Query psy5645
Match_columns 525
No_of_seqs 425 out of 1536
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 23:01:27 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy5645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/5645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lq6_A Bromodomain-containing 99.6 2.2E-16 7.5E-21 133.3 6.5 72 439-510 9-85 (87)
2 2ku3_A Bromodomain-containing 99.3 1E-12 3.6E-17 106.8 3.3 55 334-388 12-66 (71)
3 2l43_A N-teminal domain from h 99.2 2.4E-12 8.2E-17 108.8 2.2 56 333-388 20-75 (88)
4 1wev_A Riken cDNA 1110020M19; 99.1 2.1E-11 7.2E-16 102.9 3.3 56 333-388 11-72 (88)
5 2yt5_A Metal-response element- 99.1 3.2E-11 1.1E-15 96.0 3.5 54 336-389 4-62 (66)
6 1f62_A Transcription factor WS 98.8 1.7E-09 5.7E-14 81.9 2.9 47 340-388 2-50 (51)
7 2ysm_A Myeloid/lymphoid or mix 98.8 7.2E-09 2.4E-13 90.4 7.3 49 336-386 5-55 (111)
8 4gne_A Histone-lysine N-methyl 98.8 5.9E-09 2E-13 91.1 6.4 72 335-412 12-96 (107)
9 2kwj_A Zinc finger protein DPF 98.8 5.4E-09 1.8E-13 92.0 5.0 48 339-386 2-59 (114)
10 1xwh_A Autoimmune regulator; P 98.7 4E-09 1.4E-13 84.2 3.2 48 336-388 6-55 (66)
11 1mm2_A MI2-beta; PHD, zinc fin 98.7 4.4E-09 1.5E-13 82.8 3.4 48 336-388 7-56 (61)
12 2l5u_A Chromodomain-helicase-D 98.7 5E-09 1.7E-13 82.5 3.4 51 333-388 6-58 (61)
13 2yql_A PHD finger protein 21A; 98.7 7E-09 2.4E-13 80.1 3.8 47 336-387 7-55 (56)
14 3v43_A Histone acetyltransfera 98.7 1.1E-08 3.7E-13 89.8 4.8 50 337-386 4-62 (112)
15 2lri_C Autoimmune regulator; Z 98.7 9.7E-09 3.3E-13 82.2 3.8 48 337-389 11-60 (66)
16 2e6r_A Jumonji/ARID domain-con 98.7 6.1E-09 2.1E-13 88.6 2.6 54 333-388 11-66 (92)
17 2puy_A PHD finger protein 21A; 98.7 7.8E-09 2.7E-13 80.9 3.0 47 337-388 4-52 (60)
18 1fp0_A KAP-1 corepressor; PHD 98.6 2.3E-08 8E-13 84.3 4.5 49 335-388 22-72 (88)
19 2e6s_A E3 ubiquitin-protein li 98.5 7.7E-08 2.6E-12 79.2 4.2 46 340-387 28-76 (77)
20 2vnf_A ING 4, P29ING4, inhibit 98.5 4.1E-08 1.4E-12 77.0 2.4 50 334-387 6-58 (60)
21 3asl_A E3 ubiquitin-protein li 98.5 8.7E-08 3E-12 77.5 3.6 46 340-387 20-68 (70)
22 1wen_A Inhibitor of growth fam 98.4 1.7E-07 5.7E-12 76.1 4.9 54 332-389 10-66 (71)
23 3c6w_A P28ING5, inhibitor of g 98.4 1.1E-07 3.9E-12 74.4 2.5 50 334-387 5-57 (59)
24 3shb_A E3 ubiquitin-protein li 98.4 2.3E-07 7.8E-12 76.4 3.9 46 340-387 28-76 (77)
25 2g6q_A Inhibitor of growth pro 98.3 1.7E-07 5.7E-12 74.1 2.6 51 334-388 7-60 (62)
26 2jmi_A Protein YNG1, ING1 homo 98.3 2.1E-07 7.2E-12 78.8 3.1 50 334-387 22-75 (90)
27 3o36_A Transcription intermedi 98.3 3.8E-07 1.3E-11 86.1 3.8 48 337-389 3-52 (184)
28 3u5n_A E3 ubiquitin-protein li 98.3 3.9E-07 1.3E-11 87.7 3.8 49 337-390 6-56 (207)
29 2kwj_A Zinc finger protein DPF 98.3 3.9E-07 1.3E-11 80.1 3.3 49 337-387 57-107 (114)
30 1weu_A Inhibitor of growth fam 98.2 6.1E-07 2.1E-11 76.2 3.8 53 333-389 31-86 (91)
31 2k16_A Transcription initiatio 98.2 4.5E-07 1.5E-11 73.7 2.6 51 336-388 16-68 (75)
32 3v43_A Histone acetyltransfera 98.2 9.7E-07 3.3E-11 77.3 3.8 54 333-387 56-111 (112)
33 2ro1_A Transcription intermedi 98.1 6.7E-07 2.3E-11 85.2 2.5 47 338-389 2-50 (189)
34 2ysm_A Myeloid/lymphoid or mix 98.1 1.6E-06 5.5E-11 75.5 4.4 51 335-387 51-103 (111)
35 3ask_A E3 ubiquitin-protein li 98.1 1.6E-06 5.6E-11 84.7 3.9 47 339-387 175-224 (226)
36 2lv9_A Histone-lysine N-methyl 98.1 2.9E-06 1E-10 72.7 4.8 48 337-388 27-76 (98)
37 1z3i_X Similar to RAD54-like; 98.0 1.4E-06 4.7E-11 96.6 2.8 63 37-103 1-63 (644)
38 1x4i_A Inhibitor of growth pro 97.9 2.6E-06 9E-11 68.8 2.1 49 336-388 4-55 (70)
39 3o70_A PHD finger protein 13; 97.7 3.5E-05 1.2E-09 61.8 4.3 50 336-388 17-67 (68)
40 1we9_A PHD finger family prote 97.6 4.6E-05 1.6E-09 59.9 3.7 52 336-388 4-58 (64)
41 2rsd_A E3 SUMO-protein ligase 97.5 6.6E-05 2.3E-09 60.0 3.5 50 335-387 7-64 (68)
42 1wew_A DNA-binding family prot 97.4 8.2E-05 2.8E-09 61.0 3.7 51 336-389 14-73 (78)
43 1wee_A PHD finger family prote 97.4 8.2E-05 2.8E-09 60.0 3.6 52 336-389 14-67 (72)
44 2vpb_A Hpygo1, pygopus homolog 97.3 4.3E-05 1.5E-09 60.8 0.9 50 336-386 6-64 (65)
45 1wem_A Death associated transc 97.3 0.0001 3.5E-09 59.9 2.3 54 334-389 11-71 (76)
46 3o7a_A PHD finger protein 13 v 97.2 0.00021 7.2E-09 54.1 3.3 46 340-387 5-51 (52)
47 2ri7_A Nucleosome-remodeling f 97.2 6.4E-05 2.2E-09 69.9 0.3 51 336-388 6-59 (174)
48 2kgg_A Histone demethylase jar 97.1 0.00017 5.9E-09 54.6 2.4 46 340-386 4-52 (52)
49 2lbm_A Transcriptional regulat 97.1 0.00014 4.8E-09 66.4 1.8 46 338-388 63-117 (142)
50 1wep_A PHF8; structural genomi 97.1 0.00026 8.8E-09 58.0 2.8 52 336-388 9-63 (79)
51 2xb1_A Pygopus homolog 2, B-ce 96.9 0.00029 9.8E-09 61.1 2.0 50 339-389 4-62 (105)
52 3ql9_A Transcriptional regulat 96.8 0.0003 1E-08 63.3 1.3 46 338-388 57-111 (129)
53 3kqi_A GRC5, PHD finger protei 96.6 0.00054 1.9E-08 55.6 1.5 49 339-388 10-61 (75)
54 3lqh_A Histone-lysine N-methyl 95.4 0.0054 1.8E-07 58.1 2.1 50 339-388 3-63 (183)
55 3kv5_D JMJC domain-containing 94.6 0.0073 2.5E-07 65.2 0.6 51 337-388 35-88 (488)
56 1wew_A DNA-binding family prot 94.1 0.032 1.1E-06 45.4 3.4 32 445-477 14-47 (78)
57 3kv4_A PHD finger protein 8; e 93.9 0.0075 2.6E-07 64.4 -1.1 49 339-388 5-56 (447)
58 3pur_A Lysine-specific demethy 93.4 0.033 1.1E-06 60.4 2.8 35 353-387 56-93 (528)
59 1we9_A PHD finger family prote 93.0 0.054 1.9E-06 42.1 2.8 29 447-477 6-37 (64)
60 2rsd_A E3 SUMO-protein ligase 93.0 0.05 1.7E-06 43.1 2.6 29 448-477 11-41 (68)
61 2g6q_A Inhibitor of growth pro 92.8 0.055 1.9E-06 42.3 2.5 31 447-478 11-43 (62)
62 1wee_A PHD finger family prote 92.4 0.068 2.3E-06 42.7 2.7 31 445-478 14-47 (72)
63 1wep_A PHF8; structural genomi 92.2 0.086 2.9E-06 42.8 3.1 29 446-477 11-42 (79)
64 3c6w_A P28ING5, inhibitor of g 91.8 0.083 2.8E-06 40.9 2.5 31 447-478 9-41 (59)
65 1wil_A KIAA1045 protein; ring 91.8 0.048 1.6E-06 45.4 1.1 48 337-387 14-75 (89)
66 1wem_A Death associated transc 91.6 0.09 3.1E-06 42.3 2.6 29 446-477 15-45 (76)
67 2vnf_A ING 4, P29ING4, inhibit 90.8 0.12 4.1E-06 40.0 2.5 31 447-478 10-42 (60)
68 4gne_A Histone-lysine N-methyl 90.7 0.27 9.1E-06 42.6 4.8 84 392-509 17-105 (107)
69 3o70_A PHD finger protein 13; 90.6 0.14 4.8E-06 40.7 2.7 29 447-478 19-49 (68)
70 1weu_A Inhibitor of growth fam 90.5 0.16 5.4E-06 42.9 3.1 32 446-478 35-68 (91)
71 1wen_A Inhibitor of growth fam 90.5 0.21 7.3E-06 40.0 3.8 31 447-478 16-48 (71)
72 4bbq_A Lysine-specific demethy 90.5 0.14 4.7E-06 44.2 2.8 73 339-425 8-97 (117)
73 2jmi_A Protein YNG1, ING1 homo 90.4 0.14 4.7E-06 43.1 2.6 31 446-477 25-57 (90)
74 2puy_A PHD finger protein 21A; 89.7 0.17 5.8E-06 38.9 2.4 30 447-479 5-34 (60)
75 2k16_A Transcription initiatio 89.5 0.17 5.7E-06 40.5 2.4 30 447-478 18-49 (75)
76 2yql_A PHD finger protein 21A; 89.5 0.19 6.6E-06 38.1 2.6 30 447-479 9-38 (56)
77 2lv9_A Histone-lysine N-methyl 89.4 0.18 6.3E-06 42.7 2.7 27 449-478 30-58 (98)
78 2lri_C Autoimmune regulator; Z 88.9 0.17 5.7E-06 40.1 1.9 29 448-479 13-41 (66)
79 2l5u_A Chromodomain-helicase-D 88.9 0.21 7.4E-06 38.6 2.5 31 446-479 10-40 (61)
80 1xwh_A Autoimmune regulator; P 88.9 0.22 7.5E-06 39.1 2.6 31 446-479 7-37 (66)
81 2zet_C Melanophilin; complex, 88.8 0.39 1.3E-05 44.1 4.6 91 296-388 12-117 (153)
82 2ri7_A Nucleosome-remodeling f 88.5 0.15 5.2E-06 46.9 1.7 29 446-477 7-38 (174)
83 2kgg_A Histone demethylase jar 88.3 0.27 9.4E-06 36.7 2.7 28 449-477 4-34 (52)
84 1mm2_A MI2-beta; PHD, zinc fin 88.2 0.2 6.9E-06 38.8 2.0 31 446-479 8-38 (61)
85 2xb1_A Pygopus homolog 2, B-ce 87.3 0.34 1.2E-05 41.6 3.0 29 448-477 4-35 (105)
86 3kqi_A GRC5, PHD finger protei 87.0 0.24 8.3E-06 39.8 1.9 27 448-477 11-40 (75)
87 1f62_A Transcription factor WS 86.4 0.3 1E-05 36.1 1.9 29 449-479 2-32 (51)
88 2vpb_A Hpygo1, pygopus homolog 85.8 0.41 1.4E-05 37.7 2.5 29 448-477 9-40 (65)
89 3o7a_A PHD finger protein 13 v 85.5 0.51 1.8E-05 35.2 2.8 26 451-478 7-34 (52)
90 4bbq_A Lysine-specific demethy 84.2 0.31 1.1E-05 42.0 1.3 36 353-388 73-114 (117)
91 2yt5_A Metal-response element- 83.9 0.55 1.9E-05 36.4 2.5 30 448-479 7-40 (66)
92 3asl_A E3 ubiquitin-protein li 83.1 0.61 2.1E-05 37.1 2.4 28 449-478 20-49 (70)
93 1zbd_B Rabphilin-3A; G protein 82.8 1.3 4.3E-05 39.8 4.7 53 336-388 53-107 (134)
94 1x4i_A Inhibitor of growth pro 82.3 0.62 2.1E-05 37.1 2.2 30 448-478 7-38 (70)
95 1v5n_A PDI-like hypothetical p 82.2 0.39 1.3E-05 40.1 1.0 73 297-372 3-78 (89)
96 1fp0_A KAP-1 corepressor; PHD 81.7 0.66 2.2E-05 38.9 2.2 30 447-479 25-54 (88)
97 2e6s_A E3 ubiquitin-protein li 81.2 0.85 2.9E-05 37.0 2.7 29 449-479 28-58 (77)
98 2ku3_A Bromodomain-containing 81.0 0.9 3.1E-05 36.3 2.7 31 447-479 16-50 (71)
99 1wev_A Riken cDNA 1110020M19; 80.7 0.88 3E-05 37.7 2.7 31 447-479 16-50 (88)
100 3o36_A Transcription intermedi 79.0 0.82 2.8E-05 42.5 2.2 29 448-479 5-33 (184)
101 3lqh_A Histone-lysine N-methyl 78.2 1.2 4E-05 42.1 3.0 28 448-477 3-36 (183)
102 1iym_A EL5; ring-H2 finger, ub 77.3 2 6.9E-05 31.1 3.5 35 336-371 3-37 (55)
103 3u5n_A E3 ubiquitin-protein li 76.5 0.98 3.4E-05 42.8 2.0 29 448-479 8-36 (207)
104 2l43_A N-teminal domain from h 75.6 1.1 3.7E-05 37.2 1.8 32 447-480 25-60 (88)
105 2e6r_A Jumonji/ARID domain-con 75.1 1.2 4.1E-05 37.2 1.9 29 448-478 17-47 (92)
106 2d8s_A Cellular modulator of i 74.2 0.92 3.1E-05 36.9 0.9 52 336-388 13-67 (80)
107 1wil_A KIAA1045 protein; ring 73.6 1 3.5E-05 37.5 1.1 34 448-483 16-50 (89)
108 1ptq_A Protein kinase C delta 70.3 2.3 7.8E-05 30.9 2.2 35 337-371 10-44 (50)
109 2yuu_A NPKC-delta, protein kin 70.3 3.5 0.00012 33.4 3.6 38 335-372 25-62 (83)
110 2lbm_A Transcriptional regulat 70.2 2.1 7.3E-05 38.8 2.5 30 447-479 63-92 (142)
111 3kv5_D JMJC domain-containing 70.1 1.6 5.5E-05 47.0 2.0 28 447-477 37-67 (488)
112 3shb_A E3 ubiquitin-protein li 69.9 2.1 7.3E-05 34.7 2.2 29 449-479 28-58 (77)
113 2ro1_A Transcription intermedi 69.8 1.5 5.2E-05 41.2 1.5 29 448-479 3-31 (189)
114 1vyx_A ORF K3, K3RING; zinc-bi 68.5 0.43 1.5E-05 36.8 -2.2 50 336-387 4-55 (60)
115 2ku7_A MLL1 PHD3-CYP33 RRM chi 68.0 1 3.5E-05 38.7 -0.2 35 354-388 1-44 (140)
116 2enn_A NPKC-theta, protein kin 67.1 3.5 0.00012 33.1 2.9 38 335-372 31-68 (77)
117 2enz_A NPKC-theta, protein kin 66.9 3.6 0.00012 31.8 2.9 37 336-372 21-57 (65)
118 1y8f_A UNC-13 homolog A, MUNC1 65.2 4.3 0.00015 31.5 3.0 38 335-372 21-58 (66)
119 3uej_A NPKC-delta, protein kin 64.8 3.3 0.00011 32.0 2.2 36 336-371 18-53 (65)
120 3ask_A E3 ubiquitin-protein li 64.0 2.8 9.6E-05 40.8 2.1 29 449-479 176-206 (226)
121 3nw0_A Non-structural maintena 63.5 6.9 0.00024 38.0 4.8 70 299-372 131-210 (238)
122 3ql9_A Transcriptional regulat 63.3 3.6 0.00012 36.7 2.5 32 446-480 56-87 (129)
123 1weo_A Cellulose synthase, cat 62.2 1.3 4.4E-05 37.2 -0.6 51 337-388 15-67 (93)
124 2eli_A Protein kinase C alpha 62.0 5.7 0.00019 32.4 3.3 37 336-372 26-62 (85)
125 2qfa_C Inner centromere protei 61.4 2.4 8.1E-05 31.3 0.7 21 143-163 24-44 (47)
126 2ct0_A Non-SMC element 1 homol 61.1 3.6 0.00012 33.1 1.9 30 448-479 16-45 (74)
127 1faq_A RAF-1; transferase, ser 61.0 3.5 0.00012 30.2 1.7 32 337-372 13-44 (52)
128 2csz_A Synaptotagmin-like prot 60.1 3.1 0.00011 33.9 1.3 51 335-387 22-72 (76)
129 3a1b_A DNA (cytosine-5)-methyl 59.3 3 0.0001 38.5 1.3 45 339-388 80-134 (159)
130 2fnf_X Putative RAS effector N 58.0 5.9 0.0002 31.5 2.7 33 336-371 33-65 (72)
131 3kv4_A PHD finger protein 8; e 55.6 3.8 0.00013 43.6 1.5 26 450-477 7-35 (447)
132 2ct0_A Non-SMC element 1 homol 55.4 5.4 0.00019 32.0 2.0 32 336-371 13-44 (74)
133 1weq_A PHD finger protein 7; s 54.4 12 0.0004 31.1 3.9 34 353-387 44-78 (85)
134 2vrw_B P95VAV, VAV1, proto-onc 53.4 15 0.00051 37.7 5.5 37 335-371 354-390 (406)
135 3rsn_A SET1/ASH2 histone methy 52.9 10 0.00035 35.5 3.8 53 353-415 18-74 (177)
136 2kiz_A E3 ubiquitin-protein li 52.5 8.8 0.0003 29.0 2.8 36 334-371 10-45 (69)
137 3pfq_A PKC-B, PKC-beta, protei 52.2 5.4 0.00019 44.0 2.1 93 339-477 49-145 (674)
138 3ky9_A Proto-oncogene VAV; cal 52.2 15 0.00053 39.7 5.6 38 335-372 526-563 (587)
139 2db6_A SH3 and cysteine rich d 51.6 2.5 8.6E-05 33.7 -0.5 37 336-372 26-62 (74)
140 3k1l_B Fancl; UBC, ring, RWD, 51.2 7.9 0.00027 40.2 2.9 36 336-371 306-344 (381)
141 4b6d_A RAC GTPase-activating p 50.5 9.5 0.00032 29.4 2.6 34 338-372 19-52 (61)
142 1r79_A Diacylglycerol kinase, 48.8 8.2 0.00028 31.8 2.1 35 338-372 38-73 (84)
143 2ecl_A Ring-box protein 2; RNF 48.7 8 0.00027 30.8 2.0 35 337-371 14-58 (81)
144 3rsn_A SET1/ASH2 histone methy 47.7 9 0.00031 35.9 2.5 26 452-479 9-37 (177)
145 2a20_A Regulating synaptic mem 45.5 16 0.00054 28.4 3.1 51 336-387 7-59 (62)
146 2ecm_A Ring finger and CHY zin 45.4 14 0.00049 26.3 2.8 34 337-371 4-37 (55)
147 1rfh_A RAS association (ralgds 45.3 5.5 0.00019 30.3 0.5 33 336-371 20-52 (59)
148 1e4u_A Transcriptional repress 45.3 7.5 0.00026 31.1 1.4 52 335-388 8-59 (78)
149 2pv0_B DNA (cytosine-5)-methyl 44.9 7 0.00024 40.8 1.4 46 338-388 93-148 (386)
150 2ect_A Ring finger protein 126 38.7 28 0.00096 26.8 3.8 35 335-371 12-46 (78)
151 2ep4_A Ring finger protein 24; 38.3 20 0.00069 27.3 2.9 36 334-371 11-46 (74)
152 3nw0_A Non-structural maintena 38.3 13 0.00043 36.2 2.0 30 448-479 181-210 (238)
153 2ysl_A Tripartite motif-contai 37.7 27 0.00092 26.4 3.5 49 335-388 17-66 (73)
154 1x4j_A Ring finger protein 38; 36.1 14 0.0005 28.4 1.7 34 336-371 21-54 (75)
155 2row_A RHO-associated protein 35.5 12 0.00042 30.8 1.2 37 335-371 32-70 (84)
156 1v5n_A PDI-like hypothetical p 35.4 16 0.00054 30.1 1.9 31 447-479 47-78 (89)
157 1kbe_A Kinase suppressor of RA 34.3 22 0.00074 26.3 2.2 29 339-371 15-43 (49)
158 2yur_A Retinoblastoma-binding 33.0 38 0.0013 26.0 3.7 49 335-387 12-60 (74)
159 2ct2_A Tripartite motif protei 32.8 18 0.00063 28.3 1.8 36 335-371 12-47 (88)
160 2ebr_A Nuclear pore complex pr 32.5 36 0.0012 25.0 3.2 26 374-399 6-34 (47)
161 2lq6_A Bromodomain-containing 29.6 26 0.0009 28.7 2.3 30 339-371 18-49 (87)
162 2ysj_A Tripartite motif-contai 29.0 19 0.00064 26.6 1.2 32 335-371 17-48 (63)
163 2ku7_A MLL1 PHD3-CYP33 RRM chi 28.9 11 0.00038 32.0 -0.2 17 459-477 1-17 (140)
164 3a1b_A DNA (cytosine-5)-methyl 28.4 31 0.0011 31.7 2.8 32 447-479 79-110 (159)
165 3fl2_A E3 ubiquitin-protein li 27.3 12 0.00042 31.8 -0.2 31 336-371 50-80 (124)
166 2d8t_A Dactylidin, ring finger 26.9 44 0.0015 25.3 3.0 47 335-388 12-58 (71)
167 3ng2_A RNF4, snurf, ring finge 26.4 11 0.00039 28.3 -0.5 38 334-371 6-45 (71)
168 3gj5_B Nuclear pore complex pr 26.4 17 0.00059 25.0 0.5 23 376-398 4-29 (34)
169 2k1p_A Zinc finger RAN-binding 26.2 34 0.0012 23.1 1.9 24 376-399 3-29 (33)
170 1z6u_A NP95-like ring finger p 26.0 21 0.00071 31.9 1.1 31 336-371 76-106 (150)
171 1kbe_A Kinase suppressor of RA 24.9 31 0.0011 25.4 1.7 29 448-480 15-45 (49)
172 3na7_A HP0958; flagellar bioge 24.6 23 0.0008 34.3 1.2 38 329-366 189-233 (256)
173 2lk0_A RNA-binding protein 5; 24.5 21 0.00072 24.0 0.6 22 377-398 3-27 (32)
174 2ea6_A Ring finger protein 4; 24.1 19 0.00065 26.8 0.4 37 335-371 12-50 (69)
175 2ecn_A Ring finger protein 141 22.7 27 0.00092 26.3 1.0 46 335-388 12-57 (70)
176 2d9g_A YY1-associated factor 2 22.6 38 0.0013 25.4 1.8 27 375-401 7-36 (53)
177 3cxl_A N-chimerin; SH2, RHO-GA 22.2 37 0.0013 35.7 2.3 35 337-371 219-253 (463)
178 2l0b_A E3 ubiquitin-protein li 22.0 37 0.0013 27.3 1.8 34 336-371 38-71 (91)
179 3dpl_R Ring-box protein 1; ubi 21.6 41 0.0014 28.4 2.1 35 337-371 36-83 (106)
180 2egp_A Tripartite motif-contai 21.3 36 0.0012 26.0 1.6 32 335-371 9-40 (79)
181 4a0k_B E3 ubiquitin-protein li 21.0 20 0.0007 31.0 0.0 31 449-479 50-95 (117)
182 3l11_A E3 ubiquitin-protein li 21.0 38 0.0013 28.2 1.7 31 336-371 13-43 (115)
183 2ecv_A Tripartite motif-contai 20.1 25 0.00084 27.1 0.3 32 335-371 16-47 (85)
184 3dpl_R Ring-box protein 1; ubi 20.1 20 0.00069 30.4 -0.2 32 448-479 38-84 (106)
No 1
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=99.63 E-value=2.2e-16 Score=133.32 Aligned_cols=72 Identities=42% Similarity=0.795 Sum_probs=59.6
Q ss_pred CCcccccccccccccCCC-CCceeecCCCCCCceeeccchhccCCeEEEEeecccc----CCCceEEEcCCCCCCCC
Q psy5645 439 SSIPQSRWALICILCRER-LGACIQCSVKTCKTAYHVTCAFKHGLEMRAIIEDENA----EDGVKLRSYCQKHSLTT 510 (525)
Q Consensus 439 ~~I~~~r~~l~C~iC~~~-~GacIqCs~~~C~~aFHvtCA~~aGl~m~~~~~~~~~----~d~~~~~~yC~kHs~~~ 510 (525)
-+||++||+++|++|+++ .||||||+..+|.++||++||+++|+.|++....... .+.+++.+||++|+|..
