BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5647
(755 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328705070|ref|XP_001948023.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Acyrthosiphon pisum]
Length = 751
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/760 (71%), Positives = 632/760 (83%), Gaps = 20/760 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEM 60
RRSLAPSQ++KR DS + KR+C + E NSKL +
Sbjct: 2 RRSLAPSQVNKRPLSDS----------NQSKRACVKYNDQA---QKTEQNSKLDDKSITL 48
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
S +E IR IL+KPFKVPI N++G +S +ALGVRR+G R+ LHDPTAP+AL+LY PPQ+
Sbjct: 49 SLYEQNIRNILSKPFKVPIANWSGSSFS-RALGVRRDGIRRPLHDPTAPDALILYIPPQI 107
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
SAHD+LK+DKDKI V+VVVDP LS ILRPHQREGVKFMYECVTGVRIE AYGCIMADEMG
Sbjct: 108 SAHDILKMDKDKILVNVVVDPALSKILRPHQREGVKFMYECVTGVRIEGAYGCIMADEMG 167
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQCITLMWTLL+QGP A P I KAIIV PSSLVKNWCNEI KWLGGR+ ALP+DGG
Sbjct: 168 LGKTLQCITLMWTLLKQGPDASPTIHKAIIVTPSSLVKNWCNEIKKWLGGRIGALPVDGG 227
Query: 241 SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCE 299
K ++D + F+Q GRR V+PILVISYETFRSHAS+L E +GLVLCDEGHRLKNCE
Sbjct: 228 GKEQVDKVITGFVQARGRRTVDPILVISYETFRSHASLLQNAEDIGLVLCDEGHRLKNCE 287
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+QTY++LM LKAKRRVLLSGTPIQNDLLEYFSLVHFVN+GILGTAQEFR+QYETPI+RGQ
Sbjct: 288 NQTYRSLMALKAKRRVLLSGTPIQNDLLEYFSLVHFVNEGILGTAQEFRRQYETPIVRGQ 347
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
DSCA+D+ER KA ERLEQLI +VNRCLIRRTSALLSKYLPVKTE VVCIK+T LQ +LY
Sbjct: 348 DSCATDSERKKAAERLEQLISLVNRCLIRRTSALLSKYLPVKTEHVVCIKLTPLQTDLYL 407
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
+L+KSD V +++KG + K+ AL++IT LKKLC HPDL++DKI G+DGFEN+ ++LP
Sbjct: 408 HLLKSDMVTKSIKGNDG-KVTSNALAAITLLKKLCAHPDLIIDKIMNGSDGFENSKHLLP 466
Query: 480 TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY 539
Y A++ KL+IELS+KLMVLDTMLAVIK TT D++VL+SNYTQTL+LFERL+KLR Y
Sbjct: 467 PTYIAAHSKKKLMIELSSKLMVLDTMLAVIKTTTTDRVVLISNYTQTLELFERLAKLRNY 526
Query: 540 KYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
+VRLDGSMT KKRAK V+ N TS F+FMLSSKAGGCGLNLIGANRLVMFDPDWNPA
Sbjct: 527 TFVRLDGSMTAKKRAKAVDDINSPTSGVFLFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 586
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSM 658
NDDQAMARVWRDGQKKPCFVYRFL+TGSIEEKMMQRQAHKKALSS VVDCEEDVARHF++
Sbjct: 587 NDDQAMARVWRDGQKKPCFVYRFLATGSIEEKMMQRQAHKKALSSSVVDCEEDVARHFTV 646
Query: 659 SELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDP 718
SELR+LF L ++TISDTH+KIKC+RC+N IQ K PP++SDCT+DLSCWHH +KRWLVDP
Sbjct: 647 SELRTLFNLRQDTISDTHEKIKCTRCINNIQTKLPPVDSDCTNDLSCWHHCADKRWLVDP 706
Query: 719 ILKHCWGAGVSFVFYQHSTKAEKSKVVTEEE---EKEEEE 755
+LK CW AG+S VFYQ+ST ++ ++ E+ +K+EEE
Sbjct: 707 VLKQCWHAGISMVFYQNSTIHKEKPIIEEDNDNIDKKEEE 746
>gi|242021397|ref|XP_002431131.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212516380|gb|EEB18393.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 745
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/742 (68%), Positives = 598/742 (80%), Gaps = 11/742 (1%)
Query: 1 RRSLAPSQ--LSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKE 58
RRS APSQ L K+ ++ I + +K + + RKPL S +++ + E
Sbjct: 2 RRSFAPSQIALGKKRELETTDISSSSKSKRKRRCAQEVRKPLISTQKFPSLINQMTCSFE 61
Query: 59 EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPP 118
+S HE+ IR+IL+KPFK+PI NY GG Y+ +ALG+RR G R+ALHDP PNAL+L++PP
Sbjct: 62 NVSSHEDFIRKILSKPFKIPIPNYQGG-YNCRALGIRRNGGRRALHDPDEPNALILFSPP 120
Query: 119 QLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
+ SAH+ LK + ++ VHVVVDP+LSN+LRPHQREGVKFMY+CVTGV+IE+AYGCIMADE
Sbjct: 121 EFSAHEKLKTNSEEQLVHVVVDPMLSNVLRPHQREGVKFMYDCVTGVKIENAYGCIMADE 180
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKTLQCITLMWTLL+QGP KPLI+KAI+VAPSSLVKNW NEI KWL GRV AL ID
Sbjct: 181 MGLGKTLQCITLMWTLLKQGPDCKPLIEKAIVVAPSSLVKNWYNEINKWLKGRVNALAID 240
Query: 239 GGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
GSK +ID L SFM TY RRPVNPIL+ISYETFR H VLHK EVGLVLCDEGHRLKN
Sbjct: 241 SGSKDDIDRNLQSFMNTYSRRPVNPILIISYETFRLHVKVLHKGEVGLVLCDEGHRLKNH 300
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
E+QTYQALMGL AKRRVLLSGTPIQNDLLEYFSL+HFVNQGILGTA EFRK++E PILRG
Sbjct: 301 ENQTYQALMGLNAKRRVLLSGTPIQNDLLEYFSLIHFVNQGILGTAAEFRKKFEIPILRG 360
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
QD+ ++ ER K E LEQ+ +VNRCLIRRT+ALLSKYLPVKTEQV+CI +T LQK+LY
Sbjct: 361 QDANSTIEERKKGQECLEQMAALVNRCLIRRTAALLSKYLPVKTEQVICITLTGLQKQLY 420
Query: 419 TNLIKSDAVRRTMKGGENTKLGM--TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
+ I SDA+++T++ +N+K GM TALS+IT+LKKLCNHPDLV + I +GFENA+
Sbjct: 421 EDFIASDALKKTVREEKNSKKGMSLTALSAITTLKKLCNHPDLVYENIMKQTEGFENALK 480
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
LP Y + E+S KLM LDT+LA+IK TT+DKIVLVSNYTQTLDLFE+LS+
Sbjct: 481 YLPEKYDIK----NVRPEMSGKLMFLDTLLALIKATTNDKIVLVSNYTQTLDLFEKLSRF 536
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
R Y+YVRLDGSMTIKKR KVVE FN S +FIFMLSSKAGGCGLNLIGANRLVMFDPDW
Sbjct: 537 RNYQYVRLDGSMTIKKRGKVVEKFNDPESKDFIFMLSSKAGGCGLNLIGANRLVMFDPDW 596
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPANDDQAMARVWRDGQKKPCF+YR LSTG+IEEK+ QRQAHKKALSS VVD EEDVARH
Sbjct: 597 NPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIFQRQAHKKALSSTVVDNEEDVARH 656
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWL 715
FS ELR LF+LE T SDTHDK KC+RC+N IQ+KPPP +DCT DLS WHH +K+ L
Sbjct: 657 FSRDELRDLFKLETGTQSDTHDKFKCTRCMNKIQIKPPPEGTDCTSDLSLWHHCYDKKGL 716
Query: 716 VDPILKHCWGAG-VSFVFYQHS 736
VDP+LK CW +G +SFVF+ +S
Sbjct: 717 VDPLLKKCWESGIISFVFHHNS 738
>gi|238814383|ref|NP_001154953.1| RAD54-like [Nasonia vitripennis]
Length = 749
Score = 1005 bits (2599), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/754 (66%), Positives = 586/754 (77%), Gaps = 20/754 (2%)
Query: 2 RSLAPSQLSKRSPEDSPGIKTFPPP---VKKEKRSCTSRKPLGSVDNEDEPNSKLPM--- 55
RS APS++ KR + P + +EK+S K + + + KLP
Sbjct: 3 RSQAPSKIGKRPLLGEVNTQLTQKPRLEIVEEKKSNKENKRRRTEKTIEISDRKLPALTS 62
Query: 56 -----TKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
+E +SEHE +R+ L+KPFK+PI Y G + LG R G R+ALHDP PN
Sbjct: 63 NDISAVQEVISEHEERVRKALSKPFKIPIPGYECSG---RTLGFRFAGPRRALHDPDEPN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALV+Y PP++S H+ LK+D+ K VHVVVDP+L N+LRPHQREGVKFMYECVTG RIE+A
Sbjct: 120 ALVVYAPPEMSEHESLKVDETKKLVHVVVDPLLCNVLRPHQREGVKFMYECVTGKRIEEA 179
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
YGCIMADEMGLGKTLQCITL+WTLL+QGP AKPLI+KAIIVAPSSLVKNW NEI KWL
Sbjct: 180 YGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLQN 239
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
RV L IDGGSK+EID KL FM+TYGRR PIL+ISYETFR HA VLH+++VGLVLCD
Sbjct: 240 RVKPLAIDGGSKSEIDAKLTGFMKTYGRRCATPILIISYETFRLHAHVLHQDDVGLVLCD 299
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN E+QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL+HFVN G+LGTA EFRK+
Sbjct: 300 EGHRLKNSENQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLIHFVNSGLLGTAAEFRKK 359
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E PILRGQD+ A+D ER A ERL +L+ +VN+CLIRRTSALLSKYLP+K E VVCIKM
Sbjct: 360 FENPILRGQDAGATDKERQIAQERLTELVTVVNKCLIRRTSALLSKYLPLKHELVVCIKM 419
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLG-MTALSSITSLKKLCNHPDLVMDKIQTGAD 469
T LQ +LY N IKSD+++++M+ K G ++ALS+IT LKKLCNHPDLV +KIQ +D
Sbjct: 420 TPLQTQLYKNFIKSDSIKKSMQDDGTAKKGSLSALSAITLLKKLCNHPDLVYEKIQENSD 479
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFE A +LP A+Y + +++ ELS KLMVLD +LA IK TT DKIVLVSNYTQTLDL
Sbjct: 480 GFEGAAKLLP----ANYSTKEVMPELSGKLMVLDCLLAFIKSTTTDKIVLVSNYTQTLDL 535
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FERL R YKYVRLDG+M+IKKRAKVV+ FN S +FIFMLSSKAGGCGLNL+GANRL
Sbjct: 536 FERLCAKRKYKYVRLDGTMSIKKRAKVVDNFNNPDSGDFIFMLSSKAGGCGLNLVGANRL 595
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL TG+IEEK+ QRQAHKKALSS VVD
Sbjct: 596 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLCTGTIEEKIFQRQAHKKALSSTVVDQ 655
Query: 649 EEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHH 708
+EDVARHF+ ++LR LF LEE+T+SDTH K KC RC+NGI+VK PP SDCT DLS W H
Sbjct: 656 DEDVARHFTQNDLRDLFSLEESTVSDTHSKFKCKRCINGIEVKGPPENSDCTSDLSDWRH 715
Query: 709 VTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKS 742
+ L D L+ CW +G+SFVF+ S + KS
Sbjct: 716 SQNPKHLPDIPLRQCWSSGISFVFHHRSHEQVKS 749
>gi|307174075|gb|EFN64762.1| DNA repair and recombination protein RAD54-like [Camponotus
floridanus]
Length = 682
Score = 1003 bits (2593), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/680 (71%), Positives = 564/680 (82%), Gaps = 10/680 (1%)
Query: 60 MSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQ 119
+SEHE +R++L+KPFK+P+ Y G + LG+R G R+ LHDP PNAL++Y+PP+
Sbjct: 5 VSEHEERVRKLLSKPFKIPVPGYQLSG---RVLGLRLPGPRRPLHDPNDPNALIVYSPPE 61
Query: 120 LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
LS H+ LKID K VHVVVDP+L N+LRPHQREGVKFMYECVTG RIE+AYGCIMADEM
Sbjct: 62 LSEHERLKIDSCKQLVHVVVDPILCNVLRPHQREGVKFMYECVTGKRIENAYGCIMADEM 121
Query: 180 GLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GLGKTLQCITL+WTLL+QGP AKPLIDKAIIVAPSSLVKNW NEI KWL V L IDG
Sbjct: 122 GLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEINKWLNNIVNTLAIDG 181
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
G KAEID KL FM+TYG R V PIL+ISYETFR HA VLH++EVGLVLCDEGHRLKN E
Sbjct: 182 GKKAEIDTKLLRFMKTYGGRCVTPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLKNSE 241
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+QTYQ+LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFR++YETPILRGQ
Sbjct: 242 NQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQ 301
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D+ A+D +R A ERL L+ +VN+CLIRRTSALLSKYLP+K E VVCIKM +LQ LY
Sbjct: 302 DAAATDDQRKLAQERLSDLVSVVNKCLIRRTSALLSKYLPLKHEFVVCIKMGELQTRLYK 361
Query: 420 NLIKSDAVRRTMKGGENTKLG--MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
N I+S++++R+M+ +N K G ++AL++IT LKKLCNHPDL+ DKI ++GFE A +
Sbjct: 362 NFIQSESIKRSMEEDDNPKKGGHLSALAAITLLKKLCNHPDLIYDKIMEKSEGFEKAAQL 421
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LP+ Y+ + +LL ELS KLMVLD +LA IK TT+DKIVLVSNYTQTLDLFE+L R
Sbjct: 422 LPSHYS----TKQLLPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCNKR 477
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y YVRLDGSMTIKKR+KVVE FN TS++FIFMLSSKAGGCGLNLIGANRLVMFDPDWN
Sbjct: 478 SYNYVRLDGSMTIKKRSKVVENFNSDTSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 537
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PANDDQAMARVWRDGQKK CFVYRFLSTG+IEEK+ QRQAHKKALSS VVD E+DVARHF
Sbjct: 538 PANDDQAMARVWRDGQKKTCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHF 597
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
++++LR LF+LE+NT+SDTHDK KC+RCVNGI+VK PP +SDC DLS W H R L
Sbjct: 598 TINDLRDLFKLEQNTVSDTHDKFKCTRCVNGIEVKGPPEQSDCNSDLSEWRHSHNPRNLP 657
Query: 717 DPILKHCWGAGVSFVFYQHS 736
D L+ CW +G+SFVF+ S
Sbjct: 658 DISLRQCWASGISFVFHHRS 677
>gi|332024911|gb|EGI65099.1| DNA repair and recombination protein RAD54-like protein [Acromyrmex
echinatior]
Length = 681
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/680 (71%), Positives = 563/680 (82%), Gaps = 11/680 (1%)
Query: 60 MSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQ 119
+SEHE +R++L+KPF++PI Y G + LG+R G R+ LHDP PNAL++Y+PP+
Sbjct: 5 VSEHEERVRKLLSKPFQIPIPGYQLSG---RVLGLRLPGPRRPLHDPDEPNALIVYSPPE 61
Query: 120 LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
LS HD LK+D K VHVVVDPVL N+LRPHQREGVKFMYECVTG RIE+AYGCIMADEM
Sbjct: 62 LSEHDRLKVDPCKQLVHVVVDPVLCNVLRPHQREGVKFMYECVTGKRIENAYGCIMADEM 121
Query: 180 GLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GLGKTLQCITL+WTLL+QGP AKPLI+KA+IVAPSSLVKNW NEI KWL V L IDG
Sbjct: 122 GLGKTLQCITLLWTLLKQGPEAKPLIEKAVIVAPSSLVKNWYNEINKWLNNMVNTLAIDG 181
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
G KA+ID +L FM+TYGR V PIL+ISYETFR HA VLH++EVGLVLCDEGHRLKN E
Sbjct: 182 GKKADIDTQLIRFMKTYGR-CVTPILIISYETFRLHAHVLHQDEVGLVLCDEGHRLKNSE 240
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+QTYQ+LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFR++YETPILRGQ
Sbjct: 241 NQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKYETPILRGQ 300
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D+ A+DAERT A ERL L+ IVN+CLIRRTSALLSKYLP+K E VVCIKM +LQ +LY
Sbjct: 301 DAAATDAERTVAQERLSDLVSIVNKCLIRRTSALLSKYLPLKHELVVCIKMGELQTQLYK 360
Query: 420 NLIKSDAVRRTMKGGENTKL--GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
N I+SD+++R+M+ +N K ++AL++IT LKKLCNHPDL+ DKI+ ADG E A ++
Sbjct: 361 NFIQSDSIKRSMEENDNPKKTGSLSALAAITLLKKLCNHPDLIYDKIKEKADGLEKAASL 420
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LP Y+A +L+ ELS KLMVLD +LA IK TT+DKIVLVSNYTQTLDLFE+L R
Sbjct: 421 LPPNYSAK----ELMPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKR 476
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y YVRLDG+MTIKKRAKVV+ FN +SN+FIFMLSSKAGGCGLNLIGANRLVMFDPDWN
Sbjct: 477 SYNYVRLDGTMTIKKRAKVVDNFNSDSSNDFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 536
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PANDDQAMARVWRDGQKKPCFVYRFLSTG+IEEK+ QRQAHKKALSS VVD E+DVARHF
Sbjct: 537 PANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHF 596
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
++++LR LF+LEENT+SDTH K KC RC+NGI+ K P +SDC DLS W H R L
Sbjct: 597 TINDLRDLFKLEENTVSDTHAKFKCKRCINGIEAKGPSEQSDCNSDLSDWRHSHNPRHLP 656
Query: 717 DPILKHCWGAGVSFVFYQHS 736
D L+ CW +G+SFVF+ S
Sbjct: 657 DIPLRQCWASGISFVFHHRS 676
>gi|340726376|ref|XP_003401535.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
terrestris]
Length = 746
Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/751 (66%), Positives = 586/751 (78%), Gaps = 28/751 (3%)
Query: 2 RSLAPSQLSKR----SPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSK----- 52
RSLAPS+ KR ++ I+ PV++ T +K +V N P K
Sbjct: 3 RSLAPSKNGKRPLLFDISNNVTIRQVVSPVQQ-----TKKKVCRNVKNVQIPEYKAVALS 57
Query: 53 ---LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAP 109
+ T+E +SEHE +++I +KPFK+PI Y G +ALG+R G R+ LHDP
Sbjct: 58 ANDVQATQEVISEHEERMKKIFSKPFKIPIPGYQLSG---RALGIRLSGPRRPLHDPEEA 114
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
NALV+Y+PP+LS H+ LKID+ K VHVVVDP+L NILRPHQREGVKFMYECVTG RIE
Sbjct: 115 NALVVYSPPELSEHEKLKIDQSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEG 174
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCITL+WTLL+QGP AKPLI+KAIIVAPSSLVKNW NEI KWL
Sbjct: 175 AYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLK 234
Query: 230 GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLC 289
RV L IDGG+K +ID KL FM+TYGRR +NPIL+ISYETFR HA VLH++EVGLVLC
Sbjct: 235 NRVQPLAIDGGNKVDIDTKLTGFMKTYGRRCINPILIISYETFRLHAQVLHQDEVGLVLC 294
Query: 290 DEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRK 349
DEGHRLKN E+QTYQAL+ LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFRK
Sbjct: 295 DEGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRK 354
Query: 350 QYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIK 409
++E PILRGQD+ A+D ER A ERL +L+ IVN+CLIRRTSALLSKYLP+K E VVCI+
Sbjct: 355 KFEIPILRGQDAAATDTERKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKYELVVCIR 414
Query: 410 MTDLQKELYTNLIKSDAVRRTM-KGGENTKLG--MTALSSITSLKKLCNHPDLVMDKIQT 466
M LQ +LY + I+SD+VR++M + N+K G + L++IT LKKLC HPDLV DKI
Sbjct: 415 MGKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDLVYDKILE 474
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
+DGFENA ++P +Y + +++ ELS KLMVLD +LA IK TT+DKIVLVSNYTQT
Sbjct: 475 KSDGFENAAKLMP----PNYNTKEIMPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQT 530
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGA 585
LDLFE+L R Y YVRLDG+MTIKKR+KVVE FN SN+FIFMLSSKAGGCGLNLIGA
Sbjct: 531 LDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFIFMLSSKAGGCGLNLIGA 590
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPANDDQAMARVWRDGQKK CF+YRFL TG+IEEK+ QRQAHKKALSS V
Sbjct: 591 NRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIEEKIFQRQAHKKALSSTV 650
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD EEDVARHF++++LR LF+LEENTISDTH K KC RCVNGI+VK PP +SDC DLS
Sbjct: 651 VDQEEDVARHFTLNDLRDLFKLEENTISDTHAKFKCKRCVNGIEVKGPPEQSDCNSDLSD 710
Query: 706 WHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
W H+ R L D L+ CW G+SFVF S
Sbjct: 711 WRHIYNPRHLPDIPLRQCWSCGISFVFCHRS 741
>gi|350424065|ref|XP_003493677.1| PREDICTED: DNA repair and recombination protein RAD54-like [Bombus
impatiens]
Length = 748
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/751 (66%), Positives = 586/751 (78%), Gaps = 28/751 (3%)
Query: 2 RSLAPSQLSKR----SPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSK----- 52
RSLAPS+ KR ++ ++ PV++ T +K +V N P K
Sbjct: 5 RSLAPSKNGKRPLLFDISNNVAMRQVVSPVQQ-----TKKKACRNVKNVQIPEYKAVALS 59
Query: 53 ---LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAP 109
+ T+E +SEHE +++I +KPFK+PI Y G +ALG+R G R+ LHDP
Sbjct: 60 ANDVQATQEVISEHEERMKKIFSKPFKIPIPGYQLSG---RALGIRLSGPRRPLHDPEEA 116
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
NALV+Y+PP+LS H+ LKID+ K VHVVVDP+L NILRPHQREGVKFMYECVTG RIE
Sbjct: 117 NALVVYSPPELSEHEKLKIDQSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEG 176
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCITL+WTLL+QGP AKPLI+KAIIVAPSSLVKNW NEI KWL
Sbjct: 177 AYGCIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKWLK 236
Query: 230 GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLC 289
RV L IDGG+K +ID KL FM+TYGRR +NPIL+ISYETFR HA VLH++EVGLVLC
Sbjct: 237 NRVQPLAIDGGNKTDIDTKLTGFMKTYGRRCINPILIISYETFRLHAQVLHQDEVGLVLC 296
Query: 290 DEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRK 349
DEGHRLKN E+QTYQAL+ LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFRK
Sbjct: 297 DEGHRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRK 356
Query: 350 QYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIK 409
++E PILRGQD+ A+D ER A ERL +L+ IVN+CLIRRTSALLSKYLP+K E VVCI+
Sbjct: 357 KFEIPILRGQDAAATDTERKLAQERLAELVSIVNKCLIRRTSALLSKYLPLKYELVVCIR 416
Query: 410 MTDLQKELYTNLIKSDAVRRTM-KGGENTKLG--MTALSSITSLKKLCNHPDLVMDKIQT 466
M LQ +LY + I+SD+VR++M + N+K G + L++IT LKKLC HPDLV DKI
Sbjct: 417 MGKLQTDLYNSFIQSDSVRKSMEENSANSKKGKSFSTLAAITLLKKLCCHPDLVYDKILE 476
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
+DGFENA ++P Y+ + +++ ELS KLMVLD +LA IK TT+DKIVLVSNYTQT
Sbjct: 477 KSDGFENAAKLMPPNYS----TKEIMPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQT 532
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGA 585
LDLFE+L R Y YVRLDG+MTIKKR+KVVE FN SN+FIFMLSSKAGGCGLNLIGA
Sbjct: 533 LDLFEKLCHKRCYNYVRLDGTMTIKKRSKVVEKFNDPNSNDFIFMLSSKAGGCGLNLIGA 592
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPANDDQAMARVWRDGQKK CF+YRFL TG+IEEK+ QRQAHKKALSS V
Sbjct: 593 NRLVMFDPDWNPANDDQAMARVWRDGQKKLCFIYRFLCTGTIEEKIFQRQAHKKALSSTV 652
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD EEDVARHF++++LR LF+LEENTISDTH K KC RC+NGI+VK PP +SDC DLS
Sbjct: 653 VDQEEDVARHFTLNDLRDLFKLEENTISDTHAKFKCKRCINGIEVKGPPEQSDCNSDLSD 712
Query: 706 WHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
W H+ R L D L+ CW G+SFVF S
Sbjct: 713 WRHIYNPRPLPDIPLRQCWSCGISFVFCHRS 743
>gi|307203835|gb|EFN82771.1| DNA repair and recombination protein RAD54-like [Harpegnathos
saltator]
Length = 679
Score = 994 bits (2570), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/680 (70%), Positives = 562/680 (82%), Gaps = 10/680 (1%)
Query: 60 MSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQ 119
+SEHE +R++L KPFK+P+ Y S + LG G R+ LHDP NAL++Y+PP+
Sbjct: 2 ISEHEERVRKLLNKPFKIPVPGYE---LSRRYLGAYFSGPRRPLHDPNEANALIVYSPPE 58
Query: 120 LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
+S H+ LK D K VHVV+DP+L N+LRPHQREGVKFMYECVTG RIEDAYGCIMADEM
Sbjct: 59 MSEHERLKADLCKQLVHVVIDPLLCNVLRPHQREGVKFMYECVTGKRIEDAYGCIMADEM 118
Query: 180 GLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GLGKTLQCITL+WTLL+QGP AKPLIDKAIIVAPSSLVKNW NEI KWL RV+AL IDG
Sbjct: 119 GLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIYKWLNNRVSALAIDG 178
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
G K +ID KL SFM+TY R V PIL+ISYETFR HA VLH+NEVGLVLCDEGHRLKN E
Sbjct: 179 GKKKDIDTKLISFMKTYNGRCVYPILIISYETFRLHAHVLHQNEVGLVLCDEGHRLKNSE 238
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+QTYQ+LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFR+++ETPILRGQ
Sbjct: 239 NQTYQSLMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRRKFETPILRGQ 298
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D+ A+D ER A ERL L+ +VN+CLIRRTSALLSKYLP+K E VVCIKM +LQ LY
Sbjct: 299 DAEATDEERKLAEERLSDLVSVVNKCLIRRTSALLSKYLPLKHELVVCIKMGELQTRLYK 358
Query: 420 NLIKSDAVRRTMKGGENTKLG--MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
+ I SD+++++M+ +N+K G ++AL++IT LKKLCNHPDL+ DKI+ +DGFENA +
Sbjct: 359 SFIHSDSIKKSMEDSDNSKKGGSLSALAAITLLKKLCNHPDLIYDKIKERSDGFENAARL 418
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LP A+Y + +LL +LS KLMVLD +LA IK TT+DKIVLVSNYTQTLDLFE+L R
Sbjct: 419 LP----ANYSTKELLPDLSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLFEKLCHKR 474
Query: 538 GYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY YVRLDG+MTIKKR+KVV+ FN ++S++FIFMLSSKAGGCGLNLIGANRLVMFDPDWN
Sbjct: 475 GYNYVRLDGTMTIKKRSKVVDNFNSESSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 534
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PANDDQAMARVWRDGQKKPCFVYRFLSTG+IEEK+ QRQAHKKALSS VVD E+DVARHF
Sbjct: 535 PANDDQAMARVWRDGQKKPCFVYRFLSTGTIEEKIFQRQAHKKALSSTVVDQEDDVARHF 594
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
+ ++LR LF+LEENT+SDTH K KC RC+NGI+ K P +SDC DLS W H R+L
Sbjct: 595 TQTDLRDLFKLEENTVSDTHAKFKCKRCINGIETKGPSEQSDCNSDLSEWRHSHNPRYLP 654
Query: 717 DPILKHCWGAGVSFVFYQHS 736
D L+ CW +G+SFVF+ S
Sbjct: 655 DIPLRQCWSSGISFVFHHRS 674
>gi|383848072|ref|XP_003699676.1| PREDICTED: DNA repair and recombination protein RAD54 [Megachile
rotundata]
Length = 760
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/753 (66%), Positives = 585/753 (77%), Gaps = 38/753 (5%)
Query: 2 RSLAPSQLSKRSP-EDSPGIKTFPPPVKK----EKRSCTSRKPLG---------SVDNED 47
RSLAPSQ KR D T P V + +K+ C + K + S DN
Sbjct: 23 RSLAPSQKGKRPLLSDISNDVTLSPTVPQVHHVKKKICRNIKDVQIPEYKAVTLSADN-- 80
Query: 48 EPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPT 107
+ T+E +SEHE ++++L+KPFK+PI Y G + LG R G R+ LHDP
Sbjct: 81 -----IQATQEVISEHEERVKKLLSKPFKIPIPGYQLSG---RTLGTRLSGPRRPLHDPN 132
Query: 108 APNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRI 167
NAL++Y+PP+LS H+ LKID+ K VHVVVDP+L NILRPHQREGVKFMYECVTG RI
Sbjct: 133 EANALIVYSPPELSEHERLKIDQSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGQRI 192
Query: 168 EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW 227
E AYGCIMADEMGLGKTLQCITLMWTLL+QGP AKPLI+KAIIVAPSSLVKNW NEI KW
Sbjct: 193 EGAYGCIMADEMGLGKTLQCITLMWTLLKQGPEAKPLIEKAIIVAPSSLVKNWYNEIFKW 252
Query: 228 LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
L RV L IDGG+KA+ID KL FM+TYGRR NPIL+ISYETFR HA VLH++EVGLV
Sbjct: 253 LKNRVQPLAIDGGNKADIDAKLTGFMKTYGRRCANPILIISYETFRLHAHVLHQDEVGLV 312
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
LCDEGHRLKN E+QTYQALM LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEF
Sbjct: 313 LCDEGHRLKNSENQTYQALMNLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEF 372
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
RK++E PILRGQD+ A+D ER A ERL +L+ +VN+CLIRRTSALLSKYLP+K E VVC
Sbjct: 373 RKKFEIPILRGQDAAATDTERKLAQERLSELVTLVNKCLIRRTSALLSKYLPLKHELVVC 432
Query: 408 IKMTDLQKELYTNLIKSDAVRRTM-KGGENTKLG--MTALSSITSLKKLCNHPDLVMDKI 464
IKM LQ +LY N I+SD+++++M + + +K G ++ALS+IT LKKLCNHPDLV +KI
Sbjct: 433 IKMGKLQTDLYKNFIQSDSIKKSMEENSDGSKKGKSLSALSAITLLKKLCNHPDLVYEKI 492
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYT 524
+DGFENA ++P Y+ + ++L ELS KLMVLD +LA IK TT DKIVLVSNYT
Sbjct: 493 LQQSDGFENAAKLMPPNYS----TKEILPELSGKLMVLDCLLASIKTTTKDKIVLVSNYT 548
Query: 525 QTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLI 583
QTLDLFE+L R Y YVRLDG+MTIKKR+KVV+ FN + SN+FIFMLSSKAGGCGLNLI
Sbjct: 549 QTLDLFEKLCHKRSYNYVRLDGTMTIKKRSKVVDKFNDENSNDFIFMLSSKAGGCGLNLI 608
Query: 584 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS 643
GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF TG+IEEK+ QRQAHKKALSS
Sbjct: 609 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIEEKIFQRQAHKKALSS 662
Query: 644 CVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDL 703
VVD EEDVARHF++++LR LF+LEENTISDTH K KC RCVNG++VK PP++SDC DL
Sbjct: 663 TVVDQEEDVARHFTLNDLRDLFKLEENTISDTHAKFKCKRCVNGVEVKGPPVQSDCNSDL 722
Query: 704 SCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
S W H R L D L+ CW +G+SFVF+ S
Sbjct: 723 SDWRHAHNPRNLPDLSLRQCWSSGISFVFHHRS 755
>gi|328779113|ref|XP_392959.4| PREDICTED: Rad54 protein isoform 1 [Apis mellifera]
Length = 741
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/750 (66%), Positives = 587/750 (78%), Gaps = 31/750 (4%)
Query: 2 RSLAPSQLSKRSP-EDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSK-------- 52
RSLAPS+ KR D T P V + +K +V N + P K
Sbjct: 3 RSLAPSKRGKRPLLSDISNNLTLSPIVSVHQ---VKKKICYNVKNVEIPEYKAVILSAND 59
Query: 53 LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNAL 112
+ T+E +SEHE +++IL+KPFK+PI Y G + LG+R G R+ LHDP NAL
Sbjct: 60 VQTTQEVISEHEQRMKKILSKPFKIPIPGYQLSG---RTLGIRLSGPRRPLHDPDEANAL 116
Query: 113 VLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYG 172
++Y+P +LS H+ LKID K VHVVVDP+L NILRPHQREGVKFMYECVTG RIE AYG
Sbjct: 117 IVYSPSELSEHEKLKIDLSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEGAYG 176
Query: 173 CIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRV 232
CIMADEMGLGKTLQCITL+WTLL+QGP AKPLIDKAIIVAPSSLVKNW NEI KWL R+
Sbjct: 177 CIMADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIFKWLKNRI 236
Query: 233 AALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEG 292
L IDGG+KA+ID KL FM+TYGR+ VNPIL+ISYETFR HA +LH++EVGL+LCDEG
Sbjct: 237 QPLAIDGGNKADIDTKLIGFMKTYGRKCVNPILIISYETFRLHAHILHQDEVGLILCDEG 296
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
HRLKN E+QTYQAL+ LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFRK++E
Sbjct: 297 HRLKNSENQTYQALINLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFE 356
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PILRGQD+ A+DAER A ERL++LI IVN+CLIRRTSALLSKYLP+K E VVCIKM
Sbjct: 357 IPILRGQDAAATDAERKLAQERLKELITIVNKCLIRRTSALLSKYLPLKYELVVCIKMGK 416
Query: 413 LQKELYTNLIKSDAVRRTMKGG-ENTKLG----MTALSSITSLKKLCNHPDLVMDKIQTG 467
+Q +LY N I+SD+++++M+ EN K G ++ LS+IT LKKLCNHPDLV +KI
Sbjct: 417 IQTDLYKNFIQSDSIKKSMEENPENFKKGKRESLSTLSAITLLKKLCNHPDLVYEKILEK 476
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
+DGFENA ++P+ Y+ + ++L ELS KLMVLD +LA IK TT+DKIVLVSNYTQTL
Sbjct: 477 SDGFENAAKLIPSNYS----TKEILPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTL 532
Query: 528 DLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGAN 586
DLFE+L R Y YVRLDG+MTIKKR+KVVE FN + SN+FIFMLSSKAGGCGLNLIGAN
Sbjct: 533 DLFEKLCYKRCYNYVRLDGTMTIKKRSKVVERFNDSNSNDFIFMLSSKAGGCGLNLIGAN 592
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
RLVMFDPDWNPANDDQAMARVWRDGQKKPCF TG+IEEK+ QRQAHKKALSS VV
Sbjct: 593 RLVMFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIEEKIFQRQAHKKALSSTVV 646
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCW 706
D EEDVARHF++++LR LF+LEENTISDTHDK KC RC+NGI+VK PP +SDC DLS W
Sbjct: 647 DQEEDVARHFTLNDLRDLFKLEENTISDTHDKFKCKRCINGIEVKGPPEQSDCNSDLSDW 706
Query: 707 HHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
HV R L D L+ CW +G+SFVFY S
Sbjct: 707 RHVHNPRNLPDIPLRQCWLSGISFVFYHRS 736
>gi|380024032|ref|XP_003695811.1| PREDICTED: DNA repair and recombination protein RAD54-like [Apis
florea]
Length = 716
Score = 981 bits (2537), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 478/687 (69%), Positives = 561/687 (81%), Gaps = 19/687 (2%)
Query: 56 TKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLY 115
T+E +SEHE +++IL KPFK+PI Y G + LG+R G R+ LHDP NAL++Y
Sbjct: 38 TQEVISEHEQRMKKILNKPFKIPIPGYQLSG---RVLGIRLSGPRRPLHDPNEANALIVY 94
Query: 116 TPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIM 175
+P +LS H+ LK+D K VHVVVDP+L NILRPHQREGVKFMYECVTG RIE AYGCIM
Sbjct: 95 SPCELSEHEKLKVDLSKQLVHVVVDPLLCNILRPHQREGVKFMYECVTGKRIEGAYGCIM 154
Query: 176 ADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAAL 235
ADEMGLGKTLQCITL+WTLL+QGP AKPLIDKAIIVAPSSLVKNW NEI KWL R+ L
Sbjct: 155 ADEMGLGKTLQCITLLWTLLKQGPEAKPLIDKAIIVAPSSLVKNWYNEIFKWLKNRIQPL 214
Query: 236 PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
IDGG+K +ID KL FM+TYGR+ VNPIL+ISYETFR HA +LH++EVGL+LCDEGHRL
Sbjct: 215 AIDGGNKTDIDTKLIGFMKTYGRKCVNPILIISYETFRLHAHILHQDEVGLILCDEGHRL 274
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN E+QTYQAL+ LKAKRR+LLSGTPIQNDLLEYFSLVHFVNQG+LGTAQEFRK++E PI
Sbjct: 275 KNSENQTYQALINLKAKRRILLSGTPIQNDLLEYFSLVHFVNQGLLGTAQEFRKKFEIPI 334
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
LRGQD+ A+D ER A ERL++L+ IVN+CLIRRTSALLSKYLP+K E VVCIKM +Q
Sbjct: 335 LRGQDAAATDTERKLAQERLKELVAIVNKCLIRRTSALLSKYLPLKYELVVCIKMGKVQT 394
Query: 416 ELYTNLIKSDAVRRTMKGG-ENTKLG----MTALSSITSLKKLCNHPDLVMDKIQTGADG 470
+LY N I+SD+++++M+ EN K G ++ LS+IT LKKLCNHPDLV +KI +DG
Sbjct: 395 DLYKNFIQSDSIKKSMEENLENCKKGKRESLSTLSAITLLKKLCNHPDLVYEKILEKSDG 454
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FENA ++P+ Y+ + ++L ELS KLMVLD +LA IK TT+DKIVLVSNYTQTLDLF
Sbjct: 455 FENAAKLMPSNYS----TKEILPELSGKLMVLDCLLASIKTTTNDKIVLVSNYTQTLDLF 510
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L R Y YVRLDG+MTIKKR+KVVE FN + SN+FIFMLSSKAGGCGLNLIGANRL+
Sbjct: 511 EKLCYKRCYNYVRLDGTMTIKKRSKVVERFNDSNSNDFIFMLSSKAGGCGLNLIGANRLI 570
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPANDDQAMARVWRDGQKKPCF TG+IEEK+ QRQAHKKALSS VVD E
Sbjct: 571 MFDPDWNPANDDQAMARVWRDGQKKPCF------TGTIEEKIFQRQAHKKALSSTVVDQE 624
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
EDVARHF++++LR LF+LEENTISDTHDK KC RC+NGI+VK PP +SDC DLS W HV
Sbjct: 625 EDVARHFTLNDLRDLFKLEENTISDTHDKFKCKRCINGIEVKGPPEQSDCNSDLSDWRHV 684
Query: 710 TEKRWLVDPILKHCWGAGVSFVFYQHS 736
R L D L+ CW +G+SFVFY S
Sbjct: 685 YNPRNLPDIPLRQCWLSGISFVFYHRS 711
>gi|357631781|gb|EHJ79250.1| steroid receptor-interacting snf2 domain protein [Danaus plexippus]
Length = 764
Score = 972 bits (2513), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/760 (63%), Positives = 578/760 (76%), Gaps = 33/760 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV----KKEKRSCTSRKPLGSVDNEDEPNSKLPMT 56
RRSLAPSQ+ G F P+ ++KR C +R PL ++ ++
Sbjct: 2 RRSLAPSQIGS-------GDTVFKSPLINSSNRKKRECNARIPL----------AQKSLS 44
Query: 57 KEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYT 116
+ SEHENLI+QIL+KPFKVP+ NY Y +K+LG++R R+ LHDP PNALVLY
Sbjct: 45 QLSTSEHENLIKQILSKPFKVPLPNYVSS-YCSKSLGLKRTQVRRPLHDPDEPNALVLYR 103
Query: 117 PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMA 176
PP + H+ +K++ ++I+V VVVDPVL NILRPHQREGVKFMY+CVTG +I++AYGCIMA
Sbjct: 104 PPYMPEHEKMKMNANEIKVAVVVDPVLGNILRPHQREGVKFMYDCVTGAQIDNAYGCIMA 163
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP 236
DEMGLGKTLQCITL+WTLLRQGP KP I KAIIV PSSLVKNW NEI KWLG R+ ALP
Sbjct: 164 DEMGLGKTLQCITLLWTLLRQGPDCKPTICKAIIVCPSSLVKNWYNEIGKWLGQRINALP 223
Query: 237 IDGGSKAEIDNKLNSFMQTYGR-RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
+DGGSKAEI KL FM T+ R P+L+ISYETFR ++++LH +EVGLVLCDEGHRL
Sbjct: 224 MDGGSKAEITLKLQQFMNTFAAIRVATPVLIISYETFRIYSNILHASEVGLVLCDEGHRL 283
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN E+QTYQALMGLKAKRR+L+SGTPIQNDL EYFSLVHFVN GILGTAQ+F+K+YE PI
Sbjct: 284 KNSENQTYQALMGLKAKRRILISGTPIQNDLTEYFSLVHFVNSGILGTAQDFKKRYENPI 343
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
L+GQD+ A+ ER KA E L+ L IVN+C+IRRTS+LL+KYLPVK EQV+C+KMT LQ
Sbjct: 344 LKGQDALATPQERQKAQECLQTLTSIVNKCMIRRTSSLLTKYLPVKFEQVICVKMTPLQT 403
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAM 475
+LY N I SDA++ G K ++ALSSIT LKKLCNHPDLV DKI ++GFE
Sbjct: 404 QLYRNFINSDAIKNKF-AGTGDKNTLSALSSITMLKKLCNHPDLVYDKIMERSEGFEKGK 462
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
++LP+ Y + E S KLM+LD +LA +K TDDKIVLVSNYTQTLDLFE+L +
Sbjct: 463 DLLPSNYDIK----DVRPEYSGKLMILDCILANLKTNTDDKIVLVSNYTQTLDLFEKLCR 518
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
R Y+YVRLDGSMTIKKRAKVVE+FN K S E+IFMLSSKAGGCGLNLIGANRL+MFDPD
Sbjct: 519 KRCYQYVRLDGSMTIKKRAKVVESFNSKESKEWIFMLSSKAGGCGLNLIGANRLIMFDPD 578
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNPANDDQAMARVWRDGQKKPC++YR L+TG+IEEK+ QRQAHKKALS VVD ED R
Sbjct: 579 WNPANDDQAMARVWRDGQKKPCYIYRLLATGTIEEKIFQRQAHKKALSDTVVDQNEDSMR 638
Query: 655 HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRW 714
HF+ +L+ LF+LE+NT+SDTH K KC RCVN IQV PP SDCT DLS W+H +K+
Sbjct: 639 HFTSDDLKDLFRLEDNTLSDTHSKFKCKRCVNNIQVTLPPENSDCTSDLSNWYHCADKKN 698
Query: 715 LVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKE 752
L D +LK CW +SFVF+ S + E + +EE KE
Sbjct: 699 LADLVLKQCWDLAKSISFVFHHRSAQTEAE--MGKEENKE 736
>gi|432853422|ref|XP_004067699.1| PREDICTED: DNA repair and recombination protein RAD54-like [Oryzias
latipes]
Length = 733
Score = 951 bits (2457), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/743 (63%), Positives = 578/743 (77%), Gaps = 16/743 (2%)
Query: 1 RRSLAPSQLSKRS-PEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEE 59
RRSLAPSQ++KR +DS T+ P K KR P + + P T +
Sbjct: 2 RRSLAPSQVAKRKHADDSREDVTWSPSKDKRKRKEEEPPPREPLCQLNRP------TCTD 55
Query: 60 MSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQ 119
+HE IR IL+KPFKVPI NY G +ALG++R G RKALHDP A +ALVLY PP
Sbjct: 56 ADKHEAFIRSILSKPFKVPIPNYCGS-LGIRALGLKRSGVRKALHDPFAEDALVLYEPPN 114
Query: 120 LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
LSAHDL++ DKDK+ VHVVVDPVL +LRPHQREGV+F++ECVTG RI ++GCIMADEM
Sbjct: 115 LSAHDLIRADKDKLPVHVVVDPVLGKVLRPHQREGVRFLWECVTGRRIPGSHGCIMADEM 174
Query: 180 GLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GLGKTLQCI L+WTLLRQ P KP IDKAI+V+PSSLV+NW NE+ KWLGGRV+ + IDG
Sbjct: 175 GLGKTLQCIALVWTLLRQSPDGKPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVSPVAIDG 234
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
GSK EID +L +F+ G R PIL+ISYETFR HA+VLH+ VGLV+CDEGHRLKN +
Sbjct: 235 GSKEEIDRQLVNFVSQNGLRVPTPILIISYETFRLHAAVLHRGRVGLVICDEGHRLKNAD 294
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+QTYQAL +KA+RRVL+SGTPIQNDLLEYFSLVHFVN GILG+AQ+F+K++E PIL+G+
Sbjct: 295 NQTYQALNAMKAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGSAQDFKKRFELPILKGR 354
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D+ ASDA+R E+L++LIGIVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ ELY
Sbjct: 355 DADASDADRRAGEEKLKELIGIVNRCLIRRTSDILSKYLPVKVEQVVCCRLTPLQAELYR 414
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
++ +T++ G + +++LSSITSLKKLCNHP L+ DK +G +GF+ A+++ P
Sbjct: 415 LFLRQAKPLQTLQQGS---MNVSSLSSITSLKKLCNHPTLIHDKCVSGEEGFDGALDLFP 471
Query: 480 TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY 539
GY+ S ++ +LS K++VLD +LA+ + TT DK+VLVSNYTQTLDLFE+L + R Y
Sbjct: 472 PGYS----SKEVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEKLCRSRRY 527
Query: 540 KYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
YVRLDGSM+IKKRAK+VE FN S+ +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA
Sbjct: 528 LYVRLDGSMSIKKRAKMVERFNSPSSPDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 587
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSM 658
ND+QAMARVWRDGQKK C+VYR L+TG+IEEK++QRQAHKKALSSCVVD E+DV RHFS+
Sbjct: 588 NDEQAMARVWRDGQKKTCYVYRLLTTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSL 647
Query: 659 SELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDP 718
ELR LF L E T SDTHDK +C RCVNG QV+PP +DCT DLS W+H +KR L+DP
Sbjct: 648 GELRELFTLNEETASDTHDKFRCRRCVNGRQVRPPAEGADCTSDLSQWNHCFDKRGLLDP 707
Query: 719 ILKHCWGAGVSFVFYQHSTKAEK 741
+LK W A VSFVF+Q S + ++
Sbjct: 708 VLKASWDAAVSFVFHQRSHEEQR 730
>gi|157130680|ref|XP_001661961.1| steroid receptor-interacting snf2 domain protein [Aedes aegypti]
gi|108881922|gb|EAT46147.1| AAEL002647-PA [Aedes aegypti]
Length = 791
Score = 945 bits (2443), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/758 (62%), Positives = 567/758 (74%), Gaps = 22/758 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV---KKEKRSCTSRKPLGSVDNEDEPNSKLPMTK 57
R+S APSQ +P +S F P+ K R C R + ++ P K
Sbjct: 2 RKSTAPSQSLALTPVNS----AFKSPISLSNKRTRECRDR------SKDKIKDTGPPAPK 51
Query: 58 EEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP 117
SE+E +I++IL++PFKVPI NY ++T+ LG++R AR+ALHDP A NALVLYTP
Sbjct: 52 ISASEYELMIQKILSRPFKVPIANYVPE-HTTRCLGMKRPAARRALHDPFACNALVLYTP 110
Query: 118 PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
+L+ HD LK D KIQVHV+VDP+L NILRPHQREGV+FMYECVTG R D GCIMAD
Sbjct: 111 EELTEHDKLKSDPGKIQVHVMVDPLLGNILRPHQREGVRFMYECVTGKR-GDFQGCIMAD 169
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI 237
EMGLGKTLQCITL+WTLLRQ P KP I+KA+IV PSSLVKNW E KWLG RV L I
Sbjct: 170 EMGLGKTLQCITLLWTLLRQSPDCKPTINKAVIVCPSSLVKNWYKEFGKWLGCRVNCLAI 229
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
DGGSK +L FM R P+L+ISYETFR ++ +L+ +EVG VLCDEGHRLKN
Sbjct: 230 DGGSKEHTTKELEQFMANQSMRHGTPVLIISYETFRLYSHILNNSEVGAVLCDEGHRLKN 289
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
CE+ TYQALMGLK KRRVLLSGTPIQNDL EY+SL+HFVN G+LG+ EFR+Q+E PILR
Sbjct: 290 CENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTNEFRRQFENPILR 349
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
GQD+ A+++ER KA ERL++L VNRC+IRRTSALL+KYLP+K E VVC+KMT++Q EL
Sbjct: 350 GQDANATESERQKATERLQELTAQVNRCMIRRTSALLTKYLPIKFEMVVCVKMTEIQTEL 409
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + ++SD++RR+M K +TALS+ITSLKKLCNHPDLV +KIQ ADGFENA I
Sbjct: 410 YKSFLQSDSIRRSMLEKAQVKASLTALSNITSLKKLCNHPDLVYEKIQERADGFENAHKI 469
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LP+ Y+ S +L E KLMVLD MLA IKM TDDKIVLVSNYTQTLDLFE+L + R
Sbjct: 470 LPSNYS----SKELRPEFGGKLMVLDCMLASIKMNTDDKIVLVSNYTQTLDLFEKLCRKR 525
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY YVRLDGSMTIKKR KVV+ FNK S EFIFMLSSKAGGCGLNLIGANRLVMFDPDWN
Sbjct: 526 GYCYVRLDGSMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 585
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PAND+QAMARVWRDGQKKPCF+YR L+TG+IEEK+ QRQ HKKALS+ VVD +ED RHF
Sbjct: 586 PANDEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALSNTVVDNDEDGERHF 645
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
+ +L+ LF+L+E+TISDTH K KC RCVN IQ+K PP +SDCT DLS W+H + + +
Sbjct: 646 TQDDLKDLFRLDESTISDTHSKFKCKRCVNNIQMKLPPEDSDCTSDLSHWYHCSNNKGIP 705
Query: 717 DPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKE 752
D IL W VSFVF+ S A + + E++ E
Sbjct: 706 DDILSKSWDMTKCVSFVFHHRSNSAVVEQQIAEQKRAE 743
>gi|390335885|ref|XP_783733.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 943 bits (2438), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/722 (63%), Positives = 560/722 (77%), Gaps = 27/722 (3%)
Query: 20 IKTFPPPVKKEKRSCTSRKPLG---SVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFK 76
+K PP + C R+PL SV + + +S+ MS+HE LI++IL+KPFK
Sbjct: 55 LKGLPPGM------CRMRQPLAVRTSVQDGGDRSSR-------MSDHEALIKKILSKPFK 101
Query: 77 VPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVH 136
VPILNY + LG+RR+G R+ LHDPT ALVL++PP+LSAH+ L +DK+K VH
Sbjct: 102 VPILNYQAT-EGPRGLGMRRQGVRQPLHDPTEEGALVLFSPPELSAHEQLSVDKEKQPVH 160
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
VVVDP+LS +LRPHQREGVKF+++CVTG RIE ++GCIMADEMGLGKTLQC+TLMWTLLR
Sbjct: 161 VVVDPILSKVLRPHQREGVKFLWDCVTGRRIEGSFGCIMADEMGLGKTLQCVTLMWTLLR 220
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
Q P KP IDK I+VAPSSLVKNW NEI KWLGG+V L ID G+K EID L+SFM+
Sbjct: 221 QSPDCKPEIDKVIVVAPSSLVKNWYNEIRKWLGGKVNPLAIDSGTKKEIDRNLDSFMRQQ 280
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
GRR PIL+ISYETFR HA VLHK EVGLV+CDEGHRLKNCE+QTYQAL GL KRRVL
Sbjct: 281 GRRTPTPILIISYETFRLHAEVLHKGEVGLVICDEGHRLKNCENQTYQALNGLPGKRRVL 340
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQNDLLEYFSLVH+VNQGILGTAQEF+K +E+PILRG+DSCASD E+ + E+L+
Sbjct: 341 LSGTPIQNDLLEYFSLVHYVNQGILGTAQEFKKNFESPILRGRDSCASDKEKQRGQEKLQ 400
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
QL +VN+C+IRRT++LL+KYLPVK EQVVC ++T +Q +Y +K+ MK
Sbjct: 401 QLAILVNKCIIRRTASLLAKYLPVKEEQVVCCRLTXMQSCIYQQYVKAMMKECRMK---- 456
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
T+ ++ LS+IT LKKLCNHP LV DK + DGF + + P G Y + +L ELS
Sbjct: 457 TQGKVSTLSAITHLKKLCNHPALVYDKCVSSKDGFHDMLQNFPPG----YNNKQLRPELS 512
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
K+ VLD +LA+ K ++ DK+VLVSNYTQTLD+FE+L +LRGY +VRLDGSM+IKKRAKV
Sbjct: 513 GKMQVLDYILAITKTSSSDKVVLVSNYTQTLDVFEQLCRLRGYLFVRLDGSMSIKKRAKV 572
Query: 557 VETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
V++FN S EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK
Sbjct: 573 VDSFNNPNSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKR 632
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT 675
CF+YR L+TG+IEEK+ QRQAHKKALSSCVVD EEDV RHFS+ EL+ LF+ +E T+SDT
Sbjct: 633 CFIYRLLATGTIEEKIFQRQAHKKALSSCVVDNEEDVERHFSVDELKDLFRFKEGTLSDT 692
Query: 676 HDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA-GVSFVFYQ 734
HDK KC+RC+N IQV+ PP +SDC DLS W+H +KR + D +LK W VSFVF+
Sbjct: 693 HDKFKCNRCINNIQVRLPPNDSDCNSDLSQWNHCADKRGIEDQVLKGVWDTKNVSFVFHH 752
Query: 735 HS 736
S
Sbjct: 753 KS 754
>gi|321465306|gb|EFX76308.1| RAD54, DNA repair and recombination protein [Daphnia pulex]
Length = 748
Score = 942 bits (2436), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/704 (66%), Positives = 563/704 (79%), Gaps = 13/704 (1%)
Query: 37 RKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRR 96
RKPL E NS++ + S HE LI++I++KPFK+PI NY G S K+LG+RR
Sbjct: 47 RKPLAQCSLPVETNSEMAGS----SFHEELIKKIMSKPFKIPIPNYNGPTLS-KSLGMRR 101
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKID-KDKIQVHVVVDPVLSNILRPHQREGV 155
G R+ALHDP P AL+LY+PP+LSAHD LK DK VHVVVDPVL+ +LRPHQREGV
Sbjct: 102 AGVRQALHDPDEPGALILYSPPELSAHDKLKSSISDKHPVHVVVDPVLTKVLRPHQREGV 161
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSS 215
KFMY+CVTG+ IE+ YGCIMADEMGLGKTLQCITL+WTLL+QGP KPLI K IIV+PSS
Sbjct: 162 KFMYDCVTGLCIENNYGCIMADEMGLGKTLQCITLLWTLLKQGPDCKPLIAKGIIVSPSS 221
Query: 216 LVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
LVKNW NEI KWL GRV L ID GSK EID LN F+ T+GRR V P+L+ISYETFR H
Sbjct: 222 LVKNWQNEINKWLSGRVNTLVIDSGSKDEIDRNLNGFIHTHGRRVVTPVLIISYETFRLH 281
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
A LHK E+GLVLCDEGHRLKN E+QTYQAL+ L KRRVLLSGTPIQNDLLEYFSL+HF
Sbjct: 282 AHALHKGEIGLVLCDEGHRLKNSENQTYQALVALNCKRRVLLSGTPIQNDLLEYFSLLHF 341
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
VNQGILGTAQEF+K++ETPILRG+D+ A++ + K +L++L +VN+C+IRRTSALL+
Sbjct: 342 VNQGILGTAQEFKKRFETPILRGRDADATEETQKKGQTQLKELADLVNKCIIRRTSALLT 401
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN--TKLGMTALSSITSLKKL 453
KYLPVK E VVCIK++ +Q +Y ++ S+AV+ M+ +K MTAL++IT+LKKL
Sbjct: 402 KYLPVKIELVVCIKLSPVQASIYKKVVASEAVKSKMREANEKPSKSSMTALAAITNLKKL 461
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
C+HP+LV +K Q+G DGFE +++ P A++ KL ELS KL VLD +LA++K TT
Sbjct: 462 CSHPELVYEKCQSGVDGFEGTLSLFP----ATFDPRKLQTELSGKLCVLDCILAMVKSTT 517
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLS 572
+DKIVL+SNYTQTLDLFE+L ++R Y VRLDGSM+IKKRAK+VE FN S++F+F+LS
Sbjct: 518 NDKIVLISNYTQTLDLFEKLCRMRSYPCVRLDGSMSIKKRAKIVEHFNDPASSDFVFLLS 577
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF+YR LSTG+IEEK+
Sbjct: 578 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFIYRLLSTGTIEEKIF 637
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKP 692
QRQAHKKALSSCVVD E+DV RHFS+S+LR LF+LEE T SDTHDK KC RCVN IQVKP
Sbjct: 638 QRQAHKKALSSCVVDNEDDVERHFSLSDLRDLFKLEELTSSDTHDKFKCRRCVNRIQVKP 697
Query: 693 PPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
PP ++ C DLS W+H +++ + DP+LK W AGV+F F+Q S
Sbjct: 698 PPDDATCNSDLSQWNHCADRKTIPDPVLKSAWDAGVTFAFHQKS 741
>gi|41055574|ref|NP_957438.1| DNA repair and recombination protein RAD54-like [Danio rerio]
gi|28277973|gb|AAH46050.1| RAD54-like (S. cerevisiae) [Danio rerio]
Length = 738
Score = 941 bits (2432), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/753 (63%), Positives = 584/753 (77%), Gaps = 25/753 (3%)
Query: 1 RRSLAPSQLSKRSP-EDSPGIKTFPPPVK-KEKRSCTS------RKPLGSVDNEDEPNSK 52
RRSLAPSQ++KR DS + + P ++ + KR C RKPL + N
Sbjct: 2 RRSLAPSQVAKRKQGPDSDDEEDWEPDMEPQSKRDCREKYISPYRKPLTPLTNR------ 55
Query: 53 LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNAL 112
P+ + +EHE IR+IL+KPFK+PI NYTG +ALG+RR G RKALHDP AL
Sbjct: 56 -PVCADG-NEHEAFIRKILSKPFKIPIPNYTGV-LGLRALGLRRAGVRKALHDPFEDGAL 112
Query: 113 VLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYG 172
VLY PP +SAHDL+K DK+K+ VHVVVDPVLS +LRPHQREGVKF+++CVTG RIE++YG
Sbjct: 113 VLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYG 172
Query: 173 CIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRV 232
CIMADEMGLGKTLQCITL+WTLL+Q P KP IDK I+V+PSSLV+NW NE+ KWLGGRV
Sbjct: 173 CIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRV 232
Query: 233 AALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEG 292
+ IDGGSK EID+KL +F+ G R PIL+ISYETFR HA VLHK +VGLV+CDEG
Sbjct: 233 QPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEG 292
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
HRLKN ++QTY AL + A+RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+K++E
Sbjct: 293 HRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFE 352
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PIL+G+D+ ASD +R ++L++LI IVNRCLIRRTS +LSKYLPVK EQVVC +T
Sbjct: 353 IPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTP 412
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
LQKELY +K +++ G K+ +++LSSITSLKKLCNHP L+ +K TG +GF+
Sbjct: 413 LQKELYKLFLKQAKPVESLQTG---KISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFD 469
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
A+++ P Y+ + + +LS K++VLD +LA+ + TT DK+VLVSNYTQTLDLFE+
Sbjct: 470 GALDLFPQNYS----TKAVEPQLSGKMLVLDYILAMTRTTTSDKVVLVSNYTQTLDLFEK 525
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMF 591
L + R Y YVRLDG+M+IKKRAK+VE FN S+ EFIFMLSSKAGGCGLNLIGANRLVMF
Sbjct: 526 LCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMF 585
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK++QRQAHKKALSSCVVD E+D
Sbjct: 586 DPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQD 645
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTE 711
V RHFS+ ELR LF L E T+SDTHD+ +C RCVNG QV+PPP +SDCT DLS WHH +
Sbjct: 646 VERHFSLGELRELFSLNEKTLSDTHDRFRCRRCVNGRQVRPPPDDSDCTCDLSNWHHCAD 705
Query: 712 KRWLVDPILKHCWGAGVSFVFYQHSTKAEKSKV 744
KR L DP+L+ W A VSFVF+Q S + ++ V
Sbjct: 706 KRGLRDPVLQASWDAAVSFVFHQRSHEDQRGVV 738
>gi|158293531|ref|XP_557901.3| AGAP008748-PA [Anopheles gambiae str. PEST]
gi|157016752|gb|EAL40287.3| AGAP008748-PA [Anopheles gambiae str. PEST]
Length = 789
Score = 937 bits (2423), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/755 (61%), Positives = 566/755 (74%), Gaps = 16/755 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEM 60
R+SL P + + + SP K+ P +K +R C R P D+P P K +
Sbjct: 2 RKSLVPQRCTPSNAVHSP-FKS-PLSAQKRQRECRKRLP-DKGGTADQP----PTPKLSV 54
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
SEHE +I +IL +PFK+PI NY +ST+ LG++R AR+ALHDP A NALVL++PP+L
Sbjct: 55 SEHELMIMKILTQPFKIPIANYVPE-HSTRCLGMKRSAARRALHDPYACNALVLFSPPEL 113
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
+ HD LK+DK KIQVHVVVDP+L NILRPHQREGV+FMY+CVTG + D GCIMADEMG
Sbjct: 114 TEHDKLKMDKSKIQVHVVVDPLLGNILRPHQREGVRFMYDCVTGAK-GDFNGCIMADEMG 172
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQCITL+WTLLRQ P KP I+KAIIV PSSLVKNW E KWLG RV L IDGG
Sbjct: 173 LGKTLQCITLLWTLLRQSPDCKPTINKAIIVCPSSLVKNWYKEFGKWLGCRVNCLSIDGG 232
Query: 241 SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
SK + +L +M +R P+L+ISYETFR +A +L+ +EVG VLCDEGHRLKNCE+
Sbjct: 233 SKEQTTKELEQYMANQSQRHGTPVLIISYETFRLYAHILNSSEVGAVLCDEGHRLKNCEN 292
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
TYQALMGLK KRRVLLSGTPIQNDL EY+SL+HFVN G+LG+ EFRKQ+E PILRGQD
Sbjct: 293 LTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSTAEFRKQFENPILRGQD 352
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ ++DAER KA ERL++L +VNRC+IRRTSALL+KYLPVK E VVC++MT++Q LY +
Sbjct: 353 ANSTDAEREKAAERLQELAALVNRCMIRRTSALLTKYLPVKFEMVVCVRMTEVQAALYKS 412
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
++SD +RR++ TK +TALS+ITSLKKLCNHPDLV +KIQ ADGFENA ILP
Sbjct: 413 FLQSDTIRRSVMEKNATKASLTALSNITSLKKLCNHPDLVYEKIQERADGFENAATILPD 472
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
Y+ +L EL AKLM+LD MLA IK T DKIVLVSNYTQTLDLFE+L + RGY
Sbjct: 473 NYSPR----ELRPELGAKLMLLDCMLASIKTNTTDKIVLVSNYTQTLDLFEKLCRKRGYG 528
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
YVRLDG+MTIKKR KVV+ FN+ S +FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN
Sbjct: 529 YVRLDGTMTIKKRGKVVDQFNQPDSADFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 588
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D+QAMARVWRDGQKKPCF+YR L+TG+IEEK+ QRQ HKKALS+ VVD ED RHF+
Sbjct: 589 DEQAMARVWRDGQKKPCFIYRLLATGTIEEKIFQRQTHKKALSTTVVDNAEDGERHFTQD 648
Query: 660 ELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPI 719
+L+ LF+L+E T SDTHD +C RC NG+Q+K PP +SDC DL+ W+H + + D I
Sbjct: 649 DLKDLFKLDEQTRSDTHDIFRCKRCTNGVQMKLPPDDSDCMSDLAHWYHCANNKGIPDDI 708
Query: 720 LKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKE 752
L W VSFVF+ S A + + E+ ++
Sbjct: 709 LSKSWDITRCVSFVFHHRSNSAVVEQQLAEQRRQQ 743
>gi|327271091|ref|XP_003220321.1| PREDICTED: DNA repair and recombination protein RAD54-like [Anolis
carolinensis]
Length = 906
Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/753 (64%), Positives = 567/753 (75%), Gaps = 23/753 (3%)
Query: 1 RRSLAPSQLSKRSP-EDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNED-------EPNSK 52
RRSLAPSQL KR P EDSP + P KR +K G DN++ +P ++
Sbjct: 164 RRSLAPSQLGKRKPGEDSPEDEDDWHPKAIPKR----QKHGGKADNKECYISPFRKPLAQ 219
Query: 53 LPMTKE--EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
L + S+HE IR IL+KPFKVPI NYTG KALGV+R G R ALHDP
Sbjct: 220 LTNRSHCLDGSKHEAFIRSILSKPFKVPIPNYTGS-LGLKALGVKRAGVRHALHDPFEEG 278
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVLY PP LSAH+ LKIDK+K VHVVVDPVLS +LRPHQREGVKF++ECVTG RI +
Sbjct: 279 ALVLYEPPPLSAHEQLKIDKEKFPVHVVVDPVLSRVLRPHQREGVKFLWECVTGRRILGS 338
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
+GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKAI+V+PSSLVKNW NE+ KWLGG
Sbjct: 339 HGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAIVVSPSSLVKNWYNEVGKWLGG 398
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ L IDGGSK +ID KL FM G R +PIL+ISYETFR HA VL K VGLV+CD
Sbjct: 399 RIQPLAIDGGSKEDIDRKLAGFMNQRGLRVPSPILIISYETFRLHAEVLQKGNVGLVICD 458
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+K
Sbjct: 459 EGHRLKNSDNQTYQALYKLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKH 518
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E PIL+G+D+ AS+A R K ERL++LI IVNRCLIRRTS +LSKYLPVK EQVVC ++
Sbjct: 519 FEIPILKGRDADASEAGRHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRL 578
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T LQ ELY +K +K G K+ +++LSSITSLKKLCNHP L+ DK +G
Sbjct: 579 TPLQSELYKQFLKQAKPAEDLKEG---KISVSSLSSITSLKKLCNHPALIHDKCVEEEEG 635
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
F A+ + P GY+ L +LS K++VLD +LAV K T++DK+VLVSNYTQTLDLF
Sbjct: 636 FVGALKLFPPGYSTK----SLEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLDLF 691
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLV 589
E+L + R Y YVRLDG+M+IKKRAKVVE FN S+ EFIFMLSSKAGGCGLNLIGANRLV
Sbjct: 692 EKLCRNRRYLYVRLDGTMSIKKRAKVVEHFNSVSSPEFIFMLSSKAGGCGLNLIGANRLV 751
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ HKKALSSCVVD E
Sbjct: 752 MFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEE 811
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
+DV RHFS+ EL+ LF L E T SDTHDKIKC RCVNG QV+PPP SDCT DLS W+H
Sbjct: 812 QDVERHFSLGELKELFTLNETTTSDTHDKIKCRRCVNGHQVRPPPEGSDCTSDLSQWNHC 871
Query: 710 TEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKS 742
+KR L D +LK W A V+F F+ HS + ++
Sbjct: 872 ADKRGLQDTVLKAAWDAAVTFTFHHHSHEEQRG 904
>gi|410920762|ref|XP_003973852.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Takifugu rubripes]
Length = 915
Score = 933 bits (2412), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/728 (63%), Positives = 567/728 (77%), Gaps = 20/728 (2%)
Query: 30 EKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMSE------------HENLIRQILAKPFKV 77
E RS +S+K +ED N + +E +++ HE IR IL+KPFKV
Sbjct: 195 ENRSISSKKEKRQKSSEDSRNIHISPFREPLTQLNNRPEYLDSDKHEAFIRSILSKPFKV 254
Query: 78 PILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHV 137
PI NYTG +ALG++R G RKALHDP A +ALVLY PP LSAH+L+K DK+K+ VHV
Sbjct: 255 PIPNYTGA-LGARALGLKRAGVRKALHDPFADDALVLYEPPTLSAHELIKADKEKVPVHV 313
Query: 138 VVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQ 197
VVDPVL +LRPHQREGVKF++ECVTG RI +YGCIMADEMGLGKTLQCITL+WTLLRQ
Sbjct: 314 VVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEMGLGKTLQCITLIWTLLRQ 373
Query: 198 GPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYG 257
P KP IDK I+V+PSSLV+NW NE+ KWLGGRV L IDGGSK +ID +L +F+ YG
Sbjct: 374 SPDFKPEIDKVIVVSPSSLVRNWSNEVQKWLGGRVTPLAIDGGSKDDIDRQLVNFISQYG 433
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
R +PIL+ISYETFR HA+VLHK +VGLV+CDEGHRLKN ++QTYQAL + A+RRVL+
Sbjct: 434 LRVPSPILIISYETFRLHAAVLHKGKVGLVICDEGHRLKNSDNQTYQALNAMAAQRRVLI 493
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SGTPIQNDLLEYFSLVHFVN GILGTAQEF+K++E PIL+G+D+ A++ +R E+L +
Sbjct: 494 SGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGRDADANEKDRQAGEEKLTE 553
Query: 378 LIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
LI +VNRCLIRRTS +LSKYLPVK EQVVC ++T LQKELY ++ +++ E
Sbjct: 554 LISVVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQKELYQRFVRQAEPLDSLE--EGG 611
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
K+ ++ LSSITSLKKLCNHP L+ DK GA+GF+ A+++ P GY + + LS
Sbjct: 612 KMNVSTLSSITSLKKLCNHPALIYDKCVEGAEGFQGALDLFPPGYC----TKAVEPHLSG 667
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
K++VLD +LA+ K TTDDK+VLVSNYTQTLDLFE+L + R Y+YVRLDG+M+IKKRAK+V
Sbjct: 668 KMLVLDYILAITKTTTDDKVVLVSNYTQTLDLFEKLCRSRRYQYVRLDGTMSIKKRAKIV 727
Query: 558 ETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
E FN SN EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQ+K C
Sbjct: 728 ERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQRKTC 787
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
++YR L+TG+IEEK++QRQAHKKALSSCVVD E++V RHFS+ ELR LF L E+T+SDTH
Sbjct: 788 YIYRLLATGTIEEKILQRQAHKKALSSCVVDEEQNVERHFSLGELRELFSLNEDTVSDTH 847
Query: 677 DKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
DK +C RCVNG + +PP ++DCT DLS W+H +K+ L D +LK CW A VSFVF+Q S
Sbjct: 848 DKFRCRRCVNGREARPPAEDADCTSDLSQWNHCFDKKGLRDQVLKSCWDAAVSFVFHQRS 907
Query: 737 TKAEKSKV 744
+ +K V
Sbjct: 908 HEEQKGVV 915
>gi|449508575|ref|XP_002191829.2| PREDICTED: DNA repair and recombination protein RAD54-like
[Taeniopygia guttata]
Length = 745
Score = 931 bits (2406), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/757 (62%), Positives = 567/757 (74%), Gaps = 32/757 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKT---FPPPVKKEKRSCTS------------RKPLGSVDN 45
RRSLAPSQL+KR D + + PP ++++ + RKPL + N
Sbjct: 2 RRSLAPSQLAKRKAGDGDEEEEEEDWQPPTGRKRQKAAAETESGECYRSPFRKPLAQLTN 61
Query: 46 EDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD 105
P+ + S+HE IR IL+KPFKVPI NY G ++LGV+R G R LHD
Sbjct: 62 R--PHCL------DSSQHEAFIRSILSKPFKVPIPNYKGP-LGLRSLGVKRAGLRGPLHD 112
Query: 106 PTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
P ALVLY PP LSAHD LKIDKDK VHVVVDPVLS +LRPHQREGVKF+++CVT
Sbjct: 113 PFEEGALVLYEPPVLSAHDQLKIDKDKAPVHVVVDPVLSRVLRPHQREGVKFLWDCVTSR 172
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLV+NW NE+
Sbjct: 173 RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAVVVSPSSLVRNWYNEVE 232
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
KWLGGR+ L IDGGSK EID KL FM +G R +PIL+ISYETFR HA VL K VG
Sbjct: 233 KWLGGRIQPLAIDGGSKEEIDRKLVGFMSQHGVRVPSPILIISYETFRLHAEVLQKGSVG 292
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
LV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQ
Sbjct: 293 LVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQ 352
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EF++ +E PIL+G+D+ AS+AER K ERL++LI IVNRCLIRRTS +LSKYLPVK EQV
Sbjct: 353 EFKRHFEMPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQV 412
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
VC ++T LQ ELY N +K +K G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 VCCRLTPLQTELYKNFLKQAKPVEELKEG---KISVSSLSSITSLKKLCNHPALIYDKCV 469
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
+GF A+ + P+GY+ + + +LS K++VLD +LAV K T++DK+VLVSNYTQ
Sbjct: 470 EEEEGFMGALGLFPSGYS----TKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQ 525
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIG 584
TLDLFE+L + R Y YVRLDG+M+IKKRAK+VE FN S+ EFIFMLSSKAGGCGLNLIG
Sbjct: 526 TLDLFEKLCRSRRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIG 585
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ HKKALSSC
Sbjct: 586 ANRLVMFDPDWNPANDEQAMARVWRDGQKKMCYIYRLLSTGTIEEKIFQRQTHKKALSSC 645
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
VVD E+DV RHFS+ EL+ LF L E T SDTHDKIKC RCVNG QV+PPP SDCT DLS
Sbjct: 646 VVDEEQDVERHFSLGELKELFTLNETTTSDTHDKIKCHRCVNGHQVRPPPDGSDCTSDLS 705
Query: 705 CWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
WHH ++R L D +LK W A V+F F+ HS + ++
Sbjct: 706 QWHHCADRRGLQDSVLKAAWDAAVTFTFHHHSHEEQR 742
>gi|449266391|gb|EMC77444.1| DNA repair and recombination protein RAD54-like protein, partial
[Columba livia]
Length = 742
Score = 929 bits (2401), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/755 (63%), Positives = 564/755 (74%), Gaps = 30/755 (3%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKT--FPPPVKKEKRSCTS-----------RKPLGSVDNED 47
RRSLAPSQL+KR D + PP V + ++ + RKPL + N
Sbjct: 1 RRSLAPSQLAKRKAGDEEEEEEEWHPPTVSEGQKPVSETESGECYRSPFRKPLAQLTNR- 59
Query: 48 EPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPT 107
P+ + S+HE IR IL+KPFKVPI NY G +ALG++R G R LHDP
Sbjct: 60 -PHCL------DSSQHEAFIRSILSKPFKVPIPNYKGP-LGLRALGIKRAGLRSPLHDPF 111
Query: 108 APNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRI 167
ALVLY PP LSAHD LKIDKDK VHVVVDPVLS +LRPHQREGVKF+++CVT RI
Sbjct: 112 EEGALVLYEPPLLSAHDQLKIDKDKAPVHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRI 171
Query: 168 EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW 227
++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLV+NW NE+ KW
Sbjct: 172 PGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKW 231
Query: 228 LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
LGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR HA L K VGLV
Sbjct: 232 LGGRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSPILIISYETFRLHAEALQKGSVGLV 291
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF
Sbjct: 292 ICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEF 351
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
++ +E PIL+G+D+ AS+AER K ERL++LI IVNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 352 KRHFEIPILKGRDADASEAERHKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVC 411
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
++T LQ ELY N +K +K G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 412 CRLTPLQAELYKNFLKQAKPVEELKEG---KISVSSLSSITSLKKLCNHPALIHDKCVEE 468
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
+GF A+++ P GY+ + + +LS K++VLD +LAV K T++DK+VLVSNYTQTL
Sbjct: 469 EEGFMGALDLFPAGYS----TKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTL 524
Query: 528 DLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGAN 586
DLFE+L + R Y YVRLDG+M+IKKRAK+VE FN S+ EFIFMLSSKAGGCGLNLIGAN
Sbjct: 525 DLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGAN 584
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
RLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ HKKALSSCVV
Sbjct: 585 RLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVV 644
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCW 706
D E+DV RHFS+ EL+ LF L E T SDTHDKIKC RCVNG QV+PPP SDCT DLS W
Sbjct: 645 DEEQDVERHFSLGELKELFTLNETTTSDTHDKIKCRRCVNGHQVRPPPEGSDCTSDLSQW 704
Query: 707 HHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
+H +KR L D +LK W A V+F F+ HS + ++
Sbjct: 705 NHCADKRGLQDSVLKAAWDAAVTFAFHHHSHEEQR 739
>gi|410967175|ref|XP_003990097.1| PREDICTED: DNA repair and recombination protein RAD54-like [Felis
catus]
Length = 747
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/759 (61%), Positives = 562/759 (74%), Gaps = 34/759 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIK-----TFPPPVKKEKRSCTS---------RKPLGSVDNE 46
R+SLAPSQL+KR PE PG + T P K++ S T RKPL + N
Sbjct: 2 RKSLAPSQLAKRKPEGRPGDEEDWQPTTVTPKKQKSNSGTQSKECFLSPFRKPLTQLTNR 61
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
P S + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHDP
Sbjct: 62 --PPSL------DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHDP 112
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT R
Sbjct: 113 LEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRR 172
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
I ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ K
Sbjct: 173 IPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGK 232
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WL GR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H +L K VGL
Sbjct: 233 WLAGRIQPLAIDGGSKDEIDQKLEGFMNQRGTRVPSPILIISYETFRLHVGILQKGSVGL 292
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA E
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K +E PIL+ +D+ AS+A+R +RL +L IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 353 FKKHFELPILKSRDAAASEADRQLGEDRLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY ++ ++ G K+ +++LSSIT LKKLCNHP L+ DK
Sbjct: 413 CCRLTSLQTELYKKFLRQAKPAEELREG---KMSVSSLSSITLLKKLCNHPALIYDKCVE 469
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
GFE A+ I P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQT
Sbjct: 470 EEGGFEGALEIFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQT 525
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGA 585
LDLFE+L + R Y YVRLDG+M+IKKRAK+VE FN S +F+FMLSSKAGGCGLNLIGA
Sbjct: 526 LDLFEKLCRARRYLYVRLDGTMSIKKRAKIVERFNNPLSPDFVFMLSSKAGGCGLNLIGA 585
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCV
Sbjct: 586 NRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCV 645
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD E+DV RHFS+ EL+ LF L+E ++SDTHD+++C RCVN QV+PPP SDCT DL+
Sbjct: 646 VDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCCRCVNNHQVRPPPDGSDCTSDLAQ 705
Query: 706 WHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 706 WNHNTDKRGLKDEVLQAAWDAASTAITFVFHQQSHEEQR 744
>gi|345780848|ref|XP_532592.3| PREDICTED: DNA repair and recombination protein RAD54-like [Canis
lupus familiaris]
Length = 747
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/759 (61%), Positives = 561/759 (73%), Gaps = 34/759 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKT--FPPPVKKEKRSCTS------------RKPLGSVDNE 46
R+SLAPSQL+KR PE P P V +KR +S RKPL + N
Sbjct: 2 RKSLAPSQLAKRKPEGRPSDDEDWQPGTVTPKKRKSSSGTQSQECFLSPFRKPLTQLTNR 61
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
P S + S+HE IR IL+KPFK+PI NY G +ALG++R G R+ALHDP
Sbjct: 62 --PPSL------DSSQHEAFIRSILSKPFKIPIPNYQGP-LGFRALGLKRAGVRRALHDP 112
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
ALVLY PP LSAHD +K+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT R
Sbjct: 113 LEEGALVLYEPPPLSAHDQMKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRR 172
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
I ++GCIMADEMGLGKTLQCITL+WTLLRQ P KP IDKA++V+PSSLVKNW NE+ K
Sbjct: 173 IPGSHGCIMADEMGLGKTLQCITLIWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGK 232
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGL
Sbjct: 233 WLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGVRVPSPILIISYETFRLHVGVLQKGSVGL 292
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA E
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 353 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY +K ++ G K+ +++LSSIT LKKLCNHP L+ DK
Sbjct: 413 CCRLTPLQTELYKRFLKQAKPAEELREG---KMTVSSLSSITLLKKLCNHPALIYDKCVE 469
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
DGFE A+ I P Y+A L +LS K++VLD +LAV + + DK+VLVSNYTQT
Sbjct: 470 EEDGFEGALEIFPPTYSAK----ALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQT 525
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGA 585
LDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S +F+FMLSSKAGGCGLNLIGA
Sbjct: 526 LDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGA 585
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCV
Sbjct: 586 NRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCV 645
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD E+DV RHFS+ EL+ LF L+E ++SDTHD+++C RCVN QV+PPP SDCT DL+
Sbjct: 646 VDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNHQVRPPPDGSDCTSDLAQ 705
Query: 706 WHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 706 WNHNTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|260815483|ref|XP_002602502.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
gi|229287813|gb|EEN58514.1| hypothetical protein BRAFLDRAFT_281964 [Branchiostoma floridae]
Length = 700
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/709 (64%), Positives = 555/709 (78%), Gaps = 14/709 (1%)
Query: 37 RKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRR 96
R+PL + N+ S+ P + S HE IR IL+KPFK+PI NY G +LG+RR
Sbjct: 5 RRPLTPITNQ----SRFP----DSSSHEAFIRSILSKPFKIPIPNYKGPTLKG-SLGIRR 55
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
+G R+ALHDP ALVLY PPQLSA + LK+D +K VHVVVDPVL +LRPHQREGVK
Sbjct: 56 QGTRRALHDPEEEGALVLYHPPQLSAQEALKVDLEKHPVHVVVDPVLCCVLRPHQREGVK 115
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSL 216
FM++CVTG RI + GCIMADEMGLGKTLQCITL+WTLL+Q P AKP IDKAI+V PSSL
Sbjct: 116 FMWDCVTGERIPGSQGCIMADEMGLGKTLQCITLLWTLLKQSPDAKPTIDKAIVVTPSSL 175
Query: 217 VKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
VKNW NEI KWLG RV AL ID GSK +ID L+SFM GRR +PIL+ISYETFR HA
Sbjct: 176 VKNWYNEINKWLGTRVNALAIDSGSKDQIDRNLDSFMSQQGRRVSSPILIISYETFRLHA 235
Query: 277 SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
+VLH+ +GLV+CDEGHRLKNCE+ TYQAL GLK +RRVLLSGTPIQNDLLEYFSLVHFV
Sbjct: 236 AVLHRGPIGLVICDEGHRLKNCENLTYQALSGLKCRRRVLLSGTPIQNDLLEYFSLVHFV 295
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N GILGTAQEF+K++ETPILRG+D+ ASD ++ + E+L++L+ IV+RC+IRRT+++LSK
Sbjct: 296 NTGILGTAQEFKKRFETPILRGRDASASDKDQKRGEEKLKELLDIVDRCIIRRTASILSK 355
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
YLPVK EQVVC ++T LQ LY ++++S V+ + ++ K+ +A ++IT LKKLCNH
Sbjct: 356 YLPVKIEQVVCCRLTPLQTALYKHMVQSKLVQAQLDKSKSGKVTGSAFTAITQLKKLCNH 415
Query: 457 PDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
P L+ +K G +G + A+++ P Y+ + + ELS K++VLD +LA+ K T DK
Sbjct: 416 PSLIYEKCLEGDEGLDGALDLFPEKYSPKH----IQPELSGKMLVLDYILAMTKSKTSDK 471
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKA 575
+VLVSNYTQTLDLFE+L + RGY YVRLDGSMTIKKRAKVVE FN S+ EFIFMLSSKA
Sbjct: 472 VVLVSNYTQTLDLFEKLCRSRGYLYVRLDGSMTIKKRAKVVERFNNPSSPEFIFMLSSKA 531
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR L+TG+IEEK+ QRQ
Sbjct: 532 GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKQCYIYRLLATGTIEEKIFQRQ 591
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPL 695
AHKKALSSCVVD EEDV RHFS+ ELR LF L E+TISDTHDK KC RCVN IQV+PPP
Sbjct: 592 AHKKALSSCVVDQEEDVDRHFSLDELRDLFPLNEDTISDTHDKFKCRRCVNRIQVRPPPD 651
Query: 696 ESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKSKV 744
+SDC DLS WHH +KR L D +LK CW A V+F F+ S + ++ V
Sbjct: 652 DSDCNSDLSQWHHAADKRGLQDLMLKACWDAAVTFTFHHRSHEEQRGVV 700
>gi|395537346|ref|XP_003770664.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Sarcophilus harrisii]
Length = 822
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/749 (62%), Positives = 559/749 (74%), Gaps = 17/749 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKE-- 58
RRSLAPSQL+KR S + P +KR D P K P+T+
Sbjct: 80 RRSLAPSQLAKRKSAGSASDEEDWSPETPKKRKSGGGSEASGRDCFLSPFRK-PLTQLTN 138
Query: 59 -----EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
+ S+HE IR IL+KPFKVPI NY G +ALG++R G R ALHDP ALV
Sbjct: 139 RPVCLDSSQHEAFIRSILSKPFKVPIPNYQGP-LGLRALGIKRAGLRHALHDPFEEGALV 197
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
LY PP LSAHD LK+D++K+ VHVVVDP+LS ILRPHQREGVKF++ECVTG RI ++GC
Sbjct: 198 LYEPPPLSAHDQLKLDREKLPVHVVVDPILSKILRPHQREGVKFLWECVTGRRIPGSHGC 257
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQCITLMWTLLRQ P +KP IDKA++V+PSSLV+NW NE+ KWLGGR+
Sbjct: 258 IMADEMGLGKTLQCITLMWTLLRQSPESKPEIDKAVVVSPSSLVRNWSNEVHKWLGGRIQ 317
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
L IDGGSK EID KL SFM G R +PIL+ISYETFR HA L + VGLV+CDEGH
Sbjct: 318 PLAIDGGSKEEIDQKLGSFMNQRGSRVPSPILIISYETFRLHAEALQRGSVGLVICDEGH 377
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF++ +E
Sbjct: 378 RLKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFEL 437
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
PIL+G+D+ AS+A R K ERL +L+GIVNRCLIRRTS +LSKYLPVK EQVVC ++T L
Sbjct: 438 PILKGRDADASEAARQKGEERLRELVGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 497
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ +K +GF
Sbjct: 498 QAELYRRFLQQAKPAEELREG---KMSVSSLSSITSLKKLCNHPGLIYEKCVEEEEGFSG 554
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+++ P GY+ + +LS K++VLD +LAV + T+ DK+VLVSNYTQTLDLFE+L
Sbjct: 555 TLDLFPPGYSCK----SVEPQLSGKMLVLDYILAVTRRTSSDKVVLVSNYTQTLDLFEKL 610
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFD 592
+LR Y YVRLDG+M+IKKRAKVVE FN S+ +FIFMLSSKAGGCGLNLIGANRLVMFD
Sbjct: 611 CRLRRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFIFMLSSKAGGCGLNLIGANRLVMFD 670
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ HKKALSSCVVD E+DV
Sbjct: 671 PDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQTHKKALSSCVVDEEQDV 730
