BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5646
(106 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9V3H8|NXT1_DROME NTF2-related export protein OS=Drosophila melanogaster GN=Nxt1 PE=2
SV=1
Length = 133
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+G+LY D +A LSWNG+G G Q I Y ELP +H+L ++D + ++A NQ+AYLI
Sbjct: 34 IGRLYLD-NATLSWNGNGAIGRQMIESYFQELPSSNHQLNTLDAQPIVDQAVSNQLAYLI 92
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRLQQ 100
SG+V + + + F Q FI++AE +WK++SD +R+Q+
Sbjct: 93 MASGSVKFADQQLRKFQQTFIVTAENDKWKVVSDCYRMQE 132
>sp|Q5ZLH0|NXT2_CHICK NTF2-related export protein 2 OS=Gallus gallus GN=NXT2 PE=2 SV=1
Length = 141
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY D+ A L WNG+ G +A+ ++ LP + ++ +D + E+A Q+Q L+
Sbjct: 36 LTRLYLDK-ATLIWNGNAVSGQEALNEFFEMLPSSEFQVNVLDCQPVHEQATQSQTTVLV 94
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGAR----WKIISDVFRLQ 99
T GTV + K+ FNQNF+++A+ WKI SD FR Q
Sbjct: 95 VTCGTVKFDGNKQRYFNQNFLLTAQATSNSTVWKIASDCFRFQ 137
>sp|Q9NPJ8|NXT2_HUMAN NTF2-related export protein 2 OS=Homo sapiens GN=NXT2 PE=2 SV=1
Length = 142
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY D+ A L WNG+ G A+ + LP + ++ +D + E+A Q+Q L+
Sbjct: 36 LTRLYLDK-ATLIWNGNAVSGLDALNNFFDTLPSSEFQVNMLDCQPVHEQATQSQTTVLV 94
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEG----ARWKIISDVFRLQ 99
TSGTV + K+ FNQNF+++A+ WKI SD FR Q
Sbjct: 95 VTSGTVKFDGNKQHFFNQNFLLTAQSTPNNTVWKIASDCFRFQ 137
>sp|A6QNX3|NXT2_BOVIN NTF2-related export protein 2 OS=Bos taurus GN=NXT2 PE=2 SV=1
Length = 142
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY D+ A L WNG+ G +A+ + LP + ++ +D + E+A Q+Q L+
Sbjct: 36 LTRLYLDK-ATLIWNGNVVTGLEALANFFDMLPSSEFQVNMLDCQPVHEQATQSQTTVLV 94
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGAR----WKIISDVFRLQ 99
TSGTV + K+ FNQNF+++A+ WKI SD FR Q
Sbjct: 95 VTSGTVKFDGNKQHYFNQNFLLTAQTTANNTVWKIASDCFRFQ 137
>sp|Q3UNA4|NXT2_MOUSE NTF2-related export protein 2 OS=Mus musculus GN=Nxt2 PE=2 SV=1
Length = 142
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY D+ A L WNG+ G +A+ + LP + ++ +D + E+A Q Q L+
Sbjct: 36 LVRLYLDK-ATLIWNGNVVTGLEALANFFEMLPSSEFQINMLDCQPVHEQATQCQTTVLV 94
Query: 61 STSGTVVYKNMKKTGFNQNFIISAE----GARWKIISDVFRLQ 99
TSG V + K+ FNQNF+++A+ WKI SD FR Q
Sbjct: 95 VTSGVVKFDGNKQHFFNQNFLLTAQSTPNSTVWKIASDCFRFQ 137
>sp|B2GV77|NXT2_RAT NTF2-related export protein 2 OS=Rattus norvegicus GN=Nxt2 PE=2
SV=1
Length = 142
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 3 KLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLIST 62
+LY D+ A L WNG+ G +A+ + LP + ++ +D + E+A Q Q L+ T
Sbjct: 38 RLYLDK-ATLIWNGNVVTGLEALANFFEMLPSSEFQINMLDCQPVHEQATQYQTTVLVVT 96
Query: 63 SGTVVYKNMKKTGFNQNFIISAE----GARWKIISDVFRLQ 99
SG V + K+ FNQNF+++A+ WKI SD FR Q
Sbjct: 97 SGVVKFDGNKQHFFNQNFLLTAQSTPNSTVWKIASDCFRFQ 137
>sp|Q2KIW0|NXT1_BOVIN NTF2-related export protein 1 OS=Bos taurus GN=NXT1 PE=2 SV=1
Length = 140
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY A L WNG+ G +++ ++ LP + ++ +D + +EA +Q L+
