Query psy5637
Match_columns 335
No_of_seqs 277 out of 2520
Neff 6.5
Searched_HMMs 46136
Date Fri Aug 16 22:43:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5637.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/5637hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0236|consensus 100.0 1.2E-50 2.6E-55 422.9 16.8 274 27-300 38-456 (665)
2 COG0659 SUL1 Sulfate permease 100.0 5.7E-44 1.2E-48 365.9 16.6 266 46-316 2-386 (554)
3 TIGR00815 sulP high affinity s 100.0 2.7E-43 5.9E-48 363.0 19.8 255 52-313 1-393 (563)
4 PRK11660 putative transporter; 100.0 6.3E-41 1.4E-45 345.7 17.1 233 46-280 5-383 (568)
5 PF00916 Sulfate_transp: Sulfa 100.0 1.2E-31 2.6E-36 252.6 8.8 160 123-283 65-254 (280)
6 TIGR03173 pbuX xanthine permea 99.5 4.6E-13 1E-17 133.4 14.4 112 167-281 211-328 (406)
7 TIGR00801 ncs2 uracil-xanthine 99.4 8.7E-13 1.9E-17 131.9 13.6 175 123-302 161-364 (415)
8 PF13792 Sulfate_tra_GLY: Sulf 99.3 3.1E-13 6.8E-18 106.3 1.0 40 51-90 1-40 (84)
9 PRK10720 uracil transporter; P 99.1 9.8E-10 2.1E-14 110.5 13.5 169 121-300 152-353 (428)
10 TIGR03616 RutG pyrimidine util 98.7 2.7E-08 5.9E-13 100.1 8.9 126 161-292 233-367 (429)
11 KOG0236|consensus 98.7 2.8E-08 6E-13 105.0 7.4 64 272-335 364-427 (665)
12 COG0659 SUL1 Sulfate permease 98.6 1.2E-07 2.5E-12 98.4 9.7 64 272-335 285-348 (554)
13 PF00916 Sulfate_transp: Sulfa 98.5 5.4E-08 1.2E-12 91.7 3.3 64 272-335 184-247 (280)
14 PRK11660 putative transporter; 98.3 4.1E-07 9E-12 94.7 3.8 64 272-335 316-379 (568)
15 TIGR00815 sulP high affinity s 98.1 1.5E-06 3.2E-11 90.5 3.5 64 272-335 296-359 (563)
16 COG2233 UraA Xanthine/uracil p 97.9 4.7E-05 1E-09 76.8 9.2 176 123-303 172-376 (451)
17 PRK11412 putative uracil/xanth 97.9 0.0002 4.4E-09 72.4 13.2 163 167-334 231-402 (433)
18 COG2252 Xanthine/uracil/vitami 97.4 0.0045 9.8E-08 62.4 14.5 103 176-280 244-352 (436)
19 PF00860 Xan_ur_permease: Perm 97.3 0.00083 1.8E-08 66.8 8.0 105 176-280 231-341 (389)
20 TIGR00843 benE benzoate transp 96.9 0.0029 6.3E-08 63.2 7.8 147 165-316 212-366 (395)
21 TIGR00834 ae anion exchange pr 96.1 0.092 2E-06 57.5 13.7 103 177-280 656-779 (900)
22 PF03594 BenE: Benzoate membra 95.9 0.036 7.8E-07 55.0 8.4 149 164-317 195-351 (378)
23 KOG1172|consensus 95.4 0.2 4.4E-06 54.2 12.5 104 176-280 631-755 (876)
24 PF00955 HCO3_cotransp: HCO3- 93.2 0.026 5.5E-07 58.3 0.0 101 179-280 339-460 (510)
25 TIGR03173 pbuX xanthine permea 91.6 0.21 4.5E-06 50.0 4.2 63 273-335 259-323 (406)
26 TIGR00801 ncs2 uracil-xanthine 86.1 0.39 8.5E-06 48.3 1.7 62 274-335 276-339 (415)
27 COG3135 BenE Uncharacterized p 80.6 1.9 4.2E-05 42.7 3.9 144 165-313 211-362 (402)
28 PF11840 DUF3360: Protein of u 66.7 1.5E+02 0.0033 30.0 13.3 99 205-304 318-421 (492)
29 PRK12600 putative monovalent c 49.9 32 0.0007 27.5 4.5 33 177-209 59-91 (94)
30 KOG1292|consensus 42.3 38 0.00082 35.1 4.6 98 184-284 277-384 (510)
31 PRK10720 uracil transporter; P 39.9 21 0.00045 36.2 2.4 58 274-335 267-330 (428)
32 PRK12657 putative monovalent c 39.6 54 0.0012 26.6 4.3 28 177-204 63-90 (100)
33 COG2252 Xanthine/uracil/vitami 29.4 48 0.001 33.9 3.0 52 281-334 296-347 (436)
34 PF04066 MrpF_PhaF: Multiple r 27.0 1.1E+02 0.0023 21.8 3.7 25 177-201 30-54 (55)
35 PF12911 OppC_N: N-terminal TM 25.2 1.4E+02 0.0031 20.6 4.1 38 294-332 3-40 (56)
36 PRK12599 putative monovalent c 23.1 1.5E+02 0.0033 23.5 4.3 28 177-204 61-88 (91)
37 COG4802 FtrB Ferredoxin-thiore 22.1 68 0.0015 26.2 2.1 21 197-217 13-33 (110)
38 COG0573 PstC ABC-type phosphat 21.8 7.6E+02 0.017 24.2 9.9 196 54-266 64-293 (310)
39 PRK06161 putative monovalent c 21.6 1.8E+02 0.0038 23.0 4.3 28 177-204 59-86 (89)
40 PRK12612 putative monovalent c 20.1 1.9E+02 0.0041 22.7 4.2 28 176-203 58-85 (87)
No 1
>KOG0236|consensus
Probab=100.00 E-value=1.2e-50 Score=422.94 Aligned_cols=274 Identities=33% Similarity=0.580 Sum_probs=233.2
Q ss_pred hhhhhhhhcCCCCccCh---hhhhhhhccccccccCCCCccccchhhHHhHHHHhhhcccchhhh---------------
Q psy5637 27 VVEWCKSQFSDTQCCNP---FSWLVQLFPILDWLPKYKWKSDLSQDIVSGVTIAVVHIPQGVVEW--------------- 88 (335)
Q Consensus 27 ~~~~~~~~~~~~~~~~~---~~~l~~~~P~~~Wl~~Y~~~~~l~~D~iAGltv~~~~iPq~mAya--------------- 88 (335)
..+..+++.++.++|+. .++++++||+++|||+|+||+|+.+|++||+|||+++||||||||
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~Pil~Wlp~Y~~~~~l~~DliaGltvg~l~VPQ~iaYa~la~lppiyGLYssf 117 (665)
T KOG0236|consen 38 TRKDKSERFRNKQRCSSNKFLRSLLSLLPILEWLPKYSLKEWLLGDLIAGLTVGSLSVPQGLAYALLAGLPPIYGLYSSF 117 (665)
T ss_pred ccccHHHHhhccccccHHHHHHHHHhhccHhhhhhcCCchhhchHHHhcCceeeeeecchHHHHHHHcCCChHHHHHHHH
Confidence 34555666666666664 889999999999999999999999999999999999999999996
Q ss_pred ----------------------------------cc------CCCCchhhhhHHHHHHHHH-------------------
Q psy5637 89 ----------------------------------CK------SQFSDTQCCNPFSWLVQLF------------------- 109 (335)
Q Consensus 89 ----------------------------------~~------~~~~~~~~a~~lallvGi~------------------- 109 (335)
+. ...+++++++++|+++|++
T Consensus 118 ~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~i~va~~lt~l~Giiq~~mG~lrLGfl~~~lS~~ 197 (665)
T KOG0236|consen 118 FPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATTIQVATTLTFLTGIIQLILGLLRLGFLVRFLSEP 197 (665)
T ss_pred HHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchhHHHHHHHHHHHHHHHHHHHHHhcChHHHHccHH
Confidence 00 1246789999999999999
Q ss_pred -------------------hhhc-c-CCCCCCCC-----------C----hhHHHHHHHHHHHHHH--------------
Q psy5637 110 -------------------PILD-W-LPKYKWKS-----------D----LSQDIVSGVTIAVVHI-------------- 139 (335)
Q Consensus 110 -------------------~ilG-~-lp~~~~~~-----------n----~~~~~ig~~~l~iL~~-------------- 139 (335)
.++| . ++++.+.. | +.+.++|++++++|+.
T Consensus 198 ~l~GFt~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~L~~~k~~~~~~~~k~~~ 277 (665)
T KOG0236|consen 198 ALSGFTTGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLANLPKTLATLVLSLIFLVVLLLTKELNPKFKKKLFS 277 (665)
T ss_pred HHhHhhhhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhhcccccchhhhhHHHHHHHHHHHHHhhhhhccccee
Confidence 3455 2 55555433 2 4589999999999887
Q ss_pred ---h----------HHhhhcccccccccceeeccCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc
Q psy5637 140 ---P----------QASSKFGLKENYHITTVGYIPTGFPVPEVPPLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKY 206 (335)
Q Consensus 140 ---P----------~is~~~~~~~~~~v~ivG~Ip~glp~~~~P~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~ 206 (335)
| +++++++.+.+++..++++||+|+|+|++|+++....++++++++++++++|+++++|.+|++++|
T Consensus 278 v~~~~~li~vIi~T~~~~~~~~~~~~~~~~~~~i~~g~~~~~lp~~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y 357 (665)
T KOG0236|consen 278 VPIPFELIVVIIGTLISYIFRLEGRYGPIIVGEIPRGFPPPSLPPLSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGY 357 (665)
T ss_pred ecccHHHHHHHHHHHHHHHhccccccCCeeeccCCCCCCCCCCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 567888887777888888999999999999999999999999999999999999999999999999
Q ss_pred ccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccchhhHHHHHHHHHHHHhhCCCCCccchhhhh--hhhh
Q psy5637 207 KIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGISCGCLAIVLLYVGPFFQPLPHGFSN--IFAS 284 (335)
Q Consensus 207 ~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~--ii~a 284 (335)
++|+||||+|+|++|++||||+|+|.+|+++||++|.++|+|||+|++++++++++++++++|+|+++|+++|+ ++.+
T Consensus 358 ~vd~nqELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~~vLaaIIi~a 437 (665)
T KOG0236|consen 358 KVDSNQELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLFLGPLFYYIPKCVLAAIIISA 437 (665)
T ss_pred eeCCChHHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999 3334
Q ss_pred hhc-cccc--chhhHHHHH
Q psy5637 285 FFS-CVPF--AASLSRSLI 300 (335)
Q Consensus 285 ~~~-~~~~--~~s~~rt~v 300 (335)
..+ ..+. ...+||.-.