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
RHFS+ ELR LF L E T SDTHDK++C RCVNG QV+PPP SDCT DL+ WHH +K
Sbjct: 731 ERHFSLGELRELFTLNEVTPSDTHDKLRCRRCVNGRQVRPPPDGSDCTSDLAQWHHSADK 790
Query: 713 RWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
R L D +L W A V+F F+Q S + ++
Sbjct: 791 RGLSDEVLLAAWDAAVTFAFHQRSHEEQR 819
>gi|170041242|ref|XP_001848380.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167864826|gb|EDS28209.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 787
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/763 (61%), Positives = 561/763 (73%), Gaps = 39/763 (5%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPP---VKKEKRSCTSRKPLGSVDNEDEPNSKLPMT- 56
R+SLAPSQ S P F P K R C R NSKL T
Sbjct: 2 RKSLAPSQCS-------PANGAFKSPFLNAPKRPRECRER------------NSKLKDTG 42
Query: 57 -------KEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAP 109
K SE+E +I +IL +PFK+PI NY ++T+ LG++R AR++LHDP A
Sbjct: 43 GGGPSPPKLSASEYEMMITKILTRPFKIPIENYIPE-HTTRCLGMKRPPARRSLHDPYAC 101
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
NALVL+TP +LS HD LK D+ K QVHVVVDP+L NILRPHQREGV+FMYECVTG R D
Sbjct: 102 NALVLFTPQELSEHDKLKADQGKAQVHVVVDPLLGNILRPHQREGVRFMYECVTGKR-GD 160
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
GCIMADEMGLGKTLQCITL+WTLLRQ P KP I+KA+IV PSSLVKNW E KWLG
Sbjct: 161 FQGCIMADEMGLGKTLQCITLLWTLLRQSPDCKPEINKAVIVCPSSLVKNWYKEFGKWLG 220
Query: 230 GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLC 289
RV L IDGGSK + +L FM R P+L+ISYETFR +A +L+ +EVG VLC
Sbjct: 221 CRVNCLSIDGGSKEQTTKQLEQFMANQSARQGTPVLIISYETFRLYAGILNNSEVGAVLC 280
Query: 290 DEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRK 349
DEGHRLKNCE+ TYQALMGLK KRRVLLSGTPIQNDL EY+SL+HFVN G+LG++ EFR+
Sbjct: 281 DEGHRLKNCENLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGSSNEFRR 340
Query: 350 QYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIK 409
Q+E PILRGQD+ ++++ER KA ERL++L +VNRC+IRRTS+LL+KYLP+K E VVC+K
Sbjct: 341 QFENPILRGQDANSTESEREKATERLQELSALVNRCMIRRTSSLLTKYLPIKFEMVVCVK 400
Query: 410 MTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD 469
MTD+Q ELY + ++SD++RR++ K +TALS+IT+LKKLCNHPDLV +KI+ A+
Sbjct: 401 MTDVQTELYKSFLQSDSIRRSVLEKSEVKASLTALSNITALKKLCNHPDLVYEKIKERAE 460
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFE A ILP Y+A ++ E KLMVLD MLA IKM T+DKIVLVSNYTQTLDL
Sbjct: 461 GFEEAYKILPANYSAK----EVRPEFGGKLMVLDCMLASIKMNTNDKIVLVSNYTQTLDL 516
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FE+L + RGY YVRLDG+MTIKKR KVV+ FNK S EFIFMLSSKAGGCGLNLIGANRL
Sbjct: 517 FEKLCRKRGYGYVRLDGTMTIKKRGKVVDEFNKPDSKEFIFMLSSKAGGCGLNLIGANRL 576
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
VMFDPDWNPAND+QAMARVWRDGQKKPCF+YR L+TGSIEEK+ QRQ HKKALS+ VVD
Sbjct: 577 VMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQTHKKALSNTVVDN 636
Query: 649 EEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHH 708
+ED RHF+ +L+ LF+L+E TISDTH KC RCVN IQVK PP +SDCT DL+ W+H
Sbjct: 637 DEDGQRHFTQDDLKDLFRLDEATISDTHSIFKCKRCVNAIQVKLPPEDSDCTSDLAHWYH 696
Query: 709 VTEKRWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEE 749
+ + D IL W VSFVF+ S A + + E++
Sbjct: 697 CANNKGIPDDILSKSWDITKCVSFVFHHRSNSAVVEQQIAEQK 739
>gi|301768186|ref|XP_002919520.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Ailuropoda melanoleuca]
Length = 838
Score = 926 bits (2393), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/759 (61%), Positives = 562/759 (74%), Gaps = 34/759 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKT--FPPPVKKEKRSCTS------------RKPLGSVDNE 46
R+SLAPSQL+KR PE PG P V +KR +S RKPL + N
Sbjct: 93 RKSLAPSQLAKRKPEGRPGDDEDWQPGTVTPKKRKSSSGTQSQECFLSPFRKPLIQLTN- 151
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
+ P + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHDP
Sbjct: 152 -----RPPCL--DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHDP 203
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
ALVLY PP LSAHD LK+DK+K+ VHVVVDPVLS +LRPHQREGVKF++ECVT R
Sbjct: 204 LEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTSRR 263
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
+ ++GCIMADEMGLGKTLQCITLMWTLLRQ P +P IDKA++V+PSSLVKNW NE+ K
Sbjct: 264 VPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECRPEIDKAVVVSPSSLVKNWYNEVGK 323
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGL
Sbjct: 324 WLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGL 383
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN G+LGTA E
Sbjct: 384 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHE 443
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 444 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 503
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY ++ ++ G K+ +++LSSIT LKKLCNHP L+ DK
Sbjct: 504 CCRLTPLQTELYKRFLRQAKPAEELREG---KMSVSSLSSITLLKKLCNHPALIYDKCVE 560
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
DGFE A+ I P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQT
Sbjct: 561 EEDGFEGALEIFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQT 616
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGA 585
LDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S +F+FMLSSKAGGCGLNLIGA
Sbjct: 617 LDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGA 676
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCV
Sbjct: 677 NRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCV 736
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD E DV RHFS+ EL+ LF L+E ++SDTHD+++C RCVN QV+P P SDCT DL+
Sbjct: 737 VDEEPDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNHQVRPAPDGSDCTSDLAQ 796
Query: 706 WHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 797 WNHNTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 835
>gi|296207850|ref|XP_002750833.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Callithrix jacchus]
Length = 746
Score = 926 bits (2392), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/758 (61%), Positives = 567/758 (74%), Gaps = 33/758 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPP----PVKKEKRSCTS---------RKPLGSVDNED 47
RRSLAPSQL+KR PE + + P P K++ S T RKPL + N+
Sbjct: 2 RRSLAPSQLAKRKPEGRSSDEDWQPGLVTPRKRKSSSETRIQECFLSPFRKPLSQLTNQP 61
Query: 48 EPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPT 107
P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+ALHDP
Sbjct: 62 ------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRALHDPL 112
Query: 108 APNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRI 167
+ALVLY PP LSAHD LK+DK+K VHVVVDP+LS +LRPHQREGVKF++ECVT RI
Sbjct: 113 EKDALVLYEPPPLSAHDQLKLDKEKFPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRI 172
Query: 168 EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW 227
++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ KW
Sbjct: 173 PGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKW 232
Query: 228 LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
LGGR+ L IDGGSK +ID KL FM G R +PIL+ISYETFR H VL K VGLV
Sbjct: 233 LGGRIQPLAIDGGSKDDIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLV 292
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF
Sbjct: 293 ICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEF 352
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 353 KKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVC 412
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK G
Sbjct: 413 CRLTPLQTELYKRFLRQAKPAEELHEG---KMSVSSLSSITSLKKLCNHPALIHDKCVEG 469
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
DGFE A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQTL
Sbjct: 470 EDGFEGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTL 525
Query: 528 DLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGAN 586
DLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGAN
Sbjct: 526 DLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGAN 585
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
RLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVV
Sbjct: 586 RLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVV 645
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCW 706
D E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT DL+ W
Sbjct: 646 DEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAQW 705
Query: 707 HHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
+H T+KR L D +L+ W A V+FVF+Q S + ++
Sbjct: 706 NHCTDKRGLQDEVLQAAWDAASTAVTFVFHQRSHEEQR 743
>gi|432111345|gb|ELK34622.1| DNA repair and recombination protein RAD54-like protein [Myotis
davidii]
Length = 747
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/752 (62%), Positives = 570/752 (75%), Gaps = 20/752 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGI-KTFPPPV---KKEKRSCTSRKPLGSVDNEDEPNSKL--- 53
RRSLAPSQL+KR PE P + + P V KK K SC +R + + ++L
Sbjct: 2 RRSLAPSQLAKRKPEGRPSDDEDWQPGVVTPKKRKSSCETRSQECFLSPFRKALTQLTNR 61
Query: 54 PMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
P+ + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHDP ALV
Sbjct: 62 PLCLDS-SQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHDPLEEGALV 119
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
LY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF+++CVT RI ++GC
Sbjct: 120 LYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWDCVTSRRIPGSHGC 179
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ KWLGGR+
Sbjct: 180 IMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQ 239
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
L IDGGSK EID KL FM G R +PIL+ISYETFR HA VL K VGLV+CDEGH
Sbjct: 240 PLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHAGVLRKGSVGLVICDEGH 299
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA EF+K +E
Sbjct: 300 RLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFEL 359
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
PIL+G+D+ AS+AER ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC ++T L
Sbjct: 360 PILKGRDAAASEAERQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPL 419
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK DGFE
Sbjct: 420 QTELYQRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFEG 476
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
A++I P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQTLDLFE+L
Sbjct: 477 ALDIFPPGYS----SKVLEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKL 532
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFD 592
+ R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFD
Sbjct: 533 CRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFD 592
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E+DV
Sbjct: 593 PDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDV 652
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
RHFS+ EL+ LF L+E ++SDTHD+++C RCVN Q++PPP SDCT DL+ W+H T+K
Sbjct: 653 ERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNHQIRPPPDGSDCTSDLAQWNHSTDK 712
Query: 713 RWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
R L D +L+ W A ++FVF+Q S + ++
Sbjct: 713 RGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|118094595|ref|XP_422447.2| PREDICTED: DNA repair and recombination protein RAD54-like [Gallus
gallus]
Length = 804
Score = 922 bits (2384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/754 (63%), Positives = 565/754 (74%), Gaps = 29/754 (3%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS------------RKPLGSVDNEDE 48
RRSLAPSQL+KR + PP ++++ S RKPL + N
Sbjct: 64 RRSLAPSQLAKRKAGGEEEDGEWRPPATQKRQKAGSEAESADCYRSPFRKPLTQLTNR-- 121
Query: 49 PNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTA 108
P+ + S+HE IR IL+KPFKVPI NY G +ALG++R G R LHDP
Sbjct: 122 -----PLCLDS-SQHEAFIRSILSKPFKVPIPNYKGP-TGLRALGIKRAGLRSPLHDPFE 174
Query: 109 PNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
ALVLY PP LSAH+ LKIDKDK+ VHVVVDPVLS +LRPHQREGVKF+++CVT RI
Sbjct: 175 EGALVLYEPPLLSAHEQLKIDKDKVPVHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRIP 234
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL 228
++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLV+NW NE+ KWL
Sbjct: 235 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKWL 294
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVL 288
GGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR HA L K VGLV+
Sbjct: 295 GGRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSPILIISYETFRLHAEALQKGSVGLVI 354
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+
Sbjct: 355 CDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFK 414
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
+ +E PIL+G+D+ AS+AER K ERL++LI IVNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 415 RHFELPILKGRDADASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCC 474
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
++T LQ ELY N +K +K G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 475 RLTPLQAELYKNFLKQAKPVEELKEG---KINVSSLSSITSLKKLCNHPALIYDKCVEEE 531
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
+GF A+++ P GY+ + + +LS K++VLD +LAV K T++DK+VLVSNYTQTLD
Sbjct: 532 EGFMGALDLFPAGYS----TKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLD 587
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANR 587
LFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ EFIFMLSSKAGGCGLNLIGANR
Sbjct: 588 LFEKLCRNRRYLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNLIGANR 647
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ HKKALSSCVVD
Sbjct: 648 LVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 707
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWH 707
E+DV RHFS+ EL+ LF L E TISDTHDKIKC RCVNG QV+PPP SDCT DLS W+
Sbjct: 708 EEQDVERHFSLGELKELFSLNETTISDTHDKIKCRRCVNGHQVRPPPEGSDCTSDLSQWN 767
Query: 708 HVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
H +KR L D +LK W A V+F F+ HS + ++
Sbjct: 768 HCADKRGLQDSVLKAAWDAAVTFTFHHHSHEEQR 801
>gi|426215442|ref|XP_004001981.1| PREDICTED: DNA repair and recombination protein RAD54-like [Ovis
aries]
Length = 749
Score = 922 bits (2383), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/760 (61%), Positives = 566/760 (74%), Gaps = 35/760 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGI-KTFPP----PVKKEKRSCTS----------RKPLGSVDN 45
RRSLAPSQL+KR PED P + + P P K +K SC + RKPL + N
Sbjct: 2 RRSLAPSQLAKRKPEDGPSDDEDWQPGAVTPKKPKKSSCETQSQECFLSPFRKPLTQLTN 61
Query: 46 EDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD 105
+ P + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHD
Sbjct: 62 ------RPPCL--DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHD 112
Query: 106 PTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
P ALVLY PP LSAHD LK DK+K+ VHVVVDP+LS +LRPHQREGV+F+++CVTG
Sbjct: 113 PLEEGALVLYEPPPLSAHDQLKFDKEKLPVHVVVDPILSKVLRPHQREGVEFLWKCVTGR 172
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLV+NW NE+
Sbjct: 173 RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVG 232
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VG
Sbjct: 233 KWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVG 292
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
LV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQ
Sbjct: 293 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQ 352
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EF+K +E PIL+G+D+ AS+ +R ERL +L IVNRCLIRRTS +LSKYLPVK EQV
Sbjct: 353 EFKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQV 412
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
VC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 VCCRLTPLQIELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIYDKCV 469
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
DGFE ++I P G Y S L +LS K++VLD +LAV + + DK+VLVSNYTQ
Sbjct: 470 EEEDGFEGTLDIFPPG----YNSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQ 525
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIG 584
TLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIG
Sbjct: 526 TLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIG 585
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSC
Sbjct: 586 ANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSC 645
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
VVD E+DV RHFS+ EL+ LF L+E +SDTHD+++C RCVN QV PPP SDCT DL+
Sbjct: 646 VVDEEQDVERHFSLGELKELFTLDEANLSDTHDRLRCRRCVNNRQVWPPPDGSDCTSDLA 705
Query: 705 CWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVFYQ S + ++
Sbjct: 706 QWNHSTDKRGLKDEVLQAAWDAASTAITFVFYQRSHEEQR 745
>gi|403291754|ref|XP_003936932.1| PREDICTED: DNA repair and recombination protein RAD54-like [Saimiri
boliviensis boliviensis]
Length = 747
Score = 922 bits (2382), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/762 (61%), Positives = 567/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ + T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSSDDEDWQPGLVT---PRKRKSSNETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKFPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
AQEF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AQEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELHEG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEQEDGFEGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHCTDKRGLQDEVLQAAWDAASTAITFVFHQRSHEEQQ 744
>gi|326925324|ref|XP_003208867.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Meleagris gallopavo]
Length = 792
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/754 (62%), Positives = 564/754 (74%), Gaps = 29/754 (3%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS------------RKPLGSVDNEDE 48
RRSLAPSQL+KR + PP ++++ S RKPL + N
Sbjct: 52 RRSLAPSQLAKRKAGGEEEDSEWRPPATQKRQKAGSEAESGDCYRSPFRKPLTQLTNR-- 109
Query: 49 PNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTA 108
P+ + S+HE IR IL+KPFKVPI NY G +ALG++R G R LHDP
Sbjct: 110 -----PLCLDS-SQHEAFIRSILSKPFKVPIPNYKGP-TGLRALGIKRAGLRSPLHDPFE 162
Query: 109 PNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
ALVLY PP LSAH+ LKIDKDK+ VHVVVDPVLS +LRPHQREGVKF+++CVT RI
Sbjct: 163 EGALVLYEPPLLSAHEQLKIDKDKVPVHVVVDPVLSRVLRPHQREGVKFLWDCVTSRRIP 222
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL 228
++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLV+NW NE+ KWL
Sbjct: 223 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSLVRNWYNEVEKWL 282
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVL 288
GGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR HA L K VGLV+
Sbjct: 283 GGRIQPLAIDGGSKEEIDRKLVGFMNQRGLRVPSPILIISYETFRLHAEALQKGTVGLVI 342
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+
Sbjct: 343 CDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFK 402
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
+ +E PIL+G+D+ AS+AER K ERL++LI IVNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 403 RHFELPILKGRDADASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCC 462
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
++T LQ ELY N +K +K G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 463 RLTPLQAELYKNFLKQAKPVEELKEG---KINVSSLSSITSLKKLCNHPALIYDKCVEEE 519
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
+GF A+++ P GY+ + + +LS K++VLD +LAV K T++DK+VLVSNYTQTLD
Sbjct: 520 EGFMGALDLFPAGYS----TKSVEPQLSGKMLVLDYILAVTKSTSNDKVVLVSNYTQTLD 575
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANR 587
LFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ EFIFMLSSKAGGCGLNLIGANR
Sbjct: 576 LFEKLCRNRRYLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKAGGCGLNLIGANR 635
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ HKKALSSCVVD
Sbjct: 636 LVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 695
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWH 707
E+DV RHFS+ EL+ LF L E T SDTHDKIKC RCVNG QV+PPP SDCT DLS W+
Sbjct: 696 EEQDVERHFSLGELKELFALNETTTSDTHDKIKCRRCVNGHQVRPPPEGSDCTSDLSQWN 755
Query: 708 HVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
H +KR L D +LK W A V+F F+ HS + ++
Sbjct: 756 HSADKRGLQDSVLKAAWDAAVTFTFHHHSHEEQR 789
>gi|1495708|emb|CAA66380.1| RAD54 [Mus musculus]
Length = 747
Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 470/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL++R PED PG T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLARRKPEDRSSDDEDWQPGTVT---PKKRKSSSETQVQECFLSPFRKPLTQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N + P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 LN------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDPVLS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGN 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+ +D+ AS+A+R + ERL +LIGIVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE + I P G Y S + +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVAEEDGFEGTLGIFPPG----YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L ++R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 744
>gi|440907311|gb|ELR57471.1| DNA repair and recombination protein RAD54-like protein, partial
[Bos grunniens mutus]
Length = 749
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/760 (61%), Positives = 562/760 (73%), Gaps = 35/760 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPP-----VKKEKRSCTS----------RKPLGSVDN 45
RRSLAPSQL+KR PED P P K +K SC + RKPL + N
Sbjct: 2 RRSLAPSQLAKRKPEDGPSDDEDWQPGAVTSKKPKKSSCETQSQECFLSPFRKPLTQLTN 61
Query: 46 EDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD 105
+ P + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHD
Sbjct: 62 ------RPPCL--DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHD 112
Query: 106 PTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
P ALVLY PP LSAHD LK DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 113 PLEEGALVLYEPPPLSAHDQLKFDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR 172
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLV+NW NE+
Sbjct: 173 RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVG 232
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VG
Sbjct: 233 KWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVG 292
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
LV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQ
Sbjct: 293 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQ 352
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EF+K +E PIL+G+D+ AS+ +R ERL +L IVNRCLIRRTS +LSKYLPVK EQV
Sbjct: 353 EFKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQV 412
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
VC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 VCCRLTPLQIELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIYDKCV 469
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
DGFE ++I P G Y S L +LS K++VLD +LAV + + DK+VLVSNYTQ
Sbjct: 470 EEEDGFEGTLDIFPPG----YNSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQ 525
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIG 584
TLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIG
Sbjct: 526 TLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIG 585
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSC
Sbjct: 586 ANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSC 645
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
VVD E+DV RHFS+ EL+ LF L+E +SDTHD+++C RCVN QV PPP SDCT DL+
Sbjct: 646 VVDEEQDVERHFSLGELKELFTLDEAKLSDTHDRLRCRRCVNNHQVWPPPDGSDCTSDLA 705
Query: 705 CWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 706 QWNHSTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 745
>gi|171906595|ref|NP_033041.3| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|171906597|ref|NP_001116430.1| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|171906599|ref|NP_001116431.1| DNA repair and recombination protein RAD54-like [Mus musculus]
gi|51316197|sp|P70270.2|RAD54_MOUSE RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=RAD54 homolog; Short=mHR54; Short=mRAD54
gi|148698674|gb|EDL30621.1| RAD54 like (S. cerevisiae) [Mus musculus]
Length = 747
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL++R PED PG T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLARRKPEDRSSDDEDWQPGTVT---PKKRKSSSETQVQECFLSPFRKPLTQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N + P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 LN------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGN 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+ +D+ AS+A+R + ERL +LIGIVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE + I P G Y S + +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVAEEDGFEGTLGIFPPG----YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L ++R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 744
>gi|26353994|dbj|BAC40627.1| unnamed protein product [Mus musculus]
Length = 747
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL++R PED PG T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLARRKPEDRSSDDEDWQPGTVT---PKKRKSSSETQVQECFLSPFRKPLTQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N + P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 LN------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGN 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+ +D+ AS+A+R + ERL +LIGIVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE + I P G Y S + +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVAEEDGFEGTLGIFPPG----YNSKAVEPQLSGKMLVLDYVLAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L ++R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 744
>gi|195539537|ref|NP_001124238.1| DNA repair and recombination protein RAD54-like [Bos taurus]
gi|119935983|gb|ABM06051.1| RAD54-like protein [Bos taurus]
gi|296488837|tpg|DAA30950.1| TPA: RAD54-like [Bos taurus]
Length = 749
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/760 (61%), Positives = 562/760 (73%), Gaps = 35/760 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPP-----VKKEKRSCTS----------RKPLGSVDN 45
RRSLAPSQL+KR PED P P K +K SC + RKPL + N
Sbjct: 2 RRSLAPSQLAKRKPEDGPSDDEDWQPGAVTSKKPKKSSCETQSQECFLSPFRKPLTQLTN 61
Query: 46 EDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD 105
+ P + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHD
Sbjct: 62 ------RPPCL--DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHD 112
Query: 106 PTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
P ALVLY PP LSAHD LK DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 113 PLEEGALVLYEPPPLSAHDQLKFDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR 172
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLV+NW NE+
Sbjct: 173 RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVRNWYNEVG 232
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VG
Sbjct: 233 KWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVG 292
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
LV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQ
Sbjct: 293 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQ 352
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EF+K +E PIL+G+D+ AS+ +R ERL +L IVNRCLIRRTS +LSKYLPVK EQV
Sbjct: 353 EFKKHFELPILKGRDAAASEEDRRVGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQV 412
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
VC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 VCCRLTPLQIELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIYDKCV 469
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
DGFE ++I P G Y S L +LS K++VLD +LAV + + DK+VLVSNYTQ
Sbjct: 470 EEEDGFEGTLDIFPPG----YNSKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQ 525
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIG 584
TLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIG
Sbjct: 526 TLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIG 585
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSC
Sbjct: 586 ANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSC 645
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
VVD E+DV RHFS+ EL+ LF L+E +SDTHD+++C RCVN QV PPP SDCT DL+
Sbjct: 646 VVDEEQDVERHFSLGELKELFTLDEAKLSDTHDRLRCRRCVNNHQVWPPPDGSDCTSDLA 705
Query: 705 CWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 706 QWNHSTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 745
>gi|20987234|gb|AAH21643.1| RAD54 like (S. cerevisiae) [Mus musculus]
Length = 747
Score = 919 bits (2375), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL++R PED PG T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLARRKPEDRSSDDEDWQPGTVT---PKKRKSSSETQVQECFLSPFRKPLTQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N + P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 LN------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRVGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGN 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+ +D+ AS+A+R + ERL +LIGIVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE + I P G Y S + +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVAEEDGFEGTLGIFPPG----YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L ++R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 744
>gi|291398984|ref|XP_002715711.1| PREDICTED: RAD54-like protein [Oryctolagus cuniculus]
Length = 755
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/757 (62%), Positives = 563/757 (74%), Gaps = 34/757 (4%)
Query: 3 SLAPSQLSKRSPEDS-PGIKTFPP----PVKKEKRSCTS---------RKPLGSVDNEDE 48
SLAPSQL+KR PE P + P P K++ RS + RKPL + D
Sbjct: 12 SLAPSQLAKRKPEGRCPDDADWQPETVTPKKQKSRSESQMQECFLSPFRKPLTQL--TDR 69
Query: 49 PNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTA 108
P + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHDP
Sbjct: 70 PPCL------DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGIRRALHDPLE 122
Query: 109 PNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
ALVLY PP LSAHD LK+DK+K+ VHVVVDPVLS +LRPHQREGVKF++ECVT RI
Sbjct: 123 EGALVLYEPPLLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTSRRIP 182
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL 228
++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ KWL
Sbjct: 183 GSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGKWL 242
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVL 288
GGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGLV+
Sbjct: 243 GGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVI 302
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
CDEGHRLKN E+QTYQAL L +RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+
Sbjct: 303 CDEGHRLKNSENQTYQALDSLNTRRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFK 362
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
K +E PIL+ +D+ AS+A+R ERL +L G+VNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 363 KHFELPILKSRDAAASEADRQLGEERLRELTGVVNRCLIRRTSDILSKYLPVKIEQVVCC 422
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 423 RLTPLQTELYKRFLRQAKPAEELHEG---KMSVSSLSSITSLKKLCNHPALIYDKCVEEE 479
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
DGFE A++I P G Y S + +LS K++VLD +LAV + + DK+VLVSNYTQTLD
Sbjct: 480 DGFEGALDIFPPG----YNSKAIEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLD 535
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANR 587
LFE+L + R Y YVRLDG+M+IKKRAKVVE FN TS +F+FMLSSKAGGCGLNLIGANR
Sbjct: 536 LFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPTSPDFVFMLSSKAGGCGLNLIGANR 595
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD
Sbjct: 596 LVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVD 655
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWH 707
E+DV RHFS+ EL+ LF LEE ++SDTHDK+ C RCVN QV PPP SDCT DL+ W+
Sbjct: 656 EEQDVERHFSLGELKELFTLEEASLSDTHDKLHCRRCVNSRQVWPPPDGSDCTSDLAQWN 715
Query: 708 HVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
H T+KR L D +L+ W A +SFVF+Q S + ++
Sbjct: 716 HSTDKRGLQDEVLQAAWDAASTAISFVFHQRSHEEQR 752
>gi|1495483|emb|CAA66379.1| RAD54 [Homo sapiens]
Length = 747
Score = 918 bits (2373), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+QHS + ++
Sbjct: 703 LAGWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQHSHEEQR 744
>gi|256080936|ref|XP_002576731.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
gi|360045008|emb|CCD82556.1| DNA repair and recombination protein rad54-related [Schistosoma
mansoni]
Length = 832
Score = 918 bits (2372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/724 (62%), Positives = 539/724 (74%), Gaps = 42/724 (5%)
Query: 63 HENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSA 122
HENLIR IL+KPF+VPI+NY G + LGVRR +R ALHDP +ALVLY+PP+++A
Sbjct: 109 HENLIRNILSKPFRVPIINYNGSSNDVRVLGVRRNTSRVALHDPFEEDALVLYSPPEVTA 168
Query: 123 HDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLG 182
HD LK + K VHVVVDP+LS ILRPHQREGVKFMY+CVTGV+I + +GCIMADEMGLG
Sbjct: 169 HDALKQEATKKLVHVVVDPMLSKILRPHQREGVKFMYDCVTGVQIPNNHGCIMADEMGLG 228
Query: 183 KTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSK 242
KTLQCITL+WTLLRQGP KP+IDKA+IV PSSL++NW NE KWL G++ L ID GSK
Sbjct: 229 KTLQCITLIWTLLRQGPEGKPIIDKAVIVTPSSLLRNWYNEFQKWLHGKIHPLAIDSGSK 288
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
+ID+KL F+ GRR +PIL+ISYETFR HASVLHK VGLVLCDEGHRLKN E+QT
Sbjct: 289 EDIDSKLAGFLSQAGRRIPSPILIISYETFRLHASVLHKGSVGLVLCDEGHRLKNSENQT 348
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
YQAL+ LK RRVLLSGTPIQNDLLEYFSLVHFVN G+LGTA EFR+ YE PILRG+D+
Sbjct: 349 YQALVQLKCPRRVLLSGTPIQNDLLEYFSLVHFVNMGLLGTASEFRRHYEIPILRGRDAD 408
Query: 363 ASDAERTKANERL----------EQLIGIVNRCLIRRTSALLSKYLPVK----------- 401
A++ ++ K E L E+L+GIV RC+IRRT ALL+KYLPVK
Sbjct: 409 ATNEDQKKGEEILQEYNCYLIPFEKLLGIVTRCIIRRTQALLTKYLPVKMITYTLVVFYW 468
Query: 402 -------------TEQVVCIKMTDLQKELYTNLIKSDAVRRTMK-----GGENTKLGMTA 443
EQVVC + Q+E+Y++ +K A ++K G N KL +++
Sbjct: 469 LYTLFSPLLFSVSVEQVVCCNLVGSQREVYSDFVKRMAREVSLKMNIADGLRNDKLSISS 528
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS-GKLLIELSAKLMVL 502
L+SIT LKKLCNHPDLV +K+ DGF NA++ P Y S +S + ELS K VL
Sbjct: 529 LASITHLKKLCNHPDLVYEKMTANTDGFHNALSYFPANYQGSLESNASVKPELSGKFQVL 588
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D +LAVIK TT DK+VL+SNYTQTLDLFERL RGY +VRLDG+MTIKKRAKVVE FN
Sbjct: 589 DCLLAVIKSTTSDKVVLISNYTQTLDLFERLCLQRGYNFVRLDGTMTIKKRAKVVEQFND 648
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
TS +F+FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK C++YR
Sbjct: 649 PTSRDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKQCYIYRL 708
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+STG+IEEKM+QRQAHKKALSSCVVD +E+V RHFS+ +LR LF T+SDTHD+ KC
Sbjct: 709 ISTGTIEEKMLQRQAHKKALSSCVVDQQEEVERHFSLDDLRELFMYHSETLSDTHDRFKC 768
Query: 682 SRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAG-VSFVFYQHSTKAE 740
RCVN +Q+KP P +DC D S W+H K+ L DP+LK W G +SFVF+ +S + +
Sbjct: 769 RRCVNSVQIKPAPEGTDCNSDFSQWNHCYTKKALNDPVLKATWDTGCISFVFWHYSHEEQ 828
Query: 741 KSKV 744
+ V
Sbjct: 829 RKTV 832
>gi|402854403|ref|XP_003891859.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Papio anubis]
Length = 747
Score = 917 bits (2370), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPEDS--------PGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGGSSKDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIHDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D + + W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHCTDKRGLQDEVXQAAWDAASTAITFVFHQRSHEEQR 744
>gi|178056748|ref|NP_001116655.1| DNA repair and recombination protein RAD54-like [Sus scrofa]
gi|168084900|dbj|BAG09488.1| DNA repair protein RAD54 [Sus scrofa]
Length = 747
Score = 916 bits (2368), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/759 (61%), Positives = 563/759 (74%), Gaps = 34/759 (4%)
Query: 1 RRSLAPSQLSKRSPEDSP--GIKTFPPPVKKEKRSCTS------------RKPLGSVDNE 46
RRSLAPSQL+KR PE P G P +KR +S RKPL + N+
Sbjct: 2 RRSLAPSQLAKRKPEVRPSDGEDWQPGAATPKKRKASSETQSQECFLSPFRKPLIQLTNQ 61
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
P + S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHDP
Sbjct: 62 P------PCL--DSSQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHDP 112
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
ALVLY PP LSAHD LK+DK+K+ VHVVVDPVLS +LRPHQREGV+F++ECVT R
Sbjct: 113 LEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVRFLWECVTSRR 172
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
I ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ K
Sbjct: 173 IPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIDKAVVVSPSSLVKNWYNEVGK 232
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGL
Sbjct: 233 WLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGL 292
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN G+LGTA E
Sbjct: 293 VICDEGHRLKNSENQTYQALNSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHE 352
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K++E PIL+G+D+ AS+ +R ERL +L IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 353 FKKRFELPILKGRDAAASEEDRRLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 CCRLTPLQTELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIYDKCVE 469
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
DGF A++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQT
Sbjct: 470 EEDGFAGALDFFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQT 525
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGA 585
LDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGA
Sbjct: 526 LDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGA 585
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCV
Sbjct: 586 NRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCV 645
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD E+DV RHFS+ EL+ LF L+E ++SDTHD+++C RCVN QV PPP SDCT DL+
Sbjct: 646 VDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNNQQVWPPPDGSDCTSDLAQ 705
Query: 706 WHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 706 WNHSTDKRGLADEVLQAAWHAASTAITFVFHQRSHEEQR 744
>gi|348553527|ref|XP_003462578.1| PREDICTED: DNA repair and recombination protein RAD54 [Cavia
porcellus]
Length = 750
Score = 916 bits (2367), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/759 (61%), Positives = 564/759 (74%), Gaps = 34/759 (4%)
Query: 1 RRSLAPSQLSKRSPE--DSPGIKTFPPPVKKEKRSCTS------------RKPLGSVDNE 46
RRSLAPSQL+KR E S P + +KR +S RKPL + N
Sbjct: 4 RRSLAPSQLAKRKSEGRSSDDEDWQPETMTPKKRKSSSETPIQECFLSPFRKPLTQLTN- 62
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+ALHDP
Sbjct: 63 -----RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRALHDP 114
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
ALVLY PP LSAHD LK+DK+K VHVVVDPVLS +LRPHQREGVKF++ECVT R
Sbjct: 115 LEEGALVLYEPPPLSAHDQLKLDKEKFPVHVVVDPVLSKVLRPHQREGVKFLWECVTSRR 174
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
I ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ K
Sbjct: 175 IPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGK 234
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGL
Sbjct: 235 WLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGL 294
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQE
Sbjct: 295 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQE 354
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K +E PIL+ +D+ AS+A+R ERL++LI IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 355 FKKHFELPILKSRDANASEADRQLGEERLQELISIVNRCLIRRTSDILSKYLPVKIEQVV 414
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 415 CCRLTSLQTELYKKFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPGLIYDKCVE 471
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
DGFE A++I P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQT
Sbjct: 472 EEDGFEGALDIFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQT 527
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGA 585
LDLFE+L + R Y YVRLDG+M+IKKRAK+VE FN S+ EF+FMLSSKAGGCGLNLIGA
Sbjct: 528 LDLFEKLCRARRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFVFMLSSKAGGCGLNLIGA 587
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCV
Sbjct: 588 NRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCV 647
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD E++V RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT DL+
Sbjct: 648 VDEEQNVERHFSLGELKELFTLDETSLSDTHDRLHCRRCVNSRQVWPPPDGSDCTSDLAQ 707
Query: 706 WHHVTEKRWLVDPILKHCWGAG---VSFVFYQHSTKAEK 741
W+H T+K+ L D +L+ W A ++FVF+Q S + ++
Sbjct: 708 WNHNTDKQGLQDEVLQAAWDAASTSITFVFHQRSHEEQR 746
>gi|47575794|ref|NP_001001241.1| RAD54-like [Xenopus (Silurana) tropicalis]
gi|45708870|gb|AAH67986.1| RAD54-like (S. cerevisiae) [Xenopus (Silurana) tropicalis]
Length = 742
Score = 915 bits (2366), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/754 (62%), Positives = 569/754 (75%), Gaps = 29/754 (3%)
Query: 1 RRSLAPSQLSKR----SPEDSPGIKTFPPPVKK--------EKRSCTSRKPLGSVDNEDE 48
RRSLAPSQL+KR S ED + P K+ E RKPL V N
Sbjct: 2 RRSLAPSQLAKRKQGSSSEDEEWCEDAVPKRKRLSSNKDIRENWISPFRKPLAQVTNRP- 60
Query: 49 PNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTA 108
T + +HE IR IL+KPFK+PI NY GG +ALG+++ G R+ALHDP
Sbjct: 61 -------TCLDSKQHEAFIRSILSKPFKIPIPNYQGG-LGLRALGIKKAGIRRALHDPFE 112
Query: 109 PNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
ALVLY PPQLSAHDLLK+DK+K+ VHVVVDPVL +LRPHQREGVKF++ECVTG RI
Sbjct: 113 EGALVLYEPPQLSAHDLLKVDKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIS 172
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL 228
++G IMADEMGLGKTLQCITL+WTLLRQ P AKP I+KA++V PSSLVKNW NE++KWL
Sbjct: 173 GSHGSIMADEMGLGKTLQCITLIWTLLRQSPDAKPEIEKAVVVCPSSLVKNWYNEVSKWL 232
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVL 288
GGR+ L IDGGSK EID KL+ FM +G R + IL+ISYETFR HA VLH+ VGLV+
Sbjct: 233 GGRIQPLAIDGGSKEEIDKKLSGFMNQHGMRVPSAILIISYETFRLHAEVLHRGSVGLVI 292
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+
Sbjct: 293 CDEGHRLKNSENQTYQALNSLNTVRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFK 352
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
K++E PIL+G+D+ AS A+R K E+L++LIG+VNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 353 KRFEIPILKGRDADASAADRQKGEEKLKELIGVVNRCLIRRTSDILSKYLPVKIEQVVCC 412
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
++T LQ ELY +K + G K+ +++LSSITSLKKLCNHP L+ +K
Sbjct: 413 RLTPLQSELYKLFLKQAKPAEDLNEG---KISVSSLSSITSLKKLCNHPSLIYEKCVEEE 469
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
+GF+ A+N+ P+GY+ + + +LS K++VLD +LAV + T+ DK+VLVSNYTQTLD
Sbjct: 470 EGFQGALNLFPSGYS----TKSVEPQLSGKMLVLDYILAVTRSTSSDKVVLVSNYTQTLD 525
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANR 587
LFE+L + R Y YVRLDG+M+IKKRAK+VE FN S+ EFIFMLSSKAGGCGLNLIGANR
Sbjct: 526 LFEKLCRTRRYLYVRLDGTMSIKKRAKIVERFNSPSSPEFIFMLSSKAGGCGLNLIGANR 585
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LVMFDPDWNPAND+QAMARVWRDGQKK CF+YR LSTG+IEEK+ QRQ HKKALSSCVVD
Sbjct: 586 LVMFDPDWNPANDEQAMARVWRDGQKKTCFIYRLLSTGTIEEKIFQRQTHKKALSSCVVD 645
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWH 707
E+DV RHFS+ EL+ LF L ENT SDTHDK KC RCVNG QV+PPP +DCT DLS W+
Sbjct: 646 EEQDVERHFSIGELKELFILNENTTSDTHDKFKCRRCVNGHQVRPPPDGTDCTSDLSQWN 705
Query: 708 HVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
H +KR L DP+L W A ++F F+ S + ++
Sbjct: 706 HCADKRGLQDPVLVSAWDAAITFTFHHQSHEEQR 739
>gi|426329478|ref|XP_004025767.1| PREDICTED: DNA repair and recombination protein RAD54-like [Gorilla
gorilla gorilla]
Length = 747
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIHDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN +S++F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSSDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|216548186|ref|NP_003570.2| DNA repair and recombination protein RAD54-like [Homo sapiens]
gi|216548193|ref|NP_001136020.1| DNA repair and recombination protein RAD54-like [Homo sapiens]
gi|51316508|sp|Q92698.2|RAD54_HUMAN RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=RAD54 homolog; Short=hHR54; Short=hRAD54
gi|47777671|gb|AAT38113.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|111307699|gb|AAI21061.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|111309424|gb|AAI21060.1| RAD54-like (S. cerevisiae) [Homo sapiens]
gi|119627335|gb|EAX06930.1| RAD54-like (S. cerevisiae), isoform CRA_b [Homo sapiens]
Length = 747
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/762 (61%), Positives = 565/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAGWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|410261060|gb|JAA18496.1| RAD54-like [Pan troglodytes]
gi|410351929|gb|JAA42568.1| RAD54-like [Pan troglodytes]
Length = 747
Score = 914 bits (2363), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/762 (61%), Positives = 565/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIHDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|338721715|ref|XP_001915622.2| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Equus caballus]
Length = 763
Score = 914 bits (2362), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/768 (60%), Positives = 562/768 (73%), Gaps = 52/768 (6%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKT---------------FPPPVKKEKRSCTSR 37
RRSLAPSQL+KR PE PG T F P +K T+R
Sbjct: 10 RRSLAPSQLAKRKPEGRAFDDEDWQPGAVTPKKRKSSSETQSQESFLSPFRKALTQLTNR 69
Query: 38 KPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRRE 97
P +D+ S+HE IR IL+KPFK+PI NY G ++ALG++R
Sbjct: 70 PP--CLDS---------------SQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRA 111
Query: 98 GARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKF 157
G R+ALHDP AL+LY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF
Sbjct: 112 GVRRALHDPLDEGALILYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKF 171
Query: 158 MYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLV 217
++ECVT RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLV
Sbjct: 172 LWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLV 231
Query: 218 KNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHAS 277
KNW NE+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H
Sbjct: 232 KNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVG 291
Query: 278 VLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
VL K VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN
Sbjct: 292 VLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVN 351
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
GILGTA EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKY
Sbjct: 352 SGILGTAHEFKKHFELPILKGRDAAASEADRHLGEERLRELTSIVNRCLIRRTSDILSKY 411
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LPVK EQVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP
Sbjct: 412 LPVKIEQVVCCRLTPLQNELYKKFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHP 468
Query: 458 DLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
L+ DK DGFE A++I P GY+ S L +LS K++VLD +LAV + +DK+
Sbjct: 469 ALIYDKCVEEEDGFEGALDIFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRGNDKV 524
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAG 576
VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S +F+FMLSSKAG
Sbjct: 525 VLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAG 584
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+
Sbjct: 585 GCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQS 644
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD+++C RCVN QV+PPP
Sbjct: 645 HKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNSHQVRPPPDG 704
Query: 697 SDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
SDCT DL+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 705 SDCTSDLAQWNHSTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 752
>gi|397483209|ref|XP_003812796.1| PREDICTED: DNA repair and recombination protein RAD54-like [Pan
paniscus]
Length = 747
Score = 914 bits (2361), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/762 (61%), Positives = 565/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIHDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSHQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|344287342|ref|XP_003415412.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Loxodonta africana]
Length = 794
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/765 (62%), Positives = 566/765 (73%), Gaps = 46/765 (6%)
Query: 1 RRSLAPSQLSKRSP-------ED-SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR P ED PG T P K++ S T RKPL +
Sbjct: 49 RRSLAPSQLAKRKPGGKSSDDEDWQPGAVT---PKKRKSSSATQSQACFLSPFRKPLTQL 105
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N + P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 106 TN------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRTGVRRAL 156
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 157 HDPLEEGALVLYEPPLLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 216
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI +YGCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 217 SRRIPGSYGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 276
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 277 VGKWLGGRIQPLAIDGGSKDEIDQKLERFMNQRGARVPSPILIISYETFRLHVGVLQKGS 336
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 337 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 396
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +LI IVNRCLIRRTS +LSKYLPVK E
Sbjct: 397 AHEFKKHFELPILKGRDAAASEADRHLGEERLRELISIVNRCLIRRTSDILSKYLPVKIE 456
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE---NTKLGMTALSSITSLKKLCNHPDLV 460
QVVC ++T LQ ELY + R K E K+ +++LSSITSLKKLCNHP L+
Sbjct: 457 QVVCCRLTPLQMELYKRFL------RQAKPAEELCEAKMSVSSLSSITSLKKLCNHPALI 510
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
DK DGFE A++I P GY+ S L +LS K++VLD +LAV + ++DK+VLV
Sbjct: 511 YDKCVEEEDGFEGALDIFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSNDKVVLV 566
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCG 579
SNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN +S +F+FMLSSKAGGCG
Sbjct: 567 SNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSLSSPDFVFMLSSKAGGCG 626
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
LNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKK
Sbjct: 627 LNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKK 686
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDC 699
ALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDC
Sbjct: 687 ALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDC 746
Query: 700 TDDLSCWHHVTEKRWLVDPILK---HCWGAGVSFVFYQHSTKAEK 741
T DL+ W+H T+KR L D +L+ A ++FVF+Q S + ++
Sbjct: 747 TSDLAQWNHSTDKRGLQDEVLQAAWDAASAAITFVFHQRSHEEQR 791
>gi|158258659|dbj|BAF85300.1| unnamed protein product [Homo sapiens]
Length = 747
Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/762 (61%), Positives = 564/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ L L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELLILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAGWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|156369786|ref|XP_001628155.1| predicted protein [Nematostella vectensis]
gi|156215124|gb|EDO36092.1| predicted protein [Nematostella vectensis]
Length = 756
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/753 (60%), Positives = 549/753 (72%), Gaps = 27/753 (3%)
Query: 1 RRSLAPSQLSKRSPEDSPGI-KTFPPPVKKEKRSCT----SRKPLGSVDNEDEPNSKLPM 55
RRS APSQL KR D + P ++ E S RKPL + P+
Sbjct: 7 RRSCAPSQLMKRKQNDEDACSNSRPKQLEAEPPSSQFLSPYRKPLSPL-----PSHANGG 61
Query: 56 TKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLY 115
T ++S HE LIR +L+KPFKVPI NY G S + LG+RR+G R++LHDP +ALVLY
Sbjct: 62 TSGKISAHEALIRSLLSKPFKVPIPNYKGSSLS-RGLGLRRKGPRRSLHDPYEEDALVLY 120
Query: 116 TPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIM 175
PP L+A L +D +K +VHVVVDP+L +LRPHQREGVKF+Y+C TG RI+ +YGCIM
Sbjct: 121 EPPPLTAQQQLSMDIEKQEVHVVVDPLLCKVLRPHQREGVKFLYDCTTGARIQGSYGCIM 180
Query: 176 ADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAAL 235
ADEMGLGKTLQCITL+WTLLRQGP A+P++ K IIVAPSSLVKNW NE+ KWLG R+ AL
Sbjct: 181 ADEMGLGKTLQCITLIWTLLRQGPSAQPIVSKVIIVAPSSLVKNWYNELYKWLGNRINAL 240
Query: 236 PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
ID GSK EID L +M G R P+L+ISYETFR HA+ LH VGLV+CDEGHRL
Sbjct: 241 AIDSGSKDEIDRNLERYMSQQGSRTPTPVLIISYETFRLHAAALHNGSVGLVICDEGHRL 300
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN ESQTYQAL L A RRVLLSGTPIQNDLLEYFSLVHFVNQGILGT EF++++ETPI
Sbjct: 301 KNLESQTYQALNKLNATRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTVSEFKRKFETPI 360
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
LRG+D+ A+DAE K ERL +L +VN+C+IRRT+A+LSKYLP+K EQVVC ++T LQ
Sbjct: 361 LRGRDADATDAEHKKGIERLTELASLVNKCIIRRTAAILSKYLPIKVEQVVCCRLTALQT 420
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSS---ITSLKKLCNHPDLVMDKIQTGADGFE 472
+Y LI S A++ + G K G + SS ITSLKKLCNHP+L+ +K Q +GFE
Sbjct: 421 AIYKRLIHSKALKIKLAEGSKGKPGGVSTSSLGFITSLKKLCNHPELIYEKAQMEDEGFE 480
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
+ + P + + ELS K+ VLD +LAV K T+DDK+VLVSNYTQTLDLFE+
Sbjct: 481 GVLEMFPQKFDLK----NVQPELSGKMQVLDYILAVTKATSDDKVVLVSNYTQTLDLFEK 536
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L + R Y++VRLDGSM+IKKR K+V+ FN +FIFMLSSKAGGCGLNLIGANRLVMF
Sbjct: 537 LCRQRRYQHVRLDGSMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGGCGLNLIGANRLVMF 596
Query: 592 DPDWNPANDDQAMARVWRDGQKKPC--------FVYRFLSTGSIEEKMMQRQAHKKALSS 643
DPDWNPANDDQAMARVWRDGQKK F+YR LSTG+IEEK+ QRQAHKKALSS
Sbjct: 597 DPDWNPANDDQAMARVWRDGQKKKAIFDLLLQVFIYRLLSTGTIEEKIFQRQAHKKALSS 656
Query: 644 CVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDL 703
CVVD EE+V +HFS+ +LR LF+L E T+SDTHDK KC RCVN IQ PPP +DCT +L
Sbjct: 657 CVVDEEENVEKHFSVEQLRDLFRLNEETLSDTHDKFKCRRCVNNIQAHPPPQGTDCTANL 716
Query: 704 SCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
S W+H + L D LK W +G+SFVF+Q S
Sbjct: 717 SLWNHCASSKGLEDTFLKGAWSSGISFVFHQKS 749
>gi|355745253|gb|EHH49878.1| hypothetical protein EGM_00608 [Macaca fascicularis]
Length = 753
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/764 (60%), Positives = 569/764 (74%), Gaps = 38/764 (4%)
Query: 1 RRSLAPSQLSKRSP-------ED-SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR P ED PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPGGGSSKDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIHDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIE--LSAKLMVLDTMLAVIKMTTDDKIVLVS 521
DGF A+++ P GY++ +L + ++K++VLD +LAV + + DK+VLVS
Sbjct: 467 CVEEEDGFVGALDLFPPGYSSKALEPQLSGDPFPTSKMLVLDYILAVTRSCSSDKVVLVS 526
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGL 580
NYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGL
Sbjct: 527 NYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGL 586
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKA
Sbjct: 587 NLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKA 646
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT 700
LSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT
Sbjct: 647 LSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCT 706
Query: 701 DDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
DL+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 707 SDLAQWNHCTDKRGLQDEVLQAAWDAASTAITFVFHQRSHEEQR 750
>gi|431896848|gb|ELK06112.1| DNA repair and recombination protein RAD54-like protein [Pteropus
alecto]
Length = 761
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/762 (61%), Positives = 564/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG T P K++ S T RK L +
Sbjct: 16 RRSLAPSQLAKRKPEGRSSDDEDWQPGAVT---PKKRKSSSETQSQECFLSPLRKTLTQL 72
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N P+ + S HE IR IL+KPFK+PI NY G ++ALG++R G R+AL
Sbjct: 73 TNR--PHCL------DSSHHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRAL 123
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 124 HDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 183
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITL+WTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 184 SRRIPGSHGCIMADEMGLGKTLQCITLIWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 243
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 244 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 303
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 304 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 363
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ A++A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 364 AYEFKKHFELPILKGRDAAATEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKFE 423
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 424 QVVCCRLTPLQTELYQRFLRQAKPADELREG---KMSVSSLSSITSLKKLCNHPALIYDK 480
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE ++I P GY+ S + +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 481 CVEEEDGFEGTLDIFPPGYS----SKTIAPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 536
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 537 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 596
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 597 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 656
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD+++CSRCVN QV+ PP SDCT D
Sbjct: 657 SCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCSRCVNNHQVRQPPDGSDCTSD 716
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 717 LAQWNHSTDKRGLKDEVLQAAWDAATTAITFVFHQRSHEEQR 758
>gi|354470052|ref|XP_003497406.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 1
[Cricetulus griseus]
gi|354470056|ref|XP_003497407.1| PREDICTED: DNA repair and recombination protein RAD54 isoform 2
[Cricetulus griseus]
Length = 744
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/760 (61%), Positives = 564/760 (74%), Gaps = 39/760 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS-------RKPLGSVDN 45
RRSLAPSQL++R PE PG T KK+K S + RKPL + N
Sbjct: 2 RRSLAPSQLARRKPEGRSSDDEDWQPGTVT----PKKQKSSNETQCFLSPFRKPLTQLIN 57
Query: 46 EDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD 105
+ P + S+HE IR IL+KPFKVPI NY G +ALG+++ G R+ALHD
Sbjct: 58 ------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGCRALGLKKAGIRRALHD 108
Query: 106 PTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
P ALVLY PP LS HD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 109 PLEEGALVLYEPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSR 168
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE+
Sbjct: 169 RIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVG 228
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VG
Sbjct: 229 KWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGNVG 288
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
LV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQ
Sbjct: 289 LVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQ 348
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EF+K +E PILR +D+ AS+A+R ERL +LI IVNRCLIRRTS +LSKYLPVK EQV
Sbjct: 349 EFKKHFELPILRSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQV 408
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
VC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 409 VCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIYDKCV 465
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
+G DGFE+ ++I P GY S + +LS K++VLD +LA+ + + DK+VLVSNYTQ
Sbjct: 466 SGEDGFEDTLDIFPPGYT----SKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQ 521
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIG 584
TLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIG
Sbjct: 522 TLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIG 581
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSC
Sbjct: 582 ANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSC 641
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
VVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT DL+
Sbjct: 642 VVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNRRQVWPPPDGSDCTSDLA 701
Query: 705 CWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+ S + ++
Sbjct: 702 QWNHSTDKRGLQDEVLQAAWDASPTAITFVFHHRSHEEQR 741
>gi|281351942|gb|EFB27526.1| hypothetical protein PANDA_008144 [Ailuropoda melanoleuca]
Length = 716
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/685 (64%), Positives = 530/685 (77%), Gaps = 12/685 (1%)
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
S+HE IR IL+KPFK+PI NY G ++ALG++R G R+ALHDP ALVLY PP L
Sbjct: 38 SQHEAFIRSILSKPFKIPIPNYQGP-LGSRALGLKRAGVRRALHDPLEEGALVLYEPPPL 96
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
SAHD LK+DK+K+ VHVVVDPVLS +LRPHQREGVKF++ECVT R+ ++GCIMADEMG
Sbjct: 97 SAHDQLKLDKEKLPVHVVVDPVLSKVLRPHQREGVKFLWECVTSRRVPGSHGCIMADEMG 156
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQCITLMWTLLRQ P +P IDKA++V+PSSLVKNW NE+ KWLGGR+ L IDGG
Sbjct: 157 LGKTLQCITLMWTLLRQSPECRPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGG 216
Query: 241 SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
SK EID KL FM G R +PIL+ISYETFR H VL K VGLV+CDEGHRLKN E+
Sbjct: 217 SKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSEN 276
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN G+LGTA EF+K +E PIL+G+D
Sbjct: 277 QTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGLLGTAHEFKKHFELPILKGRD 336
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ ELY
Sbjct: 337 AAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKR 396
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
++ ++ G K+ +++LSSIT LKKLCNHP L+ DK DGFE A+ I P
Sbjct: 397 FLRQAKPAEELREG---KMSVSSLSSITLLKKLCNHPALIYDKCVEEEDGFEGALEIFPP 453
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQTLDLFE+L + R Y
Sbjct: 454 GYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRARRYL 509
Query: 541 YVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
YVRLDG+M+IKKRAKVVE FN S +F+FMLSSKAGGCGLNLIGANRLVMFDPDWNPAN
Sbjct: 510 YVRLDGTMSIKKRAKVVERFNNPLSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 569
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E DV RHFS+
Sbjct: 570 DEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEPDVERHFSLG 629
Query: 660 ELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPI 719
EL+ LF L+E ++SDTHD+++C RCVN QV+P P SDCT DL+ W+H T+KR L D +
Sbjct: 630 ELKELFTLDEASLSDTHDRLRCRRCVNNHQVRPAPDGSDCTSDLAQWNHNTDKRGLKDEV 689
Query: 720 LKHCWGA---GVSFVFYQHSTKAEK 741
L+ W A ++FVF+Q S + ++
Sbjct: 690 LQAAWDAASTAITFVFHQRSHEEQR 714
>gi|332808861|ref|XP_513146.3| PREDICTED: DNA repair and recombination protein RAD54-like isoform
2 [Pan troglodytes]
Length = 747
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/765 (61%), Positives = 566/765 (73%), Gaps = 46/765 (6%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE---NTKLGMTALSSITSLKKLCNHPDLV 460
QVVC ++T LQ ELY + R K E +K+ +++LSSITSLKKLCNHP L+
Sbjct: 410 QVVCCRLTPLQTELYKRFL------RQAKPAEELLESKMSVSSLSSITSLKKLCNHPALI 463
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
DK DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLV
Sbjct: 464 HDKCVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLV 519
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCG 579
SNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCG
Sbjct: 520 SNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCG 579
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
LNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKK
Sbjct: 580 LNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKK 639
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDC 699
ALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDC
Sbjct: 640 ALSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDC 699
Query: 700 TDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
T DL+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 700 TSDLAQWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|201066350|ref|NP_001128432.1| DNA repair and recombination protein RAD54-like [Rattus norvegicus]
gi|197246624|gb|AAI69034.1| Rad54l protein [Rattus norvegicus]
Length = 748
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/759 (61%), Positives = 560/759 (73%), Gaps = 34/759 (4%)
Query: 1 RRSLAPSQLSKRSPED--SPGIKTFPPPVKKEKRSCTS------------RKPLGSVDNE 46
RRSLAPSQL++R PED S P V +KR T+ RKPL + N
Sbjct: 2 RRSLAPSQLARRKPEDISSDDEDWQPETVTPKKRKSTAETQAQQCFLSPFRKPLTQLLN- 60
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+ALHDP
Sbjct: 61 -----RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRALHDP 112
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
ALVLY PP LS HD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT R
Sbjct: 113 LEEGALVLYEPPPLSVHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRR 172
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
I ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE+ K
Sbjct: 173 IPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEK 232
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGL
Sbjct: 233 WLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVEVLKKGNVGL 292
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA E
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K +E PIL+ +D+ AS+A+R ERL +LI IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 353 FKKHFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 CCRLTPLQTELYKRFLRQAKPEEELHEG---KMSVSSLSSITSLKKLCNHPALIYDKCVA 469
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
DGFE + I P G Y S + +LS K++VLD +LA+ + + DK+VLVSNYTQT
Sbjct: 470 EEDGFEGTLGIFPPG----YNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQT 525
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGA 585
LDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGA
Sbjct: 526 LDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGA 585
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCV
Sbjct: 586 NRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCV 645
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT DL+
Sbjct: 646 VDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSDLAQ 705
Query: 706 WHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 706 WNHNTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 744
>gi|348522722|ref|XP_003448873.1| PREDICTED: DNA repair and recombination protein RAD54 [Oreochromis
niloticus]
Length = 747
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 457/746 (61%), Positives = 560/746 (75%), Gaps = 26/746 (3%)
Query: 1 RRSLAPSQLSKRSPE---------DSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNS 51
RRSLAPSQ++KR E P + +E RKPL ++N
Sbjct: 10 RRSLAPSQIAKRKQEGDYCEDEWTHKPEKRRKGDNEMRENHISFHRKPLTQINNR----- 64
Query: 52 KLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNA 111
P + +HE I+ IL+KPFK+PI NY G +ALG++R G R+ LHDP A +A
Sbjct: 65 --PACMDG-EKHEAFIQSILSKPFKIPIPNY-AGSLGIRALGLKRAGVRRPLHDPFAEDA 120
Query: 112 LVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
L+LY PP LSAHDL+K DK+K+ VHVVVDPVL +LRPHQR+GVKFM+ECVTG RI +Y
Sbjct: 121 LILYEPPALSAHDLIKADKEKLPVHVVVDPVLGKVLRPHQRQGVKFMWECVTGRRIPGSY 180
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKAI+V+PSSLV NW NE+ KWLG R
Sbjct: 181 GCIMADEMGLGKTLQCITLMWTLLRQSPDTKPEIDKAIVVSPSSLVHNWYNEVRKWLGTR 240
Query: 232 VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+ L IDGGSK I+ +L SF+ R PIL+ISYETFR HA VLH+ +VGL++CDE
Sbjct: 241 ITPLAIDGGSKEGINKQLESFVSQRSLRAHTPILIISYETFRLHAEVLHRGKVGLIICDE 300
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN ++QTYQAL + A+RRVL+SGTPIQNDLLEYFSLVHFVN GILGT+QEF+K++
Sbjct: 301 GHRLKNSDNQTYQALNTMSAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTSQEFKKRF 360
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+G+D+ ASD ER E+L++LI IVNRCLIRRTS +LSKYLP+K EQ+VC ++T
Sbjct: 361 ELPILKGRDADASDKERLSGEEKLKELISIVNRCLIRRTSDILSKYLPMKIEQIVCCRLT 420
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
LQ ELY + +K T++ G K+ +++LSSITSLKKLCNHP L+ +K +GF
Sbjct: 421 PLQTELYKHFLKQAKPIETLQKG---KISVSSLSSITSLKKLCNHPALIYEKCVEREEGF 477
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
E A+ + P Y+ + + +LS K++VLD +LA+ K TT DK+VLVSNYTQTLDLFE
Sbjct: 478 EGALELFPPNYS----TKDVEPQLSGKMLVLDYILAMTKTTTGDKVVLVSNYTQTLDLFE 533
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVM 590
+L + R Y YVRLDG+M+IKKRAK+VE FN SN EFIFMLSSKAGGCGLNLIGANRLVM
Sbjct: 534 KLCRSRRYLYVRLDGTMSIKKRAKIVEKFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVM 593
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
FDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK++QRQAHKKALSSCVVD E+
Sbjct: 594 FDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQ 653
Query: 651 DVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
DV RHFS+ ELR LF L E T SDTHDK +C RCVNG +++ P ++DC DLS W+H +
Sbjct: 654 DVERHFSLGELRELFTLNEETTSDTHDKFRCRRCVNGREIRQPDNDADCNSDLSHWNHCS 713
Query: 711 EKRWLVDPILKHCWGAGVSFVFYQHS 736
+K+ L D +LK W A VSFVF+Q S
Sbjct: 714 DKKGLRDQVLKASWDAAVSFVFHQRS 739
>gi|351698695|gb|EHB01614.1| DNA repair and recombination protein RAD54-like protein
[Heterocephalus glaber]
Length = 811
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/786 (59%), Positives = 560/786 (71%), Gaps = 53/786 (6%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKT---------------FPPPVKKEKRSCTSR 37
RRSLAPSQL+KR P+ PG T F P +K +R
Sbjct: 31 RRSLAPSQLAKRKPDGRSSDDEDWHPGAVTPKKWKSSNETQIQECFLSPFRKPLTQLINR 90
Query: 38 KP--------LGSVDNEDEPN----------SKLPMTKEEMSEHENLIRQILAKPFKVPI 79
P S DN L + E IR IL+KPFKVPI
Sbjct: 91 PPCLDSSQHSYLSFDNVVVVVVVVVVVVVVVGNLTFRSTNNRKIEAFIRSILSKPFKVPI 150
Query: 80 LNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVV 139
NY G +ALG++R G R+ALHDP ALVLY PP LSAHD LK+DK+K+ VHVVV
Sbjct: 151 PNYQGP-LGFRALGLKRAGVRRALHDPLEEGALVLYEPPPLSAHDQLKLDKEKLLVHVVV 209
Query: 140 DPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP 199
DPVLS +LRPHQREGVKF++ECVT RI +YGCIMADEMGLGKTLQCI LMWTLLRQ P
Sbjct: 210 DPVLSKVLRPHQREGVKFLWECVTSRRIPGSYGCIMADEMGLGKTLQCIALMWTLLRQSP 269
Query: 200 LAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
KP IDKA++V+PSSLVKNW NE+ KWLGGR+ L IDGGSK EID KL FM G R
Sbjct: 270 ECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGAR 329
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
+PIL+ISYETFR H VL K VGLV+CDEGHRLKN E+QTYQAL L RRVL+SG
Sbjct: 330 VPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISG 389
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TPIQNDLLEYFSLVHFVN GILGTAQEF+K +E PIL+ +D+ AS+A+R ERL++LI
