BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5641
(192 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q70EL4|UBP43_HUMAN Ubiquitin carboxyl-terminal hydrolase 43 OS=Homo sapiens GN=USP43
PE=1 SV=2
Length = 1123
Score = 146 bits (368), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/139 (47%), Positives = 94/139 (67%), Gaps = 17/139 (12%)
Query: 47 PPKP-----LLFANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMS 101
PP P L +G + PG GL+NHGNTCF+NA++QCLS+TD+LAE+ L +Y+
Sbjct: 80 PPGPQPQLQLPAGDGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPG 139
Query: 102 RRNKFNSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQ 161
R EVTEQLA L++++W+ Y P +S +FK + KYG+Q++GN+QHDA
Sbjct: 140 R------------AEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDAL 187
Query: 162 EFLMWLLDKVHEDLNTATK 180
EFL+WLLD+VHEDL +++
Sbjct: 188 EFLLWLLDRVHEDLEGSSR 206
>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 OS=Homo sapiens GN=USP31
PE=2 SV=2
Length = 1352
Score = 145 bits (367), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/125 (54%), Positives = 87/125 (69%), Gaps = 4/125 (3%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGT----KGE 116
GV GLRNHGNTCF+NA LQCLS+T++ AEY L QY+ + + G +GE
Sbjct: 126 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 185
Query: 117 VTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
VTEQLA L++++W+ Y P S FK I+ K QYRGN+QHDAQEFL+WLLD+VHEDLN
Sbjct: 186 VTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQHDAQEFLLWLLDRVHEDLN 245
Query: 177 TATKK 181
+ K+
Sbjct: 246 HSVKQ 250
>sp|Q8BUM9|UBP43_MOUSE Ubiquitin carboxyl-terminal hydrolase 43 OS=Mus musculus GN=Usp43
PE=2 SV=2
Length = 1132
Score = 143 bits (360), Expect = 9e-34, Method: Composition-based stats.
Identities = 62/122 (50%), Positives = 87/122 (71%), Gaps = 12/122 (9%)
Query: 54 ANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGT 113
+G + PG GL+NHGNTCF+NA++QCLS+TD+LAE+ L +Y+ R
Sbjct: 92 GDGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLALGRYRAAPGR----------- 140
Query: 114 KGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
EVTEQLA L++++W+ Y P +S +FK + KYG+Q++GN+QHDA EFL+WLLD+VHE
Sbjct: 141 -AEVTEQLAALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQHDALEFLLWLLDRVHE 199
Query: 174 DL 175
DL
Sbjct: 200 DL 201
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8
PE=1 SV=2
Length = 1080
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 90/145 (62%), Gaps = 10/145 (6%)
Query: 38 LSSNDIRVLPPKPLLFANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYK 97
LS++ IR L P +F G P + GLRN GNTC++N+ILQCL + LA+YF + Y+
Sbjct: 719 LSASQIRNLNP---VF--GGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQ 773
Query: 98 IDMSRRNKFNSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQ 157
D++R N G KGEV E+ +++K++W+ Y FKV I K Q+ G++Q
Sbjct: 774 DDINRSNLL-----GHKGEVAEEFGIIMKALWTGQYRYISPKDFKVTIGKINDQFAGSSQ 828
Query: 158 HDAQEFLMWLLDKVHEDLNTATKKK 182
D+QE L++L+D +HEDLN A +K
Sbjct: 829 QDSQELLLFLMDGLHEDLNKADNRK 853
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 91/175 (52%), Gaps = 27/175 (15%)
Query: 9 GLHNNKSNNMCSTYDHSMSCRRQAYGLVSLSSNDIRVLPPKPLLFANGDKVPGVIGLRNH 68
G+HN+ + + + S +C+ PP P + PG+ GL N
Sbjct: 270 GMHNSGVSRGGAGFSASYNCQE----------------PPSPHI------QPGLCGLGNL 307
Query: 69 GNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQLAVLLKSI 128
GNTCF+N+ LQCLS+T L EYF+ D+Y+ +++R N G KGE+ E A L+K +
Sbjct: 308 GNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPL-----GMKGEIAEAYAELIKQM 362
Query: 129 WSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTATKKKY 183
WS FK + ++ Q+ G Q D+QE L ++LD +HEDLN KK Y
Sbjct: 363 WSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFILDGLHEDLNRVKKKPY 417
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8
PE=1 SV=1