Sbjct: 35 LSRLYMGT-ATLVWNGNAVSGQESLSEFFEMLPSSEFQINVVDCQPVHDEATPSQTTVLV 93
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGAR----WKIISDVFRLQ 99
GTV ++ K+ FNQNFI++A+ + WKI SD FR Q
Sbjct: 94 VICGTVKFEGNKQRDFNQNFILTAQASPSNTVWKIASDCFRFQ 136
>sp|Q9QZV9|NXT1_MOUSE NTF2-related export protein 1 OS=Mus musculus GN=Nxt1 PE=1 SV=2
Length = 140
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY A L WNG+ G +++ ++ LP + ++ +D + ++A +Q L+
Sbjct: 35 LSRLYMGT-ATLVWNGNAVSGQESLSEFFEMLPSSEFQISVVDCQPVHDDATPSQTTVLV 93
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGAR----WKIISDVFRLQ 99
GTV ++ K+ FNQNFI++A+ + WKI SD FR Q
Sbjct: 94 VICGTVKFEGNKQRDFNQNFILTAQASPSNTVWKIASDCFRFQ 136
>sp|Q9UKK6|NXT1_HUMAN NTF2-related export protein 1 OS=Homo sapiens GN=NXT1 PE=1 SV=1
Length = 140
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 5/103 (4%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+ +LY A L WNG+ G +++ ++ LP + ++ +D + +EA +Q L+
Sbjct: 35 LSRLYMGT-ATLVWNGNAVSGQESLSEFFEMLPSSEFQISVVDCQPVHDEATPSQTTVLV 93
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGAR----WKIISDVFRLQ 99
G+V ++ K+ FNQNFI++A+ + WKI SD FR Q
Sbjct: 94 VICGSVKFEGNKQRDFNQNFILTAQASPSNTVWKIASDCFRFQ 136
>sp|Q9U757|NXT1_CAEEL NTF2-related export protein OS=Caenorhabditis elegans GN=nxt-1 PE=1
SV=1
Length = 137
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 14 WNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQI-AYLISTSGTVVYKNMK 72
WNG+ G +I +++ LP H+++S+D RLPE + L++ +G V
Sbjct: 50 WNGNPINGYDSICEFMKALPSTQHDIQSLDAQRLPEGVTGDMSGGMLLNVAGAVTVDGDS 109
Query: 73 KTGFNQNFIISAEGARWKIISDVFR 97
K F Q ++ E ++K+ SD FR
Sbjct: 110 KRAFTQTLLLGVEDGKYKVKSDRFR 134
>sp|Q6CC82|NTF2_YARLI Nuclear transport factor 2 OS=Yarrowia lipolytica (strain CLIB 122
/ E 150) GN=NTF2 PE=3 SV=1
Length = 123
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDIHRLPEEAAQNQIAYLI 60
+G LY+D ++L++ G +G+QAIV+ + LP K DI P A + L+
Sbjct: 27 LGNLYRDH-SMLTFTGTQHQGAQAIVEKLVGLPFGQVRHKISDIDAQPASAQGGDVIVLV 85
Query: 61 STSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
+G + + Q F + +G+ + + +D+FRL
Sbjct: 86 --TGELCVDGDNPLPYAQVFHLIPDGSSYYVFNDIFRL 121
>sp|Q86HW7|NTF2_DICDI Nuclear transport factor 2 OS=Dictyostelium discoideum GN=nutf2
PE=1 SV=1
Length = 127
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 8 EDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAYLISTSGT 65
+ L+W G G+ AIVK+I ELP + ++ S+D + + +I+ +GT
Sbjct: 36 QQTTLTWEGKFLSGADAIVKHIVELPFQQTNRKINSIDCQQTYQPGI------MITVTGT 89
Query: 66 VVYKNMKKT--GFNQNFIISAEGARWKIISDVFRL 98
++ K F Q F +++ + +I+D FRL
Sbjct: 90 LIIDGEAKNQLKFVQVFNLASNNGSFLLINDFFRL 124
>sp|Q6FRC6|NTF2_CANGA Nuclear transport factor 2 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=NTF2 PE=3
SV=1
Length = 125
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G LY+DE ++L++ +G+++IV+ + LP H + ++D + A+ N
Sbjct: 27 LGNLYRDE-SMLTFETSQLQGAKSIVEKLVSLPFQKVAHRITTLD----AQPASPNGDVL 81
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
++ T ++ F+Q F + +G + + +D+FRL
Sbjct: 82 VMITGDLLIDDEQNPQRFSQVFHLIPDGNSYYVFNDIFRL 121