T Consensus 9 ~NIp~~R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~~aGl~~~~~~~~~~~~~~~~~~v~~~~yC~~HsPpg 85 (87)
T 2lq6_A 9 MNIPPARWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQKAGLYMKMEPVKELTGGGTTFSVRKTAYCDVHTPPG 85 (87)
T ss_dssp CCCCCCCCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHHHHTCCEEEEEEEECTTTSCEEEEEEEECCGGGSSSS
T ss_pred cCCChHHhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHHHCCCceEeecccccccCCccccceECeECcCCCCcC
Confidence 478999999999999987 5999999999999999999999999999865432211 12357889999999853
No 2
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.29 E-value=1e-12 Score=106.82 Aligned_cols=55 Identities=45% Similarity=1.179 Sum_probs=50.0
Q ss_pred cccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCC
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
...++..|.||.++++++.|.||+||+|+.+||+.|||++.+|+|.|+|+.|...
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~~ 66 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 66 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcCc
Confidence 3456789999999988888999999999999999999999999999999999864
No 3
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.22 E-value=2.4e-12 Score=108.79 Aligned_cols=56 Identities=45% Similarity=1.146 Sum_probs=51.2
Q ss_pred ccccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCC
Q psy5645 333 LEFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 333 ~e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
.+.+++..|.||.++++++.|.||+||+|+.+||+.||++..+|+|.|+|+.|...
T Consensus 20 ~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~ 75 (88)
T 2l43_A 20 SLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQS 75 (88)
T ss_dssp CCCCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CcCCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCc
Confidence 34577899999999987888999999999999999999999999999999999874
No 4
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.12 E-value=2.1e-11 Score=102.94 Aligned_cols=56 Identities=29% Similarity=0.643 Sum_probs=48.8
Q ss_pred ccccCcccccccCCCCCCCCCcEEEccCCCceecccccccc------ccCCCCccceeecCC
Q psy5645 333 LEFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGIT------TIPSGSWLCRTCVLG 388 (525)
Q Consensus 333 ~e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~------~iPeg~WlC~~C~~~ 388 (525)
+..+++..|.||...+.++.|.||+||+|+.+||+.||+.+ .+|+|.|+|+.|...
T Consensus 11 ~~~e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~ 72 (88)
T 1wev_A 11 FAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp CHHHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred ccCCCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccch
Confidence 34456789999999988778999999999999999999964 379999999999874
No 5
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.10 E-value=3.2e-11 Score=96.04 Aligned_cols=54 Identities=39% Similarity=0.829 Sum_probs=47.4
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccc----c-CCCCccceeecCCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITT----I-PSGSWLCRTCVLGK 389 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~----i-Peg~WlC~~C~~~~ 389 (525)
.++..|.||..+++++.|.||+||+|+.+||+.||++.. + |+|.|+|+.|....
T Consensus 4 ~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 4 GSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 356799999998888889999999999999999999743 4 89999999998754
No 6
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.81 E-value=1.7e-09 Score=81.89 Aligned_cols=47 Identities=34% Similarity=0.951 Sum_probs=41.0
Q ss_pred cccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCC
Q psy5645 340 ICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 340 ~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~ 388 (525)
.|.||+.++ +.+.||.||+|+.+||+.|++ +..+|+|.|+|..|..+
T Consensus 2 ~C~vC~~~~--~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~~ 50 (51)
T 1f62_A 2 RCKVCRKKG--EDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQPA 50 (51)
T ss_dssp CCTTTCCSS--CCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSCC
T ss_pred CCCCCCCCC--CCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCcccc
Confidence 699999874 456999999999999999995 66799999999999763
No 7
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.80 E-value=7.2e-09 Score=90.43 Aligned_cols=49 Identities=29% Similarity=0.769 Sum_probs=40.9
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccc--cCCCCccceeec
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITT--IPSGSWLCRTCV 386 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~--iPeg~WlC~~C~ 386 (525)
.+++.|.||.++. +.++||.|++|+..||..|+++.. ++.+.|+|..|.
T Consensus 5 ~~~~~C~~C~~~g--~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPG--DLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCC--CTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCC--CCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 4567999999873 345789999999999999999764 457899999886
No 8
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=98.79 E-value=5.9e-09 Score=91.05 Aligned_cols=72 Identities=26% Similarity=0.517 Sum_probs=59.0
Q ss_pred ccCcccccccCCCCCCCCCcEEEcc--CCCceeccccccccccCCCCccceeecCC-----CCCccccCCC------CCC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCD--CCNICVHQACYGITTIPSGSWLCRTCVLG-----KRPECILCPN------KGG 401 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD--~C~i~VHq~CYgi~~iPeg~WlC~~C~~~-----~~~~C~LCp~------~gG 401 (525)
.++++.|.||.++ ++||.|| +|..+||..|+++..+|+|.|+|..|.-. ....|.+||. ..|
T Consensus 12 ~~~~~~C~~C~~~-----G~ll~CD~~~Cp~~fH~~Cl~L~~~P~g~W~Cp~c~C~~C~k~~~~~C~~Cp~sfC~~c~~g 86 (107)
T 4gne_A 12 QMHEDYCFQCGDG-----GELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFCEFCPHSFCKDHEKG 86 (107)
T ss_dssp CSSCSSCTTTCCC-----SEEEECCSTTCCCEECTGGGTCSSCCSSCCCCGGGBCTTTCSBCCEECSSSSCEECTTTCTT
T ss_pred CCCCCCCCcCCCC-----CcEeEECCCCCCcccccccCcCCcCCCCCEECCCCCCCcCCCCCCcCcCCCCcchhhhccCC
Confidence 4567899999954 6899999 89999999999999999999999987643 3578999995 468
Q ss_pred CCccccCCCcc
Q psy5645 402 AMKCARSGNKW 412 (525)
Q Consensus 402 alK~t~~g~~W 412 (525)
+|+.+..+ .|
T Consensus 87 ~l~~~~~~-~~ 96 (107)
T 4gne_A 87 ALVPSALE-GR 96 (107)
T ss_dssp SCEECTTT-TC
T ss_pred cceecCCC-Cc
Confidence 88777544 45
No 9
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.76 E-value=5.4e-09 Score=92.03 Aligned_cols=48 Identities=27% Similarity=0.672 Sum_probs=40.6
Q ss_pred ccccccCCCCC-----CCCCcEEEccCCCceecccccccc-----ccCCCCccceeec
Q psy5645 339 VICDVCRSPDS-----EEGNEMVFCDCCNICVHQACYGIT-----TIPSGSWLCRTCV 386 (525)
Q Consensus 339 ~~C~VC~~~e~-----ed~N~lv~CD~C~i~VHq~CYgi~-----~iPeg~WlC~~C~ 386 (525)
..|.+|.+++. .+.++||+|++|+..||..|.++. .++++.|.|..|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 57999998753 234699999999999999999975 4788999999985
No 10
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=98.74 E-value=4e-09 Score=84.25 Aligned_cols=48 Identities=38% Similarity=0.962 Sum_probs=43.0
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~ 388 (525)
+++..|.||.++ +.||.||+|..+||+.|++ +..+|+|.|+|..|...
T Consensus 6 ~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 6 KNEDECAVCRDG-----GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp SCCCSBSSSSCC-----SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CCCCCCccCCCC-----CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 466899999975 5899999999999999999 66789999999999875
No 11
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=98.74 E-value=4.4e-09 Score=82.78 Aligned_cols=48 Identities=33% Similarity=0.909 Sum_probs=42.2
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~ 388 (525)
.++..|.||.++ +.||.||+|..+||+.|++ +..+|+|.|+|..|...
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDG-----GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCC-----SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCCcCCCCCCC-----CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 346789999864 6899999999999999999 56799999999999875
No 12
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=98.73 E-value=5e-09 Score=82.49 Aligned_cols=51 Identities=31% Similarity=0.814 Sum_probs=44.3
Q ss_pred ccccCcccccccCCCCCCCCCcEEEccCCCceeccccccc--cccCCCCccceeecCC
Q psy5645 333 LEFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI--TTIPSGSWLCRTCVLG 388 (525)
Q Consensus 333 ~e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi--~~iPeg~WlC~~C~~~ 388 (525)
.+.+++..|.||.++ +.||.||+|..+||+.|++. ..+|+|.|+|..|...
T Consensus 6 ~~~~~~~~C~vC~~~-----g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~ 58 (61)
T 2l5u_A 6 YETDHQDYCEVCQQG-----GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKE 58 (61)
T ss_dssp CSSCCCSSCTTTSCC-----SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGG
T ss_pred ccCCCCCCCccCCCC-----CcEEECCCCChhhhhhccCCCCCCCCCCceECcccccc
Confidence 345667899999974 69999999999999999997 5689999999999763
No 13
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.71 E-value=7e-09 Score=80.14 Aligned_cols=47 Identities=34% Similarity=0.963 Sum_probs=41.6
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVL 387 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~ 387 (525)
.++..|.||... +.||.||+|..+||+.|++ +..+|+|.|+|..|..
T Consensus 7 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 7 GHEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SSCCSCSSSCCS-----SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCCccCCCC-----CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 456789999975 6899999999999999999 6679999999999964
No 14
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.69 E-value=1.1e-08 Score=89.75 Aligned_cols=50 Identities=22% Similarity=0.626 Sum_probs=41.4
Q ss_pred CcccccccCCCCC----CCCCcEEEccCCCceecccccccc-----ccCCCCccceeec
Q psy5645 337 ENVICDVCRSPDS----EEGNEMVFCDCCNICVHQACYGIT-----TIPSGSWLCRTCV 386 (525)
Q Consensus 337 ed~~C~VC~~~e~----ed~N~lv~CD~C~i~VHq~CYgi~-----~iPeg~WlC~~C~ 386 (525)
...+|.+|.+.+. .++++||.|++|+..||..|+++. .++.+.|+|..|+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 3468999998753 234699999999999999999863 4689999999997
No 15
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=98.68 E-value=9.7e-09 Score=82.22 Aligned_cols=48 Identities=25% Similarity=0.536 Sum_probs=41.4
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCCC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLGK 389 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~~ 389 (525)
.+..|.||.++ ++||.||+|+.+||+.|+. +..+|+|.|+|..|....
T Consensus 11 ~~~~C~vC~~~-----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 11 PGARCGVCGDG-----TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp TTCCCTTTSCC-----TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCcCCCCCC-----CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 45689999864 5799999999999999996 557999999999998753
No 16
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.67 E-value=6.1e-09 Score=88.57 Aligned_cols=54 Identities=37% Similarity=0.924 Sum_probs=46.2
Q ss_pred ccccCcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCC
Q psy5645 333 LEFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 333 ~e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~ 388 (525)
....++..|.||.... +.+.||.||+|..+||+.|++ +..+|+|.|+|..|...
T Consensus 11 ~~~~~~~~C~vC~~~~--~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 11 AQFIDSYICQVCSRGD--EDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCSSSCCSG--GGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hhccCCCCCccCCCcC--CCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 3456678999999874 346999999999999999999 56799999999999874
No 17
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=98.67 E-value=7.8e-09 Score=80.91 Aligned_cols=47 Identities=34% Similarity=0.955 Sum_probs=41.6
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~ 388 (525)
++..|.||..+ +.||.||+|..+||+.|++ +..+|+|.|+|..|...
T Consensus 4 ~~~~C~vC~~~-----g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 4 HEDFCSVCRKS-----GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCSSCTTTCCC-----SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCcCCCCC-----CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 35789999975 6899999999999999999 66789999999999763
No 18
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=98.61 E-value=2.3e-08 Score=84.32 Aligned_cols=49 Identities=33% Similarity=0.971 Sum_probs=43.1
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccc--cccccCCCCccceeecCC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACY--GITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CY--gi~~iPeg~WlC~~C~~~ 388 (525)
.+++..|.||..+ +.||.||+|..+||..|+ ++..+|+|.|+|..|...
T Consensus 22 d~n~~~C~vC~~~-----g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 22 DDSATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSSCCSSSCSS-----SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCCcCcCcCCC-----CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 4567899999976 579999999999999999 567899999999999864
No 19
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=7.7e-08 Score=79.25 Aligned_cols=46 Identities=33% Similarity=0.875 Sum_probs=40.8
Q ss_pred cccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCC-CccceeecC
Q psy5645 340 ICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSG-SWLCRTCVL 387 (525)
Q Consensus 340 ~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg-~WlC~~C~~ 387 (525)
.|.||...+ +++.||+||+|+.+||+.|++ +..+|+| .|+|..|..
T Consensus 28 ~C~vC~~~~--~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKH--EPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCC--CSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcC--CCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 899999763 567999999999999999999 6679999 999999964
No 20
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=98.48 E-value=4.1e-08 Score=77.03 Aligned_cols=50 Identities=38% Similarity=0.872 Sum_probs=40.3
Q ss_pred cccCcccccccCCCCCCCCCcEEEccC--CC-ceeccccccccccCCCCccceeecC
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDC--CN-ICVHQACYGITTIPSGSWLCRTCVL 387 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~--C~-i~VHq~CYgi~~iPeg~WlC~~C~~ 387 (525)
+.++...| +|++.+ ++.||.||+ |. ..||..|+|+..+|.|.|+|..|..
T Consensus 6 d~~e~~~C-~C~~~~---~g~mi~CD~cdC~~~wfH~~Cvgl~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 6 DPNEPTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp ---CCEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCCCCEE-ECCCcC---CCCEEEeCCCCCCCceEehhcCCCCcCCCCCEECcCccC
Confidence 34455677 999874 368999999 55 6899999999999999999999975
No 21
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=98.45 E-value=8.7e-08 Score=77.48 Aligned_cols=46 Identities=26% Similarity=0.900 Sum_probs=40.1
Q ss_pred cccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCC-CccceeecC
Q psy5645 340 ICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSG-SWLCRTCVL 387 (525)
Q Consensus 340 ~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg-~WlC~~C~~ 387 (525)
.|.||+.. ++++.||.||+|..+||+.|++ +..+|+| .|+|..|..
T Consensus 20 ~C~~C~~~--~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGR--QDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCC--SCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCc--CCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 67788875 3557999999999999999999 6779999 999999975
No 22
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=98.43 E-value=1.7e-07 Score=76.06 Aligned_cols=54 Identities=35% Similarity=0.805 Sum_probs=44.6
Q ss_pred cccccCcccccccCCCCCCCCCcEEEccC--CC-ceeccccccccccCCCCccceeecCCC
Q psy5645 332 GLEFDENVICDVCRSPDSEEGNEMVFCDC--CN-ICVHQACYGITTIPSGSWLCRTCVLGK 389 (525)
Q Consensus 332 ~~e~ded~~C~VC~~~e~ed~N~lv~CD~--C~-i~VHq~CYgi~~iPeg~WlC~~C~~~~ 389 (525)
.++.++...| +|++.+ ++.||.||+ |. ..||..|+|+..+|.|.|+|..|....
T Consensus 10 ~~d~~~~~~C-~C~~~~---~g~MI~CD~~~C~~~wfH~~Cvgl~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 10 PVDPNEPTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCCTTSCCCS-TTCCCS---CSSEECCSCSSCSCCCEETTTTTCSSCCSSCCCCTTTSSCS
T ss_pred ccCCCCCCEE-ECCCCC---CCCEeEeeCCCCCCccEecccCCcCcCCCCCEECCCCCccc
Confidence 3445566778 899874 258999999 77 599999999999999999999998753
No 23
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=98.38 E-value=1.1e-07 Score=74.35 Aligned_cols=50 Identities=38% Similarity=0.832 Sum_probs=40.7
Q ss_pred cccCcccccccCCCCCCCCCcEEEccC--CC-ceeccccccccccCCCCccceeecC
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDC--CN-ICVHQACYGITTIPSGSWLCRTCVL 387 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~--C~-i~VHq~CYgi~~iPeg~WlC~~C~~ 387 (525)
+.++...| +|++.+ ++.||.||+ |. ..||..|.|+..+|.|.|+|..|..
T Consensus 5 d~~e~~yC-~C~~~~---~g~mi~CD~~~C~~~wfH~~Cvgl~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 5 GSNEPTYC-LCHQVS---YGEMIGCDNPDCPIEWFHFACVDLTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp ---CCEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHC
T ss_pred CCCCCcEE-ECCCCC---CCCeeEeeCCCCCCCCEecccCCcccCCCCCEECcCccC
Confidence 34556677 999874 358999999 76 5999999999999999999999975
No 24
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=98.35 E-value=2.3e-07 Score=76.45 Aligned_cols=46 Identities=26% Similarity=0.897 Sum_probs=38.7
Q ss_pred cccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCC-ccceeecC
Q psy5645 340 ICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGS-WLCRTCVL 387 (525)
Q Consensus 340 ~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~-WlC~~C~~ 387 (525)
.|.||...+ +.+.||+||+|..+||+.|++ +..+|+|. |+|..|+.