T Consensus 438 ~~~~l~~~~~~~~lwr~~k 456 (665)
T KOG0236|consen 438 LIGMLIQLEDLKPLWRLSK 456 (665)
T ss_pred hhHHHhhhhhhhhheeCCH
Confidence 444 3332 344454443
No 2
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-44 Score=365.91 Aligned_cols=266 Identities=25% Similarity=0.341 Sum_probs=218.8
Q ss_pred hhhhhccccccccCCCCccccchhhHHhHHHHhhhcccchhhh--------------------------cc---------
Q psy5637 46 WLVQLFPILDWLPKYKWKSDLSQDIVSGVTIAVVHIPQGVVEW--------------------------CK--------- 90 (335)
Q Consensus 46 ~l~~~~P~~~Wl~~Y~~~~~l~~D~iAGltv~~~~iPq~mAya--------------------------~~--------- 90 (335)
.+.+++|...|.+.|+ ++|+++|++||+|||++++||+|||| ..
T Consensus 2 ~~~~~~~~~~~~~~~~-~~~l~~Dl~AGltva~valP~ama~a~~aGv~p~~GLyas~i~~~v~alfGgs~~~i~GPt~a 80 (554)
T COG0659 2 RLRSEIPTLKWLPYYF-RSWLRGDLLAGLTVAAVALPLAMAFAIAAGVPPEAGLYASIVAGIIYALFGGSRGLISGPTGA 80 (554)
T ss_pred cchhhccHHHhccccc-hhhhHHHHHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCccceeccchh
Confidence 4678899999999999 89999999999999999999999996 00
Q ss_pred --------CC---CCchhhhhHHHHHHHHH--------------------------------------hhhc-cC-----
Q psy5637 91 --------SQ---FSDTQCCNPFSWLVQLF--------------------------------------PILD-WL----- 115 (335)
Q Consensus 91 --------~~---~~~~~~a~~lallvGi~--------------------------------------~ilG-~l----- 115 (335)
-. .++.+++.++++++|++ +++| +.
T Consensus 81 ~~~v~a~~i~~~~~~g~~~~~~~tllaGv~~i~~G~lRLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~ 160 (554)
T COG0659 81 FAVVLAAVIASLVETGLALAFLATLLAGVFQILLGLLRLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGF 160 (554)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccch
Confidence 01 33466777788999988 1222 11
Q ss_pred -------CCCCCCCChhHHHHHHHHHHHHHH--------h----------HHhhhccccc-ccccceeeccCCCCCCCCC
Q psy5637 116 -------PKYKWKSDLSQDIVSGVTIAVVHI--------P----------QASSKFGLKE-NYHITTVGYIPTGFPVPEV 169 (335)
Q Consensus 116 -------p~~~~~~n~~~~~ig~~~l~iL~~--------P----------~is~~~~~~~-~~~v~ivG~Ip~glp~~~~ 169 (335)
+++....|+.+++++++++++++. | .++|.++++. ++| +++|++|+++|.+.+
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~lg~~~l~il~~~~~~~~~~P~~liaiv~~t~i~~~~~~~~~~~G-~i~~~lp~~~~~~~~ 239 (554)
T COG0659 161 WAKVSALFTVLLTINLATLLLGLLTLAILLFLPRLTPRIPSPLIALVLGTLIVWIFPLDSLRYG-EIPGSLPSGLPHFRL 239 (554)
T ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHHHHccchhhhCCcHHHHHHHHHHHHHHhcCCchhcc-cCcccCCcCCCcccC
Confidence 122234489999999999999998 3 5678888865 588 899999999999999
Q ss_pred CCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCc
Q psy5637 170 PPLW--LLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGG 247 (335)
Q Consensus 170 P~~~--~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~ 247 (335)
|+++ .+.+++++++++++++++|++++++++++++|+++|+||||+|||++|++++||||+|++|+++||++|.++||
T Consensus 240 P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~~~d~nrELiaqGiaNi~sglfgg~p~~g~~srS~~nv~sGa 319 (554)
T COG0659 240 PNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGTKHDSNRELIAQGIANIASGLFGGIPATGSISRSAINIKSGA 319 (554)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHhhHHHHHHHHhCCccccchhHHHHHHHHhCC
Confidence 9875 58899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHhhCCCCCccchhhhhhhhhhhcccccchhhHHHHHH-HHhccccchhHHHHH
Q psy5637 248 QTQLASGISCGCLAIVLLYVGPFFQPLPHGFSNIFASFFSCVPFAASLSRSLIQ-LQTGGQTQLASGVSC 316 (335)
Q Consensus 248 ~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~-~~~g~ktq~a~~~~~ 316 (335)
|||+|++++++++++++++++|++++||+++|+.+. -...++...|....+ .+.-.|.++.-++.+
T Consensus 320 rT~lsgi~~a~~lll~l~~~~~~~~~IP~a~Laavl---i~v~~~l~~~~~~~~~~~~~~~~e~~v~~~t 386 (554)
T COG0659 320 RTRLSGIIHAALLLLLLLFLAPLVSYIPLAALAAVL---ILVGWGLLDWSLLKPLLRKLPRGELLVLLTT 386 (554)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH---HHHHHHhccHHHHHHHHhcCCchhHHHHHHH
Confidence 999999999999999999999999999999999333 223333344444444 233455554433333
No 3
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=100.00 E-value=2.7e-43 Score=362.96 Aligned_cols=255 Identities=26% Similarity=0.420 Sum_probs=212.4
Q ss_pred cccccccCCCCccccchhhHHhHHHHhhhcccchhhh-------------------------------------------
Q psy5637 52 PILDWLPKYKWKSDLSQDIVSGVTIAVVHIPQGVVEW------------------------------------------- 88 (335)
Q Consensus 52 P~~~Wl~~Y~~~~~l~~D~iAGltv~~~~iPq~mAya------------------------------------------- 88 (335)
|+++|+|+|+ ++|+++|++||+|+++++|||+||||
T Consensus 1 p~~~wl~~y~-~~~l~~Di~aGltv~~~~iP~~~ayA~laglpp~~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~ 79 (563)
T TIGR00815 1 PVLRWLPHYR-LKKFKGDLMAGLTVGILLIPQAMAYAILAGLSPIYGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLG 79 (563)
T ss_pred ChhhhhhhCC-HHHhhhHHHHHHHHHHHHHHHHHHHHHHcCCCchhhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHH
Confidence 8999999999 78899999999999999999999996
Q ss_pred -------ccCC--CCchhhhhHHHHHHHHH--------------------------------------hhhc-cC--CCC
Q psy5637 89 -------CKSQ--FSDTQCCNPFSWLVQLF--------------------------------------PILD-WL--PKY 118 (335)
Q Consensus 89 -------~~~~--~~~~~~a~~lallvGi~--------------------------------------~ilG-~l--p~~ 118 (335)
..+. .++.+++.++++++|++ +++| +. ++.
T Consensus 80 ~~v~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~ 159 (563)
T TIGR00815 80 SVIARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRT 159 (563)
T ss_pred HHHHHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 0011 24567888899999988 3445 32 111
Q ss_pred ------------CCCC---ChhHHHHHHHHHHHHHH----------------h----------HHhhhccccccccccee
Q psy5637 119 ------------KWKS---DLSQDIVSGVTIAVVHI----------------P----------QASSKFGLKENYHITTV 157 (335)
Q Consensus 119 ------------~~~~---n~~~~~ig~~~l~iL~~----------------P----------~is~~~~~~~~~~v~iv 157 (335)
.+.. |+.++++|++++++++. | .++++++. +++++.++
T Consensus 160 ~~~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~-~~~~~~~~ 238 (563)
T TIGR00815 160 DTLGVVISTWAGLPNTHNWNWCTLVIGLVLLLFLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLH-KKQGVSIL 238 (563)
T ss_pred ChHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHcc-CCCCeEEE
Confidence 1223 89999999999988876 2 23455554 57899999
Q ss_pred eccCCCCCCCCCCCCC--chhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhhhhhhcccccccccc
Q psy5637 158 GYIPTGFPVPEVPPLW--LLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPFAAS 235 (335)
Q Consensus 158 G~Ip~glp~~~~P~~~--~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs 235 (335)
|++|+|+|.+..|+++ .+.+++++++++++++++|+++++|.+++++||++|+||||+++|++|+++++|||+|++++
T Consensus 239 g~ip~g~p~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~~~d~n~El~a~G~~N~~~~~fg~~p~~~s 318 (563)
T TIGR00815 239 GHIPSGLSFFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGYKIDANQELVAQGIANIVGSFFSCYPATGS 318 (563)
T ss_pred eecCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHhhHHHHHHHHhCccCCCCc
Confidence 9999999988888765 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhcCcccchhhHHHHHHHHHHHHhhCCCCCccchhhhhhhh--hhhcccccchhhHHHHHHHHhccccchhHH
Q psy5637 236 LSRSLIQLQTGGQTQLASGISCGCLAIVLLYVGPFFQPLPHGFSNIFA--SFFSCVPFAASLSRSLIQLQTGGQTQLASG 313 (335)
Q Consensus 236 ~sRS~vn~~~G~~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ii~--a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~ 313 (335)
++||++|+++|+|||++++++++++++++++++|+++++|+++++.+. ...++.+ |++..+...-.+.++...