>sp|Q75AA5|NTF2_ASHGO Nuclear transport factor 2 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=NTF2 PE=3 SV=1
Length = 125
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G LY+D+ ++L++ +G++ IV+ + LP H + ++D + A+ N
Sbjct: 27 LGNLYRDQ-SMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLD----AQPASPNGDVL 81
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
++ T ++ F+Q F + EG + + +D+FRL
Sbjct: 82 VMITGDLLIDDEQNAQRFSQVFHLMPEGNSYYVFNDIFRL 121
>sp|Q5R8G4|NTF2_PONAB Nuclear transport factor 2 OS=Pongo abelii GN=NUTF2 PE=2 SV=1
Length = 127
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G +Y D + L+W G +G AIV+ +S LP H + + D P+ + +
Sbjct: 29 LGAIYIDA-SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVV- 86
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
G + GF+Q F++ W +D+FRL
Sbjct: 87 -----GQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121
>sp|P61972|NTF2_RAT Nuclear transport factor 2 OS=Rattus norvegicus GN=Nutf2 PE=1 SV=1
Length = 127
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G +Y D + L+W G +G AIV+ +S LP H + + D P+ + +
Sbjct: 29 LGAIYIDA-SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVV- 86
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
G + GF+Q F++ W +D+FRL
Sbjct: 87 -----GQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121
>sp|P61971|NTF2_MOUSE Nuclear transport factor 2 OS=Mus musculus GN=Nutf2 PE=2 SV=1
Length = 127
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G +Y D + L+W G +G AIV+ +S LP H + + D P+ + +
Sbjct: 29 LGAIYIDA-SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVV- 86
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
G + GF+Q F++ W +D+FRL
Sbjct: 87 -----GQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121
>sp|P61970|NTF2_HUMAN Nuclear transport factor 2 OS=Homo sapiens GN=NUTF2 PE=1 SV=1
Length = 127
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G +Y D + L+W G +G AIV+ +S LP H + + D P+ + +
Sbjct: 29 LGAIYIDA-SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVV- 86
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
G + GF+Q F++ W +D+FRL
Sbjct: 87 -----GQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121
>sp|Q32KP9|NTF2_BOVIN Nuclear transport factor 2 OS=Bos taurus GN=NUTF2 PE=2 SV=1
Length = 127
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G +Y D + L+W G +G AIV+ +S LP H + + D P+ + +
Sbjct: 29 LGAIYIDA-SCLTWEGQQFQGKAAIVEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVV- 86
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
G + GF+Q F++ W +D+FRL
Sbjct: 87 -----GQLKADEDPIMGFHQMFLLKNINDAWVCTNDMFRL 121
>sp|Q6CQX4|NTF2_KLULA Nuclear transport factor 2 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=NTF2 PE=3 SV=1
Length = 125
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G LY+ E ++L++ +G++ IV+ + LP H + ++D + A+ N
Sbjct: 27 LGNLYR-EQSMLTFETTQLQGAKDIVEKLVSLPFQKVAHRITTLD----AQPASPNGDVL 81
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
++ T ++ + F+Q F + EG+ + + +D+FRL