Length = 1118
Score = 113 bits (282), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 92/148 (62%), Gaps = 11/148 (7%)
Query: 38 LSSNDIRVLPPKPLLFANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYK 97
LS++ IR L P +F G P + GLRN GNTC++N+ILQCL + LA+YF + Y+
Sbjct: 757 LSASQIRNLNP---VF--GGSGPALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQ 811
Query: 98 IDMSRRNKFNSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQ 157
D++R N G KGEV E+ +++K++W+ Y FK+ I K Q+ G +Q
Sbjct: 812 DDINRSNLL-----GHKGEVAEEFGIIMKALWTGQYRYISPKDFKITIGKINDQFAGYSQ 866
Query: 158 HDAQEFLMWLLDKVHEDLNTA-TKKKYK 184
D+QE L++L+D +HEDLN A +K+YK
Sbjct: 867 QDSQELLLFLMDGLHEDLNKADNRKRYK 894
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 79/137 (57%), Gaps = 11/137 (8%)
Query: 47 PPKPLLFANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKF 106
PP P + PG+ GL N GNTCF+N+ LQCLS+T L EYF+ D+Y+ +++R N
Sbjct: 292 PPSPHI------QPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPL 345
Query: 107 NSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMW 166
G KGE+ E A L+K +WS FK + ++ Q+ G Q D+QE L +
Sbjct: 346 -----GMKGEIAEAYAELIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAF 400
Query: 167 LLDKVHEDLNTATKKKY 183
+LD +HEDLN KK Y
Sbjct: 401 ILDGLHEDLNRVKKKPY 417
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ LQCLS+T L +YF+ D+Y+ +++R N G KGE+ E
Sbjct: 299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL-----GMKGEIAE 353
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS FK + ++ Q+ G Q D+QE L +LLD +HEDLN
Sbjct: 354 AYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVK 413
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 414 KKPYLELK 421
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ LQCLS+T L +YF+ D+Y+ +++R N G KGE+ E
Sbjct: 299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL-----GMKGEIAE 353
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS FK + ++ Q+ G Q D+QE L +LLD +HEDLN
Sbjct: 354 AYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVK 413
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 414 KKPYLELK 421
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ LQCLS+T L +YF+ D+Y+ +++R N G KGE+ E
Sbjct: 299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPL-----GMKGEIAE 353
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS FK + ++ Q+ G Q D+QE L +LLD +HEDLN
Sbjct: 354 AYAELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVK 413
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 414 KKPYLELK 421
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 109 bits (273), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 53 FANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYG 112
F G+K G+ GL+N GNTCF+N+ LQCL+HT + EYF+ D Y+ D++ +N G
Sbjct: 292 FGKGEKR-GLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQD-YRSDINAKNPL-----G 344
Query: 113 TKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVH 172
+GE+ LL+ +WS N FK + ++ Q+ G NQHD+QE L +LLD +H
Sbjct: 345 MRGELAIAFGELLRKLWSSGQNTVAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLH 404
Query: 173 EDLNTATKKKYKTIK 187
EDLN +K Y K
Sbjct: 405 EDLNKVKRKPYIEAK 419
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/124 (44%), Positives = 77/124 (62%), Gaps = 5/124 (4%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ LQCLS+ L EYF+ ++Y +++ RN G KGE+ E
Sbjct: 254 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPL-----GMKGELAE 308
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K WS + + N FK + + +Q+ G QHD+QE L +LLD +HEDLN
Sbjct: 309 AYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVK 368
Query: 180 KKKY 183
KK+Y
Sbjct: 369 KKEY 372
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ +QCLS+T L EYF+ D+Y+ +++ N G +GE+ +
Sbjct: 285 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPL-----GMRGEIAK 339