Sbjct: 390 TPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKSRDAAASEADRQLGEERLQELI 449
Query: 380 GIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ ELY ++ ++ G K+
Sbjct: 450 SIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELREG---KM 506
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
+++LSSITSLKKLCNHP L+ DK DGFE A++I P GY+ S + +LS K+
Sbjct: 507 SVSSLSSITSLKKLCNHPALIHDKCVEEEDGFEGALDIFPPGYS----SKAIEPQLSGKM 562
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
+VLD +LAV + + DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE
Sbjct: 563 LVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVER 622
Query: 560 FNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++
Sbjct: 623 FNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYI 682
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDK 678
YR LS G+IEEK+ QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD+
Sbjct: 683 YRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDR 742
Query: 679 IKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQH 735
++C RCVN QV+PPP SDCT DL W+H T+KR L D +L+ W A ++FVFYQ
Sbjct: 743 LQCRRCVNNHQVRPPPDGSDCTSDLGQWNHSTDKRGLQDEVLQAAWDAASTAITFVFYQR 802
Query: 736 STKAEK 741
S + ++
Sbjct: 803 SHEEQR 808
>gi|51316190|sp|O12944.1|RAD54_CHICK RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Putative recombination factor GdRad54;
AltName: Full=RAD54 homolog
gi|1905887|gb|AAB54115.1| putative recombination factor GdRad54 [Gallus gallus]
Length = 733
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/706 (65%), Positives = 544/706 (77%), Gaps = 17/706 (2%)
Query: 37 RKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRR 96
RKPL + N P+ + S+HE IR IL+KPFKVPI NY G +ALG++R
Sbjct: 41 RKPLTQLTNR-------PLCLDS-SQHEAFIRSILSKPFKVPIPNYKGP-TGLRALGIKR 91
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
G R LHDP ALVLY PP LSAH+ LKIDKDK+ VHVVVDPVLS +LRPHQREGVK
Sbjct: 92 AGLRSPLHDPFEEGALVLYEPPLLSAHEQLKIDKDKVPVHVVVDPVLSRVLRPHQREGVK 151
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSL 216
F+++CVT RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSL
Sbjct: 152 FLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSL 211
Query: 217 VKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
V+NW NE+ KWLGGR+ L IDGGSK EID KL M G R +PIL+ISYETFR HA
Sbjct: 212 VRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRGLRVPSPILIISYETFRLHA 271
Query: 277 SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
L K VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFV
Sbjct: 272 EALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFV 331
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N GILGTAQEF++ +E PIL+G+D+ AS+AER K ERL++LI IVNRCLIRRTS +LSK
Sbjct: 332 NSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELISIVNRCLIRRTSDILSK 391
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
YLPVK EQVVC ++T LQ ELY N +K +K G K+ +++LSSITSLKKLCNH
Sbjct: 392 YLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEG---KINVSSLSSITSLKKLCNH 448
Query: 457 PDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
P L+ DK +GF A+++ P GY+ + + +LS K++VLD +LAV K T++DK
Sbjct: 449 PALIYDKCVEEEEGFMGALDLFPAGYS----TKSVEPQLSGKMLVLDYILAVTKSTSNDK 504
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKA 575
+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ EFIFMLSSKA
Sbjct: 505 VVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKA 564
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ
Sbjct: 565 GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQ 624
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPL 695
HKKALSSCVVD E+DV RHFS+ EL+ LF L E TISDTHDKIKC RCVNG QV+PPP
Sbjct: 625 THKKALSSCVVDEEQDVERHFSLGELKELFSLNETTISDTHDKIKCRRCVNGHQVRPPPE 684
Query: 696 ESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
SDCT DLS W+H +KR L D +LK W A V+F F+ HS + ++
Sbjct: 685 GSDCTSDLSQWNHCADKRGLQDSVLKAAWDAAVTFTFHHHSHEEQR 730
>gi|270009357|gb|EFA05805.1| hypothetical protein TcasGA2_TC030720 [Tribolium castaneum]
Length = 729
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/678 (65%), Positives = 539/678 (79%), Gaps = 14/678 (2%)
Query: 64 ENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAH 123
E LI++ L+ PFK P NY G ST+ LG+RR A + L+DP PNAL+LY+PP+ S H
Sbjct: 36 EELIKK-LSAPFKCPDPNYQGCN-STRTLGLRRSVAPRPLYDPNTPNALILYSPPEQSEH 93
Query: 124 DLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
+ LK D + VHVVVDP LSNILRPHQREGVKFMY+CVTGV+I +++GCIMADEMGLGK
Sbjct: 94 EKLKGD-GPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEMGLGK 152
Query: 184 TLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
TLQCITL+WTL+RQGP KP IDK IIV PSSLV+NW NEI KWL GR++ L +DGG A
Sbjct: 153 TLQCITLLWTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEIDKWLKGRLSCLIMDGGPDA 212
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
KL FMQ +GR + P+L+ISYETFR HA +LHK+E+GLVLCDEGHRLKNCE+QTY
Sbjct: 213 R--KKLTQFMQGFGRTAI-PVLIISYETFRMHAEILHKSEIGLVLCDEGHRLKNCENQTY 269
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
+ALMGLKA+RRVLLSGTPIQNDLLEYFSLVHFVN+G+LG+AQEF+K++E PILRGQDS A
Sbjct: 270 KALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDSTA 329
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
+D+ER KA ERL++L +VNRCLIRRTS LL+KYLPVK E +V ++T LQK++Y N I
Sbjct: 330 TDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMIVICQLTPLQKQIYLNYIN 389
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S+ +R+ + K ++AL+SIT+LKKLCNHPDL+MDKI G +GFE + ++LP
Sbjct: 390 SEGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLIMDKILEGGEGFEKSRHLLP---- 445
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
+Y ++ +LS KLM+LD LA +K +DK+VLVSNYTQTLDLFE+L + RGY+YVR
Sbjct: 446 PNYNDKDVMPQLSGKLMLLDCFLANLKNNYNDKVVLVSNYTQTLDLFEKLCRKRGYRYVR 505
Query: 544 LDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
LDG+M+IKKRAKVV FN S EFIFMLSSKAGGCGLNLIGANRL+MFDPDWNPANDDQ
Sbjct: 506 LDGTMSIKKRAKVVANFNDPESGEFIFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQ 565
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
AMARVWRDGQ+KPC++YRFL+ G+IEEK+ QRQAHKKALSS VVD E+ ARHFS++ELR
Sbjct: 566 AMARVWRDGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVDNNEETARHFSVAELR 625
Query: 663 SLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKH 722
LF+LE+ T SDTH+K+KC RC+ IQ K P E+DCT DL W+H +K+ L D +LK
Sbjct: 626 DLFKLEQ-TDSDTHEKLKCKRCLGKIQTKNPSDEADCTSDLQDWYHCWDKKGLADMVLKQ 684
Query: 723 CWGAG--VSFVFYQHSTK 738
W +SFVF+Q S K
Sbjct: 685 IWDLSKYISFVFHQKSAK 702
>gi|189238349|ref|XP_967988.2| PREDICTED: similar to steroid receptor-interacting snf2 domain
protein [Tribolium castaneum]
Length = 713
Score = 902 bits (2330), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/678 (65%), Positives = 539/678 (79%), Gaps = 14/678 (2%)
Query: 64 ENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAH 123
E LI++ L+ PFK P NY G ST+ LG+RR A + L+DP PNAL+LY+PP+ S H
Sbjct: 20 EELIKK-LSAPFKCPDPNYQGCN-STRTLGLRRSVAPRPLYDPNTPNALILYSPPEQSEH 77
Query: 124 DLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
+ LK D + VHVVVDP LSNILRPHQREGVKFMY+CVTGV+I +++GCIMADEMGLGK
Sbjct: 78 EKLKGD-GPVLVHVVVDPSLSNILRPHQREGVKFMYDCVTGVQIPNSFGCIMADEMGLGK 136
Query: 184 TLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
TLQCITL+WTL+RQGP KP IDK IIV PSSLV+NW NEI KWL GR++ L +DGG A
Sbjct: 137 TLQCITLLWTLVRQGPECKPTIDKGIIVCPSSLVRNWSNEIDKWLKGRLSCLIMDGGPDA 196
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
KL FMQ +GR + P+L+ISYETFR HA +LHK+E+GLVLCDEGHRLKNCE+QTY
Sbjct: 197 R--KKLTQFMQGFGRTAI-PVLIISYETFRMHAEILHKSEIGLVLCDEGHRLKNCENQTY 253
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
+ALMGLKA+RRVLLSGTPIQNDLLEYFSLVHFVN+G+LG+AQEF+K++E PILRGQDS A
Sbjct: 254 KALMGLKARRRVLLSGTPIQNDLLEYFSLVHFVNEGLLGSAQEFKKKFENPILRGQDSTA 313
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
+D+ER KA ERL++L +VNRCLIRRTS LL+KYLPVK E +V ++T LQK++Y N I
Sbjct: 314 TDSERQKAVERLKELSDLVNRCLIRRTSNLLTKYLPVKFEMIVICQLTPLQKQIYLNYIN 373
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S+ +R+ + K ++AL+SIT+LKKLCNHPDL+MDKI G +GFE + ++LP
Sbjct: 374 SEGLRKGVLNDVEVKASLSALASITTLKKLCNHPDLIMDKILEGGEGFEKSRHLLP---- 429
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
+Y ++ +LS KLM+LD LA +K +DK+VLVSNYTQTLDLFE+L + RGY+YVR
Sbjct: 430 PNYNDKDVMPQLSGKLMLLDCFLANLKNNYNDKVVLVSNYTQTLDLFEKLCRKRGYRYVR 489
Query: 544 LDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
LDG+M+IKKRAKVV FN S EFIFMLSSKAGGCGLNLIGANRL+MFDPDWNPANDDQ
Sbjct: 490 LDGTMSIKKRAKVVANFNDPESGEFIFMLSSKAGGCGLNLIGANRLIMFDPDWNPANDDQ 549
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
AMARVWRDGQ+KPC++YRFL+ G+IEEK+ QRQAHKKALSS VVD E+ ARHFS++ELR
Sbjct: 550 AMARVWRDGQQKPCYIYRFLAAGTIEEKIFQRQAHKKALSSTVVDNNEETARHFSVAELR 609
Query: 663 SLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKH 722
LF+LE+ T SDTH+K+KC RC+ IQ K P E+DCT DL W+H +K+ L D +LK
Sbjct: 610 DLFKLEQ-TDSDTHEKLKCKRCLGKIQTKNPSDEADCTSDLQDWYHCWDKKGLADMVLKQ 668
Query: 723 CWGAG--VSFVFYQHSTK 738
W +SFVF+Q S K
Sbjct: 669 IWDLSKYISFVFHQKSAK 686
>gi|332219863|ref|XP_003259077.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Nomascus leucogenys]
Length = 747
Score = 898 bits (2321), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/763 (61%), Positives = 564/763 (73%), Gaps = 42/763 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS----------RKPLGS 42
RRSLAPSQL+KR PE PG+ T +K K S + RKPL
Sbjct: 2 RRSLAPSQLAKRQPEGRSCDDEDWQPGLVT----SRKRKSSSETQIQECFLSPFRKPLSQ 57
Query: 43 VDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKA 102
+ N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+A
Sbjct: 58 LTNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRA 108
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECV
Sbjct: 109 LHDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECV 168
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
T RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSS VKNW N
Sbjct: 169 TSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSXVKNWYN 228
Query: 223 EITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
E+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 229 EVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKG 288
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILG
Sbjct: 289 SVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILG 348
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
TA EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK
Sbjct: 349 TAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKI 408
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
EQVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ D
Sbjct: 409 EQVVCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIHD 465
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
K DGF A+++ P G Y S L +LS K++VLD +LAV + + DK+VLVSN
Sbjct: 466 KCVEEEDGFVGALDLFPPG----YNSKTLEPQLSGKMLVLDYILAVTRSRSSDKVVLVSN 521
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLN 581
YTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLN
Sbjct: 522 YTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLN 581
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
LIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKAL
Sbjct: 582 LIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKAL 641
Query: 642 SSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTD 701
SSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVNG Q++PPP SDCT
Sbjct: 642 SSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNGRQIRPPPDGSDCTS 701
Query: 702 DLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
DL+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 702 DLAQWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>gi|62738897|pdb|1Z3I|X Chain X, Structure Of The Swi2SNF2 CHROMATIN REMODELING DOMAIN OF
EUKARYOTIC Rad54
Length = 644
Score = 894 bits (2309), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/651 (66%), Positives = 528/651 (81%), Gaps = 8/651 (1%)
Query: 92 LGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQ 151
LG+RR G RKALHDP ALVLY PP +SAHDL+K DK+K+ VHVVVDPVLS +LRPHQ
Sbjct: 1 LGLRRAGVRKALHDPFEDGALVLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQ 60
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIV 211
REGVKF+++CVTG RIE++YGCIMADEMGLGKTLQCITL+WTLL+Q P KP IDK I+V
Sbjct: 61 REGVKFLWDCVTGRRIENSYGCIMADEMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVV 120
Query: 212 APSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYET 271
+PSSLV+NW NE+ KWLGGRV + IDGGSK EID+KL +F+ G R PIL+ISYET
Sbjct: 121 SPSSLVRNWYNEVGKWLGGRVQPVAIDGGSKDEIDSKLVNFISQQGMRIPTPILIISYET 180
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
FR HA VLHK +VGLV+CDEGHRLKN ++QTY AL + A+RRVL+SGTPIQNDLLEYFS
Sbjct: 181 FRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALNSMNAQRRVLISGTPIQNDLLEYFS 240
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
LVHFVN GILGTAQEF+K++E PIL+G+D+ ASD +R ++L++LI IVNRCLIRRTS
Sbjct: 241 LVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGEQKLQELISIVNRCLIRRTS 300
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+LSKYLPVK EQVVC +T LQKELY +K +++ G K+ +++LSSITSLK
Sbjct: 301 DILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQTG---KISVSSLSSITSLK 357
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
KLCNHP L+ +K TG +GF+ A+++ P Y+ + + +LS K++VLD +LA+ +
Sbjct: 358 KLCNHPALIYEKCLTGEEGFDGALDLFPQNYS----TKAVEPQLSGKMLVLDYILAMTRT 413
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFM 570
TT DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAK+VE FN S+ EFIFM
Sbjct: 414 TTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFM 473
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK
Sbjct: 474 LSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEK 533
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQV 690
++QRQAHKKALSSCVVD E+DV RHFS+ ELR LF L E T+SDTHD+ +C RCVNG QV
Sbjct: 534 ILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFSLNEKTLSDTHDRFRCRRCVNGRQV 593
Query: 691 KPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
+PPP +SDCT DLS WHH +KR L DP+L+ W A VSFVF+Q S + ++
Sbjct: 594 RPPPDDSDCTCDLSNWHHCADKRGLRDPVLQASWDAAVSFVFHQRSHEDQR 644
>gi|312383263|gb|EFR28419.1| hypothetical protein AND_03670 [Anopheles darlingi]
Length = 814
Score = 887 bits (2292), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/757 (61%), Positives = 547/757 (72%), Gaps = 40/757 (5%)
Query: 2 RSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRS--CTSRKPLGSVDNEDEPNSKLPMTKEE 59
+SL PS+ S +SP F P+ +KR+ C R+ + P+S P+ K
Sbjct: 44 KSLVPSRCLPSSAVNSP----FKSPISAQKRARECRKRR---DPEPGSSPSSSSPLPKLS 96
Query: 60 MSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQ 119
SEHE +I +IL++PFKVPI NY +ST+ LG++R R+ALHDP A NALVLY+PP+
Sbjct: 97 ASEHEAMILKILSQPFKVPIANYVPE-HSTRCLGMKRSAGRRALHDPFACNALVLYSPPE 155
Query: 120 LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
LS H+ LK+D K+ VHVVVDP+L NILRPHQREGV+FMY+CVTG + D GCIMADEM
Sbjct: 156 LSEHEKLKMDASKLPVHVVVDPLLGNILRPHQREGVRFMYDCVTGAK-GDFNGCIMADEM 214
Query: 180 GLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GLGKTLQCITL+WTLLRQ P KP I KAIIV PSSLVKNW E KWLG RV L +DG
Sbjct: 215 GLGKTLQCITLLWTLLRQSPDCKPTIGKAIIVCPSSLVKNWYKEFGKWLGCRVNCLAMDG 274
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
GSK +L +M R P+L+ISYETFR +A +L+ +EVG VLCDEGHRLKNCE
Sbjct: 275 GSKEHTTKELEQYMANQSYRHGTPVLIISYETFRLYADILNASEVGAVLCDEGHRLKNCE 334
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+ TYQALMGLK KRRVLLSGTPIQNDL EY+SL+HFVN G+LGT EFRKQYE PILRGQ
Sbjct: 335 NLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLLHFVNPGMLGTTAEFRKQYEIPILRGQ 394
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D+ ++D ER KA ERL++L +VNRC+IRRTSALL+KYLPVK E
Sbjct: 395 DANSTDTEREKAAERLQELAALVNRCMIRRTSALLTKYLPVKFEM--------------- 439
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
N I+S R G++ K +TALS+IT+LKKLCNHPDLV DKIQ GADGFE A NILP
Sbjct: 440 NRIQSG--RAYNNNGQSRKATLTALSNITTLKKLCNHPDLVYDKIQEGADGFEKAGNILP 497
Query: 480 TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY 539
A+Y +L EL AKL++LD MLA IK T+DKIVLVSNYTQTLDLFE+L + RGY
Sbjct: 498 ----ANYSPRELRPELGAKLLLLDCMLASIKTNTNDKIVLVSNYTQTLDLFEKLCRKRGY 553
Query: 540 KYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
YVRLDG+MTIKKR KVV+ FN S++FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA
Sbjct: 554 GYVRLDGTMTIKKRGKVVDQFNSPDSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 613
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSM 658
ND+QAMARVWRDGQKKPCF+YR L+TGSIEEK+ QRQ HKKALS+ VVD ED RHF+
Sbjct: 614 NDEQAMARVWRDGQKKPCFIYRLLATGSIEEKIFQRQTHKKALSTTVVDNNEDGERHFTR 673
Query: 659 SELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDP 718
+L+ LF+L+E TISDTHD +C RC NG+Q K PP SDC DL W+H + + D
Sbjct: 674 DDLKDLFKLDEGTISDTHDIFRCKRCTNGVQTKLPPDNSDCMSDLVHWYHCANNKGIPDD 733
Query: 719 ILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
IL W VSFVF+ S A V E+E E+
Sbjct: 734 ILSKSWDITRCVSFVFHHRSNSA-----VVEQELAEQ 765
>gi|324507205|gb|ADY43057.1| DNA repair and recombination protein RAD54-like protein, partial
[Ascaris suum]
Length = 755
Score = 884 bits (2283), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/759 (59%), Positives = 554/759 (72%), Gaps = 27/759 (3%)
Query: 1 RRSLAPSQ-------LSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKL 53
RRSLAPSQ L + DS P K+ K + ++ PL + N E S
Sbjct: 2 RRSLAPSQSPGQIAPLVRCKSSDSDAESENERP-KRRKAAKSNMTPLRTNTNRIELMSPY 60
Query: 54 -PMTKEEMSE--------HENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALH 104
M E + E HE +I ++L++PF++P+ YT S KALG+R G R AL
Sbjct: 61 RTMLIEHLDELMVKERRLHEEMIGKLLSRPFRMPLSGYTACSGSQKALGLRHNGVRCALF 120
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
DP A ALVLYTPP++SAHD LKID+ +VHVVVDPVL+ ILRPHQREGVKFMY+C TG
Sbjct: 121 DPYAEGALVLYTPPEISAHDALKIDEKTKKVHVVVDPVLAAILRPHQREGVKFMYDCTTG 180
Query: 165 VRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEI 224
+RIE+AYGCIMADEMGLGKTLQCITL+WTLLRQ P AKP+I K +IV PSSLVKNW EI
Sbjct: 181 MRIENAYGCIMADEMGLGKTLQCITLLWTLLRQSPDAKPMISKVVIVCPSSLVKNWDKEI 240
Query: 225 TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
KWLGGRV +LPID G K EID L SF+ G R P+L+ISYETFR HA VL + EV
Sbjct: 241 AKWLGGRVNSLPIDSGGKEEIDRNLESFLSQMGSRCSTPVLIISYETFRLHAEVLLRKEV 300
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
GLV+CDEGHRLKN ++QTYQAL GLK +RRVL+SGTPIQNDLLEY+SLV+FVN G+LGTA
Sbjct: 301 GLVICDEGHRLKNSDNQTYQALSGLKCERRVLISGTPIQNDLLEYYSLVNFVNPGLLGTA 360
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
QEF++++E ILRG+D+ A+DA+R K +E L ++ IVN+C+IRRTS+LL+KYLPVK E
Sbjct: 361 QEFKRRFENVILRGRDADATDAQRAKGDEALAEMASIVNKCIIRRTSSLLTKYLPVKYEL 420
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
+VC K+TDLQ++LY LI S ++ + K+ TALS IT+LKKLCNHP LV DK
Sbjct: 421 IVCCKLTDLQEKLYQKLISSKRLKEDTSRSDG-KITGTALSFITNLKKLCNHPQLVYDKC 479
Query: 465 QTGADGFENAMNILPTGYA-ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
Q +GF+ + + P+G++ +++ S K+ VLD +LAV K TT+DK VLVSNY
Sbjct: 480 QKNEEGFQGCLELFPSGFSDKTFEPA-----FSGKMKVLDYLLAVTKQTTNDKFVLVSNY 534
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNL 582
TQT+D F L KLR Y YVRLDGS +IK+RAK+VE FN TS+E++F+LSSKAGGCGLNL
Sbjct: 535 TQTIDSFVELCKLRRYGYVRLDGSSSIKQRAKIVEKFNDPTSSEYVFLLSSKAGGCGLNL 594
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPANDDQAMAR+WRDGQKK CF+YR L+TG+IEEKM QRQ HKKALS
Sbjct: 595 IGANRLVMFDPDWNPANDDQAMARIWRDGQKKHCFIYRLLATGTIEEKMFQRQTHKKALS 654
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E DVARHFS +LR LF+L+ SDTH+ +KC+RCVNGI+ + P +D D
Sbjct: 655 SCVVDEEVDVARHFSKDQLRHLFELKTGIASDTHNTLKCTRCVNGIESREPRESADTGSD 714
Query: 703 LSCWHHVTEK-RWLVDPILKHCWGAG-VSFVFYQHSTKA 739
LS W+H R + D +LK + G ++FVF+Q S A
Sbjct: 715 LSDWYHTQRDIRKIPDQVLKSVFECGAITFVFHQKSHDA 753
>gi|195116621|ref|XP_002002852.1| GI10760 [Drosophila mojavensis]
gi|292630864|sp|B4KHL5.1|RAD54_DROMO RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|193913427|gb|EDW12294.1| GI10760 [Drosophila mojavensis]
Length = 783
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/762 (56%), Positives = 547/762 (71%), Gaps = 16/762 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCT---SRKPLGSVDNEDEPNSKLPMT 56
RRSLAPSQ R F PP+ KK KR C ++ D + LP+
Sbjct: 2 RRSLAPSQ---RLGVRIKSKDAFTPPLQKKNKRVCQEELQKRQSALRDATNRVELPLPIR 58
Query: 57 KEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYT 116
SE+E I ++LA+ FKVPI NY + LGVRR R+ALHDP A NALVLY
Sbjct: 59 FTANSEYEQAIAKVLARKFKVPIANYVPDYGGNRTLGVRRTIVRRALHDPQACNALVLYV 118
Query: 117 PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMA 176
PP + H+ + +D K+QVHVVVDP+LSN+LRPHQREGV+FMYECV G R + GCIMA
Sbjct: 119 PPAYTEHERMSMDPSKVQVHVVVDPILSNVLRPHQREGVRFMYECVEGKR-GNFNGCIMA 177
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP 236
DEMGLGKTLQC+TL WTLLRQ P KP I KAIIV+PSSLVKNW E TKWL GR+ L
Sbjct: 178 DEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCLA 237
Query: 237 IDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
++GGSK + L F R P+L+ISYETFR +A +L K EVG+V+CDEGHRLK
Sbjct: 238 MEGGSKEDTTRALEQFAMNTATRCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLK 297
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E IL
Sbjct: 298 NSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSIL 357
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
RGQ++ ++DAER +A ++ ++LIG+VN+C+IRRT+ +L+KYLPVK E VVC+K+T +Q +
Sbjct: 358 RGQNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQLQ 417
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
+YTN +KSD VRR++ N K +TAL+ IT+LKKLCNHPDL+ +KI GFEN+ N
Sbjct: 418 IYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKLCNHPDLIYEKIAAKEKGFENSQN 476
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
+LP +YK + ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE+L++
Sbjct: 477 VLP----PNYKPKDVNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARK 532
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
R Y YVRLDG+MTIKKR+KVV+ FN S + F+FMLSSKAGGCGLNLIGANRL MFDPDW
Sbjct: 533 RKYTYVRLDGTMTIKKRSKVVDRFNDPSTDCFLFMLSSKAGGCGLNLIGANRLFMFDPDW 592
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E +H
Sbjct: 593 NPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESSEKH 652
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWL 715
F+ +L+ LF E N +SDTH+K+KC RC +Q +PP +DCT LS W H + R L
Sbjct: 653 FTRDDLKDLFSFEANVLSDTHNKLKCKRCFQDVQRQPPAENTDCTSHLSQWFHCSNNRGL 712
Query: 716 VDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
D IL W A VSFVF+ S K +TE++E E+++
Sbjct: 713 PDSILSQAWTASKCVSFVFHHRSQAESKPAAITEDDESEQQQ 754
>gi|449675767|ref|XP_002170465.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Hydra magnipapillata]
Length = 716
Score = 879 bits (2271), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/704 (60%), Positives = 538/704 (76%), Gaps = 12/704 (1%)
Query: 37 RKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRR 96
RKPL +V+N +S + S HE LI+ ILAKPFKVP+ N+ G + ++LG+R+
Sbjct: 19 RKPLSNVNNVTLESSFVGGE----STHELLIKSILAKPFKVPMKNFKGSPHG-RSLGMRK 73
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
++ L+DP ALVLY+PP++SAH+ L ++ VHVVVDP L+++LRPHQREGVK
Sbjct: 74 SMSKLCLYDPFEEGALVLYSPPEVSAHNKLTSKSEENLVHVVVDPQLTSVLRPHQREGVK 133
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSL 216
F+Y+CV G RI+D +GCIMADEMGLGKTLQCIT++WTLLRQ P KP I+KAIIVAP+SL
Sbjct: 134 FLYDCVVGNRIKDNFGCIMADEMGLGKTLQCITVLWTLLRQSPSGKPEINKAIIVAPASL 193
Query: 217 VKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
VKNW EI KWL GRV L ID GSK+EID+KL+SFM R PIL+ISYETFR H
Sbjct: 194 VKNWDKEIEKWLKGRVHTLAIDSGSKSEIDDKLSSFMSQQQVRAPTPILIISYETFRLHT 253
Query: 277 SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
VLH++ VGLV+CDEGHRLKN E+QTYQAL LK K+R+LLSGTPIQNDLLEYFSLVHFV
Sbjct: 254 DVLHRSPVGLVICDEGHRLKNLENQTYQALNLLKTKKRILLSGTPIQNDLLEYFSLVHFV 313
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N G+LGT EFR+++E PILRG+D S++++ E+L +L+ IV++C+IRRTSA+LSK
Sbjct: 314 NGGMLGTVSEFRRKFEAPILRGRDGAGSESDQKIGEEKLAELLSIVSKCIIRRTSAILSK 373
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
YLPVKTEQ+V K+T LQ +LY + S R ++ + KL ++L+ I +KKLCNH
Sbjct: 374 YLPVKTEQIVMCKLTTLQSKLYKAFVNSKVARMQLQA--DAKLNASSLAFINLIKKLCNH 431
Query: 457 PDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
P+L+ DK + D + +N P + + +LS K+ VLD +LA++K T++DK
Sbjct: 432 PELIYDKQKLCEDNLQEVLNEFPPNFNTKVFAS----DLSGKMQVLDFILALVKSTSNDK 487
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKA 575
+VLVSNYTQT+DLFE+LS+LRGY+YVRLDGSM+IKKR KVV+ FN SN+F+FMLSSKA
Sbjct: 488 VVLVSNYTQTIDLFEKLSRLRGYQYVRLDGSMSIKKRMKVVDRFNDPNSNDFLFMLSSKA 547
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK F+YR LSTG+IEEK++QRQ
Sbjct: 548 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKEVFIYRLLSTGTIEEKILQRQ 607
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPL 695
HKKALSSCVVD E DV RHFS++EL+ LF+ + TI DTH+++KC RCVN +QVK PP
Sbjct: 608 THKKALSSCVVDEEVDVERHFSLNELKELFKYDSETICDTHERLKCRRCVNNVQVKAPPD 667
Query: 696 ESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKA 739
++DCT+DL+ W+H + + D ILK W +G+SFVF+Q S A
Sbjct: 668 QADCTNDLTLWNHSASTKGVSDIILKRAWNSGISFVFHQKSHDA 711
>gi|198417079|ref|XP_002130103.1| PREDICTED: similar to RAD54-like [Ciona intestinalis]
Length = 775
Score = 879 bits (2270), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/780 (57%), Positives = 560/780 (71%), Gaps = 42/780 (5%)
Query: 1 RRSLAPSQLSK-RSPEDSPGIKTFPPPVKKEKRSCTS-------------RKPLGSVDNE 46
RRSLAPSQL K + P D+ I K + S T RKPL ++ +
Sbjct: 2 RRSLAPSQLCKSQKPSDTNEINDDDDEFKFKTTSKTKNENHSPQMYISPYRKPLQLLNRK 61
Query: 47 DEPNSKLPM-----------TKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVR 95
+ P + SEHE+ I+ IL+KPFK+PI+NY G S + LGVR
Sbjct: 62 KKDEKGFPKKLNRPKKPQRPQNQSHSEHESFIKSILSKPFKIPIVNYKGSCLS-RGLGVR 120
Query: 96 REGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGV 155
R+ R+ LHDP +ALVLY PP+LS H+++K+DK KI VHVVVDP LS +LRPHQREGV
Sbjct: 121 RQLLRQPLHDPFEEDALVLYHPPELSPHEVMKMDKSKIPVHVVVDPRLSKVLRPHQREGV 180
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSS 215
KF+++CVTGVR+++ +GCIMADEMGLGKTLQCITLMWTLL+QGP P+I+KA++V+PSS
Sbjct: 181 KFLFDCVTGVRVKEQHGCIMADEMGLGKTLQCITLMWTLLKQGPDMTPIIEKAVVVSPSS 240
Query: 216 LVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
LVKNW E+ KWLGG+V L ID GSK EID L+ FM +GRR PIL+ISYETFR H
Sbjct: 241 LVKNWEKEVNKWLGGQVQTLAIDSGSKQEIDRNLDQFMSQHGRRVGLPILLISYETFRLH 300
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
A VLHK ++GLV+CDEGHRLKNCE+QTY AL + KRRVLLSGTPIQNDLLEYFSLVHF
Sbjct: 301 AKVLHKGKIGLVICDEGHRLKNCENQTYSALAKVNCKRRVLLSGTPIQNDLLEYFSLVHF 360
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
VN+G+LGTA EF+K++E PILRG+DS A D + +L++L+ +VN C+IRRTS +LS
Sbjct: 361 VNEGLLGTANEFKKKFEFPILRGRDSSACDDHKKLGETKLKELVDLVNLCIIRRTSDILS 420
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKS-----DAVRRTMKGGENTKLGMTA--LSSIT 448
KYLPVKTE ++C +T LQ ELY + D+++ T K +N++ G+T+ L++IT
Sbjct: 421 KYLPVKTELIICCPLTTLQFELYNSFANKQEFICDSIQPTKKRKKNSE-GVTSGGLTAIT 479
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
LKKLCNHP L+ +K G E+ I P+ + + ELS K+ ++D +LAV
Sbjct: 480 QLKKLCNHPALIYEKCLQQESGCEDMRKIFPSNFNPKL----VQPELSGKMKLVDYLLAV 535
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EF 567
+ +T DK VLVSNYTQTLDL E+L + R Y +VRLDGSMTIKKRAKVVE FN S+ EF
Sbjct: 536 TRTSTSDKFVLVSNYTQTLDLCEQLCRSRRYMFVRLDGSMTIKKRAKVVEKFNNPSSPEF 595
Query: 568 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
+FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKKPCF+YR L TG+I
Sbjct: 596 VFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKPCFIYRLLGTGTI 655
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ--LEENTISDTHDKIKCSRCV 685
EEK+ QRQAHKKALSSCVVD EEDVARHFS +LR LF ++ T SDTHD ++C+RCV
Sbjct: 656 EEKIFQRQAHKKALSSCVVDQEEDVARHFSRDQLRDLFSPLRQDGTQSDTHDSLRCTRCV 715
Query: 686 NGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWG-AGVSFVFYQHSTKAEKSKV 744
N IQV+PPP ++DC DL+ W H + + + D +L+ W G +F F Q S + ++ V
Sbjct: 716 NRIQVRPPPPDADCNSDLTNWKHCYQSKDISDLVLRQIWKQTGATFAFTQVSHEEQRITV 775
>gi|195398201|ref|XP_002057711.1| GJ18280 [Drosophila virilis]
gi|292630877|sp|B4M9A8.1|RAD54_DROVI RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194141365|gb|EDW57784.1| GJ18280 [Drosophila virilis]
Length = 786
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/763 (56%), Positives = 547/763 (71%), Gaps = 17/763 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCT---SRKPLGSVDNEDEPNSKLPMT 56
RRSLAPSQ R F PP+ KK KR C ++ D + LP+
Sbjct: 2 RRSLAPSQ---RLGVRIKSKDAFTPPLQKKNKRVCQIELQKRQSALRDATNTVELPLPIR 58
Query: 57 KEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYT 116
S++E I ++LA+ FKVPI NY + LGVRR R+ALHDP A NALVLYT
Sbjct: 59 FTANSDYEQAIAKVLARKFKVPIANYVPDYGGNRTLGVRRSIVRRALHDPQACNALVLYT 118
Query: 117 PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMA 176
PP + H+ + +D K+QVHVVVDP+LSN+LRPHQREGV+FMYECV G R + GCIMA
Sbjct: 119 PPAYTEHERMSLDPSKLQVHVVVDPILSNVLRPHQREGVRFMYECVEGKR-GNFNGCIMA 177
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP 236
DEMGLGKTLQC+TL WTLLRQ P KP I KAI+V+PSSLVKNW E TKWL GR+ L
Sbjct: 178 DEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCLA 237
Query: 237 IDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
++GGSK + L F R P+L+ISYETFR ++ +L K EVG+V+CDEGHRLK
Sbjct: 238 MEGGSKEDTTRTLEQFAMNTATRCGTPVLLISYETFRLYSHILCKTEVGMVICDEGHRLK 297
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGT +F++ +E IL
Sbjct: 298 NSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAIL 357
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
RGQ++ ++DAER +A E+ ++L+G+VN+C+IRRT+ +L+KYLPVK E VVC K+T +Q +
Sbjct: 358 RGQNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQ 417
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
LYTN +KSD VRR++ + K +TAL+ IT+LKKLCNHPDL+ +KI GFEN+ N
Sbjct: 418 LYTNFLKSDQVRRSLADCTD-KTTLTALADITTLKKLCNHPDLIYEKIAAREKGFENSQN 476
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
+LP +YK + ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE+L++
Sbjct: 477 VLP----PNYKPKDVNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARK 532
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
R Y YVRLDG+MTIKKR+KVV+ FN + + F+FMLSSKAGGCGLNLIGANRL MFDPDW
Sbjct: 533 RKYSYVRLDGTMTIKKRSKVVDRFNDPATDCFLFMLSSKAGGCGLNLIGANRLFMFDPDW 592
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D + +H
Sbjct: 593 NPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSSIIDNNDSAEKH 652
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWL 715
F+ +L+ LF+ E N +SDTH+K+KC RC +Q +PPP SDCT LS W H + R L
Sbjct: 653 FTRDDLKDLFRFEANVLSDTHNKLKCKRCFQDVQRQPPPENSDCTSHLSQWFHCSNNRGL 712
Query: 716 VDPILKHCWGAG--VSFVFYQHST-KAEKSKVVTEEEEKEEEE 755
D IL W A VSFVF+ S A++ +TE+ E+ +
Sbjct: 713 PDSILSQAWMASKCVSFVFHHRSQGDAKQPTCITEDNHSEQPQ 755
>gi|195031155|ref|XP_001988299.1| GH10642 [Drosophila grimshawi]
gi|292630863|sp|B4JCS7.1|RAD54_DROGR RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|193904299|gb|EDW03166.1| GH10642 [Drosophila grimshawi]
Length = 786
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/759 (56%), Positives = 544/759 (71%), Gaps = 15/759 (1%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---RKPLGSVDNEDEPNSKLPMTK 57
RRSLAPSQ + PP +KK KR+C ++ D + LP+
Sbjct: 2 RRSLAPSQRLGVRIKSKDAFT--PPLLKKNKRACQQELEKRQSALRDATNIVELPLPIRF 59
Query: 58 EEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP 117
SE+E I ++LA+ FKVPI NY ++LGVRR R+ALHDP A NALVL+TP
Sbjct: 60 TANSEYEQAIAKVLARKFKVPIANYVPDYGGNRSLGVRRSIVRRALHDPLACNALVLFTP 119
Query: 118 PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
P + H+ + +D K+QVHVVVDP+LSN+LRPHQREGV+FMYECV G R GCIMAD
Sbjct: 120 PVYTEHERMSLDPSKLQVHVVVDPLLSNVLRPHQREGVRFMYECVEGKR-GSFNGCIMAD 178
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI 237
EMGLGKTLQC+TL WTLLRQ KP I KAI+V+PSSLVKNW E TKWL GR+ L +
Sbjct: 179 EMGLGKTLQCVTLTWTLLRQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCLAM 238
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+GGSK E L F R P+L+ISYETFR +A +L K EVG+V+CDEGHRLKN
Sbjct: 239 EGGSKEETTRTLEQFAMNTSTRCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLKN 298
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E ILR
Sbjct: 299 SDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILR 358
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
GQ++ ++D ER +A + ++LIG+VN+C+IRRT+ +L+KYLPVK E VVC K+T +Q ++
Sbjct: 359 GQNADSTDTERERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQI 418
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
YTN +KSD V R++ N K +TALS IT+LKKLCNHPDL+ +K+ GFEN+ N+
Sbjct: 419 YTNFLKSDQVCRSLADC-NEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKGFENSQNV 477
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LP A+YK + ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE+L++ R
Sbjct: 478 LP----ANYKPKDINPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARKR 533
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y YVRLDG+MTIKKR+KVV+ FN S++ F+FMLSSKAGGCGLNLIGANRL MFDPDWN
Sbjct: 534 KYSYVRLDGTMTIKKRSKVVDRFNDPSSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWN 593
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E V +HF
Sbjct: 594 PANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESVEKHF 653
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
+ +L+ LF E N +SDTH+K+KC RC +Q +PP +DCT LS W H + R L
Sbjct: 654 TRDDLKDLFSFEANVLSDTHNKLKCKRCFQDVQRQPPADNTDCTSHLSQWFHCSNNRGLP 713
Query: 717 DPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
D IL W A VSFVF+ H ++AE T +E EE
Sbjct: 714 DTILSQAWTASKCVSFVFH-HRSQAEAKPAATTTDEDEE 751
>gi|312071167|ref|XP_003138483.1| hypothetical protein LOAG_02898 [Loa loa]
gi|307766356|gb|EFO25590.1| hypothetical protein LOAG_02898 [Loa loa]
Length = 755
Score = 865 bits (2236), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/704 (59%), Positives = 534/704 (75%), Gaps = 10/704 (1%)
Query: 55 MTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVL 114
+ ++E HE +I ++L+KPFK+PI +Y G + + LG+R R AL DP A ALVL
Sbjct: 51 VMQKEQGFHEEMISRLLSKPFKIPIPDYRSPGRA-RPLGLRHSAVRCALFDPYAEGALVL 109
Query: 115 YTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCI 174
+TPP+LSAHD LK+D QVH+VVDP+LS ILRPHQREGVKFMY+CVTGVRI A+GCI
Sbjct: 110 FTPPELSAHDALKLDATNKQVHIVVDPMLSAILRPHQREGVKFMYDCVTGVRIPSAHGCI 169
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAA 234
MADEMGLGKTLQCITLMWTLLRQGP AKP ++KA+IV PSSLVKNW EI KWLGGRV A
Sbjct: 170 MADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKAVIVCPSSLVKNWDKEIRKWLGGRVNA 229
Query: 235 LPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
LP+D G K EID L FM G R P+L+ISYETFR HAS+L + E+GL++CDEGHR
Sbjct: 230 LPVDSGGKDEIDRNLEKFMSQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHR 289
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN ++QTYQAL GLK +RRVL+SGTPIQNDLLEY+SL++FVN G+LGTA EF++++E
Sbjct: 290 LKNSDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENI 349
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
ILRG+D+ A+DA+R K + L ++ IV+RC+IRRTSALL+KYLPVK E ++C K+T+LQ
Sbjct: 350 ILRGRDADATDAQREKGDAALTEMSSIVSRCVIRRTSALLTKYLPVKYELIICCKLTELQ 409
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
++LY LI + ++ K E K+ TALS IT+LKKLCNHP L+ +K Q +GFE
Sbjct: 410 EKLYRQLISTFSMGGKQKVTEGDKITGTALSFITNLKKLCNHPQLIFNKCQKKEEGFEGC 469
Query: 475 MNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
+ + P + ++ S K+ VLD +LA + TT+DK VLVSNYTQT+D F L
Sbjct: 470 LKLFPGEFGRKFEPA-----FSGKMKVLDYLLAATRTTTNDKFVLVSNYTQTIDAFVELC 524
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+LR Y Y+RLDG+ TIK+RAK+VE FN S E++F+LSSKAGGCGLNLIGANRL+MFDP
Sbjct: 525 QLRRYPYIRLDGTCTIKQRAKLVEKFNDPKSVEYVFLLSSKAGGCGLNLIGANRLIMFDP 584
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNPANDDQAMARVWRDGQ+K CF+YR L++GSIEEKM QRQAHKKALSSCV+D DVA
Sbjct: 585 DWNPANDDQAMARVWRDGQRKNCFIYRLLASGSIEEKMFQRQAHKKALSSCVIDEASDVA 644
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK- 712
RHFS +LR LF L+ + SDTH +KC+RCVNG++ + P E+D DLS W+HV +
Sbjct: 645 RHFSKDQLRHLFDLKADIASDTHHSLKCNRCVNGVEYREPHEEADTNSDLSDWYHVQKDV 704
Query: 713 RWLVDPILKHCWGAGV-SFVFYQHSTKAEKSKVVTEEEEKEEEE 755
R + D +LK + GV +FVF+Q S A ++++V EE E +E++
Sbjct: 705 RKVPDKVLKRVFDCGVITFVFHQKSHDA-RNEIVKEENEIKEDD 747
>gi|195435389|ref|XP_002065674.1| GK15573 [Drosophila willistoni]
gi|292630875|sp|B4MX21.1|RAD54_DROWI RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194161759|gb|EDW76660.1| GK15573 [Drosophila willistoni]
Length = 784
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/766 (56%), Positives = 555/766 (72%), Gaps = 26/766 (3%)
Query: 1 RRSLAPSQ-LSKRSPEDSPGIKTFPPPV--KKEKRSCTSRKPLGSVDN--EDEPNSK--- 52
RRSLAPSQ L R + + F PP+ KK KR+C + D NS
Sbjct: 2 RRSLAPSQRLGVRLQPN----QEFTPPLLQKKNKRTCQQEQEQLQCQFALRDATNSNGSI 57
Query: 53 -LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNA 111
LP+ SE+E I ++LA+ FKVPI NY + LGVRR R+ALHDP A NA
Sbjct: 58 PLPIRFTANSEYELAIAKVLARKFKVPIANYVPDYGGNRCLGVRRSIVRRALHDPQACNA 117
Query: 112 LVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
LVLYTPP S H+ +K+D KI VHVVVDP+LSNILRPHQREGV+FMY+CV G + +
Sbjct: 118 LVLYTPPVYSEHERMKMDPTKILVHVVVDPLLSNILRPHQREGVRFMYDCVEGKK-GNFN 176
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
GCIMADEMGLGKTLQC+TL+WTLLRQ KP I KAIIV+PSSLVKNW E TKWL GR
Sbjct: 177 GCIMADEMGLGKTLQCVTLVWTLLRQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGR 236
Query: 232 VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+ L ++GGSK + L F R P+L+ISYETFR +A++L +NEVG+V+CDE
Sbjct: 237 MHCLAMEGGSKEDTIKALEQFSMNTSTRLGTPVLLISYETFRIYANILCQNEVGMVICDE 296
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +
Sbjct: 297 GHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNF 356
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+GQ++ +SD ER +A E+ ++LIG+VN+C+IRRT+ +L+KYLPVK E V+C+++T
Sbjct: 357 ENPILKGQNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLT 416
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
+Q E YTN +KSD VRR++ N K +TAL+ IT+LKKLC+HPDL+ +K+ GF
Sbjct: 417 SVQLEFYTNFLKSDKVRRSLADC-NEKASLTALADITTLKKLCSHPDLIYEKMLARDKGF 475
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
EN+ NILPT +YK L ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE
Sbjct: 476 ENSQNILPT----NYKPKDLNPELSGKFMLLDFMLATIRANSDDKVVLISNYTQTLDLFE 531
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVM 590
+L++ R Y +VRLDG+MTIKKR+KVV+ FN N+ F+FMLSSKAGGCGLNLIGANRL M
Sbjct: 532 QLARKRKYTFVRLDGTMTIKKRSKVVDRFNDPENDCFLFMLSSKAGGCGLNLIGANRLFM 591
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
FDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E
Sbjct: 592 FDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNE 651
Query: 651 DVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
+HF+ +L+ LF + +SDTH+K+KC RC+ +Q KPPP ++DCT LS W H +
Sbjct: 652 SAEKHFTRDDLKDLFSFDSKILSDTHEKLKCKRCLQNVQTKPPPEDTDCTSHLSQWFHCS 711
Query: 711 EKRWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEEE 754
R L D IL W A VSFVF+ S +++ + E EE ++E
Sbjct: 712 NNRGLPDDILAQAWTASKCVSFVFHHRS----QAQAIKESEETKQE 753
>gi|1765914|emb|CAA71278.1| RAD54 [Drosophila melanogaster]
Length = 784
Score = 861 bits (2225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/768 (56%), Positives = 552/768 (71%), Gaps = 22/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC R+ LG++ D +
Sbjct: 2 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSE 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+ +K+ G
Sbjct: 418 TAIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIYEKLTAREKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + N +SDTHDK+KC RCV IQ+KPPP ++DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ S E EE + EE
Sbjct: 713 SNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEE 760
>gi|17136368|ref|NP_476661.1| okra [Drosophila melanogaster]
gi|74960637|sp|O76460.1|RAD54_DROME RecName: Full=DNA repair and recombination protein RAD54-like;
Short=DmRAD54; AltName: Full=Protein okra; AltName:
Full=RAD54 DNA repair protein
gi|3264618|gb|AAC24577.1| Rad54 homolog OKR [Drosophila melanogaster]
gi|7295868|gb|AAF51168.1| okra [Drosophila melanogaster]
gi|220947310|gb|ACL86198.1| okr-PA [synthetic construct]
gi|220956782|gb|ACL90934.1| okr-PA [synthetic construct]
Length = 784
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/768 (56%), Positives = 557/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC R+ LG++ D +
Sbjct: 2 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSE 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+ +K+ G
Sbjct: 418 TAIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIYEKLTAREKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + N +SDTHDK+KC RCV IQ+KPPP ++DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ EEE ++ E
Sbjct: 713 SNNRGLPDNILAQAWMDCKCVSFVFH-HRSQAQEIVPSAEEEATDQPE 759
>gi|27819922|gb|AAL39744.2| LD35220p, partial [Drosophila melanogaster]
Length = 788
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/768 (56%), Positives = 557/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC R+ LG++ D +
Sbjct: 6 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSE 63
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 64 LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACN 123
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 124 ALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 182
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 183 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHG 242
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 243 RLLCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLISYETFRIYAEILCKYEVGMVICD 301
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 302 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 361
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 362 FESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 421
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+ +K+ G
Sbjct: 422 TAIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIYEKLTAREKG 480
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 481 FENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLF 536
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 537 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 596
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 597 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNN 656
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + N +SDTHDK+KC RCV IQ+KPPP ++DCT LS W+H
Sbjct: 657 ESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHC 716
Query: 710 TEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ EEE ++ E
Sbjct: 717 SNNRGLPDNILAQAWMDCKCVSFVFH-HRSQAQEIVPSAEEEATDQPE 763
>gi|292630953|sp|B4NXB8.2|RAD54_DROYA RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
Length = 784
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/768 (55%), Positives = 555/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC RK ++ D + +
Sbjct: 2 RRSLAPSQRGPMRPESRHSFT--PPLLKKNKRSCQQELEREQELDRKRQSALRDASNTMD 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYERAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPVACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFNPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSSRLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+ +KI G
Sbjct: 418 TSIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIYEKITAREKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ +Y + L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPS----NYNTKDLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + + +SDTH+K+KC RCV +QVKPPP +DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDADILSDTHEKLKCKRCVQNVQVKPPPDNTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCWG--AGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ + EE E+ E
Sbjct: 713 SNNRGLPDNILAQAWTDCKCVSFVFH-HRSQAQEIVAIAEEAASEQPE 759
>gi|194855241|ref|XP_001968502.1| GG24469 [Drosophila erecta]
gi|292630862|sp|B3NAN8.1|RAD54_DROER RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|190660369|gb|EDV57561.1| GG24469 [Drosophila erecta]
Length = 784
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/768 (55%), Positives = 553/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC RK ++ D +
Sbjct: 2 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRKRQSALRDASNTLE 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYERAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPVACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFHPPAYTEHERMGMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSSRLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ ++DAER +A + ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTDAERQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ + K +TAL+ IT+LKK+C+HP+L+ +KI G
Sbjct: 418 TSIQLELYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKICSHPNLIYEKITARDKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ Y A L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPSNYNAK----DLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + + +SDTHDK+KC RCV IQ+KPPP ++DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDADILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ EE E+ E
Sbjct: 713 SNNRGLPDNILAQAWMDCKCVSFVFH-HRSQAQEIVASAEEAASEQPE 759
>gi|241640781|ref|XP_002410926.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503624|gb|EEC13118.1| conserved hypothetical protein [Ixodes scapularis]
Length = 654
Score = 853 bits (2205), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/687 (60%), Positives = 509/687 (74%), Gaps = 37/687 (5%)
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
S+HE IR +L+KP+KVPI NY +++LG++R + LHDP NALVLY PP L
Sbjct: 1 SQHEAFIRSLLSKPYKVPIPNYVPS-LQSRSLGLKRTSGPRPLHDPDEENALVLYAPPPL 59
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
S H+ +I VHVVVDPVL+ +LRPHQREGVKFM++CVTG +IE +YGCIMADEMG
Sbjct: 60 SNHE--QISTTSRLVHVVVDPVLTQVLRPHQREGVKFMWDCVTGKQIEGSYGCIMADEMG 117
Query: 181 LGKTLQCITLMWTLLRQGP-LAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
LGKTLQCITL+WTLLRQ P A P I KA+IV PSSLVKNW NE++KWLG RV ++ I+
Sbjct: 118 LGKTLQCITLLWTLLRQSPEFATPTITKAVIVTPSSLVKNWHNELSKWLGDRVRSVAIES 177
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
GSK EID + FM +GRR P+L++SYETFR HA+ L EVG V+CDEGHRLKNCE
Sbjct: 178 GSKTEIDAHIRGFMAAFGRRVCTPVLILSYETFRLHANALQSGEVGCVICDEGHRLKNCE 237
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
+QTY AL GL+ KRR+LLSGTPIQNDLLEYFSL+HFVN GILGTAQEF++++E PIL+ +
Sbjct: 238 NQTYHALNGLRTKRRILLSGTPIQNDLLEYFSLIHFVNAGILGTAQEFKRKFELPILKSR 297
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
DSC+SDAER + ERLE+LI IVNRCLIRRT+ALLS+YLPVKTE +VC MT +Q+E Y
Sbjct: 298 DSCSSDAERARGQERLEELITIVNRCLIRRTNALLSRYLPVKTEHIVCCAMTPIQREWYD 357
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
L +M+GG T L++IT LKKLCNHP LV + F ++
Sbjct: 358 RLA-------SMRGG-------TPLATITLLKKLCNHPSLVR-------ECFPDS----- 391
Query: 480 TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY 539
++K+ ++ ELS KL VLD +LA+I+ TTDDK+VL+SNYTQTLD+FERL + RGY
Sbjct: 392 ---GPTFKASTVMPELSGKLKVLDCLLAIIRSTTDDKVVLISNYTQTLDVFERLCRERGY 448
Query: 540 KYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
+ RLDGSMTIKKRAK+V FN +S EF FMLSSKAGGCGLNLIGANRLVMFDPDWNPA
Sbjct: 449 GFFRLDGSMTIKKRAKIVAAFNVPSSPEFAFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 508
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSM 658
ND QAMAR+WRDGQKKPC+VYR +S+GSIEEK++QRQ HKKALSSCVVD EED S
Sbjct: 509 NDAQAMARIWRDGQKKPCYVYRLVSSGSIEEKILQRQTHKKALSSCVVDSEEDCESLEST 568
Query: 659 SELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDP 718
++ LF + TH+ + C RCVNGIQ KPPP ++D DLS WHH K+ L D
Sbjct: 569 TQTTHLFCISNELALSTHESLSCRRCVNGIQTKPPPEDADVGSDLSQWHHAASKKQLDDT 628
Query: 719 ILKHCWGAGVSFVFYQHSTKAEKSKVV 745
+L+ CW GV+F F Q K+ + KV+
Sbjct: 629 VLRQCWDMGVNFAFSQ---KSHRIKVI 652
>gi|170580649|ref|XP_001895355.1| recombination factor GdRad54 [Brugia malayi]
gi|158597754|gb|EDP35808.1| recombination factor GdRad54, putative [Brugia malayi]
Length = 865
Score = 850 bits (2196), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/686 (60%), Positives = 520/686 (75%), Gaps = 10/686 (1%)
Query: 55 MTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVL 114
+ ++E HE +I ++L++PFK+PI +Y G + + LG+R R AL DP + ALVL
Sbjct: 160 LMQKERGFHEEMISRLLSRPFKIPIPDYRSPGRA-RPLGLRHSTVRCALFDPYSEGALVL 218
Query: 115 YTPPQLSAHDLLKIDK-DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
+TPP+LSAHD LK+D +K +VHVVVDP LS +LRPHQREGVKFMY+CVTGVRI A+GC
Sbjct: 219 FTPPELSAHDALKLDTTNKQKVHVVVDPTLSAVLRPHQREGVKFMYDCVTGVRIPSAHGC 278
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQCITLMWTLLRQGP AKP ++K +IV PSSLVKNW EI KWLGGRV
Sbjct: 279 IMADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKTVIVCPSSLVKNWDKEIRKWLGGRVN 338
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
ALP+D G K EID L FM G R P+L+ISYETFR HAS+L + E+GL++CDEGH
Sbjct: 339 ALPVDSGGKDEIDRNLEKFMSQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGH 398
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN ++QTYQAL GLK +RRVL+SGTPIQNDLLEY+SL++FVN G+LGTA EF++++E
Sbjct: 399 RLKNSDNQTYQALFGLKCERRVLISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFEN 458
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
ILRG+D+ A+DA+R K + L ++ IV++C+IRRTSALL+KYLPVK E ++C K+T+L
Sbjct: 459 IILRGRDADATDAQREKGDTALTEMSSIVSKCIIRRTSALLTKYLPVKYELIICCKLTEL 518
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q++LY LI + + K E K+ TALS IT+LKKLCNHP L+++K Q +GFE+
Sbjct: 519 QEKLYRQLISAFSKGGKQKVTEGDKITGTALSFITNLKKLCNHPQLILNKCQKKEEGFED 578
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ + P + ++ S K+ VLD +LA + TT+DK VLVSNYTQT+D F L
Sbjct: 579 CLKLFPGEFGKKFEPA-----FSGKMKVLDYLLAATRATTNDKFVLVSNYTQTIDAFVEL 633
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
+LR Y Y+RLDG+ TIK+RAK+VE FN S E++F+LSSKAGGCGLNLIGANRL+MFD
Sbjct: 634 CQLRRYPYIRLDGTCTIKQRAKLVEKFNDPESVEYVFLLSSKAGGCGLNLIGANRLIMFD 693
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPANDDQAMARVWRDGQKK CF+YR LSTGSIEEKM QRQAHKKALSSCVVD DV
Sbjct: 694 PDWNPANDDQAMARVWRDGQKKNCFIYRLLSTGSIEEKMFQRQAHKKALSSCVVDEISDV 753
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
ARHFS +LR LF L+ + SDTH +KC RCVNGI+ + P +D DLS W+HV +
Sbjct: 754 ARHFSKDQLRHLFDLKADVASDTHHSLKCDRCVNGIEYREPQEHADTNSDLSDWYHVQKD 813
Query: 713 -RWLVDPILKHCWGAG-VSFVFYQHS 736
R + D +LK + G ++FVF+Q S
Sbjct: 814 VRKVPDKVLKRVFDCGAITFVFHQKS 839
>gi|195470937|ref|XP_002087763.1| GE14966 [Drosophila yakuba]
gi|194173864|gb|EDW87475.1| GE14966 [Drosophila yakuba]
Length = 772
Score = 847 bits (2188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/745 (56%), Positives = 545/745 (73%), Gaps = 21/745 (2%)
Query: 24 PPPVKKEKRSCTS---------RKPLGSV-DNEDEPNSKLPMTKEEMSEHENLIRQILAK 73
PP +KK KRSC RK ++ D + + LP+ SE+E I ++LA+
Sbjct: 11 PPLLKKNKRSCQQELEREQELDRKRQSALRDASNTMDLPLPIRFTANSEYERAIAKVLAR 70
Query: 74 PFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKI 133
FKVP+ NY + LGVRR +R+ LHDP A NALVL+ PP + H+ + +D K+
Sbjct: 71 KFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPVACNALVLFNPPAYTEHERMGMDPTKV 130
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
VHVVVDP+LSNILRPHQREGV+FMYECV G R + GCIMADEMGLGKTLQC+TL+WT
Sbjct: 131 LVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGCIMADEMGLGKTLQCVTLVWT 189
Query: 194 LLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM 253
LLRQGP KP I+KAI+V+PSSLVKNW E TKWL GR+ LP++GG+K L F
Sbjct: 190 LLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFS 249
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
T R P+L+ISYETFR +A +L K EVG+V+CDEGHRLKN ++ TYQALMGLK KR
Sbjct: 250 MTSSRLGT-PVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKR 308
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
RVLLSGTPIQNDL EY+SLV+FVN +LGTA F++ +E+ ILRGQ++ +++ ER +A E
Sbjct: 309 RVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEGERQRAIE 368
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+T +Q ELYTN +KSD VRR++
Sbjct: 369 KTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFLKSDQVRRSLAD 428
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
N K +TAL+ IT+LKK+C+HPDL+ +KI GFEN+ N+LP+ +Y + L
Sbjct: 429 C-NEKASLTALADITTLKKICSHPDLIYEKITAREKGFENSQNVLPS----NYNTKDLNP 483
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLFE+L++ R Y +VRLDG+M+IKKR
Sbjct: 484 ELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKR 543
Query: 554 AKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL MFDPDWNPAND+QAMARVWRDGQ
Sbjct: 544 SKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQ 603
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E +HF+ +L+ LF + + +
Sbjct: 604 KKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDADIL 663
Query: 673 SDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWG--AGVSF 730
SDTH+K+KC RCV +QVKPPP +DCT LS W+H + R L D IL W VSF
Sbjct: 664 SDTHEKLKCKRCVQNVQVKPPPDNTDCTSHLSQWYHCSNNRGLPDNILAQAWTDCKCVSF 723
Query: 731 VFYQHSTKAEKSKVVTEEEEKEEEE 755
VF+ H ++A++ + EE E+ E
Sbjct: 724 VFH-HRSQAQEIVAIAEEAASEQPE 747
>gi|194760847|ref|XP_001962644.1| GF14336 [Drosophila ananassae]
gi|292630861|sp|B3MMA5.1|RAD54_DROAN RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|190616341|gb|EDV31865.1| GF14336 [Drosophila ananassae]
Length = 791
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/757 (55%), Positives = 543/757 (71%), Gaps = 27/757 (3%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV--KKEKRSCTSRKPLGSVDNEDEPNSK------ 52
RRSLAPSQ R + + F PP+ KK KR+C L + +ED+ +
Sbjct: 2 RRSLAPSQ---RIGQSTASRNAFTPPLLQKKNKRACQKDLRLDTDADEDKERKRFGLRDA 58
Query: 53 ------LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
LP+ S +E I Q+LA+ FKVPI NY + LGVRR R+ LHDP
Sbjct: 59 TNSEIPLPIRFTANSAYELAIAQVLARKFKVPIDNYVPDYGGNRCLGVRRVVVRRPLHDP 118
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
A NALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G +
Sbjct: 119 QACNALVLFQPPNYTEHERMSMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKK 178
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
D GCIMADEMGLGKTLQC+TL+WTLLRQGP +KP I+KAI+V+PSSLVKNW E TK
Sbjct: 179 -GDFNGCIMADEMGLGKTLQCVTLVWTLLRQGPESKPTINKAIVVSPSSLVKNWEKEFTK 237
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WL GR+ L ++GG+K L F T + P+L+ISYETFR +A +L K EVG+
Sbjct: 238 WLQGRLLCLAMEGGTKENTIRVLEQFSMTSSKLGT-PVLLISYETFRIYAEILCKYEVGM 296
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +
Sbjct: 297 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAAD 356
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F++ +E ILRGQ++ +++ ER KA E+ ++LIG+V++C+IRRT+ +L+KYLP+K E V+
Sbjct: 357 FKRNFENSILRGQNADSTEGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVI 416
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C+K+T +Q +LYTN + SD VRR++ N K +TAL+ IT+LKK+C+HPDL+ KI+
Sbjct: 417 CVKLTAIQLQLYTNFLNSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIHQKIEA 475
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
GFEN+ N+LP+ +YK ++ E S K M+LD MLA I+ +DK+VL+SNYTQT
Sbjct: 476 KEKGFENSQNVLPS----NYKPKEICPEWSGKFMLLDFMLAAIRAAGNDKVVLISNYTQT 531
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGA 585
LDLFE+L++ R Y +VRLDG+M+IKKR+KVV+ FN +E F+FMLSSKAGGCGLNLIGA
Sbjct: 532 LDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFMLSSKAGGCGLNLIGA 591
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRL MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++G+IEEK++QRQ HKK+LSS +
Sbjct: 592 NRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTI 651
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
+D E +HF+ +L+ LF ++ +SDTH+K+KC RCV IQ KPP +DCT LS
Sbjct: 652 IDNNESSEKHFTRDDLKDLFSFDQKILSDTHEKLKCKRCVQNIQTKPPSESTDCTSHLSQ 711
Query: 706 WHHVTEKRWLVDPILKHCWGAG--VSFVFYQHSTKAE 740
W+H + R L D IL W VSFVF+ S E
Sbjct: 712 WYHCSNNRGLPDSILAQAWTDSKCVSFVFHHRSQAKE 748
>gi|198473012|ref|XP_001356143.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
gi|292630937|sp|Q29KH2.2|RAD54_DROPS RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|198139260|gb|EAL33203.2| GA17651 [Drosophila pseudoobscura pseudoobscura]
Length = 782
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/763 (54%), Positives = 541/763 (70%), Gaps = 19/763 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCTS---RKPLGSVDNEDEPNSK---L 53
RRSLAPSQ R + F PP+ KK KR+C ++ L D N+ L
Sbjct: 2 RRSLAPSQ---RGGQRLSSRNDFTPPLLKKNKRACQQDLEQERLRQSALRDATNTSDLPL 58
Query: 54 PMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
P+ +E+E I ++LA+ FKVPI NY + LGVRR R+ LHDP A NALV
Sbjct: 59 PIRFTANTEYEMAIAKVLARKFKVPIDNYVPDYGGNRTLGVRRRIVRRPLHDPLACNALV 118
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
LY P + H+ + ++ + VHVVVDP+LSNILRPHQREGV+FMYECV G R + GC
Sbjct: 119 LYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGC 177
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQC+ L+WTLL+Q KP I+K IIV+PSSLVKNW E TKWL GR+
Sbjct: 178 IMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMH 237
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
L ++GGSK L F R P+L+ISYETFR +A +L K EVG+V+CDEGH
Sbjct: 238 CLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGMVICDEGH 297
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E
Sbjct: 298 RLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFEN 357
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
ILRGQ++ ++D ER +A E+ ++LI +V++C+IRRT+ +L+KYLPVK E V+C K+T +
Sbjct: 358 CILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPI 417
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q +LYTN +KSD VRR++ + K +TAL+ IT+LKKLC+HP+L+ +KI GFEN
Sbjct: 418 QLQLYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKLCSHPNLICEKIAAEEKGFEN 476
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ NILP Y G++ ELS K +LD MLA I+ +DK+VL+SNYTQTLDLFE+L
Sbjct: 477 SQNILPINYNP---KGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFEQL 533
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL MFD
Sbjct: 534 ARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFD 593
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E
Sbjct: 594 PDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESA 653
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
+HF+ +L+ LF + + +SDTHDK+KC RCV +Q+KPPP ++DCT LS W+H +
Sbjct: 654 EKHFTRDDLKDLFSFDPDILSDTHDKLKCKRCVQNVQMKPPPDDTDCTSHLSQWYHCSNN 713
Query: 713 RWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
R L D IL W VSFVF+ H ++++K + E E
Sbjct: 714 RGLPDNILAQAWTDSKCVSFVFH-HRSQSQKIETTPATETSVE 755
>gi|195161916|ref|XP_002021802.1| GL26701 [Drosophila persimilis]
gi|292630865|sp|B4GS98.1|RAD54_DROPE RecName: Full=DNA repair and recombination protein RAD54-like;
AltName: Full=Protein okra
gi|194103602|gb|EDW25645.1| GL26701 [Drosophila persimilis]
Length = 782
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/763 (54%), Positives = 540/763 (70%), Gaps = 19/763 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCTS---RKPLGSVDNEDEPNSK---L 53
RRSLAPSQ R + F PP+ KK KR+C ++ L D N+ L
Sbjct: 2 RRSLAPSQ---RGGQRLSSRNDFTPPLLKKNKRACQQDLEQERLRQSALRDATNTSDLPL 58
Query: 54 PMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
P+ +E+E I ++LA+ FKVPI NY + LGVRR R+ LHDP A NALV
Sbjct: 59 PIRFTANTEYEMAIAKVLARKFKVPIDNYVPDYGGNRTLGVRRRIVRRPLHDPLACNALV 118
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
LY P + H+ + ++ + VHVVVDP+LSNILRPHQREGV+FMYECV G R + GC
Sbjct: 119 LYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGC 177
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQC+ L+WTLL+Q KP I+K IIV+PSSLVKNW E TKWL GR+
Sbjct: 178 IMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMH 237
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
L ++GGSK L F R P+L+ISYETFR +A +L K EVG+V+CDEGH
Sbjct: 238 CLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGMVICDEGH 297
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E
Sbjct: 298 RLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFEN 357
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
ILRGQ++ ++D ER +A E+ ++LI +V++C+IRRT+ +L+KYLPVK E V+C K+T +
Sbjct: 358 CILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPI 417
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q +LYTN +KSD VRR++ + K +TAL+ IT+LKKLC+HP+L+ +KI G GFEN
Sbjct: 418 QLQLYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKLCSHPNLICEKIAAGEKGFEN 476
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ NILP Y G++ ELS K +LD MLA I+ +DK+VL+SNYTQTLDLFE L
Sbjct: 477 SQNILPINYNPK---GEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFELL 533
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL MFD
Sbjct: 534 ARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFD 593
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E
Sbjct: 594 PDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESA 653
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
+HF+ +L+ LF + + +SDTHDK+KC RCV +Q+ PPP ++DCT LS W+H +
Sbjct: 654 EKHFTRDDLKDLFSFDPDILSDTHDKLKCKRCVQNVQMMPPPDDTDCTSHLSQWYHCSNN 713
Query: 713 RWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
R L D IL W VSFVF+ H ++++K + E E
Sbjct: 714 RGLPDNILAQAWTDSKCVSFVFH-HRSQSQKIEATPATETSVE 755
>gi|444519261|gb|ELV12696.1| DNA repair and recombination protein RAD54-like protein [Tupaia
chinensis]
Length = 620
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/615 (65%), Positives = 483/615 (78%), Gaps = 11/615 (1%)
Query: 131 DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT RI ++GCIMADEMGLGKTLQCITL
Sbjct: 10 EKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITL 69
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
MWTLLRQ P KP IDKA++V+PSSLVKNW NE+ KWLGGR+ L IDGGSK EID KL
Sbjct: 70 MWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLE 129
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
FM G R +PIL+ISYETFR H VL K VGLV+CDEGHRLKN E+QTYQAL L
Sbjct: 130 GFMNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLN 189
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+K +E PIL+G+D+ AS+AER
Sbjct: 190 TSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKHFELPILKGRDAAASEAERQL 249
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ ELY ++
Sbjct: 250 GEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTSLQTELYKRFLRQAKPAEE 309
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK 490
++ G K+ +++LSSITSLKKLCNHP L+ DK +GFE A+NI P GY+ S
Sbjct: 310 LREG---KMSVSSLSSITSLKKLCNHPALIYDKCVEEENGFEGALNIFPPGYS----SKA 362
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
L +LS K++VLD +LAV + + DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+I
Sbjct: 363 LEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSI 422
Query: 551 KKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
KKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWR
Sbjct: 423 KKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR 482
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
DGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E++V RHFS+ EL+ LF L+E
Sbjct: 483 DGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQNVERHFSLGELKELFTLDE 542
Query: 670 NTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA--- 726
++SDTHD+++C RCVN QV PPP SDCT DL+ W+H T+KR L D +L+ W A
Sbjct: 543 ASLSDTHDRLRCRRCVNSRQVWPPPDGSDCTSDLAQWNHSTDKRSLQDEVLQAAWDAAST 602
Query: 727 GVSFVFYQHSTKAEK 741
+SFVF+Q S + ++
Sbjct: 603 AISFVFHQRSHEEQR 617
>gi|395858245|ref|XP_003801483.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Otolemur garnettii]
Length = 739
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/766 (56%), Positives = 535/766 (69%), Gaps = 56/766 (7%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEARCSDDEDWQPGVVT---PKKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
+ + S+HE IR IL+KPFKVPI NY G +ALG++R G R+AL
Sbjct: 59 TSRS--------LCLDSSQHEAFIRSILSKPFKVPIPNYQGP-LGFRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+ + VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEEGALVLYEPPLLSAHDQLKLDKENLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM +G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDRKLEGFMSQHGARVPSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS-GTPIQNDLLEYFSLVH---FVNQG 339
VGLV+CDE + L +R+ + S T +Q L + L
Sbjct: 290 VGLVICDE----------VLDSASSLSGRRKSVSSLSTAVQE--LRHCCLAGPGWGFKPA 337
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
LGTA EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLP
Sbjct: 338 TLGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTTIVNRCLIRRTSDILSKYLP 397
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
VK E+VVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L
Sbjct: 398 VKIEEVVCCRLTPLQTELYKRFLRQAKPAEELREG---KISVSSLSSITSLKKLCNHPAL 454
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ DK GFE A+++ P GY+ S L +LS K++VLD +LAV + ++DK+VL
Sbjct: 455 IYDKCVEEEAGFEGALDVFPPGYS----SKGLEPQLSGKMLVLDYILAVTRSRSNDKVVL 510
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGC 578
VSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGC
Sbjct: 511 VSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGC 570
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HK
Sbjct: 571 GLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHK 630
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESD 698
KALSSCVVD E+DV RHFS+ EL+ LF LEE ++SDTHD++ C RCVNG QV PPP SD
Sbjct: 631 KALSSCVVDEEQDVERHFSLGELKELFILEEASLSDTHDRLHCRRCVNGRQVFPPPDGSD 690
Query: 699 CTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
CT DL+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 691 CTSDLAQWNHCTDKRGLQDEVLQAAWDATSTAITFVFHQRSHEEQR 736
>gi|355557962|gb|EHH14742.1| hypothetical protein EGK_00712 [Macaca mulatta]
Length = 705
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/762 (56%), Positives = 527/762 (69%), Gaps = 82/762 (10%)
Query: 1 RRSLAPSQLSKRSP-------ED-SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR P ED PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPGGGSSKDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK VH GVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDK---YVHWYF--------------GVKFLWECVT 152
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 153 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNE 212
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 213 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 272
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 273 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 332
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNR
Sbjct: 333 AHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSIVNR------------------- 373
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
+T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 374 ------LTPLQTELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIHDK 424
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 425 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSCSSDKVVLVSNY 480
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 481 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 540
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 541 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 600
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 601 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 660
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 661 LAQWNHCTDKRGLQDEVLQAAWDAASTAITFVFHQRSHEEQR 702
>gi|17508659|ref|NP_492438.1| Protein RAD-54 [Caenorhabditis elegans]
gi|6580248|emb|CAA22254.2| Protein RAD-54 [Caenorhabditis elegans]
Length = 818
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/757 (55%), Positives = 530/757 (70%), Gaps = 27/757 (3%)
Query: 3 SLAPS-QLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMS 61
S++PS Q +R + P I+ PPV E+ S PL V N D + ++ E S
Sbjct: 73 SVSPSKQGLRRRKKALPAIE---PPVSVEEAS-----PLRFV-NIDVFSRRMA---SESS 120
Query: 62 EHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLS 121
+H+ +I ++L++ F +P+ Y G S G RR + AL DP AL+LY P LS
Sbjct: 121 DHDAMIAKLLSRKFSIPMEGYMLSGRSLGLGGNRR---KCALFDPYHEGALILYAPEHLS 177
Query: 122 AHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
H LK DKD+ +VHVV DPV+ ILRPHQR+GVKFM++CVTG+ I + +GCIMADEMGL
Sbjct: 178 EHAQLKEDKDR-KVHVVADPVVGKILRPHQRDGVKFMWDCVTGINIPEFHGCIMADEMGL 236
Query: 182 GKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGS 241
GKTLQCI+L+WTLLRQ P A P + K+IIV PSSLVKNW EI KWLG R+ A+P+D G
Sbjct: 237 GKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVDSGK 296
Query: 242 KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
+ +I LNSFM R P+L+ISYETFR +A++LH +VG+V+CDEGHRLKN E+
Sbjct: 297 REQIIACLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNSENL 356
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
TYQAL GLK RRVL+SGTPIQNDLLEYFSLV+FVN G+LGTA EFRK++E IL+G+D+
Sbjct: 357 TYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKGRDA 416
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
AS ++ K E+ +++I +V +C+IRRTSALL+KYLPVK E ++C K + LQ+ LY L
Sbjct: 417 DASSEDQKKGEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLYNKL 476
Query: 422 IKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN-AMNILPT 480
I+ + R ++ + +ALS IT LKKLCNHP LV D+ Q + F N ++I P
Sbjct: 477 IECEKQNRIVEKDKGAT--ASALSFITHLKKLCNHPYLVYDEFQKPDNRFRNKCLSIFP- 533
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
S+ S K+ VLD +LAV + TTDDK VLVSNYTQT+D F L KLRGY
Sbjct: 534 ---ESFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMELCKLRGYD 590
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
+VRLDGSM+IK+R+K+V+TFN S F F+LSSKAGGCGLNLIGANRLVMFDPDWNPAN
Sbjct: 591 FVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNPAN 650
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
DDQAMARVWRDGQKK CF+YR L+TGSIEEKM QRQ HKKALSSCVVD EDVARHFS
Sbjct: 651 DDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHFSSE 710
Query: 660 ELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK-RWLVDP 718
+LR LF+LE SDTH+K+KC RC+ G++ PP +DC DLS W H + R + D
Sbjct: 711 QLRELFKLESTVASDTHEKLKCKRCIQGVESVDPPTNADCASDLSNWFHSQKSARKVADN 770
Query: 719 ILKHCWGAG-VSFVFYQHSTKAEKSKVVTEEEEKEEE 754
+L+ + G +SFVF+Q S E KV + EE +E+