T Consensus 28 ~C~vC~~~~--d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCS--CGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCC--CCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 577777653 556999999999999999999 56799999 99999975
No 25
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=98.34 E-value=1.7e-07 Score=74.13 Aligned_cols=51 Identities=29% Similarity=0.647 Sum_probs=41.1
Q ss_pred cccCcccccccCCCCCCCCCcEEEccCCC---ceeccccccccccCCCCccceeecCC
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDCCN---ICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~C~---i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
+.++...| +|++.+ ++.||.||+|+ .-||..|.|+..+|.|.|+|..|...
T Consensus 7 d~~e~~yC-~C~~~~---~g~MI~CD~c~C~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 7 DPNEPTYC-LCNQVS---YGEMIGCDNEQCPIEWFHFSCVSLTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp ---CCEET-TTTEEC---CSEEEECSCTTCSSCEEETGGGTCSSCCSSCCCCHHHHTC
T ss_pred CCCCCcEE-ECCCCC---CCCeeeeeCCCCCcccEecccCCcCcCCCCCEECcCcccC
Confidence 34555677 999873 25899999955 89999999999999999999999764
No 26
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=98.33 E-value=2.1e-07 Score=78.85 Aligned_cols=50 Identities=34% Similarity=0.767 Sum_probs=41.4
Q ss_pred cccCcccccccCCCCCCCCCcEEEccCCC---ceeccccccccccCCCCcccee-ecC
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDCCN---ICVHQACYGITTIPSGSWLCRT-CVL 387 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~C~---i~VHq~CYgi~~iPeg~WlC~~-C~~ 387 (525)
+.++...| +|+..+. +.||.||+|+ ..||..|+|+..+|.|.|+|.. |..
T Consensus 22 ~~~~~~yC-iC~~~~~---g~MI~CD~c~C~~eWfH~~CVgl~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 22 NNQEEVYC-FCRNVSY---GPMVACDNPACPFEWFHYGCVGLKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp --CCSCCS-TTTCCCS---SSEECCCSSSCSCSCEETTTSSCSSCTTSCCCSSHHHHH
T ss_pred CCCCCcEE-EeCCCCC---CCEEEecCCCCccccCcCccCCCCcCCCCCccCChhhcc
Confidence 44566778 9998642 4799999977 7999999999999999999999 875
No 27
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=98.27 E-value=3.8e-07 Score=86.13 Aligned_cols=48 Identities=31% Similarity=0.791 Sum_probs=41.9
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCCC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLGK 389 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~~ 389 (525)
++..|.||.++ ++|+.||+|..+||..|++ +..+|+|.|+|..|+...
T Consensus 3 ~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG-----GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC-----SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC-----CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 45789999965 5799999999999999995 557899999999999864
No 28
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=98.26 E-value=3.9e-07 Score=87.69 Aligned_cols=49 Identities=27% Similarity=0.758 Sum_probs=42.4
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCCCC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLGKR 390 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~~~ 390 (525)
++..|.||.++ +.|+.||+|..+||..|++ +..+|+|.|+|..|.....
T Consensus 6 ~~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~ 56 (207)
T 3u5n_A 6 NEDWCAVCQNG-----GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGK 56 (207)
T ss_dssp SCSSBTTTCCC-----EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCCCCCCCC-----CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCccc
Confidence 45789999975 5799999999999999995 5578999999999998643
No 29
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.26 E-value=3.9e-07 Score=80.10 Aligned_cols=49 Identities=31% Similarity=0.829 Sum_probs=42.1
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVL 387 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~ 387 (525)
+-..|.||...+ +++.||+||+|..+||+.|++ +..+|+|.|+|..|..
T Consensus 57 ~C~~C~~C~~~~--~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 107 (114)
T 2kwj_A 57 ECKSCILCGTSE--NDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWE 107 (114)
T ss_dssp GGCCCTTTTCCT--TTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHH
T ss_pred ccCccCcccccC--CCCceEEcCCCCccccccccCCCccCCCCCCeECccccc
Confidence 335799998863 457999999999999999999 6679999999999975
No 30
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.23 E-value=6.1e-07 Score=76.16 Aligned_cols=53 Identities=36% Similarity=0.830 Sum_probs=43.6
Q ss_pred ccccCcccccccCCCCCCCCCcEEEccC--CC-ceeccccccccccCCCCccceeecCCC
Q psy5645 333 LEFDENVICDVCRSPDSEEGNEMVFCDC--CN-ICVHQACYGITTIPSGSWLCRTCVLGK 389 (525)
Q Consensus 333 ~e~ded~~C~VC~~~e~ed~N~lv~CD~--C~-i~VHq~CYgi~~iPeg~WlC~~C~~~~ 389 (525)
++.++..+| +|++.+ ++.||.||+ |. .-||..|.|+..+|.|.|+|..|....
T Consensus 31 ~d~~e~~yC-iC~~~~---~g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 31 VDPNEPTYC-LCHQVS---YGEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCSCCCBCS-TTCCBC---CSCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCC
T ss_pred cCCCCCcEE-ECCCCC---CCCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcC
Confidence 344556778 999874 258999999 66 589999999999999999999998753
No 31
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=98.21 E-value=4.5e-07 Score=73.72 Aligned_cols=51 Identities=33% Similarity=0.782 Sum_probs=42.4
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccc--cCCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITT--IPSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~--iPeg~WlC~~C~~~ 388 (525)
++...|.||+..+ ++..||.||+|...||..|+|+.. ++++.|+|..|...
T Consensus 16 ~~~~~C~~C~~~~--~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~ 68 (75)
T 2k16_A 16 NQIWICPGCNKPD--DGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANK 68 (75)
T ss_dssp CEEECBTTTTBCC--SSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHH
T ss_pred CCCcCCCCCCCCC--CCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCc
Confidence 3456899999874 455899999999999999999865 45689999999764
No 32
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.16 E-value=9.7e-07 Score=77.28 Aligned_cols=54 Identities=31% Similarity=0.871 Sum_probs=43.9
Q ss_pred ccccCcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecC
Q psy5645 333 LEFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVL 387 (525)
Q Consensus 333 ~e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~ 387 (525)
+.-.+-..|.||+... ++.+.||+||+|..+||..|+. +..+|+|.|+|..|+.
T Consensus 56 W~C~~C~~C~vC~~~~-~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 56 WQCIECKTCSSCRDQG-KNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CCCTTTCCBTTTCCCC-CTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred cccccCCccccccCcC-CCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 4444556899999753 3446899999999999999995 5679999999999964
No 33
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=98.14 E-value=6.7e-07 Score=85.21 Aligned_cols=47 Identities=32% Similarity=0.970 Sum_probs=41.3
Q ss_pred cccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecCCC
Q psy5645 338 NVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVLGK 389 (525)
Q Consensus 338 d~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~~~ 389 (525)
++.|.||+++ +.|+.||+|..+||..|+. +..+|+|.|+|..|....
T Consensus 2 ~~~C~~C~~~-----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKP-----GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCC-----SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCC-----CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4689999975 5799999999999999994 667999999999999764
No 34
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=98.12 E-value=1.6e-06 Score=75.47 Aligned_cols=51 Identities=27% Similarity=0.871 Sum_probs=42.3
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCCCccceeecC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSGSWLCRTCVL 387 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg~WlC~~C~~ 387 (525)
..+-..|.||.... +.+.|++||.|+.+||..|++ +..+|+|.|+|..|..
T Consensus 51 C~~C~~C~~C~~~~--~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 51 CPECKVCQNCKQSG--EDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CTTTCCCTTTCCCS--CCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred CCcCCcccccCccC--CCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 33445799998864 346899999999999999999 5578999999999976
No 35
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=98.08 E-value=1.6e-06 Score=84.70 Aligned_cols=47 Identities=26% Similarity=0.875 Sum_probs=37.2
Q ss_pred ccccccCCCCCCCCCcEEEccCCCceecccccc--ccccCCC-CccceeecC
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDCCNICVHQACYG--ITTIPSG-SWLCRTCVL 387 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg--i~~iPeg-~WlC~~C~~ 387 (525)
..|.+|...+ +++.||+||+|+.+||+.|++ +..+|+| .|+|..|..
T Consensus 175 c~C~vC~~~~--~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQ--DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCC--C--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCC--CCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 3799998763 457999999999999999999 5678999 999999975
No 36
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=98.06 E-value=2.9e-06 Score=72.72 Aligned_cols=48 Identities=31% Similarity=0.830 Sum_probs=38.2
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceeccccccccc--cCCCCccceeecCC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITT--IPSGSWLCRTCVLG 388 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~--iPeg~WlC~~C~~~ 388 (525)
+...| ||...+ +++.||.||+|+..||..|+|+.. +| +.|+|..|...
T Consensus 27 d~vrC-iC~~~~--~~~~mi~Cd~C~~w~H~~C~~~~~~~~p-~~w~C~~C~~~ 76 (98)
T 2lv9_A 27 DVTRC-ICGFTH--DDGYMICCDKCSVWQHIDCMGIDRQHIP-DTYLCERCQPR 76 (98)
T ss_dssp CBCCC-TTSCCS--CSSCEEEBTTTCBEEETTTTTCCTTSCC-SSBCCTTTSSS
T ss_pred CCEEe-ECCCcc--CCCcEEEcCCCCCcCcCcCCCCCccCCC-CCEECCCCcCC
Confidence 33556 898763 457999999999999999999853 55 47999999753
No 37
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=98.04 E-value=1.4e-06 Score=96.65 Aligned_cols=63 Identities=65% Similarity=1.000 Sum_probs=58.9
Q ss_pred CCccCCCCCCCCCCCCCCCceEecCCCCcChhhhhccCCCCceeeEEeCccccccccccCCCceecc
Q psy5645 37 LGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNIYLTWKTNHQYEI 103 (525)
Q Consensus 37 lg~~~~~~~~plhDp~~~~AlVl~~P~~~~~~~~~~~~~~~~~V~VVVDP~L~~~ld~w~~~~~~~~ 103 (525)
||+|++..++|||||++++|+||+.|+..+.|+++..+.....++|+|||.|...| ++||+++
T Consensus 1 ~~~~~~~~~~~l~dp~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~p~l~~~L----rpyQ~~g 63 (644)
T 1z3i_X 1 LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVL----RPHQREG 63 (644)
T ss_dssp CCSSCSSSCCCSSCTTSTTCCEEECCCCCCHHHHHHSCGGGSCCCEECCHHHHTTC----CHHHHHH
T ss_pred CCCCCCCCCCCCCCCCccCceecCCCCCCCHHHHhhhccccCCceEeeChhhhhcc----cHHHHHH
Confidence 79999999999999999999999999999999999887767779999999999999 9999887
No 38
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.95 E-value=2.6e-06 Score=68.81 Aligned_cols=49 Identities=33% Similarity=0.760 Sum_probs=40.8
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCC---ceeccccccccccCCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCN---ICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~---i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
++..+| +|+..+ .+.||.||+|+ .-||..|.|+...|.+.|+|..|...
T Consensus 4 ~~~~yC-~C~~~~---~g~MI~CD~cdC~~~WfH~~Cvgl~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 4 GSSGYC-ICNQVS---YGEMVGCDNQDCPIEWFHYGCVGLTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp SCCCCS-TTSCCC---CSSEECCSCTTCSCCCEEHHHHTCSSCCSSCCCCHHHHHH
T ss_pred CCCeEE-EcCCCC---CCCEeEeCCCCCCccCCcccccccCcCCCCCEECCCCCcc
Confidence 344566 699873 34999999986 79999999999999999999999864
No 39
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=97.65 E-value=3.5e-05 Score=61.80 Aligned_cols=50 Identities=26% Similarity=0.642 Sum_probs=39.9
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccccccc-CCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTI-PSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~i-Peg~WlC~~C~~~ 388 (525)
.+...| +|+..+ ++..||.||.|..=+|..|.|+... ..+.|+|..|..+
T Consensus 17 ~~~~~C-iC~~~~--~~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~s 67 (68)
T 3o70_A 17 QGLVTC-FCMKPF--AGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRDS 67 (68)
T ss_dssp TTCCCS-TTCCCC--TTCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHTC
T ss_pred CCceEe-ECCCcC--CCCCEEECCCCCccccccccCcCcccCCCcEECCCCCCC
Confidence 344667 999864 3568999999999999999998752 2368999999764
No 40
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.57 E-value=4.6e-05 Score=59.89 Aligned_cols=52 Identities=21% Similarity=0.519 Sum_probs=42.3
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccccC---CCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIP---SGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iP---eg~WlC~~C~~~ 388 (525)
++...|.+|..... ++..||.||.|..=||..|.|+...+ .+.|+|..|...
T Consensus 4 ~e~~~C~~C~~~~~-~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 4 GSSGQCGACGESYA-ADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SSCCCCSSSCCCCC-SSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCccC-CCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 45678999998742 34689999999999999999987542 368999999764
No 41
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=97.47 E-value=6.6e-05 Score=59.98 Aligned_cols=50 Identities=28% Similarity=0.671 Sum_probs=38.1
Q ss_pred ccCcccccccCCCCCCCCCcEEEccC--CCceeccccccccccCC------CCccceeecC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDC--CNICVHQACYGITTIPS------GSWLCRTCVL 387 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~--C~i~VHq~CYgi~~iPe------g~WlC~~C~~ 387 (525)
.++...| ||+..+ +++.||.||+ |+.=+|..|+|+...+. ..|+|..|+.
T Consensus 7 ~e~~v~C-~C~~~~--~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 7 PEAKVRC-ICSSTM--VNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp SSCEECC-TTCCCS--CCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CCCCEEe-ECCCCc--CCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 3444566 898753 4468999995 99999999999865432 3699999975
No 42
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.43 E-value=8.2e-05 Score=60.99 Aligned_cols=51 Identities=29% Similarity=0.706 Sum_probs=41.4
Q ss_pred cCcccccccCCCCCCCCCcEEEcc--CCCceeccccccccccC-------CCCccceeecCCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCD--CCNICVHQACYGITTIP-------SGSWLCRTCVLGK 389 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD--~C~i~VHq~CYgi~~iP-------eg~WlC~~C~~~~ 389 (525)
++...| +|+..+ +++.||.|| .|..=+|..|+|+...+ .+.|+|..|....
T Consensus 14 ~~~~~C-iC~~~~--~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 14 EIKVRC-VCGNSL--ETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCCC-SSCCCC--CCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCCEEe-ECCCcC--CCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 345677 899983 446999999 99999999999997654 2589999998753
No 43
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=97.43 E-value=8.2e-05 Score=60.00 Aligned_cols=52 Identities=31% Similarity=0.746 Sum_probs=40.1
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccccccc--CCCCccceeecCCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTI--PSGSWLCRTCVLGK 389 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~i--Peg~WlC~~C~~~~ 389 (525)
++...| +|+..+ +++..||.||.|..=+|..|.|+... ..+.|+|..|....
T Consensus 14 ~~~~~C-~C~~~~-~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 14 NWKVDC-KCGTKD-DDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SSEECC-TTCCCS-CCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred CcceEe-eCCCcc-CCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 344678 799863 23347999999999999999998742 34789999998643
No 44
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=97.34 E-value=4.3e-05 Score=60.79 Aligned_cols=50 Identities=28% Similarity=0.803 Sum_probs=40.0
Q ss_pred cCcccccccCCCCCCCCCcEEEcc-CCCceeccccccccc--------cCCCCccceeec
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCD-CCNICVHQACYGITT--------IPSGSWLCRTCV 386 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD-~C~i~VHq~CYgi~~--------iPeg~WlC~~C~ 386 (525)
+....|.+|..+.. ++..||.|| +|..=||..|.|+.. -|.+.|+|..|.
T Consensus 6 ~~~~~C~~C~~p~~-~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 6 DPVYPCGICTNEVN-DDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp ---CBCTTTCSBCC-TTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CCcCcCccCCCccC-CCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 34568999999743 346899999 999999999999874 277899999996
No 45
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.25 E-value=0.0001 Score=59.94 Aligned_cols=54 Identities=28% Similarity=0.731 Sum_probs=41.7
Q ss_pred cccCcccccccCCCCCCCCCcEEEccCCCceecccccccccc-------CCCCccceeecCCC
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTI-------PSGSWLCRTCVLGK 389 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~i-------Peg~WlC~~C~~~~ 389 (525)
.+|++.+.++|+... ++..||.||.|..=||..|.|+... ..+.|+|..|....
T Consensus 11 ~~d~~~~~C~C~~~~--~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 11 VYDPNALYCICRQPH--NNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp SCCTTCCCSTTCCCC--CSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred ccCCCCCEEECCCcc--CCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 344444544999875 3458999999999999999998753 35789999998643
No 46
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=97.19 E-value=0.00021 Score=54.05 Aligned_cols=46 Identities=24% Similarity=0.608 Sum_probs=37.1
Q ss_pred cccccCCCCCCCCCcEEEccCCCceecccccccccc-CCCCccceeecC
Q psy5645 340 ICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTI-PSGSWLCRTCVL 387 (525)
Q Consensus 340 ~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~i-Peg~WlC~~C~~ 387 (525)
+-.+|+..+ +++.||.||+|+.=+|..|.|+... ..+.|+|..|..
T Consensus 5 ~~C~C~~~~--~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTCFCMKPF--AGRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp BCSTTCCBC--TTCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred eEEEeCCcC--CCCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 445798753 4679999999999999999998753 236899999975
No 47
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=97.17 E-value=6.4e-05 Score=69.95 Aligned_cols=51 Identities=27% Similarity=0.729 Sum_probs=41.3
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccccccc---CCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTI---PSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~i---Peg~WlC~~C~~~ 388 (525)
++...| +|+.+. ++++.||.||+|..-||..|.|+... ..+.|+|..|...
T Consensus 6 ~~~~~C-~C~~~~-~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~ 59 (174)
T 2ri7_A 6 DTKLYC-ICKTPE-DESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQST 59 (174)
T ss_dssp -CCEET-TTTEEC-CTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHH
T ss_pred CCCcEe-eCCCCC-CCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcch
Confidence 456788 999874 23468999999999999999998643 3679999999875
No 48
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=97.14 E-value=0.00017 Score=54.57 Aligned_cols=46 Identities=26% Similarity=0.704 Sum_probs=37.0
Q ss_pred cccccCCCCCCCCCcEEEcc-CCCceeccccccccccC--CCCccceeec
Q psy5645 340 ICDVCRSPDSEEGNEMVFCD-CCNICVHQACYGITTIP--SGSWLCRTCV 386 (525)
Q Consensus 340 ~C~VC~~~e~ed~N~lv~CD-~C~i~VHq~CYgi~~iP--eg~WlC~~C~ 386 (525)
.|.+|+.+. .++..||.|| +|..=||..|.|+...+ .+.|+|..|+
T Consensus 4 ~cc~C~~p~-~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPC-KDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCC-CTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCcc-CCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 578898875 3446899999 89999999999997532 4789999984
No 49
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=97.10 E-value=0.00014 Score=66.38 Aligned_cols=46 Identities=22% Similarity=0.598 Sum_probs=39.4
Q ss_pred cccccccCCCCCCCCCcEEEccCCCceecccccccc-------c--cCCCCccceeecCC
Q psy5645 338 NVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGIT-------T--IPSGSWLCRTCVLG 388 (525)
Q Consensus 338 d~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~-------~--iPeg~WlC~~C~~~ 388 (525)
+..|.||.++ ++|+.||.|..+||..|...+ . .|+|.|.|..|...
T Consensus 63 ~d~C~vC~~G-----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 63 DEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp BCSCSSSCCC-----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCeecccCCC-----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 4789999986 799999999999999999843 2 38999999999753
No 50
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=97.05 E-value=0.00026 Score=58.04 Aligned_cols=52 Identities=23% Similarity=0.455 Sum_probs=40.0
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccccC---CCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIP---SGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iP---eg~WlC~~C~~~ 388 (525)
+...+.++|.... +++..||.||.|..=||..|.|+...+ .+.|+|..|...
T Consensus 9 ~~~~~~C~C~~~~-d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 63 (79)
T 1wep_A 9 ALVPVYCLCRQPY-NVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAV 63 (79)
T ss_dssp CCCCCCSTTSCSC-CSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTT
T ss_pred cCCccEEEcCCcc-CCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccc
Confidence 3333444999874 235699999999999999999987532 368999999875
No 51
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=96.92 E-value=0.00029 Score=61.05 Aligned_cols=50 Identities=30% Similarity=0.814 Sum_probs=41.6
Q ss_pred ccccccCCCCCCCCCcEEEcc-CCCceeccccccccc--------cCCCCccceeecCCC
Q psy5645 339 VICDVCRSPDSEEGNEMVFCD-CCNICVHQACYGITT--------IPSGSWLCRTCVLGK 389 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD-~C~i~VHq~CYgi~~--------iPeg~WlC~~C~~~~ 389 (525)
..|.+|+.+.. +++.|+.|| +|..=||..|.|+.. .|++.|+|..|....
T Consensus 4 ~~C~iC~~p~~-~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 4 YPCGACRSEVN-DDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CBCTTTCSBCC-TTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred CCCCCCCCccC-CCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 47999999843 335799998 999999999999874 367899999998753
No 52
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=96.82 E-value=0.0003 Score=63.26 Aligned_cols=46 Identities=24% Similarity=0.655 Sum_probs=39.1
Q ss_pred cccccccCCCCCCCCCcEEEccCCCceecccccccc-------cc--CCCCccceeecCC
Q psy5645 338 NVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGIT-------TI--PSGSWLCRTCVLG 388 (525)
Q Consensus 338 d~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~-------~i--Peg~WlC~~C~~~ 388 (525)
+..|.||.++ ++++.||.|..+||..|.... .+ |++.|.|-.|...