T Consensus 319 ~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~~~la~ili~~~~~l~~-----~~~~~~~~~~~~~d~~i~ 393 (563)
T TIGR00815 319 LSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQAALAAIIISAVRGLID-----YKELYKLWKADKMDFVVW 393 (563)
T ss_pred chHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHhcccC-----HHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999999999999999999999999332 3333333 455556666666666543
No 4
>PRK11660 putative transporter; Provisional
Probab=100.00 E-value=6.3e-41 Score=345.74 Aligned_cols=233 Identities=20% Similarity=0.335 Sum_probs=193.4
Q ss_pred hhhhhccccc-----cccCCCCccccchhhHHhHHHHhhhcccchhhh--------------------------ccC---
Q psy5637 46 WLVQLFPILD-----WLPKYKWKSDLSQDIVSGVTIAVVHIPQGVVEW--------------------------CKS--- 91 (335)
Q Consensus 46 ~l~~~~P~~~-----Wl~~Y~~~~~l~~D~iAGltv~~~~iPq~mAya--------------------------~~~--- 91 (335)
.+.++.|.+. |+|+|+ ++|+.+|++||+|+|+++|||+|||| +.+
T Consensus 5 ~~~~~~~~~~~~~~~wl~~y~-~~~l~~D~iAGltv~~~~iPq~mayA~lag~pp~~GLysa~~~~~vyal~Gss~~~~~ 83 (568)
T PRK11660 5 HLFSVRPFSALIDACWKEKYT-AARFTRDLIAGITVGIIAIPLAMALAIASGVPPQYGLYTAAVAGIVIALTGGSRFSVS 83 (568)
T ss_pred hhHhhHhhhhHHHHHHHhcCC-HHhhhHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 4555556665 999999 79999999999999999999999997 000
Q ss_pred CC--------------CchhhhhHHHHHHHHH--------------------------------------hhhc-cCCC-
Q psy5637 92 QF--------------SDTQCCNPFSWLVQLF--------------------------------------PILD-WLPK- 117 (335)
Q Consensus 92 ~~--------------~~~~~a~~lallvGi~--------------------------------------~ilG-~lp~- 117 (335)
+. ...+.+..+++++|++ +++| +.++
T Consensus 84 Gp~a~~~~~~~~~~~~~~~~~~~~~~~l~Gii~~l~gllrlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~ 163 (568)
T PRK11660 84 GPTAAFVVILYPVSQQFGLAGLLVATLMSGIILILMGLARLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHV 163 (568)
T ss_pred ChhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 00 0122334457788877 2334 2211
Q ss_pred -------------CCCCCChhHHHHHHHHHHHHHH--------h----------HHhhhcccccccccceeec-------
Q psy5637 118 -------------YKWKSDLSQDIVSGVTIAVVHI--------P----------QASSKFGLKENYHITTVGY------- 159 (335)
Q Consensus 118 -------------~~~~~n~~~~~ig~~~l~iL~~--------P----------~is~~~~~~~~~~v~ivG~------- 159 (335)
..+..|+.+.++|+++++++++ | ++++++++. +++++++|+
T Consensus 164 ~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~lll~~~~~~~~iP~~li~iiv~t~~~~~~~~~-~~~v~~vg~~~~~~~~ 242 (568)
T PRK11660 164 PEHYLEKVGALFQALPTINWGDALIGIVTLGVLILWPRLKIRLPGHLPALLAGTAVMGVLNLL-GGHVATIGSRFHYVLA 242 (568)
T ss_pred CccHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHhcc-CCCceeeccccccccc
Confidence 1234489999999999998887 3 456677763 577888876
Q ss_pred -------cCCCCCCCCCC-------------CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhh
Q psy5637 160 -------IPTGFPVPEVP-------------PLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGF 219 (335)
Q Consensus 160 -------Ip~glp~~~~P-------------~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~ 219 (335)
+|.++|++.+| +++.+.++++.++++++++++|++++++.+++++++++|+||||+++|+
T Consensus 243 ~g~~~~~ip~~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~~~d~n~EL~a~G~ 322 (568)
T PRK11660 243 DGSQGNGIPPLLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGTKHSANSELVGQGL 322 (568)
T ss_pred ccccccCCCCCCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHhH
Confidence 88888888777 3455778999999999999999999999999999999999999999999
Q ss_pred hhhhhhcccccccccccchhhhhhhcCcccchhhHHHHHHHHHHHHhhCCCCCccchhhhh
Q psy5637 220 SNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGISCGCLAIVLLYVGPFFQPLPHGFSN 280 (335)
Q Consensus 220 aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ 280 (335)
+|++++||||+|++++++||++|.++|+|||++++++++++++++++++|+++++|+++++
T Consensus 323 aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~ll~~iP~~vLa 383 (568)
T PRK11660 323 GNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPLSAMA 383 (568)
T ss_pred HHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999
No 5
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.97 E-value=1.2e-31 Score=252.65 Aligned_cols=160 Identities=33% Similarity=0.549 Sum_probs=146.7
Q ss_pred ChhHHHHHHHHHHHHHH----------------h----------HHhhhcccccccccceeeccCCCCCCCCCC----CC
Q psy5637 123 DLSQDIVSGVTIAVVHI----------------P----------QASSKFGLKENYHITTVGYIPTGFPVPEVP----PL 172 (335)
Q Consensus 123 n~~~~~ig~~~l~iL~~----------------P----------~is~~~~~~~~~~v~ivG~Ip~glp~~~~P----~~ 172 (335)
|+.+.++|+++++++.. | .+++.++. +.++++++|++|.++|++.+| ++
T Consensus 65 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~p~~li~vv~~~~~~~~~~~-~~~~v~~~~~i~~~lp~~~~p~~~~~~ 143 (280)
T PF00916_consen 65 NWPTLAIGLVALVFLLIIRLLPKRLPSRFWPPIPAPLIVVVLGTLLSWLFLL-DKYGVAIVGEIPSGLPPPSLPSFDISW 143 (280)
T ss_pred chhhhhhhhHHHHHHhhhhhhhhhccccccccccccceeeehhhhhhhhhhh-ccccccccccccccCccccCccccccc
Confidence 78888898888887765 2 33455543 678999999999999999999 46
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccchh
Q psy5637 173 WLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLA 252 (335)
Q Consensus 173 ~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~la 252 (335)
+.+.++++.++++++++++|+++++|.++++++|++|+||||+++|++|+++|+|||+|++++++||++|+++|+|||+|
T Consensus 144 ~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~~~d~n~El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~~Ga~t~~s 223 (280)
T PF00916_consen 144 SLILDLLPTALAIAIVGFIESLLIAKSIAKKTGYRIDPNQELIALGLANIVSGLFGGMPGSGSFSRSAVNYRAGARTRLS 223 (280)
T ss_pred ccccccchhHHHHHHHHHHHHHHhhhhhcccccccCCcHHHHHHhhhccccchhhcccccccccccchHHHhcCcceeeh
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhCCCCCccchhhhhhhh
Q psy5637 253 SGISCGCLAIVLLYVGPFFQPLPHGFSNIFA 283 (335)
Q Consensus 253 ~iv~a~~vll~ll~l~~~~~~iP~~~l~ii~ 283 (335)
++++++++++++++++|+++++|+++++.+.
T Consensus 224 ~~~~~~~~l~~l~~~~~~l~~iP~~~La~il 254 (280)
T PF00916_consen 224 GLISALFVLLVLLFLAPLLAYIPKAVLAAIL 254 (280)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999433
No 6
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=99.48 E-value=4.6e-13 Score=133.39 Aligned_cols=112 Identities=14% Similarity=0.227 Sum_probs=94.8
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCc---hhHHHHhhhhhhhhhcccccccccccchh-hhh
Q psy5637 167 PEVPPLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDS---NQELLASGFSNIFASFFSCVPFAASLSRS-LIQ 242 (335)
Q Consensus 167 ~~~P~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~---nqEL~a~G~aNi~ss~fgg~p~~gs~sRS-~vn 242 (335)
+..|+++. ..+...+.++++++.|++...+..+++.|++.|. |||+.++|++|+++++||++|.++ ++++ .++
T Consensus 211 ~~~P~f~~--~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~~~~~~~~~l~~~Gi~~i~aglfG~~p~t~-~~~~~~~~ 287 (406)
T TIGR03173 211 FGAPTFDL--VAILTMIIVYLVSMVETTGDFLALGEITGRPITEKDLAGGLRADGLGSALGGLFNTFPYTS-FSQNVGLV 287 (406)
T ss_pred CCCCeeCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCchhccchHHhccHHHHHHHHhCCCCCcc-hhhhHHHH
Confidence 45666642 2344567799999999999999999998887664 699999999999999999999886 6665 578
Q ss_pred hhcCcccchhhHHHHHHHHHHHHh--hCCCCCccchhhhhh
Q psy5637 243 LQTGGQTQLASGISCGCLAIVLLY--VGPFFQPLPHGFSNI 281 (335)
Q Consensus 243 ~~~G~~T~la~iv~a~~vll~ll~--l~~~~~~iP~~~l~i 281 (335)
..+|++||.+++++++++++..++ ++++++++|+++++.
T Consensus 288 ~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg 328 (406)
T TIGR03173 288 QLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGG 328 (406)
T ss_pred HHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 889999999999999988887776 899999999999993
No 7
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=99.45 E-value=8.7e-13 Score=131.94 Aligned_cols=175 Identities=17% Similarity=0.139 Sum_probs=130.5
Q ss_pred ChhHHHHHHHHHHHHHH-----h----------------HHhhhcccccccccceeeccC-CCCCCCCCCCCCchhHHHH
Q psy5637 123 DLSQDIVSGVTIAVVHI-----P----------------QASSKFGLKENYHITTVGYIP-TGFPVPEVPPLWLLPKLIV 180 (335)
Q Consensus 123 n~~~~~ig~~~l~iL~~-----P----------------~is~~~~~~~~~~v~ivG~Ip-~glp~~~~P~~~~~~~l~~ 180 (335)
|+.+..+|++++++++. | ++++.++..+. +-+.+.| -++|.+..|..+.-...+.
T Consensus 161 ~~~~~~vg~~~l~~~vl~~~~~~g~~~~~aiLigiv~g~i~a~~lg~~~~---~~v~~~~~~~lP~~~~~g~~f~~~~~~ 237 (415)
T TIGR00801 161 SLENLGVAFVVLALIILLNRFGKGFLKSISILIGILVGYILALFMGIVDF---SPVIDAPWFSLPTPFTFGPSFEWPAIL 237 (415)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHcCCccc---hhhccCcccccCCccCCCceecHHHHH
Confidence 56778888888887754 1 33445554221 1123333 2456555442122235666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcccC----chhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccchhhHHH
Q psy5637 181 DGLVIAIIAFSINISMASILAKKMKYKID----SNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGIS 256 (335)
Q Consensus 181 ~a~~iaiv~~~esls~ak~~a~~~~~~id----~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~la~iv~ 256 (335)
..+.++++.++|++...+.++++.|++.| .|||+.+.|++|+++++||++|.++...++.++..+|.++|.+..++
T Consensus 238 ~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t~~sen~g~~~~T~~~sr~~~~~~ 317 (415)
T TIGR00801 238 TMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNTTFAQNIGVIALTRVASRWVIVGA 317 (415)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCcchhhhheeeeecCCCchHHHHHH
Confidence 77889999999999999999999988764 47999999999999999999999999888899999999999999999
Q ss_pred HHHHHHHHHh--hCCCCCccchhhhhhhh-hhhcccccchhhHHHHHHH
Q psy5637 257 CGCLAIVLLY--VGPFFQPLPHGFSNIFA-SFFSCVPFAASLSRSLIQL 302 (335)
Q Consensus 257 a~~vll~ll~--l~~~~~~iP~~~l~ii~-a~~~~~~~~~s~~rt~v~~ 302 (335)
+++++++.++ ++++++.+|.++++.+. ..++.+.. +..|...+.