Sbjct: 771 VLRAVFECGSISFVFHQKSHNVEVKKVQEKVEEVDED 807
>gi|268566403|ref|XP_002639713.1| C. briggsae CBR-RAD-54 protein [Caenorhabditis briggsae]
Length = 782
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/701 (57%), Positives = 505/701 (72%), Gaps = 16/701 (2%)
Query: 59 EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPP 118
E +H ++ ++L++ F +P+ Y G S G RR + AL DP AL+LY P
Sbjct: 83 ESCDHNAMVAKLLSRKFSIPMEGYMLSGRSLGLGGNRR---KCALFDPYHEGALILYAPE 139
Query: 119 QLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
QLS H LK DKD+ +VHVV DPV+ ILRPHQR+GVKFM++CVTGV I + +GCIMADE
Sbjct: 140 QLSEHAQLKEDKDR-KVHVVADPVVGKILRPHQRDGVKFMWDCVTGVNIPEYHGCIMADE 198
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKTLQCI+L+WTLLRQ P A P + K+IIV PSSLVKNW EI KWLG R+ A+P+D
Sbjct: 199 MGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVD 258
Query: 239 GGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
G + I LNSFM R P+L+ISYETFR +A++LH EVG+V+CDEGHRLKN
Sbjct: 259 SGKRELIIQCLNSFMSDSKMRCAIPVLIISYETFRLYANILHSGEVGIVICDEGHRLKNS 318
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
E+ TYQAL GLK RRVL+SGTPIQNDLLEYFSLV+FVN G+LGTA EFRK++E IL+G
Sbjct: 319 ENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKG 378
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+D+ AS ++ K E+ ++++ +V +C+IRRTSALL+KYLPVK E ++C K + LQ+ LY
Sbjct: 379 RDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLY 438
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN-AMNI 477
LI+ + R + + +ALS IT LKKLCNHP LV +++Q + F +++
Sbjct: 439 NKLIECEKQNRITEKDKGAT--ASALSFITHLKKLCNHPYLVYEELQKPDNRFRTKCLSV 496
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
P ++ S K+ VLD +LAV + TTDDK VLVSNYTQT+D F L KLR
Sbjct: 497 FPE----AFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMALCKLR 552
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY +VRLDGSM+IK+R+K+V+TFN S F F+LSSKAGGCGLNLIGANRLVMFDPDWN
Sbjct: 553 GYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWN 612
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PANDDQAMARVWRDGQKK CF+YR L+TGSIEEKM QRQ HKKALSSCVVD EDVARHF
Sbjct: 613 PANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVDAGEDVARHF 672
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK--RW 714
S +LR LF+LE + SDTH K+KC RC+ G++ PP+ +DCT DL+ W H +EK R
Sbjct: 673 SNEQLRELFKLESASASDTHSKLKCKRCIQGLESVDPPVNADCTSDLANWFH-SEKSARK 731
Query: 715 LVDPILKHCWGAG-VSFVFYQHSTKAEKSKVVTEEEEKEEE 754
+ D +L+ + G +SFVF+Q S E KV + EE +E+
Sbjct: 732 VADNVLRAVFECGSISFVFHQKSHNVEAKKVEEKIEELDED 772
>gi|341883705|gb|EGT39640.1| hypothetical protein CAEBREN_07872 [Caenorhabditis brenneri]
Length = 1092
Score = 795 bits (2053), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/714 (56%), Positives = 507/714 (71%), Gaps = 28/714 (3%)
Query: 59 EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPP 118
E S+H+ +I ++L++ F +P+ Y G S G RR + AL DP AL+LY P
Sbjct: 378 ESSDHDAMIAKLLSRKFSIPMEGYMLSGRSLGLGGNRR---KCALFDPYHEGALILYAPE 434
Query: 119 QLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
QLS H LK DKD+ +VHVV DPV+ ILRPHQREGVKFM++CVTGV I + +GCIMADE
Sbjct: 435 QLSEHAQLKEDKDR-KVHVVADPVVGKILRPHQREGVKFMWDCVTGVNIPEFHGCIMADE 493
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKTLQCI+L+WTLLRQ P A P + K+IIV PSSLVKNW EI KWLG R++A+P+D
Sbjct: 494 MGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLSAMPVD 553
Query: 239 GGSKAEI-----------DNKLN---SFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
G + +I NKL SFM R P+L+ISYETFR +A++LH EV
Sbjct: 554 SGKREQIIASLSESSVVLQNKLRFPASFMADSKMRCAIPVLIISYETFRLYANILHSGEV 613
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
G+V+CDEGHRLKN ++ TYQAL GLK RRVL+SGTPIQNDLLEYFSLV+FVN G+LGTA
Sbjct: 614 GIVICDEGHRLKNSDNLTYQALSGLKCVRRVLISGTPIQNDLLEYFSLVNFVNPGLLGTA 673
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
EFRK++E IL+G+D+ AS ++ K E+ ++++ +V +C+IRRTSALL+KYLPVK E
Sbjct: 674 SEFRKKFENAILKGRDADASSEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEH 733
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
++C K + LQ+ LY LI+ + R + + +ALS IT LKKLCNHP LV ++
Sbjct: 734 IICCKNSTLQETLYNKLIECEKQNRIAEKDKGA--TASALSFITHLKKLCNHPYLVYEEF 791
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYT 524
Q + F + + + S+ S K+ VLD +LAV + TTDDK VLVSNYT
Sbjct: 792 QKPDNRFRDK---CLSAFPESFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYT 848
Query: 525 QTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLI 583
QT+D F L KLRGY +VRLDGSM+IK+R+K+V+TFN S+ F F+LSSKAGGCGLNLI
Sbjct: 849 QTIDQFMALCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPSSSIFCFLLSSKAGGCGLNLI 908
Query: 584 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS 643
GANRLVMFDPDWNPANDDQAMARVWRDGQKK CF+YR L+TGSIEEKM QRQ HKKALSS
Sbjct: 909 GANRLVMFDPDWNPANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSS 968
Query: 644 CVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDL 703
CVVD EDVARHFS +LR LF+LE SDTH K+KC RC+ G++ PP+ +DC DL
Sbjct: 969 CVVDAGEDVARHFSNEQLRELFKLESTVASDTHTKLKCKRCIQGLESVDPPVTADCASDL 1028
Query: 704 SCWHHVTEK--RWLVDPILKHCWGAG-VSFVFYQHSTKAEKSKVVTEEEEKEEE 754
+ W H +EK R + D +L+ + G +SFVF+Q S E KV + EE +E+
Sbjct: 1029 ANWFH-SEKNARKVADNVLRAVYECGSISFVFHQKSHNVEAKKVEEKVEELDED 1081
>gi|308499699|ref|XP_003112035.1| CRE-RAD-54 protein [Caenorhabditis remanei]
gi|308268516|gb|EFP12469.1| CRE-RAD-54 protein [Caenorhabditis remanei]
Length = 1096
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/704 (56%), Positives = 501/704 (71%), Gaps = 22/704 (3%)
Query: 59 EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPP 118
E S+H+ +I ++L++ F +P+ Y G S G RR + AL DP AL+LY P
Sbjct: 393 ESSDHDAMIAKLLSRKFSIPMEGYMLSGRSLGLGGNRR---KCALFDPYHEGALILYAPE 449
Query: 119 QLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
+S H LK DKD+ +VHVV DPV+ ILRPHQR+GVKFM++CVTGV I + +GCIMADE
Sbjct: 450 LISEHAQLKEDKDR-KVHVVADPVVGKILRPHQRDGVKFMWDCVTGVNIPEYHGCIMADE 508
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKTLQCI+L+WTLLRQ P A P + K+IIV PSSLVKNW EI KWLG R+ A+P+D
Sbjct: 509 MGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLNAMPVD 568
Query: 239 GGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
G + I LNSFM R P+L+ISYETFR +A++LH +VG+V+CDEGHRLKN
Sbjct: 569 SGKRELIIASLNSFMADSKMRCAIPVLIISYETFRLYANILHSGDVGIVICDEGHRLKNS 628
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
++ TYQAL GLK RRVL+SGTPIQNDLLEYFSLV+FVN G+LGTA EFRK++E IL+G
Sbjct: 629 DNLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRKKFENAILKG 688
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+D+ AS ++ K E+ ++++ +V +C+IRRTSALL+KYLPVK E ++C K + LQ+ LY
Sbjct: 689 RDADASAEDQKKGEEKTKEMVSLVEKCIIRRTSALLTKYLPVKYEHIICCKNSTLQETLY 748
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
LI+ + R ++ + +ALS IT LKKLCNHP LV ++ Q + F N L
Sbjct: 749 NKLIECEKQNRIVEKDKGAT--ASALSFITHLKKLCNHPYLVYEEFQKPDNRFRN--KCL 804
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRG 538
P + ++ S K+ VLD +LAV + TTDDK VLVSNYTQT+D F L KLRG
Sbjct: 805 PV-FPEAFNPKSFDPSFSGKMKVLDYILAVTRKTTDDKFVLVSNYTQTIDQFMALCKLRG 863
Query: 539 YKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
Y +VRLDGSM+IK+R+K+V+TFN S+ F F+LSSKAGGCGLNLIGANRLVMFDPDWNP
Sbjct: 864 YDFVRLDGSMSIKQRSKIVDTFNDPSSTIFCFLLSSKAGGCGLNLIGANRLVMFDPDWNP 923
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE----EDVA 653
ANDDQAMARVWRDGQKK CF+YR L+TGSIEEKM QRQ HKKALSSCVV + E+
Sbjct: 924 ANDDQAMARVWRDGQKKTCFIYRLLATGSIEEKMFQRQTHKKALSSCVVSFKRYNNENSI 983
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK- 712
HF +LR LF+LE SDTH+K+KC RC+ G++ PP+ +DC DLS W H +EK
Sbjct: 984 YHFRNEQLRELFKLESTVASDTHEKLKCKRCIQGLESVDPPVNADCASDLSNWFH-SEKT 1042
Query: 713 -RWLVDPILKHCWGAG-VSFVFYQHSTKAEKSKVVTEEEEKEEE 754
R + D +L+ + G +SFVF+Q S E KV EEK EE
Sbjct: 1043 ARKVADNVLRAVFECGSISFVFHQKSHNVEAKKV----EEKVEE 1082
>gi|195550742|ref|XP_002076092.1| GD12001 [Drosophila simulans]
gi|194201741|gb|EDX15317.1| GD12001 [Drosophila simulans]
Length = 783
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/777 (51%), Positives = 525/777 (67%), Gaps = 41/777 (5%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC R+ LG++ D +
Sbjct: 2 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSE 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKI---------QVHVVVDPVLSNILRPHQREGVKFMYEC 161
ALVL+ PP + H+ + +D+ + + H+ P + L H R
Sbjct: 120 ALVLFHPPAYTEHERMGMDRPRSGARRRRSAAEQHIAAAPARGSAL--HVR--------- 168
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V G + GLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW
Sbjct: 169 VCGGKAGQLQWMHHGRRNGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWE 228
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
E TKWL GR+ LP++GG+K L F T R P+L+ISYETFR +A +L K
Sbjct: 229 KEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLISYETFRIYAEILCK 287
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
EVG+V+CDEGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +L
Sbjct: 288 YEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEML 347
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
GTA F++ +E+ ILRGQ++ +++AER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK
Sbjct: 348 GTAAVFKRNFESAILRGQNTDSTEAERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVK 407
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
E V+C K+T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+
Sbjct: 408 FEMVICAKLTAIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIY 466
Query: 462 DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
+K+ GFEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+S
Sbjct: 467 EKLTAREKGFENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLIS 522
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGL 580
NYTQTLDLFE+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGL
Sbjct: 523 NYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGL 582
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NLIGANRL MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+
Sbjct: 583 NLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKS 642
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT 700
LSS ++D E +HF+ +L+ LF + + +SDTHDK+KC RCV +Q+KPPP ++DCT
Sbjct: 643 LSSTIIDNNESAEKHFTRDDLKDLFTFDADILSDTHDKLKCKRCVQNVQMKPPPEDTDCT 702
Query: 701 DDLSCWHHVTEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
LS W+H + R L D IL W VSFVF+ S E EE + EE
Sbjct: 703 SHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAKEIVPSAEEEATDQPEE 759
>gi|391342370|ref|XP_003745493.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Metaseiulus occidentalis]
Length = 679
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/743 (52%), Positives = 510/743 (68%), Gaps = 75/743 (10%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEM 60
RRSLAPS+ S +P+ +KR +SR+ + + +
Sbjct: 2 RRSLAPSRRSTSTPD-------------AKKRRTSSRE-----------AEQENEAENPV 37
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
S+HE IR +LA+PF+VP+ N+ STK LG R+ + LHDP NALVL++P
Sbjct: 38 SDHEKFIRDLLARPFRVPLKNFVTSA-STKTLGRRKPVGPRPLHDPFEENALVLFSP--- 93
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
K + K VHVVVDP L+ +LRPHQREGVKFMY+C+TG +IE +YGCIMADEMG
Sbjct: 94 ------KPGQPKEIVHVVVDPNLTRVLRPHQREGVKFMYDCLTGAQIEGSYGCIMADEMG 147
Query: 181 LGKTLQCITLMWTLLRQGP-LAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
LGKTLQ IT++W+L+RQGP KP + KA+IV PSSLVKNW NE+ KWLG R + ++G
Sbjct: 148 LGKTLQTITVIWSLVRQGPTYGKPTVSKALIVTPSSLVKNWANELKKWLGDRARYVTLEG 207
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH-KNEVGLVLCDEGHRLKNC 298
GS +D+ + F+ R V PIL++SYET R H + L + VGL++CDEGHRLKN
Sbjct: 208 GSGKSVDDDIAGFLSN---RCV-PILILSYETLRLHIAALRDSSSVGLIVCDEGHRLKNS 263
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
++QTY++L LK RR+LLSGTPIQNDLLEYFSLVHFVN GILGT EFRK++E PILR
Sbjct: 264 DNQTYRSLNELKTPRRLLLSGTPIQNDLLEYFSLVHFVNNGILGTGAEFRKKFENPILRS 323
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+++ ++ +R+K E+L++L+GIVNRCLIRRT+ALLS+YLP+K E VVC +TD QK+ Y
Sbjct: 324 READSTADQRSKGQEKLDELVGIVNRCLIRRTNALLSQYLPIKHELVVCCNLTDAQKKAY 383
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
+ KS + TAL++IT+LKK+CNHP L ++ + ++ F+ +
Sbjct: 384 KDFSKS-----------YDQKDCTALAAITTLKKICNHPSLA-EESRAASEKFDPSQ--- 428
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRG 538
S K +LD +LA IK T++DK+VLVSNYTQT++LFE+L ++RG
Sbjct: 429 -----------------SGKFHILDGLLAAIKATSNDKVVLVSNYTQTMELFEQLCRMRG 471
Query: 539 YKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
Y Y RLDG+M+ KKR K+V FN S+E +F+LSSKAGGCGLN+IGANRLVMFDPDWNP
Sbjct: 472 YGYFRLDGTMSSKKRDKLVTQFNDVNSSEMVFLLSSKAGGCGLNIIGANRLVMFDPDWNP 531
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFS 657
A+D QAMARVWRDGQ+KPC+VYR +STGSIEEK+ QRQ HK LSS VVD RHFS
Sbjct: 532 ASDQQAMARVWRDGQRKPCYVYRLISTGSIEEKIFQRQTHKTILSSVVVDSSAQAERHFS 591
Query: 658 MSELRSLFQLEENTI-SDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK-RWL 715
++LR LF+L+E+ + S TH +IKCSRCVN IQV+PPP ++D + DLS WHH + K +
Sbjct: 592 TADLRDLFRLDEHELHSSTHSQIKCSRCVNNIQVRPPPDDADVSSDLSLWHHHSSKNHFT 651
Query: 716 VDPILKHCWGAGVSFVFYQHSTK 738
VD LK W GV+FVF Q+S K
Sbjct: 652 VDMALKKIWHFGVTFVFAQNSHK 674
>gi|194386250|dbj|BAG59689.1| unnamed protein product [Homo sapiens]
Length = 567
Score = 754 bits (1948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/571 (64%), Positives = 440/571 (77%), Gaps = 11/571 (1%)
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAA 234
MADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ KWLGGR+
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP 60
Query: 235 LPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGLV+CDEGHR
Sbjct: 61 LAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHR 120
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA EF+K +E P
Sbjct: 121 LKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELP 180
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
IL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ
Sbjct: 181 ILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ 240
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
ELY ++ + G K+ ++ LSSITSLKKLCNHP L+ DK DGF A
Sbjct: 241 TELYKRFLRQAKPAEELLEG---KMSVSPLSSITSLKKLCNHPALIYDKCVEEEDGFVGA 297
Query: 475 MNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQTLDLFE+L
Sbjct: 298 LDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLC 353
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFDP
Sbjct: 354 RARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDP 413
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E+DV
Sbjct: 414 DWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE 473
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT DL+ W+H T+K
Sbjct: 474 RHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAGWNHCTDKW 533
Query: 714 WLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L D +L+ W A ++FVF+Q S + ++
Sbjct: 534 GLRDEVLQAAWDAASTAITFVFHQRSHEEQR 564
>gi|3329473|gb|AAC26857.1| RAD54 DNA repair protein [Drosophila melanogaster]
Length = 628
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/611 (59%), Positives = 467/611 (76%), Gaps = 11/611 (1%)
Query: 148 RPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDK 207
RPHQREGV+FMYECV G R + GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+K
Sbjct: 1 RPHQREGVRFMYECVEGKR-GNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINK 59
Query: 208 AIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVI 267
AI+V+PSSLVKNW E TKWL GR+ LP++GG+K L F T R P+L+I
Sbjct: 60 AIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLI 118
Query: 268 SYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLL 327
SYETFR +A +L K EVG+V+CDEGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL
Sbjct: 119 SYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLT 178
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
EY+SLV+FVN +LGTA F++ +E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+I
Sbjct: 179 EYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCII 238
Query: 388 RRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSI 447
RRT+ +L+KYLPVK E V+C K+T +Q ELYTN +KSD VRR++ N K +TAL+ I
Sbjct: 239 RRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADC-NEKASLTALADI 297
Query: 448 TSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLA 507
T+LKK+C+HPDL+ +K+ GFEN+ N+LP+ +YK L ELS K M+LD MLA
Sbjct: 298 TTLKKICSHPDLIYEKLTAREKGFENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLA 353
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNE 566
I+ +DK+VL+SNYTQTLDLFE+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+
Sbjct: 354 AIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDS 413
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F+FMLSSKAGGCGLNLIGANRL MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GS
Sbjct: 414 FLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGS 473
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
IEEK++QRQ HKK+LSS ++D E +HF+ +L+ LF + N +SDTHDK+KC RCV
Sbjct: 474 IEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQ 533
Query: 687 GIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKV 744
IQ+KPPP ++DCT LS W+H + R L D IL W VSFVF+ H ++A++
Sbjct: 534 NIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFH-HRSQAQEIVP 592
Query: 745 VTEEEEKEEEE 755
EEE ++ E
Sbjct: 593 SAEEEATDQPE 603
>gi|326430759|gb|EGD76329.1| hypothetical protein PTSG_01031 [Salpingoeca sp. ATCC 50818]
Length = 752
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/743 (53%), Positives = 497/743 (66%), Gaps = 30/743 (4%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPP--PVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKE 58
RRS APS L+KR G K PP P E+R + K G+ ED+
Sbjct: 2 RRSHAPSYLAKRRAAPVMGSKARPPKSPNTGEERQ-DAEKENGATPPEDD---------- 50
Query: 59 EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPP 118
HE I+++L +PFKVPI Y G LGVRR RKALHDP A A+VLYTPP
Sbjct: 51 ----HEVRIKRLLQRPFKVPIPGYQGSSSGRVGLGVRRPTVRKALHDPEADGAVVLYTPP 106
Query: 119 QLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
+L+A K +K VHVVVDP+L LRPHQ EGV+F++ VTGV IE GCIMADE
Sbjct: 107 ELTAEQATKTFGEKRPVHVVVDPILGTKLRPHQVEGVQFLWNAVTGVNIEGFNGCIMADE 166
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKT QC+TL+WTLL Q P +P +KAIIV PSSLVKNW NE KWLG R++ L +D
Sbjct: 167 MGLGKTFQCVTLVWTLLTQSPDCRPTTNKAIIVCPSSLVKNWYNEFGKWLGNRISPLAVD 226
Query: 239 GGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
G + ++ ++ F+ GR +P+L++SYE R +A +L +G+V+CDEGHRLKN
Sbjct: 227 SG-RDDMKRQMERFVSATGRVQ-HPVLILSYEALRLNADILCVKPIGIVICDEGHRLKNS 284
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+SQTY++LM LK RR++LSGTPIQN+LLEY++LV F N G+LG+A EFRK++E PILR
Sbjct: 285 QSQTYKSLMQLKTARRIILSGTPIQNELLEYYALVEFCNPGLLGSAGEFRKRFENPILRS 344
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+DS A+D E +RL ++ IVNRC+IRRT+ +LSKYLP K EQVVC + T+LQ E+Y
Sbjct: 345 RDSLATDKELEIGAQRLAEMTEIVNRCVIRRTNDILSKYLPPKIEQVVCCRPTNLQMEMY 404
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
++ + MK + T G ++L+ IT LKKLCNHP L+ DKI + A L
Sbjct: 405 KAMLGAK-----MKRKDGTVTG-SSLAFITELKKLCNHPQLLHDKIAGKGKTKDKAFGAL 458
Query: 479 -PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
P +L +LS KL VLD +LA IKM T DKIVLVSNYTQTL+LF L LR
Sbjct: 459 DPFLPQLKPSMQRLQPQLSGKLAVLDCLLATIKMQTTDKIVLVSNYTQTLELFTTLCALR 518
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY+YVRLDGSMTIK+R K+V+ FN TS++FIFMLSSKAGGCGLNLIGANRLVMFDPDWN
Sbjct: 519 GYQYVRLDGSMTIKRRQKIVDRFNDPTSSDFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 578
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PAND+QAMARVWRDGQ K CFVYRF++TG+IEEK++QRQAHKKALS CVVD DV RHF
Sbjct: 579 PANDEQAMARVWRDGQTKLCFVYRFVTTGTIEEKILQRQAHKKALSQCVVDDGLDVERHF 638
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCV--NGIQVKPPPLE-SDCTDDLSCWHHVTEKR 713
S ++LR LF L++ S TH + KC RC + PP E DL+ W H +
Sbjct: 639 SKNDLRELFVLDDKCTSSTHMQFKCRRCSKDGTYSLIPPTGEVKGIPQDLAEWDHYPLGK 698
Query: 714 WLVDPILKHCWGAGVSFVFYQHS 736
+ D +L G VSFVF S
Sbjct: 699 NIKDKVLAAAAGKTVSFVFRAQS 721
>gi|119627334|gb|EAX06929.1| RAD54-like (S. cerevisiae), isoform CRA_a [Homo sapiens]
Length = 567
Score = 741 bits (1912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/571 (64%), Positives = 441/571 (77%), Gaps = 11/571 (1%)
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAA 234
MADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ KWLGGR+
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQP 60
Query: 235 LPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGLV+CDEGHR
Sbjct: 61 LAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGSVGLVICDEGHR 120
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA EF+K +E P
Sbjct: 121 LKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELP 180
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
IL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ
Sbjct: 181 ILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ 240
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK DGF A
Sbjct: 241 TELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIYDKCVEEEDGFVGA 297
Query: 475 MNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQTLDLFE+L
Sbjct: 298 LDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKLC 353
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFDP
Sbjct: 354 RARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDP 413
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E+DV
Sbjct: 414 DWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE 473
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT DL+ W+H T+K
Sbjct: 474 RHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAGWNHCTDKW 533
Query: 714 WLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L D +L+ W A ++FVF+Q S + ++
Sbjct: 534 GLRDEVLQAAWDAASTAITFVFHQRSHEEQR 564
>gi|320169825|gb|EFW46724.1| DNA repair protein RAD54 [Capsaspora owczarzaki ATCC 30864]
Length = 941
Score = 739 bits (1909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/630 (56%), Positives = 460/630 (73%), Gaps = 11/630 (1%)
Query: 58 EEMSEHENLIRQILAKPFKVPILNYTGGGY-STKALGVRREGARKALHDPTAPNALVLYT 116
+ +++HE+ I IL KPFKVP+ N G Y + LG+R+ R ALH P ALVL+
Sbjct: 176 QALADHESRIGSILTKPFKVPLAN--GENYIPARGLGMRKPLVRCALHSPDDEGALVLFA 233
Query: 117 PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMA 176
P + SA L +D +VHVVVDP+L+ +LR HQREGVKF+Y+ V G +E GCIMA
Sbjct: 234 PEKTSA---LPLDPKTKEVHVVVDPMLTKVLRLHQREGVKFLYDAVMGDIVEGYQGCIMA 290
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP 236
DEMGLGKTLQC++L+WTLLRQG P I+KA+I+ P+SLVKNW NE+ KWL G+V +LP
Sbjct: 291 DEMGLGKTLQCVSLIWTLLRQGRNGMPTIEKAVIICPASLVKNWHNELQKWLQGKVQSLP 350
Query: 237 IDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
+DGG K +I++ LN+F+ GR PIL+ISYETFR H +L VGLV+CDEGHRLK
Sbjct: 351 VDGGDKEKIESNLNNFINCTGRLLNQPILIISYETFRIHVDILASKPVGLVICDEGHRLK 410
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N +SQT+QAL LK RRVLLSGTPIQNDL EYFSL+ F N G+LGT EFR+++E PIL
Sbjct: 411 NAQSQTFQALNQLKTDRRVLLSGTPIQNDLTEYFSLLLFTNPGLLGTQAEFRRRFENPIL 470
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
RG+++ A+D E+ E+L++L IVN+ +IRRT++LLSKYLP K +QVVCIK++ LQ +
Sbjct: 471 RGREASATDKEKEIGTEKLQELAKIVNKFIIRRTNSLLSKYLPTKVDQVVCIKLSPLQTQ 530
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
LY LIKS AV++ + + +L SIT LKKLCNHPDL+ + Q + F +
Sbjct: 531 LYEALIKSKAVKKLIASSASDGQTAASLGSITLLKKLCNHPDLIYEACQ---ENFRELLP 587
Query: 477 ILPTGYAASYKSGKLLIEL-SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
+ P Y K G+ S K VLDTMLA +K TT+D++VL+SNYTQT+DLFE L++
Sbjct: 588 LFPPEYGVKNKRGRTFNPAHSGKFQVLDTMLAYVKSTTNDRVVLISNYTQTIDLFEDLAR 647
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
LRGY++VRLDG++++K R K+V+ FN +SN F+F+LSSKAGGCG+NLIG NRLV+FDPD
Sbjct: 648 LRGYRFVRLDGTLSVKARQKLVDEFNNPSSNVFLFLLSSKAGGCGINLIGGNRLVLFDPD 707
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNPA+D QAMARVWRDGQKK ++YRFL TG+IEEK+ QRQAHK ALSSCVVD EE+V R
Sbjct: 708 WNPASDGQAMARVWRDGQKKKVYLYRFLGTGTIEEKIFQRQAHKMALSSCVVDEEENVER 767
Query: 655 HFSMSELRSLFQLEENTISDTHDKIKCSRC 684
HF+ LR LF L T SDTHD+ C C
Sbjct: 768 HFTSENLRDLFTLNNTTSSDTHDRFNCEPC 797
>gi|358340990|dbj|GAA48772.1| DNA repair and recombination protein RAD54 and RAD54-like protein,
partial [Clonorchis sinensis]
Length = 614
Score = 739 bits (1908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/556 (63%), Positives = 432/556 (77%), Gaps = 7/556 (1%)
Query: 196 RQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
RQGP AKP IDKA++V PSSLVKNW NE KWL G+V L ID GSK EID KL +F+
Sbjct: 59 RQGPEAKPTIDKAVVVTPSSLVKNWYNEFYKWLQGKVHPLTIDSGSKEEIDTKLATFLAQ 118
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
GRR P+L+ISYETFR H+S LHK EVGLVLCDEGHRLKN E+QTYQAL+ L RRV
Sbjct: 119 SGRRIPTPVLIISYETFRLHSSALHKGEVGLVLCDEGHRLKNSENQTYQALVQLNCSRRV 178
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
LLSGTPIQNDLLEYFSLVHFVN G+LGTA +FR+++ETPILRG+D+ A++ ++ K E+L
Sbjct: 179 LLSGTPIQNDLLEYFSLVHFVNMGLLGTAADFRRRFETPILRGRDADATEDDQKKGEEKL 238
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI----KSDAVRRTM 431
++L+ IVNRC+IRRT ALL+KYLPVK EQVVC +T +Q+ +Y + + + A R +M
Sbjct: 239 QELLVIVNRCIIRRTQALLTKYLPVKIEQVVCCSLTPVQRMVYADFVARKAREVAARLSM 298
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK- 490
G L +++L+SIT LKKLCNHPDLV DK+ T +DGF +A+ P Y S +S
Sbjct: 299 DSGRGPALSVSSLASITHLKKLCNHPDLVYDKMATNSDGFVDALAHFPRDYRGSLESNAP 358
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
+LS K VLD +LA+I+ TT DK+VL+SNYTQTLDLFERL +RGY YVRLDG+MTI
Sbjct: 359 FRPDLSGKFQVLDYLLALIRTTTSDKVVLISNYTQTLDLFERLCSMRGYIYVRLDGTMTI 418
Query: 551 KKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
KKRAK+VE FN TS EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWR
Sbjct: 419 KKRAKIVERFNDPTSQEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWR 478
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
DGQKK C++YR +STG+IEEKM+QRQAHKKALSSCVVD +E+V RHFS+ +L+ LF
Sbjct: 479 DGQKKECYIYRLISTGTIEEKMLQRQAHKKALSSCVVDQQEEVERHFSLGDLKELFTFHV 538
Query: 670 NTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAG-V 728
+T+SDTHD+ KC RCVN +Q+KPPP +SDC DLS W+H K+ L D ILK W G +
Sbjct: 539 DTVSDTHDRFKCRRCVNQVQIKPPPPDSDCNCDLSMWNHCYGKKLLNDVILKSTWDTGAI 598
Query: 729 SFVFYQHSTKAEKSKV 744
SFVF+ +S + ++ V
Sbjct: 599 SFVFWHYSHEQQRLTV 614
>gi|149035611|gb|EDL90292.1| rCG50332, isoform CRA_c [Rattus norvegicus]
Length = 568
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/571 (64%), Positives = 439/571 (76%), Gaps = 11/571 (1%)
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAA 234
MADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE+ KWLGGR+
Sbjct: 1 MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQP 60
Query: 235 LPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K VGLV+CDEGHR
Sbjct: 61 LAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVEVLKKGNVGLVICDEGHR 120
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA EF+K +E P
Sbjct: 121 LKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELP 180
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
IL+ +D+ AS+A+R ERL +LI IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ
Sbjct: 181 ILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQ 240
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK DGFE
Sbjct: 241 TELYKRFLRQAKPEEELHEG---KMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGT 297
Query: 475 MNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
+ I P G Y S + +LS K++VLD +LA+ + + DK+VLVSNYTQTLDLFE+L
Sbjct: 298 LGIFPPG----YNSKAVEPQLSGKMLVLDYILAMTRSRSSDKVVLVSNYTQTLDLFEKLC 353
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFDP
Sbjct: 354 RARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDP 413
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E+DV
Sbjct: 414 DWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVE 473
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT DL+ W+H T+KR
Sbjct: 474 RHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSDLAQWNHNTDKR 533
Query: 714 WLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L D +L+ W A ++FVF+Q S + ++
Sbjct: 534 GLQDEVLQAAWDASSTAITFVFHQRSHEEQR 564
>gi|167527295|ref|XP_001747980.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773729|gb|EDQ87367.1| predicted protein [Monosiga brevicollis MX1]
Length = 760
Score = 733 bits (1892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/771 (51%), Positives = 504/771 (65%), Gaps = 49/771 (6%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTK--- 57
RRSLAPS +RS P ++ P V C DN D+ +S P K
Sbjct: 2 RRSLAPS---RRSLGPVPRKRSIAPTVGGSSPGC---------DNGDDSDSGSPQPKVHL 49
Query: 58 ----------------EEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARK 101
E ++ HE I IL KPFK P+ +T S + LGVRR R+
Sbjct: 50 PPFMADRKPLTPLNGNEVITAHEARIFGILGKPFKSPLPGHTTDN-SRRGLGVRRLTLRQ 108
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKID-KDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
LHDP A+VLY PP LSA D + ++K V VVVDP+L LRPHQ EGV+F+Y+
Sbjct: 109 PLHDPDDDAAVVLYRPPPLSAADASNPEIRNKHPVAVVVDPILGAKLRPHQIEGVQFLYD 168
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
CVTG++I +G IMAD MGLGKTLQ +TL WTLL+Q P +P + KA+IV PSSLVKNW
Sbjct: 169 CVTGLKIPGYHGAIMADGMGLGKTLQNVTLTWTLLKQSPECRPTLTKAVIVCPSSLVKNW 228
Query: 221 CNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
NE KWLG RV+ LPID G+ EID KL F GR +L+ISYET R H L
Sbjct: 229 SNEFRKWLGDRVSTLPIDNGASDEIDKKLRYFGSASGRAAPQ-VLIISYETLRGHIHALD 287
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
+ VG+V+CDEGHRLKN E+QTY+ALM LK +RRV+LSGTP+QN+LLEY++L+ FVN G+
Sbjct: 288 Q-PVGIVICDEGHRLKNSENQTYRALMALKTERRVILSGTPVQNELLEYYALLEFVNPGL 346
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG+A EFRK++E PILRG+D+ A+ E+ +L +++ +VNRCLIRRTS +LSKYLP
Sbjct: 347 LGSAGEFRKKFEIPILRGRDADATAQEQELGQTKLNEMVELVNRCLIRRTSDILSKYLPP 406
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL------GMTALSSITSLKKLC 454
K E VVC ++T LQ ++Y LI S A+ G T G T L+ IT LKKLC
Sbjct: 407 KIEAVVCCRLTGLQLDMYKRLIDSQAIALEDDGPGKTNQKKSGGSGPTPLAFITHLKKLC 466
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
NHP+L+MDKIQ GF +++P A + S + E S K+MV+D MLA++K TTD
Sbjct: 467 NHPELIMDKIQAREPGFAKLQDLVP----AKWDSRVVSPEWSGKVMVVDAMLAMLKSTTD 522
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSS 573
+K+VL+SNYTQTLDLFERL + R YKYVRLDG+M+IKKR KVV+ FN S++FIFMLSS
Sbjct: 523 EKVVLISNYTQTLDLFERLCRQRRYKYVRLDGTMSIKKRQKVVDHFNAPDSDDFIFMLSS 582
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGGCG+NLIGA+RL++ DPDWNPA+D QA+AR WRDGQ++ +VYR ++TG+IEEK++
Sbjct: 583 KAGGCGINLIGASRLILTDPDWNPASDAQALARCWRDGQRRITYVYRLVATGTIEEKILA 642
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV-NGIQ--V 690
RQAHK ALS CV+D EDV RHFS+++LR LF L E T SD H + KC RC +G +
Sbjct: 643 RQAHKTALSDCVIDEAEDVQRHFSLADLRRLFTLNEGTTSDLHAQFKCGRCSRDGTYALI 702
Query: 691 KPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
KP D S W H + + D IL G +SFVF S +A K
Sbjct: 703 KPDGKPMGIPSDFSQWDHYPLGKGVKDRILSEAGGDLISFVFRAQSHEAGK 753
>gi|402588718|gb|EJW82651.1| hypothetical protein WUBG_06439, partial [Wuchereria bancrofti]
Length = 591
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/573 (60%), Positives = 443/573 (77%), Gaps = 9/573 (1%)
Query: 55 MTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVL 114
+ ++E HE +I ++L++PFK+PI +Y G + + LG+R R AL DP + ALVL
Sbjct: 25 LMQKERGFHEEMISRLLSRPFKIPIPDYRSPGRA-RPLGLRHSTVRCALFDPYSEGALVL 83
Query: 115 YTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCI 174
+TPP+LSAHD LK+D QVHVVVDP LS +LRPHQREGVKFMY+CVTGVRI A+GCI
Sbjct: 84 FTPPELSAHDALKLDTTNKQVHVVVDPTLSAVLRPHQREGVKFMYDCVTGVRIPSAHGCI 143
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAA 234
MADEMGLGKTLQCITLMWTLLRQGP AKP ++KA+IV PSSLVKNW EI KWLGGRV A
Sbjct: 144 MADEMGLGKTLQCITLMWTLLRQGPDAKPTLNKAVIVCPSSLVKNWDKEIRKWLGGRVNA 203
Query: 235 LPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
LP+D G K EID L FM G R P+L+ISYETFR HAS+L + E+GL++CDEGHR
Sbjct: 204 LPVDSGGKDEIDRNLEKFMSQMGVRCPTPVLIISYETFRLHASILLQKEIGLIICDEGHR 263
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN ++QTYQAL GLK +RR+L+SGTPIQNDLLEY+SL++FVN G+LGTA EF++++E
Sbjct: 264 LKNSDNQTYQALFGLKCERRILISGTPIQNDLLEYYSLINFVNPGLLGTASEFKRRFENI 323
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
ILRG+D+ A+DA+R K + L ++ IV++C+IRRTSALL+KYLPVK E ++C K+T+LQ
Sbjct: 324 ILRGRDADATDAQREKGDTALTEMSSIVSKCIIRRTSALLTKYLPVKYELIICCKLTELQ 383
Query: 415 KELYTNLIKSDAV--RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
++LY LI + ++ ++ + G+ K+ TALS IT+LKKLCNHP L+++K Q +GFE
Sbjct: 384 EKLYNQLISAFSMGGKQKVTEGKCDKITGTALSFITNLKKLCNHPQLILNKCQKKEEGFE 443
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
+ + + P + ++ S K+ VLD +LA + TT+DK +LVSNYTQT+D F
Sbjct: 444 DCLKLFPGDFGKKFEPA-----FSGKMKVLDYLLAATRATTNDKFILVSNYTQTIDAFVE 498
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L +LR Y Y+RLDG+ TIK+RAK+VE FN S E++F+LSSKAGGCGLNLIGANRL+MF
Sbjct: 499 LCQLRRYPYIRLDGTCTIKQRAKLVEKFNDPESIEYVFLLSSKAGGCGLNLIGANRLIMF 558
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
DPDWNPANDDQAMARVWRDGQKK CF+YR LS
Sbjct: 559 DPDWNPANDDQAMARVWRDGQKKNCFIYRLLSV 591
>gi|313233227|emb|CBY24342.1| unnamed protein product [Oikopleura dioica]
Length = 1202
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/681 (53%), Positives = 471/681 (69%), Gaps = 35/681 (5%)
Query: 63 HENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSA 122
HE+ I+ L++PFK+ I Y +S K LG R G R+ L+DP P+AL+ Y PP L+
Sbjct: 76 HEDFIKNCLSRPFKMVIKGYF---FSGKPLGARSGGIRRPLYDPEDPHALIFYAPPFLTE 132
Query: 123 HDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLG 182
LK+D KI VHV++DP LS +LRPHQR GVKF+Y+CVTG IE GCIMAD+MGLG
Sbjct: 133 TQKLKVDMSKIPVHVLLDPRLSRVLRPHQRAGVKFLYDCVTGKAIEGYNGCIMADDMGLG 192
Query: 183 KTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSK 242
KTLQC+ L+WTL+RQGP KP+ I+++PSSLVKNW NE KWLG V+ + IDGG K
Sbjct: 193 KTLQCVALIWTLVRQGPDCKPIAPLTIVISPSSLVKNWQNEFKKWLGDEVSTVAIDGGGK 252
Query: 243 AEIDNKLNSF--MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+ID KL +F Q GR P+L ISYETFR HA VL+K +GL++CDEGHRLKN +S
Sbjct: 253 KDIDKKLEAFCSQQILGRVHT-PVLFISYETFRLHAKVLNKRPIGLMICDEGHRLKNPDS 311
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
QTY AL L+ RRVLLSGTPIQNDLLEY+SLVHFVN+ +LGT+ +FRK+YE PIL+ +D
Sbjct: 312 QTYLALDKLECPRRVLLSGTPIQNDLLEYYSLVHFVNRNLLGTSADFRKEYENPILKSRD 371
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ +D E+ K +++++L+ +VNRC+IRRT+ +LSKYLP K E V+ I + QK Y
Sbjct: 372 ADCTDKEKQKGQDKIKKLLEVVNRCMIRRTNDILSKYLPPKVEMVITIPLIGNQKASYIK 431
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
+K +G + G ++L +IT+LKKLCNHP LV I F + P
Sbjct: 432 FVKEKKRLLDTEGMQ----GPSSLQAITALKKLCNHPALVYPLINNPEYKF-----LQP- 481
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
Y +K K LS K ++LD +LA+ KM TDDK VLVSNYTQTLD + L KLRGY
Sbjct: 482 -YYKDFKPDKFDPTLSGKFLLLDLILAITKMHTDDKFVLVSNYTQTLDTCQELCKLRGYG 540
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
YVRLDG+M IKKR+K+V FN S++++FMLSSKAGGCGLNLIGANRL+MFDPDWNPAN
Sbjct: 541 YVRLDGTMAIKKRSKLVAEFNSPESSDYVFMLSSKAGGCGLNLIGANRLIMFDPDWNPAN 600
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE-DVARHFSM 658
DDQAMARVWRDGQKK CF+YR ++ G+IEEKM+QRQ HKKALS VVD +E D AR FS
Sbjct: 601 DDQAMARVWRDGQKKRCFIYRLVAAGTIEEKMLQRQLHKKALSGVVVDAQEADDARRFSS 660
Query: 659 SELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDP 718
++++ +F +E T S H+ +KC RC + D T DL W H ++ R+ D
Sbjct: 661 TDMKEIFSYKE-TSSSIHESLKCKRC-----------QGDGT-DLGTWGHASQARFCPDI 707
Query: 719 ILKHCWGAG---VSFVFYQHS 736
+LK W +SF+F++ S
Sbjct: 708 VLKKSWERQKDIISFLFHKQS 728
>gi|297665071|ref|XP_002810938.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Pongo abelii]
Length = 683
Score = 689 bits (1777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/758 (50%), Positives = 479/758 (63%), Gaps = 96/758 (12%)
Query: 1 RRSLAPSQLSKRSPE-----DSPGIKTFPPPVKKEKRSCTS---------RKPLGSVDNE 46
RRSLAPSQL+KR PE D P K++ S T RKPL + N+
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPDLVTPGKRKSSSETQIQECFLSPFRKPLSQLTNQ 61
Query: 47 DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+ALHDP
Sbjct: 62 P------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRALHDP 112
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
+ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT R
Sbjct: 113 LEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRR 172
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
I ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE+ K
Sbjct: 173 IPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGK 232
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR HA VL K VGL
Sbjct: 233 WLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHAGVLQKGSVGL 292
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA E
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK EQVV
Sbjct: 353 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 413 CCRLTPLQTELYKRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPALIHDKCVE 469
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQT
Sbjct: 470 EEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQT 525
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGAN 586
LDLFE+L + R Y YVRLD +IKKRAKVVE FN+T E IF S ++
Sbjct: 526 LDLFEKLCRARRYLYVRLDDPXSIKKRAKVVERFNRTIEEKIFQRQSHKKALSSCVV--- 582
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
+++Q + R + G+ K F+ S +++ R+ CV
Sbjct: 583 ------------DEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRR--------CV- 621
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCW 706
N Q++PPP SDCT DL+ W
Sbjct: 622 ---------------------------------------NSRQIRPPPDGSDCTSDLAQW 642
Query: 707 HHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 643 NHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 680
>gi|195342153|ref|XP_002037666.1| GM18177 [Drosophila sechellia]
gi|194132516|gb|EDW54084.1| GM18177 [Drosophila sechellia]
Length = 717
Score = 667 bits (1720), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/562 (56%), Positives = 420/562 (74%), Gaps = 9/562 (1%)
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
QGP KP I+KAI+V+PSSLVKNW E TKWL GR+ LP++GG+K L F T
Sbjct: 138 QGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMTS 197
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
R P+L+ISYETFR +A +L + +VG+V+CDEGHRLKN ++ TYQALMGLK KRRVL
Sbjct: 198 ARLGT-PVLLISYETFRIYAEILCQYQVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVL 256
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQNDL EY+SLV+FVN +LGTA F++ +E+ ILRGQ++ +++AER +A E+ +
Sbjct: 257 LSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEAERQRAIEKTQ 316
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+LIG+V++C+IRRT+ +L+KYLPVK E V+C K+T +Q ELYTN +KSD VRR++ N
Sbjct: 317 ELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADC-N 375
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
K +TAL+ IT+LKK+C+HPDL+ +K+ GFEN+ N+LP+ +YK L ELS
Sbjct: 376 EKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPS----NYKPKDLNPELS 431
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
K M+LD MLA I+ +DK+VL+SNYTQTLDLFE+L++ R Y +VRLDG+M+IKKR+KV
Sbjct: 432 GKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKV 491
Query: 557 VETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
V+ FN S+ F+FMLSSKAGGCGLNLIGANRL MFDPDWNPAND+QAMARVWRDGQKKP
Sbjct: 492 VDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKP 551
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT 675
C++YR +++GSIEEK++QRQ HKK+LSS ++D E +HF+ +L+ LF + + +SDT
Sbjct: 552 CYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDADILSDT 611
Query: 676 HDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCW--GAGVSFVFY 733
HDK+KC RCV +Q+KPPP ++DCT LS W+H + R L D IL W VSFVF+
Sbjct: 612 HDKLKCKRCVQNVQIKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFH 671
Query: 734 QHSTKAEKSKVVTEEEEKEEEE 755
S E EE + EE
Sbjct: 672 HRSQAKEIVPSAEEEATDQPEE 693
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 78/170 (45%), Gaps = 31/170 (18%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC R+ LG++ D +
Sbjct: 19 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSE 76
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALH--DPTA 108
LP+ SE+E I ++LA+ FKVP+ NY ++ GVR ALH DPT
Sbjct: 77 LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRSWGVR------ALHSRDPTR 130
Query: 109 PNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
+ P+ K I +VV P S++++ ++E K++
Sbjct: 131 SMDCNAWQGPEC---------KPTINKAIVVSP--SSLVKNWEKEFTKWL 169
>gi|242790191|ref|XP_002481516.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
gi|218718104|gb|EED17524.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces stipitatus ATCC
10500]
Length = 808
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/678 (51%), Positives = 449/678 (66%), Gaps = 56/678 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F VP++N T GGY LG+RR GA K LHDP+ A+VLY P
Sbjct: 107 FSVPLINKTSGGYDPSRPAPTLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDDKPAMKT 165
Query: 118 ----------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGVKF 157
P+L S D+L + K D+ +V VV+DP L+ ILRPHQ EGVKF
Sbjct: 166 IEAESTAEEPPKLDEPLVHKSLADILGLRKQVEDRPKVPVVIDPRLAKILRPHQIEGVKF 225
Query: 158 MYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSL 216
+Y C TG+ E+A GCIMADEMGLGKTLQCI+LMWTLL+Q P A K + K +I PS+L
Sbjct: 226 LYRCTTGMIDENANGCIMADEMGLGKTLQCISLMWTLLKQSPEAGKTTVQKCVIACPSTL 285
Query: 217 VKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
V+NW NE+ KWLG V IDG +KAE+ ++L + GR V P+L++SYET R
Sbjct: 286 VRNWANELVKWLGPDAVIPFVIDGKATKAELSSQLKQWAIASGRAIVRPVLIVSYETLRL 345
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
+ L +GL+LCDEGHRLKN ES T++ L L RRV+LSGTPIQNDL EYF+LVH
Sbjct: 346 NIEDLRDTPIGLLLCDEGHRLKNKESLTWKELNSLNVSRRVILSGTPIQNDLSEYFALVH 405
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
F N +LG+ EFRK++E PILRG+D+ ASD +R K +ERL +L IVN+ +IRRT+ +L
Sbjct: 406 FANPNLLGSQNEFRKRFEIPILRGRDAAASDEDRKKGDERLAELSTIVNKFIIRRTNDIL 465
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
SKYLP+K E VV +++ Q LY ++S +R ++G G L +I LKKLC
Sbjct: 466 SKYLPIKYEHVVFCNLSEFQLNLYNYFLQSPEIRSLLRGK-----GSQPLKAIGLLKKLC 520
Query: 455 NHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
NHPDL+ + + G + + + P G + + S K+MVLD MLA I+ T
Sbjct: 521 NHPDLLDLSRDLPGCEQYFPDDYVPPDGRG---RDRDIKSWYSGKMMVLDRMLARIRQDT 577
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLS 572
+DKIVL+SNYTQTLDLFE+L + R Y +RLDG+M + KR K+V+ FN EF+F+LS
Sbjct: 578 NDKIVLISNYTQTLDLFEKLCRARAYGCLRLDGTMNVNKRQKLVDKFNDPNGEEFVFLLS 637
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+
Sbjct: 638 SKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIF 697
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-V 690
QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + +T SDTHD KC RC +GIQ +
Sbjct: 698 QRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTRSDTHDTFKCKRCRPDGIQHI 757
Query: 691 KPPPLESDCTDDLSCWHH 708
K P + D S W+H
Sbjct: 758 KAPAI---LYGDTSTWNH 772
>gi|212534456|ref|XP_002147384.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
gi|210069783|gb|EEA23873.1| dsDNA-dependent ATPase Rad54, putative [Talaromyces marneffei ATCC
18224]
Length = 808
Score = 657 bits (1695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/680 (51%), Positives = 444/680 (65%), Gaps = 60/680 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F +P++N T GGY LG+RR GA K LHDP+ A+VLY P
Sbjct: 107 FAIPLMNKTSGGYDPSRPAPTLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDDKPVKKT 165
Query: 118 ----------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGVKF 157
P+L S D+L + K D+ +V VV+DP LS ILRPHQ EGVKF
Sbjct: 166 IATETTAEEPPKLDEPLVHKSLADILGLKKQVEDRPKVPVVIDPRLSKILRPHQIEGVKF 225
Query: 158 MYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSL 216
+Y C TG+ E+A GCIMADEMGLGKTLQCI+LMWTLL+Q P A + + K +I PS+L
Sbjct: 226 LYRCTTGMIDENANGCIMADEMGLGKTLQCISLMWTLLKQSPEAGRTTVQKCVIACPSTL 285
Query: 217 VKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
V+NW NE+ KWLG V IDG +KAE+ ++L + GR V P+L++SYET R
Sbjct: 286 VRNWANELVKWLGPDAVTPFVIDGKATKAELSSQLKQWAIASGRSIVRPVLIVSYETLRL 345
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
+ L +GL+LCDEGHRLKN ES T++ L L RRV+LSGTPIQNDL EYF+LVH
Sbjct: 346 NVEDLKDTPIGLLLCDEGHRLKNKESLTWKELNSLNVSRRVILSGTPIQNDLSEYFALVH 405
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
F N +LG+ EFRK++E PILRG+D+ ASD +R K +ERL +L IVN+ +IRRT+ +L
Sbjct: 406 FANPNLLGSQNEFRKKFEIPILRGRDAAASDEDRKKGDERLSELSAIVNKFIIRRTNDIL 465
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
SKYLP+K E VV +++ Q LY + + S +R ++G G L +I LKKLC
Sbjct: 466 SKYLPIKYEHVVFCNLSEFQLNLYNHFLSSPEIRSLLRGK-----GSQPLKAIGLLKKLC 520
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKM 511
NHPDL+ A P Y G+ + S K+MVLD MLA I+
Sbjct: 521 NHPDLL-----DLARDLPGCEQYFPDDYVPPDGRGRDRDIKSWYSGKMMVLDRMLARIRQ 575
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
T+DKIVL+SNYTQTLDLFE+L + R Y +RLDG+M + KR K+V+ FN EFIF+
Sbjct: 576 DTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPNGEEFIFL 635
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK
Sbjct: 636 LSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEK 695
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + +T SDTHD KC RC +G Q
Sbjct: 696 IFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTRSDTHDTFKCKRCRPDGTQ 755
Query: 690 -VKPPPLESDCTDDLSCWHH 708
+K P + D S W+H
Sbjct: 756 HIKAPAI---LYGDTSTWNH 772
>gi|322701898|gb|EFY93646.1| recombinational repair protein [Metarhizium acridum CQMa 102]
Length = 819
Score = 657 bits (1694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/717 (50%), Positives = 454/717 (63%), Gaps = 66/717 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+ K F VP+ + Y+ LG+R+ + + LHDP+ A+VLY P
Sbjct: 54 VFRKAFSVPLKDKDAASYNPNRPPPTLGLRQGAVVSPRPLHDPSGEFAIVLYDPTVDGKT 113
Query: 118 ------------------PQLSA---HDLL--------KIDKDKIQVHVVVDPVLSNILR 148
PQL A H L K+ K++ QV VV+DP L+ ILR
Sbjct: 114 DNSQESEKMNTTIKDIQKPQLDAPLVHKSLAEILGIRKKVTKEQSQVPVVLDPKLAKILR 173
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITLMWTLL+Q P A KP I K
Sbjct: 174 PHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLMWTLLKQSPEAGKPTIQK 233
Query: 208 AIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+V P+SLVKNW NE+TKWLG + IDG SK E+ +L + GR P++
Sbjct: 234 AIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVI 293
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQND
Sbjct: 294 IVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNTFNALNSLDVSRRVILTGTPIQND 353
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL F N +LG+ EFRK++E PILRG+D+ AS+++R + +E +L+GIVN+
Sbjct: 354 LTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDADASESDRQRGDECTAELLGIVNKF 413
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
LIRRT+ +LSKYLPVK E VV ++ Q LY I S ++ ++G G L
Sbjct: 414 LIRRTNDILSKYLPVKYEHVVFCSISPFQASLYNYFITSPDIQALLRGK-----GSQPLK 468
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL+ +D + P Y G+ + E S K+MVL
Sbjct: 469 AINILKKLCNHPDLL-----NLSDDLPGSECCFPPEYTPKEARGRDRDVRPEYSGKMMVL 523
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYT TLDLFERL + R Y +RLDG+M + KR K+V+ FN
Sbjct: 524 DRMLARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCLRLDGTMNVNKRQKLVDRFND 583
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 584 PNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 643
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT SDTHD KC
Sbjct: 644 IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPNTTSDTHDTFKC 703
Query: 682 SRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWGAG-VSFVFY 733
RC NG Q VK P + D S W+H + + D +L+ G G VS VF+
Sbjct: 704 KRCKPNGKQHVKAP---ATLYGDTSTWNHFVNMCLQSIQDLLLRQEHGLGQVSAVFH 757
>gi|367032442|ref|XP_003665504.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
gi|347012775|gb|AEO60259.1| hypothetical protein MYCTH_2309353 [Myceliophthora thermophila ATCC
42464]
Length = 804
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/714 (50%), Positives = 457/714 (64%), Gaps = 64/714 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTP------ 117
+ K F VP +N GY+ LG+R+ A K LHDP A+VLY P
Sbjct: 99 VFRKAFSVPFVNKEAAGYNPNRPPPTLGLRQGAAFIAKPLHDPCGEFAIVLYDPTIDDKP 158
Query: 118 ---PQL--------------------SAHDLLKIDK----DKIQVHVVVDPVLSNILRPH 150
P+ S ++L I K + +V VV+DP L+ +LRPH
Sbjct: 159 KKAPEAGEERKDAEPPSKLDAPLMHKSLAEILGIKKRVQGEHPRVPVVIDPRLAKVLRPH 218
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAI 209
Q +GVKFMY CVTG+ E A+GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I KAI
Sbjct: 219 QIDGVKFMYRCVTGMIDEKAHGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPTIQKAI 278
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVI 267
+ PSSLV+NW NE+TKWLG + IDG SK E+ +L + + GR P++++
Sbjct: 279 VACPSSLVRNWANELTKWLGADAINPFAIDGKASKEELTRQLRQWAISTGRSITRPVIIV 338
Query: 268 SYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLL 327
SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL
Sbjct: 339 SYETLRLNVEELRNTPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPIQNDLS 398
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
EYF+L++F N +LGT EFRK++E PILRG+D+ AS+AER + +E L +L+GIVN+ +I
Sbjct: 399 EYFALINFANPDLLGTRLEFRKRFELPILRGRDADASEAERQRGDECLAELLGIVNKFII 458
Query: 388 RRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSI 447
RRT+ +LSKYLPVK E VV K+ Q LY I S ++ ++G G L +I
Sbjct: 459 RRTNDILSKYLPVKYEHVVFCKLAPFQLALYNYFITSPGIQALLRGK-----GSQPLKAI 513
Query: 448 TSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDT 504
LKKLCNHPDL + AD P Y G+ + S K+ VLD
Sbjct: 514 GILKKLCNHPDL----LDLAAD-LPGCEQFWPEDYVPKEARGRDRDIRPWYSGKMQVLDR 568
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-T 563
MLA I+ T+DKIVL+SNYTQTLDLFERL + RGY +RLDG+M + KR K+V+ FN
Sbjct: 569 MLARIRADTNDKIVLISNYTQTLDLFERLCRSRGYGCLRLDGAMNVNKRQKLVDKFNDPN 628
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++
Sbjct: 629 GDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 688
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTHD KC R
Sbjct: 689 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFRGDTRSDTHDTFKCKR 748
Query: 684 C-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
C +G Q +K ++ D S W+H + + + D +LK C G VS VF
Sbjct: 749 CRPDGKQHIK---AQAMLYGDTSTWNHFVNEGLKGIEDHLLKQECGGDEVSAVF 799
>gi|406862002|gb|EKD15054.1| SNF2 family domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 864
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/714 (50%), Positives = 461/714 (64%), Gaps = 66/714 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
+ K F VP+ N + Y+ LG+R +GA K LHDP+ A+VLY P
Sbjct: 161 MFRKAFAVPLANKSLPSYNPNRPPPTLGLR-QGAVFIAKPLHDPSGEFAIVLYDPTIDEK 219
Query: 118 ---------------PQL-------SAHDLLKIDK----DKIQVHVVVDPVLSNILRPHQ 151
P++ S ++L I K ++ +V VV+DP LS +LRPHQ
Sbjct: 220 PRTIEEARKAESGEPPKIKEPLVHKSLAEILGIKKVVESERPKVPVVIDPRLSKVLRPHQ 279
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAII 210
EGVKFMY CVTG+ ++A GCIMADEMGLGKTLQCI LMWTLL+Q P A KP I KAII
Sbjct: 280 IEGVKFMYRCVTGMIEDNANGCIMADEMGLGKTLQCIALMWTLLKQSPEAGKPTIQKAII 339
Query: 211 VAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
PSSLVKNW NE+ KWLG + IDG SK E+ +L + GR P++++S
Sbjct: 340 ACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELQQQLRQWAIASGRSVTRPVIIVS 399
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
YET R + L ++GL+LCDEGHRLKN +SQT+ AL GL RRV+LSGTPIQNDL E
Sbjct: 400 YETLRLNVEELKNTKIGLMLCDEGHRLKNGDSQTFTALNGLNVSRRVILSGTPIQNDLTE 459
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
YFSL+ F N G+LGT EFRK+YE PIL+G+D+ SD +R K ++ + +L+GIVN+ +IR
Sbjct: 460 YFSLISFANPGLLGTRMEFRKKYELPILKGRDAAGSDKDRQKGDDTVRELLGIVNKFIIR 519
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
RT+ +LSKYLPVK E VV + Q +LY + I S ++ ++G G L +I
Sbjct: 520 RTNDILSKYLPVKYEHVVFCNLAPFQLDLYNHFISSPDIKALLRGK-----GSQPLKAIG 574
Query: 449 SLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDT 504
LKKLCNHPDL+ + + G D + LP Y G+ + S K+ VLD
Sbjct: 575 LLKKLCNHPDLLNLPEDLPGCDKY------LPDDYVPKESRGRDRDIRPWYSGKMQVLDR 628
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT- 563
MLA I+ T+DKIVL+SNYTQTLD+F++L + RGY +RLDG+M + KR K+V+ FN
Sbjct: 629 MLARIRQDTNDKIVLISNYTQTLDMFDKLCRDRGYGSLRLDGTMNVTKRQKLVDRFNNPE 688
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++
Sbjct: 689 GSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 748
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ+HK++LSSCVVD EDV RHF++ LR LFQ T SDTHD KC R
Sbjct: 749 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFTLDSLRELFQYHGKTTSDTHDTFKCKR 808
Query: 684 C-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
C +G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 809 CKPDGKQYIKAPAM---MYGDTSTWNHFVNEGLKTIQDLLLRQECGDEAVSAVF 859
>gi|425768693|gb|EKV07211.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum
PHI26]
gi|425775851|gb|EKV14096.1| DsDNA-dependent ATPase Rad54, putative [Penicillium digitatum Pd1]
Length = 862
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/681 (51%), Positives = 445/681 (65%), Gaps = 61/681 (8%)
Query: 75 FKVPILNYTGGGYST----KALGVRREGAR---KALHDPTAPNALVLYTPP--------- 118
F+VP++N G YS+ LG+RR GA K LHDP+ A+VLY P
Sbjct: 160 FQVPLINKAVGEYSSGRVAPTLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDDVAEEPA 218
Query: 119 -------------------QLSAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGVK 156
S D+L + KD + +V VV+DP L +LRPHQ EGVK
Sbjct: 219 PKSLEAPTEDTPKSDEPIMHKSLADILGLKKDVEDRPKVPVVIDPRLCKVLRPHQIEGVK 278
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y CVTG+ ++A GCIMAD MGLGKTLQCITLMWTLL+Q A K I K +I PSS
Sbjct: 279 FLYRCVTGLVDKNANGCIMADGMGLGKTLQCITLMWTLLKQSSEAGKTTIQKCVIACPSS 338
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV NW NE+ KWLG IDG +KAE+ ++ + GR V P+L++SYET R
Sbjct: 339 LVGNWANELVKWLGKDATTPFAIDGKATKAELITQIKQWAIASGRGIVRPVLIVSYETLR 398
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+A L+ +GL+LCDEGHRLKN ES T+ AL L RRV+LSGTPIQNDL EYF+L+
Sbjct: 399 MYADTLNDTPIGLLLCDEGHRLKNKESLTWTALNQLNVTRRVILSGTPIQNDLSEYFALL 458
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
HF N +LG+ EFRK++E PILRG+D+ +D E+ +ERL++L GIVN+ +IRRT+ L
Sbjct: 459 HFANPNLLGSQAEFRKRFELPILRGRDAAGTDEEKKLGDERLQELSGIVNKFIIRRTNEL 518
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV M+ Q+ LY + IKS ++ ++G G L +I LKKL
Sbjct: 519 LSKYLPVKYEHVVFCNMSQFQRGLYNHFIKSPEIQSLLRGK-----GSQPLKAIGLLKKL 573
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ A+ + P Y+ G+ + S K+MVLD MLA I+
Sbjct: 574 CNHPDLL-----DLANDLPGCEHTFPEDYSPPDTRGRDREIKSWYSGKMMVLDRMLARIR 628
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIF 569
T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+M IKKR K+V+ FN EF+F
Sbjct: 629 QDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNIKKRTKLVDKFNDPDGQEFVF 688
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEE
Sbjct: 689 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEE 748
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGI 688
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + +T SDTHD KC RC +G
Sbjct: 749 KIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTRSDTHDTFKCKRCRPDGS 808
Query: 689 Q-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 809 QYIKAPAM---MYGDTSSWNH 826
>gi|345564001|gb|EGX46983.1| hypothetical protein AOL_s00097g222 [Arthrobotrys oligospora ATCC
24927]
Length = 1390
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/707 (50%), Positives = 462/707 (65%), Gaps = 67/707 (9%)
Query: 51 SKLPMTKEEMSEHENLIRQILAKPF--KVPILNYTGGGYSTKALGVRREGAR---KALHD 105
+KLP+ K + + E+ R A PF K I N T ALG+RR GA KALHD
Sbjct: 98 NKLPIFK--VKDAESTFRSRFAIPFIDKSRINN----DRPTIALGMRR-GANFVAKALHD 150
Query: 106 PTAPNALVLYTP----------------------------PQLSAHDLLKIDKDKI---- 133
P A+VLY P P S +++L I K +
Sbjct: 151 PAGEFAIVLYDPTIDDKKEEPEEAPSAPEPESSDKSSKGRPNKSLNEILGIKKQDVSEIP 210
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
+V VV+DP L+ +LRPHQ EGVKF+Y TG+ A+GCIMADEMGLGKTLQCITLMWT
Sbjct: 211 RVAVVIDPRLAKVLRPHQIEGVKFLYRATTGLIDSKAHGCIMADEMGLGKTLQCITLMWT 270
Query: 194 LLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLN 250
LL+Q P A +P I K +I PSSLV+NW NE+ KWLG G + +DG +K E+ ++L
Sbjct: 271 LLKQSPEAGRPTIRKCVIACPSSLVRNWANELVKWLGEGTIHPFAVDGKATKEELISQLK 330
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ G + V P+L++SYET R +A L E+GL+LCDEGHRLKN ES T+ AL L
Sbjct: 331 QWAIASGNQVVRPVLIVSYETLRLYAKELGSTEIGLMLCDEGHRLKNGESLTFTALTELN 390
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
KRRV+LSGTPIQNDL EYFSL++F N LG+ +FRK+YE PILRG+D+ + + R K
Sbjct: 391 VKRRVILSGTPIQNDLTEYFSLLNFANPDYLGSRADFRKKYEMPILRGRDANSDEKTREK 450
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
+ERL++L G+VN+ +IRRT+ +LSKYLPVK E VV + Q++LY + + S VR+
Sbjct: 451 GDERLKELFGLVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQRDLYNHFVTSSEVRKL 510
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY---AASYK 487
++G +G L +I LKKLCNHPDL+ D + P+ + AA +
Sbjct: 511 LRG-----VGCKPLKAINVLKKLCNHPDLL-----ELPDDLHGSEQFFPSDFVPKAARGR 560
Query: 488 SGKLL-IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
G+ + + S K++VLD MLA I+ T+DKIVL+SNYTQTLD+FE+L++ +GY ++RLDG
Sbjct: 561 DGRYVNVCYSGKMLVLDRMLARIRQDTNDKIVLISNYTQTLDVFEKLARSKGYGFLRLDG 620
Query: 547 SMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+M + KR K+V+ FN +EFIF+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+A
Sbjct: 621 TMNVNKRQKLVDKFNNPDGDEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALA 680
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD +DV RHF +LR LF
Sbjct: 681 RVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFGSEDLRKLF 740
Query: 666 QLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVT 710
+ NT SDTHD KC RC +G Q VK P + D S W+H
Sbjct: 741 EYNTNTRSDTHDTFKCKRCKPDGRQYVKAPAI---LYGDTSTWNHFA 784
>gi|322707957|gb|EFY99534.1| recombinational repair protein [Metarhizium anisopliae ARSEF 23]
Length = 807
Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/716 (50%), Positives = 454/716 (63%), Gaps = 66/716 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+ K F VP+ + + Y+ LG+R+ + + LHDP+ A+VLY P
Sbjct: 100 VFRKAFSVPLKDKSTASYNPNRPPPTLGLRQGAVVSPRPLHDPSGEFAIVLYDPTVDGKP 159
Query: 118 ------------------PQLSA---HDLL--------KIDKDKIQVHVVVDPVLSNILR 148
PQL A H L K+ K++ QV VV+DP L+ ILR
Sbjct: 160 DNSQESEKLNTTANDIQKPQLDAPLVHKSLAEILGIRKKVTKEQPQVPVVLDPKLAKILR 219
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITLMWTLL+Q P A KP I K
Sbjct: 220 PHQVEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLMWTLLKQSPEAGKPTIQK 279
Query: 208 AIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+V P+SLVKNW NE+TKWLG + IDG SK E+ +L + GR P++
Sbjct: 280 AIVVCPASLVKNWANELTKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVI 339
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQND
Sbjct: 340 IVSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNTFNALNSLDVSRRVILTGTPIQND 399
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL F N +LG+ EFRK++E PILRG+D+ AS+++R + + +L+GIVN+
Sbjct: 400 LTEYFSLTSFANPDLLGSRLEFRKRFEIPILRGRDADASESDRQRGDVCTAELLGIVNKF 459
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
LIRRT+ +LSKYLPVK E VV ++ Q+ LY I S ++ ++G G L
Sbjct: 460 LIRRTNDILSKYLPVKYEHVVFCGVSPFQESLYNYFITSPDIQALLRGK-----GSQPLK 514
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL+ +D + P Y G+ + E S K+MVL
Sbjct: 515 AINILKKLCNHPDLL-----NLSDDLPGSECCFPPEYIPKEARGRDRDVRPEYSGKMMVL 569
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYT TLDLFERL + R Y +RLDG+M + KR K+V+ FN
Sbjct: 570 DRMLARIRQDTNDKIVLISNYTSTLDLFERLCRSREYGCLRLDGTMNVNKRQKLVDRFND 629
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 630 PNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 689
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT SDTHD KC
Sbjct: 690 IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPNTTSDTHDTFKC 749
Query: 682 SRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWGAG-VSFVF 732
RC NG Q VK P + D S W+H + + D +L+ G G VS VF
Sbjct: 750 KRCKPNGKQHVKAP---ATLYGDTSTWNHFVNTCLQSIQDLLLRQEHGLGQVSAVF 802
>gi|303311053|ref|XP_003065538.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240105200|gb|EER23393.1| DNA repair protein rhp54, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 799
Score = 650 bits (1678), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/684 (50%), Positives = 449/684 (65%), Gaps = 62/684 (9%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F +P+++ Y LG+RR GA K LHDP+ A+VLY P
Sbjct: 96 FSIPLIDKNSTSYDPGRPAPLLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDEKPEFKP 154
Query: 118 ------------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGV 155
P+L S ++L I K ++ +V VV+DP L+ +LRPHQ EGV
Sbjct: 155 ETEQKQNEEAAKPKLNEPLVHKSLAEILGIKKNVEERPKVPVVIDPRLAKVLRPHQVEGV 214
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPS 214
KF+Y C TG+ +A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP + K +I P+
Sbjct: 215 KFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPTVQKVVIACPA 274
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
+LV NW NE+ KWLG V IDG SKAE+ ++L + GR+ V P+L++SYET
Sbjct: 275 TLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVRPVLIVSYETL 334
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ESQT+ AL GL RRVLLSGTPIQNDL EY+SL
Sbjct: 335 RLNVGELKETPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSL 394
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
++F N G+LG+ EF K++E PILRG+D+ ++ ER K +E L +L+GIVN+ +IRR++
Sbjct: 395 LNFTNPGVLGSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSND 454
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I LKK
Sbjct: 455 ILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGK-----GSQPLKAIGILKK 509
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL + AD + + P Y G+ + S K+MVLD MLA I
Sbjct: 510 LCNHPDL----LNLSAD-LPGSEQLFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRMLARI 564
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+KKR K+V+ FN EF+
Sbjct: 565 RQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFV 624
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 625 FLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 684
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK+ LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 685 EKIFQRQSHKQLLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCRPDG 744
Query: 688 IQ-VKPPPLESDCTDDLSCWHHVT 710
Q +K P + D S W+H+
Sbjct: 745 TQFIKAPAM---LYGDTSSWNHLV 765
>gi|402080120|gb|EJT75265.1| DNA repair protein rhp54 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 810
Score = 650 bits (1677), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/793 (46%), Positives = 486/793 (61%), Gaps = 74/793 (9%)
Query: 1 RRSLAPSQLSK-RSPEDSPGIKTFPPPVKK--EKRSCTSRKPLGSVDNEDEPNS---KLP 54
RR P L K P PG T P + KR K ++ D+P + +L
Sbjct: 26 RRYPTPQSLDKLHKPFKCPGSATRRPEADRPARKRRKVDYKGADGSEDADKPYTNADRLA 85
Query: 55 MTKEEMSEHENLIRQ----ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALH 104
+ + ++ + + K F +P++N G Y+ LG+R+ A K LH
Sbjct: 86 LANRDANKFPVFQAKDKSTVFRKAFIIPMVNKNSGAYNPNRPPPTLGLRQGAAFVAKPLH 145
Query: 105 DPTAPNALVLYTP-----PQL------------------------SAHDLL----KIDKD 131
DP+ ALVLY P P++ S ++L K++ +
Sbjct: 146 DPSGEFALVLYDPTIDDKPKVREKPAETPAEADTAGEMDAPLVHKSLAEILGIRKKVEGE 205
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM 191
+V VV+DP L+ +LRPHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+
Sbjct: 206 HPRVPVVIDPRLTKVLRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLL 265
Query: 192 WTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNK 248
WTLL+Q P A K I KAI+ PSSLV+NW NE+ KWLG + IDG SK E+ +
Sbjct: 266 WTLLKQSPEAGKSTIQKAIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQ 325
Query: 249 LNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
L + + GR P++++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL
Sbjct: 326 LRQWAISSGRAVTRPVIIVSYETLRLNVEELKHTQIGLMLCDEGHRLKNGDSQTFTALNN 385
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L RRV+LSGTPIQNDL EYFSL+ F N +LGT EFRK++E ILRG+D+ A+++ER
Sbjct: 386 LNVTRRVILSGTPIQNDLSEYFSLISFANPALLGTRLEFRKRFEIAILRGRDADATESER 445
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
K +ERL++L+GIVN+ +IRRT+ +LSKYLPVK E VV + Q +LY I+S ++
Sbjct: 446 AKGDERLKELLGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNLFIRSPEIQ 505
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
++G G L +I LKKLCNHPDL+ ++ N P Y
Sbjct: 506 ALLRGK-----GSQPLKAINILKKLCNHPDLL-----NLSEDLPGCENWFPEDYVPKDSR 555
Query: 489 GK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
G+ + S K+ VLD MLA I+ T+DKIVL+SNYT TLD+FE+L + RGY +RLD
Sbjct: 556 GRDRDIKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTSTLDIFEKLCRSRGYGNLRLD 615
Query: 546 GSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
G+M + KR K+V+ FN EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+
Sbjct: 616 GTMNVTKRQKLVDRFNDPEGTEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQAL 675
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ L+ L
Sbjct: 676 ARVWRDGQKKDCFVYRFITTGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKEL 735
Query: 665 FQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPIL 720
FQ +T SDTHD KC RC +G Q +K P + D S W+H T + + + D +L
Sbjct: 736 FQYRGDTRSDTHDTFKCKRCRPDGKQYIKAPAM---LYGDTSTWNHFTNEGLKPIQDLLL 792
Query: 721 KH-CWGAGVSFVF 732
+ C VS VF
Sbjct: 793 RQECGEPEVSAVF 805
>gi|392862807|gb|EAS36523.2| SNF2 family domain-containing protein [Coccidioides immitis RS]
Length = 797
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/684 (50%), Positives = 448/684 (65%), Gaps = 62/684 (9%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F +P+++ Y LG+RR GA K LHDP+ A+VLY P
Sbjct: 94 FSIPLIDKNSTSYDPGRPAPLLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDEKPEFKP 152
Query: 118 ------------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGV 155
P+L S ++L I K ++ +V VV+DP L+ +LRPHQ EGV
Sbjct: 153 ETEQKQNEEAAKPKLNEPLVHKSLAEILGIKKNVEERPKVPVVIDPRLAKVLRPHQVEGV 212
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPS 214
KF+Y C TG+ +A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP + K +I P+
Sbjct: 213 KFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPTVQKVVIACPA 272
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
+LV NW NE+ KWLG V IDG SKAE+ ++L + GR+ V P+L++SYET
Sbjct: 273 TLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVRPVLIVSYETL 332
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ESQT+ AL GL RRVLLSGTPIQNDL EY+SL
Sbjct: 333 RLNVGELKETPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSL 392
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
++F N G+LG+ EF K++E PILRG+D+ ++ ER K +E L +L+GIVN+ +IRR++
Sbjct: 393 LNFTNPGVLGSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSND 452
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I LKK
Sbjct: 453 ILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGK-----GSQPLKAIGILKK 507
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL + AD + P Y G+ + S K+MVLD MLA I
Sbjct: 508 LCNHPDL----LNLSAD-LPGSEQFFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRMLARI 562
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+KKR K+V+ FN EF+
Sbjct: 563 RQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFV 622
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 623 FLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 682
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK+ LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 683 EKIFQRQSHKQLLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCRRCRPDG 742
Query: 688 IQ-VKPPPLESDCTDDLSCWHHVT 710
Q +K P + D S W+H+
Sbjct: 743 TQFIKAPAM---LYGDTSSWNHLV 763
>gi|452840044|gb|EME41982.1| hypothetical protein DOTSEDRAFT_81015 [Dothistroma septosporum
NZE10]
Length = 815
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/689 (50%), Positives = 436/689 (63%), Gaps = 65/689 (9%)
Query: 75 FKVPILNYTGGGYSTKA----LGVRREGA--RKALHDPTAPNALVLYTP----------- 117
F +P+ N GYS LG+R+ K LHDP+ A+VL+ P
Sbjct: 105 FSIPLKNKDNMGYSQSKGPPLLGLRQGTVFVNKPLHDPSGEFAIVLFDPTVDYRLNAKLL 164
Query: 118 ------------------PQL-------SAHDLL----KIDKDKIQVHVVVDPVLSNILR 148
P+L S D+L K+D ++ +V VV+DP L+ +LR
Sbjct: 165 EDAEADPEKKEEPPAEDKPKLDEPIMHKSLADILGIKKKVDTERPKVPVVIDPKLAKVLR 224
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKF+Y+C TG+ E A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K
Sbjct: 225 PHQVEGVKFLYKCTTGLIEEGAEGCIMADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQK 284
Query: 208 AIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
+I P+SLV+NW NE+ KWLG G + +DG SK E+ ++ + GR + P+L
Sbjct: 285 CVIACPASLVRNWANELVKWLGEGAIIPFAVDGKASKEELTQQMRQWASATGRAVIRPVL 344
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L +GL+LCDEGHRLKN ES TY++L L K+RV+LSGTPIQND
Sbjct: 345 IVSYETLRLYVDELRNTPIGLMLCDEGHRLKNAESNTYESLTALNVKKRVILSGTPIQND 404
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYF+L+ F N G LGT +FRKQYE PILR +D+ SD +R K ERL++L+G VN+
Sbjct: 405 LSEYFALLDFANSGYLGTRLDFRKQYELPILRSRDADGSDKDREKGEERLKELLGKVNKF 464
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY IKS ++ ++G G L
Sbjct: 465 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGK-----GSQPLK 519
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL+ D P Y G+ + S K+ VL
Sbjct: 520 AIGLLKKLCNHPDLL-----NLPDDLPGCEKHFPDDYVPKDLRGRDRDVKPYYSGKMQVL 574
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
MLA I+ T+DKIVL+SNYTQTLD+FE+L + Y +RLDG+M + KR K+VE FN
Sbjct: 575 ARMLARIRQDTNDKIVLISNYTQTLDVFEKLCRNNNYGSLRLDGTMNVNKRQKLVEKFND 634
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 635 PNGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 694
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK+ALSSCVVD EDV RHFS+ LR LFQ + NT SDTHD KC
Sbjct: 695 MTTGTIEEKVFQRQSHKQALSSCVVDSAEDVERHFSVDSLRELFQYKPNTTSDTHDTFKC 754
Query: 682 SRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
RC +G QV P + D S W+H T
Sbjct: 755 KRCKDGRQVMKAP--AMLYGDTSSWNHFT 781
>gi|320039340|gb|EFW21274.1| SNF2 family domain-containing protein [Coccidioides posadasii str.