T Consensus 57 ~~~C~vC~dG-----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 57 DEQCRWCAEG-----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp BSSCTTTCCC-----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCcCeecCCC-----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 4679999975 799999999999999999843 44 8899999999653
No 53
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=96.63 E-value=0.00054 Score=55.60 Aligned_cols=49 Identities=27% Similarity=0.583 Sum_probs=38.7
Q ss_pred ccccccCCCCCCCCCcEEEccCCCceeccccccccccCC---CCccceeecCC
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPS---GSWLCRTCVLG 388 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPe---g~WlC~~C~~~ 388 (525)
.+..+|+... +++..||.||.|..=||..|.|+...+. +.|+|..|...
T Consensus 10 ~~yCiC~~~~-~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 10 PVYCVCRLPY-DVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp CEETTTTEEC-CTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred eeEEECCCcC-CCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 4556998763 2346999999999999999999976432 57999999763
No 54
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=95.40 E-value=0.0054 Score=58.12 Aligned_cols=50 Identities=22% Similarity=0.654 Sum_probs=38.8
Q ss_pred ccccccCCCCCCC--CCcEEEccCCCceeccccccccc--------cCC-CCccceeecCC
Q psy5645 339 VICDVCRSPDSEE--GNEMVFCDCCNICVHQACYGITT--------IPS-GSWLCRTCVLG 388 (525)
Q Consensus 339 ~~C~VC~~~e~ed--~N~lv~CD~C~i~VHq~CYgi~~--------iPe-g~WlC~~C~~~ 388 (525)
..|.||.....++ +..||.||.|..=||..|.|+.. +|+ ..|.|..|...
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 4799999875433 23699999999999999999863 233 47999999775
No 55
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=94.59 E-value=0.0073 Score=65.21 Aligned_cols=51 Identities=25% Similarity=0.580 Sum_probs=39.9
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceeccccccccccCC---CCccceeecCC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPS---GSWLCRTCVLG 388 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPe---g~WlC~~C~~~ 388 (525)
.....++|+... +.+..||.||.|..=+|..|.|+...+. +.|+|..|...
T Consensus 35 ~~~~yC~C~~~~-d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 35 PPPVYCVCRQPY-DVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCEETTTTEEC-CTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCeEEeCCCcC-CCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 334555999864 2357899999999999999999976542 57999999863
No 56
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=94.13 E-value=0.032 Score=45.43 Aligned_cols=32 Identities=28% Similarity=0.651 Sum_probs=27.5
Q ss_pred cccccccccCCC--CCceeecCCCCCCceeeccch
Q psy5645 445 RWALICILCRER--LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 445 r~~l~C~iC~~~--~GacIqCs~~~C~~aFHvtCA 477 (525)
.+..+| +|++. .|.+|||....|..+||..|.
T Consensus 14 ~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CV 47 (78)
T 1wew_A 14 EIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCV 47 (78)
T ss_dssp CCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHH
T ss_pred CCCEEe-ECCCcCCCCCEEEECCccCCccccCEEE
Confidence 345678 79985 689999998899999999997
No 57
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=93.89 E-value=0.0075 Score=64.42 Aligned_cols=49 Identities=24% Similarity=0.544 Sum_probs=39.6
Q ss_pred ccccccCCCCCCCCCcEEEccCCCceeccccccccccC---CCCccceeecCC
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIP---SGSWLCRTCVLG 388 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iP---eg~WlC~~C~~~ 388 (525)
...++|+... ++++.||.||.|..=+|..|.|+...+ .+.|+|..|...
T Consensus 5 ~~yCiC~~~~-d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~ 56 (447)
T 3kv4_A 5 PVYCLCRLPY-DVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVL 56 (447)
T ss_dssp CEETTTTEEC-CTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHH
T ss_pred CeEEeCCCcC-CCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccc
Confidence 4677999864 335799999999999999999997543 267999999873
No 58
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=93.38 E-value=0.033 Score=60.41 Aligned_cols=35 Identities=26% Similarity=0.659 Sum_probs=30.3
Q ss_pred CcEEEccCCCceeccccccccccC---CCCccceeecC
Q psy5645 353 NEMVFCDCCNICVHQACYGITTIP---SGSWLCRTCVL 387 (525)
Q Consensus 353 N~lv~CD~C~i~VHq~CYgi~~iP---eg~WlC~~C~~ 387 (525)
..||.||+|..=||..|.|+..-. -+.|+|..|..
T Consensus 56 ~~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~ 93 (528)
T 3pur_A 56 FQWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVP 93 (528)
T ss_dssp TSEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHH
T ss_pred CCEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcC
Confidence 489999999999999999997532 26799999986
No 59
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=92.99 E-value=0.054 Score=42.09 Aligned_cols=29 Identities=28% Similarity=0.537 Sum_probs=25.0
Q ss_pred cccccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 447 ALICILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 447 ~l~C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
...|.+|++. .+.+|||. .|..+||..|+
T Consensus 6 ~~~C~~C~~~~~~~~~mI~Cd--~C~~WfH~~Cv 37 (64)
T 1we9_A 6 SGQCGACGESYAADEFWICCD--LCEMWFHGKCV 37 (64)
T ss_dssp CCCCSSSCCCCCSSSCEEECS--SSCCEEETTTT
T ss_pred CCCCCCCCCccCCCCCEEEcc--CCCCCCCcccc
Confidence 3579999976 36799999 89999999997
No 60
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=92.98 E-value=0.05 Score=43.11 Aligned_cols=29 Identities=28% Similarity=0.766 Sum_probs=24.5
Q ss_pred ccccccCCC--CCceeecCCCCCCceeeccch
Q psy5645 448 LICILCRER--LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 448 l~C~iC~~~--~GacIqCs~~~C~~aFHvtCA 477 (525)
.+| +|+.. .|.+|+|....|..+||..|.
T Consensus 11 v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cv 41 (68)
T 2rsd_A 11 VRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCV 41 (68)
T ss_dssp ECC-TTCCCSCCSCEEECSCTTTCEEEETTTS
T ss_pred EEe-ECCCCcCCCCEEEECCCCCCCeEchhhC
Confidence 467 79765 589999997679999999996
No 61
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=92.76 E-value=0.055 Score=42.33 Aligned_cols=31 Identities=29% Similarity=0.792 Sum_probs=25.5
Q ss_pred cccccccCCC-CCceeecCCCCCC-ceeeccchh
Q psy5645 447 ALICILCRER-LGACIQCSVKTCK-TAYHVTCAF 478 (525)
Q Consensus 447 ~l~C~iC~~~-~GacIqCs~~~C~-~aFHvtCA~ 478 (525)
...| +|++. .|.+|+|...+|. .+||..|.-
T Consensus 11 ~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvg 43 (62)
T 2g6q_A 11 PTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS 43 (62)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred CcEE-ECCCCCCCCeeeeeCCCCCcccEecccCC
Confidence 3567 89974 5889999977788 999999974
No 62
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=92.39 E-value=0.068 Score=42.68 Aligned_cols=31 Identities=26% Similarity=0.700 Sum_probs=25.4
Q ss_pred cccccccccCCCC--C-ceeecCCCCCCceeeccchh
Q psy5645 445 RWALICILCRERL--G-ACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 445 r~~l~C~iC~~~~--G-acIqCs~~~C~~aFHvtCA~ 478 (525)
.+...| +|++.. | .+|||. .|..+||..|+-
T Consensus 14 ~~~~~C-~C~~~~~~g~~mI~Cd--~C~~W~H~~Cvg 47 (72)
T 1wee_A 14 NWKVDC-KCGTKDDDGERMLACD--GCGVWHHTRCIG 47 (72)
T ss_dssp SSEECC-TTCCCSCCSSCEEECS--SSCEEEETTTTT
T ss_pred CcceEe-eCCCccCCCCcEEECC--CCCCccCCeeec
Confidence 456789 699863 5 699999 799999999973
No 63
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=92.17 E-value=0.086 Score=42.84 Aligned_cols=29 Identities=31% Similarity=0.808 Sum_probs=24.3
Q ss_pred ccccccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 446 WALICILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 446 ~~l~C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
+...| +|++. .+.+|||. .|..+||..|+
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd--~C~~WfH~~Cv 42 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECG--LCQDWFHGSCV 42 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBT--TTCCEEEHHHH
T ss_pred CccEE-EcCCccCCCCceEEcC--CCCCcEEeeec
Confidence 44567 89875 47899999 69999999997
No 64
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=91.82 E-value=0.083 Score=40.86 Aligned_cols=31 Identities=29% Similarity=0.748 Sum_probs=25.4
Q ss_pred cccccccCCC-CCceeecCCCCCC-ceeeccchh
Q psy5645 447 ALICILCRER-LGACIQCSVKTCK-TAYHVTCAF 478 (525)
Q Consensus 447 ~l~C~iC~~~-~GacIqCs~~~C~-~aFHvtCA~ 478 (525)
...| +|++. .|.+|+|+..+|. .+||..|.-
T Consensus 9 ~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg 41 (59)
T 3c6w_A 9 PTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD 41 (59)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred CcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCC
Confidence 3567 89974 5889999977798 699999974
No 65
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=91.78 E-value=0.048 Score=45.41 Aligned_cols=48 Identities=23% Similarity=0.636 Sum_probs=38.0
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccccc--------------ccCCCCccceeecC
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGIT--------------TIPSGSWLCRTCVL 387 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~--------------~iPeg~WlC~~C~~ 387 (525)
.|..|.||..-+ .+.++-|.-|++.||..|+--. ..+++.|.|..|..
T Consensus 14 ~D~~C~VC~~~t---~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~Cen 75 (89)
T 1wil_A 14 NDEMCDVCEVWT---AESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDN 75 (89)
T ss_dssp CSCCCTTTCCCC---SSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCC
T ss_pred CCcccCcccccc---ccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccch
Confidence 567999999763 5789999999999999998531 13567798888865
No 66
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=91.58 E-value=0.09 Score=42.32 Aligned_cols=29 Identities=34% Similarity=0.781 Sum_probs=24.1
Q ss_pred ccccccccCCC--CCceeecCCCCCCceeeccch
Q psy5645 446 WALICILCRER--LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 446 ~~l~C~iC~~~--~GacIqCs~~~C~~aFHvtCA 477 (525)
+...| +|++. .+.+|||. .|..+||..|.
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd--~C~~WfH~~Cv 45 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCD--RCEEWFHGDCV 45 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECS--SSCCEEEHHHH
T ss_pred CCCEE-ECCCccCCCCEEEeC--CCCCcEeCeEE
Confidence 34678 89986 35799999 79999999997
No 67
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=90.83 E-value=0.12 Score=40.02 Aligned_cols=31 Identities=29% Similarity=0.748 Sum_probs=25.2
Q ss_pred cccccccCCC-CCceeecCCCCCC-ceeeccchh
Q psy5645 447 ALICILCRER-LGACIQCSVKTCK-TAYHVTCAF 478 (525)
Q Consensus 447 ~l~C~iC~~~-~GacIqCs~~~C~-~aFHvtCA~ 478 (525)
...| +|++. .|.+|+|...+|. .+||..|.-
T Consensus 10 ~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg 42 (60)
T 2vnf_A 10 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 42 (60)
T ss_dssp CEET-TTTEECCSEEEECSCTTCSSCEEETGGGT
T ss_pred CCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCC
Confidence 3467 89874 5889999977788 799999974
No 68
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=90.71 E-value=0.27 Score=42.62 Aligned_cols=84 Identities=24% Similarity=0.516 Sum_probs=52.4
Q ss_pred ccccCCCCCCCCcccc--CCCcccccccccCCCccEEccCcccccccCCCCccccccc---ccccccCCCCCceeecCCC
Q psy5645 392 ECILCPNKGGAMKCAR--SGNKWAHVSCALWIPEVSIGCVEKMEPITKISSIPQSRWA---LICILCRERLGACIQCSVK 466 (525)
Q Consensus 392 ~C~LCp~~gGalK~t~--~g~~WvHv~CAlwipev~f~~~~~~epI~~i~~I~~~r~~---l~C~iC~~~~GacIqCs~~ 466 (525)
.|..|. .+|.|..-+ .=.+|.|..|+- +..+|...|. -.|.+|++. +-+.|.
T Consensus 17 ~C~~C~-~~G~ll~CD~~~Cp~~fH~~Cl~------------------L~~~P~g~W~Cp~c~C~~C~k~--~~~~C~-- 73 (107)
T 4gne_A 17 YCFQCG-DGGELVMCDKKDCPKAYHLLCLN------------------LTQPPYGKWECPWHQCDECSSA--AVSFCE-- 73 (107)
T ss_dssp SCTTTC-CCSEEEECCSTTCCCEECTGGGT------------------CSSCCSSCCCCGGGBCTTTCSB--CCEECS--
T ss_pred CCCcCC-CCCcEeEECCCCCCcccccccCc------------------CCcCCCCCEECCCCCCCcCCCC--CCcCcC--
Confidence 466666 456665554 234799999974 2233444553 368899875 348898
Q ss_pred CCCceeeccchhccCCeEEEEeeccccCCCceEEEcCCCCCCC
Q psy5645 467 TCKTAYHVTCAFKHGLEMRAIIEDENAEDGVKLRSYCQKHSLT 509 (525)
Q Consensus 467 ~C~~aFHvtCA~~aGl~m~~~~~~~~~~d~~~~~~yC~kHs~~ 509 (525)
.|.++||..|. .|..+.. ..++ ...|..|-+.
T Consensus 74 ~Cp~sfC~~c~--~g~l~~~------~~~~---~~c~~~~~~~ 105 (107)
T 4gne_A 74 FCPHSFCKDHE--KGALVPS------ALEG---RLCCSEHDPM 105 (107)
T ss_dssp SSSCEECTTTC--TTSCEEC------TTTT---CEECTTSCTT
T ss_pred CCCcchhhhcc--CCcceec------CCCC---ceecCCCCCC
Confidence 79999999997 3333221 1233 2558888653
No 69
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=90.56 E-value=0.14 Score=40.69 Aligned_cols=29 Identities=31% Similarity=0.756 Sum_probs=23.5
Q ss_pred cccccccCCC--CCceeecCCCCCCceeeccchh
Q psy5645 447 ALICILCRER--LGACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 447 ~l~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~ 478 (525)
...| +|++. .+.+|||. .|..+||..|.-
T Consensus 19 ~~~C-iC~~~~~~~~MIqCd--~C~~WfH~~Cvg 49 (68)
T 3o70_A 19 LVTC-FCMKPFAGRPMIECN--ECHTWIHLSCAK 49 (68)
T ss_dssp CCCS-TTCCCCTTCCEEECT--TTCCEEETTTTT
T ss_pred ceEe-ECCCcCCCCCEEECC--CCCccccccccC
Confidence 3568 99975 34699999 699999999973
No 70
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=90.53 E-value=0.16 Score=42.85 Aligned_cols=32 Identities=28% Similarity=0.680 Sum_probs=26.2
Q ss_pred ccccccccCCC-CCceeecCCCCCC-ceeeccchh
Q psy5645 446 WALICILCRER-LGACIQCSVKTCK-TAYHVTCAF 478 (525)
Q Consensus 446 ~~l~C~iC~~~-~GacIqCs~~~C~-~aFHvtCA~ 478 (525)
....| +|++. .|.+|+|...+|. .+||..|.-
T Consensus 35 e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg 68 (91)
T 1weu_A 35 EPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 68 (91)
T ss_dssp CCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT
T ss_pred CCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC
Confidence 34678 99974 5889999977798 799999974
No 71
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=90.52 E-value=0.21 Score=40.00 Aligned_cols=31 Identities=29% Similarity=0.748 Sum_probs=25.7
Q ss_pred cccccccCCC-CCceeecCCCCCC-ceeeccchh
Q psy5645 447 ALICILCRER-LGACIQCSVKTCK-TAYHVTCAF 478 (525)
Q Consensus 447 ~l~C~iC~~~-~GacIqCs~~~C~-~aFHvtCA~ 478 (525)
...| +|++. .|.+|+|...+|. .+||..|.-
T Consensus 16 ~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg 48 (71)
T 1wen_A 16 PTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG 48 (71)
T ss_dssp CCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT
T ss_pred CCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC
Confidence 4578 79974 5889999977799 699999974
No 72
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=90.45 E-value=0.14 Score=44.24 Aligned_cols=73 Identities=22% Similarity=0.411 Sum_probs=47.2
Q ss_pred ccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCCC--------CCccccCCCC---------CC
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLGK--------RPECILCPNK---------GG 401 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~~--------~~~C~LCp~~---------gG 401 (525)
.+|.+|+.. .|+.|...+|..|+|.+ .|+|+.|.... ...|..|..- ..
T Consensus 8 ~~C~~C~~~---------~C~~C~~c~~~~~~~~~-----~~~~~~c~~~~~~~~~~~~~~~c~~c~~c~~c~~~~~~~~ 73 (117)
T 4bbq_A 8 RKCKACVQG---------ECGVCHYCRDMKKFGGP-----GRMKQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEK 73 (117)
T ss_dssp SCSHHHHSC---------CCSCSHHHHHSGGGTSC-----CCSCCCCGGGCCSSCBCCTTCBCTTTCCBCCHHHHCCGGG
T ss_pred CcCcCcCCc---------CCCCCCCCcCCcccCCC-----CccccchhheeeccccccccccccccCcccccccccccCc
Confidence 468888875 29999999999987653 47777776531 1234444331 12
Q ss_pred CCccccCCCcccccccccCCCccE
Q psy5645 402 AMKCARSGNKWAHVSCALWIPEVS 425 (525)
Q Consensus 402 alK~t~~g~~WvHv~CAlwipev~ 425 (525)
.|........|+|..|.-...+..
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~ 97 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGL 97 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCE
T ss_pred ceEEeeecCCeEECCCCCCCcccc
Confidence 355555567999999986554443
No 73
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=90.40 E-value=0.14 Score=43.15 Aligned_cols=31 Identities=26% Similarity=0.772 Sum_probs=25.5
Q ss_pred ccccccccCCC-CCceeecCCCCCC-ceeeccch
Q psy5645 446 WALICILCRER-LGACIQCSVKTCK-TAYHVTCA 477 (525)
Q Consensus 446 ~~l~C~iC~~~-~GacIqCs~~~C~-~aFHvtCA 477 (525)
....| +|++. .|.+|+|+..+|. .+||..|.
T Consensus 25 ~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CV 57 (90)
T 2jmi_A 25 EEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCV 57 (90)
T ss_dssp CSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTS
T ss_pred CCcEE-EeCCCCCCCEEEecCCCCccccCcCccC
Confidence 34678 89973 6889999977777 79999997
No 74
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=89.66 E-value=0.17 Score=38.92 Aligned_cols=30 Identities=33% Similarity=0.879 Sum_probs=26.0
Q ss_pred cccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+.. |.+|.|+ .|..+||..|...
T Consensus 5 ~~~C~vC~~~-g~ll~Cd--~C~~~fH~~Cl~p 34 (60)
T 2puy_A 5 EDFCSVCRKS-GQLLMCD--TCSRVYHLDCLDP 34 (60)
T ss_dssp CSSCTTTCCC-SSCEECS--SSSCEECGGGSSS
T ss_pred CCCCcCCCCC-CcEEEcC--CCCcCEECCcCCC
Confidence 3479999975 8999999 8999999999864
No 75
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=89.51 E-value=0.17 Score=40.53 Aligned_cols=30 Identities=30% Similarity=0.618 Sum_probs=24.7
Q ss_pred cccccccCCC--CCceeecCCCCCCceeeccchh
Q psy5645 447 ALICILCRER--LGACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 447 ~l~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~ 478 (525)
...|.+|++. .+.+|+|. .|..+||..|.-
T Consensus 18 ~~~C~~C~~~~~~~~mi~CD--~C~~wfH~~Cv~ 49 (75)
T 2k16_A 18 IWICPGCNKPDDGSPMIGCD--DCDDWYHWPCVG 49 (75)
T ss_dssp EECBTTTTBCCSSCCEEECS--SSSSEEEHHHHT
T ss_pred CcCCCCCCCCCCCCCEEEcC--CCCcccccccCC
Confidence 3579999976 24699999 799999999973
No 76
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=89.46 E-value=0.19 Score=38.09 Aligned_cols=30 Identities=33% Similarity=0.879 Sum_probs=26.1
Q ss_pred cccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+.. |.+|.|. .|..+||..|...
T Consensus 9 ~~~C~vC~~~-g~ll~Cd--~C~~~~H~~Cl~p 38 (56)
T 2yql_A 9 EDFCSVCRKS-GQLLMCD--TCSRVYHLDCLDP 38 (56)
T ss_dssp CCSCSSSCCS-SCCEECS--SSSCEECSSSSSS
T ss_pred CCCCccCCCC-CeEEEcC--CCCcceECccCCC
Confidence 4579999975 8999999 8999999999864
No 77
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=89.39 E-value=0.18 Score=42.70 Aligned_cols=27 Identities=30% Similarity=0.648 Sum_probs=22.5
Q ss_pred cccccCCC--CCceeecCCCCCCceeeccchh
Q psy5645 449 ICILCRER--LGACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 449 ~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~ 478 (525)
.| +|+.. .|.+|+|. .|..+||..|.-
T Consensus 30 rC-iC~~~~~~~~mi~Cd--~C~~w~H~~C~~ 58 (98)
T 2lv9_A 30 RC-ICGFTHDDGYMICCD--KCSVWQHIDCMG 58 (98)
T ss_dssp CC-TTSCCSCSSCEEEBT--TTCBEEETTTTT
T ss_pred Ee-ECCCccCCCcEEEcC--CCCCcCcCcCCC
Confidence 56 78764 48899999 799999999973
No 78
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=88.93 E-value=0.17 Score=40.10 Aligned_cols=29 Identities=28% Similarity=0.794 Sum_probs=24.9
Q ss_pred ccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.+|+. .|.+|.|+ .|..+||..|...