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS Y+ FK + ++ Q+ G Q D QE L +LLD +HEDLN
Sbjct: 340 SYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIR 399
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 400 KKPYIQLK 407
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 107 bits (268), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 52 LFANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKY 111
+ G+K G+ GL N GNTCF+N+ LQCL+HT + EYF+ D Y D++R N
Sbjct: 294 ILGKGEK-GGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQD-YSDDINRDNPL----- 346
Query: 112 GTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKV 171
G GE+ LLK +WS N FK + ++ Q+ G NQHD+QE L +LLD +
Sbjct: 347 GMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL 406
Query: 172 HEDLNTATKKKYKTIK 187
HEDLN +K Y +K
Sbjct: 407 HEDLNKVKRKPYIELK 422
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 7/136 (5%)
Query: 52 LFANGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKY 111
+ G+K G+ GL N GNTCF+N+ LQCL+HT + EYF+ D Y D++R N
Sbjct: 293 ILGKGEK-GGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQD-YSDDINRDNPL----- 345
Query: 112 GTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKV 171
G GE+ LLK +WS N FK + ++ Q+ G NQHD+QE L +LLD +
Sbjct: 346 GMCGELAIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGL 405
Query: 172 HEDLNTATKKKYKTIK 187
HEDLN +K Y +K
Sbjct: 406 HEDLNKVKRKPYIELK 421
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 107 bits (266), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ QCLS+T L EYF+ D+Y+ +++ N G +GE+ +
Sbjct: 257 PGLCGLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPL-----GMRGEIAK 311
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS Y+ FK + ++ Q+ G Q D QE L +LLD +HEDLN
Sbjct: 312 SYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIR 371
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 372 KKPYIQLK 379
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ +QCLS+T L EYF+ D+Y+ +++ N G +GE+ +
Sbjct: 286 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL-----GMRGEIAK 340
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS ++ FK + ++ Q+ G Q D QE L +LLD +HEDLN
Sbjct: 341 SYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIR 400
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 401 KKPYIQLK 408
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ +QCLS+T L EYF+ D+Y+ +++ N G +GE+ +
Sbjct: 257 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL-----GMRGEIAK 311
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS ++ FK + ++ Q+ G Q D QE L +LLD +HEDLN
Sbjct: 312 SYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIR 371
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 372 KKPYIQLK 379
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 77/128 (60%), Gaps = 5/128 (3%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ +QCLS+T L EYF+ D+Y+ +++ N G +GE+ +
Sbjct: 286 PGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPL-----GMRGEIAK 340
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K +WS ++ FK + ++ Q+ G Q D QE L +LLD +HEDLN
Sbjct: 341 SYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLDGLHEDLNRIR 400
Query: 180 KKKYKTIK 187
KK Y +K
Sbjct: 401 KKPYIQLK 408
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
Query: 60 PGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTE 119
PG+ GL N GNTCF+N+ LQCLS+ L EYF+ + Y +++ RN G KGE+ E
Sbjct: 306 PGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPL-----GMKGEIAE 360
Query: 120 QLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A L+K WS + + + FK + + +Q+ G QHD+QE L +LLD +HEDLN
Sbjct: 361 AYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVK 420
Query: 180 KKKY 183
KK+Y
Sbjct: 421 KKEY 424