Silveira]
Length = 797
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/684 (50%), Positives = 448/684 (65%), Gaps = 62/684 (9%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F +P+++ Y LG+RR GA K LHDP A+VLY P
Sbjct: 94 FSIPLIDKNSTSYDPGRPAPLLGMRR-GATFVVKPLHDPCGEFAIVLYDPTVDEKPEFKP 152
Query: 118 ------------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGV 155
P+L S ++L I K ++ +V VV+DP L+ +LRPHQ EGV
Sbjct: 153 ETEQKQNEEAAKPKLNEPLVHKSLAEILGIKKNVEERPKVPVVIDPRLAKVLRPHQVEGV 212
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPS 214
KF+Y C TG+ +A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP + K +I P+
Sbjct: 213 KFLYRCTTGLIDPNANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPTVQKVVIACPA 272
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
+LV NW NE+ KWLG V IDG SKAE+ ++L + GR+ V P+L++SYET
Sbjct: 273 TLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVRPVLIVSYETL 332
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ESQT+ AL GL RRVLLSGTPIQNDL EY+SL
Sbjct: 333 RLNVGELKETPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSL 392
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
++F N G+LG+ EF K++E PILRG+D+ ++ ER K +E L +L+GIVN+ +IRR++
Sbjct: 393 LNFTNPGVLGSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSND 452
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I LKK
Sbjct: 453 ILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGK-----GSQPLKAIGILKK 507
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL + AD + + P Y G+ + S K+MVLD MLA I
Sbjct: 508 LCNHPDL----LNLSAD-LPGSEQLFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRMLARI 562
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+KKR K+V+ FN EF+
Sbjct: 563 RQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFV 622
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 623 FLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 682
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK+ LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 683 EKIFQRQSHKQLLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCRPDG 742
Query: 688 IQ-VKPPPLESDCTDDLSCWHHVT 710
Q +K P + D S W+H+
Sbjct: 743 TQFIKAPAM---LYGDTSSWNHLV 763
>gi|453084606|gb|EMF12650.1| DNA repair and recombination protein RAD54 [Mycosphaerella
populorum SO2202]
Length = 714
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/687 (50%), Positives = 440/687 (64%), Gaps = 63/687 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTP-----PQLSAH 123
F VP+ N G ++ LG+R+ K LHDP+ A+VL+ P PQ
Sbjct: 6 FAVPMKNKDTGAWNPSRPPPLLGLRQGTVFVAKPLHDPSGEFAIVLFDPTVDGKPQPLVS 65
Query: 124 D-----------------------------LLKIDK----DKIQVHVVVDPVLSNILRPH 150
D +L I K ++ +V VV+DP L+ +LRPH
Sbjct: 66 DESDGANKDGEAPSSTPVMDEPIMHKSLAEILGIKKVVVDERPKVPVVIDPRLAKVLRPH 125
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAI 209
Q EGVKF+Y C TG+ +A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K I
Sbjct: 126 QVEGVKFLYRCTTGLIDANAEGCIMADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCI 185
Query: 210 IVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVI 267
I P+SLV+NW NE+ KWLG G + +DG SK ++ ++ ++ GR V P+L+I
Sbjct: 186 IACPASLVRNWANELVKWLGEGAIEPFAVDGKASKEQMTQQMRAWASASGRAVVRPVLII 245
Query: 268 SYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLL 327
SYET R + L +GL+LCDEGHRLKN ESQTY AL GL K+RV+LSGTPIQNDL
Sbjct: 246 SYETLRLYVDELRNTPIGLMLCDEGHRLKNSESQTYMALAGLNVKKRVILSGTPIQNDLS 305
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
EYFSL++F N G LGT +FRKQ+E PILRG+D+ ++A+R K +ERL++L+ +VN+ +I
Sbjct: 306 EYFSLLNFANPGYLGTQADFRKQFENPILRGRDADGTEADRQKGDERLKELLTLVNKFII 365
Query: 388 RRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSI 447
RRT+ +LSKYLPVK E VV + Q +LY IKS ++ ++G G L +I
Sbjct: 366 RRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGK-----GSQPLKAI 420
Query: 448 TSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDT 504
LKKLCNHPDL+ D + P Y + G+ + S K+ VLD
Sbjct: 421 GLLKKLCNHPDLL-----NLPDDLPGSEEHFPEEYVPKDQRGRDREVNPVYSGKMQVLDR 475
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
MLA I+M ++DKIVL+SNYTQTLD+FE+L + R Y +RLDG+M + KR K+V+ FN +
Sbjct: 476 MLARIRMDSNDKIVLISNYTQTLDVFEKLCRSRSYGCLRLDGTMNVNKRQKLVDKFNDPN 535
Query: 565 N-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
EF+F+LSSKAGGCGLNLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF++
Sbjct: 536 GAEFVFLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFMA 595
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ+HK+ALSSCVVD EDV RHFS LR LFQ T SDTHD KC R
Sbjct: 596 AGTIEEKIFQRQSHKQALSSCVVDSAEDVERHFSTESLRELFQYRPGTTSDTHDTFKCKR 655
Query: 684 CVNGIQVKPPPLESDCTDDLSCWHHVT 710
C NG QV P + D S W+H T
Sbjct: 656 CKNGKQVLKAP--AMLYGDTSTWNHFT 680
>gi|396499206|ref|XP_003845417.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
gi|312221998|emb|CBY01938.1| hypothetical protein LEMA_P007250.1 [Leptosphaeria maculans JN3]
Length = 1469
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/681 (50%), Positives = 438/681 (64%), Gaps = 59/681 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVR--REGARKALHDPTAPNALVLYTP----------- 117
F VP++N G Y+ LG+R + LHDP+ A+VLY P
Sbjct: 106 FTVPLINKDTGAYNPHRPAPLLGMRIGTVFVARPLHDPSGEFAIVLYDPTVDDKPIPKEE 165
Query: 118 --PQLS-----------AHDLL--------KIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
P+LS H L K++ ++ +V VV+DP L+ +LRPHQ EGVK
Sbjct: 166 AEPKLSQTEKKELEAPLVHKSLAEILGLKKKVENERPRVPVVIDPRLAKVLRPHQVEGVK 225
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y TG+ A GCIMADEMGLGKTLQCI LMWTLL+Q P A KP I K +I PSS
Sbjct: 226 FLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMWTLLKQSPDAGKPTIQKCVIACPSS 285
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV+NW NE+ KWLG + IDG SK E+ ++ + GR V P+L++SYET R
Sbjct: 286 LVRNWANELVKWLGKDAITPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLR 345
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ + +GL+LCDEGHRLKN ES T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 346 LYVDEFGQTPIGLLLCDEGHRLKNGESLTFTALNSLNVQRRVILSGTPIQNDLSEYFALL 405
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N LGT EFRKQYE PILRG+D+ +D + K NERL +L+G+VN+ +IRRT+ +
Sbjct: 406 NFANPNYLGTRMEFRKQYEIPILRGRDANGTDEDVKKGNERLTELLGLVNKFIIRRTNDI 465
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV + QK+LY + IKS V+ ++G G L I LKKL
Sbjct: 466 LSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGK-----GSQPLKVIGMLKKL 520
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + G E ++LP + G+ + + S K+ VLD MLA I+
Sbjct: 521 CNHPDLL--NLPEDLPGCE---DVLPDDFVQKDARGRDREVKVWYSGKMAVLDRMLARIR 575
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIF 569
T+DKIVL+SNYTQTLDLF L + RGY +RLDG+M + KR K+V+ FN EF+F
Sbjct: 576 AETNDKIVLISNYTQTLDLFAALCRSRGYGALRLDGTMNVSKRQKLVDKFNDPEGPEFVF 635
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEE
Sbjct: 636 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEE 695
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV--NG 687
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +NT SDTHD KC RC +G
Sbjct: 696 KVFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRDNTTSDTHDTFKCKRCRKEDG 755
Query: 688 IQVKPPPLESDCTDDLSCWHH 708
Q+ P + D S W+H
Sbjct: 756 KQIIKAP--AMLYGDTSSWNH 774
>gi|440478876|gb|ELQ59674.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae
P131]
Length = 843
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/716 (50%), Positives = 455/716 (63%), Gaps = 67/716 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
I K F VP++N Y+ LG+R +GA KALHDP+ A+VLY P
Sbjct: 137 IFRKSFVVPLVNKNVASYNPNRPPPTLGLR-QGAVFVAKALHDPSGEFAIVLYDPTVDDR 195
Query: 118 -------------PQLSAHDL----------------LKIDKDKIQVHVVVDPVLSNILR 148
P S L K++ + +V VV+DP L+ +LR
Sbjct: 196 PKEPEKPVEEPDKPSPSQEKLDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLR 255
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I K
Sbjct: 256 PHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPAIQK 315
Query: 208 AIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+ PSSLV+NW NE+ KWLG + IDG SK E+ +L + + GR P++
Sbjct: 316 AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVI 375
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQND
Sbjct: 376 IVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNLNVSRRVILSGTPIQND 435
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL+ F N +LGT EFRK++E PILRG+D+ AS+ ER K +E L++L+ +VN+
Sbjct: 436 LSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERVKGDECLKELLALVNKF 495
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L
Sbjct: 496 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLK 550
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL+ +D + P+ Y G+ + S K+ VL
Sbjct: 551 AIGILKKLCNHPDLL-----NLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVL 605
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYT TLDLFERL + RGY +RLDG+M + KR K+V+ FN
Sbjct: 606 DRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFND 665
Query: 563 T-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 666 PEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 725
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ L+ LFQ NT SDTHD KC
Sbjct: 726 IATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQYRGNTRSDTHDTFKC 785
Query: 682 SRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
RC +G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 786 KRCKPDGKQYIKAPAM---LYGDTSTWNHFNNEGLKPIQDLLLRQECGETEVSAVF 838
>gi|343429051|emb|CBQ72625.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 871
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/714 (49%), Positives = 458/714 (64%), Gaps = 66/714 (9%)
Query: 71 LAKPFKVPILNYTGGG-----YSTKALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+ K F VP++ G S ALG RR+ + LHDP +A+VL+ P
Sbjct: 167 IKKGFSVPVMTNKQGQVVETRLSYAALGTRRQIDIPPRPLHDPMGEHAIVLFDPTVDDRE 226
Query: 118 ---------------------------PQLSAHDLLKIDKDKIQ----VHVVVDPVLSNI 146
P S D+L ++K+K + + VV+DP L +
Sbjct: 227 AELRKAEIQQEQAAEEARIEDGAAPQTPHKSLADILGLNKNKTKEIEKLPVVIDPRLGKV 286
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLI 205
LRPHQ EGVKF+Y C TG+ +E+A+GCIMADEMGLGKTLQCITLMWTLL+Q P+ K I
Sbjct: 287 LRPHQVEGVKFLYRCTTGLVVENAFGCIMADEMGLGKTLQCITLMWTLLKQSPIPKKTTI 346
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAA-LPIDGG-SKAEIDNKLNSFMQTYGRRPVNP 263
DK IIV PSSLV+NW NE+ KWLG L +DG SK E+ + GR P
Sbjct: 347 DKCIIVCPSSLVRNWANELVKWLGAAAPGNLALDGKLSKDEMIEATRRWCNASGRAITQP 406
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
++++SYET R+ L EVGL+LCDEGHRLKN +S T+QAL +K +RRV+LSGTPIQ
Sbjct: 407 VMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTPIQ 466
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
NDL EYF+L++F N +LG+ EFRK +E IL+G+D+ A+D ++ +ANE+L QL +V+
Sbjct: 467 NDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATDKQQQEANEKLSQLSALVS 526
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
R +IRRT+ LLSKYLPVK E VV KM+ Q +LY I+S +++ ++G G
Sbjct: 527 RFIIRRTNDLLSKYLPVKYEHVVFCKMSPFQLDLYRLFIRSPEIKKLLRG-----TGSQP 581
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
L +I LKKLCNHPDL + +D E + P GY + ++ ELS K+MVL
Sbjct: 582 LKAIGILKKLCNHPDL----LDLPSD-LEGSEEYFPEGYTPRDRR-QVNPELSGKMMVLQ 635
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK- 562
L I+ TT+DKIVL+SNYTQTLD+FER+ + + RLDG+MTI KR K+V+ FN
Sbjct: 636 RFLETIRATTNDKIVLISNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFNDP 695
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
EFIF+LSSKAGGCGLNLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF+
Sbjct: 696 EGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFI 755
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+TGSIEEK++QRQ+HK++LSSCVVD +D ARHFS +LR+LF +E T DTHD KC
Sbjct: 756 ATGSIEEKILQRQSHKQSLSSCVVDEAQDAARHFSGEDLRALFTFKEQTACDTHDTYKCK 815
Query: 683 RCVNGIQ-VKPPPLESDCTDDLSCWHHV--TEKRWLVDPILKHCWGA-GVSFVF 732
RC +G Q +K L D S W+H E L D +L+ VSFVF
Sbjct: 816 RCKSGKQFIKAQAL---LYGDTSTWNHYGKDEVHHLHDDLLRAEQAYDDVSFVF 866
>gi|389637459|ref|XP_003716366.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
gi|22775414|dbj|BAC11858.1| recombinational repair protein [Magnaporthe grisea]
gi|351642185|gb|EHA50047.1| DNA repair protein rhp54 [Magnaporthe oryzae 70-15]
Length = 803
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/716 (50%), Positives = 455/716 (63%), Gaps = 67/716 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
I K F VP++N Y+ LG+R +GA KALHDP+ A+VLY P
Sbjct: 97 IFRKSFVVPLVNKNVASYNPNRPPPTLGLR-QGAVFVAKALHDPSGEFAIVLYDPTVDDR 155
Query: 118 -------------PQLSAHDL----------------LKIDKDKIQVHVVVDPVLSNILR 148
P S L K++ + +V VV+DP L+ +LR
Sbjct: 156 PKEPEKPVEEPDKPSPSQEKLDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLR 215
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I K
Sbjct: 216 PHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPAIQK 275
Query: 208 AIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+ PSSLV+NW NE+ KWLG + IDG SK E+ +L + + GR P++
Sbjct: 276 AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVI 335
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQND
Sbjct: 336 IVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNLNVSRRVILSGTPIQND 395
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL+ F N +LGT EFRK++E PILRG+D+ AS+ ER K +E L++L+ +VN+
Sbjct: 396 LSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERVKGDECLKELLALVNKF 455
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L
Sbjct: 456 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLK 510
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL+ +D + P+ Y G+ + S K+ VL
Sbjct: 511 AIGILKKLCNHPDLL-----NLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVL 565
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYT TLDLFERL + RGY +RLDG+M + KR K+V+ FN
Sbjct: 566 DRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFND 625
Query: 563 T-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 626 PEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 685
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ L+ LFQ NT SDTHD KC
Sbjct: 686 IATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQYRGNTRSDTHDTFKC 745
Query: 682 SRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
RC +G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 746 KRCKPDGKQYIKAPAM---LYGDTSTWNHFNNEGLKPIQDLLLRQECGETEVSAVF 798
>gi|443894835|dbj|GAC72182.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 865
Score = 648 bits (1671), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/715 (49%), Positives = 461/715 (64%), Gaps = 68/715 (9%)
Query: 71 LAKPFKVPILNYTGGG-----YSTKALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+ K F VP++ G S ALG RR+ + LHDP +A+VL+ P
Sbjct: 161 IKKGFSVPLMTNKQGQVVETVLSHAALGTRRQIDIPPRPLHDPMGEHAIVLFDPTVDDRE 220
Query: 118 ---------------------------PQLSAHDLLKIDKDKIQ----VHVVVDPVLSNI 146
P S D+L ++K K + + VV+DP+LS +
Sbjct: 221 AERRKAELQQEQAAEEERIEAGAPIPTPHKSLADILGLNKAKSKEVEKIPVVIDPILSKV 280
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLI 205
LRPHQ EGVKF+Y C TG+ +E+AYGCIMADEMGLGKTLQCI LMWTLL+Q P+AK I
Sbjct: 281 LRPHQVEGVKFLYRCTTGLVVENAYGCIMADEMGLGKTLQCIALMWTLLKQSPIAKKSTI 340
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRV-AALPIDGG-SKAEIDNKLNSFMQTYGRRPVNP 263
DK IIV PSSLV+NW NE+TKWLG + L +DG SK E+ + GR P
Sbjct: 341 DKCIIVCPSSLVRNWANELTKWLGAKAPGTLALDGKLSKDEMIEATRRWCNASGRAITQP 400
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
++++SYET R+ L EVGL+LCDEGHRLKN +S T+QAL +K +RRV+LSGTPIQ
Sbjct: 401 VMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTPIQ 460
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
NDL EYF+L++F N +LG+ EFRK +E IL+G+D+ A++ ++ +ANE+L QL +V+
Sbjct: 461 NDLSEYFALLNFANPELLGSRVEFRKNFEIAILKGRDAEATEKQQQEANEKLSQLSALVS 520
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
R +IRRT+ LLSKYLPVK E VV KM Q +LY I+S +++ ++G G
Sbjct: 521 RFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLFIRSPEIKKLLRG-----TGSQP 575
Query: 444 LSSITSLKKLCNHPDLVMDKIQT-GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVL 502
L +I LKKLCNHPDL+ G++ + P GY + + ELS K+MVL
Sbjct: 576 LKAIGILKKLCNHPDLLDLPNDLDGSEQY------FPEGYTPRDRR-YVNPELSGKMMVL 628
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
L I+ TT+DKIVL+SNYTQTLD+FER+ + + RLDG+MTI KR K+V+ FN
Sbjct: 629 QRFLETIRATTNDKIVLISNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFND 688
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
EFIF+LSSKAGGCGLNLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF
Sbjct: 689 PEGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRF 748
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TGSIEEK++QRQ+HK++LSSCVVD +D ARHFS +LR+LF +E T+ DTHD KC
Sbjct: 749 IATGSIEEKILQRQSHKQSLSSCVVDEAQDAARHFSGEDLRALFAFKEQTVCDTHDTYKC 808
Query: 682 SRCVNGIQ-VKPPPLESDCTDDLSCWHHV--TEKRWLVDPILKHCWGAG-VSFVF 732
RC +G Q +K P L D S W+H E L D +L+ VSFVF
Sbjct: 809 KRCKSGKQSIKAPAL---LYGDTSTWNHYGKAEMHHLHDDLLRAEQAYDEVSFVF 860
>gi|440467195|gb|ELQ36432.1| DNA repair and recombination protein RAD54 [Magnaporthe oryzae Y34]
Length = 869
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/716 (50%), Positives = 455/716 (63%), Gaps = 67/716 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
I K F VP++N Y+ LG+R +GA KALHDP+ A+VLY P
Sbjct: 163 IFRKSFVVPLVNKNVASYNPNRPPPTLGLR-QGAVFVAKALHDPSGEFAIVLYDPTVDDR 221
Query: 118 -------------PQLSAHDL----------------LKIDKDKIQVHVVVDPVLSNILR 148
P S L K++ + +V VV+DP L+ +LR
Sbjct: 222 PKEPEKPVEEPDKPSPSQEKLDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLR 281
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I K
Sbjct: 282 PHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPAIQK 341
Query: 208 AIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+ PSSLV+NW NE+ KWLG + IDG SK E+ +L + + GR P++
Sbjct: 342 AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAISSGRAVTRPVI 401
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQND
Sbjct: 402 IVSYETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFTALNNLNVSRRVILSGTPIQND 461
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL+ F N +LGT EFRK++E PILRG+D+ AS+ ER K +E L++L+ +VN+
Sbjct: 462 LSEYFSLISFANPDLLGTRLEFRKRFELPILRGRDADASEKERVKGDECLKELLALVNKF 521
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L
Sbjct: 522 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLK 576
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL+ +D + P+ Y G+ + S K+ VL
Sbjct: 577 AIGILKKLCNHPDLL-----NLSDDLPGSEAHWPSDYVPKESRGRDREIKPWYSGKMQVL 631
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYT TLDLFERL + RGY +RLDG+M + KR K+V+ FN
Sbjct: 632 DRMLARIRADTNDKIVLISNYTSTLDLFERLCRNRGYGSLRLDGTMNVTKRQKLVDKFND 691
Query: 563 T-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 692 PEGSEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 751
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ L+ LFQ NT SDTHD KC
Sbjct: 752 IATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLKELFQYRGNTRSDTHDTFKC 811
Query: 682 SRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
RC +G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 812 KRCKPDGKQYIKAPAM---LYGDTSTWNHFNNEGLKPIQDLLLRQECGETEVSAVF 864
>gi|71008587|ref|XP_758230.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
gi|46097848|gb|EAK83081.1| hypothetical protein UM02083.1 [Ustilago maydis 521]
Length = 870
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/714 (49%), Positives = 455/714 (63%), Gaps = 66/714 (9%)
Query: 71 LAKPFKVPILNYTGGG-----YSTKALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+ K F VP++ G S ALG RR+ + LHDP +A+VL+ P
Sbjct: 166 IKKGFSVPVMTNKQGQVIETRLSYAALGTRRQIDIPPRPLHDPMGEHAIVLFDPTIDDRE 225
Query: 118 ---------------------------PQLSAHDLLKIDKDKIQ----VHVVVDPVLSNI 146
P S D+L ++K K + V VV+DPVLS +
Sbjct: 226 AERRKAEIQQEQAAEETRIEAGAAVQTPHKSLADILGLNKAKSKEIEKVPVVIDPVLSKV 285
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLI 205
LRPHQ EGVKF+Y C TG+ +E AYGCIMADEMGLGKTLQCI LMWTLL+Q P+A K I
Sbjct: 286 LRPHQVEGVKFLYRCTTGLVVEKAYGCIMADEMGLGKTLQCIALMWTLLKQSPIAHKSTI 345
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAA-LPIDGG-SKAEIDNKLNSFMQTYGRRPVNP 263
+K IIV PSSLV+NW NE+ KWLG L +DG SK E+ + GR P
Sbjct: 346 EKCIIVCPSSLVRNWANELIKWLGPAAPGNLALDGKLSKDEMIEATRRWCSASGRAISQP 405
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
++++SYET R+ L EVGL+LCDEGHRLKN +S T+QAL +K +RRV+LSGTPIQ
Sbjct: 406 VMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTPIQ 465
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
NDL EYF+L++F N +LG+ EFRK +E IL+G+D+ A++ ++ +ANE+L QL +V+
Sbjct: 466 NDLSEYFALLNFANPELLGSRTEFRKNFEIAILKGRDAEATEKQQQEANEKLSQLSALVS 525
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
R +IRRT+ LLSKYLPVK E VV KM+ Q +LY I+S +++ ++G G
Sbjct: 526 RFIIRRTNDLLSKYLPVKYEHVVFCKMSAFQLDLYRLFIRSPEIKKLLRG-----TGSQP 580
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
L +I LKKLCNHPDL+ + E + P Y + + ELS K+MVL
Sbjct: 581 LKAIGILKKLCNHPDLL-----DLPNDLEGSEEYFPEAYTPRDRR-YVNPELSGKMMVLQ 634
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK- 562
L I+ T++DKIVL+SNYTQTLD+FER+ + + RLDG+MTI KR K+V+ FN
Sbjct: 635 RFLETIRATSNDKIVLISNYTQTLDVFERMCRANRWGMFRLDGTMTINKRQKLVDRFNDP 694
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
EFIF+LSSKAGGCGLNLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF+
Sbjct: 695 EGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFI 754
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+TGSIEEK++QRQ+HK++LSSCVVD +D ARHFS +LR+LF +E T DTHD KC
Sbjct: 755 ATGSIEEKILQRQSHKQSLSSCVVDEAQDAARHFSGEDLRALFTFKEETACDTHDTYKCK 814
Query: 683 RCVNGIQ-VKPPPLESDCTDDLSCWHHV--TEKRWLVDPILKHCWGA-GVSFVF 732
RC NG Q +K L D S W+H E L D +L+ VSFVF
Sbjct: 815 RCKNGKQFIKAGAL---LYGDTSTWNHYGKNEMHHLHDDLLRAEQAYDDVSFVF 865
>gi|452981665|gb|EME81425.1| hypothetical protein MYCFIDRAFT_155601 [Pseudocercospora fijiensis
CIRAD86]
Length = 810
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/686 (50%), Positives = 439/686 (63%), Gaps = 65/686 (9%)
Query: 75 FKVPILNYTGGGYSTKA----LGVRREGA--RKALHDPTAPNALVLYTP----------- 117
F VP+ N Y+ LG+R+ K LHDP A+VL+ P
Sbjct: 102 FLVPLKNKDTTQYNANRPPPLLGLRQGQVFVAKPLHDPAGEFAIVLFDPTVDGKPQPKVL 161
Query: 118 ----------------PQL-------SAHDLL----KIDKDKIQVHVVVDPVLSNILRPH 150
P++ S D+L K+D ++ +V VV+DP L+ LRPH
Sbjct: 162 ENGEIVPSQEEPKEHAPRMEEPLMHKSLADILGIKKKVDTERPKVPVVIDPRLAQKLRPH 221
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAI 209
Q EGVKF+Y+C TG+ +A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K I
Sbjct: 222 QVEGVKFLYKCTTGLIDSNAEGCIMADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCI 281
Query: 210 IVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVI 267
+ PSSLV+NW NE+ KWLG + DG SK E+ ++ S+ GR V P+L++
Sbjct: 282 VACPSSLVRNWANELVKWLGPDAITPFACDGKASKEELTQQMRSWASATGRAVVRPVLIV 341
Query: 268 SYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLL 327
SYET R + L +GL+LCDEGHRLKN ESQT++AL GL K+RV+LSGTPIQNDL
Sbjct: 342 SYETLRLYVDELRNAPIGLMLCDEGHRLKNAESQTFEALTGLNVKKRVILSGTPIQNDLS 401
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
EYF+L+ F N G LGT QEFRKQYE PILRG+D+ +DA+R K +ERL++L+ +VN+ +I
Sbjct: 402 EYFALLDFANPGYLGTRQEFRKQYEIPILRGRDADGTDADRQKGDERLKELLILVNKFII 461
Query: 388 RRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSI 447
RRT+ +LSKYLPVK E VV + Q +LY IKS ++ ++G G L +I
Sbjct: 462 RRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGK-----GSQPLKAI 516
Query: 448 TSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDT 504
LKKLCNHPDL+ D P + G+ + S K+ VLD
Sbjct: 517 GLLKKLCNHPDLL-----NLPDDLPGCEEHFPADFVPKDARGRDRDVKPWYSGKMQVLDR 571
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT- 563
MLA I+ T+DKIVL+SNYTQTLD+FE+L + R Y +RLDG+M + KR K+V+ FN
Sbjct: 572 MLARIRQDTNDKIVLISNYTQTLDVFEKLCRNRSYGCLRLDGTMNVNKRQKLVDKFNDPE 631
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++
Sbjct: 632 GDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIA 691
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ T SDTHD KC R
Sbjct: 692 TGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPGTTSDTHDTFKCKR 751
Query: 684 CVNGIQ-VKPPPLESDCTDDLSCWHH 708
C +G Q +K P + D S W+H
Sbjct: 752 CKDGRQYIKAPAM---MYGDTSSWNH 774
>gi|327349292|gb|EGE78149.1| DsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis ATCC 18188]
Length = 849
Score = 646 bits (1667), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/693 (50%), Positives = 444/693 (64%), Gaps = 66/693 (9%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
QI + F +P++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 134 QIFKQRFSIPLMNKNSGAYNPNRPAPILGMRSGTTFVVKPLHDPSGEFAIVLYDPTIDDK 193
Query: 118 -----------------------PQLSA-------HDLLKIDKD---KIQVHVVVDPVLS 144
P+L A D+L I K + +V VV+DP L+
Sbjct: 194 PVDPNDANDGNEERKEGEKKNDPPKLDAPLVHKSLADILGIKKKVDARPRVPVVIDPRLA 253
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KP 203
+LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A K
Sbjct: 254 KVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKT 313
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPV 261
I K +I PS+LVKNW NE+ KWLG G V+ IDG SKAE+ ++L + + GR V
Sbjct: 314 TIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLRQWAVSSGRAVV 373
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
P+L++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTP
Sbjct: 374 RPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTP 433
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL EYFSL++F N ILGT EF K+YE PILRG+D+ A+D +R K +E + +L+ +
Sbjct: 434 IQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADATDEDRKKGDESVTELLNV 493
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
VN+ +IRRT+ +LSKYLPVK E VV + Q +LY + I+S ++ ++G G
Sbjct: 494 VNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQSPDIKSLLRGK-----GS 548
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAK 498
L +I LKKLCNHPDL + G D + P Y G+ + S K
Sbjct: 549 QPLKAIGLLKKLCNHPDL----LNLGTD-LPGSEQFFPDDYVPMECRGRDRDVRSWYSGK 603
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+
Sbjct: 604 MMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVD 663
Query: 559 TFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CF
Sbjct: 664 KFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCF 723
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHD 677
VYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD
Sbjct: 724 VYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTRSDTHD 783
Query: 678 KIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
KC RC +G Q +K P + D S W+H
Sbjct: 784 TFKCKRCRPDGTQHIKAPAM---MYGDTSSWNH 813
>gi|156039515|ref|XP_001586865.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980]
gi|154697631|gb|EDN97369.1| hypothetical protein SS1G_11894 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 861
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/725 (49%), Positives = 455/725 (62%), Gaps = 75/725 (10%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
+ K F VP++N GGY+ K LG+R +GA KALHDP+ A+VLY P
Sbjct: 145 MFRKRFSVPLINKDAGGYNPKRPPPTLGLR-QGAVFIAKALHDPSGEFAIVLYDPTIDEK 203
Query: 118 --------------------------PQLS-----AH----DLLKIDK----DKIQVHVV 138
P L AH ++L I K ++ +V VV
Sbjct: 204 PRSIEQAKKEEDAKKETEEKDGELDKPVLKLDAPLAHKSLAEILGIKKVVEGERPKVPVV 263
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
+DP L+ +LRPHQ EGVKFMY CVTG+ + A GCIMADEMGLGKTLQCITLMWTLL+Q
Sbjct: 264 IDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLMWTLLKQS 323
Query: 199 PLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQT 255
A KP I+KAII PSSLVKNW NE+ KWLG + IDG SK E+ +L +
Sbjct: 324 TDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAIA 383
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
GR P++++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV
Sbjct: 384 SGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNSLNVTRRV 443
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSGTPIQNDL EYFSLV F N G+LGT EFRK+YE PI RG+D+ SD +R K +E +
Sbjct: 444 ILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDRQKGDECI 503
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
+ L+ +VN+ +IRRT+ +LSKYLPVK E VV + Q +LY + I S ++ ++G
Sbjct: 504 KDLLNVVNKFIIRRTNDILSKYLPVKYEHVVFCSLAPFQLDLYNHFITSPDIKALLRGK- 562
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LL 492
G L +I LKKLCNHPDL+ +D P Y G+ +
Sbjct: 563 ----GSQPLKAIGMLKKLCNHPDLL-----NLSDDLPGCEKYWPEDYVPKDGRGRDRDIK 613
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
S K+ VLD MLA I+ T+DKIVL+SNYTQTLD+F++L + RGY +RLDG+M + K
Sbjct: 614 PWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRNRGYGSLRLDGTMNVTK 673
Query: 553 RAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDG
Sbjct: 674 RQKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDG 733
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
QKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ ++T
Sbjct: 734 QKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRKDT 793
Query: 672 ISDTHDKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKH-CWGAG 727
SDTHD KC RC +G Q ++ D S W+H + D +L+ C
Sbjct: 794 TSDTHDTFKCKRCKPDGKQFL--KAQAMMYGDTSTWNHFVNSGLGTIQDLLLRQECGDEN 851
Query: 728 VSFVF 732
VS VF
Sbjct: 852 VSAVF 856
>gi|239608107|gb|EEQ85094.1| DNA repair and recombination protein RAD54 [Ajellomyces
dermatitidis ER-3]
Length = 795
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/693 (50%), Positives = 444/693 (64%), Gaps = 66/693 (9%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
QI + F +P++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 80 QIFKQRFSIPLMNKNSGAYNPNRPAPILGMRSGTTFVVKPLHDPSGEFAIVLYDPTIDDK 139
Query: 118 -----------------------PQLSA-------HDLLKIDKD---KIQVHVVVDPVLS 144
P+L A D+L I K + +V VV+DP L+
Sbjct: 140 PVDPNDANDGNEERKEGEKKNDPPKLDAPLVHKSLADILGIKKKVDARPRVPVVIDPRLA 199
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KP 203
+LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A K
Sbjct: 200 KVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKT 259
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPV 261
I K +I PS+LVKNW NE+ KWLG G V+ IDG SKAE+ ++L + + GR V
Sbjct: 260 TIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLRQWAVSSGRAVV 319
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
P+L++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTP
Sbjct: 320 RPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTP 379
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL EYFSL++F N ILGT EF K+YE PILRG+D+ A+D +R K +E + +L+ +
Sbjct: 380 IQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADATDEDRKKGDESVTELLNV 439
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
VN+ +IRRT+ +LSKYLPVK E VV + Q +LY + I+S ++ ++G G
Sbjct: 440 VNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQSPDIKSLLRGK-----GS 494
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAK 498
L +I LKKLCNHPDL + G D + P Y G+ + S K
Sbjct: 495 QPLKAIGLLKKLCNHPDL----LNLGTD-LPGSEQFFPDDYVPMECRGRDRDVRSWYSGK 549
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+
Sbjct: 550 MMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVD 609
Query: 559 TFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CF
Sbjct: 610 KFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCF 669
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHD 677
VYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD
Sbjct: 670 VYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTRSDTHD 729
Query: 678 KIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
KC RC +G Q +K P + D S W+H
Sbjct: 730 TFKCKRCRPDGTQHIKAPAM---MYGDTSSWNH 759
>gi|310795007|gb|EFQ30468.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 852
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/713 (49%), Positives = 451/713 (63%), Gaps = 63/713 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTP-----P 118
+ K F +P++N Y+ LG+R K LHDP+ ++VLY P P
Sbjct: 148 VFRKAFSIPLINKNSAAYNPNRPPPTLGLRTGATFIAKPLHDPSGEFSIVLYDPTVDDKP 207
Query: 119 QL-----------------------SAHDLL----KIDKDKIQVHVVVDPVLSNILRPHQ 151
++ S ++L K++ D +V VV+DP L+ +LRPHQ
Sbjct: 208 KVPEKKQDNKDAEAEAKIDAPLVHKSLAEILGIKKKVEGDHPRVPVVIDPRLAKVLRPHQ 267
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAII 210
EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+
Sbjct: 268 VEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKSTIQKAIV 327
Query: 211 VAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
PSSLV+NW NE+ KWLG + IDG SK E+ +L + GR P++++S
Sbjct: 328 ACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVS 387
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
YET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL E
Sbjct: 388 YETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFNALNSLNVTRRVILSGTPIQNDLSE 447
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
YF+L+ F N +LGT EFRK++E PILRG+D+ AS+ +R K +E L +L+GIVN+ +IR
Sbjct: 448 YFALISFANPDLLGTRLEFRKRFELPILRGRDADASEIDRKKGDECLSELLGIVNKFIIR 507
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
RT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L +I
Sbjct: 508 RTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPEIQALLRGK-----GSQPLKAIN 562
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTM 505
LKKLCNHPDL+ AD + N P Y G+ + S K+ VLD M
Sbjct: 563 ILKKLCNHPDLL-----NIADDLPGSENCYPDDYVPKEARGRDRDIKPWYSGKMQVLDRM 617
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
LA I+ T+DKIVL+SNYTQTLDLFE+L + R Y +RLDG+M + KR K+V+ FN
Sbjct: 618 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDG 677
Query: 566 E-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
E F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++T
Sbjct: 678 EEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 737
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
G+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ T SDTHD KC RC
Sbjct: 738 GTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPGTNSDTHDTFKCKRC 797
Query: 685 -VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
+G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 798 KPDGRQYIKSPAM---LYGDTSTWNHFVNEGLKPIQDLLLRQECGEPEVSAVF 847
>gi|261203723|ref|XP_002629075.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
gi|239586860|gb|EEQ69503.1| dsDNA-dependent ATPase Rad54 [Ajellomyces dermatitidis SLH14081]
Length = 828
Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/693 (50%), Positives = 444/693 (64%), Gaps = 66/693 (9%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
QI + F +P++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 113 QIFKQRFSIPLMNKNSGAYNPNRPAPILGMRSGTTFVVKPLHDPSGEFAIVLYDPTIDDK 172
Query: 118 -----------------------PQLSA-------HDLLKIDKD---KIQVHVVVDPVLS 144
P+L A D+L I K + +V VV+DP L+
Sbjct: 173 PVDPNDANDGNEERKEGEKKNDPPKLDAPLVHKSLADILGIKKKVDARPRVPVVIDPRLA 232
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KP 203
+LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A K
Sbjct: 233 KVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKT 292
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPV 261
I K +I PS+LVKNW NE+ KWLG G V+ IDG SKAE+ ++L + + GR V
Sbjct: 293 TIQKCVIACPSTLVKNWANELVKWLGEGAVSPFVIDGKASKAELISQLRQWAVSSGRAVV 352
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
P+L++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTP
Sbjct: 353 RPVLIVSYETLRLNVDELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTP 412
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL EYFSL++F N ILGT EF K+YE PILRG+D+ A+D +R K +E + +L+ +
Sbjct: 413 IQNDLSEYFSLLNFANPNILGTRSEFHKKYEMPILRGRDADATDEDRKKGDESVTELLNV 472
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
VN+ +IRRT+ +LSKYLPVK E VV + Q +LY + I+S ++ ++G G
Sbjct: 473 VNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNHFIQSPDIKSLLRGK-----GS 527
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAK 498
L +I LKKLCNHPDL + G D + P Y G+ + S K
Sbjct: 528 QPLKAIGLLKKLCNHPDL----LNLGTD-LPGSEQFFPDDYVPMECRGRDRDVRSWYSGK 582
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+
Sbjct: 583 MMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVD 642
Query: 559 TFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CF
Sbjct: 643 KFNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCF 702
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHD 677
VYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD
Sbjct: 703 VYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTRSDTHD 762
Query: 678 KIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
KC RC +G Q ++ P + D S W+H
Sbjct: 763 TFKCKRCRPDGTQHIRAPAM---MYGDTSSWNH 792
>gi|317031306|ref|XP_001393160.2| DNA repair protein rhp54 [Aspergillus niger CBS 513.88]
Length = 813
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/682 (51%), Positives = 445/682 (65%), Gaps = 62/682 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
FK+P++N + Y++ LG+R +GA K LHDP+ A+VLY P
Sbjct: 110 FKIPLINKSSDAYNSSRPAPTLGMR-QGATFVVKPLHDPSGEFAIVLYDPTVDDVNEPEV 168
Query: 118 ------------PQL-------SAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGV 155
P+L S D+L + K + +V VV+DP L+ +LRPHQ EGV
Sbjct: 169 KEGATADTEEQKPKLDEPLVHKSLADILGLKKKTEGRPKVPVVIDPRLAKVLRPHQVEGV 228
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVAPS 214
KF+Y C TG+ ++A GCIMAD MGLGKTLQCI+LMWTLL+Q P A I K II PS
Sbjct: 229 KFLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPS 288
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
SLV NW NE+ KWLG + +DG SK E+ +++ + GR V P+L+ISYET
Sbjct: 289 SLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVRPVLIISYETL 348
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ES T+ AL GL +RRV+LSGTPIQNDL EYF+L
Sbjct: 349 RLYVDTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFAL 408
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
+HF N +LG+ EFRK++E PILRG+D+ ++ + K +ERL +L GIVN+ +IRRT+
Sbjct: 409 LHFANPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTND 468
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV M+ Q LY + I+S ++ ++G G L +I LKK
Sbjct: 469 ILSKYLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGK-----GSQPLKAIGLLKK 523
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL+ + G E P Y G+ + S K+MVLD MLA I
Sbjct: 524 LCNHPDLL--NLSNDLPGCEYT---FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARI 578
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+ KR K+V+ FN E F+
Sbjct: 579 RQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFV 638
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 639 FLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 698
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 699 EKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPDG 758
Query: 688 IQ-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 759 TQYIKAPAM---LYGDTSTWNH 777
>gi|380493077|emb|CCF34140.1| DNA repair protein rhp54 [Colletotrichum higginsianum]
Length = 806
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/713 (49%), Positives = 450/713 (63%), Gaps = 63/713 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTPP----- 118
+ K F VP++N G Y+ LG+R K LHDP+ ++VLY P
Sbjct: 102 VFRKAFSVPLINKNSGTYNPNRPPPTLGLRTGATFIAKPLHDPSGEFSIVLYDPTVDDKP 161
Query: 119 --------QLSAHDLLKID--------------KDKIQ-----VHVVVDPVLSNILRPHQ 151
+ A KID K K++ V VV+DP L+ +LRPHQ
Sbjct: 162 KEPEKKQDKKDAEGETKIDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQ 221
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAII 210
EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+
Sbjct: 222 VEGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKGTIQKAIV 281
Query: 211 VAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
PSSLV+NW NE+ KWLG + IDG SK E+ +L + GR P++++S
Sbjct: 282 ACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVS 341
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
YET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL E
Sbjct: 342 YETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNLNVTRRVILSGTPIQNDLSE 401
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
YFSL+ F N +LGT +FRK++E PILRG+D+ A++AER K +E L +L+GIVN+ +IR
Sbjct: 402 YFSLISFANPDLLGTRLDFRKRFELPILRGRDADAAEAERKKGDECLSELLGIVNKFIIR 461
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
RT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L +I
Sbjct: 462 RTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPEIQALLRGK-----GSQPLKAIN 516
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTM 505
LKKLCNHPDL+ AD + + P Y G+ + S K+ VLD M
Sbjct: 517 ILKKLCNHPDLL-----NIADDLPGSEDCYPDDYVPKEARGRDRDVKPWYSGKMQVLDRM 571
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
LA I+ T+DKIVL+SNYTQTLDLFE+L + R Y +RLDG+M + KR K+V+ FN
Sbjct: 572 LARIRQDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPDG 631
Query: 566 E-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
E F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++T
Sbjct: 632 EEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 691
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
G+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ T SDTHD KC RC
Sbjct: 692 GTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPGTNSDTHDTFKCKRC 751
Query: 685 -VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
+G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 752 KPDGRQYIKSPAM---LYGDTSTWNHFVNEALKPIQDLLLRQECGEPEVSAVF 801
>gi|408389789|gb|EKJ69216.1| hypothetical protein FPSE_10614 [Fusarium pseudograminearum CS3096]
Length = 805
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/795 (47%), Positives = 480/795 (60%), Gaps = 78/795 (9%)
Query: 1 RRSLAPSQLSK-RSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNE---DEPNS---KL 53
+R PS + + P PG P V + R + G D E D+P S +L
Sbjct: 21 KRMPTPSSIDRLHKPFKCPGAAGRSPAVDRPSRK-RRKVDYGGADGEADSDKPYSNDDRL 79
Query: 54 PMTKEEMSEHENLIRQ----ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKA 102
+T + + + + + K F VP+ N Y+ LG+R +GA K
Sbjct: 80 AITTRDNNRYPVFEPKDKLLVFRKSFSVPLKNKDSTAYNPNRAPPTLGLR-QGAVFVAKP 138
Query: 103 LHDPTAPNALVLYTPP----------------------QLSA---HDLL--------KID 129
LHDP+ A+VLY P +L A H L K D
Sbjct: 139 LHDPSGEFAIVLYDPTIDDKPKDMPKAIEPTKAETPEEKLDAPLVHKSLAEILGIKKKTD 198
Query: 130 KDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCIT 189
+ +V VV+DP L+ ILRPHQ EGVKFMY+CVTG+ E A GCIMADEMGLGKTLQCI+
Sbjct: 199 DEHPRVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLIDEKANGCIMADEMGLGKTLQCIS 258
Query: 190 LMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEID 246
LMWTLL+Q P A K I KAI+V P+SLVKNW NE+TKWLG + IDG SK E+
Sbjct: 259 LMWTLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKDELT 318
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+L + GR P++++SYET R + L ++GL+ CDEGHRLKN +S T+ AL
Sbjct: 319 RQLRQWAHATGRSVTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNTFNAL 378
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L RRV+L+GTPIQNDL EYFSL F N +LGT EFRK+YE PILRG+D+ AS+A
Sbjct: 379 NSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEA 438
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+R K +E L+G+VN+ LIRRT+ +LSKYLPVK E VV + Q +LY IKS
Sbjct: 439 DRKKGDECTAALLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPE 498
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
++ ++G G L +I LKKLCNHPDL+ +D + P Y
Sbjct: 499 IQALLRGK-----GSQPLKAINILKKLCNHPDLL-----NMSDDLPGSEKCYPDDYVPKE 548
Query: 487 KSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
G+ + S K+ VLD MLA I+ T+DKIVL+SNYT TLDLFE+L + R Y +R
Sbjct: 549 ARGRDREVKSWYSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLR 608
Query: 544 LDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
LDG+M + KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRLV+FDPDWNPA D Q
Sbjct: 609 LDGTMNVNKRQKLVDRFNDPEGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQ 668
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR
Sbjct: 669 ALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLR 728
Query: 663 SLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDP 718
LFQ +T SDTH+ KC RC +G Q +K P + D S W+H + + + D
Sbjct: 729 ELFQYRSDTKSDTHETFKCKRCKPDGKQYIKAPAM---LYGDTSTWNHFVNEGLKPIQDL 785
Query: 719 ILKH-CWGAGVSFVF 732
+L+ C A VS VF
Sbjct: 786 LLRQECGEAEVSAVF 800
>gi|134077689|emb|CAK45729.1| unnamed protein product [Aspergillus niger]
Length = 846
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/682 (51%), Positives = 445/682 (65%), Gaps = 62/682 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
FK+P++N + Y++ LG+R +GA K LHDP+ A+VLY P
Sbjct: 143 FKIPLINKSSDAYNSSRPAPTLGMR-QGATFVVKPLHDPSGEFAIVLYDPTVDDVNEPEV 201
Query: 118 ------------PQL-------SAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGV 155
P+L S D+L + K + +V VV+DP L+ +LRPHQ EGV
Sbjct: 202 KEGATADTEEQKPKLDEPLVHKSLADILGLKKKTEGRPKVPVVIDPRLAKVLRPHQVEGV 261
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVAPS 214
KF+Y C TG+ ++A GCIMAD MGLGKTLQCI+LMWTLL+Q P A I K II PS
Sbjct: 262 KFLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPS 321
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
SLV NW NE+ KWLG + +DG SK E+ +++ + GR V P+L+ISYET
Sbjct: 322 SLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVRPVLIISYETL 381
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ES T+ AL GL +RRV+LSGTPIQNDL EYF+L
Sbjct: 382 RLYVDTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFAL 441
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
+HF N +LG+ EFRK++E PILRG+D+ ++ + K +ERL +L GIVN+ +IRRT+
Sbjct: 442 LHFANPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTND 501
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV M+ Q LY + I+S ++ ++G G L +I LKK
Sbjct: 502 ILSKYLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGK-----GSQPLKAIGLLKK 556
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL+ + G E P Y G+ + S K+MVLD MLA I
Sbjct: 557 LCNHPDLL--NLSNDLPGCEYT---FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARI 611
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+ KR K+V+ FN E F+
Sbjct: 612 RQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFV 671
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 672 FLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 731
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 732 EKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPDG 791
Query: 688 IQ-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 792 TQYIKAPAM---LYGDTSTWNH 810
>gi|302408325|ref|XP_003001997.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
gi|261358918|gb|EEY21346.1| DNA repair and recombination protein RAD54 [Verticillium albo-atrum
VaMs.102]
Length = 857
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/712 (49%), Positives = 456/712 (64%), Gaps = 62/712 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTP-----P 118
+ K F VP++N GGY+ LG+R KALHDP+ A+VLY P P
Sbjct: 154 VFRKAFAVPLINKNVGGYNPNRPPPTLGLRTGATFVAKALHDPSGEFAIVLYDPTVDDKP 213
Query: 119 QL---------------------SAHDLL----KIDKDKIQVHVVVDPVLSNILRPHQRE 153
++ S ++L K++ + +V VV+DP L +LRPHQ E
Sbjct: 214 KVPEKPKDEPEPTTTIDAPLMHKSLAEILGIKKKVEGEHPKVPVVIDPRLCKVLRPHQIE 273
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVA 212
GVKFMY+CVTG+ E A GCIMADEMGLGKTLQCI L+WTLL+Q P A K I KAI+V
Sbjct: 274 GVKFMYKCVTGMIDERANGCIMADEMGLGKTLQCIALLWTLLKQSPEAGKSAIQKAIVVC 333
Query: 213 PSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYE 270
PSSLVKNW NE+ KWLG V IDG SK E+ +L + GR P++++SYE
Sbjct: 334 PSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIASGRAVTRPVIIVSYE 393
Query: 271 TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
T R + L ++GL+LCDEGHRLKN +SQT+ +L L RR++LSGTPIQNDL EYF
Sbjct: 394 TLRLNVDELKHTKIGLMLCDEGHRLKNGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEYF 453
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT 390
SL+ F N +LGT EFRK++E PILRG+D+ A + +R K +E L +L+GIVN+ +IRRT
Sbjct: 454 SLISFANPDLLGTRLEFRKRFELPILRGRDADADEVDRKKGDECLSELLGIVNKFIIRRT 513
Query: 391 SALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSL 450
+ +LSKYLPVK E VV + Q +LY + S ++ ++G G L +I L
Sbjct: 514 NDILSKYLPVKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLRGK-----GSQPLKAINIL 568
Query: 451 KKLCNHPDLVMDKIQTGADGFENAMNILPTGY----AASYKSGKLLIELSAKLMVLDTML 506
KKLCNHPDL+ D + N P Y A +++ ++ S K+ VLD ML
Sbjct: 569 KKLCNHPDLL-----NLNDDLPGSENCWPDDYVPKDARGHRNREVKPWYSGKMQVLDRML 623
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE 566
A I+ T+DKIVL+SNYTQTLD+FERL + R Y +RLDG+M + KR K+V+ FN + E
Sbjct: 624 ARIRQDTNDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPAGE 683
Query: 567 -FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
F+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG
Sbjct: 684 EFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 743
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC- 684
+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ T SDTHD KC RC
Sbjct: 744 TIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDGLRELFQYRPGTTSDTHDTFKCKRCK 803
Query: 685 VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
+G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 804 PDGRQHIKAPAM---LYGDTSTWNHFINEHLKPIQDLLLRQECGEPEVSAVF 852
>gi|46127169|ref|XP_388138.1| hypothetical protein FG07962.1 [Gibberella zeae PH-1]
Length = 856
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/795 (46%), Positives = 480/795 (60%), Gaps = 78/795 (9%)
Query: 1 RRSLAPSQLSK-RSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNE---DEPNS---KL 53
+R PS + + P PG P V + R + G D E D+P S +L
Sbjct: 72 KRMPTPSSIDRLHKPFKCPGAAGRSPAVDRPSRK-RRKVDYGGADGEADSDKPYSNDDRL 130
Query: 54 PMTKEEMSEHENLIRQ----ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKA 102
+T + + + + + K F VP+ N Y+ LG+R +GA K
Sbjct: 131 AITTRDNNRYPVFEPKDKLLVFRKSFSVPLKNKDSTAYNPNRAPPTLGLR-QGAVFVAKP 189
Query: 103 LHDPTAPNALVLYTPP----------------------QLSA---HDLL--------KID 129
LHDP+ ++VLY P +L A H L K D
Sbjct: 190 LHDPSGEFSIVLYDPTIDDKPKDMPKAIEPTKAETLEEKLDAPLVHKSLAEILGIKKKTD 249
Query: 130 KDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCIT 189
+ +V VV+DP L+ ILRPHQ EGVKFMY+CVTG+ E A GCIMADEMGLGKTLQCI+
Sbjct: 250 DEHPRVPVVIDPRLAKILRPHQVEGVKFMYQCVTGLIDEKANGCIMADEMGLGKTLQCIS 309
Query: 190 LMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEID 246
LMWTLL+Q P A K I KAI+V P+SLVKNW NE+TKWLG + IDG SK E+
Sbjct: 310 LMWTLLKQSPDAGKSTIQKAIVVCPASLVKNWANELTKWLGANAINPFAIDGKASKEELT 369
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+L + GR P++++SYET R + L ++GL+ CDEGHRLKN +S T+ AL
Sbjct: 370 RQLRQWANATGRSVTRPVIIVSYETLRLNVEELKNTKIGLLFCDEGHRLKNSDSNTFNAL 429
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L RRV+L+GTPIQNDL EYFSL F N +LGT EFRK+YE PILRG+D+ AS+A
Sbjct: 430 NSLNVSRRVILTGTPIQNDLTEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEA 489
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+R K +E L+G+VN+ LIRRT+ +LSKYLPVK E VV + Q +LY IKS
Sbjct: 490 DRKKGDECTAALLGVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPE 549
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
++ ++G G L +I LKKLCNHPDL+ +D + P Y
Sbjct: 550 IQALLRGK-----GSQPLKAINILKKLCNHPDLL-----NMSDDLPGSEKCYPDDYVPKE 599
Query: 487 KSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
G+ + S K+ VLD MLA I+ T+DKIVL+SNYT TLDLFE+L + R Y +R
Sbjct: 600 ARGRDREVKSWYSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLR 659
Query: 544 LDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
LDG+M + KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRLV+FDPDWNPA D Q
Sbjct: 660 LDGTMNVNKRQKLVDRFNDPEGDEFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQ 719
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR
Sbjct: 720 ALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLR 779
Query: 663 SLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDP 718
LFQ +T SDTH+ KC RC +G Q +K P + D S W+H + + + D
Sbjct: 780 ELFQYRSDTKSDTHETFKCKRCKPDGKQYIKAPAM---LYGDTSTWNHFVNEGLKPIQDL 836
Query: 719 ILKH-CWGAGVSFVF 732
+L+ C A VS VF
Sbjct: 837 LLRQECGEAEVSAVF 851
>gi|346976842|gb|EGY20294.1| DNA repair and recombination protein RAD54 [Verticillium dahliae
VdLs.17]
Length = 822
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/660 (51%), Positives = 433/660 (65%), Gaps = 56/660 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP----- 117
+ K F VP++N GGY+ LG+R GA KALHDP+ A+VLY P
Sbjct: 157 VFRKAFAVPLINKNVGGYNPNRPPPTLGLR-TGATFVAKALHDPSGEFAIVLYDPTVDDK 215
Query: 118 ---PQLSA--------------HDLL--------KIDKDKIQVHVVVDPVLSNILRPHQR 152
P+ S H L K++ + +V VV+DP L +LRPHQ
Sbjct: 216 PKVPEKSKDEPEPTTTIDAPLMHKSLAEILGIKKKVEGEHPKVPVVIDPRLCKVLRPHQI 275
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKFMY+CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+V
Sbjct: 276 EGVKFMYKCVTGMIDERANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKSAIQKAIVV 335
Query: 212 APSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
PSSLVKNW NE+ KWLG V IDG SK E+ +L + GR P++++SY
Sbjct: 336 CPSSLVKNWANELVKWLGADAVTPFAIDGKASKEELTRQLRQWAIASGRAVTRPVIIVSY 395
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R + L ++GL+LCDEGHRLKN +SQT+ +L L RR++LSGTPIQNDL EY
Sbjct: 396 ETLRLNVDELKHTKIGLMLCDEGHRLKNGDSQTFSSLNSLNVSRRIILSGTPIQNDLSEY 455
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
FSL+ F N +LGT EFRK++E PILRG+D+ A + +R K +E L +L+GIVN+ +IRR
Sbjct: 456 FSLISFANPDLLGTRLEFRKRFELPILRGRDADADETDRKKGDECLSELLGIVNKFIIRR 515
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ +LSKYLPVK E VV + Q +LY + S ++ ++G G L +I
Sbjct: 516 TNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLRGK-----GSQPLKAINI 570
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGY----AASYKSGKLLIELSAKLMVLDTM 505
LKKLCNHPDL+ D + N P Y A +++ ++ S K+ VLD M
Sbjct: 571 LKKLCNHPDLL-----NLNDDLPGSENCWPDDYVPKDARGHRNREVKPWYSGKMQVLDRM 625
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
LA I+ T+DKIVL+SNYTQTLD+FERL + R Y +RLDG+M + KR K+V+ FN T
Sbjct: 626 LARIRQDTNDKIVLISNYTQTLDIFERLCRSRAYGCLRLDGTMNVNKRQKLVDKFNDPTG 685
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++T
Sbjct: 686 EEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIAT 745
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
G+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ T SDTHD KC RC
Sbjct: 746 GTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDGLRELFQYRPGTTSDTHDTFKCKRC 805
>gi|119472846|ref|XP_001258430.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL
181]
gi|119406582|gb|EAW16533.1| SNF2 family N-terminal domain protein [Neosartorya fischeri NRRL
181]
Length = 835
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/775 (46%), Positives = 478/775 (61%), Gaps = 88/775 (11%)
Query: 1 RRSLAPSQLSKRS-PEDSPGIKTFPPPVKKEKRSCTSRKPL--GSVDNEDEPNSKLPMTK 57
+RS++ + + + S P PG T P + + R+ + + E E NS P T
Sbjct: 46 QRSVSSNSIDRLSKPFKCPGSAT---PTRTSDKPARKRRKVNYAGAEGEVEDNSVKPWTN 102
Query: 58 EE----------------MSEHENLIRQILAKPFKVPILNYTGGGYS----TKALGVRRE 97
EE + + E +Q F++P++N + Y+ LG+R +
Sbjct: 103 EERLALATRDANKFPVFKVKDKETTFKQ----RFRIPLINKSSDEYNPSRPAPTLGMR-Q 157
Query: 98 GAR---KALHDPTAPNALVLYTP---------------------------PQL--SAHDL 125
GA K LHDP+ A+VLY P P + S D+
Sbjct: 158 GATFVVKPLHDPSGEFAIVLYDPTVDDIDETPESMPEDKGTEETKAKLDEPLMHKSLADI 217
Query: 126 LKIDK---DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLG 182
L + K + +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A GCIMAD MGLG
Sbjct: 218 LGLKKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANGCIMADGMGLG 277
Query: 183 KTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG- 239
KTLQCI+LMWTLL+Q P A K I K II PSSLV NW NE+ KWLG + IDG
Sbjct: 278 KTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAIDGK 337
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
SKAE+ +++ + GR V P+L++SYET R + L + +GL+LCDEGHRLKN +
Sbjct: 338 ASKAELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKNKD 397
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
S T+ AL L RRV+LSGTPIQNDL EYF+L+HF N +LG+ EFRK++E PIL+G+
Sbjct: 398 SLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILKGR 457
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D+ ++ +R K +ERL +L GIVN+ +IRRT+ +LSKYLP+K E VV ++ Q +LY
Sbjct: 458 DAAGTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSRFQLDLYN 517
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
+ I+S ++ ++G G L +I LKKLCNHPDL+ + G E+ P
Sbjct: 518 HFIQSPEIKSLLRGK-----GSQPLKAIGILKKLCNHPDLL--DLTRDLPGCEHT---FP 567
Query: 480 TGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
Y G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+L +
Sbjct: 568 EDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRS 627
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
RGY +RLDG+M I KR K+V+ FN E F+F+LSSKAGGCGLNLIGANRLV+FDPDW
Sbjct: 628 RGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDW 687
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV RH
Sbjct: 688 NPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERH 747
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
FS+ LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 748 FSLESLRELFQFKPETRSDTHDTFKCKRCRPDGTQYIKAPAM---LYGDTSSWNH 799
>gi|115389990|ref|XP_001212500.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
gi|114194896|gb|EAU36596.1| DNA repair and recombination protein RAD54 [Aspergillus terreus
NIH2624]
Length = 821
Score = 644 bits (1661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/683 (50%), Positives = 448/683 (65%), Gaps = 63/683 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
FK+P++N + Y++ LG+R +GA K LHDP+ A+VLY P
Sbjct: 117 FKIPLINKSSDAYNSSRPAPTLGMR-QGATFVVKPLHDPSGEFAIVLYDPTVDDVDDAEE 175
Query: 118 -------------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREG 154
P+L S D+L + K + +V VV+DP L+ +LRPHQ EG
Sbjct: 176 QKKEEEQKPEDDKPKLDEPIVHKSLADILGLKKKVDSRPKVPVVIDPRLAKVLRPHQVEG 235
Query: 155 VKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAP 213
VKF+Y C TG+ ++A+GCIMAD MGLGKTLQCI+LMWTLL+Q P A K I K II P
Sbjct: 236 VKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACP 295
Query: 214 SSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYET 271
SSLV NW NE+ KWLG + +DG +K E+ ++ + GR V P+L++SYET
Sbjct: 296 SSLVGNWANELGKWLGKDAITPFAVDGKATKTELTTQIKQWAIASGRSVVRPVLIVSYET 355
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
R + L + +GL+LCDEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYF+
Sbjct: 356 LRLYVDALKDSPIGLLLCDEGHRLKNKDSLTWTALNSLNVQRRVILSGTPIQNDLTEYFA 415
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
L++F N +LGT EFRK++E PILRG+D+ ++ +R K +ERL +L IVN+ +IRRT+
Sbjct: 416 LLNFANPDLLGTQNEFRKRFELPILRGRDAAGTEEDRKKGDERLAELSSIVNKFIIRRTN 475
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+LSKYLPVK E VV ++ Q +LY + I+S ++ ++G G L +I LK
Sbjct: 476 DILSKYLPVKYEHVVFCNLSPFQLDLYNHFIQSPEIKSLLRGK-----GSQPLKAIGILK 530
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAV 508
KLCNHPDL+ + G E+A P Y G+ + S K+MVLD MLA
Sbjct: 531 KLCNHPDLL--NLSNDLPGCEHA---FPDDYVPPEGRGRDRDIKSWYSGKMMVLDRMLAR 585
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-F 567
I+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+M +KKR K+V+ FN E F
Sbjct: 586 IRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNVKKRQKLVDKFNDPDGEEF 645
Query: 568 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSI
Sbjct: 646 VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSI 705
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VN 686
EEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +
Sbjct: 706 EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPD 765
Query: 687 GIQ-VKPPPLESDCTDDLSCWHH 708
G Q +K P + D S W+H
Sbjct: 766 GTQYIKAPAM---LYGDTSSWNH 785
>gi|146324514|ref|XP_751168.2| dsDNA-dependent ATPase Rad54 [Aspergillus fumigatus Af293]
gi|129557284|gb|EAL89130.2| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus
Af293]
Length = 807
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/732 (48%), Positives = 457/732 (62%), Gaps = 82/732 (11%)
Query: 41 GSVDNEDEPNSKLPMTKEE----------------MSEHENLIRQILAKPFKVPILNYTG 84
D E E NS P T EE + + E +Q F++P++N +
Sbjct: 58 AGADGEVEDNSVKPWTNEERLALATRDANKFPVFKVKDKETTFKQ----RFRIPLINKSS 113
Query: 85 GGYS----TKALGVRREGAR---KALHDPTAPNALVLYTPP------------------- 118
Y+ LG+R +GA K LHDP+ A+VLY P
Sbjct: 114 NDYNPSRPAPTLGMR-QGATFVVKPLHDPSGEFAIVLYDPTVDDIGEAPESMPEDKGIEE 172
Query: 119 ----------QLSAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
S D+L + K + +V VV+DP L+ +LRPHQ EGVKF+Y C TG+
Sbjct: 173 TKAKLDEPLVHKSLADILGLKKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGL 232
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEI 224
++A GCIMAD MGLGKTLQCI+LMWTLL+Q P A K I K II PSSLV NW NE+
Sbjct: 233 IDKNANGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKSTIQKCIIACPSSLVGNWANEL 292
Query: 225 TKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
KWLG + IDG SKAE+ +++ + GR V P+L++SYET R + L +
Sbjct: 293 VKWLGKDAITPFAIDGKASKAELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVDALKDS 352
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
+GL+LCDEGHRLKN +S T+ AL L RRV+LSGTPIQNDL EYF+L+HF N +LG
Sbjct: 353 PIGLLLCDEGHRLKNKDSLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLG 412
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
+ EFRK++E PIL+G+D+ ++ +R K +ERL +L GIVN+ +IRRT+ +LSKYLP+K
Sbjct: 413 SQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKY 472
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
E VV ++ Q +LY + I+S ++ ++G G L +I LKKLCNHPDL+
Sbjct: 473 EHVVFCNLSQFQLDLYNHFIQSPEIKSLLRGK-----GSQPLKAIGILKKLCNHPDLL-- 525
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ G E+ P Y G+ + S K+MVLD MLA I+ T+DKIVL
Sbjct: 526 DLTRDLPGCEHT---FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVL 582
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGC 578
+SNYTQTLDLFE+L + RGY +RLDG+M I KR K+V+ FN E F+F+LSSKAGGC
Sbjct: 583 ISNYTQTLDLFEKLCRSRGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGC 642
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK
Sbjct: 643 GLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHK 702
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLE 696