T Consensus 318 a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~--~gi~~l~~~ 364 (415)
T TIGR00801 318 AVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAA--SGIRILIRN 364 (415)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--HHHHHHHhC
Confidence 9999999999 99999999999999332 33444443 334555443
No 8
>PF13792 Sulfate_tra_GLY: Sulfate transporter N-terminal domain with GLY motif
Probab=99.32 E-value=3.1e-13 Score=106.27 Aligned_cols=40 Identities=53% Similarity=1.069 Sum_probs=38.1
Q ss_pred ccccccccCCCCccccchhhHHhHHHHhhhcccchhhhcc
Q psy5637 51 FPILDWLPKYKWKSDLSQDIVSGVTIAVVHIPQGVVEWCK 90 (335)
Q Consensus 51 ~P~~~Wl~~Y~~~~~l~~D~iAGltv~~~~iPq~mAya~~ 90 (335)
||+++|+|+|+||+|+++|++||+|+|.++|||+||||.-
T Consensus 1 ~P~l~wl~~y~~k~~~~~D~~aGltva~~~iPq~~a~A~l 40 (84)
T PF13792_consen 1 FPILQWLPRYSWKSNLRGDLLAGLTVALVAIPQGMAYALL 40 (84)
T ss_pred CCchhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7999999999988999999999999999999999999943
No 9
>PRK10720 uracil transporter; Provisional
Probab=99.10 E-value=9.8e-10 Score=110.52 Aligned_cols=169 Identities=21% Similarity=0.243 Sum_probs=119.0
Q ss_pred CCChhHHHHHHHHHHHHHH------------h---------HHhhhcccccccccceeecc-CCCCCCCCCCCCCchhHH
Q psy5637 121 KSDLSQDIVSGVTIAVVHI------------P---------QASSKFGLKENYHITTVGYI-PTGFPVPEVPPLWLLPKL 178 (335)
Q Consensus 121 ~~n~~~~~ig~~~l~iL~~------------P---------~is~~~~~~~~~~v~ivG~I-p~glp~~~~P~~~~~~~l 178 (335)
..|+..+.+++++++++++ | ++++.++.. +++.+++- +.++|.+..|+|+.-.
T Consensus 152 ~~~~~~~~lalv~l~iil~~~~~~kg~~~~~~iLigIvvG~ila~~lG~~---d~~~v~~a~~~~lP~~~~P~fd~~~-- 226 (428)
T PRK10720 152 TPDSKTIIISMVTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGMV---DTTPIIEAHWFALPTFYTPRFEWFA-- 226 (428)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHhccHHHHhHHHHHHHHHHHHHHHhcCC---CHHHhhcCccccCCCCCCCcCcHHH--
Confidence 3467788899888887764 2 334444442 23444433 4677888888876421
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCcc----cCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccchhhH
Q psy5637 179 IVDGLVIAIIAFSINISMASILAKKMKYK----IDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASG 254 (335)
Q Consensus 179 ~~~a~~iaiv~~~esls~ak~~a~~~~~~----id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~la~i 254 (335)
+...+..+++.+.|++...+..++..+++ .|.|||+++.|++|+++++||++|.++ ++-|...+++|++++-
T Consensus 227 il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~~p~tt----y~en~g~ia~T~v~sr 302 (428)
T PRK10720 227 ILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTPNTT----YGENIGVMAITRVYST 302 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCCCCccc----cccccceeeecccchh
Confidence 22445566677789988887777765443 477999999999999999999999988 5678888888888885
Q ss_pred H--H-HHHHHHHHHh---hCCCCCccchhhhh-hhhhhhcccccchhhHHHHH
Q psy5637 255 I--S-CGCLAIVLLY---VGPFFQPLPHGFSN-IFASFFSCVPFAASLSRSLI 300 (335)
Q Consensus 255 v--~-a~~vll~ll~---l~~~~~~iP~~~l~-ii~a~~~~~~~~~s~~rt~v 300 (335)
. . +.++++++.+ +++++..+|.++++ +....++.+.. +..|...
T Consensus 303 ~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~--~Gi~~l~ 353 (428)
T PRK10720 303 WVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGA--SGIRVLI 353 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--HHHHHHH
Confidence 5 3 6677777777 88899999999999 33344455444 3334443
No 10
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=98.75 E-value=2.7e-08 Score=100.13 Aligned_cols=126 Identities=13% Similarity=0.159 Sum_probs=99.0
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCc--hhHHHHhhhhhhhhhcccccccccccch
Q psy5637 161 PTGFPVPEVPPLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDS--NQELLASGFSNIFASFFSCVPFAASLSR 238 (335)
Q Consensus 161 p~glp~~~~P~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~--nqEL~a~G~aNi~ss~fgg~p~~gs~sR 238 (335)
.-++|++..|.|+. ..+...+..+++.++|++...+..++..+++.|+ |||+++.|++|++++++|+.|.+ +
T Consensus 233 ~~~lP~~~~p~f~~--~~il~~~~~~lv~~~esiG~~~a~~~~~~~~~~~~i~r~l~adGl~t~~agl~g~~p~t----t 306 (429)
T TIGR03616 233 WFGLPNFHTPVFNA--NAMLLIAPVALILVAENLGHFKAVAGMTGRNLDPYMGRAFVGDGLATMLSGSVGGTGVT----T 306 (429)
T ss_pred cccCCcCCCceEcH--HHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCCCchhccchhhhhHHHHHHHhcCCCCCc----c
Confidence 34677777776653 3344566678899999999999999988888887 79999999999999999988754 4
Q ss_pred hhhhhhcCcccchh--hHHHHHHHHHHHHhhCC----CCCccchhhhh-hhhhhhcccccc
Q psy5637 239 SLIQLQTGGQTQLA--SGISCGCLAIVLLYVGP----FFQPLPHGFSN-IFASFFSCVPFA 292 (335)
Q Consensus 239 S~vn~~~G~~T~la--~iv~a~~vll~ll~l~~----~~~~iP~~~l~-ii~a~~~~~~~~ 292 (335)
++-|...++.|+++ .++....++++++.+.| ++..+|.++++ +....++.+...
T Consensus 307 ~~en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~ 367 (429)
T TIGR03616 307 YAENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVA 367 (429)
T ss_pred eeeeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 46788888999999 46677777788888888 89999999999 333445555553
No 11
>KOG0236|consensus
Probab=98.69 E-value=2.8e-08 Score=105.03 Aligned_cols=64 Identities=41% Similarity=0.778 Sum_probs=63.0
Q ss_pred CccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccCCCC
Q psy5637 272 QPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQPLPH 335 (335)
Q Consensus 272 ~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~lP~ 335 (335)
|++.+|+.|+++++++|++.+++++||++|..+|+|||++++++++++++++++++|+|+++|+
T Consensus 364 ELiAlG~~Ni~sSff~~~p~tgs~sRSav~~~sG~~T~~s~i~~~~~vl~~l~~l~p~f~~iP~ 427 (665)
T KOG0236|consen 364 ELIALGISNILSSFFGCYPTTGSFSRSAVNIKSGGRTQVAGIVSAALVLLALLFLGPLFYYIPK 427 (665)
T ss_pred HHHHHHHHHHhhhhhceEcccchhhHHHHHhhcCCcchHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 8899999999999999999999999999999999999999999999999999999999999995
No 12
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=98.63 E-value=1.2e-07 Score=98.38 Aligned_cols=64 Identities=28% Similarity=0.593 Sum_probs=62.8
Q ss_pred CccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccCCCC
Q psy5637 272 QPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQPLPH 335 (335)
Q Consensus 272 ~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~lP~ 335 (335)
|.+.+|+.|+++++++.++.+++.+||..|.++|+|||++++++++++++++++++|+++++|+
T Consensus 285 ELiaqGiaNi~sglfgg~p~~g~~srS~~nv~sGarT~lsgi~~a~~lll~l~~~~~~~~~IP~ 348 (554)
T COG0659 285 ELIAQGIANIASGLFGGIPATGSISRSAINIKSGARTRLSGIIHAALLLLLLLFLAPLVSYIPL 348 (554)
T ss_pred HHHHhhHHHHHHHHhCCccccchhHHHHHHHHhCCcChHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 7899999999999999999999999999999999999999999999999999999999999995
No 13
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.52 E-value=5.4e-08 Score=91.75 Aligned_cols=64 Identities=28% Similarity=0.555 Sum_probs=62.4
Q ss_pred CccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccCCCC
Q psy5637 272 QPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQPLPH 335 (335)
Q Consensus 272 ~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~lP~ 335 (335)
|.+.+|+.|++++++++++.+++.+||.+|.+.|+|||++++++++++++++++++|+++|+|+
T Consensus 184 El~a~G~aNi~s~~~gg~p~~~s~srs~~~~~~Ga~t~~s~~~~~~~~l~~l~~~~~~l~~iP~ 247 (280)
T PF00916_consen 184 ELIALGLANIVSGLFGGMPGSGSFSRSAVNYRAGARTRLSGLISALFVLLVLLFLAPLLAYIPK 247 (280)
T ss_pred HHHHhhhccccchhhcccccccccccchHHHhcCcceeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7789999999999999999999999999999999999999999999999999999999999995
No 14
>PRK11660 putative transporter; Provisional
Probab=98.30 E-value=4.1e-07 Score=94.65 Aligned_cols=64 Identities=23% Similarity=0.470 Sum_probs=62.2
Q ss_pred CccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccCCCC
Q psy5637 272 QPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQPLPH 335 (335)
Q Consensus 272 ~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~lP~ 335 (335)
|.+.+|+.|++++++++++.+++.+||++|.++|+|||++++++++++++++++++|+++++|+
T Consensus 316 EL~a~G~aNi~~~~fgg~p~~~s~srSa~n~~aGarT~la~iv~a~~~ll~ll~l~~ll~~iP~ 379 (568)
T PRK11660 316 ELVGQGLGNIVAPFFGGITATAAIARSAANVRAGATSPISAVIHALLVLLALLVLAPLLSYLPL 379 (568)
T ss_pred HHHHHhHHHHHHHHhCcccccchHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 7788999999999999999999999999999999999999999999999999999999999995
No 15
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=98.13 E-value=1.5e-06 Score=90.45 Aligned_cols=64 Identities=38% Similarity=0.653 Sum_probs=62.3
Q ss_pred CccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccCCCC
Q psy5637 272 QPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQPLPH 335 (335)
Q Consensus 272 ~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~lP~ 335 (335)
|.+.+|+.|++++++++++.+++.+||.+|.+.|+|||++++++++++++++++++|+++++|+
T Consensus 296 El~a~G~~N~~~~~fg~~p~~~s~srs~~~~~~G~~t~~a~i~~~~~~l~~~l~~~~~l~~iP~ 359 (563)
T TIGR00815 296 ELVAQGIANIVGSFFSCYPATGSLSRTAVNAKAGCRTQLSGVVTAIVVLLVLLVLTPLFYYIPQ 359 (563)
T ss_pred HHHHhhHHHHHHHHhCccCCCCcchHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHhChH
Confidence 7889999999999999999999999999999999999999999999999999999999999995
No 16
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=97.90 E-value=4.7e-05 Score=76.82 Aligned_cols=176 Identities=19% Similarity=0.230 Sum_probs=116.7
Q ss_pred ChhHHHHHHHHHHHHHH------------h---------HHhhhcccccccccceeeccC-CCCCCCCCCCCCchhHHHH
Q psy5637 123 DLSQDIVSGVTIAVVHI------------P---------QASSKFGLKENYHITTVGYIP-TGFPVPEVPPLWLLPKLIV 180 (335)
Q Consensus 123 n~~~~~ig~~~l~iL~~------------P---------~is~~~~~~~~~~v~ivG~Ip-~glp~~~~P~~~~~~~l~~ 180 (335)
+...+.+++.++++.++ | ++++..+.-+ .+-+.+-| -++|.|..+.+..-...+.