>sp|O60079|UBP12_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp12 PE=1 SV=1
Length = 979
Score = 103 bits (257), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 76/128 (59%), Gaps = 5/128 (3%)
Query: 58 KVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEV 117
+VPG GL N GNTC++N+ LQCL+HT L ++F D++K ++ N G G+V
Sbjct: 306 RVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKNQVNESNPL-----GMGGQV 360
Query: 118 TEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNT 177
A L+KS++S ++ QFK I K+ + G Q D+QEFL +LLD +HEDLN
Sbjct: 361 ASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQQDSQEFLAFLLDGLHEDLNR 420
Query: 178 ATKKKYKT 185
+K Y +
Sbjct: 421 IYQKPYTS 428
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G+ GL+N GNTCF+N+ LQCL+HT L ++F L +Y +++ N G KGE+
Sbjct: 277 GLTGLQNLGNTCFMNSSLQCLAHTPKLVDFF-LGEYSKEINLDNPL-----GMKGEIALA 330
Query: 121 LAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTATK 180
LL+S+W+ + FK + ++ Q+ G NQHD+QE L +LLD +HEDLN
Sbjct: 331 FGDLLRSLWAPGASTVAPRTFKAKLARFAPQFSGFNQHDSQELLAFLLDGLHEDLNRVKN 390
Query: 181 KKYKTIK 187
K Y K
Sbjct: 391 KPYVEAK 397
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 98.6 bits (244), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 83/151 (54%), Gaps = 17/151 (11%)
Query: 45 VLPPKPLLFANGDKV------------PGVIGLRNHGNTCFINAILQCLSHTDILAEYFV 92
++PP P +GD V PG GL N GNTCF+N+++Q LS+T L ++F
Sbjct: 467 MVPPMPHSPVSGDSVEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFH 526
Query: 93 LDQYKIDMSRRNKFNSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQY 152
++ +++ N GT G + AVLL+++W +++ ++ K I+ +Q+
Sbjct: 527 DRSFEAEINYNNPL-----GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQF 581
Query: 153 RGNNQHDAQEFLMWLLDKVHEDLNTATKKKY 183
G QHDAQEF+ +LLD +HEDLN K Y
Sbjct: 582 TGYAQHDAQEFMAFLLDGLHEDLNRIQNKPY 612
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 98.6 bits (244), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 17/151 (11%)
Query: 45 VLPPKPLLFANGDKV------------PGVIGLRNHGNTCFINAILQCLSHTDILAEYFV 92
++PP P +GD V PG GL N GNTCF+N+++Q LS+T L ++F
Sbjct: 506 MVPPMPHSPVSGDSVEEDEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFH 565
Query: 93 LDQYKIDMSRRNKFNSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQY 152
++ +++ N GT G + AVLL+++W ++ ++ K I+ +Q+
Sbjct: 566 DRSFEAEINYNNPL-----GTGGRLAIGFAVLLRALWKGTHQAFQPSKLKAIVASKASQF 620
Query: 153 RGNNQHDAQEFLMWLLDKVHEDLNTATKKKY 183
G QHDAQEF+ +LLD +HEDLN K Y
Sbjct: 621 TGYAQHDAQEFMAFLLDGLHEDLNRIQNKPY 651
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 98.6 bits (244), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 17/151 (11%)
Query: 45 VLPPKPLLFANGDKV------------PGVIGLRNHGNTCFINAILQCLSHTDILAEYFV 92
++PP P +GD V PG GL N GNTCF+N+++Q LS+T L ++F
Sbjct: 509 MVPPMPHSPVSGDSVEEDEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFH 568
Query: 93 LDQYKIDMSRRNKFNSKKYGTKGEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQY 152
++ +++ N GT G + AVLL+++W ++ ++ K I+ +Q+
Sbjct: 569 DRSFEAEINYNNPL-----GTGGRLAIGFAVLLRALWKGTHQAFQPSKLKAIVASKASQF 623
Query: 153 RGNNQHDAQEFLMWLLDKVHEDLNTATKKKY 183
G QHDAQEF+ +LLD +HEDLN K Y
Sbjct: 624 TGYAQHDAQEFMAFLLDGLHEDLNRIQNKPY 654
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 6/123 (4%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G+ GL N GNTCF+N+ +QCL HT A YF D Y +++ +N G GE+
Sbjct: 315 GLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQED-YHQEINWQNPL-----GMVGELALA 368
Query: 121 LAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTATK 180
LL+ +W+ P FK + ++ Q+ G NQHD+QE L +LLD +HEDLN
Sbjct: 369 FGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKH 428
Query: 181 KKY 183
K Y
Sbjct: 429 KPY 431
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 94.4 bits (233), Expect = 4e-19, Method: Composition-based stats.