T Consensus 13 ~~C~vC~~-~~~ll~Cd--~C~~~~H~~Cl~P 41 (66)
T 2lri_C 13 ARCGVCGD-GTDVLRCT--HCAAAFHWRCHFP 41 (66)
T ss_dssp CCCTTTSC-CTTCEECS--SSCCEECHHHHCT
T ss_pred CCcCCCCC-CCeEEECC--CCCCceecccCCC
Confidence 46999996 48899999 7999999999743
No 79
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=88.92 E-value=0.21 Score=38.61 Aligned_cols=31 Identities=35% Similarity=0.803 Sum_probs=26.6
Q ss_pred ccccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 446 WALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 446 ~~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
....|.+|+.. |.+|.|. .|..+||..|...
T Consensus 10 ~~~~C~vC~~~-g~ll~CD--~C~~~fH~~Cl~p 40 (61)
T 2l5u_A 10 HQDYCEVCQQG-GEIILCD--TCPRAYHMVCLDP 40 (61)
T ss_dssp CCSSCTTTSCC-SSEEECS--SSSCEEEHHHHCT
T ss_pred CCCCCccCCCC-CcEEECC--CCChhhhhhccCC
Confidence 34579999974 8999999 8999999999854
No 80
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=88.92 E-value=0.22 Score=39.11 Aligned_cols=31 Identities=32% Similarity=0.765 Sum_probs=26.3
Q ss_pred ccccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 446 WALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 446 ~~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
....|.+|+.. |.+|.|+ .|..+||..|...
T Consensus 7 ~~~~C~vC~~~-g~ll~CD--~C~~~fH~~Cl~p 37 (66)
T 1xwh_A 7 NEDECAVCRDG-GELICCD--GCPRAFHLACLSP 37 (66)
T ss_dssp CCCSBSSSSCC-SSCEECS--SCCCEECTTTSSS
T ss_pred CCCCCccCCCC-CCEEEcC--CCChhhcccccCC
Confidence 34579999974 8999999 7999999999753
No 81
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=88.80 E-value=0.39 Score=44.12 Aligned_cols=91 Identities=20% Similarity=0.368 Sum_probs=58.3
Q ss_pred CCCCCCCHHHHHHHHHHHhccc---------hhhhhhhhhcc------cCCcccccCcccccccCCCCCCCCCcEEEccC
Q psy5645 296 PGLPAIQEDRLEKMIAELEVRC---------WDKVQTIIKEE------EGLGLEFDENVICDVCRSPDSEEGNEMVFCDC 360 (525)
Q Consensus 296 ~~~~~~~~~~~e~~i~~lE~~~---------~~~~~~~~~~~------~~~~~e~ded~~C~VC~~~e~ed~N~lv~CD~ 360 (525)
..+..||++.-+.|++-|++.. -..+...+... -+....+ .+..|.+|...-.--.|.=..|..
T Consensus 12 ~dLs~LteeEr~~Il~VL~Rd~~l~~~EeeRi~kLk~~l~~~~~k~~~~~~~~~~-~~~~C~~C~~~fg~l~~~g~~C~~ 90 (153)
T 2zet_C 12 LDLSTLTDEEAEHVWAVVQRDFDLRRREEERLQGLKGKIQKESSKRELLSDTAHL-NETHCARCLQPYRLLLNSRRQCLE 90 (153)
T ss_dssp CCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTG-GGTBCTTTCCBGGGCSSCCEECTT
T ss_pred CCcccCCHHHHHHHHHHHHhHHHHHHhHHHHHHHHHHHHHHHHHHhhhhcccccC-CCccchhhcCccccccCCCCcCCC
Confidence 3567788887777776665421 01111111111 0111122 457999999975555678899999
Q ss_pred CCceeccccccccccCCCCccceeecCC
Q psy5645 361 CNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 361 C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
|...|-+.|- +..-.++.|+|..|...
T Consensus 91 C~~~VC~~C~-~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 91 CSLFVCKSCS-HAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp TCCEECGGGE-ECCSSSSSCEEHHHHHH
T ss_pred CCchhhcccc-cccCCCCcEeeHHHHHH
Confidence 9999999994 43446788999999874
No 82
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=88.45 E-value=0.15 Score=46.92 Aligned_cols=29 Identities=31% Similarity=0.776 Sum_probs=24.6
Q ss_pred ccccccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 446 WALICILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 446 ~~l~C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
....| +|++. .|.+|||. .|..+||..|.
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd--~C~~WfH~~Cv 38 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCD--RCQNWYHGRCV 38 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECC--CCCchhChhhc
Confidence 45678 99975 46799999 79999999997
No 83
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=88.35 E-value=0.27 Score=36.74 Aligned_cols=28 Identities=21% Similarity=0.526 Sum_probs=23.3
Q ss_pred cccccCCCC---CceeecCCCCCCceeeccch
Q psy5645 449 ICILCRERL---GACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 449 ~C~iC~~~~---GacIqCs~~~C~~aFHvtCA 477 (525)
.|.+|++.. +.+|||.. .|..+||..|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~-~C~~WfH~~Cv 34 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDG-GCDEWFHQVCV 34 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTT-TTCCEEETTTT
T ss_pred cCCCCcCccCCCCcEEEeCC-CCCccCccccc
Confidence 477888763 45999996 79999999996
No 84
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=88.23 E-value=0.2 Score=38.76 Aligned_cols=31 Identities=29% Similarity=0.825 Sum_probs=26.2
Q ss_pred ccccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 446 WALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 446 ~~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
....|.+|+. .|.+|.|. .|..+||..|...
T Consensus 8 ~~~~C~vC~~-~g~ll~Cd--~C~~~fH~~Cl~p 38 (61)
T 1mm2_A 8 HMEFCRVCKD-GGELLCCD--TCPSSYHIHCLNP 38 (61)
T ss_dssp SCSSCTTTCC-CSSCBCCS--SSCCCBCSSSSSS
T ss_pred CCCcCCCCCC-CCCEEEcC--CCCHHHcccccCC
Confidence 3457999997 48899999 7999999999764
No 85
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=87.26 E-value=0.34 Score=41.62 Aligned_cols=29 Identities=28% Similarity=0.701 Sum_probs=25.0
Q ss_pred ccccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 448 LICILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 448 l~C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
..|.+|++. .|.+|+|. ..|..+||..|.
T Consensus 4 ~~C~iC~~p~~~~~~mi~Cd-d~C~~WfH~~CV 35 (105)
T 2xb1_A 4 YPCGACRSEVNDDQDAILCE-ASCQKWFHRECT 35 (105)
T ss_dssp CBCTTTCSBCCTTSCEEECT-TTTCCEEEGGGT
T ss_pred CCCCCCCCccCCCCCEEEec-CCcccccccccC
Confidence 369999987 47799998 489999999996
No 86
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=87.05 E-value=0.24 Score=39.77 Aligned_cols=27 Identities=33% Similarity=0.885 Sum_probs=22.3
Q ss_pred ccccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 448 LICILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 448 l~C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
..| +|++. .+.+|||. .|..+||..|.
T Consensus 11 ~yC-iC~~~~~~~~~MI~Cd--~C~~WfH~~Cv 40 (75)
T 3kqi_A 11 VYC-VCRLPYDVTRFMIECD--ACKDWFHGSCV 40 (75)
T ss_dssp EET-TTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred eEE-ECCCcCCCCCCEEEcC--CCCCCEecccc
Confidence 445 88875 35799999 69999999998
No 87
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=86.40 E-value=0.3 Score=36.12 Aligned_cols=29 Identities=31% Similarity=0.797 Sum_probs=24.1
Q ss_pred cccccCCC--CCceeecCCCCCCceeeccchhc
Q psy5645 449 ICILCRER--LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 449 ~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
.|.+|++. .+.+|.|+ .|..+||..|...
T Consensus 2 ~C~vC~~~~~~~~ll~Cd--~C~~~~H~~Cl~p 32 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCD--ECNKAFHLFCLRP 32 (51)
T ss_dssp CCTTTCCSSCCSCCEECT--TTCCEECHHHHCT
T ss_pred CCCCCCCCCCCCCEEECC--CCChhhCcccCCC
Confidence 58999975 24699999 8999999999854
No 88
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=85.80 E-value=0.41 Score=37.71 Aligned_cols=29 Identities=24% Similarity=0.765 Sum_probs=24.4
Q ss_pred ccccccCCCC---CceeecCCCCCCceeeccch
Q psy5645 448 LICILCRERL---GACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 448 l~C~iC~~~~---GacIqCs~~~C~~aFHvtCA 477 (525)
..|.+|++.. ..+|+|.. .|..+||..|.
T Consensus 9 ~~C~~C~~p~~~~~~mI~CD~-~C~~WfH~~Cv 40 (65)
T 2vpb_A 9 YPCGICTNEVNDDQDAILCEA-SCQKWFHRICT 40 (65)
T ss_dssp CBCTTTCSBCCTTSCEEEBTT-TTCCEEEHHHH
T ss_pred CcCccCCCccCCCCCeEeccc-CccccCchhcc
Confidence 3699999863 35999994 89999999996
No 89
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=85.54 E-value=0.51 Score=35.17 Aligned_cols=26 Identities=31% Similarity=0.682 Sum_probs=21.3
Q ss_pred cccCCC--CCceeecCCCCCCceeeccchh
Q psy5645 451 ILCRER--LGACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 451 ~iC~~~--~GacIqCs~~~C~~aFHvtCA~ 478 (525)
.+|++. .+.+|||. .|..+||..|+-
T Consensus 7 C~C~~~~~~~~MI~Cd--~C~~W~H~~Cvg 34 (52)
T 3o7a_A 7 CFCMKPFAGRPMIECN--ECHTWIHLSCAK 34 (52)
T ss_dssp STTCCBCTTCCEEECT--TTCCEEETTTTT
T ss_pred EEeCCcCCCCCEEEcC--CCCccccccccC
Confidence 468765 35899999 699999999973
No 90
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=84.20 E-value=0.31 Score=41.99 Aligned_cols=36 Identities=25% Similarity=0.688 Sum_probs=27.3
Q ss_pred CcEEEccCCCceeccccccccc--cC----CCCccceeecCC
Q psy5645 353 NEMVFCDCCNICVHQACYGITT--IP----SGSWLCRTCVLG 388 (525)
Q Consensus 353 N~lv~CD~C~i~VHq~CYgi~~--iP----eg~WlC~~C~~~ 388 (525)
..|+.|+.|+..||..|.++.. ++ .+.|.|..|...
T Consensus 73 ~~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~ 114 (117)
T 4bbq_A 73 KKLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQE 114 (117)
T ss_dssp GSCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC--
T ss_pred cceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCC
Confidence 4699999999999999998742 22 235999999753
No 91
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=83.90 E-value=0.55 Score=36.44 Aligned_cols=30 Identities=27% Similarity=0.774 Sum_probs=25.5
Q ss_pred ccccccCCC----CCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRER----LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~----~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.+|+.. .+.+|.|. .|..+||..|...
T Consensus 7 ~~C~vC~~~~~~~~~~ll~Cd--~C~~~~H~~C~~p 40 (66)
T 2yt5_A 7 GVCTICQEEYSEAPNEMVICD--KCGQGYHQLCHTP 40 (66)
T ss_dssp CCBSSSCCCCCBTTBCEEECS--SSCCEEETTTSSS
T ss_pred CCCCCCCCCCCCCCCCEEECC--CCChHHHhhhCCC
Confidence 579999975 27899999 8999999999754
No 92
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=83.06 E-value=0.61 Score=37.11 Aligned_cols=28 Identities=32% Similarity=0.803 Sum_probs=23.8
Q ss_pred cccccCCC--CCceeecCCCCCCceeeccchh
Q psy5645 449 ICILCRER--LGACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 449 ~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~ 478 (525)
.|.+|++. .|.+|.|+ .|..+||..|.-
T Consensus 20 ~C~~C~~~~~~~~ll~CD--~C~~~yH~~Cl~ 49 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLD 49 (70)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEEGGGSS
T ss_pred CCcCCCCcCCCCCEEEcC--CCCCceecccCC
Confidence 57888864 57899999 899999999975
No 93
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=82.79 E-value=1.3 Score=39.78 Aligned_cols=53 Identities=28% Similarity=0.558 Sum_probs=41.4
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccc--cCCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITT--IPSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~--iPeg~WlC~~C~~~ 388 (525)
+....|.+|...-.--+|.=..|..|...|-+.|-+... -.+..|+|..|...
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 456799999998765557779999999999999965432 23457999999874
No 94
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.32 E-value=0.62 Score=37.14 Aligned_cols=30 Identities=23% Similarity=0.676 Sum_probs=23.6
Q ss_pred ccccccCCC-CCceeecCCCCC-Cceeeccchh
Q psy5645 448 LICILCRER-LGACIQCSVKTC-KTAYHVTCAF 478 (525)
Q Consensus 448 l~C~iC~~~-~GacIqCs~~~C-~~aFHvtCA~ 478 (525)
..| +|++. .|.+|+|+..+| ..+||..|.-
T Consensus 7 ~yC-~C~~~~~g~MI~CD~cdC~~~WfH~~Cvg 38 (70)
T 1x4i_A 7 GYC-ICNQVSYGEMVGCDNQDCPIEWFHYGCVG 38 (70)
T ss_dssp CCS-TTSCCCCSSEECCSCTTCSCCCEEHHHHT
T ss_pred eEE-EcCCCCCCCEeEeCCCCCCccCCcccccc
Confidence 456 48863 689999997777 4899999974
No 95
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=82.20 E-value=0.39 Score=40.06 Aligned_cols=73 Identities=25% Similarity=0.358 Sum_probs=44.5
Q ss_pred CCCCCCHHHHHHHHHHHhccch---hhhhhhhhcccCCcccccCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 297 GLPAIQEDRLEKMIAELEVRCW---DKVQTIIKEEEGLGLEFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 297 ~~~~~~~~~~e~~i~~lE~~~~---~~~~~~~~~~~~~~~e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
...++|++.++++-..|.+++= ..|....-..-.+.+.......|++|... ..+-...|..|+..+|..|...
T Consensus 3 ~a~pfte~~~~~~~~~lhe~Ca~lP~~i~Hp~Hp~H~L~L~~~~~~~C~~C~~~---~~~~~Y~C~~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 3 SGSSGTEERLKEIEAKYDEIAKDWPKKVKHVLHEEHELELTRVQVYTCDKCEEE---GTIWSYHCDECDFDLHAKCALN 78 (89)
T ss_dssp CCCCCCSSCCSHHHHHHHHHTSSSCSEECCSTTTTSCEEEECCSSCCCTTTSCC---CCSCEEECTTTCCCCCHHHHHC
T ss_pred cccccCHHHHHHHHHHHhHHHHcCCceecCCCCCCCccEEeeCCCeEeCCCCCc---CCCcEEEcCCCCCeEcHHhcCC
Confidence 3456788777777666665542 12221111111122222224679999985 2357789999999999999765
No 96
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=81.73 E-value=0.66 Score=38.85 Aligned_cols=30 Identities=30% Similarity=0.939 Sum_probs=26.0
Q ss_pred cccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+.. |..|.|. .|..+||..|...
T Consensus 25 ~~~C~vC~~~-g~LL~CD--~C~~~fH~~Cl~P 54 (88)
T 1fp0_A 25 ATICRVCQKP-GDLVMCN--QCEFCFHLDCHLP 54 (88)
T ss_dssp SSCCSSSCSS-SCCEECT--TSSCEECTTSSST
T ss_pred CCcCcCcCCC-CCEEECC--CCCCceecccCCC
Confidence 4579999975 8899999 8999999999854
No 97
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.19 E-value=0.85 Score=37.04 Aligned_cols=29 Identities=28% Similarity=0.757 Sum_probs=24.8
Q ss_pred cccccCCC--CCceeecCCCCCCceeeccchhc
Q psy5645 449 ICILCRER--LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 449 ~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
.|.+|++. .|.+|.|+ .|..+||..|...
T Consensus 28 ~C~vC~~~~~~~~ll~CD--~C~~~yH~~Cl~P 58 (77)
T 2e6s_A 28 SCRVCGGKHEPNMQLLCD--ECNVAYHIYCLNP 58 (77)
T ss_dssp SCSSSCCCCCSTTEEECS--SSCCEEETTSSSS
T ss_pred CCcCcCCcCCCCCEEEcC--CCCccccccccCC
Confidence 58999964 58899999 8999999999753
No 98
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=81.05 E-value=0.9 Score=36.33 Aligned_cols=31 Identities=23% Similarity=0.569 Sum_probs=25.7
Q ss_pred cccccccCCCC----CceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRERL----GACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~~----GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+... +..|.|+ .|..+||..|.-.
T Consensus 16 ~~~C~vC~~~~s~~~~~ll~CD--~C~~~~H~~Cl~~ 50 (71)
T 2ku3_A 16 DAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGV 50 (71)
T ss_dssp SCSCSSSCCCCCCSSSCEEECS--SSCCEEEHHHHTC
T ss_pred CCCCCCCCCCCCCCCCCEEECC--CCCCccccccCCC
Confidence 45799998652 5899999 8999999999754
No 99
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=80.73 E-value=0.88 Score=37.74 Aligned_cols=31 Identities=29% Similarity=0.833 Sum_probs=25.9
Q ss_pred cccccccCCC----CCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRER----LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~----~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+.. .+.+|.|. .|..+||..|...
T Consensus 16 ~~~C~vC~~~~~~~~~~ll~CD--~C~~~yH~~Cl~P 50 (88)
T 1wev_A 16 GLACVVCRQMTVASGNQLVECQ--ECHNLYHQDCHKP 50 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECS--SSCCEEETTTSSS
T ss_pred CCcCCCCCCCCCCCCCceEECC--CCCCeEcCccCCC
Confidence 4579999976 26899999 7999999999754
No 100
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=79.04 E-value=0.82 Score=42.50 Aligned_cols=29 Identities=24% Similarity=0.834 Sum_probs=24.7
Q ss_pred ccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.+|+.. |..|.|+ +|..+||..|...
T Consensus 5 ~~C~~C~~~-g~ll~Cd--~C~~~~H~~C~~p 33 (184)
T 3o36_A 5 DWCAVCQNG-GELLCCE--KCPKVFHLSCHVP 33 (184)
T ss_dssp SSCTTTCCC-SSCEECS--SSSCEECTTTSSS
T ss_pred CccccCCCC-CeeeecC--CCCcccCccccCC
Confidence 469999964 8899999 7999999999643
No 101
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=78.23 E-value=1.2 Score=42.05 Aligned_cols=28 Identities=29% Similarity=0.727 Sum_probs=23.5
Q ss_pred ccccccCCCC------CceeecCCCCCCceeeccch
Q psy5645 448 LICILCRERL------GACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 448 l~C~iC~~~~------GacIqCs~~~C~~aFHvtCA 477 (525)
..|.+|++.. +.+|||+ .|..+||..|.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd--~C~~W~H~~Cv 36 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCG--KCDRWVHSKCE 36 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECT--TTCCEEEGGGS
T ss_pred CcCCCCcCccCCcccCCCeEECC--CCCcccchhcc
Confidence 4699999752 2499999 89999999997
No 102
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=77.28 E-value=2 Score=31.11 Aligned_cols=35 Identities=31% Similarity=0.639 Sum_probs=25.7
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+++..|.||++.-. +++..+....|+-.||..|..
T Consensus 3 ~~~~~C~IC~~~~~-~~~~~~~~~~C~H~f~~~Ci~ 37 (55)
T 1iym_A 3 DDGVECAVCLAELE-DGEEARFLPRCGHGFHAECVD 37 (55)
T ss_dssp CCSCCCTTTCCCCC-TTSCCEECSSSCCEECTTHHH
T ss_pred CCCCcCccCCcccc-CCCceEECCCCCCcccHHHHH
Confidence 45578999998643 334556666899999999975
No 103
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=76.51 E-value=0.98 Score=42.84 Aligned_cols=29 Identities=28% Similarity=0.842 Sum_probs=24.8
Q ss_pred ccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.+|+.. |..|.|+ +|..+||..|...
T Consensus 8 ~~C~~C~~~-g~ll~Cd--~C~~~~H~~Cl~p 36 (207)
T 3u5n_A 8 DWCAVCQNG-GDLLCCE--KCPKVFHLTCHVP 36 (207)
T ss_dssp SSBTTTCCC-EEEEECS--SSSCEECTTTSSS
T ss_pred CCCCCCCCC-CceEEcC--CCCCccCCccCCC
Confidence 469999964 8899999 7999999999753
No 104
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=75.60 E-value=1.1 Score=37.22 Aligned_cols=32 Identities=22% Similarity=0.540 Sum_probs=25.7
Q ss_pred cccccccCCCC----CceeecCCCCCCceeeccchhcc
Q psy5645 447 ALICILCRERL----GACIQCSVKTCKTAYHVTCAFKH 480 (525)
Q Consensus 447 ~l~C~iC~~~~----GacIqCs~~~C~~aFHvtCA~~a 480 (525)
...|.+|+... +.+|.|+ .|..+||..|.-..