T Consensus 172 ~~~~l~la~~tl~~il~~~~f~~g~~~~i~ILiGlv~G~~la~~~G~vd---f~~v~~a~w~~~P~~~~fg~~F~~~ail 248 (451)
T COG2233 172 SLENLGLALVTLLIILLINRFGKGFLRRIPILIGLVVGYLLALFMGMVD---FSGVAEAPWFALPTPFYFGMAFDWGAIL 248 (451)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCCcC---ccccccCceeeCCcccCCCeeecHHHHH
Confidence 66778888888877666 3 2233333211 11122222 1234444432222234556
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcccCc----hhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccchhhHHH
Q psy5637 181 DGLVIAIIAFSINISMASILAKKMKYKIDS----NQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGIS 256 (335)
Q Consensus 181 ~a~~iaiv~~~esls~ak~~a~~~~~~id~----nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~la~iv~ 256 (335)
..+.++++..+|++.--++.++..|++.|. .|-+++-|++.+++++|+++|.+.----.-+-..+|.+||.....+
T Consensus 249 ~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg~~aDGlat~iag~fg~~p~TtfaqNiGvv~lT~v~Sr~V~~~a 328 (451)
T COG2233 249 TMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRGLLADGLATLIAGLFGGFPNTTFAQNIGVVALTGVYSRYVIAGA 328 (451)
T ss_pred HHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccceeeccHHHHHHHhcCCCCCCchhhceeeeeeccCChhHHHHHH
Confidence 677789999999988877777777666665 5568999999999999999998876655566777889999998777
Q ss_pred HHHHHHHHHh--hCCCCCccchhhhh-hhhhhhcccccchhhHHHHHHHH
Q psy5637 257 CGCLAIVLLY--VGPFFQPLPHGFSN-IFASFFSCVPFAASLSRSLIQLQ 303 (335)
Q Consensus 257 a~~vll~ll~--l~~~~~~iP~~~l~-ii~a~~~~~~~~~s~~rt~v~~~ 303 (335)
++++++.-++ ++.+++.+|.++++ +....|+.+.. +--|...+.+
T Consensus 329 avili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~Ia~--sGir~l~~~~ 376 (451)
T COG2233 329 AVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGMIAA--SGIRILIRNK 376 (451)
T ss_pred HHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHHHH--HHHHHHHhcc
Confidence 7655544433 56688999999999 33355666666 4446666654
No 17
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=97.87 E-value=0.0002 Score=72.36 Aligned_cols=163 Identities=15% Similarity=0.110 Sum_probs=104.1
Q ss_pred CCCCC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccc----CchhHHHHhhhhhhhhhcccccccccccchhhh
Q psy5637 167 PEVPP-LWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKI----DSNQELLASGFSNIFASFFSCVPFAASLSRSLI 241 (335)
Q Consensus 167 ~~~P~-~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~i----d~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~v 241 (335)
+..|. |+. ..+...+.++++..+|++..-++.++..+++. +-||-+.+-|++|+++++||++|.+..-.-.-+
T Consensus 231 fG~P~~F~~--~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~laglfg~~p~tt~sqNvGv 308 (433)
T PRK11412 231 LGSGGALEP--GIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIPFSPFVSSIGL 308 (433)
T ss_pred CCCCCccCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHhcCCCCCCchhhhhhh
Confidence 45664 652 33556667778888888777666666655433 557889999999999999999999665555567
Q ss_pred hhhcCcccchhhHHHHHHHHHHHHh--hCCCCCccchhhhhhhh-hhhcccccchhhHHHHHHHHhccccchhHHHHHHH
Q psy5637 242 QLQTGGQTQLASGISCGCLAIVLLY--VGPFFQPLPHGFSNIFA-SFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGC 318 (335)
Q Consensus 242 n~~~G~~T~la~iv~a~~vll~ll~--l~~~~~~iP~~~l~ii~-a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~ 318 (335)
-..+|.++|.....+++++++.-++ ++.++..+|.++++-+. ..++.+.. +-.|...+..-..|.- ..+-.++.
T Consensus 309 i~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~--~Gi~~l~~~~~~~rn~-~ivg~sl~ 385 (433)
T PRK11412 309 LTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLG--SALVFSQQITFTARNI-YRLALPLF 385 (433)
T ss_pred hhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH--HHHHHHHhCCCCcccc-hhhHHHHH
Confidence 7889999999998888766555443 55577899999999333 33344333 3335554433223321 11122233
Q ss_pred HHHHHHHHhh-hccCCC
Q psy5637 319 LAIVLLYVGP-FFQPLP 334 (335)
Q Consensus 319 ~l~~~l~~~~-~~~~lP 334 (335)
+.+......+ +++.+|
T Consensus 386 ~Glg~~~~p~~~~~~~P 402 (433)
T PRK11412 386 VGIFLMALPPVYLQDLP 402 (433)
T ss_pred HHhhHHhCCHHHHHHCh
Confidence 3344334443 777776
No 18
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=97.38 E-value=0.0045 Score=62.36 Aligned_cols=103 Identities=14% Similarity=0.169 Sum_probs=85.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc------ccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCccc
Q psy5637 176 PKLIVDGLVIAIIAFSINISMASILAKKMKY------KIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQT 249 (335)
Q Consensus 176 ~~l~~~a~~iaiv~~~esls~ak~~a~~~~~------~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T 249 (335)
...++..++..++.+.+++.+-...+++.|. --|.+|-+.+-+++-++|+++|.=|.+ ++-.|+...+.|+||
T Consensus 244 ~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~~~~~al~~D~v~t~~ga~~GtS~~t-~yIESaaGva~GgrT 322 (436)
T COG2252 244 AAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMPRIGKALLADSVATVVGALFGTSTVT-AYIESAAGVAAGGRT 322 (436)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCccccchHHHHhHHHHHHHHhcCCcchh-hhhhccccccccccc
Confidence 4566788999999999998888888776532 236789999999999999999987765 455677788999999
Q ss_pred chhhHHHHHHHHHHHHhhCCCCCccchhhhh
Q psy5637 250 QLASGISCGCLAIVLLYVGPFFQPLPHGFSN 280 (335)
Q Consensus 250 ~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ 280 (335)
-++.++.++..++. +|++|+...+|-.+-+
T Consensus 323 Gltavv~g~lFl~~-lf~~Pl~~~vP~~Ata 352 (436)
T COG2252 323 GLTAVVTGLLFLLS-LFFSPLAALVPGYATA 352 (436)
T ss_pred ccHHHHHHHHHHHH-HHHHHHHHhCcHhhhh
Confidence 99999999988877 8999999999965544
No 19
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=97.27 E-value=0.00083 Score=66.84 Aligned_cols=105 Identities=21% Similarity=0.235 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcCc----ccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccch
Q psy5637 176 PKLIVDGLVIAIIAFSINISMASILAKKMKY----KIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQL 251 (335)
Q Consensus 176 ~~l~~~a~~iaiv~~~esls~ak~~a~~~~~----~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~l 251 (335)
...+...+...++...|++..-...++..|. +.+.||-+.+.|++|+++++||+.|.+....-...-...|.+++.
T Consensus 231 ~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~~~~t~~~en~g~i~~t~v~Sr~ 310 (389)
T PF00860_consen 231 PGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGTSPTTTYSENAGGIAATGVASRR 310 (389)
T ss_dssp HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT---EEE-HHHHHHHHHHTB--HH
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcCCCCccccccchhhhhhccccce
Confidence 4556677778888888988777776665443 556889999999999999999998888777777777888899999
Q ss_pred hhHHHHHHHHHHHH--hhCCCCCccchhhhh
Q psy5637 252 ASGISCGCLAIVLL--YVGPFFQPLPHGFSN 280 (335)
Q Consensus 252 a~iv~a~~vll~ll--~l~~~~~~iP~~~l~ 280 (335)
.++.++++.+++.+ .+++++..+|.++++
T Consensus 311 ~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~g 341 (389)
T PF00860_consen 311 VGLTAGVILILFGLSPKFAPLFASIPSPVIG 341 (389)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHTTS-HHHHH
T ss_pred eeeHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 99888877665554 578999999999965
No 20
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=96.90 E-value=0.0029 Score=63.22 Aligned_cols=147 Identities=13% Similarity=0.181 Sum_probs=95.0
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhhhhhhccccccc-----ccccchh
Q psy5637 165 PVPEVPPLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPF-----AASLSRS 239 (335)
Q Consensus 165 p~~~~P~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~-----~gs~sRS 239 (335)
|.+..|+|+ +...+..++...++.......-+-...+.+||+.+.|+-+..-|++|+++++|||++. +.++.-.