Identities = 50/123 (40%), Positives = 77/123 (62%), Gaps = 8/123 (6%)
Query: 55 NGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTK 114
N G+ GLRN GNTCF+N+ILQCLS+T L +Y + Y D+S ++ ++
Sbjct: 260 NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTA----- 314
Query: 115 GEVTEQLAVLLKSIWSCSYNPDIS-NQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
+ E+ A L+++IW+ S N +S ++FK I +Y ++ G NQ DAQEFL +LLD +H
Sbjct: 315 --LMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372
Query: 174 DLN 176
++N
Sbjct: 373 EVN 375
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 76/119 (63%), Gaps = 8/119 (6%)
Query: 59 VPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVT 118
V G+ GLRN GNTCF+N+ILQCLS+T L +Y + +QY D++ ++ + +
Sbjct: 15 VQGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRM-------RTALM 67
Query: 119 EQLAVLLKSIWSCSYNPDIS-NQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
+ A L++ +W+ S N +S ++FK I +Y ++ G NQ DAQEFL +LLD +H ++N
Sbjct: 68 SEFAKLIQLLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHGEVN 126
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 92.8 bits (229), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 8/126 (6%)
Query: 55 NGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTK 114
N G+ GLRN GNTCF+N+ILQCLS+T L +Y + Y D+ + ++
Sbjct: 259 NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTA----- 313
Query: 115 GEVTEQLAVLLKSIWSCSYNPDIS-NQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
+ E+ A L+++IW+ S N +S ++FK I +Y ++ G NQ DAQEFL +LLD +H
Sbjct: 314 --LVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 371
Query: 174 DLNTAT 179
++N T
Sbjct: 372 EVNRVT 377
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 55 NGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTK 114
N G+ GLRN GNTCF+N+ILQCLS+T L +Y + Y D+ + ++
Sbjct: 267 NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTA----- 321
Query: 115 GEVTEQLAVLLKSIWSCSYNPDIS-NQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
+ E+ A L+++IW+ S N +S ++FK I +Y ++ G NQ DAQEFL +LLD +H
Sbjct: 322 --LMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHN 379
Query: 174 DLNTATKK 181
++N +
Sbjct: 380 EVNRVAAR 387
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 92.0 bits (227), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/128 (38%), Positives = 76/128 (59%), Gaps = 8/128 (6%)
Query: 55 NGDKVPGVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTK 114
N G+ GLRN GNTCF+N+ILQCLS+T L +Y + Y D+ + ++
Sbjct: 272 NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTA----- 326
Query: 115 GEVTEQLAVLLKSIWSCSYNPDIS-NQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
+ E+ A L+++IW+ S N +S ++FK I +Y ++ G NQ DAQEFL +LLD +H
Sbjct: 327 --LMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 384
Query: 174 DLNTATKK 181
++N +
Sbjct: 385 EVNRVAAR 392
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 58 KVP---GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTK 114
KVP G GL N GNTCF+N+ +QC+S+T L +YF+ ++ +++R N G K
Sbjct: 524 KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPI-----GMK 578
Query: 115 GEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHED 174
G + + L++ +WS + + + I KY ++ G Q D+QE L +LLD +HED
Sbjct: 579 GHMAKCYGDLVQELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQQDSQELLAFLLDGLHED 638
Query: 175 LNTATKKKYKTIK 187
LN +K Y +K
Sbjct: 639 LNRVHEKPYVELK 651
>sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32
PE=1 SV=1
Length = 1604
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 58 KVP---GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTK 114
KVP G GL N GNTCF+N+ +QC+S+T L +YF+ ++ +++R N G K