T Consensus 25 ~~~C~vC~~~~s~~~~~ll~CD--~C~~~fH~~Cl~p~ 60 (88)
T 2l43_A 25 DAVCSICMDGESQNSNVILFCD--MCNLAVHQECYGVP 60 (88)
T ss_dssp CCCCSSCCSSSSCSEEEEEECS--SSCCCCCHHHHTCS
T ss_pred CCcCCcCCCCCCCCCCCEEECC--CCCchhhcccCCCC
Confidence 35799999641 2799999 89999999997543
No 105
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.14 E-value=1.2 Score=37.23 Aligned_cols=29 Identities=28% Similarity=0.805 Sum_probs=24.3
Q ss_pred ccccccCCCC--CceeecCCCCCCceeeccchh
Q psy5645 448 LICILCRERL--GACIQCSVKTCKTAYHVTCAF 478 (525)
Q Consensus 448 l~C~iC~~~~--GacIqCs~~~C~~aFHvtCA~ 478 (525)
..|.+|+... +.+|.|. .|..+||..|.-
T Consensus 17 ~~C~vC~~~~~~~~ll~CD--~C~~~~H~~Cl~ 47 (92)
T 2e6r_A 17 YICQVCSRGDEDDKLLFCD--GCDDNYHIFCLL 47 (92)
T ss_dssp CCCSSSCCSGGGGGCEECT--TTCCEECSSSSS
T ss_pred CCCccCCCcCCCCCEEEcC--CCCchhccccCC
Confidence 3699999752 3599999 799999999985
No 106
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.18 E-value=0.92 Score=36.87 Aligned_cols=52 Identities=23% Similarity=0.490 Sum_probs=30.1
Q ss_pred cCcccccccCCCCCCCCCcEEE---ccCCCceeccccccccccCCCCccceeecCC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVF---CDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~---CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
.++..|.||++... +++.++. |.+..-.||+.|..-=..-.+...|..|...
T Consensus 13 ~~~~~C~IC~~~~~-~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~ 67 (80)
T 2d8s_A 13 SSQDICRICHCEGD-DESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 67 (80)
T ss_dssp TTSCCCSSSCCCCC-SSSCEECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCB
T ss_pred CCCCCCeEcCcccc-CCCeeEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCe
Confidence 44578999997543 3456652 2334589999997521111233456666553
No 107
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=73.64 E-value=1 Score=37.45 Aligned_cols=34 Identities=21% Similarity=0.572 Sum_probs=29.1
Q ss_pred ccccccCCC-CCceeecCCCCCCceeeccchhccCCe
Q psy5645 448 LICILCRER-LGACIQCSVKTCKTAYHVTCAFKHGLE 483 (525)
Q Consensus 448 l~C~iC~~~-~GacIqCs~~~C~~aFHvtCA~~aGl~ 483 (525)
-.|.+|++. .+..+.|. -|.+.||..|-.+.|+.
T Consensus 16 ~~C~VC~~~t~~~l~pCR--vC~RvfH~~CL~r~gy~ 50 (89)
T 1wil_A 16 EMCDVCEVWTAESLFPCR--VCTRVFHDGCLRRMGYI 50 (89)
T ss_dssp CCCTTTCCCCSSCCSSCS--SSSSCCCHHHHHHHTSC
T ss_pred cccCccccccccceeccc--cccccccHhhccccccc
Confidence 479999976 46788998 79999999999998865
No 108
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=70.31 E-value=2.3 Score=30.87 Aligned_cols=35 Identities=26% Similarity=0.486 Sum_probs=27.2
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.-..|++|.+.=-.-..+-+.|..|+..+|..|..
T Consensus 10 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 10 SPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp SCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCCcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 34689999875322235788999999999999976
No 109
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.30 E-value=3.5 Score=33.45 Aligned_cols=38 Identities=24% Similarity=0.555 Sum_probs=28.9
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
+..-..|++|...=-.-..+-+.|..|++.+|..|...
T Consensus 25 ~~~pt~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~~ 62 (83)
T 2yuu_A 25 FGQPTFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCIDK 62 (83)
T ss_dssp CSSCCCCSSSCCCCCSSSCCEEEETTTCCEECTTGGGT
T ss_pred CCCCcChhhcChhhccccccccccCCcCCeeChhhhhh
Confidence 34457899998753222357789999999999999874
No 110
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=70.24 E-value=2.1 Score=38.75 Aligned_cols=30 Identities=30% Similarity=0.730 Sum_probs=25.9
Q ss_pred cccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+.. |..|-|+ .|.++||..|...
T Consensus 63 ~d~C~vC~~G-G~LlcCD--~Cpr~Fh~~Cl~p 92 (142)
T 2lbm_A 63 DEQCRWCAEG-GNLICCD--FCHNAFCKKCILR 92 (142)
T ss_dssp BCSCSSSCCC-SSEEECS--SSCCEEEHHHHHH
T ss_pred CCeecccCCC-CcEEeCC--CCCCeeeHhhcCC
Confidence 3579999974 8899998 8999999999864
No 111
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=70.14 E-value=1.6 Score=46.97 Aligned_cols=28 Identities=32% Similarity=0.876 Sum_probs=23.5
Q ss_pred cccccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 447 ALICILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 447 ~l~C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
...| +|++. .|.+|||. .|..+||..|.
T Consensus 37 ~~yC-~C~~~~d~~~~MIqCd--~C~~WfH~~Cv 67 (488)
T 3kv5_D 37 PVYC-VCRQPYDVNRFMIECD--ICKDWFHGSCV 67 (488)
T ss_dssp CEET-TTTEECCTTSCEEEBT--TTCCEEEHHHH
T ss_pred CeEE-eCCCcCCCCCCeEEcc--CCCCceeeeec
Confidence 3456 99875 57899999 69999999998
No 112
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=69.94 E-value=2.1 Score=34.71 Aligned_cols=29 Identities=31% Similarity=0.769 Sum_probs=23.6
Q ss_pred cccccCCC--CCceeecCCCCCCceeeccchhc
Q psy5645 449 ICILCRER--LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 449 ~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
.|.+|++. .+..|.|. .|..+||..|...
T Consensus 28 ~C~vC~~~~d~~~ll~CD--~C~~~yH~~Cl~P 58 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDP 58 (77)
T ss_dssp SBTTTCCCSCGGGEEECT--TTCCEEETTTSSS
T ss_pred cCCccCCCCCCcceeEeC--CCCCccCcccCCC
Confidence 47788865 36789999 8999999999753
No 113
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=69.80 E-value=1.5 Score=41.18 Aligned_cols=29 Identities=28% Similarity=0.944 Sum_probs=24.9
Q ss_pred ccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.+|+.. |..+.|+ +|..+||..|...
T Consensus 3 ~~C~~C~~~-g~ll~Cd--~C~~~~H~~Cl~p 31 (189)
T 2ro1_A 3 TICRVCQKP-GDLVMCN--QCEFCFHLDCHLP 31 (189)
T ss_dssp CCBTTTCCC-SSCCCCT--TTCCBCCSTTSTT
T ss_pred CcCccCCCC-CceeECC--CCCchhccccCCC
Confidence 369999964 8899998 8999999999854
No 114
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=68.50 E-value=0.43 Score=36.77 Aligned_cols=50 Identities=18% Similarity=0.371 Sum_probs=29.4
Q ss_pred cCcccccccCCCCCCCCCcEEE--ccCCCceeccccccccccCCCCccceeecC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVF--CDCCNICVHQACYGITTIPSGSWLCRTCVL 387 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~--CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~ 387 (525)
++...|.||++...+ .-+.- |.+....||+.|..-=....+.+.|..|..
T Consensus 4 ~~~~~CrIC~~~~~~--~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~ 55 (60)
T 1vyx_A 4 EDVPVCWICNEELGN--ERFRACGCTGELENVHRSCLSTWLTISRNTACQICGV 55 (60)
T ss_dssp CSCCEETTTTEECSC--CCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCC
T ss_pred CCCCEeEEeecCCCC--ceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCC
Confidence 345689999986322 12334 334455999999763111234566666655
No 115
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=68.05 E-value=1 Score=38.71 Aligned_cols=35 Identities=26% Similarity=0.711 Sum_probs=28.4
Q ss_pred cEEEccCCCceecccccccc--------ccCC-CCccceeecCC
Q psy5645 354 EMVFCDCCNICVHQACYGIT--------TIPS-GSWLCRTCVLG 388 (525)
Q Consensus 354 ~lv~CD~C~i~VHq~CYgi~--------~iPe-g~WlC~~C~~~ 388 (525)
.||.||.|..-+|-.|-++. .+|+ ..|.|..|...
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~ 44 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 44 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTT
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCcccccc
Confidence 48999999999999999975 2453 46999999764
No 116
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=67.08 E-value=3.5 Score=33.07 Aligned_cols=38 Identities=24% Similarity=0.533 Sum_probs=28.5
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
+..-..|++|.+.=-.-..+-+.|..|+..+|..|...
T Consensus 31 f~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 31 FPQPTFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp CSSCEECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred CCCCcCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 44557899998742222347789999999999999764
No 117
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=66.89 E-value=3.6 Score=31.76 Aligned_cols=37 Identities=22% Similarity=0.498 Sum_probs=27.8
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
..-..|++|...=-.-..+-+.|..|+..+|..|...
T Consensus 21 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 57 (65)
T 2enz_A 21 KSPTFCEHCGTLLWGLARQGLKCDACGMNVHHRCQTK 57 (65)
T ss_dssp CSCCBCSSSCCBCCCSSSCSEEESSSCCEECTTTTTT
T ss_pred CCCcCchhcChhheecCCcccccCCCCCccCHhHHhh
Confidence 3457899998753222347789999999999999763
No 118
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=65.20 E-value=4.3 Score=31.46 Aligned_cols=38 Identities=16% Similarity=0.353 Sum_probs=28.5
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
+..-..|++|...=-.-..+-+.|..|+..+|..|...
T Consensus 21 ~~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~~ 58 (66)
T 1y8f_A 21 ATTPTYCYECEGLLWGIARQGMRCTECGVKCHEKCQDL 58 (66)
T ss_dssp CSSCCCCTTTCCCCCSSCCEEEEETTTCCEECTTHHHH
T ss_pred CCCCcChhhcChhhcccCcceeEcCCCCCeeCHHHHhh
Confidence 34457899998763222347789999999999999763
No 119
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=64.82 E-value=3.3 Score=31.98 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=27.4
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
..-..|++|.+.=-.-..+-+.|..|+..+|..|..
T Consensus 18 ~~pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 18 MSPTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp SSCCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCCcccccChhhhccCceeeECCCCCCeEchhHhh
Confidence 345789999875322234778999999999999976
No 120
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=63.96 E-value=2.8 Score=40.79 Aligned_cols=29 Identities=31% Similarity=0.769 Sum_probs=22.1
Q ss_pred cccccCCC--CCceeecCCCCCCceeeccchhc
Q psy5645 449 ICILCRER--LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 449 ~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
.|.+|+.. .|.++.|+ .|..+||..|.-.
T Consensus 176 ~C~vC~~~~~~~~lL~CD--~C~~~yH~~CL~P 206 (226)
T 3ask_A 176 ACHLCGGRQDPDKQLMCD--ECDMAFHIYCLDP 206 (226)
T ss_dssp SCSSSCCCCC--CCEECS--SSCCEECSCC--C
T ss_pred CCcCCCCCCCCCCeEEcC--CCCcceeCccCCC
Confidence 69999874 57899999 8999999999753
No 121
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=63.54 E-value=6.9 Score=38.05 Aligned_cols=70 Identities=19% Similarity=0.398 Sum_probs=45.3
Q ss_pred CCCCHHHHHHHHHHHhccchhhhhhh-h--------hcccCCcccc-cCcccccccCCCCCCCCCcEEEccCCCceeccc
Q psy5645 299 PAIQEDRLEKMIAELEVRCWDKVQTI-I--------KEEEGLGLEF-DENVICDVCRSPDSEEGNEMVFCDCCNICVHQA 368 (525)
Q Consensus 299 ~~~~~~~~e~~i~~lE~~~~~~~~~~-~--------~~~~~~~~e~-ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~ 368 (525)
..++....|.++++|-..-|...... + .-..-+-..+ +.-..|.+|.+--. .=+.|..|+..+|..
T Consensus 131 k~l~~~eae~lL~~lv~~gWl~~~~g~~~l~~R~l~El~~~l~~~~~~~i~~C~iC~~iv~----~g~~C~~C~~~~H~~ 206 (238)
T 3nw0_A 131 KKMRKKEAEQVLQKFVQNKWLIEKEGEFTLHGRAILEMEQYIRETYPDAVKICNICHSLLI----QGQSCETCGIRMHLP 206 (238)
T ss_dssp SCCCHHHHHHHHHHHHHTTSEEEETTEEEECHHHHHHHHHHHHHHCTTTCCBCTTTCSBCS----SCEECSSSCCEECHH
T ss_pred CCCCHHHHHHHHHHHHHhcchhhhCCEEEecCccHHHHHHHHHHhcCCCCCcCcchhhHHh----CCcccCccChHHHHH
Confidence 57888999999999887777532110 0 0000000001 23467999998644 338999999999999
Q ss_pred cccc
Q psy5645 369 CYGI 372 (525)
Q Consensus 369 CYgi 372 (525)
|+.-
T Consensus 207 C~~~ 210 (238)
T 3nw0_A 207 CVAK 210 (238)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 122
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=63.34 E-value=3.6 Score=36.70 Aligned_cols=32 Identities=28% Similarity=0.687 Sum_probs=26.7
Q ss_pred ccccccccCCCCCceeecCCCCCCceeeccchhcc
Q psy5645 446 WALICILCRERLGACIQCSVKTCKTAYHVTCAFKH 480 (525)
Q Consensus 446 ~~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~a 480 (525)
....|.+|+.. |..|-|+ .|.++||..|....
T Consensus 56 ~~~~C~vC~dG-G~LlcCd--~Cpr~Fc~~Cl~~~ 87 (129)
T 3ql9_A 56 MDEQCRWCAEG-GNLICCD--FCHNAFCKKCILRN 87 (129)
T ss_dssp CBSSCTTTCCC-SEEEECS--SSSCEEEHHHHHHH
T ss_pred CCCcCeecCCC-CeeEecC--CCchhhhHHHhCCC
Confidence 34579999974 8888897 89999999999753
No 123
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=62.22 E-value=1.3 Score=37.21 Aligned_cols=51 Identities=24% Similarity=0.621 Sum_probs=40.3
Q ss_pred CcccccccCCCC--CCCCCcEEEccCCCceeccccccccccCCCCccceeecCC
Q psy5645 337 ENVICDVCRSPD--SEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 337 ed~~C~VC~~~e--~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
...+|.||.+.- ..+++..|-|.-|+..|-..||-- ..-+|.-.|.+|...
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEY-ErkeG~q~CpqCktr 67 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEY-ERREGTQNCPQCKTR 67 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHH-HHHTSCSSCTTTCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHH-HHhccCccccccCCc
Confidence 346999999864 457779999999999999999975 345777778877653
No 124
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.99 E-value=5.7 Score=32.43 Aligned_cols=37 Identities=27% Similarity=0.475 Sum_probs=28.1
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
..-..|++|...=-.-..+-+.|..|+..+|..|...
T Consensus 26 ~~pt~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~~ 62 (85)
T 2eli_A 26 GSPTFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVIN 62 (85)
T ss_dssp SSCCBCSSSCCBCCCSSSCEEECSSSCCEEETTTTTT
T ss_pred CCCcCCcccCccccccccCCCcCCCcCCccCHhHHhh
Confidence 3457899998753222357789999999999999764
No 125
>2qfa_C Inner centromere protein; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens}
Probab=61.36 E-value=2.4 Score=31.34 Aligned_cols=21 Identities=29% Similarity=0.642 Sum_probs=19.3
Q ss_pred cCCchhhHHHHHHHhHHHHhc
Q psy5645 143 YDLDDCDIAWLNILNGERACM 163 (525)
Q Consensus 143 ydld~~d~~wl~~~n~e~~~~ 163 (525)
+++|..|..||+.+-+|-.+|
T Consensus 24 ~~vdnk~mvWL~EIeeEA~RM 44 (47)
T 2qfa_C 24 CNMDNKDLVWLEEIQEEAERM 44 (47)
T ss_dssp HHHHHTHHHHHHHHHHHHHHH
T ss_pred HhccchhhHHHHHHHHHHHHH
Confidence 588999999999999998887
No 126
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.14 E-value=3.6 Score=33.05 Aligned_cols=30 Identities=33% Similarity=0.697 Sum_probs=24.6
Q ss_pred ccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.||+.-.-..+.|. .|...||..|..+
T Consensus 16 ~~C~IC~~~i~~g~~C~--~C~h~fH~~Ci~k 45 (74)
T 2ct0_A 16 KICNICHSLLIQGQSCE--TCGIRMHLPCVAK 45 (74)
T ss_dssp CBCSSSCCBCSSSEECS--SSCCEECHHHHHH
T ss_pred CcCcchhhHcccCCccC--CCCchhhHHHHHH
Confidence 46999997654567887 8999999999964
No 127
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=61.04 E-value=3.5 Score=30.17 Aligned_cols=32 Identities=22% Similarity=0.519 Sum_probs=25.8
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
.-..|++|.+.=- +-+.|..|+..+|..|...
T Consensus 13 ~pt~C~~C~~~l~----qG~~C~~C~~~~H~~C~~~ 44 (52)
T 1faq_A 13 KLAFCDICQKFLL----NGFRCQTCGYKFHEHCSTK 44 (52)
T ss_dssp SCEECTTSSSEEC----SEEECTTTTCCBCSTTSSS
T ss_pred CCcCCCCcccccc----cCCEeCCCCCeEChhHHhh
Confidence 3478999987521 6789999999999999764
No 128
>2csz_A Synaptotagmin-like protein 4; exophilin 2, granuphilin, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.10 E-value=3.1 Score=33.88 Aligned_cols=51 Identities=24% Similarity=0.586 Sum_probs=40.4
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVL 387 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~ 387 (525)
.+....|.-|...-.--.|.=..|..|..-|-+.| ++.. ..+.|+|..|..
T Consensus 22 ~~~~r~CarC~~~LG~l~~~g~~C~~Ck~rVC~~C-rv~~-~~~~W~C~VC~k 72 (76)
T 2csz_A 22 HYSDRTCARCQESLGRLSPKTNTCRGCNHLVCRDC-RIQE-SNGTWRCKVCSG 72 (76)
T ss_dssp TCCCCBCSSSCCBCSSSCTTTSEETTTTEECCTTS-EEEC-STTCEEEHHHHS
T ss_pred CCCccchhhhCccccccccCCCcCcccChhhcccc-cccC-CCCCEEEeeCch
Confidence 35567999999987766677789999999999999 4432 348899999965
No 129
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=59.29 E-value=3 Score=38.50 Aligned_cols=45 Identities=24% Similarity=0.722 Sum_probs=35.4
Q ss_pred ccccccCCCCCCCCCcEEEcc--CCCceeccccccccc--------cCCCCccceeecCC
Q psy5645 339 VICDVCRSPDSEEGNEMVFCD--CCNICVHQACYGITT--------IPSGSWLCRTCVLG 388 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD--~C~i~VHq~CYgi~~--------iPeg~WlC~~C~~~ 388 (525)
..|.+|.++ ++++.|| .|..+|-..|..... +.+..|.|=.|.-.
T Consensus 80 ~yC~wC~~G-----g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~ 134 (159)
T 3a1b_A 80 SYCTICCGG-----REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHK 134 (159)
T ss_dssp SSCTTTSCC-----SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSS
T ss_pred ceeeEecCC-----CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCc
Confidence 589999975 7999999 799999999986421 35678888777653
No 130
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=57.99 E-value=5.9 Score=31.48 Aligned_cols=33 Identities=21% Similarity=0.528 Sum_probs=27.2
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
..-..|+.|.+.= ...-+.|..|+..+|..|..
T Consensus 33 ~~pt~C~~C~~~l---~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 33 GGPGWCDLCGREV---LRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp SSCCBCTTTSSBC---SSCCEECTTSSCEECTGGGG
T ss_pred CCCcchhhhhHHH---HhCcCccCCCCCeechhhhc
Confidence 4457899998764 45778999999999999975
No 131
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=55.62 E-value=3.8 Score=43.62 Aligned_cols=26 Identities=31% Similarity=0.728 Sum_probs=22.4
Q ss_pred ccccCCC---CCceeecCCCCCCceeeccch
Q psy5645 450 CILCRER---LGACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 450 C~iC~~~---~GacIqCs~~~C~~aFHvtCA 477 (525)
.++|++. .|.+|||. .|..+||..|.
T Consensus 7 yCiC~~~~d~~~~MIqCD--~C~~WfH~~CV 35 (447)
T 3kv4_A 7 YCLCRLPYDVTRFMIECD--MCQDWFHGSCV 35 (447)
T ss_dssp ETTTTEECCTTSCEEECT--TTCCEEEHHHH
T ss_pred EEeCCCcCCCCCCeEEcC--CCCcccccccC
Confidence 4588875 48899999 79999999998
No 132
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.42 E-value=5.4 Score=32.01 Aligned_cols=32 Identities=31% Similarity=0.691 Sum_probs=25.0
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+....|.||++.-. .=+.|..|+..||..|..