T Consensus 212 p~~~~P~fs-~~a~~~l~lPl~~vtm~~qnlpgiavl~aaGy~~p~~~~~~~tGl~sll~ApfGg~~~nlaaitaAic~G 290 (395)
T TIGR00843 212 PQFIAPDFS-FAHSLNLALPLFLVSLAGQFAPGIAALKAAGYNAPAKPIIAAAGLAALFAAFAGGISIGIAAITAAICMG 290 (395)
T ss_pred ceeeCCCCC-HHHHHHHHHHHHHHHHHhcCchHHHHHHHcCCCCCchHHHHHHHHHHHHHhccCCchhhhhHHhHHHhcC
Confidence 455678884 4555666666666665444333344555689999999999999999999999999992 1112222
Q ss_pred hhhhhcCcccchhhHHHHHHHHHHHHh---hCCCCCccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHH
Q psy5637 240 LIQLQTGGQTQLASGISCGCLAIVLLY---VGPFFQPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSC 316 (335)
Q Consensus 240 ~vn~~~G~~T~la~iv~a~~vll~ll~---l~~~~~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~ 316 (335)
.-..+-++|+-.+++..+++.++.-++ +..++..+|++....++++--. +.+..++.+..+..+.+-+.+++-
T Consensus 291 ~~ah~d~~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll----~~~~~~l~~a~~~~~~r~~a~~tf 366 (395)
T TIGR00843 291 KDAHEDKDKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALL----GAIAGNIKIALHEDQERDAALIAF 366 (395)
T ss_pred cccccCcCccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH----HHHHHHHHHHhcCcchhHHHHHHH
Confidence 233344889999999999988887777 4456789999888866654222 222223333334445555554443
No 21
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=96.13 E-value=0.092 Score=57.54 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=79.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc---CcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhc--------
Q psy5637 177 KLIVDGLVIAIIAFSINISMASILAKKM---KYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQT-------- 245 (335)
Q Consensus 177 ~l~~~a~~iaiv~~~esls~ak~~a~~~---~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~-------- 245 (335)
.-+..|+.++++.|.|+-.++....++. ++..--+-+++-+|+.|.++|++|-=+.+|+..||..-.++
T Consensus 656 ~A~iPAlll~ILiFmD~nIts~iv~~~e~kLkKgsgyH~Dllllg~~~~v~sllGLPw~~aatv~S~~Hv~sL~v~~~~~ 735 (900)
T TIGR00834 656 AAALPALLVFILIFMEQQITTLIVSKKERKLKKGSGFHLDLLLVVGMGGVAALFGLPWLSAATVRSVTHANALTVMSKAS 735 (900)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHhcCccccCCCCcccchHHHHHHHHHHHHHhcCCCcccccCCcChhhHhHHeeeeecc
Confidence 4467899999999999987777666542 23334577899999999999999988889998887643322
Q ss_pred --Cc--------ccchhhHHHHHHHHHHHHhhCCCCCccchhhhh
Q psy5637 246 --GG--------QTQLASGISCGCLAIVLLYVGPFFQPLPHGFSN 280 (335)
Q Consensus 246 --G~--------~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ 280 (335)
|. .+|+++++.++.+.+. .+++|.+.+||++||.
T Consensus 736 ~~Ge~~~i~~V~EQRvT~ll~~lLigls-v~~~PvL~~IP~aVL~ 779 (900)
T TIGR00834 736 APGEKAQIQEVREQRVTGLLVAVLVGLS-ILMEPILKRIPLAVLF 779 (900)
T ss_pred CCCCCCccceeEeeehHHHHHHHHHHHH-HHHHHHHhhccHHHHH
Confidence 21 4689999999866554 4478899999999998
No 22
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=95.85 E-value=0.036 Score=54.96 Aligned_cols=149 Identities=15% Similarity=0.150 Sum_probs=104.5
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhhhhhhcccccccccccchhhhhh
Q psy5637 164 FPVPEVPPLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQL 243 (335)
Q Consensus 164 lp~~~~P~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~ 243 (335)
-|.+..|+|+ +..++.-++.+.++.......-+-.+=+.+||+.+.|+-+..-|++|++.++|||++.+=+---.++..
T Consensus 195 ~p~~~~P~Fs-~~a~v~lalPL~ivtmasQnlpG~aVL~a~GY~~p~~~~~~~tGl~s~l~ApfGg~~~nlAaitaAIc~ 273 (378)
T PF03594_consen 195 HPVFTTPEFS-WSALVSLALPLFIVTMASQNLPGIAVLRAAGYQPPVNPLITVTGLASLLAAPFGGHAVNLAAITAAICA 273 (378)
T ss_pred eeEEECCccc-HHHHHHHHHHHHHHHHHhcchHHHHHHHHcCCCCCchHHHHHHHHHHHHHhhhchhhhHHHHHHHHHHc
Confidence 4666788887 677888889999998876666666677789999999999999999999999999998765544444433
Q ss_pred --hcC---cccchhhHHHHHHHHHHHHh---hCCCCCccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHH
Q psy5637 244 --QTG---GQTQLASGISCGCLAIVLLY---VGPFFQPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVS 315 (335)
Q Consensus 244 --~~G---~~T~la~iv~a~~vll~ll~---l~~~~~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~ 315 (335)
+++ .|--++++.++++.+++=++ +..++.-+|....+.++++--.- .+..++.+-.+..+.+.+.++.
T Consensus 274 g~eah~dp~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg----~l~~sl~~A~~~~~~r~aAlvt 349 (378)
T PF03594_consen 274 GPEAHPDPSRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLG----TLGGSLQTAFSDEKYREAALVT 349 (378)
T ss_pred CCccCCCcccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH----HHHHHHHHHhcCcchhHHHHHH
Confidence 344 35567888888877776666 44567889998888776543222 2223333333445555555444
Q ss_pred HH
Q psy5637 316 CG 317 (335)
Q Consensus 316 ~~ 317 (335)
-+
T Consensus 350 Fl 351 (378)
T PF03594_consen 350 FL 351 (378)
T ss_pred HH
Confidence 33
No 23
>KOG1172|consensus
Probab=95.41 E-value=0.2 Score=54.22 Aligned_cols=104 Identities=14% Similarity=0.161 Sum_probs=81.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCc-----
Q psy5637 176 PKLIVDGLVIAIIAFSINISMASILAKKM---KYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGG----- 247 (335)
Q Consensus 176 ~~l~~~a~~iaiv~~~esls~ak~~a~~~---~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~----- 247 (335)
...+..|+.++++-|.|+-.++....++. +...--+=+|+=+|+.|+++|++|-=+.+|+..+|..-.++=+
T Consensus 631 ~~A~ipalll~iLiFmDqqIts~iv~rke~kLKKgsgyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~ 710 (876)
T KOG1172|consen 631 FAALIPALLLTILIFMDQQITAVIVNRKENKLKKGSGYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESET 710 (876)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHhhcccccCCCCcchhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcc
Confidence 44567899999999999987777665543 3344455679999999999999999999999998865443211
Q ss_pred -------------ccchhhHHHHHHHHHHHHhhCCCCCccchhhhh
Q psy5637 248 -------------QTQLASGISCGCLAIVLLYVGPFFQPLPHGFSN 280 (335)
Q Consensus 248 -------------~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ 280 (335)
.+|++|++.++.+. +..++.|.+..||+++|-
T Consensus 711 ~apge~~~i~~V~EQRvtgll~~llvg-ls~~~~pvL~~IP~~VL~ 755 (876)
T KOG1172|consen 711 SAPGEQPQIVGVREQRVTGLLQFLLVG-LSVLLLPVLKLIPMPVLY 755 (876)
T ss_pred cCCCCccccccchhhhhHHHHHHHHHH-HHHHHHHHHhhccHHHHH
Confidence 35899999998888 556788999999999996
No 24
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=93.17 E-value=0.026 Score=58.33 Aligned_cols=101 Identities=14% Similarity=0.208 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhc---CcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCc--------
Q psy5637 179 IVDGLVIAIIAFSINISMASILAKKM---KYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGG-------- 247 (335)
Q Consensus 179 ~~~a~~iaiv~~~esls~ak~~a~~~---~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~-------- 247 (335)
+..|+.++++-|.|+-..+....++. ++..--+-+|+-+|+.|.++|++|-=..+|+..||....++=.
T Consensus 339 ~~palll~iL~F~DqnIts~ivn~~e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~~Hv~sL~~~~~~~~p 418 (510)
T PF00955_consen 339 IIPALLLTILFFMDQNITSLIVNRPENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSPMHVRSLAVESETSAP 418 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhHhHHHhCChhhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCHHHhCcccEEeccccC
Confidence 45588889999998876666554432 2233345679999999999999998778888888765443322
Q ss_pred ----------ccchhhHHHHHHHHHHHHhhCCCCCccchhhhh
Q psy5637 248 ----------QTQLASGISCGCLAIVLLYVGPFFQPLPHGFSN 280 (335)
Q Consensus 248 ----------~T~la~iv~a~~vll~ll~l~~~~~~iP~~~l~ 280 (335)
.+|+++++..+.+.+.+ ++.|++..||++++.