Sbjct: 82 VMITGDLLIDEEQNPQRFSQVFHLMPEGSSYYVYNDIFRL 121
>sp|P33331|NTF2_YEAST Nuclear transport factor 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=NTF2 PE=1 SV=2
Length = 125
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+G LY++E ++L++ +G++ IV+ + LP H + ++D + A+ N
Sbjct: 27 LGNLYRNE-SMLTFETSQLQGAKDIVEKLVSLPFQKVQHRITTLD----AQPASPNGDVL 81
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
++ T ++ + F+Q F + +G + + +D+FRL
Sbjct: 82 VMITGDLLIDEEQNPQRFSQVFHLIPDGNSYYVFNDIFRL 121
>sp|P87102|NTF2_NEUCR Nuclear transport factor 2 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ntf-2 PE=2 SV=1
Length = 124
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+ LY+D +++L++ G + G+Q I + ++ LP HE D + A I
Sbjct: 27 LAGLYRD-NSMLTFEGAQSLGAQGITEKLTSLPFQKVKHEYGPPD----AQPTATGGIII 81
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGA-RWKIISDVFRL 98
L+ T +V + G++Q F +S + + +W + +D+F+L
Sbjct: 82 LV-TGQLIVDDEQRPLGYSQAFQLSQDASGQWFVFNDIFKL 121
>sp|O42242|NTF2_XENLA Nuclear transport factor 2 OS=Xenopus laevis GN=ntf2 PE=2 SV=1
Length = 127
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+ +Y D + L+W G G AIV+ +S LP H + S D P+ + +
Sbjct: 29 LAVIYTDA-SCLTWEGQQYHGKAAIVEKLSLLPFQKIQHSITSQDHQPTPDSCIISMVV- 86
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
G + + GF+Q F++ W +D+FRL
Sbjct: 87 -----GQLKADDDPIMGFHQVFLLKNIQDAWVCTNDMFRL 121
>sp|Q10100|NTF2_SCHPO Nuclear transport factor 2 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ntf2 PE=3 SV=2
Length = 123
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELP--PCDHELKSMDIHRLPEEAAQNQIAY 58
+ LY++E ++LS+ G +G++AIV+ + LP H + ++D P + I
Sbjct: 26 LSSLYREE-SMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQ--PTGTTGSVI-- 80
Query: 59 LISTSGTVVYKNMKKTGFNQNFIISAEGARWKIISDVFRL 98
++ T ++ + ++Q F + + +++D+FRL
Sbjct: 81 VMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFRL 120
>sp|Q8N9L9|ACOT4_HUMAN Acyl-coenzyme A thioesterase 4 OS=Homo sapiens GN=ACOT4 PE=1 SV=2
Length = 421
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 1 MGKLYKDEDAVLSWNGHGTKGSQAIVKYISELPPCDHELKSMDI 44
M K+ A +S NG G G+ AI S +PP ++L+ + +
Sbjct: 241 MASFLKNVSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKV 284
>sp|Q91DR9|L_SVCV RNA-directed RNA polymerase L OS=Spring viremia of carp virus GN=L
PE=3 SV=1
Length = 2095
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 36 DHELKSMDIHRLPEEAAQNQIAYLISTSGTVVYK 69
D E++ +DI R E+ ++ + L+S GTV+YK
Sbjct: 1747 DMEVQDIDISRRIEQNLRDHVHSLLSRHGTVIYK 1780
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,607,758
Number of Sequences: 539616
Number of extensions: 1308298
Number of successful extensions: 3352
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 3322
Number of HSP's gapped (non-prelim): 33
length of query: 106
length of database: 191,569,459
effective HSP length: 75
effective length of query: 31
effective length of database: 151,098,259
effective search space: 4684046029
effective search space used: 4684046029
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)