++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G Q +K P +
Sbjct: 703 QSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPDGTQYIKAPAM- 761
Query: 697 SDCTDDLSCWHH 708
D S W+H
Sbjct: 762 --LYGDTSSWNH 771
>gi|315053993|ref|XP_003176371.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311338217|gb|EFQ97419.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 831
Score = 644 bits (1660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/682 (50%), Positives = 444/682 (65%), Gaps = 58/682 (8%)
Query: 75 FKVPILNYTGGGYST----KALGVRREGAR--KALHDPTAPNALVLYTPP---------- 118
F VP+++ + G YS+ LG+R + K LHDP+ A+VLY P
Sbjct: 124 FHVPLIDKSSGDYSSGRAAPTLGMRCGASFVVKPLHDPSGEFAIVLYDPTIDDKPNNKEE 183
Query: 119 -----------------------QLSAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQR 152
S ++L I K+ + +V VV+DP L+ ILRPHQ
Sbjct: 184 NKENSENKDGKEVEQKKLDQPLVHKSLAEILGIKKNVDERPKVPVVIDPRLAKILRPHQI 243
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKF+Y C TG+ ++A GCIMAD MGLGKTLQCITLMWTLL+Q P A KP + KA+I
Sbjct: 244 EGVKFLYRCTTGLVDKNANGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKPTVQKAVIA 303
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
P++LV NW NE+ KWLG + IDG SKAE+ ++L + GR V P+L++SY
Sbjct: 304 CPATLVGNWANELVKWLGKDAINPFVIDGKASKAELISQLRQWAIASGRSVVRPVLIVSY 363
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R ++ L ++GL+LCDEGHRLKN +SQTY AL L ++RV+LSGTPIQNDL EY
Sbjct: 364 ETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTPIQNDLSEY 423
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
FSL+ F N GILG+ EF K YE PILRG+D+ +D ++ K NERL +L+ +VN+ +IRR
Sbjct: 424 FSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQQKGNERLAELLNLVNKFIIRR 483
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LLSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I
Sbjct: 484 SNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGK-----GSQPLKAIGI 538
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
LKKLCNHPDL+ K+ G E T ++ S K+MVLD MLA I
Sbjct: 539 LKKLCNHPDLL--KLSEDLPGCEQYFPEDMTVSNGRRGDREVKSWYSGKMMVLDRMLARI 596
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFI 568
+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M +KKR+K+V+ FN EF+
Sbjct: 597 RQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEFV 656
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQ K CFVYRF++TG+IE
Sbjct: 657 FLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTIE 716
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + +T SDTHD KC RC +G
Sbjct: 717 EKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTTSDTHDTFKCKRCRPDG 776
Query: 688 IQ-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 777 AQHIKAPAM---LYGDTSSWNH 795
>gi|358394253|gb|EHK43646.1| hypothetical protein TRIATDRAFT_319009 [Trichoderma atroviride IMI
206040]
Length = 802
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/712 (48%), Positives = 449/712 (63%), Gaps = 62/712 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTPPQLSAH 123
+ K F +P+ + T G Y + LG+RR + LHDP+ A+VLY P S
Sbjct: 99 VFRKAFSIPLKDKTQGDYGSSRPPPTLGLRRGAVFVPRPLHDPSGEFAIVLYDPTVDSKP 158
Query: 124 DLL-------------------------------KIDKDKIQVHVVVDPVLSNILRPHQR 152
D++ +++ D +V VV+DP ++ LRPHQ
Sbjct: 159 DIIQENVVPKEVEPSKLDAPIVHKSLAEILGIQKQVETDHPKVPVVIDPKIAKCLRPHQI 218
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKFMY+CVTG+ E A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I KAI+V
Sbjct: 219 EGVKFMYKCVTGLVDEKAQGCIMADEMGLGKTLQCITLMWTLLKQSPSAGKSTIQKAIVV 278
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
P+SLVKNW NE+TKWLG + IDG K E+ +L + GR P++++SY
Sbjct: 279 CPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQLRQWAIASGRSVTRPVIIVSY 338
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R + L ++GL+ CDEGHRLKN +S T+ AL LK RRV+L+GTPIQNDL EY
Sbjct: 339 ETLRLNVEELKHTKIGLLFCDEGHRLKNADSNTFNALNDLKVSRRVILTGTPIQNDLTEY 398
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
F+L F N +LG+ EFRK++E PILRG+D+ AS+ +R + +E +L+G+VN+ LIRR
Sbjct: 399 FALTSFANPDLLGSRLEFRKRFEIPILRGRDADASEQDRRRGDECTSELLGVVNKFLIRR 458
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L +I
Sbjct: 459 TNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLKAINI 513
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTML 506
LKKLCNHPDL+ AD + P Y G+ + S K+ VLD ML
Sbjct: 514 LKKLCNHPDLL-----NLADDLPGSEKCFPGDYVPKESRGRDRDIKPWYSGKMQVLDRML 568
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSN 565
A I+ T+DKIVL+SNYT TLDLFERL + R Y +RLDG+M + KR K+V+ FN +
Sbjct: 569 AKIREDTNDKIVLISNYTSTLDLFERLCRDRQYGCLRLDGTMNVNKRQKLVDRFNDPNGD 628
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
EFIF+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG
Sbjct: 629 EFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 688
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC- 684
+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTHD KC RC
Sbjct: 689 TIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTTSDTHDTFKCKRCK 748
Query: 685 VNGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKHCW-GAGVSFVF 732
+G Q +K P + D S W+H + + D +L+ + G+ VS VF
Sbjct: 749 SDGRQFIKAPAM---LYGDTSTWNHFVNSQLQPIQDLLLRQEYAGSEVSAVF 797
>gi|340931904|gb|EGS19437.1| DNA repair and recombination protein RAD54-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 838
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/711 (49%), Positives = 453/711 (63%), Gaps = 57/711 (8%)
Query: 69 QILAKPFKVPILNYT--GGGYSTKALGVRREGA--RKALHDPTAPNALVLYTP------- 117
Q+ K F VP++N + +LG+RR K LHDP A+VLY P
Sbjct: 138 QVFRKAFSVPLINKSSYNPNRPPPSLGLRRGTVFVAKPLHDPCGEFAIVLYDPTIDDKPK 197
Query: 118 ----------------PQL--SAHDLLKIDKDKI----QVHVVVDPVLSNILRPHQREGV 155
P + S ++L I K + +V VV+DP L+ +LRPHQ EGV
Sbjct: 198 DAPPPEEKEPEKKPEGPSMHKSLAEILGIKKQPVNERPRVPVVIDPKLAKVLRPHQIEGV 257
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPS 214
KFMY CVTG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I+KAI+ PS
Sbjct: 258 KFMYRCVTGMIDPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKPTIEKAIVACPS 317
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
SLV+NW NE+ KWLG + IDG SK E+ +L+ + GR P++++SYET
Sbjct: 318 SLVRNWANELVKWLGKDAINPFTIDGKASKEELTRQLHQWAIASGRSVTRPVIIVSYETL 377
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL EYFSL
Sbjct: 378 RLNVEALKGTPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPIQNDLSEYFSL 437
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
+ F N +LG+ EFRK++E PILRG+D+ AS+AER + +E L +L+ IVN+ +IRRT+
Sbjct: 438 ISFANPDLLGSRAEFRKRFELPILRGRDADASEAERKRGDECLAELLSIVNKFIIRRTND 497
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
LLSKYLPVK E VV + Q +LY I S ++ ++G G L +I LKK
Sbjct: 498 LLSKYLPVKYEHVVFCNLAPFQADLYNYFITSPDIQALLRGK-----GSQPLKAIGILKK 552
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL+ + G E P + G+ + S K++VLD MLA I
Sbjct: 553 LCNHPDLL--DLPGDLPGCE---QYFPEDFVPKDARGRDRDVKSWYSGKMIVLDRMLARI 607
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFI 568
+ T+DKIVL+SNYTQTLDLFERL + RGY +RLDG+M + KR ++V+ FN +EF+
Sbjct: 608 RAETNDKIVLISNYTQTLDLFERLCRSRGYGCLRLDGTMNVNKRQRLVDKFNDPNGDEFV 667
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IE
Sbjct: 668 FLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIE 727
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK++LS CVVD EDV RHFS+ LR LFQ +T SDTHD KC RC +G
Sbjct: 728 EKIFQRQSHKQSLSYCVVDSAEDVERHFSLDALRELFQYRPDTRSDTHDTFKCKRCKPDG 787
Query: 688 IQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWGAGVSFVFYQH 735
Q +K P + D S W+H + + + D +LK G + +Q+
Sbjct: 788 KQFIKAPAM---LYGDTSTWNHFVNEGLKNIEDHLLKQECGEPIVSAVFQY 835
>gi|347827598|emb|CCD43295.1| similar to DNA repair and recombination protein RAD54 [Botryotinia
fuckeliana]
Length = 862
Score = 643 bits (1658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/726 (49%), Positives = 456/726 (62%), Gaps = 76/726 (10%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
+ K F VP++N GGGY+ LG+R +GA KALHDP+ A+VLY P
Sbjct: 145 MFRKRFSVPLINKDGGGYNPNRPPPTLGLR-QGAVFVAKALHDPSGEFAIVLYDPTIDEK 203
Query: 118 ---------------------------PQLS-----AH----DLLKIDK----DKIQVHV 137
P L AH ++L I K ++ +V V
Sbjct: 204 PRSIEQAKKEEEDAKKETEKKDGEPEKPVLKLDAPLAHKSLAEILGIKKVVEGERPKVPV 263
Query: 138 VVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQ 197
V+DP L+ +LRPHQ EGVKFMY CVTG+ + A GCIMADEMGLGKTLQCITLMWT+L+Q
Sbjct: 264 VIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLMWTMLKQ 323
Query: 198 GPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQ 254
A KP I+KAII PSSLVKNW NE+ KWLG + IDG SK E+ +L +
Sbjct: 324 STDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAI 383
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
GR P++++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL L RR
Sbjct: 384 ASGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNSLNVTRR 443
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
V+LSGTPIQNDL EYFSLV F N G+LGT EFRK+YE PI RG+D+ SD +R K +E
Sbjct: 444 VILSGTPIQNDLTEYFSLVSFANPGLLGTRMEFRKKYELPIQRGRDAAGSDKDRQKGDEC 503
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+++L+ +VN+ +IRRT+ +LSKYLPVK E VV + Q +LY + I S ++ ++G
Sbjct: 504 IKELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQLDLYNHFITSPDIKALLRGK 563
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---L 491
G L +I LKKLCNHPDL+ ++ P Y G+ +
Sbjct: 564 -----GSQPLKAIGMLKKLCNHPDLL-----NLSEDLPGCEQYWPEDYVPKDGRGRDRDI 613
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
S K+ VLD MLA I+ T+DKIVL+SNYTQTLD+F++L + RGY +RLDG+M +
Sbjct: 614 KPWYSGKMQVLDRMLARIRQDTNDKIVLISNYTQTLDMFDKLCRSRGYGSLRLDGTMNVT 673
Query: 552 KRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRD
Sbjct: 674 KRQKLVDKFNDPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRD 733
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ ++
Sbjct: 734 GQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRKD 793
Query: 671 TISDTHDKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKH-CWGA 726
T SDTHD KC RC +G Q ++ D S W+H + D +L+ C
Sbjct: 794 TTSDTHDTFKCKRCKPDGKQFL--KAQAMMYGDTSTWNHFVNAGLGTIQDLLLRQECGDE 851
Query: 727 GVSFVF 732
VS VF
Sbjct: 852 NVSAVF 857
>gi|440638315|gb|ELR08234.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Geomyces destructans 20631-21]
Length = 810
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/709 (49%), Positives = 453/709 (63%), Gaps = 65/709 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP-----PQL-- 120
F VP++N GGY+ LG+R +GA K LHDP A+VLY P P+
Sbjct: 111 FAVPLINKDVGGYNPNRPPPTLGLR-QGAVFVAKPLHDPAGEFAIVLYDPTIDDVPKTIE 169
Query: 121 ------SAHDLLKIDK-------------------DKIQVHVVVDPVLSNILRPHQREGV 155
S+ +++K+D+ ++ +V VV+DP L+ +LRPHQ EGV
Sbjct: 170 DAKKIESSQEVVKVDEPIIHKSLADILGIKKKVEGERPKVPVVIDPRLAKVLRPHQIEGV 229
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPS 214
KFMY+CVTG+ + A GCIMADEMGLGKTLQCITLMWTLL+Q A KP I K II PS
Sbjct: 230 KFMYKCVTGMIDDRANGCIMADEMGLGKTLQCITLMWTLLKQSTDAGKPTIQKVIIACPS 289
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
SLV+NW NE+ KWLG G + IDG SK E+ +L + GR P++++SYET
Sbjct: 290 SLVQNWANELVKWLGKGAIVPFAIDGKASKEELTQQLRQWAIASGRAVTRPVIIVSYETL 349
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL EYFSL
Sbjct: 350 RLNVDELKNTQIGLMLCDEGHRLKNGDSQTFTALNNLNVSRRVILSGTPIQNDLSEYFSL 409
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
V F N +LGT EFRK+YE PIL+G+D+ +D +R + ++ L +L+G+VN+ +IRRT+
Sbjct: 410 VSFANPDLLGTRLEFRKKYELPILKGRDAAGTDKDRERGDDCLRELLGVVNKFIIRRTND 469
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV + Q +LY I S ++ ++G G L +I LKK
Sbjct: 470 ILSKYLPVKYEHVVFCGLAPFQLDLYNYFITSPEIKALLRGK-----GSQPLKAIGMLKK 524
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL+ +D P Y G+ + S K+ VLD MLA I
Sbjct: 525 LCNHPDLL-----NLSDDLPGCEQYFPEDYVPKDARGRDRDVKPWYSGKMQVLDRMLARI 579
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFI 568
+ T+DKIVL+SNYTQTLD+F++L + RGY +RLDG+M + KR K+V+ FN EF+
Sbjct: 580 RQDTNDKIVLISNYTQTLDIFDKLCRSRGYGSLRLDGTMNVSKRQKLVDKFNDPDGPEFV 639
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IE
Sbjct: 640 FLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIE 699
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK++LSSCVVD EDV RHF++ LR LFQ T SDTHD KC RC +G
Sbjct: 700 EKIFQRQSHKQSLSSCVVDSAEDVERHFTLDSLRELFQYHGKTTSDTHDTFKCKRCKPDG 759
Query: 688 IQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWG-AGVSFVF 732
Q +K P + D S W+H + D +L+ +G VS VF
Sbjct: 760 KQFLKAPAM---LYGDTSTWNHFVNAGIEKIQDLLLRQEFGEKDVSAVF 805
>gi|327308794|ref|XP_003239088.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
gi|326459344|gb|EGD84797.1| DNA repair and recombination protein RAD54 [Trichophyton rubrum CBS
118892]
Length = 808
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/707 (49%), Positives = 454/707 (64%), Gaps = 66/707 (9%)
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYST----KALGVRREGAR---KAL 103
++ P+ K + + E RQ F VP+++ + G Y++ LG+R GA K L
Sbjct: 83 NRFPVFK--VKDKETTFRQ----RFHVPLIDKSSGNYNSGRAAPTLGMRC-GATFVVKPL 135
Query: 104 HDPTAPNALVLYTPP---------------------------------QLSAHDLLKIDK 130
HDP+ A+VLY P S ++L I K
Sbjct: 136 HDPSGEFAIVLYDPTIDDKPDEKNEGKDTAENKEGEEVEQKKLNQPLVHKSLAEILGIKK 195
Query: 131 D---KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
+ + +V VV+DP L+ ILRPHQ EGVKF+Y C TG+ ++A+GCIMAD MGLGKTLQC
Sbjct: 196 NVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQC 255
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAE 244
ITLMWTLL+Q P A KP + KA+I P++LV NW NE+ KWLG + IDG SK E
Sbjct: 256 ITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTE 315
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+ ++L + GR V P+L++SYET R ++ L ++GL+LCDEGHRLKN +SQTY
Sbjct: 316 LTSQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYV 375
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL L ++RV+LSGTPIQNDL EYFSL+ F N GILG+ EF K YE PILRG+D+ +
Sbjct: 376 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 435
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
D ++ K NERL +L+ +VN+ +IRR++ LLSKYLPVK E VV ++ Q +LY + I+S
Sbjct: 436 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLSPFQLDLYNHFIQS 495
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
++ ++G G L +I LKKLCNHPDL+ K+ G E T
Sbjct: 496 PEIKSLLRGK-----GSQPLKAIGILKKLCNHPDLL--KLSEDLPGCEQYFPEDMTVSNG 548
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
+ S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RL
Sbjct: 549 RRGDREAKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRL 608
Query: 545 DGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DG+M +KKR+K+V+ FN EF+F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA
Sbjct: 609 DGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQA 668
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
+ARVWRDGQ K CFVYRF++TG+IEEK+ QRQ+HK++LSSCV+D EDV RHFS+ LR
Sbjct: 669 LARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVIDSAEDVERHFSLDSLRE 728
Query: 664 LFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 729 LFQFKPGTTSDTHDTFKCKRCRPDGTQHIKAPAM---LYGDTSSWNH 772
>gi|225684006|gb|EEH22290.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb03]
Length = 821
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/688 (50%), Positives = 441/688 (64%), Gaps = 61/688 (8%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
QI + F +P++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 111 QIFKQRFSIPLINKNSGAYNPNRPAPILGMRSGTTFIVKPLHDPSGEFAIVLYDPTIDDK 170
Query: 118 ------------------PQLSA-------HDLLKIDKD---KIQVHVVVDPVLSNILRP 149
P+L A D+L I K + ++ VV+DP L+ +LRP
Sbjct: 171 PANRDGGESGKQAENPDIPKLDAPLVHKSLADILGIKKKVETRPRIPVVIDPRLAKVLRP 230
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKA 208
HQ EGVKF+Y C TG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I K
Sbjct: 231 HQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKTTIQKC 290
Query: 209 IIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILV 266
+I PS+LVKNW NE+ KWLG V +DG +KAE+ ++L + + GR V P+L+
Sbjct: 291 VIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQLRQWAISSGRAVVRPVLI 350
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+SYET R + + ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL
Sbjct: 351 VSYETLRLNVDEIKDTQIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDL 410
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
EYFSL++F N ILGT EF K++E PILRG+D+ +D +R K +E + +L+ IVN+ +
Sbjct: 411 SEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDRKKGDETVAELLAIVNKFI 470
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
IRRT+ +LSKYLPVK E VV + Q +LY I+S ++ ++G G L +
Sbjct: 471 IRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIKSLLRGK-----GSQPLKA 525
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLD 503
I LKKLCNHPDL + GAD P Y G+ + S K+MVLD
Sbjct: 526 IGILKKLCNHPDL----LNLGAD-LPGCEQFFPDDYIPIESRGRDRDVRSWYSGKMMVLD 580
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDGSM + KR K+V+ FN
Sbjct: 581 RMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDP 640
Query: 564 -SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF+
Sbjct: 641 EGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFI 700
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC
Sbjct: 701 ATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTRSDTHDTFKCK 760
Query: 683 RC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
RC +G Q +K P + D S W+H
Sbjct: 761 RCGPDGTQHIKAPAM---LYGDTSSWNH 785
>gi|405951944|gb|EKC19810.1| DNA repair and recombination protein RAD54-like protein
[Crassostrea gigas]
Length = 564
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/500 (63%), Positives = 378/500 (75%), Gaps = 10/500 (2%)
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
D + F+ G R +PIL+ISYETFR H++V+HK EVGLV+CDEGHRLKN E+QTYQA
Sbjct: 74 DAGADQFVTLKGGRNPHPILIISYETFRLHSTVMHKGEVGLVICDEGHRLKNSENQTYQA 133
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L G++A+RRVLLSGTPIQNDLLEYFSLVHFVN GILGTAQEF+K++ETPILRG+D+ A+D
Sbjct: 134 LNGMRARRRVLLSGTPIQNDLLEYFSLVHFVNGGILGTAQEFKKRFETPILRGRDADATD 193
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
+ K E+L +L +VNRC+IRRT ALL+KYLPVK EQVVC ++T Q ELY L++S
Sbjct: 194 EDHKKGQEKLLELADVVNRCIIRRTQALLTKYLPVKVEQVVCCRLTQTQSELYKLLVRSK 253
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
++ E T T LS IT LKKLCNHPDL+ +K A G++ +++ P +
Sbjct: 254 GFE--VEQDEKTS---TTLSFITQLKKLCNHPDLIYEKCLQRAPGYDGTLDLFPPNHTTK 308
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
+ ELS K++VLD +LA+IK T DK+VLVSNYTQTLDLFE L R Y YVRLD
Sbjct: 309 I----VRPELSGKVLVLDRLLALIKAQTSDKVVLVSNYTQTLDLFETLCHQRRYLYVRLD 364
Query: 546 GSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
GSMTIKKRAKVVE FN S+ EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM
Sbjct: 365 GSMTIKKRAKVVEQFNNPSSPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 424
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
AR WRDGQKK CF+YR ++TG+IEEK+ QRQ HKKALSSCVVD EEDV RHFS +LR L
Sbjct: 425 ARCWRDGQKKQCFIYRLIATGTIEEKIFQRQTHKKALSSCVVDKEEDVERHFSREQLRDL 484
Query: 665 FQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCW 724
F+L+E+T SDTHD KC RCVN IQV+ PP SD DLS WHH +KR LVD +LK W
Sbjct: 485 FKLKEDTSSDTHDTFKCKRCVNSIQVRGPPEGSDTNSDLSQWHHSADKRGLVDVVLKGAW 544
Query: 725 GAGVSFVFYQHSTKAEKSKV 744
+SF F+ S + ++ V
Sbjct: 545 DETISFTFHHKSHEEQRQTV 564
>gi|328768836|gb|EGF78881.1| hypothetical protein BATDEDRAFT_12619 [Batrachochytrium
dendrobatidis JAM81]
Length = 680
Score = 642 bits (1656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/660 (51%), Positives = 445/660 (67%), Gaps = 41/660 (6%)
Query: 75 FKVPIL-----NYTGGGYSTKALGVRREG--ARKALHDPTAPNALVLYTPPQL--SAHDL 125
++VP L N+ G S LGVRR+ LHDPT P+A++LY P + A L
Sbjct: 1 YQVPTLAKSTKNFGSGVRSGTTLGVRRKTNILSGPLHDPTEPDAVILYEPKVILSEAAKL 60
Query: 126 LKIDKDKI-------QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
+ I +VHVVVDP+L +LRPHQ EGV+F+Y C TG ++ A+GCIMADE
Sbjct: 61 EALKSTAIGGKGPVGEVHVVVDPLLGRVLRPHQIEGVQFLYNCTTGEQVAGAFGCIMADE 120
Query: 179 MGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALP 236
MGLGKTLQCI L+WTLLRQ P+ KP I+KAII PSSLVKNW NE+ KWLG RV
Sbjct: 121 MGLGKTLQCIALLWTLLRQSPIPGKPWIEKAIIACPSSLVKNWANELKKWLGENRVRPYS 180
Query: 237 IDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
D G+K + + F+ GR VNP+L++SYET R + +L K E+GL+LCDEGHRL
Sbjct: 181 CDNKGTKEQTTKDIEQFVAAKGRGVVNPVLIVSYETLRIYTPILVKTEIGLLLCDEGHRL 240
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN +S TY +L LKAKRRV+LSGTPIQNDL EYFSL+ F +LG+ +FRK++E PI
Sbjct: 241 KNGDSLTYTSLNQLKAKRRVILSGTPIQNDLTEYFSLLSFAIPDVLGSEADFRKKFELPI 300
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
LRG+D+ ASD +R + ERL +L+ N+ +IRRT+ LL+KYLPVK E VV K++++Q
Sbjct: 301 LRGRDADASDKDRKTSEERLGELLTTANKFIIRRTAELLTKYLPVKYEYVVFCKLSEMQA 360
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAM 475
+Y + K + + K + G +IT+LKKL NHP L+ D E++
Sbjct: 361 TIYRHFSKQEMNKLAAK-----ERGEKPEKAITTLKKLVNHPILL------NRDDMEDSW 409
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
+P + S+K + E S K+ +L+ ML + + DKIVL+SNYTQTLD E++ +
Sbjct: 410 --IPKEF--SFKECQ--PEYSGKMYLLERMLCQMHAQSSDKIVLISNYTQTLDAIEKMCR 463
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
+R ++ RLDG+MTI+KR K+V+ FN T EFIF+LSSKAGGCG+NLIGANRL++ DPD
Sbjct: 464 VRKWQLCRLDGTMTIQKRQKLVDRFNDPTQPEFIFLLSSKAGGCGINLIGANRLILTDPD 523
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNPAND QA+ARVWRDGQ K CF+YRF++TG+IEEK+ QRQAHK++LSSCVVD E+DV R
Sbjct: 524 WNPANDAQALARVWRDGQTKVCFIYRFIATGTIEEKIFQRQAHKQSLSSCVVDEEQDVER 583
Query: 655 HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP---LESDCT-DDLSCWHHVT 710
HFS+ LR LFQ + T+SDTHD KC RC G Q+ PP + + T D S W+H +
Sbjct: 584 HFSLEALRQLFQYNDQTMSDTHDAFKCKRCRGGKQMIKPPEGVINTGATAADTSTWNHYS 643
>gi|213405783|ref|XP_002173663.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
gi|212001710|gb|EEB07370.1| DNA repair and recombination protein RAD54 [Schizosaccharomyces
japonicus yFS275]
Length = 853
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/594 (55%), Positives = 412/594 (69%), Gaps = 21/594 (3%)
Query: 121 SAHDLLKIDKDKIQ---VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
S DLL I K+K V VV+DP L+ ILRPHQ EGVKF+Y+CVTG + A GCIMAD
Sbjct: 243 SLRDLLGITKEKPPPPPVAVVIDPRLARILRPHQIEGVKFLYKCVTGRIDKVANGCIMAD 302
Query: 178 EMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAAL 235
EMGLGKTLQCI L+WTLL+Q PL KP I+KAII PSSLVKNW NE+ KWLG V
Sbjct: 303 EMGLGKTLQCIALLWTLLKQSPLGGKPTIEKAIITCPSSLVKNWANELVKWLGKDAVTPF 362
Query: 236 PIDGGS-KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
+DG S K E+ L + GR+ P+L++SYET RS+ L EVGL+LCDEGHR
Sbjct: 363 IVDGKSTKQELIEALLQWAHVRGRQITRPVLIVSYETLRSYVEYLKGAEVGLLLCDEGHR 422
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN ES T+ AL L +RRV+LSGTPIQNDL EYFSL++F N G+LG+ Q+FRK YE P
Sbjct: 423 LKNSESLTFTALNSLDVRRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQDFRKNYEIP 482
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
ILRG+D+ S+ ++ + +L +L IVNR +IRRT+ +LSKYLPVK E VV +++ Q
Sbjct: 483 ILRGRDADGSEKDKELGDAKLAELSSIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQ 542
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
LY+ I S +R+ ++G G L +I LKKLCNHPDL+ + FE
Sbjct: 543 TALYSYFITSPEIRKILRGA-----GSQPLKAIGILKKLCNHPDLLHI-----TEDFEGC 592
Query: 475 MNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
+ P G+ G+ + LS K++VL+ ML IK TDDKIVL+SNYT TLDLFE
Sbjct: 593 EKLFPQGFVPKEHRGRDRHVDSSLSGKMLVLERMLYRIKKETDDKIVLISNYTSTLDLFE 652
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVM 590
++ + RGYK +RLDG+M + KR ++V+ FN + F+F+LSSKAGGCG+NLIGANRL++
Sbjct: 653 QVCRTRGYKALRLDGTMNVSKRQRLVDEFNDPEKDAFVFLLSSKAGGCGINLIGANRLIL 712
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD +
Sbjct: 713 FDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQ 772
Query: 651 DVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
DV RHFS+ LR LFQ NT+ DTH+ KC RC NG Q L CT D S
Sbjct: 773 DVERHFSLDNLRQLFQYNPNTVCDTHETYKCRRCKNGRQFISRRLRY-CTGDTS 825
>gi|226293396|gb|EEH48816.1| DNA repair and recombination protein RAD54 [Paracoccidioides
brasiliensis Pb18]
Length = 863
Score = 642 bits (1655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/688 (50%), Positives = 441/688 (64%), Gaps = 61/688 (8%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
QI + F +P++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 153 QIFKQRFSIPLINKNSGAYNPNRPAPILGMRSGTTFIVKPLHDPSGEFAIVLYDPTIDDK 212
Query: 118 ------------------PQLSA-------HDLLKIDKD---KIQVHVVVDPVLSNILRP 149
P+L A D+L I K + ++ VV+DP L+ +LRP
Sbjct: 213 PANRDGGGSGKQAENPDIPKLDAPLVHKSLADILGIKKKVETRPRIPVVIDPRLAKVLRP 272
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKA 208
HQ EGVKF+Y C TG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I K
Sbjct: 273 HQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGKTTIQKC 332
Query: 209 IIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILV 266
+I PS+LVKNW NE+ KWLG V +DG +KAE+ ++L + + GR V P+L+
Sbjct: 333 VIACPSTLVKNWANELVKWLGKDAVTPFVVDGKATKAELTSQLRQWAISSGRAVVRPVLI 392
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+SYET R + + ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL
Sbjct: 393 VSYETLRLNVDEIKDTQIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDL 452
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
EYFSL++F N ILGT EF K++E PILRG+D+ +D +R K +E + +L+ IVN+ +
Sbjct: 453 SEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGTDEDRKKGDETVAELLAIVNKFI 512
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
IRRT+ +LSKYLPVK E VV + Q +LY I+S ++ ++G G L +
Sbjct: 513 IRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQSPDIKSLLRGK-----GSQPLKA 567
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLD 503
I LKKLCNHPDL + GAD P Y G+ + S K+MVLD
Sbjct: 568 IGILKKLCNHPDL----LNLGAD-LPGCEQFFPDDYIPIESRGRDRDVRSWYSGKMMVLD 622
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDGSM + KR K+V+ FN
Sbjct: 623 RMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRQYGCLRLDGSMNVTKRQKLVDKFNDP 682
Query: 564 -SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF+
Sbjct: 683 EGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFI 742
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC
Sbjct: 743 ATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTRSDTHDTFKCK 802
Query: 683 RC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
RC +G Q +K P + D S W+H
Sbjct: 803 RCGPDGTQHIKAPAM---LYGDTSSWNH 827
>gi|67538714|ref|XP_663131.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
gi|40743497|gb|EAA62687.1| hypothetical protein AN5527.2 [Aspergillus nidulans FGSC A4]
Length = 1776
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/681 (50%), Positives = 447/681 (65%), Gaps = 64/681 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP---------P 118
FKVP++N + G Y + LG+R +GA K LHDP+ A+VLY P P
Sbjct: 134 FKVPLINKSTGTYDSSRPAPTLGMR-QGASFVVKPLHDPSGEFAIVLYDPTVDDIDEVKP 192
Query: 119 QLSAHD----LLKIDK------------------DKIQVHVVVDPVLSNILRPHQREGVK 156
+ +D + K+D+ ++ +V VV+DP L+ +LRPHQ V+
Sbjct: 193 EKQDNDASDKIQKLDEPIVHKSLADILGLKKKVENRPKVPVVIDPRLAKVLRPHQ---VQ 249
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y C TG+ +A+GCIMAD MGLGKTLQCI+LMWTLL+Q P A K I K II PSS
Sbjct: 250 FLYRCTTGMIDRNAHGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSS 309
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV NW NE+ KWLG + +DG SK E+ ++L + + GR V P+L++SYET R
Sbjct: 310 LVGNWANELGKWLGKDTITPFAVDGKASKTELTSQLKQWAISSGRSIVRPVLIVSYETLR 369
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L + +GL+LCDEGHRLKN ES T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 370 MYVDTLKDSPIGLLLCDEGHRLKNKESLTWTALNSLNVQRRVILSGTPIQNDLSEYFALL 429
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N +LG+ EFRK++E PIL+G+D+ ++ +R K +ERL +L IVN+ +IRRT+ +
Sbjct: 430 NFANPDLLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSSIVNKFIIRRTNDI 489
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV ++ Q +LY + I S ++ ++G G L +I LKKL
Sbjct: 490 LSKYLPVKYEHVVFCNLSQFQLDLYKHFIDSPEIKSLLRGK-----GSQPLKAIGILKKL 544
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + T G E+A P Y G+ + S K+MVLD MLA I+
Sbjct: 545 CNHPDLL--NLSTDLPGCEHA---FPDDYVPVEARGRDRDVRPWYSGKMMVLDRMLARIR 599
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIF 569
T+DKIVL+SNYTQTLDLFE+L + R Y +RLDG+M +KKR K+V+ FN EF+F
Sbjct: 600 QDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVKKRQKLVDKFNDPDGEEFVF 659
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEE
Sbjct: 660 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEE 719
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGI 688
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 720 KIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCRADGT 779
Query: 689 Q-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 780 QYIKAPAM---LYGDTSSWNH 797
>gi|169600905|ref|XP_001793875.1| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
gi|160705541|gb|EAT90036.2| hypothetical protein SNOG_03305 [Phaeosphaeria nodorum SN15]
Length = 831
Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/686 (50%), Positives = 440/686 (64%), Gaps = 59/686 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTKA----LGVRREGA--RKALHDPTAPNALVLYTP------ 117
+ + F VP+LN G Y+ LG+R + LHDP+ A+VLY P
Sbjct: 101 LFKQRFSVPLLNKDIGAYNANRPAPLLGMRLGTVFVARPLHDPSGEFAIVLYDPTVDDKP 160
Query: 118 -------PQLSAHD---------------LL----KIDKDKIQVHVVVDPVLSNILRPHQ 151
P+LS D +L K+D ++ +V VV+DP LS +LRPHQ
Sbjct: 161 APKEEVEPKLSQQDKKELEAPLVHKSLAEILGLKKKVDDERPRVPVVIDPRLSKVLRPHQ 220
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAII 210
EGVKF+Y TG+ A GCIMADEMGLGKTLQCI LMWTLL+Q P A K I K +I
Sbjct: 221 VEGVKFLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMWTLLKQSPDAGKSTIQKCVI 280
Query: 211 VAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
PSSLV+NW NE+ KWLG V IDG SK E+ ++ + GR V P+L++S
Sbjct: 281 ACPSSLVRNWANELVKWLGPDAVTPFAIDGKASKDELIQQIRQWSIASGRSVVRPVLIVS 340
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
YET R + + ++GL+LCDEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL E
Sbjct: 341 YETLRLYVEEFGQTQIGLMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSE 400
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
YF+L++F N LGT EFRK YE PILRG+D+ +D + K NERL +L+G+VN+ +IR
Sbjct: 401 YFALLNFANPNYLGTRMEFRKHYEIPILRGRDANGTDEDVKKGNERLTELLGLVNKFIIR 460
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
RT+ +LSKYLPVK E VV + QKELY + IKS V+ ++G G L I
Sbjct: 461 RTNDILSKYLPVKYEHVVFCNLAPFQKELYNHFIKSPDVQSLLRGK-----GSQPLKVIG 515
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTM 505
LKKLCNHPDL+ ++ G E+ LP + G+ + + S K++VLD M
Sbjct: 516 MLKKLCNHPDLL--ELPQDLPGCEHT---LPEDFVPKDARGRDREVKVWYSGKMLVLDRM 570
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
LA I+ T+DKIVL+SNYTQTLD+F L + RGY +RLDG+M + KR K+V+ FN
Sbjct: 571 LARIRAETNDKIVLISNYTQTLDIFAALCRSRGYGCLRLDGTMNVSKRQKLVDKFNDPEG 630
Query: 566 -EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++T
Sbjct: 631 PEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITT 690
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
G+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT SDTHD KC RC
Sbjct: 691 GTIEEKVFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRNNTTSDTHDTFKCKRC 750
Query: 685 V--NGIQVKPPPLESDCTDDLSCWHH 708
+G Q+ P + D S W+H
Sbjct: 751 RKEDGRQILKAP--AMLYGDTSTWNH 774
>gi|302883714|ref|XP_003040756.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
gi|256721646|gb|EEU35043.1| DNA repair protein, SNF2 family [Nectria haematococca mpVI 77-13-4]
Length = 805
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/796 (46%), Positives = 481/796 (60%), Gaps = 80/796 (10%)
Query: 1 RRSLAPSQLSK-RSPEDSPGIKTFPP----PVKKEKRSCTSRKPLGSVDNEDEPNS---K 52
RR P L + P PG+ P P +K +R G DN D+P S +
Sbjct: 21 RRMHTPQSLDRLHKPFKCPGVAGRTPATDRPARK-RRKVDYAGADGETDN-DKPYSNQDR 78
Query: 53 LPMTKEEMSEHENLIRQ----ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RK 101
L + ++++ + + K F VP+ N Y+ LG+R +GA K
Sbjct: 79 LALATRDVNKFPVFQAKDKGLVFRKAFSVPLKNKDSTAYNPNRAPPTLGLR-QGAVFIAK 137
Query: 102 ALHDPTAPNALVLYTP---------------PQLSA----------HDLL--------KI 128
LHDP+ ++VLY P P+ A H L K+
Sbjct: 138 PLHDPSGEFSIVLYDPTVDDKPKDTPKAIEAPKADASAEKLDAPLVHKSLAEILGIKKKV 197
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
D + +V VV+DP L+ ILRPHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCI
Sbjct: 198 DGEHPRVPVVIDPKLAKILRPHQVEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCI 257
Query: 189 TLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEI 245
+LMWTLL+Q P A K I KAI+V P+SLVKNW NE+ KWLG + IDG SK E+
Sbjct: 258 SLMWTLLKQSPEAGKSTIQKAIVVCPASLVKNWANELVKWLGANAIHPFAIDGKASKEEL 317
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+L + GR P++++SYET R + L ++GL+ CDEGHRLKN +S T+ A
Sbjct: 318 TRQLRQWAIASGRSVTRPVIIVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNTFNA 377
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L L RRV+L+GTPIQNDL EYFSL F N +LGT QEFRK++E PILRG+D+ AS+
Sbjct: 378 LNSLNVTRRVILTGTPIQNDLTEYFSLTSFANPNLLGTRQEFRKRFEIPILRGRDADASE 437
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
A+R K +E +L+ +VN+ LIRRT+ +LSKYLPVK E VV + Q +LY IKS
Sbjct: 438 ADRKKGDECTGELLSVVNKFLIRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSP 497
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
++ ++G G L +I LKKLCNHPDL+ +D + P +
Sbjct: 498 DIQALLRGK-----GSQPLKAINILKKLCNHPDLL-----NLSDDLPGSEGCCPEDFVPK 547
Query: 486 YKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
G+ + S K+ VLD MLA I+ T+DKIVL+SNYT TLDLFERL + R Y +
Sbjct: 548 ESRGRDREVKSWYSGKMAVLDRMLARIRQDTNDKIVLISNYTSTLDLFERLCRSRQYGCL 607
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDG+M + KR K+V+ FN +EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D
Sbjct: 608 RLDGTMNVNKRQKLVDRFNDPNGDEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQ 667
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ L
Sbjct: 668 QALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSL 727
Query: 662 RSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVD 717
R LFQ NT SDTH+ KC RC +G Q +K P + D S W+H + + + D
Sbjct: 728 RELFQYRPNTKSDTHETFKCRRCKPDGKQYIKAPAM---LYGDTSTWNHFVNEGLKPIQD 784
Query: 718 PILKH-CWGAGVSFVF 732
+L+ C A VS VF
Sbjct: 785 LLLRQECGEAEVSAVF 800
>gi|326484392|gb|EGE08402.1| DNA repair and recombination protein RAD54 [Trichophyton equinum
CBS 127.97]
Length = 820
Score = 640 bits (1652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/710 (49%), Positives = 457/710 (64%), Gaps = 72/710 (10%)
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYST----KALGVRREGAR---KAL 103
++ P+ K + + E RQ F VP+++ + G Y++ LG+R GA K L
Sbjct: 95 NRFPVFK--VKDKETTFRQ----RFHVPLIDKSSGNYNSGRAAPTLGMRC-GATFVVKPL 147
Query: 104 HDPTAPNALVLYTPP---------------------------------QLSAHDLLKIDK 130
HDP+ A+VLY P S ++L I K
Sbjct: 148 HDPSGEFAIVLYDPTIDDKPDDNDESKDTAGNKDGEEVEQKKLNQPLVHKSLAEILGIKK 207
Query: 131 D---KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
+ + +V VV+DP L+ ILRPHQ EGVKF+Y C TG+ ++A+GCIMAD MGLGKTLQC
Sbjct: 208 NVDERPKVPVVIDPRLAKILRPHQIEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQC 267
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAE 244
ITLMWTLL+Q P A KP + KA+I P++LV NW NE+ KWLG + IDG SK E
Sbjct: 268 ITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTE 327
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+ ++L + GR V P+L++SYET R ++ L ++GL+LCDEGHRLKN +SQTY
Sbjct: 328 LISQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYV 387
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL L ++RV+LSGTPIQNDL EYFSL+ F N GILG+ EF K YE PILRG+D+ +
Sbjct: 388 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 447
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
D ++ K NERL +L+ +VN+ +IRR++ LLSKYLPVK E VV + Q +LY + I+S
Sbjct: 448 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 507
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
++ ++G G L +I LKKLCNHPDL+ K+ G E P
Sbjct: 508 PEIKSLLRGK-----GSQPLKAIGILKKLCNHPDLL--KLSEDLPGCE---QYFPEDMMV 557
Query: 485 SY-KSGKLLIE--LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
S + G ++ S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y
Sbjct: 558 SNGRRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGC 617
Query: 542 VRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
+RLDG+M +KKR+K+V+ FN EF+F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D
Sbjct: 618 IRLDGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAAD 677
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QA+ARVWRDGQ K CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+
Sbjct: 678 QQALARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDS 737
Query: 661 LRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 738 LRELFQFKPGTTSDTHDTFKCKRCRPDGTQHIKAPAM---LYGDTSSWNH 784
>gi|317143637|ref|XP_001819595.2| DNA repair protein rhp54 [Aspergillus oryzae RIB40]
Length = 827
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/764 (47%), Positives = 474/764 (62%), Gaps = 82/764 (10%)
Query: 8 QLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPL--GSVDNEDEPNSKLPMTKEE--MSEH 63
+LSK P PG T P + + R+ + D + NS+ P T EE
Sbjct: 47 RLSK--PFKCPGSAT---PTRTSDKPARKRRKVNYAGADETVDDNSEKPYTNEERLALAT 101
Query: 64 ENLIRQILAKP----------FKVPILNYT----GGGYSTKALGVRREGAR---KALHDP 106
++ R + KP FK+P++N G + LG+R +GA K LHDP
Sbjct: 102 RDVNRFPVFKPKDKETTFKQRFKIPLINKAVDSYNGARAAPTLGMR-QGATFVVKPLHDP 160
Query: 107 TAPNALVLYTP-----------------------PQLSA-------HDLLKIDKDKIQ-- 134
+ A+VLY P P+L A D+L + K K++
Sbjct: 161 SGEFAIVLYDPTVDDADENSETKLPEDGKPEEQQPKLDAPLVHKSLADILGLKK-KVETG 219
Query: 135 --VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A+GCIMAD MGLGKTLQCI+LMW
Sbjct: 220 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 279
Query: 193 TLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKL 249
TLL+Q P A K LI K II PSSLV NW NE+ KWLG + +DG SK E+ +++
Sbjct: 280 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 339
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+ GR V P+L++SYET R + L + +GL+LCDEGHRLKN +S T+ AL L
Sbjct: 340 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 399
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RRV+LSGTPIQNDL EYF+L++F N +LG+ EFRK++E PILRG+D+ SD ++
Sbjct: 400 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 459
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K +E L +L IVN+ +IRRT+ +L+KYLPVK E VV ++ Q +LY + I+S +R
Sbjct: 460 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 519
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
++G G L +I LKKLCNHPDL+ + T G E A P Y G
Sbjct: 520 LLRGK-----GSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCEFA---FPEDYVPPEARG 569
Query: 490 K---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG
Sbjct: 570 RDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDG 629
Query: 547 SMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+M + KR K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+A
Sbjct: 630 TMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALA 689
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LF
Sbjct: 690 RVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELF 749
Query: 666 QLEENTISDTHDKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHH 708
Q + T SDTHD KC RC +G Q ++ D S W+H
Sbjct: 750 QFKPETRSDTHDTFKCKRCRPDGAQFIKA--QAMLYGDTSTWNH 791
>gi|350630130|gb|EHA18503.1| hypothetical protein ASPNIDRAFT_128714 [Aspergillus niger ATCC
1015]
Length = 1740
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/682 (50%), Positives = 442/682 (64%), Gaps = 64/682 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
FK+P++N + Y++ LG+R +GA K LHDP+ A+VLY P
Sbjct: 85 FKIPLINKSSDAYNSSRPAPTLGMR-QGATFVVKPLHDPSGEFAIVLYDPTVDDVNEPEV 143
Query: 118 ------------PQL-------SAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGV 155
P+L S D+L + K + +V VV+DP L+ +LRPHQ EG
Sbjct: 144 KEGATADTEEQKPKLDEPLVHKSLADILGLKKKTEGRPKVPVVIDPRLAKVLRPHQVEG- 202
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVAPS 214
F+Y C TG+ ++A GCIMAD MGLGKTLQCI+LMWTLL+Q P A I K II PS
Sbjct: 203 -FLYRCTTGMVDKNANGCIMADGMGLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPS 261
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
SLV NW NE+ KWLG + +DG SK E+ +++ + GR V P+L+ISYET
Sbjct: 262 SLVGNWANELVKWLGKDAITPFAVDGKASKTELISQMKQWAIASGRAIVRPVLIISYETL 321
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ES T+ AL GL +RRV+LSGTPIQNDL EYF+L
Sbjct: 322 RLYVDTLRDSPIGLLLCDEGHRLKNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFAL 381
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
+HF N +LG+ EFRK++E PILRG+D+ ++ + K +ERL +L GIVN+ +IRRT+
Sbjct: 382 LHFANPNLLGSQNEFRKRFELPILRGRDAAGTEEDLKKGDERLAELSGIVNKFIIRRTND 441
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV M+ Q LY + I+S ++ ++G G L +I LKK
Sbjct: 442 ILSKYLPVKYEHVVFCNMSAFQLGLYKHFIQSPEIKSLLRGK-----GSQPLKAIGLLKK 496
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL+ + G E P Y G+ + S K+MVLD MLA I
Sbjct: 497 LCNHPDLL--NLSNDLPGCEYT---FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARI 551
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+ KR K+V+ FN EF+
Sbjct: 552 RQDTNDKIVLISNYTQTLDLFEKLCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFV 611
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 612 FLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 671
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC G
Sbjct: 672 EKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPEG 731
Query: 688 IQ-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 732 TQYIKAPAM---LYGDTSTWNH 750
>gi|83767454|dbj|BAE57593.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 815
Score = 640 bits (1650), Expect = e-180, Method: Compositional matrix adjust.
Identities = 364/764 (47%), Positives = 474/764 (62%), Gaps = 82/764 (10%)
Query: 8 QLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPL--GSVDNEDEPNSKLPMTKEE--MSEH 63
+LSK P PG T P + + R+ + D + NS+ P T EE
Sbjct: 35 RLSK--PFKCPGSAT---PTRTSDKPARKRRKVNYAGADETVDDNSEKPYTNEERLALAT 89
Query: 64 ENLIRQILAKP----------FKVPILNYT----GGGYSTKALGVRREGAR---KALHDP 106
++ R + KP FK+P++N G + LG+R +GA K LHDP
Sbjct: 90 RDVNRFPVFKPKDKETTFKQRFKIPLINKAVDSYNGARAAPTLGMR-QGATFVVKPLHDP 148
Query: 107 TAPNALVLYTP-----------------------PQLSA-------HDLLKIDKDKIQ-- 134
+ A+VLY P P+L A D+L + K K++
Sbjct: 149 SGEFAIVLYDPTVDDADENSETKLPEDGKPEEQQPKLDAPLVHKSLADILGLKK-KVETG 207
Query: 135 --VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A+GCIMAD MGLGKTLQCI+LMW
Sbjct: 208 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 267
Query: 193 TLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKL 249
TLL+Q P A K LI K II PSSLV NW NE+ KWLG + +DG SK E+ +++
Sbjct: 268 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 327
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+ GR V P+L++SYET R + L + +GL+LCDEGHRLKN +S T+ AL L
Sbjct: 328 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 387
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RRV+LSGTPIQNDL EYF+L++F N +LG+ EFRK++E PILRG+D+ SD ++
Sbjct: 388 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 447
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K +E L +L IVN+ +IRRT+ +L+KYLPVK E VV ++ Q +LY + I+S +R
Sbjct: 448 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 507
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
++G G L +I LKKLCNHPDL+ + T G E A P Y G
Sbjct: 508 LLRGK-----GSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCEFA---FPEDYVPPEARG 557
Query: 490 K---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG
Sbjct: 558 RDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDG 617
Query: 547 SMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+M + KR K+V+ FN E F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+A
Sbjct: 618 TMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALA 677
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LF
Sbjct: 678 RVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELF 737
Query: 666 QLEENTISDTHDKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHH 708
Q + T SDTHD KC RC +G Q ++ D S W+H
Sbjct: 738 QFKPETRSDTHDTFKCKRCRPDGAQFI--KAQAMLYGDTSTWNH 779
>gi|189091948|ref|XP_001929807.1| hypothetical protein [Podospora anserina S mat+]
gi|27803083|emb|CAD60786.1| unnamed protein product [Podospora anserina]
gi|188219327|emb|CAP49307.1| unnamed protein product [Podospora anserina S mat+]
Length = 800
Score = 640 bits (1650), Expect = e-180, Method: Compositional matrix adjust.
Identities = 357/711 (50%), Positives = 450/711 (63%), Gaps = 62/711 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTPP---- 118
+ K F VP+LN Y+ LG+R +GA K LHDP+ A+VLY P
Sbjct: 99 VFRKAFSVPLLNKDSAAYNPNRPPPTLGLR-QGAVFVAKPLHDPSGEFAIVLYDPTVDDK 157
Query: 119 ---------------------QLSAHDLLKIDKDKIQVH----VVVDPVLSNILRPHQRE 153
S ++L I K + H VV+DP L+ ILRPHQ E
Sbjct: 158 PKDAPKPEEKVEEEKIVEPLEHKSLAEILGIKKKVVGEHPRVPVVIDPKLAKILRPHQIE 217
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVA 212
GVKFMY+CVTG+ E A+GCIMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+
Sbjct: 218 GVKFMYKCVTGMVDEKAHGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKTTIQKAIVAC 277
Query: 213 PSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYE 270
P+SLV+NW NE+ KWLG IDG SK E+ +L + GR PI+++SYE
Sbjct: 278 PASLVRNWANELVKWLGPDATTPFAIDGKASKEELTRQLRQWAIATGRAVTRPIIIVSYE 337
Query: 271 TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
T R + L E+GL+LCDEGHRLKN +++ + AL GL KRRV+LSGTPIQNDL EYF
Sbjct: 338 TLRLNCEELRNTEIGLILCDEGHRLKNNDNKLFTALNGLNVKRRVILSGTPIQNDLSEYF 397
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT 390
SL+ F N +LGT EFRK++E PILRG+DS AS+AER + +E L +L IVN+ +IRRT
Sbjct: 398 SLISFANPDLLGTHLEFRKRFEIPILRGRDSMASEAERKRGDECLAELATIVNKFVIRRT 457
Query: 391 SALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSL 450
+ LLSKYLP+K E VV + Q +LY + S ++ ++G G L +I L
Sbjct: 458 NDLLSKYLPIKYEHVVFCNLAPFQLDLYNYFLTSPDIQALLRGK-----GSQPLKAIGIL 512
Query: 451 KKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLA 507
K LCNHPDL+ K+ G E P Y G+ + S K+ VLD MLA
Sbjct: 513 KNLCNHPDLL--KLPDDLPGSEQHY---PDDYVPRDSRGRDRDIKPWYSGKMQVLDRMLA 567
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNE 566
I+ T+DKIVL+SNYTQTLDLFE+L + R Y +RLDG M + KR K+V+ FN +E
Sbjct: 568 RIRADTNDKIVLISNYTQTLDLFEKLCRSRAYPCLRLDGKMLVNKRQKLVDKFNDPNGDE 627
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+
Sbjct: 628 FVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGT 687
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-V 685
IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTHD KC RC
Sbjct: 688 IEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTKSDTHDTFKCKRCKP 747
Query: 686 NGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWGA-GVSFVF 732
+G Q +K P + D S W+H + + + D +L+ G VS VF
Sbjct: 748 DGKQFIKAPAM---LYGDTSTWNHFVNEGLKGIQDLLLRQEMGEREVSAVF 795
>gi|429851172|gb|ELA26385.1| DNA repair and recombination protein rad54 [Colletotrichum
gloeosporioides Nara gc5]
Length = 806
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 349/712 (49%), Positives = 451/712 (63%), Gaps = 62/712 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTP-----P 118
I K F +P++N ++ LG+R K LHDP+ ++VLY P P
Sbjct: 103 IFRKAFSIPLINKNSAAFNPNRPPPTLGLRTGAVFVAKPLHDPSGEFSIVLYDPTVDDKP 162
Query: 119 QL----------------------SAHDLL----KIDKDKIQVHVVVDPVLSNILRPHQR 152
++ S ++L K++ + +V VV+DP L+ +LRPHQ
Sbjct: 163 KVPEKKEEQREPEPEKIDAPLVHKSLSEILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQI 222
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+
Sbjct: 223 EGVKFMYRCVTGMIEEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVA 282
Query: 212 APSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
PSSLV+NW NE+ KWLG + IDG SK E+ +L + GR P++++SY
Sbjct: 283 CPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSY 342
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL EY
Sbjct: 343 ETLRLNVEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNLNVTRRVILSGTPIQNDLSEY 402
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
F+L+ F N +LG+ EFRK++E PILRG+D+ AS+A+R K +E L +L+GIVN+ +IRR
Sbjct: 403 FALISFANPDLLGSRLEFRKRFELPILRGRDADASEADRKKGDECLSELLGIVNKFIIRR 462
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ +LSKYLPVK E VV + Q +LY I S +++ ++G G L +I
Sbjct: 463 TNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPSIQALLRGK-----GSQPLKAINI 517
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTML 506
LKKLCNHPDL+ D + N P Y G+ + S K+ VLD ML
Sbjct: 518 LKKLCNHPDLL-----NLGDDLPGSENCYPEDYVPKEARGRDRDIKPWYSGKMQVLDRML 572
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE 566
A I+ T+DKIVL+SNYT TLDLFE+L + R Y +RLDG+M + KR K+V+ FN E
Sbjct: 573 ARIRQDTNDKIVLISNYTSTLDLFEKLCRSRAYGCLRLDGTMNVNKRQKLVDKFNNPEGE 632
Query: 567 -FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG
Sbjct: 633 EFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 692
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC- 684
+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ T SDTHD KC RC
Sbjct: 693 TIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPGTNSDTHDTFKCKRCK 752
Query: 685 VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
+G Q +K P + D S W+H + + + D +L+ C VS VF
Sbjct: 753 PDGRQYIKSPAM---LYGDTSTWNHFVNEGLKPIQDLLLRQECGEPEVSAVF 801
>gi|391867384|gb|EIT76630.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 811
Score = 639 bits (1649), Expect = e-180, Method: Compositional matrix adjust.
Identities = 364/764 (47%), Positives = 474/764 (62%), Gaps = 82/764 (10%)
Query: 8 QLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPL--GSVDNEDEPNSKLPMTKEE--MSEH 63
+LSK P PG T P + + R+ + D + NS+ P T EE
Sbjct: 31 RLSK--PFKCPGSAT---PTRTSDKPARKRRKVNYAGADETVDDNSEKPYTNEERLALAT 85
Query: 64 ENLIRQILAKP----------FKVPILNYT----GGGYSTKALGVRREGAR---KALHDP 106
++ R + KP FK+P++N G + LG+R +GA K LHDP
Sbjct: 86 RDVNRFPVFKPKDKETTFKQRFKIPLINKAVDSYNGARAAPTLGMR-QGATFVVKPLHDP 144
Query: 107 TAPNALVLYTP-----------------------PQLSA-------HDLLKIDKDKIQ-- 134
+ A+VLY P P+L A D+L + K K++
Sbjct: 145 SGEFAIVLYDPTVDDADENSETKLPEDGKPEEQQPKLDAPLVHKSLADILGLKK-KVETG 203
Query: 135 --VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A+GCIMAD MGLGKTLQCI+LMW
Sbjct: 204 PRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADGMGLGKTLQCISLMW 263
Query: 193 TLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKL 249
TLL+Q P A K LI K II PSSLV NW NE+ KWLG + +DG SK E+ +++
Sbjct: 264 TLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFAVDGKASKTELTSQI 323
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+ GR V P+L++SYET R + L + +GL+LCDEGHRLKN +S T+ AL L
Sbjct: 324 KQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRLKNKDSLTWTALNSL 383
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RRV+LSGTPIQNDL EYF+L++F N +LG+ EFRK++E PILRG+D+ SD ++
Sbjct: 384 NVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPILRGRDAAGSDEDKK 443
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K +E L +L IVN+ +IRRT+ +L+KYLPVK E VV ++ Q +LY + I+S +R
Sbjct: 444 KGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQLDLYNHFIQSPEIRS 503
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
++G G L +I LKKLCNHPDL+ + T G E A P Y G
Sbjct: 504 LLRGK-----GSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCEFA---FPEDYVPPEARG 553
Query: 490 K---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG
Sbjct: 554 RDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDG 613
Query: 547 SMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+M + KR K+V+ FN E F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+A
Sbjct: 614 TMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALA 673
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LF
Sbjct: 674 RVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLESLRELF 733
Query: 666 QLEENTISDTHDKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHH 708
Q + T SDTHD KC RC +G Q ++ D S W+H
Sbjct: 734 QFKPETRSDTHDTFKCKRCRPDGAQFI--KAQAMLYGDTSTWNH 775
>gi|296814920|ref|XP_002847797.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
gi|238840822|gb|EEQ30484.1| DNA repair and recombination protein RAD54 [Arthroderma otae CBS
113480]
Length = 819
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 342/685 (49%), Positives = 447/685 (65%), Gaps = 64/685 (9%)
Query: 75 FKVPILNYTGGGYST----KALGVRREGAR--KALHDPTAPNALVLYTPP---------- 118
F +P+++ + G Y + LG+R + K LHDP+ A+VLY P
Sbjct: 112 FHIPLIDKSSGNYGSGRAAPTLGMRCGASFVVKPLHDPSGEFAIVLYDPTIDDKPDTKEE 171
Query: 119 -----------------------QLSAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQR 152
S ++L I K ++ +V VV+DP L+ ILRPHQ
Sbjct: 172 PKEVPRDKDDEEIGKNTLDQPLVHKSLAEILGIKKKVDERPKVPVVIDPRLAKILRPHQI 231
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKF+Y C TG+ ++A GCIMAD MGLGKTLQCITLMWTLL+Q P A K + KA+I
Sbjct: 232 EGVKFLYRCTTGLVDKNASGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKSTVQKAVIA 291
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
P++LV NW NE+ KWLG + IDG SK E+ ++L + GR V P+L++SY
Sbjct: 292 CPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLRQWAIASGRSVVRPVLIVSY 351
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R ++ L ++GL+LCDEGHRLKN +SQTY AL L ++RV+LSGTPIQNDL EY
Sbjct: 352 ETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTPIQNDLSEY 411
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
FSL+ F N GILG+ EF K YE PILRG+D+ ++ ++ K NERL +L+ +VN+ +IRR
Sbjct: 412 FSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTEEQQKKGNERLAELLNLVNKFIIRR 471
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LLSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I
Sbjct: 472 SNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGK-----GSQPLKAIGI 526
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY-KSGKLLIE--LSAKLMVLDTML 506
LKKLCNHPDL+ K+ G E P A+S + G ++ S K+MVLD ML
Sbjct: 527 LKKLCNHPDLL--KLSEDLPGCE---KYFPEDMASSNGRRGDREVKSWYSGKMMVLDRML 581
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSN 565
A I+ T+DKIVL+SNYTQTLDLFERL + RGY +RLDG+M +KKR+K+V+ FN
Sbjct: 582 ARIRQDTNDKIVLISNYTQTLDLFERLCRSRGYGCIRLDGTMGVKKRSKLVDRFNDPNGE 641
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
EF+F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQ K CFVYRF++TG
Sbjct: 642 EFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATG 701
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC- 684
+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + +T SDTHD KC RC
Sbjct: 702 TIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTTSDTHDTFKCKRCR 761
Query: 685 VNGIQ-VKPPPLESDCTDDLSCWHH 708
+G Q +K P + D S W+H
Sbjct: 762 PDGTQHIKAPAM---LYGDTSSWNH 783
>gi|452004580|gb|EMD97036.1| hypothetical protein COCHEDRAFT_118646 [Cochliobolus heterostrophus
C5]
Length = 785
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 346/681 (50%), Positives = 438/681 (64%), Gaps = 59/681 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGA--RKALHDPTAPNALVLYTP----------- 117
F VP++N G Y+ LG+R + LHDP+ A+VLY P
Sbjct: 79 FIVPLVNKDTGAYNPNRPAPLLGMRTGTVFVARPLHDPSGEFAIVLYDPTVDDKTEPKQE 138
Query: 118 --PQLS-----------AHDLL--------KIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
P+ S H L K+D ++ +V VV+DP L+ +LRPHQ EGVK
Sbjct: 139 PEPKESQTEKKELDAPLVHKSLAEILGLKKKVDNERPRVPVVIDPRLAKVLRPHQVEGVK 198
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y TG+ A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K +I PSS
Sbjct: 199 FLYRATTGMIDPKANGCIMADEMGLGKTLQCITLMWTLLKQSPEAGKSTIQKCVIACPSS 258
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV+NW NE+ KWLG V IDG SK E+ ++ + GR V P+L++SYET R
Sbjct: 259 LVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLR 318
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ + +GL+LCDEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 319 LYVDEFGQTPIGLMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALL 378
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N G LGT EFRKQ+E PIL+G+D+ +DA+ K NERL +L+G+VN+ +IRRT+ +
Sbjct: 379 NFANPGYLGTRMEFRKQFEIPILKGRDANGTDADIQKGNERLTELLGLVNKFIIRRTNDI 438
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV + QK+LY + IKS V+ ++G G L I LKKL
Sbjct: 439 LSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGK-----GSQPLKVIGMLKKL 493
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + G E+ LP + G+ + + S K+ VLD MLA I+
Sbjct: 494 CNHPDLL--NLPEDLPGCEDK---LPEDFVQKDARGRDREVKVWYSGKMAVLDRMLARIR 548
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIF 569
T+DKIVL+SNYTQTLD+F L + RGY RLDG+M + KR K+V+ FN S EF+F
Sbjct: 549 AETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVF 608
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEE
Sbjct: 609 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEE 668
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV--NG 687
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +NT SDTHD KC RC +G
Sbjct: 669 KVFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRDNTTSDTHDTFKCKRCRKEDG 728
Query: 688 IQVKPPPLESDCTDDLSCWHH 708
Q+ P + D S W+H
Sbjct: 729 KQIIKAP--AMLYGDTSTWNH 747
>gi|449299733|gb|EMC95746.1| hypothetical protein BAUCODRAFT_501788 [Baudoinia compniacensis
UAMH 10762]
Length = 813
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 341/689 (49%), Positives = 435/689 (63%), Gaps = 64/689 (9%)
Query: 75 FKVPILNYTGGGYST----KALGVRREGA---RKALHDPTAPNALVLYTP-----PQLSA 122
F VP+L Y+ LG+R +GA K LHDP A+VL+ P P++ A
Sbjct: 106 FSVPLLKKDATSYNAVRPPPLLGLR-QGAVFVAKPLHDPAGEFAIVLFDPTVDGKPEIKA 164
Query: 123 HD----------------------------LLKI----DKDKIQVHVVVDPVLSNILRPH 150
D +L I D ++ +V VV+DP ++ +LRPH
Sbjct: 165 ADEALKESAKGSQDDGSKTYDSLMHRSLADILGIKKKDDSERPKVPVVIDPRIAKVLRPH 224
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAI 209
Q EGVKF+Y C TG+ ++A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K +
Sbjct: 225 QVEGVKFLYRCTTGLIDDNAQGCIMADEMGLGKTLQCITLMWTLLKQSPDAGKGTIQKCV 284
Query: 210 IVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVI 267
I PSSLV+NW NE+ KWLG + +DG SK E+ ++ + GR + P+L++
Sbjct: 285 IACPSSLVRNWANELVKWLGQDAINPFAVDGKASKEELTMQMRQWAAATGRAVIRPVLIV 344
Query: 268 SYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLL 327
SYET R + L +GL+LCDEGHRLKN ESQT++AL L K+RV+LSGTPIQNDL
Sbjct: 345 SYETLRLYVQELGNTPIGLMLCDEGHRLKNGESQTFEALNALNVKKRVILSGTPIQNDLS 404
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
EYF+L++F N G LGT Q+FRKQYE PILRG+D+ ASD + + NERL +L+ VN+ +I
Sbjct: 405 EYFALLNFANPGYLGTRQDFRKQYEIPILRGRDAGASDHDMQRGNERLSELLVKVNKFII 464
Query: 388 RRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSI 447
RRT+ +LSKYLPVK E VV + Q +LY +KS ++ ++G G L +I
Sbjct: 465 RRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVKSPEIQSLLRGK-----GSQPLKAI 519
Query: 448 TSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDT 504
LKKLCNHPDL+ D + P Y G+ + S K+ VLD
Sbjct: 520 GLLKKLCNHPDLL-----NLPDDLPGCDELFPKEYETKDNRGRNREVNPSYSGKMQVLDR 574
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-T 563
ML I+ T DKIVL+SNYTQTLD+FERL + Y +RLDG+M + KR K+V+ FN
Sbjct: 575 MLRSIRHETTDKIVLISNYTQTLDVFERLCRSNSYGCLRLDGTMNVSKRQKLVDKFNDPE 634
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF++
Sbjct: 635 GKEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKDCFVYRFIA 694
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ+HK++LSSCVVD EDV RHF++ LR LFQ T SDTHD KC R
Sbjct: 695 TGTIEEKVFQRQSHKQSLSSCVVDSAEDVERHFTLDSLRELFQYRPGTTSDTHDTFKCKR 754
Query: 684 CVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
C G QV P + D S W+H +
Sbjct: 755 CKEGKQVIKAP--AMLYGDTSTWNHFVNE 781
>gi|259485020|tpe|CBF81736.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 833
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 343/681 (50%), Positives = 447/681 (65%), Gaps = 64/681 (9%)
Query: 75 FKVPILNYTGGGYSTK----ALGVRREGAR---KALHDPTAPNALVLYTP---------P 118
FKVP++N + G Y + LG+R +GA K LHDP+ A+VLY P P
Sbjct: 134 FKVPLINKSTGTYDSSRPAPTLGMR-QGASFVVKPLHDPSGEFAIVLYDPTVDDIDEVKP 192
Query: 119 QLSAHD----LLKIDK------------------DKIQVHVVVDPVLSNILRPHQREGVK 156
+ +D + K+D+ ++ +V VV+DP L+ +LRPHQ V+
Sbjct: 193 EKQDNDASDKIQKLDEPIVHKSLADILGLKKKVENRPKVPVVIDPRLAKVLRPHQ---VQ 249
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y C TG+ +A+GCIMAD MGLGKTLQCI+LMWTLL+Q P A K I K II PSS
Sbjct: 250 FLYRCTTGMIDRNAHGCIMADGMGLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSS 309
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV NW NE+ KWLG + +DG SK E+ ++L + + GR V P+L++SYET R
Sbjct: 310 LVGNWANELGKWLGKDTITPFAVDGKASKTELTSQLKQWAISSGRSIVRPVLIVSYETLR 369
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L + +GL+LCDEGHRLKN ES T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 370 MYVDTLKDSPIGLLLCDEGHRLKNKESLTWTALNSLNVQRRVILSGTPIQNDLSEYFALL 429
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N +LG+ EFRK++E PIL+G+D+ ++ +R K +ERL +L IVN+ +IRRT+ +
Sbjct: 430 NFANPDLLGSQNEFRKRFEIPILKGRDAAGTEEDRKKGDERLAELSSIVNKFIIRRTNDI 489
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV ++ Q +LY + I S ++ ++G G L +I LKKL
Sbjct: 490 LSKYLPVKYEHVVFCNLSQFQLDLYKHFIDSPEIKSLLRGK-----GSQPLKAIGILKKL 544
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + T G E+A P Y G+ + S K+MVLD MLA I+
Sbjct: 545 CNHPDLL--NLSTDLPGCEHA---FPDDYVPVEARGRDRDVRPWYSGKMMVLDRMLARIR 599
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIF 569
T+DKIVL+SNYTQTLDLFE+L + R Y +RLDG+M +KKR K+V+ FN EF+F
Sbjct: 600 QDTNDKIVLISNYTQTLDLFEKLCRSRAYGCLRLDGTMNVKKRQKLVDKFNDPDGEEFVF 659
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEE
Sbjct: 660 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEE 719
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGI 688
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 720 KIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCRADGT 779
Query: 689 Q-VKPPPLESDCTDDLSCWHH 708
Q +K P + D S W+H
Sbjct: 780 QYIKAPAM---LYGDTSSWNH 797
>gi|342885327|gb|EGU85368.1| hypothetical protein FOXB_04079 [Fusarium oxysporum Fo5176]
Length = 805
Score = 637 bits (1644), Expect = e-180, Method: Compositional matrix adjust.