T Consensus 419 Ge~~~i~~V~EqRvT~l~~~~Ligls~-~l~pvL~~IP~~VL~ 460 (510)
T PF00955_consen 419 GEKPKIVGVREQRVTGLLVHLLIGLSL-FLLPVLKLIPMPVLY 460 (510)
T ss_dssp -------------------------------------------
T ss_pred CCCCeeCeEEEecccHHHHHHHHHHHH-HHHHHHHHhhHHHHH
Confidence 46899999888665544 678999999999988
No 25
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=91.56 E-value=0.21 Score=49.99 Aligned_cols=63 Identities=13% Similarity=0.293 Sum_probs=50.7
Q ss_pred ccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHH--HhhhccCCCC
Q psy5637 273 PLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLY--VGPFFQPLPH 335 (335)
Q Consensus 273 ~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~--~~~~~~~lP~ 335 (335)
.+..|+.|+++++++.++.+........+..+|++++++++++++++++..++ +++++.++|+
T Consensus 259 l~~~Gi~~i~aglfG~~p~t~~~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~ 323 (406)
T TIGR03173 259 LRADGLGSALGGLFNTFPYTSFSQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQ 323 (406)
T ss_pred HHhccHHHHHHHHhCCCCCcchhhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 35668888999999999987644445566778999999998888888777665 8999999984
No 26
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=86.06 E-value=0.39 Score=48.34 Aligned_cols=62 Identities=13% Similarity=0.206 Sum_probs=55.0
Q ss_pred cchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHH--HhhhccCCCC
Q psy5637 274 LPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLY--VGPFFQPLPH 335 (335)
Q Consensus 274 iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~--~~~~~~~lP~ 335 (335)
+..|+.|+++++++.++.+....+..+...++.+++++...+++++++..++ +++++..+|+
T Consensus 276 ~adGl~~i~aglfG~~p~t~~sen~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~ 339 (415)
T TIGR00801 276 LADGLATLLAGLFGGFPNTTFAQNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPS 339 (415)
T ss_pred HHhhHHHHHHHhcCCCCCcchhhhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 3447777999999999999988888888889999999999999999999999 9999999994
No 27
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=80.63 E-value=1.9 Score=42.66 Aligned_cols=144 Identities=13% Similarity=0.160 Sum_probs=91.4
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhhhhhhcccccccccccchhhhhh-
Q psy5637 165 PVPEVPPLWLLPKLIVDGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQL- 243 (335)
Q Consensus 165 p~~~~P~~~~~~~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~- 243 (335)
|.+..|+|+ +..++.-++.+.++.+...-.-+-.+=+-+||+.+++.-+.+-|+..+.++.||++..+=.----++..
T Consensus 211 p~~v~P~Fs-~~A~l~lalPL~lvtmasQN~pGiAvLka~gY~pp~~pl~~~TGl~sll~ApfG~~t~nLaAItAAic~g 289 (402)
T COG3135 211 PTWVTPEFS-FAAMLSLALPLFLVTMASQNLPGIAVLKAAGYQPPPSPLIVATGLASLLSAPFGGHTVNLAAITAAICTG 289 (402)
T ss_pred ceeeCCccc-HHHHHHHhHHHHHHHHHhccCccceeehhcCCCCCCchHHHHhHHHHHHhcccccceecHHHHHHHHhcC
Confidence 455556665 467777888888888765544444445568999999999999999999999999986543222222211
Q ss_pred ----hcCcccchhhHHHHHHHHHHHHhhCC---CCCccchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHH
Q psy5637 244 ----QTGGQTQLASGISCGCLAIVLLYVGP---FFQPLPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASG 313 (335)
Q Consensus 244 ----~~G~~T~la~iv~a~~vll~ll~l~~---~~~~iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~ 313 (335)
.--+|--.++++++++-+++=+|.+- ++.-+|+.....+++.- -.+++..++.+-.+..+++-+.+
T Consensus 290 pdaHpD~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLA----Llg~~~~~l~~A~~~~~~R~aAl 362 (402)
T COG3135 290 PDAHPDPARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLA----LLGTLGNSLQAALKDEREREAAL 362 (402)
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHH----HHHHHHHHHHHHhcCcccchhhh
Confidence 11235567778888777777666443 45667887766555432 22344444544444455554443
No 28
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=66.68 E-value=1.5e+02 Score=30.00 Aligned_cols=99 Identities=11% Similarity=0.074 Sum_probs=61.5
Q ss_pred CcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCcccch--hhHHHHHHHHHHHHhhCCCC--Cccchhhhh
Q psy5637 205 KYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQL--ASGISCGCLAIVLLYVGPFF--QPLPHGFSN 280 (335)
Q Consensus 205 ~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T~l--a~iv~a~~vll~ll~l~~~~--~~iP~~~l~ 280 (335)
+...|-|+-+....+=|++++.+||--.++|-.--.+... =+|-|+ ..+.++++++++-++.-|.- -+=|.=..+
T Consensus 318 kvlMnvDDTm~~~siRQ~vGs~lGGgN~~SsWgTymIPaa-IaKRPIpggAiLtg~~Ci~~av~GyPMdlavw~Pvl~vA 396 (492)
T PF11840_consen 318 KVLMNVDDTMTMCSIRQIVGSILGGGNIASSWGTYMIPAA-IAKRPIPGGAILTGLLCIVAAVWGYPMDLAVWPPVLRVA 396 (492)
T ss_pred ceeecccchhHHHHHHHHHhhcccCCcccccchhhhhhHH-HhcCCCCchHHHHHHHHHHHHHhcCcchhhhcccHHHHH
Confidence 3456788888888999999999999877777655444333 334433 45788888888888777743 333332223
Q ss_pred -hhhhhhcccccchhhHHHHHHHHh
Q psy5637 281 -IFASFFSCVPFAASLSRSLIQLQT 304 (335)
Q Consensus 281 -ii~a~~~~~~~~~s~~rt~v~~~~ 304 (335)
+++-|.-+.......+|.-.+.++
T Consensus 397 LlvGVflPLleAGmqm~r~~k~sqs 421 (492)
T PF11840_consen 397 LLVGVFLPLLEAGMQMTRKGKTSQS 421 (492)
T ss_pred HHHHHHHHHHHHHHHHHhcCCccce
Confidence 333444555555555555444333
No 29
>PRK12600 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=49.90 E-value=32 Score=27.55 Aligned_cols=33 Identities=21% Similarity=0.229 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccC
Q psy5637 177 KLIVDGLVIAIIAFSINISMASILAKKMKYKID 209 (335)
Q Consensus 177 ~l~~~a~~iaiv~~~esls~ak~~a~~~~~~id 209 (335)
..+..++.+|+++|+.+++.||-+.++.-.+-|
T Consensus 59 ~~ldvalvlAll~Fv~tva~Aryl~~g~~~~~~ 91 (94)
T PRK12600 59 AYLEVILLIGILAFIGTAAFSKFIEKGKVIERD 91 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCC
Confidence 356789999999999999999998765433333
No 30
>KOG1292|consensus
Probab=42.30 E-value=38 Score=35.06 Aligned_cols=98 Identities=14% Similarity=0.208 Sum_probs=61.0
Q ss_pred HHHHHHHHHHH----HHHHHHHhhcCcccCchhHHHHhhhhhhhhhcccccccccccchhhhhhhcCccc----chhhHH
Q psy5637 184 VIAIIAFSINI----SMASILAKKMKYKIDSNQELLASGFSNIFASFFSCVPFAASLSRSLIQLQTGGQT----QLASGI 255 (335)
Q Consensus 184 ~iaiv~~~esl----s~ak~~a~~~~~~id~nqEL~a~G~aNi~ss~fgg~p~~gs~sRS~vn~~~G~~T----~la~iv 255 (335)
+-++++.+|++ +.+|....+.=.+..-||-..-+|++-+.+++||.-.++...+. |+..=+-| |..--+
T Consensus 277 aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL~gl~G~gtG~Tt~~E---Nigll~vTKVgSRrvvQ~ 353 (510)
T KOG1292|consen 277 AASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLLAGLFGTGTGSTTSVE---NIGLLGVTKVGSRRVVQI 353 (510)
T ss_pred HHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHHHHhhCCCccceeecc---ceeeEeeeeeeeeeehhh
Confidence 34556677774 45555555555678889999999999999999997655443322 22221223 223334
Q ss_pred HHHHHHHHHHh--hCCCCCccchhhhhhhhh
Q psy5637 256 SCGCLAIVLLY--VGPFFQPLPHGFSNIFAS 284 (335)
Q Consensus 256 ~a~~vll~ll~--l~~~~~~iP~~~l~ii~a 284 (335)
++.++++.-.+ ++-+|..||.++.+.+-.
T Consensus 354 aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c 384 (510)
T KOG1292|consen 354 AAGFMIFFGIFGKFGAFFASIPDPIVGGLLC 384 (510)
T ss_pred hHHHHHHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 44544443333 677899999998884433
No 31
>PRK10720 uracil transporter; Provisional
Probab=39.95 E-value=21 Score=36.19 Aligned_cols=58 Identities=21% Similarity=0.328 Sum_probs=42.8
Q ss_pred cchhhhhhhhhhhcccccchhhHHHHHHHHhccccchhHHH--H-HHHHHHHHHH---HhhhccCCCC
Q psy5637 274 LPHGFSNIFASFFSCVPFAASLSRSLIQLQTGGQTQLASGV--S-CGCLAIVLLY---VGPFFQPLPH 335 (335)
Q Consensus 274 iP~~~l~ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~--~-~~~~l~~~l~---~~~~~~~lP~ 335 (335)
+..|+.|+++++++..+.+. ..-|....+.|++++-. . +.++++++.+ +++++..+|.
T Consensus 267 ~adGlatii~glfG~~p~tt----y~en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~ 330 (428)
T PRK10720 267 FANGLSTVISGFFGSTPNTT----YGENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPL 330 (428)
T ss_pred hhhhHHHHHHHhcCCCCccc----cccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 44577779999999998766 44555677778877766 3 6667777777 7888888884
No 32
>PRK12657 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=39.61 E-value=54 Score=26.61 Aligned_cols=28 Identities=21% Similarity=0.390 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5637 177 KLIVDGLVIAIIAFSINISMASILAKKM 204 (335)
Q Consensus 177 ~l~~~a~~iaiv~~~esls~ak~~a~~~ 204 (335)
..+..++.+|+++|+.+++.||-+.++.