T Consensus 13 ~~i~~C~IC~~~i~----~g~~C~~C~h~fH~~Ci~ 44 (74)
T 2ct0_A 13 DAVKICNICHSLLI----QGQSCETCGIRMHLPCVA 44 (74)
T ss_dssp SSSCBCSSSCCBCS----SSEECSSSCCEECHHHHH
T ss_pred CCCCcCcchhhHcc----cCCccCCCCchhhHHHHH
Confidence 34468999998643 235899999999999976
No 133
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=54.36 E-value=12 Score=31.08 Aligned_cols=34 Identities=24% Similarity=0.732 Sum_probs=28.0
Q ss_pred CcEEEccCCC-ceeccccccccccCCCCccceeecC
Q psy5645 353 NEMVFCDCCN-ICVHQACYGITTIPSGSWLCRTCVL 387 (525)
Q Consensus 353 N~lv~CD~C~-i~VHq~CYgi~~iPeg~WlC~~C~~ 387 (525)
-+|+.|..|+ .+.|..|..+. -....|.|..|..
T Consensus 44 W~L~lC~~Cgs~gtH~~Cs~l~-~~~~~weC~~C~~ 78 (85)
T 1weq_A 44 WRLILCATCGSHGTHRDCSSLR-PNSKKWECNECLP 78 (85)
T ss_dssp TBCEECSSSCCCEECSGGGTCC-TTCSCCCCTTTSC
T ss_pred EEEEeCcccCCchhHHHHhCCc-CCCCCEECCcCcc
Confidence 3999999998 57999997763 3467899999985
No 134
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=53.36 E-value=15 Score=37.66 Aligned_cols=37 Identities=24% Similarity=0.503 Sum_probs=29.7
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+..-..|.+|...-..-.+.-..|..|+..||..|.+
T Consensus 354 ~~~~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~ 390 (406)
T 2vrw_B 354 FEETTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLG 390 (406)
T ss_dssp CSSCCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGG
T ss_pred CCCCCCCccccchhceeCCCCCCCCCCcCccchhhhh
Confidence 3455799999986433456888999999999999976
No 135
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=52.93 E-value=10 Score=35.51 Aligned_cols=53 Identities=17% Similarity=0.328 Sum_probs=33.0
Q ss_pred CcEEEccCCCceeccccccccc---cCCCCccceeecCCCCCccccCCCCC-CCCccccCCCccccc
Q psy5645 353 NEMVFCDCCNICVHQACYGITT---IPSGSWLCRTCVLGKRPECILCPNKG-GAMKCARSGNKWAHV 415 (525)
Q Consensus 353 N~lv~CD~C~i~VHq~CYgi~~---iPeg~WlC~~C~~~~~~~C~LCp~~g-GalK~t~~g~~WvHv 415 (525)
-.|++|++|..-||..|.+... +|- .++ -...|..|...| -.+++.. ..|+|+
T Consensus 18 ~~mLqC~~C~qWFH~~Cl~~~~~~~lp~-~~f-------Y~F~C~~C~~~g~E~f~R~~--~~w~~v 74 (177)
T 3rsn_A 18 EVELQCGICTKWFTADTFGIDTSSCLPF-MTN-------YSFHCNVCHHSGNTYFLRKQ--ANLKEM 74 (177)
T ss_dssp SCEEECTTTCCEEEGGGGTCCCTTCCTT-CCS-------EEEECTTTSTTSSCEEEECC--CCHHHH
T ss_pred ceeEeeccccceecHHHhcccccCcccc-cee-------EEEEccccCCCCcceeEecc--CCHHHH
Confidence 4999999999999999998543 221 111 012455554433 2355553 469887
No 136
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=52.53 E-value=8.8 Score=29.02 Aligned_cols=36 Identities=33% Similarity=0.385 Sum_probs=23.9
Q ss_pred cccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+.+++..|.||++.-.. +..+..-.|+-.||..|..
T Consensus 10 ~~~~~~~C~IC~~~~~~--~~~~~~~~C~H~fc~~Ci~ 45 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEE--GEDVRRLPCMHLFHQVCVD 45 (69)
T ss_dssp STTCCCSBTTTTBCCCS--SSCEEECTTSCEEEHHHHH
T ss_pred cCCCCCCCeeCCccccC--CCcEEEeCCCCHHHHHHHH
Confidence 34556789999875322 2223444699999999965
No 137
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=52.24 E-value=5.4 Score=43.99 Aligned_cols=93 Identities=20% Similarity=0.438 Sum_probs=0.0
Q ss_pred ccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCCCCCccccCCCCCCCCccccCCCcccccccc
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLGKRPECILCPNKGGAMKCARSGNKWAHVSCA 418 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~~~~~C~LCp~~gGalK~t~~g~~WvHv~CA 418 (525)
..|++|.+.=-.-..+=+.|..|+..||..| ...++. .|+...-..+.....
T Consensus 49 ~~C~~C~~~i~g~~~qg~~C~~C~~~~H~~C--~~~v~~-----------------~c~~~~~~~~~~~~~--------- 100 (674)
T 3pfq_A 49 TFCSHCTDFIWGFGKQGFQCQVCSFVVHKRC--HEFVTF-----------------SCPGADKGPASDDPR--------- 100 (674)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccccccccccccCCceeECCCCCCCcChhh--cCcCcc-----------------cCCCccccccccccc---------
Q ss_pred cCCCccEEccCcccccccCCCCcccccccccccccCCCCC----ceeecCCCCCCceeeccch
Q psy5645 419 LWIPEVSIGCVEKMEPITKISSIPQSRWALICILCRERLG----ACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 419 lwipev~f~~~~~~epI~~i~~I~~~r~~l~C~iC~~~~G----acIqCs~~~C~~aFHvtCA 477 (525)
..-.|.-.....+. .|..|+.... .-.+|. .|...+|..|+
T Consensus 101 ---~~h~~~~~~~~~~~-------------~C~~C~~~l~g~~~qg~~C~--~C~~~~H~~C~ 145 (674)
T 3pfq_A 101 ---SKHKFKIHTYSSPT-------------FCDHCGSLLYGLIHQGMKCD--TCMMNVHKRCV 145 (674)
T ss_dssp ----CCCCCEECCSSCC-------------CCSSSCSCCBBSSSCEECCS--SSCCCBCSSTT
T ss_pred ---CCcceeecCCCCCC-------------CCCccccccchhhcCccccc--cCCcchhhhhh
No 138
>3ky9_A Proto-oncogene VAV; calponin homology domain, DBL homology domain, pleckst homology domain, C1 domain, guanine-nucleotide releasing FA metal-binding; 2.73A {Homo sapiens} PDB: 2d86_A
Probab=52.19 E-value=15 Score=39.71 Aligned_cols=38 Identities=24% Similarity=0.524 Sum_probs=29.9
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
+..-..|.+|.+.--.-...-..|..|+..||..|.+.
T Consensus 526 ~~~~t~C~~C~~~l~gl~~qg~~C~~C~~~vHk~C~~~ 563 (587)
T 3ky9_A 526 FEETTSCKACQMLLRGTFYQGYRCHRCRASAHKECLGR 563 (587)
T ss_dssp CSSCCBCTTTCSBCCSSSCCEEEETTTCCEECSGGGGG
T ss_pred CCCCcccccccccccccccCCcCCCCCCCccchhhhhc
Confidence 44568899998853333457799999999999999875
No 139
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.58 E-value=2.5 Score=33.68 Aligned_cols=37 Identities=22% Similarity=0.481 Sum_probs=26.9
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
..-..|++|.+.=-.-..+-+.|..|++.+|..|...
T Consensus 26 ~~pt~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 62 (74)
T 2db6_A 26 KKPKFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQSY 62 (74)
T ss_dssp SSCEECSSSCCEECHHHHEEEEESSSCCEECTTTTGG
T ss_pred CCCcCchhcChhhccccCCccccCCCCCccChhHHhh
Confidence 3457899998642111136689999999999999763
No 140
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=51.17 E-value=7.9 Score=40.16 Aligned_cols=36 Identities=28% Similarity=0.726 Sum_probs=28.1
Q ss_pred cCcccccccCCCCCCCCC-cEEEcc--CCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGN-EMVFCD--CCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N-~lv~CD--~C~i~VHq~CYg 371 (525)
+....|.||.+.-.+++. .-..|+ .|+..||..|..
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~ 344 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLE 344 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGH
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHH
Confidence 456789999998665333 456899 799999999975
No 141
>4b6d_A RAC GTPase-activating protein 1; signaling protein, cytokinesis, plasma membrane, phospholipi centralspindlin, spindle midzone, central spindle; 2.20A {Homo sapiens}
Probab=50.49 E-value=9.5 Score=29.41 Aligned_cols=34 Identities=21% Similarity=0.415 Sum_probs=26.5
Q ss_pred cccccccCCCCCCCCCcEEEccCCCceeccccccc
Q psy5645 338 NVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 338 d~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
-..|++|.+.- .=+...+.|..|++.+|..|-..
T Consensus 19 ~~~C~~Cg~~i-~~gkq~~kC~dC~~~cH~~C~~~ 52 (61)
T 4b6d_A 19 PESCVPCGKRI-KFGKLSLKCRDCRVVSHPECRDR 52 (61)
T ss_dssp CEECTTTCCEE-CTTCEEEEESSSSCEECGGGGGG
T ss_pred CcccccccCEE-EEeeEeeECCCCCCeEchhHhhc
Confidence 36899996532 23458899999999999999764
No 142
>1r79_A Diacylglycerol kinase, delta; C1 domain, cystein-rich zinc binding domain, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: g.49.1.1
Probab=48.83 E-value=8.2 Score=31.83 Aligned_cols=35 Identities=26% Similarity=0.409 Sum_probs=26.2
Q ss_pred cccccccCCCC-CCCCCcEEEccCCCceeccccccc
Q psy5645 338 NVICDVCRSPD-SEEGNEMVFCDCCNICVHQACYGI 372 (525)
Q Consensus 338 d~~C~VC~~~e-~ed~N~lv~CD~C~i~VHq~CYgi 372 (525)
...|.||...= +...-.-..|--|++.||..|+..
T Consensus 38 ~s~C~vC~k~c~s~~~L~g~rC~WCq~~VH~~C~~~ 73 (84)
T 1r79_A 38 SAKCTVCDKTCGSVLRLQDWRCLWCKAMVHTSCKES 73 (84)
T ss_dssp TCBCSSSCCBCCCTTTCCCEEESSSCCEECHHHHHH
T ss_pred CCEeCCCCCEeCCccCCCCCCCcccChhHHHHHHHh
Confidence 46999998752 222236678999999999999863
No 143
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.71 E-value=8 Score=30.76 Aligned_cols=35 Identities=26% Similarity=0.567 Sum_probs=24.4
Q ss_pred CcccccccCCCCCC----------CCCcEEEccCCCceecccccc
Q psy5645 337 ENVICDVCRSPDSE----------EGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 337 ed~~C~VC~~~e~e----------d~N~lv~CD~C~i~VHq~CYg 371 (525)
++..|.||++.-.+ .++..+.--.|+-.||..|..
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~ 58 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMS 58 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHH
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHH
Confidence 34679999987543 233345555799999999965
No 144
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=47.67 E-value=9 Score=35.91 Aligned_cols=26 Identities=12% Similarity=0.065 Sum_probs=18.9
Q ss_pred ccCCC---CCceeecCCCCCCceeeccchhc
Q psy5645 452 LCRER---LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 452 iC~~~---~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
+|+.. .-.++||+ .|.++||..|...
T Consensus 9 YCG~~~~~~~~mLqC~--~C~qWFH~~Cl~~ 37 (177)
T 3rsn_A 9 DEENGRQLGEVELQCG--ICTKWFTADTFGI 37 (177)
T ss_dssp --CTTCCTTSCEEECT--TTCCEEEGGGGTC
T ss_pred EcCCCCCCCceeEeec--cccceecHHHhcc
Confidence 57653 23489999 7999999999863
No 145
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=45.46 E-value=16 Score=28.40 Aligned_cols=51 Identities=20% Similarity=0.555 Sum_probs=34.9
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCC--CccceeecC
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSG--SWLCRTCVL 387 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg--~WlC~~C~~ 387 (525)
++...|.||+...--| +-=-.|.-|.+.+-..|-|-..+... -|.|..|..
T Consensus 7 ~d~~~C~iC~KTKFAD-G~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 7 GDAPTCGICHKTKFAD-GCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp SCCCCCSSSSCSCCCS-SCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHH
T ss_pred CCcchhhhhccceecc-CCCccccccCCeeecccCCEeeecCCeEEEEehhhhh
Confidence 5568999999876444 33346777788887778664444443 499998864
No 146
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=45.36 E-value=14 Score=26.31 Aligned_cols=34 Identities=18% Similarity=0.424 Sum_probs=24.4
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
++..|.||++.-. +++..+..-.|+-.||..|..
T Consensus 4 ~~~~C~IC~~~~~-~~~~~~~~~~CgH~fc~~Ci~ 37 (55)
T 2ecm_A 4 GSSGCPICLEDIH-TSRVVAHVLPCGHLLHRTCYE 37 (55)
T ss_dssp CCCSCTTTCCCCC-TTTSCEEECTTSCEEETTHHH
T ss_pred CCCcCcccChhhc-CCCcCeEecCCCCcccHHHHH
Confidence 3468999998643 223455666799999999975
No 147
>1rfh_A RAS association (ralgds/AF-6) domain family 5; zinc, signal transduction, apoptosis, cysteine rich domain, metal binding protein; NMR {Mus musculus}
Probab=45.34 E-value=5.5 Score=30.32 Aligned_cols=33 Identities=21% Similarity=0.528 Sum_probs=26.6
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
..-..|+.|.+.= ...-+.|..|+..+|..|..
T Consensus 20 ~~pt~C~~C~~~i---~kqg~kC~~C~~~cH~kC~~ 52 (59)
T 1rfh_A 20 GGPGWCDLCGREV---LRQALRCANCKFTCHSECRS 52 (59)
T ss_dssp SCCEECTTTCSEE---CSCCEECTTTSCEECHHHHT
T ss_pred CCCeEchhcchhh---hhCccEeCCCCCeEehhhhh
Confidence 3346899998753 45778999999999999975
No 148
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=45.28 E-value=7.5 Score=31.13 Aligned_cols=52 Identities=19% Similarity=0.461 Sum_probs=30.1
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
..++..|.||.+.-..++-.++-| .||-.|++.|+.-. ..++...|..|+..
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~-~~~~~~~CP~CR~~ 59 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRI-RTDENGLCPACRKP 59 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHH-TTSSCSBCTTTCCB
T ss_pred cccCCcCCccCccCcccccccccc-CCCCCcCHHHHHHH-HhcCCCCCCCCCCc
Confidence 345678999999643222223334 58877777776522 12345566666653
No 149
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=44.88 E-value=7 Score=40.85 Aligned_cols=46 Identities=22% Similarity=0.696 Sum_probs=35.5
Q ss_pred cccccccCCCCCCCCCcEEEcc--CCCceeccccccccc--------cCCCCccceeecCC
Q psy5645 338 NVICDVCRSPDSEEGNEMVFCD--CCNICVHQACYGITT--------IPSGSWLCRTCVLG 388 (525)
Q Consensus 338 d~~C~VC~~~e~ed~N~lv~CD--~C~i~VHq~CYgi~~--------iPeg~WlC~~C~~~ 388 (525)
+..|.+|.++ ++++.|| .|..+|-..|..... ..+..|.|=.|.-.
T Consensus 93 ~~yCr~C~~G-----g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 93 QSYCSICCSG-----ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp BCSCTTTCCC-----SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred cccceEcCCC-----CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 3589999975 6899999 999999999986432 23467888777653
No 150
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=38.74 E-value=28 Score=26.76 Aligned_cols=35 Identities=20% Similarity=0.391 Sum_probs=22.8
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.+++..|.||++.-... ..++ --.|+-.||..|..
T Consensus 12 ~~~~~~C~IC~~~~~~~-~~~~-~~~C~H~fc~~Ci~ 46 (78)
T 2ect_A 12 VGSGLECPVCKEDYALG-ESVR-QLPCNHLFHDSCIV 46 (78)
T ss_dssp SSSSCCCTTTTSCCCTT-SCEE-ECTTSCEEETTTTH
T ss_pred CCCCCCCeeCCccccCC-CCEE-EeCCCCeecHHHHH
Confidence 34567899999864322 2222 23589899999965
No 151
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.33 E-value=20 Score=27.30 Aligned_cols=36 Identities=25% Similarity=0.594 Sum_probs=24.3
Q ss_pred cccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 334 EFDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 334 e~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+.+++..|.||++.-. +...+... .|+-.||..|..
T Consensus 11 ~~~~~~~C~IC~~~~~-~~~~~~~~-~C~H~f~~~Ci~ 46 (74)
T 2ep4_A 11 ELNLHELCAVCLEDFK-PRDELGIC-PCKHAFHRKCLI 46 (74)
T ss_dssp CCCCSCBCSSSCCBCC-SSSCEEEE-TTTEEEEHHHHH
T ss_pred cCCCCCCCcCCCcccC-CCCcEEEc-CCCCEecHHHHH
Confidence 3456679999998743 22333333 599999999965
No 152
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=38.27 E-value=13 Score=36.18 Aligned_cols=30 Identities=33% Similarity=0.697 Sum_probs=25.2
Q ss_pred ccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 448 LICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..|.+|+.-....+.|. +|...||..|..+
T Consensus 181 ~~C~iC~~iv~~g~~C~--~C~~~~H~~C~~~ 210 (238)
T 3nw0_A 181 KICNICHSLLIQGQSCE--TCGIRMHLPCVAK 210 (238)
T ss_dssp CBCTTTCSBCSSCEECS--SSCCEECHHHHHH
T ss_pred CcCcchhhHHhCCcccC--ccChHHHHHHHHH
Confidence 47999998765668998 4999999999965
No 153
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.70 E-value=27 Score=26.37 Aligned_cols=49 Identities=20% Similarity=0.436 Sum_probs=30.0
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccccccc-CCCCccceeecCC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTI-PSGSWLCRTCVLG 388 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~i-Peg~WlC~~C~~~ 388 (525)
.+++..|.||++.-. +.++. .|+-.||..|...-.. ..+.-.|..|...
T Consensus 17 ~~~~~~C~IC~~~~~---~~~~~--~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~ 66 (73)
T 2ysl_A 17 LQEEVICPICLDILQ---KPVTI--DCGHNFCLKCITQIGETSCGFFKCPLCKTS 66 (73)
T ss_dssp CCCCCBCTTTCSBCS---SEEEC--TTCCEEEHHHHHHHCSSSCSCCCCSSSCCC
T ss_pred CccCCEeccCCcccC---CeEEc--CCCChhhHHHHHHHHHcCCCCCCCCCCCCc
Confidence 455678999998532 34443 8998888888753211 1234456666543
No 154
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.07 E-value=14 Score=28.36 Aligned_cols=34 Identities=24% Similarity=0.463 Sum_probs=23.9
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+++..|.||++.-. + ...+..-.|+-.||..|..
T Consensus 21 ~~~~~C~IC~~~~~-~-~~~~~~l~C~H~fh~~Ci~ 54 (75)
T 1x4j_A 21 SEQTLCVVCMCDFE-S-RQLLRVLPCNHEFHAKCVD 54 (75)
T ss_dssp SSCCEETTTTEECC-B-TCEEEEETTTEEEETTHHH
T ss_pred CCCCCCeECCcccC-C-CCeEEEECCCCHhHHHHHH
Confidence 45678999997532 2 2344445699999999975
No 155
>2row_A RHO-associated protein kinase 2; ATP-binding, coiled coil, cytoplasm, membrane, metal-binding, nucleotide-binding, phorbol-ester binding; NMR {Rattus norvegicus}
Probab=35.52 E-value=12 Score=30.75 Aligned_cols=37 Identities=19% Similarity=0.378 Sum_probs=27.9
Q ss_pred ccCcccccccCCCCCCCCCc--EEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNE--MVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~--lv~CD~C~i~VHq~CYg 371 (525)
+..-+.|+.|.+.=-.-..+ -+.|..|++.+|..|..
T Consensus 32 ~~~PT~Cd~C~~~lWGl~kqp~G~~C~~C~~~~HkrC~~ 70 (84)
T 2row_A 32 YHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKDHMD 70 (84)
T ss_dssp CSSCEECSSSSSEECCSSSCCCEEEESSSCCEEEHHHHH
T ss_pred CCCCcchhhcCHhhhccccCCCCCEecCCCCccchhHhC
Confidence 44557899998753222234 78999999999999987
No 156
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=35.39 E-value=16 Score=30.15 Aligned_cols=31 Identities=26% Similarity=0.608 Sum_probs=25.3
Q ss_pred cccccccCCC-CCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRER-LGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~-~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
...|.+|+.. .|-.-.|. .|...+|+.||..
T Consensus 47 ~~~C~~C~~~~~~~~Y~C~--~C~f~lH~~Ca~~ 78 (89)
T 1v5n_A 47 VYTCDKCEEEGTIWSYHCD--ECDFDLHAKCALN 78 (89)
T ss_dssp SCCCTTTSCCCCSCEEECT--TTCCCCCHHHHHC
T ss_pred CeEeCCCCCcCCCcEEEcC--CCCCeEcHHhcCC
Confidence 3579999986 35567998 7999999999964
No 157
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=34.26 E-value=22 Score=26.29 Aligned_cols=29 Identities=28% Similarity=0.681 Sum_probs=23.6
Q ss_pred ccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
..|++|+..= .. . +.|..|+..+|+.|..
T Consensus 15 t~C~~C~k~i-~~--G-~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSM-IF--G-VKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSS-CC--E-EEETTTTEEESSSCTT
T ss_pred cCccccCcee-EC--c-CCCCCCCCccchhhcC
Confidence 6899998763 22 2 7899999999999965
No 158
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=33.04 E-value=38 Score=25.98 Aligned_cols=49 Identities=18% Similarity=0.567 Sum_probs=28.2
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVL 387 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~ 387 (525)
..++..|.||++.-. +.+ .-..|+-.||..|...-....+...|..|..