Identities = 353/715 (49%), Positives = 449/715 (62%), Gaps = 66/715 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTPP---- 118
+ K F VP+ N Y+ LG+R +GA K LHDP+ A+VL+ P
Sbjct: 100 VFRKAFSVPLKNKDSAAYNPNRAPPTLGLR-QGAVFIAKPLHDPSGEFAIVLHDPTVDDK 158
Query: 119 ------------------QLSA---HDLL--------KIDKDKIQVHVVVDPVLSNILRP 149
+L A H L K+D + +V VV+DP L+ ILRP
Sbjct: 159 PRDVPKAIEPAKTETADGKLDAPLVHKSLAEILGIKKKVDGEHPRVPVVIDPKLAKILRP 218
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKA 208
HQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCI+LMWTLL+Q P A KP I KA
Sbjct: 219 HQVEGVKFMYRCVTGLIDEKANGCIMADEMGLGKTLQCISLMWTLLKQSPDAGKPTIQKA 278
Query: 209 IIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILV 266
I+V P+SLVKNW NE+ KWLG + IDG SK E+ +L + GR P+++
Sbjct: 279 IVVCPASLVKNWANELVKWLGPNAINPFAIDGKASKEELTRQLRQWAIASGRAVTRPVII 338
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+SYET R + L ++GL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQNDL
Sbjct: 339 VSYETLRLNVEELKHTKIGLLFCDEGHRLKNSDSNTFNALNSLNVSRRVILTGTPIQNDL 398
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
EYFSL F N +LGT EFRK+YE PILRG+D+ AS+ +R K +E L+ +VN+ L
Sbjct: 399 TEYFSLTSFANPDLLGTRLEFRKRYEIPILRGRDADASEEDRKKGDECTAALLNVVNKFL 458
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
IRRT+ +LSKYLPVK E VV + Q +LY IKS ++ ++G G L +
Sbjct: 459 IRRTNDILSKYLPVKYEHVVFCNLAPFQFDLYNYFIKSPDIQALLRGK-----GSQPLKA 513
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLD 503
I LKKLCNHPDL+ AD + P Y G+ + S K+ VLD
Sbjct: 514 INILKKLCNHPDLL-----NMADDLPGSEQCFPDDYVPKESRGRDREIKSWYSGKMAVLD 568
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
MLA I+ T+DKIVL+SNYT TLDLFER+ + R Y +RLDG+M + KR K+V+ FN
Sbjct: 569 RMLARIRQDTNDKIVLISNYTSTLDLFERMCRSRQYGCLRLDGTMNVNKRQKLVDRFNDP 628
Query: 564 -SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
+EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF+
Sbjct: 629 EGDEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFI 688
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTH+ KC
Sbjct: 689 ATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTKSDTHETFKCK 748
Query: 683 RC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKH-CWGAGVSFVF 732
RC +G Q +K P + D S W+H + + + D +L+ C + VS VF
Sbjct: 749 RCKPDGKQYIKAPAM---LYGDTSTWNHFVNEGLKPIQDLLLRQECGESEVSAVF 800
>gi|367047285|ref|XP_003654022.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
gi|347001285|gb|AEO67686.1| hypothetical protein THITE_2116567 [Thielavia terrestris NRRL 8126]
Length = 807
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 359/718 (50%), Positives = 450/718 (62%), Gaps = 68/718 (9%)
Query: 69 QILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP---- 117
++ K F VP LN Y+ LG+R +GA K LHDP A+VLY P
Sbjct: 99 KVFRKAFTVPFLNKDHAAYNPNRPPPTLGLR-QGAIFIPKPLHDPCGEFAIVLYDPTIDD 157
Query: 118 -------------------------PQL--SAHDLLKIDKDKIQVH----VVVDPVLSNI 146
P + S ++L I K + H VV+DP L+ +
Sbjct: 158 KPKEAPKSEEKEAAAAAEPPSKLDAPLMHKSLAEILGIKKKVVGEHPRVPVVIDPKLAKV 217
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLI 205
LRPHQ EGVKFMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I
Sbjct: 218 LRPHQIEGVKFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKTTI 277
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNP 263
KAI+ PSSLV+NW NE+TKWLG + IDG SK E+ +L + GR P
Sbjct: 278 QKAIVACPSSLVRNWANELTKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRAITRP 337
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
++++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQ
Sbjct: 338 VIIVSYETLRLNVEELKNTPIGLMLCDEGHRLKNGDSQTFNALNSLNVSRRVILSGTPIQ 397
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
NDL EYFSL+ F N +LG+ EFRK++E PILRG+D+ AS+AER + +E L +L+ IVN
Sbjct: 398 NDLSEYFSLISFANPDLLGSRLEFRKRFELPILRGRDADASEAERKRGDECLAELLAIVN 457
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
+ +IRRT+ +LSKYLPVK E VV + Q+ LY I S ++ ++G G
Sbjct: 458 KFIIRRTNDILSKYLPVKYEHVVFCNLAPFQQALYNYFITSPDIQALLRGK-----GSQP 512
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLM 500
L +I LKKLCNHPDL + AD P Y G+ + S K+
Sbjct: 513 LKAIGILKKLCNHPDL----LDLAAD-LPGCEQYWPDDYVPKEARGRDRDIKPWYSGKMQ 567
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
VLD MLA I+ T+DKIVL+SNYTQTLDLFERL + RGY +RLDG+M + KR K+V+ F
Sbjct: 568 VLDRMLARIRADTNDKIVLISNYTQTLDLFERLCRSRGYGCLRLDGTMNVNKRQKLVDKF 627
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N +EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVY
Sbjct: 628 NDPDGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVY 687
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKI 679
RF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTHD
Sbjct: 688 RFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTRSDTHDTF 747
Query: 680 KCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWGAG-VSFVF 732
KC RC +G Q +K ++ D S W+H + + D +LK G VS VF
Sbjct: 748 KCKRCRPDGRQHIK---AQAMLYGDTSTWNHFVNDGLKTIQDHLLKQESGEQEVSAVF 802
>gi|452690|emb|CAA82750.1| DNA repair protein [Schizosaccharomyces pombe]
Length = 852
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/604 (53%), Positives = 419/604 (69%), Gaps = 24/604 (3%)
Query: 118 PQLSAHDLLKIDKDKIQ---VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCI 174
P S DLL I K+K V VV+DP L+ ILRPHQ EGVKF+Y+CVTG A GCI
Sbjct: 232 PNKSLKDLLGIQKEKPPPPPVAVVIDPKLTRILRPHQIEGVKFLYKCVTGRIDRCANGCI 291
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRV 232
MADEMGLGKTLQCI L+WTLL+Q P A KP I+KAII PSSLVKNW NE+ KWLG +
Sbjct: 292 MADEMGLGKTLQCIALLWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAI 351
Query: 233 AALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+DG SK E+ L + +GR+ P+L+ SYET RS+ L+ E+G++LCDE
Sbjct: 352 TPFILDGKSSKQELIMALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDE 411
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYFSL++F N G+LG+ QEFRK Y
Sbjct: 412 GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+G+D+ ++ ++ + +L +L IVNR +IRRT+ +LSKYLPVK E VV ++
Sbjct: 472 EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
+ Q LY + I S + + ++G G L +I LKK+CNHPDL+ +
Sbjct: 532 EFQLSLYKHFITSPEINKILRG-----TGSQPLKAIGLLKKICNHPDLL-----NLTEDL 581
Query: 472 ENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
E + P G+ G+ + LS K++VL+ ML IK TDDKIVL+SNYT TLD
Sbjct: 582 EGCEALFPPGFIPRELRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLD 641
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANR 587
LFE+L + RGYK +RLDG+M + KR ++V+TFN + F+F+LSSKAGGCG+NLIGANR
Sbjct: 642 LFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANR 701
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
L++FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD
Sbjct: 702 LILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 761
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCW 706
+DV RHFS+ LR LFQL ++T+ +TH+ KC RC +G Q ++ P + D S W
Sbjct: 762 EAQDVERHFSLDNLRQLFQLNDHTVCETHETYKCKRCRDGKQFIRAPAM---LYGDTSTW 818
Query: 707 HHVT 710
+H T
Sbjct: 819 NHFT 822
>gi|19115202|ref|NP_594290.1| DNA repair protein [Schizosaccharomyces pombe 972h-]
gi|3123262|sp|P41410.2|RAD54_SCHPO RecName: Full=DNA repair protein rhp54; AltName: Full=RAD54 homolog
1
gi|2239180|emb|CAB10100.1| Rad54 homolog Rhp54 [Schizosaccharomyces pombe]
Length = 852
Score = 637 bits (1643), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/604 (53%), Positives = 419/604 (69%), Gaps = 24/604 (3%)
Query: 118 PQLSAHDLLKIDKDKIQ---VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCI 174
P S DLL I K+K V VV+DP L+ ILRPHQ EGVKF+Y+CVTG A GCI
Sbjct: 232 PNKSLKDLLGIQKEKPPPPPVAVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANGCI 291
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRV 232
MADEMGLGKTLQCI L+WTLL+Q P A KP I+KAII PSSLVKNW NE+ KWLG +
Sbjct: 292 MADEMGLGKTLQCIALLWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAI 351
Query: 233 AALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+DG SK E+ L + +GR+ P+L+ SYET RS+ L+ E+G++LCDE
Sbjct: 352 TPFILDGKSSKQELIMALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDE 411
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYFSL++F N G+LG+ QEFRK Y
Sbjct: 412 GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+G+D+ ++ ++ + +L +L IVNR +IRRT+ +LSKYLPVK E VV ++
Sbjct: 472 EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
+ Q LY + I S + + ++G G L +I LKK+CNHPDL+ +
Sbjct: 532 EFQLSLYKHFITSPEINKILRG-----TGSQPLKAIGLLKKICNHPDLL-----NLTEDL 581
Query: 472 ENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
E + P G+ G+ + LS K++VL+ ML IK TDDKIVL+SNYT TLD
Sbjct: 582 EGCEALFPPGFIPRELRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLD 641
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANR 587
LFE+L + RGYK +RLDG+M + KR ++V+TFN + F+F+LSSKAGGCG+NLIGANR
Sbjct: 642 LFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANR 701
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
L++FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD
Sbjct: 702 LILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 761
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCW 706
+DV RHFS+ LR LFQL ++T+ +TH+ KC RC +G Q ++ P + D S W
Sbjct: 762 EAQDVERHFSLDNLRQLFQLNDHTVCETHETYKCKRCRDGKQFIRAPAM---LYGDTSTW 818
Query: 707 HHVT 710
+H T
Sbjct: 819 NHFT 822
>gi|378732226|gb|EHY58685.1| DNA repair protein rhp54 [Exophiala dermatitidis NIH/UT8656]
Length = 805
Score = 636 bits (1640), Expect = e-179, Method: Compositional matrix adjust.
Identities = 342/680 (50%), Positives = 438/680 (64%), Gaps = 58/680 (8%)
Query: 75 FKVPILNYTGGGYSTKA--LGVRREGA--RKALHDPTAPNALVLYTP------------- 117
F +P++N S A LG+RR K LHDP+ A+VLY P
Sbjct: 106 FSIPLINKNAFDPSRPAPTLGMRRGATFVNKPLHDPSGEFAIVLYDPTIDDKPQGKPVLE 165
Query: 118 ------PQL-------SAHDLLKIDK----DKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
P+L S ++L I K ++ +V VV+DP L+ +LRPHQ EGV+F+Y
Sbjct: 166 QAAVEKPKLDTPLMHKSLAEILGIKKEVEGERPKVPVVIDPRLAKVLRPHQVEGVRFLYR 225
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
C TG+ E A GCIMADEMGLGKTLQCITLMWTLL+Q P A KP I K II P+SLVKN
Sbjct: 226 CTTGLVDEKAKGCIMADEMGLGKTLQCITLMWTLLKQSPEAGKPTIHKCIIACPASLVKN 285
Query: 220 WCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHAS 277
W NE+ KWLG G + IDG +K E+ +L + GR P+L++SYE+ R +
Sbjct: 286 WANELVKWLGEGAIHPFAIDGKATKEELTMQLKQWAMASGRSIARPVLIVSYESLRLNIE 345
Query: 278 VLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
L ++GL+LCDEGHRLKN ES+TY AL GL RRV+LSGTPIQNDL EY+SL+ F N
Sbjct: 346 ELRDVKIGLMLCDEGHRLKNAESETYMALTGLNVDRRVILSGTPIQNDLTEYYSLLDFAN 405
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
G LGT +FRK++E PILRG+D+ +D ++ K E L +VN+ LIRRT+ +LSKY
Sbjct: 406 PGYLGTKADFRKKFELPILRGRDAAGTDTDKQKGVEANAGLGSLVNKFLIRRTNDILSKY 465
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LPVK E VV + QK+LY + I+S ++ ++G G L +I LKKLCNHP
Sbjct: 466 LPVKYEHVVFCNLAPFQKDLYNHFIQSPDIKSLLRGK-----GSQPLKAIGILKKLCNHP 520
Query: 458 DLV-MDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTT 513
DL+ ++K G++ F P Y G+ + S K VL+ MLA I+ T
Sbjct: 521 DLLDLEKDLPGSEKF------WPDDYVPKEARGRDRDVRSWYSGKFAVLERMLARIRQDT 574
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLS 572
+DKIVL+SNYTQTLD+FE+L + R Y +RLDG+M + KR K+V+ FN EF+F+LS
Sbjct: 575 NDKIVLISNYTQTLDVFEKLCRSRNYGCLRLDGTMNVNKRQKLVDRFNDPNGEEFVFLLS 634
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF+ TG+IEEK+
Sbjct: 635 SKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFMGTGTIEEKIF 694
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGI-QV 690
QRQ+HK+ALSS VVD EDV RHF++ LR LFQ + T SDTHD KC RC +G+ Q+
Sbjct: 695 QRQSHKQALSSTVVDSAEDVERHFTLDSLRELFQFKPETKSDTHDTFKCKRCRPDGVQQI 754
Query: 691 KPPPLESDCTDDLSCWHHVT 710
K P + D S W+H
Sbjct: 755 KAPAM---LYGDTSSWNHFV 771
>gi|296411575|ref|XP_002835506.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629290|emb|CAZ79663.1| unnamed protein product [Tuber melanosporum]
Length = 812
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 355/742 (47%), Positives = 464/742 (62%), Gaps = 66/742 (8%)
Query: 3 SLAPSQLSK-----RSPEDSPGI-KTFPPPVKKEKRSCTSRKPLGSVDNE---DEPNSKL 53
S P LSK ++P +P I KT PP K+ K + G D E D ++
Sbjct: 30 SAGPDTLSKLVKPFKTPGSAPSIRKTALPPRKRRKVGSYAGADGGEDDGEFVKDGGEKRI 89
Query: 54 PMTKEEMSEHENLIRQ-----ILAKPFKVPILNYTGGGYS----TKALGVRR--EGARKA 102
+ ++ ++ + + + + F VP++N G ++ ALG+R+ K
Sbjct: 90 ILGNLDVMKNFPVFKAKDKEAVFRQRFAVPLVNKDAGAWNPFRPAPALGMRKSVNFIAKP 149
Query: 103 LHDPTAPNALVLYTP---------------------PQLSAHDLL-------KIDKDKI- 133
LHDP+ A+VLY P P H L K DKD++
Sbjct: 150 LHDPSGEFAIVLYDPTIDDKKVEITEEDGEVKIEEKPVPRMHKSLAEILGLNKGDKDQVP 209
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
+V VV+DP LS +LRPHQ EG+KFMY CVTG+ A GCIMADEMGLGKTLQCI LMWT
Sbjct: 210 KVPVVIDPRLSKVLRPHQVEGIKFMYRCVTGMTDAAASGCIMADEMGLGKTLQCIALMWT 269
Query: 194 LLRQGP-LAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGG-SKAEIDNKLN 250
LL+Q P KP I K ++V PSSLV NW +E+ KWLG + IDG SKAE+ +L
Sbjct: 270 LLKQSPEPGKPTIQKCVVVCPSSLVGNWASELVKWLGKDAINPFAIDGKVSKAELKAQLK 329
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ + GR V P+L++SYE+ R H S L +GL+L DEGHRLKN ++QTY+ALM L
Sbjct: 330 QWAISSGRSVVRPVLIVSYESLRLHTSDLASIPIGLLLADEGHRLKNRDNQTYKALMTLN 389
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
RRV+LSGTPIQNDL EYF+L++F N LGT EFRKQYE PILRG+D+ S+ +R K
Sbjct: 390 VDRRVILSGTPIQNDLSEYFALLNFANPNFLGTHNEFRKQYELPILRGRDADGSEDDRKK 449
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
+ERL +L+ +VN+ +IRRT+ +LSKYLPVK E VV K++ Q +LY I S ++
Sbjct: 450 GDERLAELLQLVNKFIIRRTNDILSKYLPVKYEHVVFCKLSPFQTDLYNYFITSPDIKSI 509
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK 490
++G G L +I LKKLCNHPDL+ ++ ++ P Y G+
Sbjct: 510 LRGK-----GSQPLKAIGLLKKLCNHPDLL-----NLSEDLPGCESLYPDDYVPKDARGR 559
Query: 491 ---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
+ + S K+MVLD MLA I+ T DKIVL+SNYTQTLD+FE+L + RGY +RLDG+
Sbjct: 560 DREVKVWYSGKMMVLDRMLARIQRETKDKIVLISNYTQTLDVFEKLCRSRGYGALRLDGT 619
Query: 548 MTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
M KR K+V FN S EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+AR
Sbjct: 620 MNGSKRTKLVAKFNDPDSEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALAR 679
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
VWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LS+ VVD EDV RHF + L+ LF+
Sbjct: 680 VWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSTSVVDGVEDVERHFGLDGLKQLFR 739
Query: 667 LEENTISDTHDKIKCSRCVNGI 688
+ NT SDTHD KC R + I
Sbjct: 740 FQPNTNSDTHDTFKCKRLLGII 761
>gi|325089155|gb|EGC42465.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
H88]
Length = 830
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 350/711 (49%), Positives = 443/711 (62%), Gaps = 84/711 (11%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
Q+ + F VP++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 97 QVFKQRFSVPLINKNSGAYNPNRPAPILGMRSGTTFVVKPLHDPSGEFAIVLYDPTIDDK 156
Query: 118 ----------------------PQLSA-------HDLLKIDK---DKIQVHVVVDPVLSN 145
P+L A D+L I K + ++ VV+DP L+
Sbjct: 157 PVNPNDANDGNGKGEEREKNDPPKLDAPLVHKSLADILGIKKKVDGRPKIPVVIDPKLAK 216
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKT-------------------LQ 186
+LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGKT LQ
Sbjct: 217 VLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTVGSNEFSRWSHGAKYLYFQLQ 276
Query: 187 CITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKA 243
CITL+WTLL+Q P A K I K II PS+LVKNW NE KWLG G V +DG SK
Sbjct: 277 CITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKV 336
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
E+ ++L + + GR V P+L++SYET R + L +GL+LCDEGHRLKN +SQT+
Sbjct: 337 ELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLKNGDSQTF 396
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
AL L RRV+LSGTPIQNDL EYFSL++F N ILGT EF K+YE PILRG+D+
Sbjct: 397 TALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRNEFHKKYEMPILRGRDADG 456
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
SD +R K +E + +L+ +VN+ +IRRT+ +LSKYLPVK E VV ++ Q +LY I+
Sbjct: 457 SDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCQLAPFQTDLYNYFIQ 516
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S ++ ++G G L +I LKKLCNHPDL + GAD + ILP Y
Sbjct: 517 SPDIKSLLRGK-----GSQPLKAIGILKKLCNHPDL----LNLGAD-LPGSEQILPDDYV 566
Query: 484 ASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y
Sbjct: 567 PLESRGRDRDVRSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYG 626
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
+RLDG+M + KR K+V+ FN EF+F+LSSKAGGCG+NL+GANRLV+FDPDWNPA
Sbjct: 627 CLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAA 686
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+
Sbjct: 687 DQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLD 746
Query: 660 ELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 747 SLRELFQFKPETRSDTHDTFKCKRCRPDGTQHIKAPAM---LYGDTSSWNH 794
>gi|388854041|emb|CCF52385.1| probable RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 865
Score = 635 bits (1639), Expect = e-179, Method: Compositional matrix adjust.
Identities = 354/714 (49%), Positives = 455/714 (63%), Gaps = 66/714 (9%)
Query: 71 LAKPFKVPILNYTGGG-----YSTKALGVRR--EGARKALHDPTAPNALVLYTP------ 117
+ K F +P + G S ALG RR + + L+DP +A+VL+ P
Sbjct: 161 IKKGFSLPAMTNKQGQVVETRLSHAALGTRRKIDIPPRPLYDPMGEHAIVLFDPTVDDRE 220
Query: 118 ---------------------------PQLSAHDLLKIDKDKIQ----VHVVVDPVLSNI 146
P S ++L ++K K + V VV+DP L +
Sbjct: 221 AERRKAEIRQEQAAVEEKIEAGAEIPTPHKSLAEILGLNKAKSKEVEKVPVVIDPRLGKV 280
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLI 205
LRPHQ EGVKF+Y C TG+ +E+AYGCIMADEMGLGKTLQCITLMWTLL+Q P+A K I
Sbjct: 281 LRPHQVEGVKFLYRCTTGLIVENAYGCIMADEMGLGKTLQCITLMWTLLKQSPIAGKSTI 340
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAA-LPIDGG-SKAEIDNKLNSFMQTYGRRPVNP 263
DK IIV PSSLV+NW NE+ KWLG L +DG SK E+ + GR P
Sbjct: 341 DKCIIVCPSSLVRNWANELIKWLGAAAPGNLALDGKLSKDEMIEATRRWCNASGRAITQP 400
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
++++SYET R+ L EVGL+LCDEGHRLKN +S T+QAL +K +RRV+LSGTPIQ
Sbjct: 401 VMIVSYETLRNLQEELGNTEVGLLLCDEGHRLKNADSLTFQALTQIKVRRRVILSGTPIQ 460
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
NDL EYF+L++F N +LG+ +FRK +E IL+G+DS A++ ++ +ANE+L QL +V+
Sbjct: 461 NDLSEYFALLNFANPELLGSRIDFRKNFEIAILKGRDSEATEKQQQEANEKLAQLSALVS 520
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
R +IRRT+ LLSKYLPVK E VV KM Q +LY I+S +++ ++G G
Sbjct: 521 RFIIRRTNDLLSKYLPVKYEHVVFCKMAPFQLDLYRLFIRSPEIKKLLRG-----TGSQP 575
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
L +I LKKLCNHPDL+ + + P GY + + ELS K+MVL
Sbjct: 576 LKAIGILKKLCNHPDLLDLPSDL-----DGSEQYFPEGYTPRDRR-HVNPELSGKMMVLQ 629
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK- 562
L I+ TT+DKIVL+SNYTQTLD+FER+ + + RLDG+MTI KR K+V+ FN
Sbjct: 630 RFLETIRATTNDKIVLISNYTQTLDVFERMCQANRWGMFRLDGTMTINKRQKLVDRFNDP 689
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
EFIF+LSSKAGGCGLNLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF+
Sbjct: 690 EGKEFIFLLSSKAGGCGLNLIGANRLVLFDPDWNPASDQQALARVWRDGQKKSCFVYRFI 749
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+TGSIEEK++QRQ+HK++LSSCVVD +D ARHFS +LR+LF +E T+ DTHD KC
Sbjct: 750 ATGSIEEKILQRQSHKQSLSSCVVDEAQDAARHFSGEDLRALFTFKEETVCDTHDTYKCK 809
Query: 683 RCVNGIQ-VKPPPLESDCTDDLSCWHHV--TEKRWLVDPILKHCWGA-GVSFVF 732
RC NG Q +K P L D S W+H E L D +L+ VSFVF
Sbjct: 810 RCKNGRQFIKAPAL---LYGDTSTWNHYGKNEMHNLHDDLLRAEQAYDDVSFVF 860
>gi|451853165|gb|EMD66459.1| hypothetical protein COCSADRAFT_298475 [Cochliobolus sativus
ND90Pr]
Length = 812
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 345/681 (50%), Positives = 437/681 (64%), Gaps = 59/681 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVR--REGARKALHDPTAPNALVLYTPP---------- 118
F VP++N G Y+ LG+R + LHDP+ A+VLY P
Sbjct: 106 FIVPLVNKGTGAYNPNRPAPLLGMRIGTVFVARPLHDPSGEFAIVLYDPTVDDKPEPKQD 165
Query: 119 -----------QLSA---HDLL--------KIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
+L A H L K+D ++ +V VV+DP L+ +LRPHQ EGVK
Sbjct: 166 PEPKEIQTEKKELDAPLVHKSLAEILGLKKKVDNERPRVPVVIDPRLAKVLRPHQVEGVK 225
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y TG+ A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K +I PSS
Sbjct: 226 FLYRATTGMIDPKANGCIMADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCVIACPSS 285
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV+NW NE+ KWLG V IDG SK E+ ++ + GR V P+L++SYET R
Sbjct: 286 LVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLR 345
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ + +GL+LCDEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 346 LYVDEFGQTPIGLMLCDEGHRLKNGDSLTFTALNSLNVQRRVILSGTPIQNDLSEYFALL 405
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N G LGT EFRKQ+E PIL+G+D+ +DA+ K ERL +L+G+VN+ +IRRT+ +
Sbjct: 406 NFANPGYLGTRMEFRKQFEIPILKGRDANGTDADVQKGTERLTELLGLVNKFIIRRTNDI 465
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV + QK+LY + IKS V+ ++G G L I LKKL
Sbjct: 466 LSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGK-----GSQPLKVIGMLKKL 520
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + G E+ LP + G+ + + S K+ VLD MLA I+
Sbjct: 521 CNHPDLL--NLPEDLPGCEDK---LPEDFVQKDARGRDREVKVWYSGKMAVLDRMLARIR 575
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIF 569
T+DKIVL+SNYTQTLD+F L + RGY RLDG+M + KR K+V+ FN S EF+F
Sbjct: 576 AETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVF 635
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEE
Sbjct: 636 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEE 695
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV--NG 687
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +NT SDTHD KC RC +G
Sbjct: 696 KVFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRDNTTSDTHDTFKCKRCRKEDG 755
Query: 688 IQVKPPPLESDCTDDLSCWHH 708
Q+ P + D S W+H
Sbjct: 756 KQIIKAP--AMLYGDTSTWNH 774
>gi|398396748|ref|XP_003851832.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
gi|339471712|gb|EGP86808.1| DNA repair protein, SNF2 family [Zymoseptoria tritici IPO323]
Length = 809
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 344/695 (49%), Positives = 441/695 (63%), Gaps = 62/695 (8%)
Query: 75 FKVPILNYTGGGYSTKA----LGVRREGA--RKALHDPTAPNALVLYTP----------- 117
F VP+ N Y++ LG+R K LHDPT A+VL+ P
Sbjct: 105 FAVPLKNKDTTSYNSSRPPPLLGLRAGTVFVAKPLHDPTGEFAIVLFDPTVDGKAELKEI 164
Query: 118 -----------------PQL--SAHDLLKI----DKDKIQVHVVVDPVLSNILRPHQREG 154
P + S D+L I D ++ +V VV+DP L+ +LRPHQ EG
Sbjct: 165 EDGKDGLEGSQKKKLDEPLMHKSLADILGIKKVVDTERPKVPVVIDPRLAKVLRPHQVEG 224
Query: 155 VKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAP 213
VKFMY C TG+ +A GCIMADEMGLGKTLQCITLMWTLL+Q P A K I K +I P
Sbjct: 225 VKFMYRCTTGLIDANAEGCIMADEMGLGKTLQCITLMWTLLKQSPDAGKSTIQKCVIACP 284
Query: 214 SSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYET 271
SSLV+NW NE+ KWLG + +DG SK E+ ++ S+ GR P+L++SYET
Sbjct: 285 SSLVRNWANELIKWLGPDAINPFAVDGKASKEELTQQMRSWASATGRAVTRPVLIVSYET 344
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
R + L + +GL+LCDEGHRLKN ESQT++AL L +RV+LSGTPIQNDL EYF+
Sbjct: 345 LRLYVDEL-RTPIGLMLCDEGHRLKNGESQTFEALNRLNVSKRVILSGTPIQNDLSEYFA 403
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
L+ F N G LGT EFRK++E PILRG+D+ ++A++ K NERL++L+ +VN+ +IRRT+
Sbjct: 404 LLTFANPGYLGTRLEFRKKFEIPILRGRDASGTEADQQKGNERLKELLELVNKFIIRRTN 463
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+LSKYLPVK E VV + Q +LY IKS ++ ++G G L +I LK
Sbjct: 464 DILSKYLPVKYEHVVFCNLAPFQLDLYNYFIKSPEIQSLLRGK-----GSQPLKAIGLLK 518
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAV 508
KLCNHPDL+ D + P + G+ + S K+ VLD MLA
Sbjct: 519 KLCNHPDLL-----NLPDDLPGCESHFPEDFVPKDARGRDRDVKPWYSGKMQVLDRMLAR 573
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-F 567
I+ T+DKIVL+SNYTQTLD+FE+L + R Y +RLDG+M + KR K+V+ FN E F
Sbjct: 574 IRHDTNDKIVLISNYTQTLDVFEKLCRNRSYGCLRLDGTMAVNKRQKLVDKFNNPDGEEF 633
Query: 568 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+I
Sbjct: 634 VFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTI 693
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
EEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT SDTHD KC RC G
Sbjct: 694 EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPNTTSDTHDTFKCKRCKGG 753
Query: 688 IQ-VKPPPLESDCTDDLSCWHHVTEKRWLVDPILK 721
Q VK P + D S W+H + + P+ +
Sbjct: 754 RQYVKAPAM---LYGDTSSWNHFVNEEGVEGPLAR 785
>gi|358385618|gb|EHK23214.1| hypothetical protein TRIVIDRAFT_220490 [Trichoderma virens Gv29-8]
Length = 802
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 346/712 (48%), Positives = 447/712 (62%), Gaps = 62/712 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRRE--GARKALHDPTAPNALVLYTPPQLSAH 123
+ K F +P+ + + + LG+RR K LHDP+ A+VLY P +
Sbjct: 99 VFRKAFSIPLKDKSQVSFDASRPPPTLGLRRGVVFVPKPLHDPSGEFAIVLYDPTVDAKP 158
Query: 124 DLL-------------------------------KIDKDKIQVHVVVDPVLSNILRPHQR 152
D + ++++D +V VV+DP ++ LRPHQ
Sbjct: 159 DAIQENVVQKEVEPSKIDSPIVHKSLAEILGIKKQVEEDHPKVPVVIDPKIAKCLRPHQI 218
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKFMY+CVTG E A+GCIMADEMGLGKTLQCITLMWTLL+Q P A K I KAI+V
Sbjct: 219 EGVKFMYKCVTGQVDEKAHGCIMADEMGLGKTLQCITLMWTLLKQSPNAGKSTIQKAIVV 278
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
P+SLVKNW NE+TKWLG + IDG K E+ +L + GR P++++SY
Sbjct: 279 CPASLVKNWANELTKWLGPNAINPFAIDGKAPKEEMKRQLRQWAIASGRSITRPVIIVSY 338
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R + L +VGL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQNDL EY
Sbjct: 339 ETLRVNVEELKHTKVGLLFCDEGHRLKNADSTTFSALNDLNVTRRVILTGTPIQNDLTEY 398
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
F+L +F N +LG+ EFRK++E PILRG+D+ AS+ ER + +E +L+GIVNR LIRR
Sbjct: 399 FALTNFANPDLLGSRLEFRKRFEIPILRGRDANASEHERQRGDECTGELLGIVNRFLIRR 458
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ LLSKYLPVK E VV + Q +LY I S ++ ++G G L +I
Sbjct: 459 TNDLLSKYLPVKYEHVVFCNLAPFQIDLYNYFITSPNIQALLRGK-----GSQPLKAINI 513
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTML 506
LKKLCNHPDL+ +D + P Y G+ + S K+ VLD ML
Sbjct: 514 LKKLCNHPDLL-----NLSDDLPGSEKCFPEDYVPKEARGRDRDIKPWYSGKMQVLDRML 568
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSN 565
A I+ T+DKIVL+SNYT TLDLFERL + R Y +RLDG+MT+ KR K+V+ FN +
Sbjct: 569 AKIREDTNDKIVLISNYTSTLDLFERLCRERQYGSLRLDGTMTVNKRQKLVDRFNDPNGD 628
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
EFIF+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQ K CFVYRF++TG
Sbjct: 629 EFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQTKDCFVYRFIATG 688
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC- 684
+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTHD +C RC
Sbjct: 689 TIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTTSDTHDTFRCKRCK 748
Query: 685 VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCW-GAGVSFVF 732
+G Q +K P + D S W+H + + D +L+ + G+ VS VF
Sbjct: 749 PDGRQLIKAPAM---LYGDTSTWNHFVNSGLQPIQDLLLRQEYAGSEVSAVF 797
>gi|159130376|gb|EDP55489.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus fumigatus
A1163]
Length = 681
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 337/659 (51%), Positives = 430/659 (65%), Gaps = 57/659 (8%)
Query: 96 REGAR---KALHDPTAPNALVLYTPP-----------------------------QLSAH 123
R+GA K LHDP+ A+VLY P S
Sbjct: 2 RQGATFVVKPLHDPSGEFAIVLYDPTVDDIGEAPESMPEDKGIEETKAKLDEPLVHKSLA 61
Query: 124 DLLKIDK---DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
D+L + K + +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A GCIMAD MG
Sbjct: 62 DILGLKKKVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGLIDKNANGCIMADGMG 121
Query: 181 LGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPID 238
LGKTLQCI+LMWTLL+Q P A K I K II PSSLV NW NE+ KWLG + ID
Sbjct: 122 LGKTLQCISLMWTLLKQSPEAGKSTIQKCIIACPSSLVGNWANELVKWLGKDAITPFAID 181
Query: 239 G-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
G SKAE+ +++ + GR V P+L++SYET R + L + +GL+LCDEGHRLKN
Sbjct: 182 GKASKAELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLKN 241
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+S T+ AL L RRV+LSGTPIQNDL EYF+L+HF N +LG+ EFRK++E PIL+
Sbjct: 242 KDSLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPILK 301
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G+D+ ++ +R K +ERL +L GIVN+ +IRRT+ +LSKYLP+K E VV ++ Q +L
Sbjct: 302 GRDAAGTEEDRKKGDERLAELSGIVNKFIIRRTNDILSKYLPIKYEHVVFCNLSQFQLDL 361
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + I+S ++ ++G G L +I LKKLCNHPDL+ + G E+
Sbjct: 362 YNHFIQSPEIKSLLRGK-----GSQPLKAIGILKKLCNHPDLL--DLTRDLPGCEHT--- 411
Query: 478 LPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
P Y G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+L
Sbjct: 412 FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKLC 471
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ RGY +RLDG+M I KR K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+FDP
Sbjct: 472 RSRGYGSLRLDGTMNINKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLFDP 531
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV
Sbjct: 532 DWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVE 591
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVT 710
RHFS+ LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 592 RHFSLESLRELFQFKPETRSDTHDTFKCKRCRPDGTQYIKAPAM---LYGDTSSWNHFV 647
>gi|392595792|gb|EIW85115.1| DNA repair protein, SNF2 family [Coniophora puteana RWD-64-598 SS2]
Length = 811
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 332/653 (50%), Positives = 440/653 (67%), Gaps = 30/653 (4%)
Query: 96 REGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDK---IQVHVVVDPVLSNILRPHQR 152
+E AR A LY P + S +L DK + +V VV+DP+LS +LRPHQ
Sbjct: 168 KEEARAKAEQENQMKAAGLYNPHK-SLRAILGEDKPRETVPKVPVVIDPILSKVLRPHQV 226
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIV 211
EGVKF+Y+C TG+ +E+ YGCIMADEMGLGKTLQCI L+WTL++Q P KP I+K II
Sbjct: 227 EGVKFLYKCTTGMVVENQYGCIMADEMGLGKTLQCIALLWTLVKQSPRPGKPTIEKCIIA 286
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
PSSLVKNW NE++KWLG ++AL +DG G K E+ K+ ++ GR P++++SY
Sbjct: 287 CPSSLVKNWANELSKWLGKDTISALAVDGKGGKGELLEKVARWVAASGRNVTQPVMIVSY 346
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R+ + L +GL+LCDEGHRLKN ES T+QAL L +RRV+L+GTPIQNDL EY
Sbjct: 347 ETLRTLTAHLASCSIGLLLCDEGHRLKNSESLTFQALNSLDVRRRVILTGTPIQNDLSEY 406
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
FSL++F N LG+ +FRK +E I+RG+D+ ASDA + + ++L++L +V + +IRR
Sbjct: 407 FSLLNFANPNFLGSKVDFRKNFENAIIRGRDANASDAFQAECEKKLKELGNLVTKFIIRR 466
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ LLSKYLPVK E VV +++ Q LY I S ++ ++G E+ L +I
Sbjct: 467 TNDLLSKYLPVKYEHVVFCGLSEFQLSLYRLFISSPEIKALLRGTESQ-----PLKAINM 521
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK-----LLIELSAKLMVLDT 504
LKKLCNHP L+ D + +++P ++ S SG+ L + K +VL+
Sbjct: 522 LKKLCNHPQLL-----NLPDDLRGSDHLIPDDFSGSNSSGRGKTQNLRCDWGGKFIVLER 576
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-T 563
L ++ TT+DKIVL+SNYTQTLDLFE+L + + Y Y RLDG+M+I KR K+V+ FN
Sbjct: 577 FLHQMRTTTNDKIVLISNYTQTLDLFEKLCRSKKYGYFRLDGTMSITKRQKLVDQFNNPE 636
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+S
Sbjct: 637 GKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFIS 696
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQA K+ALSS VVD +ED RHFS+ LR LF +ENT+S+TH+ KC R
Sbjct: 697 TGTIEEKIFQRQASKQALSSAVVDEKEDAERHFSLEALRQLFLFKENTLSETHETFKCKR 756
Query: 684 CVNGIQV-KPPPLESDCTDDLSCWHHVTEKRW--LVDPILKHCWG-AGVSFVF 732
C +G QV K P L D S W+H T K + D +L+ G +SFVF
Sbjct: 757 CKDGRQVLKSPAL---LYGDASTWNHFTNKELENIHDDLLRAETGLPDISFVF 806
>gi|430812744|emb|CCJ29865.1| unnamed protein product [Pneumocystis jirovecii]
Length = 796
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 361/763 (47%), Positives = 478/763 (62%), Gaps = 69/763 (9%)
Query: 5 APSQLSKRSPEDSPG---IKTFPPPVKK----EKRSCTSRKPLGSVDNEDEPNSKLPMTK 57
A S LS R P G + F P K E R ++ + V+N+ E K
Sbjct: 18 ASSSLSSRKPLHDIGNVLSRAFKIPSYKKEVEEGRQLRKKRKILYVNNDLEEKEDDFFRK 77
Query: 58 E-EMSEHENL-------IRQILAKPFKVPILNYT--GGGYSTK---ALGVRR--EGARKA 102
E E +++E+ + +L + FKVP+++ + G + + LG R + +
Sbjct: 78 ENEKTQNESYPVFQAKDVSTVLKRKFKVPMIDKSELNGQWKNRLPPVLGTLRPVKFVPRP 137
Query: 103 LHDPTAPNALVLYTPPQLSAHD--------------------------LLKIDKDKI--Q 134
LHDP ++VLY P HD +L I K +
Sbjct: 138 LHDPCGEFSIVLYDPTIDDFHDKEEEENRKEIPEKPKNGPKTHKSLAEILGIKKQEKYPN 197
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP LS ILRPHQ EGVKF+Y+CVTG+ A GCIMADEMGLGKTLQCITLMWTL
Sbjct: 198 VAVVIDPKLSKILRPHQIEGVKFLYKCVTGMVDFRANGCIMADEMGLGKTLQCITLMWTL 257
Query: 195 LRQGPLAK-PLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPID-GGSKAEIDNKLNS 251
L+Q P AK I KAIIV PSSLV+NW NE+ KWLG G + L ID ++ ++ L+
Sbjct: 258 LKQSPQAKRSTIQKAIIVCPSSLVRNWANELDKWLGKGTINPLIIDKKNNRDQLVLSLSK 317
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
++ G+ V PIL+ISYE R + L K +GL+LCDEGHRLKN ES T+ AL L+
Sbjct: 318 WVSATGKDIVQPILIISYEMLRMNIDQLKKCPIGLLLCDEGHRLKNSESLTFSALDSLQV 377
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RR++LSGTPIQNDL EYFSL++FVN G+LG+ EFRK +E PIL+G+D+ +D +R
Sbjct: 378 QRRIILSGTPIQNDLSEYFSLLNFVNPGLLGSRSEFRKTFELPILKGRDALGTDKDREIG 437
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+ +LE+L +VN+ +IRRT+ +LSKYLPVK E VV ++ QK+LY + + S V +
Sbjct: 438 DHKLEELSVLVNKFIIRRTNDILSKYLPVKYEHVVFCNLSPFQKDLYKSFVSSREVNNLV 497
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY-AASYKSGK 490
KG +G L +I LKKLCNHP L+ I+ FE+ P + + K
Sbjct: 498 KG-----IGNQPLKAIDFLKKLCNHPTLL--DIENDLKQFEHC---FPNDFIPKNSKDRD 547
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
+ I S K+MVLD MLA I+ T+DKIVL+SNYTQTL+L E+L + R Y +RLDG+M
Sbjct: 548 IKIWYSGKMMVLDRMLARIRKDTNDKIVLISNYTQTLNLLEKLCRSRRYGSLRLDGTMNT 607
Query: 551 KKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
KR K+++ FN S+EFIF+LSSKAGGCGLNLIGANRL++FDPDWNPA D QA+ARVWR
Sbjct: 608 NKRQKLIDKFNDPESDEFIFLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQALARVWR 667
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
DGQKK CF+YRF++TG+IEEK+ QRQ+HK++LSSCVVD ++V RHFS+ LR LF+L
Sbjct: 668 DGQKKDCFIYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQNVERHFSLDSLRQLFELNL 727
Query: 670 NTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVTE 711
+T+ DTHD KC RC N Q +K P L D S W+H ++
Sbjct: 728 DTLCDTHDTFKCKRCKNDKQFIKAPAL---LYGDTSTWNHFSK 767
>gi|353234334|emb|CCA66360.1| probable RAD54-DNA-dependent ATPase of the Snf2p family
[Piriformospora indica DSM 11827]
Length = 819
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 358/729 (49%), Positives = 456/729 (62%), Gaps = 78/729 (10%)
Query: 69 QILAKPFKVPILN-----YTGGGYSTKALGVRR--EGARKALHDPTAPNALVLYTP---- 117
++ A+ F +P + Y G S ALGVR + + LHDP A +++VLY P
Sbjct: 99 KVFAQRFTIPGMKTKDGKYISVGLSGTALGVRPIVKLLPRPLHDPMAEHSIVLYDPTIDD 158
Query: 118 --------------------------------PQLSAHDLLKIDKDK----IQVHVVVDP 141
P S +LL D+ + +V VV+DP
Sbjct: 159 RESDEERLERLREEAKEEERKAARAKIEGLYNPHKSLRELLGEDQTRKKLSQKVPVVIDP 218
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
VLS ILRPHQ EGVKF+Y C +G+ +E+ YGCIMAD MGLGKTLQ I+L+WTLL+Q P A
Sbjct: 219 VLSKILRPHQIEGVKFLYRCTSGMVVENQYGCIMADGMGLGKTLQTISLIWTLLKQSPHA 278
Query: 202 -KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGR 258
KP I+K II PSSLV+NW NE+ KWLG G V +DG G KAE+ + ++ GR
Sbjct: 279 GKPTIEKCIISCPSSLVRNWANELDKWLGKGTVGCFALDGRGKKAEVIEGVRRWVAARGR 338
Query: 259 RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
P+++ SYET R+ A L E+GL++CDEGHRLKN +SQT+Q L LK +RRV+LS
Sbjct: 339 NVTLPVMICSYETLRTLAQELANCEIGLLICDEGHRLKNGDSQTFQILTSLKVQRRVILS 398
Query: 319 GTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
GTPIQNDL EYFSL++F N LGT EFRK +E I+RG+D+ A+DA + + +L++L
Sbjct: 399 GTPIQNDLSEYFSLLNFANPNYLGTQAEFRKNFENTIIRGRDADATDAVKDASEAKLKEL 458
Query: 379 IGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTK 438
+V +IRRT+ LLSKYLP+K EQVV + ++LQ LY I S ++ ++G
Sbjct: 459 GALVAPFIIRRTNELLSKYLPIKYEQVVFCRPSELQLALYRLFITSPEIKSLLRGK---- 514
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS---------- 488
G L +I LKKLCNHP+L+ + G E +LP GY +
Sbjct: 515 -GSQPLKAIGLLKKLCNHPELL--DLPGELAGSEE---LLPPGYGMGNSTRNLGGRERAP 568
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
L +LS K +VL+ ML IK T DKIVL+SNYT TLDL ERL + +GY Y RLDG M
Sbjct: 569 AMLDCQLSGKFIVLERMLHHIKTQTTDKIVLISNYTATLDLMERLCRAKGYGYFRLDGQM 628
Query: 549 TIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARV
Sbjct: 629 GISKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARV 688
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WRDGQKK CFVYRF+ TGSIEEK+ QRQA K+ALSSCVVD +ED RHFS+ LR LF+
Sbjct: 689 WRDGQKKECFVYRFVMTGSIEEKIFQRQAQKQALSSCVVDEKEDTERHFSLDMLRKLFEF 748
Query: 668 EENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCW 724
E T+SDTHD KC RC +G+Q VK P L D S W+H T E + D +L+
Sbjct: 749 TETTLSDTHDTFKCKRCKDGVQHVKAPAL---LYGDASTWNHFTNGELKNNHDDLLRAEV 805
Query: 725 G-AGVSFVF 732
G VSFVF
Sbjct: 806 GLPEVSFVF 814
>gi|121700154|ref|XP_001268342.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
gi|119396484|gb|EAW06916.1| SNF2 family N-terminal domain protein [Aspergillus clavatus NRRL 1]
Length = 682
Score = 634 bits (1635), Expect = e-179, Method: Compositional matrix adjust.
Identities = 339/658 (51%), Positives = 430/658 (65%), Gaps = 58/658 (8%)
Query: 96 REGAR---KALHDPTAPNALVLYTPP------------------------------QLSA 122
R+GA K LHDP+ A+VLY P S
Sbjct: 2 RQGATFIVKPLHDPSGEFAIVLYDPTVDDVDEAPESKNPDEQSAEGTKAKLDEPLMHKSL 61
Query: 123 HDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
D+L + KD + +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A GCIMAD M
Sbjct: 62 ADILGLKKDVESRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDKNANGCIMADGM 121
Query: 180 GLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPI 237
GLGKTLQCI+LMWTLL+Q P A K I K II PSSLV NW NE+ KWLG V +
Sbjct: 122 GLGKTLQCISLMWTLLKQSPEAGKTTIQKCIIACPSSLVGNWANELVKWLGKDAVTPFAV 181
Query: 238 DGG-SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
DG KAE+ +++ + GR V P+L++SYET R + L + +GL+LCDEGHRLK
Sbjct: 182 DGKVPKAELTSQIKQWAIASGRSVVRPVLIVSYETLRMYVDALKDSPIGLLLCDEGHRLK 241
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ES T+ AL L RRV+LSGTPIQNDL EYF+L+HF N +LG+ EFRK++E PIL
Sbjct: 242 NKESLTWTALNSLNVTRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFEIPIL 301
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
+G+D+ ++ +R K +ERL +L GIVN+ +IRRT+ +LSKYLPVK E VV ++ Q
Sbjct: 302 KGRDAAGTEEDRKKGDERLLELSGIVNKFIIRRTNDILSKYLPVKYEHVVFCNLSQFQLG 361
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
LY + I+S ++ ++G G L +I LKKLCNHPDL+ + G E+
Sbjct: 362 LYNHFIQSPEIKSLLRGK-----GSQPLKAIGLLKKLCNHPDLL--DLSRDLPGCEHTY- 413
Query: 477 ILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
P Y G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+L
Sbjct: 414 --PEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEKL 471
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
+ RGY +RLDG+MT+ KR K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+FD
Sbjct: 472 CRSRGYGSLRLDGTMTVNKRQKLVDKFNDPNGEEFVFLLSSKAGGCGLNLIGANRLVLFD 531
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD EDV
Sbjct: 532 PDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAEDV 591
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
RHFS+ LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 592 ERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPDGTQHIKAPAM---LYGDTSSWNH 646
>gi|392567178|gb|EIW60353.1| DNA repair protein SNF2 family [Trametes versicolor FP-101664 SS1]
Length = 817
Score = 633 bits (1633), Expect = e-178, Method: Compositional matrix adjust.
Identities = 350/699 (50%), Positives = 451/699 (64%), Gaps = 70/699 (10%)
Query: 91 ALGVRREG--ARKALHDPTAPNALVLYTP------------------------------- 117
ALG+R + LHDP +A+VLY P
Sbjct: 127 ALGIRPLANIIPRPLHDPMEDHAIVLYDPTIDDRETDEERKEREKEEAKEKALKEAQEKC 186
Query: 118 -----PQLSAHDLLKIDKDKI----QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
P S +LL KDK +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ +E
Sbjct: 187 AGMYNPHKSLKELLGGGKDKKRHAHKVPVVIDPRLTKVLRPHQVEGVKFLYRCTTGMVVE 246
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKW 227
+ YGCIMADEMGLGKTLQCI L+WTLL+Q P A +P I+K II PSSLVKNW NE+ KW
Sbjct: 247 NQYGCIMADEMGLGKTLQCIALLWTLLKQSPHAGRPTIEKCIIACPSSLVKNWANELVKW 306
Query: 228 LG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
LG ++AL IDG G KAE+ K+ ++ + GR P++++SYET R+ + L +G
Sbjct: 307 LGKDAISALAIDGKGGKAEMLEKVARWVASCGRNVSQPVMIVSYETLRTLSVHLANCSIG 366
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L+LCDEGHRLKN ES T+QAL GL KRRV+LSGTPIQNDL EYFSL++F N LG+
Sbjct: 367 LLLCDEGHRLKNSESLTFQALNGLNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGSKN 426
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
+FRK +E I+RG+D+ A+DA +++ ++L++L +V + +IRRT+ LLSKYLPVK EQV
Sbjct: 427 DFRKNFENAIIRGRDADATDAAKSECEKKLKELGALVAKFIIRRTNDLLSKYLPVKYEQV 486
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
V K++D Q LY I S ++ ++G E+ L +I LKKLCNHP+L+ +
Sbjct: 487 VFCKLSDFQLSLYRLFISSPEIQALLRGAES-----QPLKAINILKKLCNHPELL--DLP 539
Query: 466 TGADGFENAMNILPTGYAASYKSGK-------LLIELSAKLMVLDTMLAVIKMTTDDKIV 518
G E +LP GYA + +G+ + E K +VL+ L I T+DKIV
Sbjct: 540 GDLRGCE---KLLPEGYAGAGATGRDKGRNQGVNCEWGGKFLVLERFLHRIHTETNDKIV 596
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGG 577
L+SNYTQTLDLFE+L + + Y + RLDG+MTI KR K+V++FN EFIF+LSSKAGG
Sbjct: 597 LISNYTQTLDLFEKLCRSKKYGHFRLDGTMTINKRQKLVDSFNDPNGKEFIFLLSSKAGG 656
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
CG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QRQA+
Sbjct: 657 CGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAN 716
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLE 696
K+ALSS VVD +ED RHFS+ LR LF ENT+ +TH+ KC RC G Q VK L
Sbjct: 717 KQALSSAVVDEKEDAERHFSIDALRKLFLFNENTLCETHETFKCKRCKEGRQFVKSKAL- 775
Query: 697 SDCTDDLSCWHHVT--EKRWLVDPILKHCWG-AGVSFVF 732
D S W+H T E R D +L+ G VSF F
Sbjct: 776 --LYGDASTWNHFTNAELRNNHDDLLRGETGLPEVSFAF 812
>gi|330930041|ref|XP_003302867.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
gi|311321495|gb|EFQ89043.1| hypothetical protein PTT_14851 [Pyrenophora teres f. teres 0-1]
Length = 812
Score = 632 bits (1631), Expect = e-178, Method: Compositional matrix adjust.
Identities = 345/681 (50%), Positives = 434/681 (63%), Gaps = 59/681 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGA--RKALHDPTAPNALVLYTP----------- 117
F VP++N G Y+ LG+R + LHDP+ A+VLY P
Sbjct: 106 FIVPLVNKDTGAYNPNRPAPLLGMRTGTVFVARPLHDPSGEFAIVLYDPTVDDKPIPKEE 165
Query: 118 --PQLS-----------AHDLL--------KIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
P+LS H L K++ ++ +V VV+DP L+ +LRPHQ EGVK
Sbjct: 166 IEPKLSQPEKKELEAPLVHKSLAEILGLKKKVEGERPRVPVVIDPRLAKVLRPHQVEGVK 225
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y TG+ A GCIMADEMGLGKTLQCI LMWTLL+Q P A K I K +I PSS
Sbjct: 226 FLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMWTLLKQSPEAGKSTIQKCVIACPSS 285
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV+NW NE+ KWLG V IDG SK E+ ++ + GR V P+L++SYET R
Sbjct: 286 LVRNWANELVKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRAVVRPVLIVSYETLR 345
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+A + +GL+LCDEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 346 LYAEEFGQTPIGLMLCDEGHRLKNGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALL 405
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N LGT EFRK YE PIL+G+D+ +D + K ERL +L+G+VN+ +IRRT+ +
Sbjct: 406 NFANPNYLGTRMEFRKHYEIPILKGRDANGTDEDVKKGTERLTELLGLVNKFIIRRTNDI 465
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV + QK+LY + IKS V+ ++G G L I LKKL
Sbjct: 466 LSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGK-----GSQPLKVIGMLKKL 520
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + G EN LP + G+ + S K+ VLD MLA I+
Sbjct: 521 CNHPDLL--NLPEDLPGCENT---LPDDFVQKDARGRDREVKTWYSGKMAVLDRMLARIR 575
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIF 569
T+DKIVL+SNYTQTLD+F L + RGY RLDG+M + KR K+V+ FN S EF+F
Sbjct: 576 AETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVF 635
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEE
Sbjct: 636 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEE 695
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV--NG 687
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT+SDTHD KC RC +G
Sbjct: 696 KVFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRNNTMSDTHDTFKCKRCRKEDG 755
Query: 688 IQVKPPPLESDCTDDLSCWHH 708
QV P + D S W+H
Sbjct: 756 RQVIKAP--AMLYGDTSTWNH 774
>gi|449547038|gb|EMD38006.1| DNA repair protein SNF2 family [Ceriporiopsis subvermispora B]
Length = 814
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 352/726 (48%), Positives = 460/726 (63%), Gaps = 78/726 (10%)
Query: 71 LAKPFKVPILNYTGG-----GYSTKALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+ + F +P + G S ALG+R + LHDP +A+VLY P
Sbjct: 98 ITRRFSLPTMRNKNGEIIPTTQSNVALGIRPLANIIPRPLHDPMEDHAIVLYDPTIDHRE 157
Query: 118 ------------------------------PQLSAHDLLKIDKDKIQ----VHVVVDPVL 143
P S +LL K+K + V VV+DP L
Sbjct: 158 TDEERKEREREEAKVKAMEEAREKTAGMYNPHKSLKELLGGGKEKKKQNNKVPVVIDPRL 217
Query: 144 SNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-K 202
S +LRPHQ EGVKF+Y+C TG+ +++ YGCIMADEMGLGKTLQCI LMWTLL+Q P A +
Sbjct: 218 SKVLRPHQVEGVKFLYKCTTGMMVDNQYGCIMADEMGLGKTLQCIALMWTLLKQSPHASR 277
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRP 260
P IDK II P+SLVKNW NE+ KWLG ++AL IDG G KAE+ ++ ++ GR
Sbjct: 278 PTIDKCIIACPASLVKNWANELAKWLGKDTISALAIDGKGGKAEMLERVARWVAASGRNV 337
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
P++++SYET R+ A+ L +GL+LCDEGHRLKN ESQT+Q L L KRRV+LSGT
Sbjct: 338 SQPVMIVSYETLRTLAAHLQNCPIGLLLCDEGHRLKNSESQTFQVLNELNVKRRVILSGT 397
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
PIQNDL EYFSL++F N LG+ +FRK +E I+RG+D+ ASDA + +++L++L
Sbjct: 398 PIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADASDAIKAACDKKLKELGD 457
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
+V + +IRRT+ LLSKYLPVK EQVV ++ LQ LY I S ++ ++G ++
Sbjct: 458 LVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSPLQLSLYRLFISSPEIQALLRGTDSQ--- 514
Query: 441 MTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGK--------L 491
L +I LKKLCNHP+L+ + G+D +LP Y + + K +
Sbjct: 515 --PLKAINILKKLCNHPELLDLPGDLRGSD------KLLPEEYIGAGANAKGRGGRNQVV 566
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
E S K +VL+ L I+ T+DKIVL+SNYTQTLDLFE+L + +GY Y RLDG+MTI
Sbjct: 567 HCEWSGKFVVLERFLHRIRTETNDKIVLISNYTQTLDLFEKLLRTKGYGYFRLDGTMTIN 626
Query: 552 KRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRD
Sbjct: 627 KRQKLVDQFNNPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRD 686
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQKK CFVYRF++TG+IEEK+ QRQA K++LSS VVD +EDV RHFS+ LR LF EN
Sbjct: 687 GQKKECFVYRFITTGTIEEKIFQRQASKQSLSSAVVDEKEDVERHFSIDSLRKLFLFNEN 746
Query: 671 TISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWGAG 727
T+ +TH+ KC RC +G Q +K P L D S W+H T E + D +L+ G
Sbjct: 747 TLCETHETFKCKRCKDGRQTMKAPAL---LYGDASTWNHFTNGELKNNHDDLLRAEVGQP 803
Query: 728 -VSFVF 732
VSFVF
Sbjct: 804 EVSFVF 809
>gi|189211141|ref|XP_001941901.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187977994|gb|EDU44620.1| helicase swr1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 812
Score = 631 bits (1627), Expect = e-178, Method: Compositional matrix adjust.
Identities = 344/681 (50%), Positives = 433/681 (63%), Gaps = 59/681 (8%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGA--RKALHDPTAPNALVLYTP----------- 117
F VP++N G Y+ LG+R + LHDP+ A+VLY P
Sbjct: 106 FIVPLVNKDTGAYNPNRPAPLLGMRTGTVFVARPLHDPSGEFAIVLYDPTVDDKPIPKGE 165
Query: 118 --PQLS-----------AHDLL--------KIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
P+LS H L K++ ++ +V VV+DP L+ +LRPHQ EGVK
Sbjct: 166 IEPKLSQPEKKELEAPIVHKSLAEILGLKKKVEGERPRVPVVIDPRLAKVLRPHQVEGVK 225
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSS 215
F+Y TG+ A GCIMADEMGLGKTLQCI LMWTLL+Q P A K I K +I PSS
Sbjct: 226 FLYRATTGMIDPKANGCIMADEMGLGKTLQCIALMWTLLKQSPEAGKSTIQKCVIACPSS 285
Query: 216 LVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
LV+NW NE+ KWLG V IDG SK E+ ++ + GR V P+L++SYET R
Sbjct: 286 LVRNWANELIKWLGKDAVTPFAIDGKASKEELIQQIRQWSIASGRSVVRPVLIVSYETLR 345
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+A + +GL+LCDEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYF+L+
Sbjct: 346 LYADEFGQTPIGLMLCDEGHRLKNGDSLTFTALNNLNVQRRVILSGTPIQNDLSEYFALL 405
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
+F N LGT EFRK YE PIL+G+D+ +D + K ERL +L+G+VN+ +IRRT+ +
Sbjct: 406 NFANPNYLGTRMEFRKHYEIPILKGRDANGTDEDVKKGTERLTELLGLVNKFIIRRTNDI 465
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLPVK E VV + QK+LY + IKS V+ ++G G L I LKKL
Sbjct: 466 LSKYLPVKYEHVVFCNLAPFQKDLYNHFIKSPDVQSLLRGK-----GSQPLKVIGMLKKL 520
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIK 510
CNHPDL+ + G EN LP + G+ + S K+ VLD MLA I+
Sbjct: 521 CNHPDLL--NLPEDLPGCENT---LPDDFVQKDARGRDREVKTWYSGKMAVLDRMLARIR 575
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIF 569
T+DKIVL+SNYTQTLD+F L + RGY RLDG+M + KR K+V+ FN S EF+F
Sbjct: 576 AETNDKIVLISNYTQTLDIFAMLCRSRGYGCFRLDGTMNVSKRQKLVDKFNDPESPEFVF 635
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEE
Sbjct: 636 LLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFITTGTIEE 695
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV--NG 687
K+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT SDTHD KC RC +G
Sbjct: 696 KVFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRNNTTSDTHDTFKCKRCRKEDG 755
Query: 688 IQVKPPPLESDCTDDLSCWHH 708
Q+ P + D S W+H
Sbjct: 756 RQIIKAP--AMLYGDTSTWNH 774
>gi|85092588|ref|XP_959470.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|28920899|gb|EAA30234.1| DNA repair and recombination protein RAD54 [Neurospora crassa
OR74A]
gi|40804592|emb|CAF05853.1| Rad54 homolog MUS-25 [Neurospora crassa]
Length = 831
Score = 630 bits (1626), Expect = e-178, Method: Compositional matrix adjust.
Identities = 343/688 (49%), Positives = 436/688 (63%), Gaps = 61/688 (8%)
Query: 69 QILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP---- 117
Q+ K F VP++N Y+ LG+R +GA K LHDP A+VLY P
Sbjct: 104 QVFRKAFSVPLINKNTTAYNPNRPPPTLGLR-QGAVFVAKPLHDPCDEFAIVLYDPTVDD 162
Query: 118 -PQLSAHDLL----------------------------KIDKDKIQVHVVVDPVLSNILR 148
P+ +A + + K++ + +V VV+DP L+ +LR
Sbjct: 163 KPKDTAPEAIEEKKEEPEVKVDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLR 222
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGV+FMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I K
Sbjct: 223 PHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQK 282
Query: 208 AIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+ PSSLV+NW NE+ KWLG + IDG SK E+ +L + GR P++
Sbjct: 283 AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVI 342
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQND
Sbjct: 343 IVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQND 402
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYF+L+ F N +LGT EFRK++E PILRG+D+ AS+AER + +E L +L+ IVN+
Sbjct: 403 LSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERKRGDECLVELLAIVNKF 462
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY + S ++ ++G G L
Sbjct: 463 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGK-----GSQPLK 517
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL + AD P Y G+ + S K+ VL
Sbjct: 518 AINILKKLCNHPDL----LDLSAD-LPGCEQYWPEDYVPKEARGRDRDVKPWYSGKMQVL 572
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+ FN
Sbjct: 573 DRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFND 632
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 633 PEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 692
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LF T SDTHD KC
Sbjct: 693 IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFTYRPGTKSDTHDTFKC 752
Query: 682 SRC-VNGIQVKPPPLESDCTDDLSCWHH 708
RC +G Q ++ D S W+H
Sbjct: 753 KRCKPDGRQYM--KAQAMLYGDTSTWNH 778
>gi|238487360|ref|XP_002374918.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
gi|220699797|gb|EED56136.1| dsDNA-dependent ATPase Rad54, putative [Aspergillus flavus
NRRL3357]
Length = 682
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 338/660 (51%), Positives = 433/660 (65%), Gaps = 58/660 (8%)
Query: 96 REGAR---KALHDPTAPNALVLYTP-----------------------PQLSA------- 122
R+GA K LHDP+ A+VLY P P+L A
Sbjct: 2 RQGATFVVKPLHDPSGEFAIVLYDPTVDDADENSETKLPEDGKPEEQQPKLDAPLVHKSL 61
Query: 123 HDLLKIDKDKIQ----VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
D+L + K K++ V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A+GCIMAD
Sbjct: 62 ADILGLKK-KVETGPRVPVVIDPRLAKVLRPHQIEGVKFLYRCTTGMVDKNAHGCIMADG 120
Query: 179 MGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALP 236
MGLGKTLQCI+LMWTLL+Q P A K LI K II PSSLV NW NE+ KWLG +
Sbjct: 121 MGLGKTLQCISLMWTLLKQSPEAGKTLIQKCIIACPSSLVGNWANELVKWLGKDAITPFA 180
Query: 237 IDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
+DG SK E+ +++ + GR V P+L++SYET R + L + +GL+LCDEGHRL
Sbjct: 181 VDGKASKTELTSQIKQWAIASGRAVVRPVLIVSYETLRMYVEALKDSPIGLLLCDEGHRL 240
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN +S T+ AL L +RRV+LSGTPIQNDL EYF+L++F N +LG+ EFRK++E PI
Sbjct: 241 KNKDSLTWTALNSLNVQRRVILSGTPIQNDLSEYFALLNFANPDLLGSQNEFRKRFELPI 300
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
LRG+D+ SD ++ K +E L +L IVN+ +IRRT+ +L+KYLPVK E VV ++ Q
Sbjct: 301 LRGRDAAGSDEDKKKGDECLAELSTIVNKFIIRRTNDILTKYLPVKYEHVVFCNLSQFQL 360
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAM 475
+LY + I+S +R ++G G L +I LKKLCNHPDL+ + T G E A
Sbjct: 361 DLYNHFIQSPEIRSLLRGK-----GSQPLKAIGLLKKLCNHPDLL--NLSTDLPGCEFA- 412
Query: 476 NILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
P Y G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+
Sbjct: 413 --FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEK 470
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L + RGY +RLDG+M + KR K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+F
Sbjct: 471 LCRSRGYGSLRLDGTMNVNKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 530
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD ED
Sbjct: 531 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAED 590
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHHVT 710
V RHFS+ LR LFQ + T SDTHD KC RC +G Q ++ D S W+H
Sbjct: 591 VERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPDGAQFIKA--QAMLYGDTSTWNHFV 648
>gi|295664715|ref|XP_002792909.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226278430|gb|EEH33996.1| SNF2 family N-terminal domain containing protein [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 682
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 337/650 (51%), Positives = 425/650 (65%), Gaps = 55/650 (8%)
Query: 101 KALHDPTAPNALVLYTP-----------------------PQLSA-------HDLLKIDK 130
K LHDP+ A+VLY P P+L A D+L I K
Sbjct: 10 KPLHDPSGEFAIVLYDPTIDDKPADRDGGEGGKQAENPDIPKLDAPLVHKSLADILGIKK 69
Query: 131 D---KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
+ ++ VV+DP L+ +LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGKTLQC
Sbjct: 70 KVETRPRIPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTLQC 129
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAE 244
ITL+WTLL+Q P A K I K +I PS+LVKNW NE+ KWLG V IDG +KAE
Sbjct: 130 ITLLWTLLKQSPEAGKTTIQKCVIACPSTLVKNWANELVKWLGKDAVTPFVIDGKATKAE 189
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+ ++L + + GR V P+L++SYET R + + ++GL+LCDEGHRLKN +SQT+
Sbjct: 190 LTSQLRQWAISSGRAVVRPVLIVSYETLRLNVDEIKDTQIGLLLCDEGHRLKNGDSQTFT 249
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL L RRV+LSGTPIQNDL EYFSL++F N ILGT EF K++E PILRG+D+ +
Sbjct: 250 ALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRSEFHKKFEMPILRGRDADGT 309
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
D +R K +E + +L+ IVN+ +IRRT+ +LSKYLPVK E VV + Q +LY I+S
Sbjct: 310 DEDRKKGDETVAELLAIVNKFIIRRTNDILSKYLPVKYEHVVFCGLAPFQTDLYNYFIQS 369
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
++ ++G G L +I LKKLCNHPDL + GAD P Y
Sbjct: 370 PDIKSLLRGK-----GSQPLKAIGILKKLCNHPDL----LNLGAD-LPGCEQFFPEDYIP 419
Query: 485 SYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y
Sbjct: 420 IESRGRDRDVRSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSRQYGC 479
Query: 542 VRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
+RLDGSM + KR K+V+ FN EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D
Sbjct: 480 LRLDGSMNVTKRQKLVDKFNDPEGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAAD 539
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+
Sbjct: 540 QQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDS 599
Query: 661 LRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 600 LRELFQFKPVTRSDTHDTFKCKRCGPDGTQHIKAPAM---LYGDTSSWNH 646
>gi|336272956|ref|XP_003351233.1| RAD54 protein [Sordaria macrospora k-hell]
gi|380092753|emb|CCC09506.1| putative RAD54 protein [Sordaria macrospora k-hell]
Length = 824
Score = 630 bits (1624), Expect = e-177, Method: Compositional matrix adjust.
Identities = 351/724 (48%), Positives = 446/724 (61%), Gaps = 73/724 (10%)
Query: 44 DNEDEPNSKLPMTKEEMSEHENL------------IRQILAKPFKVPILNYTGGGYSTK- 90
DN+DE + P T + N Q+ K F VP++N Y+
Sbjct: 66 DNDDEDGADKPYTNADRLALANRDANKFPVFQPKDKSQVFRKAFSVPLINKNTTAYNPNR 125
Query: 91 ---ALGVRREGA---RKALHDPTAPNALVLYTP------------------PQLSAHDLL 126
LG+R +GA K LHDP A+VLY P P++ L
Sbjct: 126 PPPTLGLR-QGAVFVAKPLHDPCDDLAIVLYDPTVDDKPKEPKAIEEKQKEPEVKVDAPL 184
Query: 127 -------------KIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
K++ + +V VV+DP L+ +LRPHQ EGV+FMY CVTG+ E A GC
Sbjct: 185 VHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLRPHQIEGVRFMYRCVTGMIDEKANGC 244
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-R 231
IMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+ PSSLV+NW NE+ KWLG
Sbjct: 245 IMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQKAIVACPSSLVRNWANELVKWLGADA 304
Query: 232 VAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
+ IDG SK E+ +L + GR P++++SYET R +A L +GL+LCD
Sbjct: 305 ITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVIIVSYETLRLNADELKGTPIGLMLCD 364
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN +SQT+ AL L RRV+LSGTPIQNDL EYF+L+ F N +LGT EFRK+
Sbjct: 365 EGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQNDLSEYFALISFANPDLLGTRLEFRKR 424
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E PILRG+D+ AS+AER + +E L +L+ +VN+ +IRRT+ +LSKYLPVK E VV +
Sbjct: 425 FEIPILRGRDADASEAERKRGDECLAELLAVVNKFIIRRTNDILSKYLPVKYEHVVFCNL 484
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
Q +LY + S ++ ++G G L +I LKKLCNHPDL + AD
Sbjct: 485 APFQLDLYNYFVASPDIQALLRGK-----GSQPLKAINMLKKLCNHPDL----LDLSAD- 534
Query: 471 FENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
P Y G+ + S K+ VLD MLA I+ T+DKIVL+SNYTQTL
Sbjct: 535 LPGCEQYWPDDYVPKEARGRDRDVKPWYSGKMQVLDRMLARIRADTNDKIVLISNYTQTL 594
Query: 528 DLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGAN 586
DLFERL + R Y +RLDG+M + KR K+V+ FN EF+F+LSSKAGGCGLNLIGAN
Sbjct: 595 DLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFNDPEGEEFVFLLSSKAGGCGLNLIGAN 654
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
RLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVV
Sbjct: 655 RLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVV 714
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLS 704
D EDV RHFS+ LR LF T SDTHD KC RC +G Q +K ++ D S
Sbjct: 715 DSAEDVERHFSLDSLRELFTYRGGTKSDTHDTFKCKRCKPDGRQYIK---AQAMLYGDTS 771
Query: 705 CWHH 708
W+H
Sbjct: 772 TWNH 775
>gi|336467451|gb|EGO55615.1| hypothetical protein NEUTE1DRAFT_86106 [Neurospora tetrasperma FGSC
2508]
gi|350287905|gb|EGZ69141.1| hypothetical protein NEUTE2DRAFT_115349 [Neurospora tetrasperma
FGSC 2509]
Length = 835
Score = 629 bits (1623), Expect = e-177, Method: Compositional matrix adjust.
Identities = 345/688 (50%), Positives = 436/688 (63%), Gaps = 61/688 (8%)
Query: 69 QILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP---- 117
Q+ K F VP++N Y+ LG+R +GA K LHDP A+VLY P
Sbjct: 108 QVFRKAFSVPLINKNTTAYNPNRPPPTLGLR-QGAVFVAKPLHDPCDEFAIVLYDPTVDD 166
Query: 118 -PQLSA--------------------HDLL--------KIDKDKIQVHVVVDPVLSNILR 148
P+ +A H L K++ + +V VV+DP L+ +LR
Sbjct: 167 KPKDTAPKAIEEKKEEPEVKVDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLR 226
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGV+FMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I K
Sbjct: 227 PHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQK 286
Query: 208 AIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+ PSSLV+NW NE+ KWLG + IDG SK E+ +L + GR P++
Sbjct: 287 AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVI 346
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQND
Sbjct: 347 IVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQND 406
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYF+L+ F N +LGT EFRK++E PILRG+D+ AS+AER + +E L +L+ IVN+
Sbjct: 407 LSEYFALISFANPDLLGTRLEFRKRFEIPILRGRDADASEAERKRGDECLVELLAIVNKF 466
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY + S ++ ++G G L
Sbjct: 467 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGK-----GSQPLK 521
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL + AD P Y G+ + S K+ VL
Sbjct: 522 AINILKKLCNHPDL----LDLSAD-LPGCEQYWPEDYVPKEARGRDRDVKPWYSGKMQVL 576
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+ FN
Sbjct: 577 DRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFND 636
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 637 PEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 696
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LF T SDTHD KC
Sbjct: 697 IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFTYRPGTKSDTHDTFKC 756
Query: 682 SRC-VNGIQVKPPPLESDCTDDLSCWHH 708
RC +G Q ++ D S W+H
Sbjct: 757 KRCKPDGRQYMKA--QAMLYGDTSTWNH 782
>gi|384485625|gb|EIE77805.1| hypothetical protein RO3G_02509 [Rhizopus delemar RA 99-880]
Length = 752
Score = 629 bits (1621), Expect = e-177, Method: Compositional matrix adjust.