T Consensus 63 ~~ldvaLvlAll~Fv~tva~ARyl~~g~ 90 (100)
T PRK12657 63 SFLDSIMLIAIISFVSSVSISRFIGGGH 90 (100)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3577899999999999999999987654
No 33
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=29.38 E-value=48 Score=33.89 Aligned_cols=52 Identities=19% Similarity=0.364 Sum_probs=40.8
Q ss_pred hhhhhhcccccchhhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccCCC
Q psy5637 281 IFASFFSCVPFAASLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQPLP 334 (335)
Q Consensus 281 ii~a~~~~~~~~~s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~lP 334 (335)
++++.++.-+ ....-.+......|+||.+..++.+++-++. ++++|+...+|
T Consensus 296 ~~ga~~GtS~-~t~yIESaaGva~GgrTGltavv~g~lFl~~-lf~~Pl~~~vP 347 (436)
T COG2252 296 VVGALFGTST-VTAYIESAAGVAAGGRTGLTAVVTGLLFLLS-LFFSPLAALVP 347 (436)
T ss_pred HHHHhcCCcc-hhhhhhcccccccccccccHHHHHHHHHHHH-HHHHHHHHhCc
Confidence 4445444443 3456677778899999999999998888888 99999999998
No 34
>PF04066 MrpF_PhaF: Multiple resistance and pH regulation protein F (MrpF / PhaF); InterPro: IPR007208 Members of the PhaF/MrpF family are predicted to be integral membrane proteins with three transmembrane regions, involved in regulation of pH. PhaF is part of a potassium efflux system involved in pH regulation. It is also involved in symbiosis in Rhizobium meliloti (Sinorhizobium meliloti) []. MrpF is a part of a Na+/H+ antiporter complex, also involved in pH homeostasis. MrpF is thought to be an efflux system for Na+ and cholate []. The Mrp system in Gram-positive species may also have primary energisation capacities [].; GO: 0015075 ion transmembrane transporter activity, 0034220 ion transmembrane transport, 0016021 integral to membrane
Probab=27.04 E-value=1.1e+02 Score=21.83 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy5637 177 KLIVDGLVIAIIAFSINISMASILA 201 (335)
Q Consensus 177 ~l~~~a~~iaiv~~~esls~ak~~a 201 (335)
..+..++.+++++|+.+++.+|-+.
T Consensus 30 ~~lDialv~all~Fvgtva~arfl~ 54 (55)
T PF04066_consen 30 FYLDIALVYALLGFVGTVAFARFLE 54 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566789999999999999999764
No 35
>PF12911 OppC_N: N-terminal TM domain of oligopeptide transport permease C
Probab=25.16 E-value=1.4e+02 Score=20.63 Aligned_cols=38 Identities=13% Similarity=0.182 Sum_probs=21.6
Q ss_pred hhHHHHHHHHhccccchhHHHHHHHHHHHHHHHhhhccC
Q psy5637 294 SLSRSLIQLQTGGQTQLASGVSCGCLAIVLLYVGPFFQP 332 (335)
Q Consensus 294 s~~rt~v~~~~g~ktq~a~~~~~~~~l~~~l~~~~~~~~ 332 (335)
+.|+...+....-|.-+.|++.. ++++++.+++|++.+
T Consensus 3 s~~~~~~~~f~~nk~a~~gl~il-~~~vl~ai~~p~~~p 40 (56)
T PF12911_consen 3 SPWKDAWRRFRRNKLAVIGLIIL-LILVLLAIFAPFISP 40 (56)
T ss_pred CHHHHHHHHHHhCchHHHHHHHH-HHHHHHHHHHHHcCC
Confidence 45566666655566666664433 344555566777654
No 36
>PRK12599 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=23.10 E-value=1.5e+02 Score=23.48 Aligned_cols=28 Identities=18% Similarity=0.248 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5637 177 KLIVDGLVIAIIAFSINISMASILAKKM 204 (335)
Q Consensus 177 ~l~~~a~~iaiv~~~esls~ak~~a~~~ 204 (335)
..+..++.+++++|+.+++.||-+.++.
T Consensus 61 ~~~dvalvlall~Fvgtva~Aryl~~~~ 88 (91)
T PRK12599 61 LYLDIAIVYALLSFLGTVAIAKYLVGRG 88 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 3567799999999999999999987754
No 37
>COG4802 FtrB Ferredoxin-thioredoxin reductase, catalytic subunit [Energy production and conversion]
Probab=22.13 E-value=68 Score=26.24 Aligned_cols=21 Identities=24% Similarity=0.472 Sum_probs=18.2
Q ss_pred HHHHHhhcCcccCchhHHHHh
Q psy5637 197 ASILAKKMKYKIDSNQELLAS 217 (335)
Q Consensus 197 ak~~a~~~~~~id~nqEL~a~ 217 (335)
+...|+|.||++++++|+.+.
T Consensus 13 ~eq~AeksG~~lnpD~e~~~~ 33 (110)
T COG4802 13 TEQYAEKSGYRLNPDREFTAE 33 (110)
T ss_pred HHHHHHhcCceeCCCHHHHHH
Confidence 466889999999999998875
No 38
>COG0573 PstC ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]
Probab=21.78 E-value=7.6e+02 Score=24.16 Aligned_cols=196 Identities=15% Similarity=0.199 Sum_probs=88.6
Q ss_pred ccccc-----CCCCccccchhhHHhHHHHhhhcccchhhh--ccC-CCC-ch--hhhhHHHHHH-------HHH------
Q psy5637 54 LDWLP-----KYKWKSDLSQDIVSGVTIAVVHIPQGVVEW--CKS-QFS-DT--QCCNPFSWLV-------QLF------ 109 (335)
Q Consensus 54 ~~Wl~-----~Y~~~~~l~~D~iAGltv~~~~iPq~mAya--~~~-~~~-~~--~~a~~lallv-------Gi~------ 109 (335)
.+|=| +|-....+.+-++--+.--++++|-|++.| ..+ -.. .. .+..++=+++ |++
T Consensus 64 ~~W~p~~~~~~~G~l~~i~GTli~s~iA~liAvP~gi~~Aifl~E~~~p~~~r~~l~~~iElLAgIPSVVYG~fgl~vl~ 143 (310)
T COG0573 64 TEWNPTNAQPQYGALPPIAGTLITSLIALLIAVPVGIGTAIFLSEYAPPRRLRRVLKPAIELLAGIPSVVYGFFGLFVLA 143 (310)
T ss_pred CccCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcCcHHHHHHHHHHHHHHhcCChhHHHHHHHHHHH
Confidence 35666 344444455666666677788999999998 111 111 01 1112222233 222
Q ss_pred hhhcc-CC----CCCCCCChhHHHHHHHHHHHHHHhHHhhhcccccccccceeeccCCCC----CCCCCCCCCchhHHHH
Q psy5637 110 PILDW-LP----KYKWKSDLSQDIVSGVTIAVVHIPQASSKFGLKENYHITTVGYIPTGF----PVPEVPPLWLLPKLIV 180 (335)
Q Consensus 110 ~ilG~-lp----~~~~~~n~~~~~ig~~~l~iL~~P~is~~~~~~~~~~v~ivG~Ip~gl----p~~~~P~~~~~~~l~~ 180 (335)
+++.+ ++ ++.+. +-.+++.+.+-+.+|++|.++..-. | ..-.+|..+ -....-+++.+.+++.
T Consensus 144 P~l~~~~~~~~~~~~~~-~g~~~L~a~ivL~IMIiP~i~Sls~--d-----a~~~VP~~lreas~aLGaTkweti~kVil 215 (310)
T COG0573 144 PFLRDVFGPPLGFNLGP-FGISILTAGIVLAIMILPTIASLSR--D-----ALRAVPRSLREAAYALGATKWETIRKVIL 215 (310)
T ss_pred HHHHHHhcccchhcccc-ccchHHHHHHHHHHHHHHHHHHHHH--H-----HHHhCCHHHHHHHHHcCCCceehhhhhhH
Confidence 22221 11 11111 3357888888889999995443211 0 011223211 1122334555554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCcccCchhHHHHhhhhh-hhhhcccccccccccchhhhhhhcCcccchhhHHHHHH
Q psy5637 181 DGLVIAIIAFSINISMASILAKKMKYKIDSNQELLASGFSN-IFASFFSCVPFAASLSRSLIQLQTGGQTQLASGISCGC 259 (335)
Q Consensus 181 ~a~~iaiv~~~esls~ak~~a~~~~~~id~nqEL~a~G~aN-i~ss~fgg~p~~gs~sRS~vn~~~G~~T~la~iv~a~~ 259 (335)
.+.--++++. ..+.++|++.+-. --.+..|-+| +-.++|...-.-+|..-....+..++ -+...+++..+
T Consensus 216 paa~~GIv~a-~iLglgRAiGETm-------AV~mv~Gn~~~~~~slf~p~~Tits~ia~~~gea~~~-~~~~aL~~~gl 286 (310)
T COG0573 216 PAARSGIVGA-VILGLGRALGETM-------AVTMVIGNTARIPLSLFSPGTTLTSIIANEFGEASGG-LHTSALFALGL 286 (310)
T ss_pred HhhHHHHHHH-HHHHHHHHHhHHH-------HHHHHhcCcccCCccccCCcccHHHHHHHHhhhccch-hHHHHHHHHHH
Confidence 4333344433 3344455543321 0112222222 33445543222222333333444444 56677777776
Q ss_pred HHHHHHh
Q psy5637 260 LAIVLLY 266 (335)
Q Consensus 260 vll~ll~ 266 (335)
+|.++-+
T Consensus 287 vLfvitl 293 (310)
T COG0573 287 VLFVITL 293 (310)
T ss_pred HHHHHHH
Confidence 6666544
No 39
>PRK06161 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=21.61 E-value=1.8e+02 Score=23.01 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy5637 177 KLIVDGLVIAIIAFSINISMASILAKKM 204 (335)
Q Consensus 177 ~l~~~a~~iaiv~~~esls~ak~~a~~~ 204 (335)
..+..++.+|+++|+.+++.||-+.++.
T Consensus 59 ~~ldvalvlAll~Fl~tva~AR~~~~g~ 86 (89)
T PRK06161 59 IYFEAALLIALLGFVSTVALAKFLLRGE 86 (89)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 3567789999999999999999987653
No 40
>PRK12612 putative monovalent cation/H+ antiporter subunit F; Reviewed
Probab=20.11 E-value=1.9e+02 Score=22.68 Aligned_cols=28 Identities=18% Similarity=0.180 Sum_probs=23.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy5637 176 PKLIVDGLVIAIIAFSINISMASILAKK 203 (335)
Q Consensus 176 ~~l~~~a~~iaiv~~~esls~ak~~a~~ 203 (335)
....-.++.+++++|+.+++.||-+.++
T Consensus 58 ~~~~dvalvlall~FvgTva~Ar~l~~g 85 (87)
T PRK12612 58 SIYYDIALAAGLLGFLGTIAYARIISGG 85 (87)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3456678999999999999999987653
Done!