T Consensus 12 ~~~~~~C~IC~~~~~---~p~-~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~ 60 (74)
T 2yur_A 12 IPDELLCLICKDIMT---DAV-VIPCCGNSYCDECIRTALLESDEHTCPTCHQ 60 (74)
T ss_dssp SCGGGSCSSSCCCCT---TCE-ECSSSCCEECTTHHHHHHHHSSSSCCSSSCC
T ss_pred CCCCCCCcCCChHHh---CCe-EcCCCCCHHHHHHHHHHHHhcCCCcCCCCCC
Confidence 445678999988632 233 3344888888888653211122345555554
No 159
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.76 E-value=18 Score=28.28 Aligned_cols=36 Identities=19% Similarity=0.420 Sum_probs=23.7
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
..+...|.||++.-.+.....+.- .|+-.||..|..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~-~CgH~fC~~Ci~ 47 (88)
T 2ct2_A 12 LREVLECPICMESFTEEQLRPKLL-HCGHTICRQCLE 47 (88)
T ss_dssp CCSCCBCTTTCCBCCTTSSCEEEC-SSSCEEEHHHHH
T ss_pred ccCCCCCccCCccccccCCCeEEC-CCCChhhHHHHH
Confidence 445678999998644332223333 688888888875
No 160
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.48 E-value=36 Score=25.04 Aligned_cols=26 Identities=31% Similarity=0.961 Sum_probs=20.9
Q ss_pred ccCCCCccceeecCCC---CCccccCCCC
Q psy5645 374 TIPSGSWLCRTCVLGK---RPECILCPNK 399 (525)
Q Consensus 374 ~iPeg~WlC~~C~~~~---~~~C~LCp~~ 399 (525)
+.++|.|-|..|.... ...|+-|...
T Consensus 6 k~~~gsW~C~~C~v~N~a~~~kC~aC~~p 34 (47)
T 2ebr_A 6 SGPEGSWDCELCLVQNKADSTKCLACESA 34 (47)
T ss_dssp SSCCSSCCCSSSCCCCCSSCSBCSSSCCB
T ss_pred cCCCCeeECCeeecCCcCCcceecCcCCC
Confidence 3578999999999863 5789999753
No 161
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=29.56 E-value=26 Score=28.74 Aligned_cols=30 Identities=20% Similarity=0.595 Sum_probs=24.2
Q ss_pred ccccccCCCCCCCCCcEEEccC--CCceecccccc
Q psy5645 339 VICDVCRSPDSEEGNEMVFCDC--CNICVHQACYG 371 (525)
Q Consensus 339 ~~C~VC~~~e~ed~N~lv~CD~--C~i~VHq~CYg 371 (525)
..|.+|... ..+.-|.|.. |..+||-.|.-
T Consensus 18 l~C~iC~~~---~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 18 LTCYLCKQK---GVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCBTTTTBC---CSSCEEECSCTTTCCEEEHHHHH
T ss_pred CCCcCCCCC---CCcEeEecCCCCCCCcCcHHHHH
Confidence 589999863 1268899985 99999999964
No 162
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.99 E-value=19 Score=26.64 Aligned_cols=32 Identities=22% Similarity=0.482 Sum_probs=22.6
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.+++..|.||++.-. +.++. .|+-.||..|..
T Consensus 17 ~~~~~~C~IC~~~~~---~p~~~--~CgH~fC~~Ci~ 48 (63)
T 2ysj_A 17 LQEEVICPICLDILQ---KPVTI--DCGHNFCLKCIT 48 (63)
T ss_dssp CCCCCBCTTTCSBCS---SCEEC--TTSSEECHHHHH
T ss_pred CccCCCCCcCCchhC---CeEEe--CCCCcchHHHHH
Confidence 456678999998632 34443 788888888865
No 163
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=28.88 E-value=11 Score=31.99 Aligned_cols=17 Identities=29% Similarity=0.806 Sum_probs=14.9
Q ss_pred ceeecCCCCCCceeeccch
Q psy5645 459 ACIQCSVKTCKTAYHVTCA 477 (525)
Q Consensus 459 acIqCs~~~C~~aFHvtCA 477 (525)
.+|+|. .|..+||..|-
T Consensus 1 ~mi~c~--~c~~w~H~~c~ 17 (140)
T 2ku7_A 1 SMMQCG--KCDRWVHSKCE 17 (140)
T ss_dssp CCCCCS--CCSSCHHHHHC
T ss_pred Cccccc--cCCCccCCccc
Confidence 378999 79999999995
No 164
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=28.39 E-value=31 Score=31.69 Aligned_cols=32 Identities=19% Similarity=0.498 Sum_probs=28.1
Q ss_pred cccccccCCCCCceeecCCCCCCceeeccchhc
Q psy5645 447 ALICILCRERLGACIQCSVKTCKTAYHVTCAFK 479 (525)
Q Consensus 447 ~l~C~iC~~~~GacIqCs~~~C~~aFHvtCA~~ 479 (525)
..+|.+|+. +|..|-|++.+|.+.|=+.|...
T Consensus 79 ~~yC~wC~~-Gg~l~~Cdn~~C~r~FC~~CI~~ 110 (159)
T 3a1b_A 79 QSYCTICCG-GREVLMCGNNNCCRCFCVECVDL 110 (159)
T ss_dssp BSSCTTTSC-CSEEEECSSTTTCCEEEHHHHHH
T ss_pred cceeeEecC-CCeEEeeCCCCCCCchhHHHHHH
Confidence 458999997 48999999999999999999854
No 165
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=27.29 E-value=12 Score=31.84 Aligned_cols=31 Identities=19% Similarity=0.443 Sum_probs=21.1
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.++..|.||++.-. +.+.. .|+-.||..|..
T Consensus 50 ~~~~~C~IC~~~~~---~p~~~--~CgH~fC~~Ci~ 80 (124)
T 3fl2_A 50 EETFQCICCQELVF---RPITT--VCQHNVCKDCLD 80 (124)
T ss_dssp HHHTBCTTTSSBCS---SEEEC--TTSCEEEHHHHH
T ss_pred ccCCCCCcCChHHc---CcEEe--eCCCcccHHHHH
Confidence 45578999998632 34333 788888888764
No 166
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.90 E-value=44 Score=25.28 Aligned_cols=47 Identities=13% Similarity=0.148 Sum_probs=27.4
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
..++..|.||++.- .+.++. .|+-.||..|...-. .....|..|+..
T Consensus 12 ~~~~~~C~IC~~~~---~~~~~~--~CgH~fC~~Ci~~~~--~~~~~CP~Cr~~ 58 (71)
T 2d8t_A 12 SLTVPECAICLQTC---VHPVSL--PCKHVFCYLCVKGAS--WLGKRCALCRQE 58 (71)
T ss_dssp SSSCCBCSSSSSBC---SSEEEE--TTTEEEEHHHHHHCT--TCSSBCSSSCCB
T ss_pred CCCCCCCccCCccc---CCCEEc--cCCCHHHHHHHHHHH--HCCCcCcCcCch
Confidence 34557899999763 233333 588888888864211 112355555543
No 167
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=26.45 E-value=11 Score=28.35 Aligned_cols=38 Identities=18% Similarity=0.431 Sum_probs=26.3
Q ss_pred cccCcccccccCCCCCC--CCCcEEEccCCCceecccccc
Q psy5645 334 EFDENVICDVCRSPDSE--EGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 334 e~ded~~C~VC~~~e~e--d~N~lv~CD~C~i~VHq~CYg 371 (525)
..+++..|.||++.-.+ .+...+..-.|+-.||..|..
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~ 45 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLR 45 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHH
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHH
Confidence 34556789999976322 123555667899999999975
No 168
>3gj5_B Nuclear pore complex protein NUP153; G protein, GDP, RAN, zinc finger, acetylation, cytoplasm, GTP-binding, HOST-virus interaction; HET: GDP; 1.79A {Rattus norvegicus} SCOP: g.41.11.1
Probab=26.38 E-value=17 Score=25.00 Aligned_cols=23 Identities=39% Similarity=1.063 Sum_probs=17.2
Q ss_pred CCCCccceeecCC---CCCccccCCC
Q psy5645 376 PSGSWLCRTCVLG---KRPECILCPN 398 (525)
Q Consensus 376 Peg~WlC~~C~~~---~~~~C~LCp~ 398 (525)
.+|+|-|..|... ...+|+-|..
T Consensus 4 ~~G~W~C~~C~v~N~~~~~kC~aCet 29 (34)
T 3gj5_B 4 GSGSWDCEVCLVQNKADSTKCIACES 29 (34)
T ss_dssp --CCEECTTTCCEECSSCSBCTTTCC
T ss_pred CCCceECCeeEeECccccCEEcccCC
Confidence 5799999999985 3568888864
No 169
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=26.23 E-value=34 Score=23.07 Aligned_cols=24 Identities=33% Similarity=0.962 Sum_probs=18.2
Q ss_pred CCCCccceeecCC---CCCccccCCCC
Q psy5645 376 PSGSWLCRTCVLG---KRPECILCPNK 399 (525)
Q Consensus 376 Peg~WlC~~C~~~---~~~~C~LCp~~ 399 (525)
..|+|.|..|... ....|.-|...
T Consensus 3 ~~gDW~C~~C~~~Nfa~R~~C~~C~~p 29 (33)
T 2k1p_A 3 SANDWQCKTCSNVNWARRSECNMCNTP 29 (33)
T ss_dssp SSSSCBCSSSCCBCCTTCSBCSSSCCB
T ss_pred CCCCcccCCCCCccccccccccccCCc
Confidence 4689999999864 46678888653
No 170
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=26.02 E-value=21 Score=31.89 Aligned_cols=31 Identities=16% Similarity=0.427 Sum_probs=20.4
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.++..|.||++.-. +..+ -.|+-.|+..|..
T Consensus 76 ~~~~~C~IC~~~~~---~pv~--~~CgH~fC~~Ci~ 106 (150)
T 1z6u_A 76 EQSFMCVCCQELVY---QPVT--TECFHNVCKDCLQ 106 (150)
T ss_dssp HHHTBCTTTSSBCS---SEEE--CTTSCEEEHHHHH
T ss_pred ccCCEeecCChhhc---CCEE--cCCCCchhHHHHH
Confidence 34578999998532 3333 3788777777754
No 171
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=24.90 E-value=31 Score=25.44 Aligned_cols=29 Identities=24% Similarity=0.868 Sum_probs=23.5
Q ss_pred ccccccCCC--CCceeecCCCCCCceeeccchhcc
Q psy5645 448 LICILCRER--LGACIQCSVKTCKTAYHVTCAFKH 480 (525)
Q Consensus 448 l~C~iC~~~--~GacIqCs~~~C~~aFHvtCA~~a 480 (525)
..|..|++. .| ++|. .|...+|..|+...
T Consensus 15 t~C~~C~k~i~~G--~kC~--~Ck~~cH~kC~~~v 45 (49)
T 1kbe_A 15 QVCNVCQKSMIFG--VKCK--HCRLKCHNKCTKEA 45 (49)
T ss_dssp CCCSSSCCSSCCE--EEET--TTTEEESSSCTTTS
T ss_pred cCccccCceeECc--CCCC--CCCCccchhhcCcC
Confidence 469999875 34 7997 89999999998643
No 172
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=24.56 E-value=23 Score=34.33 Aligned_cols=38 Identities=13% Similarity=0.267 Sum_probs=28.3
Q ss_pred cCCcccccCcccccccCCCCC-------CCCCcEEEccCCCceec
Q psy5645 329 EGLGLEFDENVICDVCRSPDS-------EEGNEMVFCDCCNICVH 366 (525)
Q Consensus 329 ~~~~~e~ded~~C~VC~~~e~-------ed~N~lv~CD~C~i~VH 366 (525)
.|.++..-....|..|+..=+ -.++.+++|..||+-.-
T Consensus 189 ~g~avv~v~~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~CgRIL~ 233 (256)
T 3na7_A 189 KNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCGRILY 233 (256)
T ss_dssp GGGSEEECBTTBCTTTCCBCCHHHHHHHHHSSSCEECTTTCCEEE
T ss_pred CCceEEEeeCCccCCCCeeeCHHHHHHHHCCCCEEECCCCCeeEE
Confidence 567777777789999997422 12468999999998663
No 173
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=24.45 E-value=21 Score=23.96 Aligned_cols=22 Identities=41% Similarity=1.053 Sum_probs=17.1
Q ss_pred CCCccceeecCC---CCCccccCCC
Q psy5645 377 SGSWLCRTCVLG---KRPECILCPN 398 (525)
Q Consensus 377 eg~WlC~~C~~~---~~~~C~LCp~ 398 (525)
.|+|.|..|... ....|.-|..
T Consensus 3 ~gDW~C~~C~~~Nfa~r~~C~~C~~ 27 (32)
T 2lk0_A 3 FEDWLCNKCCLNNFRKRLKCFRCGA 27 (32)
T ss_dssp CSEEECTTTCCEEETTCCBCTTTCC
T ss_pred CCCCCcCcCcCCcChhcceecCCCC
Confidence 489999999874 5667888865
No 174
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.06 E-value=19 Score=26.75 Aligned_cols=37 Identities=19% Similarity=0.439 Sum_probs=25.7
Q ss_pred ccCcccccccCCCCCC--CCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSE--EGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~e--d~N~lv~CD~C~i~VHq~CYg 371 (525)
.+++..|.||++.-.+ .....+.--.|+-.||..|..
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~ 50 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLR 50 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHH
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhcHHHHH
Confidence 4556789999986322 123455566899999999975
No 175
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.66 E-value=27 Score=26.25 Aligned_cols=46 Identities=17% Similarity=0.374 Sum_probs=28.6
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceeccccccccccCCCCccceeecCC
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYGITTIPSGSWLCRTCVLG 388 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYgi~~iPeg~WlC~~C~~~ 388 (525)
..++..|.||++...+ .--.|+-.||..|...- -.....|..|+..
T Consensus 12 ~~~~~~C~IC~~~~~~------~~~~CgH~fc~~Ci~~~--~~~~~~CP~Cr~~ 57 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD------LILPCAHSFCQKCIDKW--SDRHRNCPICRLQ 57 (70)
T ss_dssp CCCCCCCSSSCCSCCS------EEETTTEEECHHHHHHS--SCCCSSCHHHHHC
T ss_pred CCCCCCCeeCCcCccC------cccCCCCcccHHHHHHH--HHCcCcCCCcCCc
Confidence 3456789999986432 22368888888886531 1234566666553
No 176
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.60 E-value=38 Score=25.39 Aligned_cols=27 Identities=26% Similarity=0.806 Sum_probs=21.3
Q ss_pred cCCCCccceeecCC---CCCccccCCCCCC
Q psy5645 375 IPSGSWLCRTCVLG---KRPECILCPNKGG 401 (525)
Q Consensus 375 iPeg~WlC~~C~~~---~~~~C~LCp~~gG 401 (525)
.+++.|-|..|.+. ....|..|....+
T Consensus 7 ~~~~~W~C~~CT~~N~~~~~~C~~C~~pr~ 36 (53)
T 2d9g_A 7 GDEGYWDCSVCTFRNSAEAFKCMMCDVRKG 36 (53)
T ss_dssp SCCCCEECSSSCCEECSSCSSCSSSCCCCC
T ss_pred CCCCCcCCCCCccCCCCCCCccCCCCCcCC
Confidence 46789999999996 4578999986543
No 177
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=22.16 E-value=37 Score=35.66 Aligned_cols=35 Identities=23% Similarity=0.375 Sum_probs=26.5
Q ss_pred CcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 337 ENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 337 ed~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.-..|+.|.+.--.-...-+.|..|++.+|..|..
T Consensus 219 ~pt~C~~C~~~l~g~~~qg~~C~~C~~~~Hk~C~~ 253 (463)
T 3cxl_A 219 GPHWCEYCANFMWGLIAQGVKCADCGLNVHKQCSK 253 (463)
T ss_dssp SCCBCTTTCCBCCSSSCCEEEETTTCCEECHHHHT
T ss_pred CCCcchhhhhhhhhHHhcCeeccccCccccccccc
Confidence 34689999875322224678999999999999964
No 178
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=22.05 E-value=37 Score=27.30 Aligned_cols=34 Identities=21% Similarity=0.485 Sum_probs=22.8
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
+++..|.||++.-. +++..+. -.|+-.||..|..
T Consensus 38 ~~~~~C~IC~~~~~-~~~~~~~-l~C~H~Fh~~Ci~ 71 (91)
T 2l0b_A 38 GQEMCCPICCSEYV-KGDVATE-LPCHHYFHKPCVS 71 (91)
T ss_dssp SSCSEETTTTEECC-TTCEEEE-ETTTEEEEHHHHH
T ss_pred CCCCCCcccChhhc-CCCcEEe-cCCCChHHHHHHH
Confidence 45578999997532 2233333 3499999999965
No 179
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=21.56 E-value=41 Score=28.36 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=22.2
Q ss_pred CcccccccCCCCCCC-------------CCcEEEccCCCceecccccc
Q psy5645 337 ENVICDVCRSPDSEE-------------GNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 337 ed~~C~VC~~~e~ed-------------~N~lv~CD~C~i~VHq~CYg 371 (525)
+++.|.||++.-.+. ++..+.--.|+-.||..|..
T Consensus 36 ~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~ 83 (106)
T 3dpl_R 36 VVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCIS 83 (106)
T ss_dssp CSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHH
T ss_pred CCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHH
Confidence 346899998763221 11234445799999999954
No 180
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=21.32 E-value=36 Score=25.97 Aligned_cols=32 Identities=22% Similarity=0.540 Sum_probs=20.6
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.+++..|.||++.-. +.++. .|+-.||..|..
T Consensus 9 ~~~~~~C~IC~~~~~---~p~~l--~CgH~fC~~Ci~ 40 (79)
T 2egp_A 9 VQEEVTCPICLELLT---EPLSL--DCGHSLCRACIT 40 (79)
T ss_dssp CCCCCEETTTTEECS---SCCCC--SSSCCCCHHHHS
T ss_pred cccCCCCcCCCcccC---CeeEC--CCCCHHHHHHHH
Confidence 455678999998632 23222 577777777765
No 181
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=20.97 E-value=20 Score=31.04 Aligned_cols=31 Identities=32% Similarity=1.029 Sum_probs=0.0
Q ss_pred cccccCCC-CCceeecCCC--------------CCCceeeccchhc
Q psy5645 449 ICILCRER-LGACIQCSVK--------------TCKTAYHVTCAFK 479 (525)
Q Consensus 449 ~C~iC~~~-~GacIqCs~~--------------~C~~aFHvtCA~~ 479 (525)
.|.||... ...|+.|... .|.-.||..|...
T Consensus 50 ~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~ 95 (117)
T 4a0k_B 50 NCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR 95 (117)
T ss_dssp ----------------------------------------------
T ss_pred cCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHH
No 182
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=20.95 E-value=38 Score=28.19 Aligned_cols=31 Identities=16% Similarity=0.471 Sum_probs=21.2
Q ss_pred cCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 336 DENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 336 ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
.++..|.||++.-. +.++. .|+-.||..|..
T Consensus 13 ~~~~~C~iC~~~~~---~p~~~--~CgH~fC~~Ci~ 43 (115)
T 3l11_A 13 LSECQCGICMEILV---EPVTL--PCNHTLCKPCFQ 43 (115)
T ss_dssp HHHHBCTTTCSBCS---SCEEC--TTSCEECHHHHC
T ss_pred CCCCCCccCCcccC---ceeEc--CCCCHHhHHHHH
Confidence 44578999997632 34443 688888888764
No 183
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.14 E-value=25 Score=27.13 Aligned_cols=32 Identities=25% Similarity=0.536 Sum_probs=21.2
Q ss_pred ccCcccccccCCCCCCCCCcEEEccCCCceecccccc
Q psy5645 335 FDENVICDVCRSPDSEEGNEMVFCDCCNICVHQACYG 371 (525)
Q Consensus 335 ~ded~~C~VC~~~e~ed~N~lv~CD~C~i~VHq~CYg 371 (525)
..++..|.||++.-. +.++. .|+-.||..|..
T Consensus 16 ~~~~~~C~IC~~~~~---~p~~~--~CgH~fC~~Ci~ 47 (85)
T 2ecv_A 16 VKEEVTCPICLELLT---QPLSL--DCGHSFCQACLT 47 (85)
T ss_dssp CCCCCCCTTTCSCCS---SCBCC--SSSCCBCTTHHH
T ss_pred ccCCCCCCCCCcccC---CceeC--CCCCHHHHHHHH
Confidence 455678999998632 23322 688777777765
No 184
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=20.08 E-value=20 Score=30.35 Aligned_cols=32 Identities=31% Similarity=0.936 Sum_probs=21.8
Q ss_pred ccccccCCCC-CceeecCC--------------CCCCceeeccchhc
Q psy5645 448 LICILCRERL-GACIQCSV--------------KTCKTAYHVTCAFK 479 (525)
Q Consensus 448 l~C~iC~~~~-GacIqCs~--------------~~C~~aFHvtCA~~ 479 (525)
..|.||.... ..|+.|.. ..|.-.||..|...
T Consensus 38 d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~ 84 (106)
T 3dpl_R 38 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISR 84 (106)
T ss_dssp CCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHH
T ss_pred CCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHH
Confidence 4688888763 34444421 36889999999855
Done!