Sbjct: 726 KVPTEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPI-----GMK 780
Query: 115 GEVTEQLAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHED 174
G + + L++ +WS + + + I KY ++ G Q D+QE L +LLD +HED
Sbjct: 781 GHMAKCYGDLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQQDSQELLAFLLDGLHED 840
Query: 175 LNTATKKKYKTIK 187
LN +K Y +K
Sbjct: 841 LNRVHEKPYVELK 853
>sp|Q9USM5|UBP1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp1 PE=3 SV=1
Length = 849
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 71/124 (57%), Gaps = 6/124 (4%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G+ GL N GN+C++N+ LQC+ HT L +YF+ D Y+ D++ N G G+V
Sbjct: 277 GLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPL-----GMMGKVALS 331
Query: 121 LAVLLKSIWSCSYNPDIS-NQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTAT 179
A LLK I + +S + FK II ++ T + G Q D+QEF+ + LD +HEDLN
Sbjct: 332 YASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQQDSQEFIAFFLDGLHEDLNRIQ 391
Query: 180 KKKY 183
K Y
Sbjct: 392 IKPY 395
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G +GLRN GNTCF+NA+LQCLS T L ++ + ++ ++ G E+TE
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV--------PGGGRAQELTEA 261
Query: 121 LAVLLKSIW---SC-SYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
A ++ ++W SC + NP +F+ + KY + G +Q DAQEFL L++++H ++N
Sbjct: 262 FADVIGALWHPDSCEAVNP---TRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEIN 318
Query: 177 TATKK 181
++
Sbjct: 319 RRGRR 323
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 83.2 bits (204), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G +GLRN GNTCF+NA+LQCLS T L ++ + ++ ++ G E+TE
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV--------PGGGRAQELTEA 261
Query: 121 LAVLLKSIW---SC-SYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
A ++ ++W SC + NP +F+ + KY + G +Q DAQEFL L++++H ++N
Sbjct: 262 FADVIGALWHPDSCEAVNP---TRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEIN 318
Query: 177 TATKK 181
++
Sbjct: 319 RRGRR 323
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G +GLRN GNTCF+NA+LQCLS T L ++ + ++ ++ G E+TE
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEV--------PGGGRAQELTEA 261
Query: 121 LAVLLKSIW---SC-SYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
A ++ ++W SC + NP +F+ + KY + G +Q DAQEFL L++++H ++N
Sbjct: 262 FADVIGALWHPDSCEAVNP---TRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEIN 318
Query: 177 TATKK 181
++
Sbjct: 319 RRGRR 323
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 72/125 (57%), Gaps = 15/125 (12%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G +GLRN GNTCF+NA+LQCLS T L ++ + ++ ++ G E+TE
Sbjct: 210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEV--------PGGGRAQELTEA 261
Query: 121 LAVLLKSIW---SC-SYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
A ++ ++W SC + NP +F+ + KY + G +Q DAQEFL L++++H ++N
Sbjct: 262 FADVIGALWHPDSCEAVNP---TRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLHLEIN 318
Query: 177 TATKK 181
++
Sbjct: 319 RRGRR 323
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP12 PE=1
SV=1
Length = 1254
Score = 82.4 bits (202), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G GL N GNTC++N+ LQCL H L +YF+ D Y+ +++ N G G V
Sbjct: 362 GTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPL-----GYHGYVARA 416
Query: 121 LAVLLKSIW---------SCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKV 171
+ L++ ++ + ++ P + FK I + + + G Q D+QEFL +LLD +
Sbjct: 417 FSDLVQKLFQNRMSIMQRNAAFPPSM---FKSTIGHFNSMFSGYMQQDSQEFLAFLLDSL 473
Query: 172 HEDLNTATKKKY 183
HEDLN KK+Y
Sbjct: 474 HEDLNRIIKKEY 485
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 16/125 (12%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
