNKTVIITTHYIEE 67
G +R++ F ++++ +P +L+LDEP+ G+DP +Q IW + I K+ ++ ++TTHY+ E
Sbjct: 1419 GVKRKLCFVLSILGNPSILLLDEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAE 1478
Query: 68 A 68
A
Sbjct: 1479 A 1479
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,295,738
Number of Sequences: 539616
Number of extensions: 957312
Number of successful extensions: 7510
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3506
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 3142
Number of HSP's gapped (non-prelim): 4415
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)