GV GLRN GNTC++NAILQCL L EYF+ +Y + + EVT
Sbjct: 43 GVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDC----------SEVTTA 92
Query: 121 LAVLLKSIW---SCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNT 177
A L+ +W S +P+I F + + Q DAQEFL+++L+++HE L
Sbjct: 93 FAYLMTDMWLGDSDCVSPEI---FLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKK 149
Query: 178 ATKKK 182
+++
Sbjct: 150 HCRRR 154
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 16/118 (13%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
GV GLRN GNTC++NAILQCL L EYF+ +Y + EV
Sbjct: 42 GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQNDC----------SEVATA 91
Query: 121 LAVLLKSIW---SCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDL 175
A L+ +W S +P+I F+ + + Q DAQEFL+++L+++HE L
Sbjct: 92 FAYLMTDMWLGDSDCVSPEI---FRSALGNLYPAFTKKTQQDAQEFLIYVLNELHEAL 146
>sp|A7TGY3|UBP4_VANPO Ubiquitin carboxyl-terminal hydrolase 4 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=DOA4 PE=3
SV=1
Length = 882
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 68/123 (55%), Gaps = 13/123 (10%)
Query: 62 VIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQL 121
+GL N GN+C++N I+QCL T L++ F+ + Y+ + NS K G+KG + +
Sbjct: 518 TVGLENMGNSCYMNCIIQCLLSTHELSQIFLNNSYE----KHINLNS-KLGSKGVLAKYF 572
Query: 122 AVLLKSIW-SCSY-------NPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
A L+ +++ S+ P QFK+ + ++ N Q D+QEF +LLD +HE
Sbjct: 573 ARLVHTMYREGSFKRPLEKNKPIQPIQFKMACGSINSLFKDNTQQDSQEFCQFLLDGLHE 632
Query: 174 DLN 176
DLN
Sbjct: 633 DLN 635
>sp|Q6FQF0|UBP4_CANGA Ubiquitin carboxyl-terminal hydrolase 4 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DOA4 PE=3 SV=1
Length = 887
Score = 67.0 bits (162), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 65/123 (52%), Gaps = 13/123 (10%)
Query: 62 VIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQL 121
+GL N GN+C+IN I+QC+ T L + F+ Y +++++K G+KG ++
Sbjct: 524 TVGLENMGNSCYINCIIQCIFATTELIKIFLNGTYAKHINKQSKL-----GSKGVLSHNF 578
Query: 122 AVLLKSIWSCSYNPDISN--------QFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHE 173
A LLK ++ + + I QFK+ + ++ +Q D EF +LLD +HE
Sbjct: 579 AKLLKDMYEENSSKKIGKKHGAVKTLQFKMACASVNSLFKDASQQDCLEFCQFLLDGLHE 638
Query: 174 DLN 176
DLN
Sbjct: 639 DLN 641
>sp|P39944|UBP5_YEAST Ubiquitin carboxyl-terminal hydrolase 5 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP5 PE=1 SV=1
Length = 805
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 64/134 (47%), Gaps = 21/134 (15%)
Query: 62 VIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQY----KIDMSRRNKFNSKKYGTKGEV 117
++GL N GN C++N ILQCL T L F+ + Y D SR G+KG +
Sbjct: 445 IVGLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSR---------GSKGLL 495
Query: 118 TEQLAVLLKSIW--SCSYNPDISN------QFKVIIDKYGTQYRGNNQHDAQEFLMWLLD 169
+ A+L+ ++ P++ QFK I Y + Q D QEF +LLD
Sbjct: 496 AKNFAILVNNMHRHGAFTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLD 555
Query: 170 KVHEDLNTATKKKY 183
+HEDLN KK+
Sbjct: 556 GLHEDLNQNGSKKH 569
>sp|Q6GNI6|UB22A_XENLA Ubiquitin carboxyl-terminal hydrolase 22-A OS=Xenopus laevis
GN=usp22-a PE=2 SV=1
Length = 523
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G+ GL N GNTCF+N I+Q L+HT +L ++F+ D++K +M N + +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC----------LVCE 221
Query: 121 LAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVH 172
++ L + +S +P I + ++ + G Q DA EFL+ LD +H
Sbjct: 222 MSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLH 273
>sp|Q6DCJ1|UB22B_XENLA Ubiquitin carboxyl-terminal hydrolase 22-B OS=Xenopus laevis
GN=usp22-b PE=2 SV=2
Length = 523
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 10/112 (8%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G+ GL N GNTCF+N I+Q L+HT +L ++F+ D++K +M N + +
Sbjct: 172 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPNSC----------LVCE 221
Query: 121 LAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVH 172
++ L + +S +P I + ++ + G Q DA EFL+ LD +H
Sbjct: 222 MSTLFQEFYSGHRSPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLH 273
>sp|P36026|UBP11_YEAST Ubiquitin carboxyl-terminal hydrolase 11 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP11 PE=3
SV=1
Length = 717
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
+ GL+N NTC+IN+I+QCL T + + F+ +Y++ + N+ KY + +++
Sbjct: 296 SITGLQNPCNTCYINSIIQCLFGTTLFRDLFLTKKYRLFL------NTNKYPKEVQLSRS 349
Query: 121 LAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYR-GNNQHDAQEFLMWLLDKVHEDLNTAT 179
+ VL K ++ I N+F + K ++Q D QEFL+ +L ++HE+L+
Sbjct: 350 IYVLFKKMYLNGGRAIIPNRFLKMCKKLRPDLNIPDDQQDTQEFLLIVLARIHEELSNEN 409
Query: 180 KKKY 183
KY
Sbjct: 410 VVKY 413
>sp|Q754R5|UBP4_ASHGO Ubiquitin carboxyl-terminal hydrolase 4 OS=Ashbya gossypii (strain
ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
GN=DOA4 PE=3 SV=2
Length = 852
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 34/156 (21%)
Query: 47 PPKPLLFANGDKVPG-------------VIGLRNHGNTCFINAILQCLSHTDILAEYFVL 93
P PL F + K G +GL N GN+C+++ I+QCL T L F+
Sbjct: 459 PDTPLPFTDSIKTLGQQNLTVAVSNLNFSVGLVNCGNSCYMSCIIQCLLGTQELCTMFLN 518
Query: 94 DQYKIDMSRRNKFN-SKKYGTKGEVTEQLAVLLKSIWSCSYNPDI------------SNQ 140
+ Y+ N N + + G+KG + + L+ ++ Y DI Q
Sbjct: 519 NSYQ------NHINLNSRLGSKGLLARYFSQLIHQMYQ--YGKDIRKKMGNEKTAVIPTQ 570
Query: 141 FKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
FK+ + ++ N Q D QEF +LLD +HEDLN
Sbjct: 571 FKIACGSINSSFKDNTQQDCQEFCQFLLDGLHEDLN 606
>sp|B3LGK1|UBP4_YEAS1 Ubiquitin carboxyl-terminal hydrolase 4 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=DOA4 PE=3 SV=1
Length = 926
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 10/120 (8%)
Query: 62 VIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQL 121
+GL N GN+C++N I+QC+ T L + F+ D Y ++ NS K G+KG + +
Sbjct: 561 AVGLENLGNSCYMNCIIQCILGTHELTQIFLDDSY----AKHININS-KLGSKGILAKYF 615
Query: 122 AVLLKSIWSCSYN-----PDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLN 176
A L+ ++ + P +FK+ + ++ +Q D QEF +LLD +HEDLN
Sbjct: 616 ARLVHMMYKEQVDGSKKIPISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLN 675
>sp|A6H8I0|UBP22_DANRE Ubiquitin carboxyl-terminal hydrolase 22 OS=Danio rerio GN=usp22
PE=2 SV=1
Length = 506
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 61 GVIGLRNHGNTCFINAILQCLSHTDILAEYFVLDQYKIDMSRRNKFNSKKYGTKGEVTEQ 120
G+ GL N GNTCF+N I+Q L+HT +L ++F+ D++K +M + + +
Sbjct: 157 GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQ-----------SNSCLVCE 205
Query: 121 LAVLLKSIWSCSYNPDISNQFKVIIDKYGTQYRGNNQHDAQEFLMWLLDKVHEDLNTATK 180
++ L + +S +P I + ++ + G Q DA EFL+ LD +H
Sbjct: 206 MSQLFQEFYSGHRSPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNG 265
Query: 181 KK 182
KK
Sbjct: 266 KK 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,648,183
Number of Sequences: 539616
Number of extensions: 2989769
Number of successful extensions: 6966
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 222
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 6527
Number of HSP's gapped (non-prelim): 316
length of query: 192
length of database: 191,569,459
effective HSP length: 111
effective length of query: 81
effective length of database: 131,672,083
effective search space: 10665438723
effective search space used: 10665438723
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)