Identities = 330/652 (50%), Positives = 427/652 (65%), Gaps = 47/652 (7%)
Query: 70 ILAKPFKVPILNYTGGGYST--------KALGVRREGAR--KALHDPTAPNALVLYTPPQ 119
+L K FK+P + G +T K+LG+R+ +AL+D TA +A+VL+ P +
Sbjct: 102 VLTKKFKIPTIQNNNGQAATFSSDIGSRKSLGMRKRAGHLMRALYDHTAEDAVVLWDPDK 161
Query: 120 LSAHDLLKIDKDKIQV-------------------HVVVDPVLSNILRPHQREGVKFMYE 160
+ LKI DK + HVVVDPVL +LRPHQ EGVKF+Y+
Sbjct: 162 DYVQEELKITTDKPKPKQKSLADILGLKKEEKKLGHVVVDPVLGRVLRPHQVEGVKFLYQ 221
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG-PLAKPLIDKAIIVAPSSLVKN 219
C TG DA GCIMADEMGLGKTLQCI L+WTLL+Q + KP I+KAI+ PSSLVKN
Sbjct: 222 CTTGKVHPDAAGCIMADEMGLGKTLQCIALVWTLLQQSEAIGKPTINKAIVTCPSSLVKN 281
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W NE KWLG RV L +D G E + + G+ VNPIL+ISYE+ R+++
Sbjct: 282 WANEFVKWLGENRVRPLVVDSGGTKEKVAAVKRWGAAQGQ-IVNPILIISYESLRTYSKY 340
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
L K+ +G++LCDEGHRLKN ES +Q L L +RV+LSGTPIQNDL EY+SL+ F N
Sbjct: 341 LRKSPIGMLLCDEGHRLKNSESLLFQELNSLPVTKRVILSGTPIQNDLSEYYSLLDFANP 400
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LGT EFR+ YE PILRG+D+ AS+ ER ++E++ + IV+R IRRT+ +LSKYL
Sbjct: 401 GLLGTPSEFRRNYENPILRGRDADASEKERQVSDEKVAEFWKIVSRFTIRRTNDILSKYL 460
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E VV K+ LQ+ LY + S ++ ++G G L +IT LKKLCNHP
Sbjct: 461 PTKYEHVVFCKLAPLQEALYNVFLTSPEIKTLLRGQ-----GSQPLKAITLLKKLCNHPS 515
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ + E ++LP Y + S K+ S K V+ MLA IK T DKIV
Sbjct: 516 LL-----NLPNDLEGCESVLPPNY---HNSNKIEQSFSGKFAVMARMLAKIKKETKDKIV 567
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGG 577
L+SNYTQTLDLFE + + Y +RLDGSMTI KR K+V+ FN EF+F+LSSKAGG
Sbjct: 568 LISNYTQTLDLFEAYCQEQQYGVLRLDGSMTIPKRQKLVDRFNDPEGGEFVFLLSSKAGG 627
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
CGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK C++YRF++ G+IEEK+ QRQ+H
Sbjct: 628 CGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCYIYRFIAAGTIEEKIFQRQSH 687
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
K++LS+CVVD E D+ RHFS++++R LFQ + +THD KC RC+ G Q
Sbjct: 688 KQSLSNCVVD-EADMERHFSLADMRQLFQYNSKSECETHDTFKCKRCIQGKQ 738
>gi|395333479|gb|EJF65856.1| DNA repair protein, SNF2 family [Dichomitus squalens LYAD-421 SS1]
Length = 813
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 353/701 (50%), Positives = 451/701 (64%), Gaps = 69/701 (9%)
Query: 88 STKALGVRREG--ARKALHDPTAPNALVLYTP---------------------------- 117
S ALG+R + LHDP A +A+VLY P
Sbjct: 121 SNAALGIRPLANIIPRPLHDPMADHAIVLYDPTIDDRETDEERREREKEEAKERALKEAQ 180
Query: 118 --------PQLSAHDLLKIDKDKIQVHVV---VDPVLSNILRPHQREGVKFMYECVTGVR 166
P S +LL KDK +V V +DP LS +LRPHQ EGVKF+Y C TG+
Sbjct: 181 EKCAGMYNPHKSLKELLGGGKDKKKVDKVPVVIDPRLSKVLRPHQVEGVKFLYRCTTGMV 240
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEIT 225
+E+ YGCIMADEMGLGKTLQCI LMWTLL+Q P + IDK II PSSLVKNW NE+
Sbjct: 241 VENQYGCIMADEMGLGKTLQCIALMWTLLKQSPHPGRCTIDKCIIACPSSLVKNWANELV 300
Query: 226 KWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
KWLG +AAL IDG G K E+ K+ ++ GR P++++SYET R+ + L
Sbjct: 301 KWLGKDAIAALAIDGKGGKTEMLEKVARWVAASGRNVTQPVMIVSYETLRTLTAHLANCT 360
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
+GL+LCDEGHRLKN ESQT+QAL L KRRV+LSGTPIQNDL EYFSL++F N LG+
Sbjct: 361 IGLLLCDEGHRLKNSESQTFQALNSLNVKRRVILSGTPIQNDLSEYFSLLNFANPNFLGS 420
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
+FRK +E I+RG+D+ A+DA + + ++L++L GIV + +IRRT+ LLSKYLPVK E
Sbjct: 421 KNDFRKNFENAIIRGRDADATDAVKAECEKKLKELGGIVAKFIIRRTNDLLSKYLPVKYE 480
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVV + ++LQ LY I S ++ ++G ++ L +I LKKLCNHP+L
Sbjct: 481 QVVFCRPSELQLSLYRLFISSPEIQALLRGKDSQ-----PLKAINILKKLCNHPEL---- 531
Query: 464 IQTGADGFENAMNILPTGYAASYKSGK-------LLIELSAKLMVLDTMLAVIKMTTDDK 516
+ D + +LP Y+ + S + + E S K +VL+ L I T+DK
Sbjct: 532 LDLPGD-LRGSEKLLPEDYSGAGSSSRDKGRNQIIHCEWSGKFLVLERFLHRIHTETNDK 590
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKA 575
IVL+SNYTQTLDLFE+L + + Y Y RLDG+MTI KR K+V+ FN S EFIF+LSSKA
Sbjct: 591 IVLISNYTQTLDLFEKLLRSKKYGYFRLDGTMTINKRQKLVDQFNDPSGKEFIFLLSSKA 650
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QRQ
Sbjct: 651 GGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQ 710
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPP 694
A+K++LSS VVD +EDV RHFS+ LR LF ENT+ +TH+ KC RC NG Q +K P
Sbjct: 711 ANKQSLSSAVVDEKEDVERHFSLDSLRKLFLFNENTLCETHETFKCKRCKNGRQFMKAPA 770
Query: 695 LESDCTDDLSCWHHVT--EKRWLVDPILKHCWGAG-VSFVF 732
L D S W+H T E + D +L+ G+ VSFVF
Sbjct: 771 L---LYGDASTWNHFTNGELKNNHDDLLRAEVGSPEVSFVF 808
>gi|340518611|gb|EGR48851.1| hypothetical protein TRIREDRAFT_121506 [Trichoderma reesei QM6a]
Length = 1109
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 340/685 (49%), Positives = 433/685 (63%), Gaps = 59/685 (8%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRRE--GARKALHDPTAPNALVLYTP------ 117
+ K F VP+ + + Y LG+RR K LHDP+ A+VLY P
Sbjct: 406 VFRKAFSVPLKDKSQATYDASRPPPTLGLRRGVVFVPKPLHDPSGEFAIVLYDPTVDAKP 465
Query: 118 ------PQLSAHDLLKID-------------------KDKIQVHVVVDPVLSNILRPHQR 152
P + + KID +D +V VV+DP ++ LRPHQ
Sbjct: 466 VVAKENPVQTQAEPSKIDSPIVHKSLAEILGIKKQVEEDHPKVPVVIDPKIAKCLRPHQI 525
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIV 211
EGVKFMY+CVTG+ E A+GCIMADEMGLGKTLQCITLMWTLL+Q P A K I KAI+V
Sbjct: 526 EGVKFMYKCVTGLVDEKAHGCIMADEMGLGKTLQCITLMWTLLKQSPNAGKSTIQKAIVV 585
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
P+SLVKNW NE+TKWLG + IDG K E+ +L + GR P++++SY
Sbjct: 586 CPASLVKNWANELTKWLGPNAINPFAIDGKAPKEELKRQLRQWAIASGRSITRPVIIVSY 645
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R + L ++GL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQNDL EY
Sbjct: 646 ETLRLNVEELKHTKIGLLFCDEGHRLKNADSNTFNALNDLNVSRRVILTGTPIQNDLTEY 705
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
F+L F N +LG+ EFRK++E PILRG+D+ A++ ER + +E +L+ +VN+ LIRR
Sbjct: 706 FALTSFANPDLLGSRLEFRKRFEIPILRGRDADATEEERRRGDECTGELLSVVNKFLIRR 765
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L +I
Sbjct: 766 TNDILSKYLPVKYEHVVFCNLAPFQIDLYNYFITSPDIQALLRGK-----GSQPLKAINI 820
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTML 506
LKKLCNHPDL+ +D + P Y G+ + S K+ VLD ML
Sbjct: 821 LKKLCNHPDLL-----NLSDDLPGSEKCFPDDYVPKEARGRDRDIKPWYSGKMQVLDRML 875
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSN 565
A I+ T+DKIVL+SNYT TLDLFERL + R Y +RLDG+M + KR K+V+ FN +
Sbjct: 876 AKIREDTNDKIVLISNYTSTLDLFERLCRDRQYGCLRLDGTMNVNKRQKLVDRFNDPNGD 935
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
EFIF+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG
Sbjct: 936 EFIFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATG 995
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC- 684
+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ +T SDTHD KC RC
Sbjct: 996 TIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYRPDTTSDTHDTFKCKRCK 1055
Query: 685 VNGIQ-VKPPPLESDCTDDLSCWHH 708
+G Q VK P + D S W+H
Sbjct: 1056 PDGRQFVKSPAM---LYGDTSTWNH 1077
>gi|400592549|gb|EJP60713.1| DNA repair protein, SNF2 family [Beauveria bassiana ARSEF 2860]
Length = 721
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 347/717 (48%), Positives = 451/717 (62%), Gaps = 68/717 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTPP----- 118
+ K F +P+ + + YS+ LG+RR K LHDP+ A+VLY P
Sbjct: 14 VFRKAFSLPLKDKSSAHYSSSRPPPTLGLRRGAVFVAKPLHDPSGEFAIVLYDPTIDDKP 73
Query: 119 -------------------QLSA---HDLLK--------IDKDKIQVHVVVDPVLSNILR 148
QL + H L ++K+ +V VV+DP L+ ILR
Sbjct: 74 KAVEQPAPVDENEQQENIRQLDSPLVHKSLTEILGIKKTVEKEHPRVPVVLDPRLTKILR 133
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CV+G+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I K
Sbjct: 134 PHQVEGVKFMYRCVSGLIDTKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKPTIQK 193
Query: 208 AIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+V P+SLVKNW NE+ KWLG + IDG SK E+ +L + GR P++
Sbjct: 194 AIVVCPASLVKNWANELIKWLGANAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVI 253
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQND
Sbjct: 254 IVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNTFNALNNLNVSRRVILTGTPIQND 313
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL F N +LG+ EFRK++E PILRG+D+ AS+ ++ + + +L+GIVN+
Sbjct: 314 LTEYFSLTSFANPELLGSRLEFRKRFEIPILRGRDADASEEDKQRGDACTTELLGIVNKF 373
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
LIRRT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L
Sbjct: 374 LIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLK 428
Query: 446 SITSLKKLCNHPDL-VMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMV 501
+I LKKLCNHPDL V+D+ G++ P+ Y G+ + S K+ V
Sbjct: 429 AINILKKLCNHPDLLVLDEDLPGSE------YCFPSDYIPKEARGRDREVKPWYSGKMQV 482
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
LD MLA I+ T+DKIVL+SNYT TLDLFE+L + R Y +RLDG+M + KR K+V+ FN
Sbjct: 483 LDRMLARIRQDTNDKIVLISNYTSTLDLFEKLCRSRQYGCLRLDGTMNVNKRQKLVDRFN 542
Query: 562 K-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
+EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYR
Sbjct: 543 DPEGDEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYR 602
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
F++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS LR LFQ +T SDTHD +
Sbjct: 603 FIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSRDSLRELFQYRSDTRSDTHDTFR 662
Query: 681 CSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RWLVDPILKHCWGA-GVSFVF 732
C RC +G Q +K P L D S W+H T + + D +L+ +G VS VF
Sbjct: 663 CKRCRPDGTQYIKAPAL---LYGDTSTWNHFTNDGLKPIQDLLLRQEYGEHDVSAVF 716
>gi|346326947|gb|EGX96543.1| DNA repair and recombination protein RAD54 [Cordyceps militaris
CM01]
Length = 844
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 342/691 (49%), Positives = 437/691 (63%), Gaps = 63/691 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA--RKALHDPTAPNALVLYTPP----- 118
+ K F VP+ + + YS LG+RR K LHDP+ A+VLY P
Sbjct: 54 VFRKAFCVPLKDKSSAHYSPNRPPPTLGLRRGAVFVAKPLHDPSGEFAIVLYDPTIDDRP 113
Query: 119 ----QLSAHD----------------------LLKIDK----DKIQVHVVVDPVLSNILR 148
+LS+ D +L I K + +V VV+DP L+ +LR
Sbjct: 114 NGAERLSSADRNQELRNSQKSDPPLIHKSLAEILGIKKTVENEHPRVPVVLDPKLAGVLR 173
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGVKFMY CV G+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A KP I K
Sbjct: 174 PHQVEGVKFMYRCVAGLIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKPTIQK 233
Query: 208 AIIVAPSSLVKNWCNEITKWLGGR-VAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+V P+SLVKNW NE+TKWLG + IDG SK E+ +L + GR P++
Sbjct: 234 AIVVCPASLVKNWANELTKWLGANAINPFAIDGKSSKEELTRQLRQWAIASGRSVTRPVI 293
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L ++GL+ CDEGHRLKN +S T+ AL L RRV+L+GTPIQND
Sbjct: 294 IVSYETLRLNVEELKHTKIGLLFCDEGHRLKNGDSNTFNALNNLNVSRRVILTGTPIQND 353
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYFSL F N +LG+ +FRK++E PILRG+D+ AS+ ++ + + +L+ IVN+
Sbjct: 354 LTEYFSLTSFANPDLLGSRLDFRKRFEIPILRGRDADASEKDKERGDACTSELLAIVNKF 413
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
LIRRT+ +LSKYLPVK E VV + Q +LY I S ++ ++G G L
Sbjct: 414 LIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLK 468
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL + G D + + P Y G+ + S K+ VL
Sbjct: 469 AINMLKKLCNHPDL----LNLGED-LPGSEDCFPKDYVPKEARGRDREIKPWYSGKMQVL 523
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYT TLDLFE+L + R Y +RLDG+M + KR K+V+ FN
Sbjct: 524 DRMLARIRRDTNDKIVLISNYTSTLDLFEKLCRSRQYGSLRLDGTMNVNKRQKLVDRFND 583
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 584 PEGDEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRF 643
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ NT SDTHD KC
Sbjct: 644 IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVQRHFSLDGLRELFQYRSNTRSDTHDTFKC 703
Query: 682 SRC-VNGIQ-VKPPPLESDCTDDLSCWHHVT 710
RC +G Q +K P L D S W+H T
Sbjct: 704 RRCRPDGNQYIKAPAL---LYGDTSTWNHFT 731
>gi|358371330|dbj|GAA87938.1| SNF2 family N-terminal domain protein [Aspergillus kawachii IFO
4308]
Length = 778
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 336/659 (50%), Positives = 431/659 (65%), Gaps = 44/659 (6%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP------PQL-------S 121
FK+P++N + Y++ A + D P + T P+L S
Sbjct: 103 FKIPLINKSSDAYNSS------RPAPTLVDDVNEPESKEEATADAEEQKPKLDEPLVHKS 156
Query: 122 AHDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADE 178
D+L + K + +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ ++A GCIMAD
Sbjct: 157 LADILGLKKKTEGRPKVPVVIDPRLAKVLRPHQVEGVKFLYRCTTGMVDKNANGCIMADG 216
Query: 179 MGLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALP 236
MGLGKTLQCI+LMWTLL+Q P A I K II PSSLV NW NE+ KWLG +
Sbjct: 217 MGLGKTLQCISLMWTLLKQSPEAGVTTIQKCIIACPSSLVGNWANELVKWLGKDAITPFA 276
Query: 237 IDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
+DG SK E+ +++ + GR V P+L+ISYET R + L + +GL+LCDEGHRL
Sbjct: 277 VDGKASKTELISQMKQWAIASGRSIVRPVLIISYETLRLYVDTLRDSPIGLLLCDEGHRL 336
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN ES T+ AL GL +RRV+LSGTPIQNDL EYF+L+HF N +LG+ EFRK++E PI
Sbjct: 337 KNKESLTWTALNGLNVQRRVILSGTPIQNDLSEYFALLHFANPNLLGSQNEFRKRFELPI 396
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
LRG+D+ ++ + K +ERL +L IVN+ +IRRT+ +LSKYLPVK E VV M++ Q
Sbjct: 397 LRGRDAAGTEEDLKKGDERLAELSSIVNKFIIRRTNDILSKYLPVKYEHVVFCNMSEFQL 456
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAM 475
LY + I+S ++ ++G G L +I LKKLCNHPDL+ + G E
Sbjct: 457 GLYKHFIQSPEIKSLLRGK-----GSQPLKAIGLLKKLCNHPDLL--NLSNDLPGCEYT- 508
Query: 476 NILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
P Y G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFE+
Sbjct: 509 --FPEDYVPPEARGRDRDIKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFEK 566
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L + RGY +RLDG+MT+ KR K+V+ FN EF+F+LSSKAGGCGLNLIGANRLV+F
Sbjct: 567 LCRTRGYGSLRLDGTMTVGKRQKLVDKFNNPDGEEFVFLLSSKAGGCGLNLIGANRLVLF 626
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK++LSSCVVD ED
Sbjct: 627 DPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQSLSSCVVDSAED 686
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
V RHFS+ LR LFQ + T SDTHD KC RC G Q +K P + D S W+H
Sbjct: 687 VERHFSLESLRELFQFKPETRSDTHDTFKCKRCRPEGTQYIKAPAM---LYGDTSTWNH 742
>gi|393232942|gb|EJD40518.1| SNF2 family domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 821
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 343/697 (49%), Positives = 443/697 (63%), Gaps = 60/697 (8%)
Query: 91 ALGVRREGA--RKALHDPTAPNALVLYTP------------------------------- 117
ALG+R + + LHDP A A+VLY P
Sbjct: 125 ALGIRPQAVLIPRPLHDPFADLAIVLYDPTIDERETDEERLARLKEEEREKERKEAEEKC 184
Query: 118 -----PQLSAHDLLKIDKDK----IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
P S LL DK K +V VV+DPVLS ILRPHQ EGVKF+Y+C +G+ +E
Sbjct: 185 AGMWNPHKSLRQLLGEDKKKEVKSQKVPVVIDPVLSAILRPHQVEGVKFLYKCTSGMMVE 244
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKW 227
+ YGCIMAD MGLGKTLQCITL+WTLL+Q P A KP I+K II PSSLVKNW NE TKW
Sbjct: 245 NQYGCIMADAMGLGKTLQCITLLWTLLKQSPHAGKPTIEKCIIACPSSLVKNWANEFTKW 304
Query: 228 LG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
LG G V L +DG G+KA++ + ++ GR P++++SYET RS + L +G
Sbjct: 305 LGEGTVPCLAVDGKGTKADLIANVQRWVAASGRNVTLPVMIVSYETLRSLGAWLANATIG 364
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L+LCDEGHRLKN +S T++AL L KRRV+LSGTPIQNDL EYFSL++F N LG+
Sbjct: 365 LLLCDEGHRLKNSDSLTFKALNSLNVKRRVILSGTPIQNDLSEYFSLLNFANPDFLGSKA 424
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
+F+K +E I+RG+D+ A+D E+ K+ +L++L +V+R +IRR + LLSKYLPVK EQV
Sbjct: 425 DFKKNFENAIIRGRDADATDGEKEKSEAKLKELGALVSRFIIRRANDLLSKYLPVKYEQV 484
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MDKI 464
V + + Q LY I S +++ ++G +G L +I LKKLCNHP+L+ + K
Sbjct: 485 VFCQPSPFQVALYKLFISSPEIKKLLRG-----VGSQPLKAINILKKLCNHPELLDLPKD 539
Query: 465 QTGADGF-----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
G+D A + +L + K VL+ L I+ T+DKIVL
Sbjct: 540 LHGSDELIPEGFVGAGGDAGGFGGGRRERRELRCDWGGKFAVLERFLHRIRTETNDKIVL 599
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGC 578
+SNYTQTL+LFERL + +GY + RLDGSM++ KR K+V+ FN EFIF+LSSKAGGC
Sbjct: 600 ISNYTQTLELFERLCRDKGYGFFRLDGSMSVIKRQKLVDQFNNPEGKEFIFLLSSKAGGC 659
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGANRL++FDPDWNPA D QA+ARVWRDGQ K CFVYRF+S+G+IEEK+ QRQA K
Sbjct: 660 GINLIGANRLILFDPDWNPAADQQALARVWRDGQTKECFVYRFISSGTIEEKIFQRQASK 719
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESD 698
+ALSSCVVD +ED RHFS+ LR LF +EN I +THD KC RC N V P +
Sbjct: 720 QALSSCVVDEKEDAERHFSLDALRQLFMFQENAICETHDTFKCQRCKNPGLVNPSEKRAM 779
Query: 699 CTDDLSCWHHVTEKRWLV--DPILKHCWGA-GVSFVF 732
D S W+H T ++ D +L+ G GVSFVF
Sbjct: 780 LYGDGSTWNHYTNEQLKGNHDDLLRAEVGVPGVSFVF 816
>gi|407929790|gb|EKG22600.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 831
Score = 626 bits (1615), Expect = e-176, Method: Compositional matrix adjust.
Identities = 342/684 (50%), Positives = 436/684 (63%), Gaps = 64/684 (9%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGA---RKALHDPTAPNALVLYTP---------- 117
F VP+L Y+ LG+R +GA + LHDPT A+VLY P
Sbjct: 126 FSVPLLKKDVDAYNPNRPAPLLGMR-QGAVFVARPLHDPTGEFAIVLYDPTVDDKPTPVE 184
Query: 118 --------------PQL-------SAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQRE 153
P+L S D+L + K + +V VV+DP L+ +LRPHQ E
Sbjct: 185 EDKDKDKKEDEQEKPKLDEPIVHKSLADILGLKKKVEGRPRVPVVIDPRLAKVLRPHQVE 244
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVA 212
GVKF+Y C TG+ A GCIMADEMGLGKTLQCI LMWTLLRQ P A KP I K +I
Sbjct: 245 GVKFLYRCTTGLVDPKANGCIMADEMGLGKTLQCIALMWTLLRQSPDAGKPTIQKCVIAC 304
Query: 213 PSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYE 270
PSSLVKNW NE+ KWLG + +DG SK E+ +L + GR V P+L++SYE
Sbjct: 305 PSSLVKNWANELVKWLGKDAINPFAVDGKASKEELIQQLRQWSIASGRAVVRPVLIVSYE 364
Query: 271 TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
T R + L +GL+LCDEGHRLKN ES T+ AL L ++RV+LSGTPIQNDL EYF
Sbjct: 365 TLRLYVDELKSTPIGLLLCDEGHRLKNDESLTFTALNNLNVQKRVILSGTPIQNDLSEYF 424
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT 390
+L++F N LGT +FRK+YE PILRG+D+ +D +R +ERL +L+ +VN+ +IRRT
Sbjct: 425 ALLNFANPNYLGTKNDFRKRYELPILRGRDADGTDEDRKLGDERLSELLTLVNKFIIRRT 484
Query: 391 SALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSL 450
+ +LSKYLP K E VV + Q++LY IKS +++ ++G G L +I L
Sbjct: 485 NDILSKYLPRKYEHVVFCNLAPFQRDLYNLFIKSPEIQQLLRGK-----GSQPLKAINIL 539
Query: 451 KKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLA 507
KKLCNHPDL+ + G E+ P + G+ + S K+ VLD MLA
Sbjct: 540 KKLCNHPDLL--DLPGDLPGSESC---FPDDFVPKDARGRDRDVKSWYSGKMAVLDRMLA 594
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-E 566
I+ T+DKIVL+SNYTQTLD+FE+L + R Y +RLDG+M + KR K+V+ FN E
Sbjct: 595 RIRQDTNDKIVLISNYTQTLDVFEKLCRSRSYGCLRLDGTMNVNKRQKLVDKFNDPEGPE 654
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF+ TG+
Sbjct: 655 FVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIGTGT 714
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-V 685
IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + NT SDTHD KC RC
Sbjct: 715 IEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQYQPNTTSDTHDTFKCKRCRS 774
Query: 686 NGIQ-VKPPPLESDCTDDLSCWHH 708
+G Q +K P + D S W+H
Sbjct: 775 DGNQHIKAPAM---LYGDTSTWNH 795
>gi|409082253|gb|EKM82611.1| hypothetical protein AGABI1DRAFT_118061 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 820
Score = 624 bits (1608), Expect = e-176, Method: Compositional matrix adjust.
Identities = 347/726 (47%), Positives = 457/726 (62%), Gaps = 75/726 (10%)
Query: 69 QILAKPFKVPILNYTGGGY-----STKALGVR--REGARKALHDPTAPNALVLYTP---- 117
Q++ + F +P + G + S +LG+R + + LHDP +A+VL+ P
Sbjct: 103 QVINRRFSLPSMQSKDGSFLMPVLSNISLGIRPLAKVIPRPLHDPMEDHAIVLFDPTVDD 162
Query: 118 --------------------------------PQLSAHDLLKID--KDKI-QVHVVVDPV 142
P S LL K+K +V VV+DP
Sbjct: 163 RETDEEKKEREAEEAKAKAEEEARTKTIGMYNPHKSLRKLLGEGGPKEKTPKVPVVIDPR 222
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA- 201
LS +LRPHQ EGV+F+Y+C TG+ +++ YGCIMADEMGLGKTLQCI LMWTLL+Q P A
Sbjct: 223 LSKVLRPHQVEGVQFLYKCTTGMIVDNQYGCIMADEMGLGKTLQCIALMWTLLKQSPHAG 282
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRR 259
KP I+K IIV PSSLVKNW NE+ KWLG V L +D G KAE+ KL ++ GR
Sbjct: 283 KPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKLQRWVSARGRN 342
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
P+++ISYET RS + L +GL+LCDEGHRLKN ++QT+QAL L KRRV+L+G
Sbjct: 343 VTQPVMIISYETLRSVTAHLASCTIGLLLCDEGHRLKNSDNQTFQALTSLDVKRRVILTG 402
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TP+QNDL EYFSL++F N LG+ +FRK +E I+RG+D+ ASD + ++ ++L++L
Sbjct: 403 TPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDALASDENKAQSEKKLKELG 462
Query: 380 GIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
+V + +IRRT+ LLSKYLPVK E VV ++D Q LY I S ++ ++G E+
Sbjct: 463 SLVMKFIIRRTNDLLSKYLPVKYEHVVFCHLSDFQLSLYRLFITSPDIKALLRGTESQ-- 520
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY--------KSGKL 491
L +I LKKLCNHPDL+ + + G EN +LP Y + ++ +
Sbjct: 521 ---PLKAINLLKKLCNHPDLL--DLPSELKGSEN---LLPPDYTGTKGGGGRGGDRNPAV 572
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
E K +VL+ L I+ ++DKIVL+SNYTQTLDLFERL + + Y + RLDG MTI
Sbjct: 573 RSEWGGKFIVLERFLHRIRAESNDKIVLISNYTQTLDLFERLCRNKKYGFFRLDGKMTIN 632
Query: 552 KRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRD
Sbjct: 633 KRQKLVDQFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRD 692
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQKK CFVYRF+STG+IEEK+ QRQA+K+ALSS VVD +ED RHFS+ LR LF E
Sbjct: 693 GQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDTERHFSVDALRQLFTFNEK 752
Query: 671 TISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-A 726
T+ DTH+ KC RC +G Q +K P L D S W+H T E + D +L+ G
Sbjct: 753 TLCDTHETFKCKRCKDGKQIIKSPAL---LYGDASTWNHFTNGELKNNHDDLLRAEVGLP 809
Query: 727 GVSFVF 732
+SFVF
Sbjct: 810 DISFVF 815
>gi|402223361|gb|EJU03425.1| DNA repair protein SNF2 family [Dacryopinax sp. DJM-731 SS1]
Length = 831
Score = 623 bits (1607), Expect = e-175, Method: Compositional matrix adjust.
Identities = 355/743 (47%), Positives = 460/743 (61%), Gaps = 93/743 (12%)
Query: 69 QILAKPFKVPILNYTGGGY-----STKALGV--RREGARKALHDPTAPNALVLYTPP--- 118
Q+L++ F +P L + G S ALG+ + + LHDP + +A+VLY P
Sbjct: 98 QVLSRSFTIPKLFNSQGELVPTIASRAALGLLTPKTIPPRPLHDPMSDHAIVLYDPTVDD 157
Query: 119 ---------QLSAHD----------------LLKI-----------------DKDKIQVH 136
+L+A + LL I K + +V
Sbjct: 158 RETDEERRERLAAEEKVRQEKEAEEKSKEDGLLNIHGKSLREVLGLKMPGEEKKKEDKVP 217
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
VV+DPVL +LRPHQ EGVKF+Y+C TG +E+AYGCIMADEMGLGKTLQCI LM TLL+
Sbjct: 218 VVIDPVLGKVLRPHQVEGVKFLYKCTTGAIVENAYGCIMADEMGLGKTLQCIALMHTLLK 277
Query: 197 QGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG--GRVAALPIDG-GSKAEIDNKLNSF 252
Q P A KP IDKAII PSSLVKNW NE+ KWLG G L +D G+KAE+ + +
Sbjct: 278 QSPRAQKPTIDKAIIACPSSLVKNWGNELVKWLGKDGAPGILSVDNKGTKAELIESVKRW 337
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+ GR P++++SYET R+ + L E+GL+LCDEGHRLKN +S T+QAL GLK +
Sbjct: 338 VAAGGRNVTQPVMIVSYETLRTLCAELMNCEIGLLLCDEGHRLKNSDSLTFQALNGLKVQ 397
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RRV+LSGTPIQNDL EYFSL++F N LG+ EFRK +E ILRG+D+ A+D E+ +
Sbjct: 398 RRVILSGTPIQNDLSEYFSLLNFANPDYLGSRMEFRKNFELAILRGRDADATDKEKENSE 457
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+L++L V++ +IRRT+ LLSKYLPVK E VV ++ LQ LY + IKS +R ++
Sbjct: 458 AKLKELAERVSKFIIRRTNDLLSKYLPVKYEHVVFCTLSPLQLALYRHFIKSPETQRLLR 517
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSG-- 489
G G L +I LKKLCNHP+L+ + + G D ++LP Y S G
Sbjct: 518 GQ-----GSQPLKAINLLKKLCNHPELLNLPEDLPGCD------SVLPPEYGNSLYGGPK 566
Query: 490 ---------------KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
+ E K +VL+ L IK T+DKIVL+SNYTQTLDLFE++
Sbjct: 567 VSRAERGARDRGMGEDVRCEWGGKFLVLERFLDRIKRETNDKIVLISNYTQTLDLFEKMC 626
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ + Y + RLDG+M++ KR K+V+ FN EF+F+LSSKAGGCG+NLIGANRL++FDP
Sbjct: 627 RSKRYGFFRLDGTMSVVKRQKLVDQFNDPEGKEFVFLLSSKAGGCGINLIGANRLILFDP 686
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QRQA K+ALSSCVVD +ED
Sbjct: 687 DWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSSCVVDEKEDAE 746
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHV--T 710
RHFS +LR LF ++NT +THD KC RC G Q +K P L D S W+H
Sbjct: 747 RHFSADDLRKLFLFKDNTHCETHDTFKCKRCKEGKQFIKAPAL---LYGDASTWNHYQNA 803
Query: 711 EKRWLVDPILK-HCWGAGVSFVF 732
E L D +L+ C VS VF
Sbjct: 804 ELTKLHDDLLRAECGEPQVSTVF 826
>gi|426200084|gb|EKV50008.1| hypothetical protein AGABI2DRAFT_183150 [Agaricus bisporus var.
bisporus H97]
Length = 820
Score = 623 bits (1606), Expect = e-175, Method: Compositional matrix adjust.
Identities = 346/726 (47%), Positives = 457/726 (62%), Gaps = 75/726 (10%)
Query: 69 QILAKPFKVPILNYTGGGY-----STKALGVR--REGARKALHDPTAPNALVLYTP---- 117
Q++ + F +P + G + S +LG+R + + LHDP +A+VL+ P
Sbjct: 103 QVINRRFSLPSMQSKDGSFLMPVLSNISLGIRPLAKVIPRPLHDPMEDHAIVLFDPTVDD 162
Query: 118 --------------------------------PQLSAHDLLKID--KDKI-QVHVVVDPV 142
P S LL K+K +V VV+DP
Sbjct: 163 RETDEEKKEREAEEAKAKAEEEVRTKTIGMYNPHKSLRKLLGEGGPKEKTPKVPVVIDPR 222
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA- 201
LS +LRPHQ EGV+F+Y+C TG+ +++ YGCIMADEMGLGKTLQCI LMWTLL+Q P A
Sbjct: 223 LSKVLRPHQVEGVQFLYKCTTGMIVDNQYGCIMADEMGLGKTLQCIALMWTLLKQSPHAG 282
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRR 259
KP I+K IIV PSSLVKNW NE+ KWLG V L +D G KAE+ KL ++ GR
Sbjct: 283 KPTIEKCIIVCPSSLVKNWANELIKWLGKDAVTPLAVDNKGGKAELLPKLQRWVSARGRN 342
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
P+++ISYET RS + L +GL+LCDEGHRLKN ++QT+QAL L KRRV+L+G
Sbjct: 343 VTQPVMIISYETLRSVTAHLASCTIGLLLCDEGHRLKNSDNQTFQALTSLDVKRRVILTG 402
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TP+QNDL EYFSL++F N LG+ +FRK +E I+RG+D+ ASD + ++ ++L++L
Sbjct: 403 TPVQNDLSEYFSLLNFANPNFLGSKNDFRKNFEHAIIRGRDALASDENKAQSEKKLKELG 462
Query: 380 GIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
+V + +IRRT+ LLSKYLPVK E VV ++D Q LY I S ++ ++G E+
Sbjct: 463 SLVMKFIIRRTNDLLSKYLPVKYEHVVFCHLSDFQLSLYRLFITSPDIKALLRGTESQ-- 520
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY--------KSGKL 491
L +I LKKLCNHPDL+ + + G EN +LP Y + ++ +
Sbjct: 521 ---PLKAINLLKKLCNHPDLL--DLPSELKGSEN---LLPPDYTGTKGGGGRGGDRNPAV 572
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
E K +VL+ L I+ ++DKIVL+SNYTQTLDLFE+L + + Y + RLDG MTI
Sbjct: 573 RSEWGGKFIVLERFLHRIRAESNDKIVLISNYTQTLDLFEKLCRNKKYGFFRLDGKMTIN 632
Query: 552 KRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRD
Sbjct: 633 KRQKLVDQFNDPNGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRD 692
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQKK CFVYRF+STG+IEEK+ QRQA+K+ALSS VVD +ED RHFS+ LR LF E
Sbjct: 693 GQKKECFVYRFISTGTIEEKIFQRQANKQALSSAVVDEKEDTERHFSVDALRQLFTFNEK 752
Query: 671 TISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-A 726
T+ DTH+ KC RC +G Q +K P L D S W+H T E + D +L+ G
Sbjct: 753 TLCDTHETFKCKRCKDGKQIIKSPAL---LYGDASTWNHFTNGELKNNHDDLLRAEVGLP 809
Query: 727 GVSFVF 732
+SFVF
Sbjct: 810 DISFVF 815
>gi|336364885|gb|EGN93238.1| hypothetical protein SERLA73DRAFT_172150 [Serpula lacrymans var.
lacrymans S7.3]
gi|336377463|gb|EGO18625.1| hypothetical protein SERLADRAFT_454200 [Serpula lacrymans var.
lacrymans S7.9]
Length = 817
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 344/700 (49%), Positives = 448/700 (64%), Gaps = 71/700 (10%)
Query: 91 ALGVRREGA--RKALHDPTAPNALVLYTP------------------------------- 117
+LG+R + + LHDP +A+VLY P
Sbjct: 126 SLGIRPQAKIFPRPLHDPMQDHAIVLYDPTIDDRETDEEKKEREKEEEKERAAKEAQEKV 185
Query: 118 -----PQLSAHDLLKIDKDKIQ----VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
P S LL KDK Q V VV+DP L+ +LRPHQ EGVKF+Y+C TG+ +E
Sbjct: 186 AGLYNPHRSLRKLLGEGKDKKQKDTKVPVVIDPRLTAVLRPHQVEGVKFLYKCTTGMLME 245
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKW 227
+ YGCIMADEMGLGKTLQCI L+WTLL+Q P K ++K II PSSLVKNW NE KW
Sbjct: 246 NQYGCIMADEMGLGKTLQCIALLWTLLKQSPHPGKSSVEKCIIACPSSLVKNWANEFAKW 305
Query: 228 LG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
LG V+ L IDG G KAE+ K+ ++ GR P++++SYET R+ + L +G
Sbjct: 306 LGKDAVSILAIDGKGGKAELLEKVGRWVTALGRNITQPVMIVSYETLRTLSVHLANCSIG 365
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L+LCDEGHRLKN +S T+QAL GL KRRV+L+GTPIQNDL EYFSL++F N LG+
Sbjct: 366 LLLCDEGHRLKNSDSLTFQALNGLNVKRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKN 425
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EFRK +E I+RG+D+ A+DA + + ++L++L G+V + +IRRT+ LLSKYLPVK EQV
Sbjct: 426 EFRKNFENAIIRGRDANAADAVKAASEKKLKELGGLVTKFIIRRTNDLLSKYLPVKYEQV 485
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
V ++D Q LY I S ++ ++G E+ L +I LKKLCNHP+L+
Sbjct: 486 VFCGLSDFQLSLYRLFILSPEIKALLRGAESQ-----PLKAINILKKLCNHPELL----- 535
Query: 466 TGADGFENAMNILPTGYA-ASYKSGK-------LLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ + N++P G+A A +G+ + + S K +VL+ L I+ T DKI
Sbjct: 536 DLPNDLRGSENLIPEGFACAGTTTGRDRNKKQTVRCDWSGKFLVLERFLHQIRTQTTDKI 595
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAG 576
VL+SNYTQTLDLFE+L + + Y + RLDG+MTI KR K+V+ FN EFIF+LSSKAG
Sbjct: 596 VLISNYTQTLDLFEKLCRSKKYGFFRLDGTMTITKRQKLVDQFNNPEGKEFIFLLSSKAG 655
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QRQA
Sbjct: 656 GCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQA 715
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPL 695
K+ALSS VVD +ED RHFS+ LR LF ENT+ +TH+ KC RC +G Q +K P L
Sbjct: 716 SKQALSSAVVDEKEDAERHFSLDSLRQLFLFNENTLCETHETFKCKRCKDGRQIIKAPAL 775
Query: 696 ESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-AGVSFVF 732
D S W+H T E + D +L+ G +SFVF
Sbjct: 776 ---LYGDASTWNHFTNAELKNNHDDLLRAEVGLPEISFVF 812
>gi|320587436|gb|EFW99916.1| DNA repair and recombination protein rad54 [Grosmannia clavigera
kw1407]
Length = 809
Score = 622 bits (1605), Expect = e-175, Method: Compositional matrix adjust.
Identities = 349/744 (46%), Positives = 458/744 (61%), Gaps = 73/744 (9%)
Query: 26 PVKKEKRSCTSRKPLGSVDNEDEPNS---KLPMTKEEMSEHENL----IRQILAKPFKVP 78
P +K KR K ++ D+P + +L +T E ++ Q K F VP
Sbjct: 50 PTRKRKR--VDYKGADGSEDADKPYTNADRLALTTREANKFPVFRVLDKEQAFRKSFVVP 107
Query: 79 ILNYTGGGYSTK----ALGVR--REGARKALHDPTAPNALVLYTP--------------- 117
+ N Y+ ALG+R R K LHDP+ A+VLY P
Sbjct: 108 LANKNSAAYNPSRPPPALGMRQGRAFVAKPLHDPSGEFAIVLYDPTIDDRPKEGAEAGTA 167
Query: 118 ----------PQL-----SAHDLL----KIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
P+ S ++L K++ ++ +V VV+DP L+ +LRPHQ EGV+FM
Sbjct: 168 EAEATQVVAAPETPLVHKSLAEILGIQKKVEGERPRVPVVIDPRLAKVLRPHQIEGVRFM 227
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLV 217
Y CVTG+ A GCIMADEMGLGKTLQCITL+WTLL+Q P A +P I KAI+ PSSLV
Sbjct: 228 YRCVTGMIDAKANGCIMADEMGLGKTLQCITLLWTLLKQSPEAGRPSIQKAIVACPSSLV 287
Query: 218 KNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
+NW NE+ KWLG + IDG SK ++ +L + GR P++++SYET R +
Sbjct: 288 RNWANELVKWLGADAITPFAIDGKASKEDLTRQLRQWAIASGRAVTRPVIIVSYETLRLN 347
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
L ++GL+LCDEGHRLKN +SQT+ AL L+ RRV+LSGTPIQNDL EYF+L+ F
Sbjct: 348 VEELKHTKIGLMLCDEGHRLKNGDSQTFSALNNLQVSRRVILSGTPIQNDLSEYFALISF 407
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
N +LG+ EFR+++E PILRG+D+ A ER K + L +L+ +VN+ +IRRT+ +LS
Sbjct: 408 ANPDLLGSRLEFRRRFELPILRGRDADAGPDERKKGDACLAELLAVVNKFIIRRTNDILS 467
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN 455
KYLPVK E VV + Q +LY I S ++ ++G G L +I LKKLCN
Sbjct: 468 KYLPVKYEHVVFCNLAPFQLDLYNYFITSPDIQALLRGK-----GSQPLKAINILKKLCN 522
Query: 456 HPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMT 512
HPDL+ AD + P Y A G+ + S K+MVL+ MLA I+
Sbjct: 523 HPDLL-----NLADDLPGSERCCPDDYVAKEARGRDREVKPWYSGKMMVLERMLARIRAE 577
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFML 571
T+DKIVL+SNYT TLDLFERL + R Y +RLDG+M + KR K+V+ FN +EFIF+L
Sbjct: 578 TNDKIVLISNYTSTLDLFERLCRNRAYGCLRLDGTMNVSKRQKLVDRFNDPDGSEFIFLL 637
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+
Sbjct: 638 SSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKI 697
Query: 632 MQRQAHKKALSSCVVDCE--EDVARHFSMSELRSLFQLE--ENTISDTHDKIKCSRC-VN 686
QRQ+HK++LS+CVVD +DV RHFS+ L+ LFQ T SDTHD KC RC +
Sbjct: 698 FQRQSHKQSLSTCVVDAAAGDDVERHFSLDSLKELFQFRGAGTTRSDTHDTFKCKRCRPD 757
Query: 687 GIQVKPPPLESDCTDDLSCWHHVT 710
G Q+ P + D S W+H+T
Sbjct: 758 GRQILKAP--AMLYGDTSTWNHMT 779
>gi|302691444|ref|XP_003035401.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8]
gi|300109097|gb|EFJ00499.1| hypothetical protein SCHCODRAFT_81511 [Schizophyllum commune H4-8]
Length = 842
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 319/635 (50%), Positives = 428/635 (67%), Gaps = 48/635 (7%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
+V VV+DP L +LRPHQ EGVKF+Y C +G+ +E+ YGCIMADEMGLGKTLQCITL+WT
Sbjct: 215 KVPVVIDPRLGKVLRPHQVEGVKFLYRCASGMVMENTYGCIMADEMGLGKTLQCITLLWT 274
Query: 194 LLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGGR--VAALPIDG-GSKAEIDNKL 249
LL+Q P A KP I+K II PSSLV+NW NE+TKWLG ++ L +DG G+KAE+ K+
Sbjct: 275 LLKQSPHAGKPTIEKCIIACPSSLVRNWANELTKWLGKEDTISPLAVDGKGTKAELIEKV 334
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
N ++ GR P++++SYET RS L + +GL+L DEGHRLKN E+QTYQAL L
Sbjct: 335 NRWVSASGRNVTQPVMIVSYETLRSLTDYLAQCPIGLLLADEGHRLKNSENQTYQALASL 394
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RRV+L+GTPIQNDL EY+SL++F N LG+ +FRK YE I+RG+D+ A+D ++
Sbjct: 395 NVRRRVILTGTPIQNDLSEYYSLLNFCNPNFLGSKNDFRKNYENIIIRGRDADATDKDKQ 454
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
++ ++L +L GIV + +IRRT+ LLSKYLPVK EQVV +++ Q LY I S ++
Sbjct: 455 ESEKKLRELTGIVTKFIIRRTNDLLSKYLPVKYEQVVFCGLSEFQLALYRLFITSPEIKS 514
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
++G + L +I LKKLCNHP+L+ + + + +++P G+ + +
Sbjct: 515 LLRGTNSQ-----PLKAINILKKLCNHPELL-----DLPNDLQGSDHLIPEGFCGAGQQQ 564
Query: 490 K---------------------------LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
+ + S K +VL+ L ++ TT DKIVL+SN
Sbjct: 565 GGSGRSGGRSGRGGGGAGGSGSGSGSGQVRCDWSGKFVVLERFLQRMRTTTTDKIVLISN 624
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAGGCGL 580
YTQTLDLFE++ + + Y Y RLDG+MT KR K+V+ FN +N +F+F+LSSKAGGCG+
Sbjct: 625 YTQTLDLFEKMLRGKRYGYFRLDGTMTTTKRQKMVDEFNDPNNTEKFVFLLSSKAGGCGI 684
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QRQA+K+A
Sbjct: 685 NLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQA 744
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT 700
LSS VVD +EDV RHFS+ LR LF+ ENT+ DTHD KC RC NG+Q ++
Sbjct: 745 LSSSVVDEKEDVERHFSIDSLRQLFKFNENTLCDTHDTFKCKRCKNGVQAMKA--QALLY 802
Query: 701 DDLSCWHHVT--EKRWLVDPILKHCWG-AGVSFVF 732
D S W+H T E + D +L+ G VSFVF
Sbjct: 803 GDASTWNHFTNAELKKNHDDLLRAEVGEPEVSFVF 837
>gi|170087336|ref|XP_001874891.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
gi|164650091|gb|EDR14332.1| DNA repair protein, SNF2 family [Laccaria bicolor S238N-H82]
Length = 816
Score = 620 bits (1599), Expect = e-175, Method: Compositional matrix adjust.
Identities = 343/702 (48%), Positives = 446/702 (63%), Gaps = 70/702 (9%)
Query: 88 STKALGVRREGA--RKALHDPTAPNALVLYTP---------------------------- 117
S +LGVR + + LHDP +A+VLY P
Sbjct: 123 SNASLGVRPQAKIIPRPLHDPMEDHAIVLYDPTTDDRETDEERKERLEGEAKEKAAMEAI 182
Query: 118 --------PQLSAHDLL----KIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
P DLL +V VV+DP+L+ +LRPHQ EGVKF+Y+C TG+
Sbjct: 183 EKTAGMYNPHKRLEDLLGEGKDKKPKDKKVPVVIDPLLTKVLRPHQVEGVKFLYKCTTGM 242
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEI 224
+E+ YGCIMADEMGLGKTLQCI L+WTLL+Q P KP I+K II PSSLVKNW NE+
Sbjct: 243 LVENQYGCIMADEMGLGKTLQCIALLWTLLKQSPHPGKPSIEKCIIACPSSLVKNWANEL 302
Query: 225 TKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
KWLG V L IDG G KAE+ ++ ++ GR P++++SYET R+ L
Sbjct: 303 VKWLGKDAVTPLAIDGKGGKAELLERVGRWVAARGRNVTQPVMIVSYETLRTLTVHLAHC 362
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
++GL+LCDEGHRLKN ES T+QAL GL RRV+L+GTPIQNDL EYFSL++F N LG
Sbjct: 363 KIGLLLCDEGHRLKNSESLTFQALNGLDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLG 422
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
+ +FRK +E I+RG+DS ASD + ++ ++L++L +V + +IRRT+ LLSKYLPVK
Sbjct: 423 SKNDFRKNFENAIIRGRDSLASDGVKAESEKKLKELGNLVTKFIIRRTNDLLSKYLPVKY 482
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
EQVV +++ Q LY I S ++ ++G + L +I LKKLCNHP+L+
Sbjct: 483 EQVVFCGLSEFQLSLYRLFIVSPEIKALLRGTTSQ-----PLKAINILKKLCNHPELL-- 535
Query: 463 KIQTGADGFENAMNILPTGYAASY-----KSGKLLI--ELSAKLMVLDTMLAVIKMTTDD 515
D + +++P G++++ K GK + + K +VL+ L IK T D
Sbjct: 536 ---DLPDDLKGCDHLIPEGFSSTAARSRGKGGKQTVRCDWGGKFLVLERFLHQIKTQTTD 592
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSK 574
KIVL+SNYTQTLDLFE+L + + Y + RLDGSMTI KR K+V+ FN EFIF+LSSK
Sbjct: 593 KIVLISNYTQTLDLFEKLCRSKKYGFFRLDGSMTIVKRQKLVDQFNDPDGKEFIFLLSSK 652
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QR
Sbjct: 653 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQR 712
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPP 693
QA+K+ALSS VVD +ED RHFS+ LR LF ENT+ +TH+ KC RC +G Q VK P
Sbjct: 713 QANKQALSSAVVDEKEDAERHFSIDALRQLFTFNENTLCETHETFKCKRCKDGKQIVKAP 772
Query: 694 PLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-AGVSFVF 732
L D S W+H T E + D +L+ G VSFVF
Sbjct: 773 AL---LYGDASTWNHFTNAELKNNHDDLLRAEVGLPEVSFVF 811
>gi|393216995|gb|EJD02485.1| DNA repair protein, SNF2 family [Fomitiporia mediterranea MF3/22]
Length = 814
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 342/728 (46%), Positives = 453/728 (62%), Gaps = 75/728 (10%)
Query: 67 IRQILAKPFKVPILNYTGGG-----YSTKALGVRREGA--RKALHDPTAPNALVLYTP-- 117
+ ++A+ F +P + + G S +LG+R + LHDP +A+VLY P
Sbjct: 95 FQSVVARRFSIPCMTNSKGEIVPTVLSGVSLGIRPLAVLLPRPLHDPMEDHAIVLYDPTI 154
Query: 118 ----------------------------------PQLSAHDLLKIDKDKIQ----VHVVV 139
P S LL D+ K Q V VV+
Sbjct: 155 DYKETDEEKREREKEEEKERLAKEAEEKTKGMFNPHKSLRKLLGEDQKKQQTVQKVAVVL 214
Query: 140 DPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP 199
DP LS +LRPHQ EGVKF+Y C TG+ IE+ YGCIMADEMGLGKTLQCI LM+TLL+Q P
Sbjct: 215 DPKLSKVLRPHQIEGVKFLYRCTTGMTIENQYGCIMADEMGLGKTLQCIALMYTLLKQSP 274
Query: 200 LA-KPLIDKAIIVAPSSLVKNWCNEITKWLGGRV-AALPIDG-GSKAEIDNKLNSFMQTY 256
A +P IDK II PSSLV+NW NE+TKWLG +L +DG G+KAE+ K+ ++
Sbjct: 275 RAVRPTIDKCIIACPSSLVRNWANELTKWLGPEAPGSLAVDGKGTKAELIEKVARWVAAS 334
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
G+ P++++SYET R+ + L +GL+LCDEGHRLKN +S T+QAL L KRRV+
Sbjct: 335 GKTVTQPVMIVSYETLRTLSEYLANCTIGLLLCDEGHRLKNSDSLTFQALNALNVKRRVI 394
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQNDL EYFSL++F N LG+ +FRK +E I+RG+D+ ASD + +L+
Sbjct: 395 LSGTPIQNDLSEYFSLLNFANPNYLGSKGDFRKNFENAIIRGRDADASDQVKAACENKLK 454
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+L +V +IRRT+ LLSKYLPVK E VV ++D Q LY I S ++ ++G +
Sbjct: 455 ELGSMVTPFIIRRTNDLLSKYLPVKYEHVVFCGLSDFQLALYRLFITSPEIKALLRGTNS 514
Query: 437 TKLGMTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGK----- 490
L +I LKKLCNHP+L+ + G++G ++P G+ + ++ +
Sbjct: 515 Q-----PLKAINILKKLCNHPELLDLPNDLQGSEG------LIPEGFVGAGQTARERGRN 563
Query: 491 --LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
+ + K +VL+ L I+ T DKIVL+SNYTQTLDLFE+L + +GY RLDG+M
Sbjct: 564 QGVRCDWGGKFLVLERFLHRIRTETGDKIVLISNYTQTLDLFEKLCRSKGYGCFRLDGTM 623
Query: 549 TIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
T+ KR K+V+ FN + EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARV
Sbjct: 624 TVSKRQKLVDQFNDPNRPEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARV 683
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WRDGQKK CFVYRF+STG+IEEK+ QRQA K+ALSS VVD ED RHFS+ LR LF
Sbjct: 684 WRDGQKKECFVYRFISTGTIEEKIFQRQAQKQALSSAVVDATEDAERHFSVDMLRQLFTF 743
Query: 668 EENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG 725
+ENT DTHD KC RC +G Q+ ++ D S W+H T E + D +L+ G
Sbjct: 744 KENTSCDTHDTFKCKRCKDGKQIIRS--QALLYGDASTWNHYTNPELKNNHDDLLRAEVG 801
Query: 726 -AGVSFVF 732
VSFVF
Sbjct: 802 LPEVSFVF 809
>gi|67969780|dbj|BAE01238.1| unnamed protein product [Macaca fascicularis]
Length = 489
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 307/493 (62%), Positives = 378/493 (76%), Gaps = 11/493 (2%)
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
M G R +PIL+ISYETFR H VL K VGLV+CDEGHRLKN E+QTYQAL L
Sbjct: 1 MNQRGARVPSPILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTS 60
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RRVL+SGTPIQNDLLEYFSLVHFVN GILGTA EF+K +E PIL+G+D+ AS+A+R
Sbjct: 61 RRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRKLGE 120
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
ERL +L IVNRCLIRRTS +LSKYLPVK EQVVC ++T LQ ELY ++ ++
Sbjct: 121 ERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELR 180
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G K+ +++LSSITSLKKLCNHP L+ DK DGF A+++ P GY+ S L
Sbjct: 181 EG---KMSVSSLSSITSLKKLCNHPALIHDKCVEEEDGFVGALDLFPPGYS----SKALE 233
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+LS K++VLD +LAV + + DK+VLVSNYT+TLDLFE+L + R Y YVRLDG+M+IKK
Sbjct: 234 PQLSGKMLVLDYILAVTRSCSSDKVVLVSNYTRTLDLFEKLCRARRYLYVRLDGTMSIKK 293
Query: 553 RAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
RAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDG
Sbjct: 294 RAKVVERFNSPSSPDFVFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDG 353
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
QKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E +
Sbjct: 354 QKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEAS 413
Query: 672 ISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GV 728
+SDTHD++ C RCVN Q++PPP SDCT DL+ W+H T+KR L D +L+ W A +
Sbjct: 414 LSDTHDRLHCRRCVNSRQIRPPPDGSDCTSDLAQWNHCTDKRGLQDEVLQAAWDAASTAI 473
Query: 729 SFVFYQHSTKAEK 741
+FVF+Q S + ++
Sbjct: 474 TFVFHQRSHEEQR 486
>gi|7384851|dbj|BAA93079.1| Rad54 homolog [Neurospora crassa]
Length = 834
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 340/688 (49%), Positives = 433/688 (62%), Gaps = 62/688 (9%)
Query: 69 QILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP---- 117
Q+ K F VP++N Y+ LG+R +GA K LHDP A+VLY P
Sbjct: 108 QVFRKAFSVPLINKNTTAYNPNRPPPTLGLR-QGAVFVAKPLHDPCDEFAIVLYDPTVDD 166
Query: 118 -PQLSAHDLL----------------------------KIDKDKIQVHVVVDPVLSNILR 148
P+ +A + + K++ + +V VV+DP L+ +LR
Sbjct: 167 KPKDTAPEAIEEKKEEPEVKVDAPLVHKSLAEILGIKKKVEGEHPRVPVVIDPRLAKVLR 226
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDK 207
PHQ EGV+FMY CVTG+ E A GCIMADEMGLGKTLQCITL+WTLL+Q P A K I K
Sbjct: 227 PHQIEGVRFMYRCVTGMIDEKANGCIMADEMGLGKTLQCITLLWTLLKQSPDAGKSTIQK 286
Query: 208 AIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPIL 265
AI+ PSSLV+NW NE+ KWLG + IDG SK E+ +L + GR P++
Sbjct: 287 AIVACPSSLVRNWANELVKWLGADAITPFAIDGKASKEELTRQLRQWAIASGRSVTRPVI 346
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQND
Sbjct: 347 IVSYETLRLNVDELKGTPIGLMLCDEGHRLKNGDSQTFSALNSLNVSRRVILSGTPIQND 406
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EYF+L+ N +LGT EFRK++E PILRG+ + AS+AER + +E L +L+ IVN+
Sbjct: 407 LSEYFALITVANPDLLGTRLEFRKRFEIPILRGRHADASEAERKRGDECLVELLAIVNKF 466
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
+IRRT+ +LSKYLPVK E VV + Q +LY + S ++ ++G G L
Sbjct: 467 IIRRTNDILSKYLPVKYEHVVFCNLAPFQLDLYNYFVASPDIQALLRGK-----GSQPLK 521
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVL 502
+I LKKLCNHPDL + AD P Y G+ + S K+ VL
Sbjct: 522 AINILKKLCNHPDL----LDLSAD-LPGCEQYWPEDYVPKEARGRDRDVKPWYSGKMQVL 576
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+ FN
Sbjct: 577 DRMLARIRADTNDKIVLISNYTQTLDLFERLCRNRQYGCLRLDGTMNVNKRQKLVDKFND 636
Query: 563 -TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF
Sbjct: 637 PEGDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRF 696
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ R LF T SDTHD KC
Sbjct: 697 IATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDS-RELFTYRPGTKSDTHDTFKC 755
Query: 682 SRC-VNGIQVKPPPLESDCTDDLSCWHH 708
RC +G Q ++ D S W+H
Sbjct: 756 KRCKPDGRQYM--KAQAMLYGDTSTWNH 781
>gi|390597886|gb|EIN07285.1| SNF2 family domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 846
Score = 617 bits (1592), Expect = e-174, Method: Compositional matrix adjust.
Identities = 356/725 (49%), Positives = 451/725 (62%), Gaps = 91/725 (12%)
Query: 91 ALGVRREG--ARKALHDPTAPNALVLYTP------------------------------- 117
+LG+R + + LHDP A+VLY P
Sbjct: 125 SLGLRPQANLIPRPLHDPMEDQAIVLYDPTIDDRETDEERKEREKEEAREQAEKAARDKT 184
Query: 118 -----PQLSAHDLLKIDKDKIQ----VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
P S +LL K+K + V VV+DP L+ +LRPHQ EGVKF++ C +G+ +E
Sbjct: 185 VGMFNPHKSLRELLGGGKEKKKTAHKVAVVIDPRLTKVLRPHQVEGVKFLFRCTSGMVVE 244
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKW 227
+ YGCIMADEMGLGKTLQCI L+WTL++Q P A KP I+K II PSSLVKNW NE+ KW
Sbjct: 245 NQYGCIMADEMGLGKTLQCIALLWTLVKQSPHAGKPTIEKCIIACPSSLVKNWANELVKW 304
Query: 228 LG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNP-----------ILVISYETFRS 274
LG ++AL +DG GSK E+ ++ + GR P ++++SYET R+
Sbjct: 305 LGKDAISALAVDGKGSKGELLERVARWTAASGRNVTQPDRVTKSPNMSKVMIVSYETLRT 364
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
L+ ++GL+LCDEGHRLKN ESQTYQAL GL KRRV+L+GTPIQNDL EYFSL+
Sbjct: 365 LTVYLNGCKIGLLLCDEGHRLKNAESQTYQALTGLDVKRRVILTGTPIQNDLTEYFSLLD 424
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
F N LGT EFRK +E I+RG+D+ A+D + ++L++L G+V + +IRRT+ LL
Sbjct: 425 FANPNYLGTRNEFRKNFENIIIRGRDADATDKAKEDCEKKLKELSGLVTKFIIRRTNDLL 484
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
SKYLPVK EQVV K + LQ LY I S ++ ++G E+ L +I LKKLC
Sbjct: 485 SKYLPVKYEQVVFCKPSPLQLSLYRLFIASPEIKALLRGKESQ-----PLKAINVLKKLC 539
Query: 455 NHP---DLVMDKIQTGA---DGF----ENAMNILPTGYAASYKSGKLLI--ELSAKLMVL 502
NHP DL D +G+ D F E+A + + G ++ E S K +VL
Sbjct: 540 NHPELLDLPKDLHGSGSLIPDDFCGMGESATRSGGSSSRSRGGGGAQIVHPEWSGKFVVL 599
Query: 503 DTMLAVIKM-----TTDDKIVLVSNYTQTLDLFERLSKLRG-----YKYVRLDGSMTIKK 552
D LA I DKIVL+SNYTQTLDLFERL + R Y Y RLDG+MTI K
Sbjct: 600 DRFLAQINAGNADKENKDKIVLISNYTQTLDLFERLLRARNGYSNRYHYYRLDGTMTIPK 659
Query: 553 RAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R K+V+ FN TS EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDG
Sbjct: 660 RQKLVDDFNNPTSKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDG 719
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
QKK CFVYRF+STG+IEEK+ QRQA K+ALSS VVD +ED RHFS+S+LR LF ENT
Sbjct: 720 QKKACFVYRFISTGTIEEKIFQRQASKQALSSAVVDEKEDAERHFSLSQLRELFLFNENT 779
Query: 672 ISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-AG 727
+S+TH+ KC RC NG Q +K P + D S W+H T E R D +L+
Sbjct: 780 LSETHETFKCKRCKNGKQLIKVPAM---LYGDASTWNHYTNPELRNNHDDLLRQEVSLPE 836
Query: 728 VSFVF 732
VSFVF
Sbjct: 837 VSFVF 841
>gi|190348945|gb|EDK41499.2| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 616 bits (1588), Expect = e-173, Method: Compositional matrix adjust.
Identities = 337/690 (48%), Positives = 434/690 (62%), Gaps = 64/690 (9%)
Query: 71 LAKPFKVPIL-------NYTGGGYSTKALGVRREG--ARKALHDPTAPNALVLYTP---- 117
L K F VP Y G ALG RR+ + LHDPT+ A+VLY P
Sbjct: 107 LKKSFSVPFAKGSKGEATYGTNGGPPPALGTRRQAILPPRPLHDPTSEFAIVLYDPTMES 166
Query: 118 -------------PQLSAHD-----------------LLKIDKDKIQ---VHVVVDPVLS 144
P+ D +L I K + + V VV+DP L+
Sbjct: 167 FDQGDDGDKKEPTPESETDDSKKDSSRRKSQHRSLAEILGIYKPQTKFADVPVVIDPRLA 226
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
+LRPHQ GVKF+Y C +G+ A GCIMADEMGLGKTLQCI LMWTLLRQGP
Sbjct: 227 KVLRPHQVAGVKFLYRCTSGLMDPRAKGCIMADEMGLGKTLQCIALMWTLLRQGPRGTKT 286
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNSFMQTYGRRPV 261
I K IIV PSSLV+NW NEI KWLG G + L +DG S A++ L + GR V
Sbjct: 287 ISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQQWSVASGRNIV 346
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL L+ +RRV+LSGTP
Sbjct: 347 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNALRCERRVILSGTP 406
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL EYFSL++F N G LGT +FRK +E ILRG+D+ A+D E+ +++L L +
Sbjct: 407 IQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKEIGDQKLSDLSKL 466
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
V++ +IRRT+ +LSKYLP+K E VV +K++ LQK LY + + S VR+ +KG G
Sbjct: 467 VSKFIIRRTNDILSKYLPIKYEYVVFVKLSPLQKALYKHFLTSPEVRKLLKGA-----GS 521
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
L +I LKKLC HP+L+ ++ G E +ILP Y +S + ++ S K +
Sbjct: 522 QPLKAIGMLKKLCTHPELL--RLPEEVSGSE---DILPDDYESSGRDKEIRTWYSGKFAM 576
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
L+ L I+ TDDKIVL+SNYTQTLDL ER+ + + Y+ RLDG+M I KR K+V+ FN
Sbjct: 577 LERFLHQIRTETDDKIVLISNYTQTLDLIERMCRYKRYQCCRLDGTMNINKRQKLVDRFN 636
Query: 562 KT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YR
Sbjct: 637 DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYR 696
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
F+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ + +T+ DTHD K
Sbjct: 697 FISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVDRLFSADLLRQLFQFQPDTLCDTHDTFK 756
Query: 681 CSRC-VNGIQVKPPPLESDCTDDLSCWHHV 709
C RC +G ++K P + D + W+H+
Sbjct: 757 CPRCDPSGQRMKAPAM---LYGDSTTWNHL 783
>gi|299753319|ref|XP_001833199.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
gi|298410246|gb|EAU88472.2| SNF2 family domain-containing protein [Coprinopsis cinerea
okayama7#130]
Length = 840
Score = 615 bits (1586), Expect = e-173, Method: Compositional matrix adjust.
Identities = 345/707 (48%), Positives = 442/707 (62%), Gaps = 89/707 (12%)
Query: 101 KALHDPTAPNALVLYTP------------------------------------PQLSAHD 124
+ LHDP +A+VLY P P S
Sbjct: 143 RPLHDPMEDHAIVLYDPTIDDRETDEERQERLKQEAKEKAEQEAKEKTAGLYNPHKSLKK 202
Query: 125 LL-KIDKDKIQVH---VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
LL + +KDK +V VV+DP LS +LRPHQ EGVKF+Y C TG+ E+ YGCIMADEMG
Sbjct: 203 LLGETEKDKAKVDKVPVVIDPRLSKVLRPHQVEGVKFLYRCTTGMVEENQYGCIMADEMG 262
Query: 181 LGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPID 238
LGKTLQCI LMWTLL+Q P +P I+K II PSSLVKNW NE+TKWLG V L ID
Sbjct: 263 LGKTLQCIALMWTLLKQSPHPGRPTIEKCIIACPSSLVKNWANELTKWLGKDTVTPLAID 322
Query: 239 G-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
G G KAE+ K+ ++ GR P++++SYET R+ L ++GL+LCDEGHRLKN
Sbjct: 323 GKGGKAELLEKVARWVAARGRNVTQPVMIVSYETLRTLTVYLAGCKIGLLLCDEGHRLKN 382
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
ES T+QAL L RRV+L+GTPIQNDL EYFSL++F N LG+ +FRK +E I+R
Sbjct: 383 SESLTFQALNSLDVNRRVILTGTPIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIR 442
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G+DS ASDA + + +L++L G+V + +IRRT+ LLSKYLPVK EQVV ++D Q L
Sbjct: 443 GRDSDASDAVKAASEAKLKELGGLVMKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLAL 502
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMN 476
Y I S ++ ++G E+ L +I LKKLCNHP+L+ + K G+D +
Sbjct: 503 YRLFITSPEIKALLRGTESQ-----PLKAINILKKLCNHPELLDLPKDLKGSD------H 551
Query: 477 ILPTGYAASYKSGK---------LLIELSAKLMVLDTM-----------------LAVIK 510
++P G+ + + + + + S K +VL+ + L I
Sbjct: 552 LIPEGFVGAGQQQQGRGAGRNVGVRCDWSGKFLVLERLVHSVRAGPSVTEPSNRFLHQIH 611
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIF 569
T+DKIVL+SNYTQTLDLFE+L + + Y Y RLDG+M+I KR K+V+ FN EFIF
Sbjct: 612 TQTNDKIVLISNYTQTLDLFEKLLRSKKYGYFRLDGTMSITKRQKLVDQFNDPNGKEFIF 671
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEE
Sbjct: 672 LLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEE 731
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
K+ QRQA K+ALSS VVD +ED RHFS+ LR LF E T+ DTH+ KC RC +G Q
Sbjct: 732 KIFQRQASKQALSSAVVDEKEDTERHFSLDSLRQLFTFNEKTLCDTHETFKCKRCKDGKQ 791
Query: 690 -VKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-AGVSFVF 732
VK P L D S W+H T E + D +L+ G VSFVF
Sbjct: 792 MVKSPAL---LYGDASTWNHFTNPELKNNHDDLLRAEVGLPEVSFVF 835
>gi|403417896|emb|CCM04596.1| predicted protein [Fibroporia radiculosa]
Length = 815
Score = 615 bits (1585), Expect = e-173, Method: Compositional matrix adjust.
Identities = 341/723 (47%), Positives = 451/723 (62%), Gaps = 73/723 (10%)
Query: 71 LAKPFKVPILNYTGGGY-----STKALGVRREG--ARKALHDPTAPNALVLYTPP----- 118
+++ F +P + G S +LG+R + LHDP +A+VLY P
Sbjct: 100 VSRRFSIPEMRNKDGDVVQIIPSNASLGIRPLANIIPRPLHDPMEDHAIVLYDPTIDDKE 159
Query: 119 ----------------------QLSA-----HDLLKI--------DKDKIQVHVVVDPVL 143
Q +A H LK+ K +V VV+DP L
Sbjct: 160 TDEERKEREKEAAKEKAAEEARQKTAGLYNPHKSLKLLLGGGNEKRKKNDKVAVVIDPRL 219
Query: 144 SNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-K 202
+LRPHQ EGVKF+Y+C TG+ +E+ YGCIMADEMGLGKTLQCI L+WTL++Q P A K
Sbjct: 220 CKVLRPHQIEGVKFLYKCTTGMIVENQYGCIMADEMGLGKTLQCIALLWTLVKQSPHAGK 279
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRP 260
P I+K II PSSLVKNW NE+ KWLG V+AL IDG G KAE+ ++ ++ GR
Sbjct: 280 PTIEKCIIACPSSLVKNWANELVKWLGKDTVSALAIDGKGGKAEMLARVARWVAAGGRNV 339
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
P++++SYET RS + L +GL+LCDEGHRLKN ES T+QAL GL +RRV+LSGT
Sbjct: 340 SQPVMIVSYETLRSLTAHLANCSIGLLLCDEGHRLKNSESLTFQALNGLNVRRRVILSGT 399
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
PIQNDL EYFSL++F N LG+ +FRK +E I+RG+D+ ASD + + ++L++L G
Sbjct: 400 PIQNDLSEYFSLLNFANPNFLGSKNDFRKNFENAIIRGRDADASDQTKAECEKKLKELGG 459
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
+V + +IRRT+ LLSKYLPVK EQVV ++ Q LY I S ++ ++G ++
Sbjct: 460 LVAKFIIRRTNDLLSKYLPVKYEQVVFCGLSPFQLSLYRLFISSPEIQALLRGADS---- 515
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK-------LLI 493
L +I LKKLCNHP+L+ + + + P ++ + S + +
Sbjct: 516 -QPLKAINILKKLCNHPELL-----DLPNDLRGSEKLQPEDFSGAGGSSRDKGRNQTVRC 569
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S K MVL+ L I T+DKIVL+SNYTQTLDLFE+L + + Y Y RLDGSMTI KR
Sbjct: 570 DYSGKFMVLERFLHRIHTETNDKIVLISNYTQTLDLFEKLLRSKKYGYFRLDGSMTINKR 629
Query: 554 AKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
K+V+ FN EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA D QA+ARVWRDGQ
Sbjct: 630 QKLVDQFNDPNGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQ 689
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KK CFVYRF+ TG+IEEK+ QRQA K+ALSS VVD ED RHFS+ LR LF E T+
Sbjct: 690 KKECFVYRFICTGTIEEKIFQRQASKQALSSAVVDEMEDAERHFSLDSLRKLFLFNEKTL 749
Query: 673 SDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWGAG-VS 729
+TH+ KC RC +G Q+ ++ D S W+H T E + D +L+ G+ VS
Sbjct: 750 CETHETFKCKRCKDGKQIMKA--QALLYGDASTWNHFTNMELKNNHDDLLRAEVGSSEVS 807
Query: 730 FVF 732
FVF
Sbjct: 808 FVF 810
>gi|119194699|ref|XP_001247953.1| hypothetical protein CIMG_01724 [Coccidioides immitis RS]
Length = 846
Score = 614 bits (1584), Expect = e-173, Method: Compositional matrix adjust.
Identities = 337/683 (49%), Positives = 435/683 (63%), Gaps = 75/683 (10%)
Query: 75 FKVPILNYTGGGYS----TKALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F +P+++ Y LG+RR GA K LHDP+ A+VLY P
Sbjct: 94 FSIPLIDKNSTSYDPGRPAPLLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDEKPEFKP 152
Query: 118 ------------PQL-------SAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQREGV 155
P+L S ++L I K+ + +V VV+DP L+ +LRPHQ EGV
Sbjct: 153 ETEQKQNEEAAKPKLNEPLVHKSLAEILGIKKNVEERPKVPVVIDPRLAKVLRPHQVEGV 212
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPS 214
KF+Y C TG+ +A GCIMADEMGLGKT P A KP + K +I P+
Sbjct: 213 KFLYRCTTGLIDPNANGCIMADEMGLGKT-------------SPEAGKPTVQKVVIACPA 259
Query: 215 SLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
+LV NW NE+ KWLG V IDG SKAE+ ++L + GR+ V P+L++SYET
Sbjct: 260 TLVGNWANELVKWLGKDAVNPFVIDGKASKAELTSQLRQWAIASGRQVVRPVLIVSYETL 319
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R + L + +GL+LCDEGHRLKN ESQT+ AL GL RRVLLSGTPIQNDL EY+SL
Sbjct: 320 RLNVGELKETPIGLLLCDEGHRLKNGESQTFTALNGLNVARRVLLSGTPIQNDLSEYYSL 379
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
++F N G+LG+ EF K++E PILRG+D+ ++ ER K +E L +L+GIVN+ +IRR++
Sbjct: 380 LNFTNPGVLGSRSEFHKRFEMPILRGRDADGTEEERKKGDECLAELLGIVNKFIIRRSND 439
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I LKK
Sbjct: 440 ILSKYLPVKYEHVVFCNLAPFQMDLYNHFIQSPDIKSLLRGK-----GSQPLKAIGILKK 494
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVI 509
LCNHPDL + AD + P Y G+ + S K+MVLD MLA I
Sbjct: 495 LCNHPDL----LNLSAD-LPGSEQFFPDDYVPPEGRGRDRDVKSWYSGKMMVLDRMLARI 549
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFI 568
+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+MT+KKR K+V+ FN EF+
Sbjct: 550 RQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMTVKKRQKLVDRFNDPDGEEFV 609
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TGSIE
Sbjct: 610 FLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGSIE 669
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ+HK+ LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G
Sbjct: 670 EKIFQRQSHKQLLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCRRCRPDG 729
Query: 688 IQ-VKPPPLESDCTDDLSCWHHV 709
Q +K P + D S W+H+
Sbjct: 730 TQFIKAPAM---LYGDTSSWNHL 749
>gi|358054278|dbj|GAA99204.1| hypothetical protein E5Q_05897 [Mixia osmundae IAM 14324]
Length = 911
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 328/679 (48%), Positives = 438/679 (64%), Gaps = 60/679 (8%)
Query: 101 KALHDPTAPNALVLY-----------------------TPPQLSAHDL--------LKID 129
+ LHDP A+VL+ TP +L A D+ L +D
Sbjct: 241 RPLHDPLGDRAIVLWDPTVDDKEAELEAARLAEQAKTVTPVKLEARDIVHKSIASILGLD 300
Query: 130 KD--------KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
K K +V VV+DP L +LRPHQ EGVKF+Y+ TG+ E A+GCIMADEMGL
Sbjct: 301 KQNEREAELRKRKVPVVLDPRLGKVLRPHQVEGVKFLYKAATGMISEGAFGCIMADEMGL 360
Query: 182 GKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG 239
GKTLQCITL++TLL+Q P A K I+KAI+V P+SLV+NW NE KWLG G + L IDG
Sbjct: 361 GKTLQCITLLFTLLKQSPKAGKGTIEKAIVVCPASLVRNWANEFVKWLGPGTINPLAIDG 420
Query: 240 G-SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
K ++ L ++ +GR P++++SYET RS + L +GL+LCDE HRLKN
Sbjct: 421 SMPKPDLMAALRQWVSAHGRAICQPVIIVSYETLRSLTAELGNAPIGLILCDEAHRLKNA 480
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+ TY L + +RRVLL+GTP+QNDL EYFSL++F G LG +F+K YE I+RG
Sbjct: 481 TNLTYTELDKINVQRRVLLTGTPVQNDLTEYFSLLNFAIPGKLGARADFKKNYELAIVRG 540
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ S A+D ER + E+L++L +VN+ +IRRT+ LL+KYLPVK E VV ++ LQ +LY
Sbjct: 541 RMSEATDKERERCQEKLKELTSLVNQFVIRRTNDLLTKYLPVKYEHVVFCNLSPLQLQLY 600
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
LIK + + K G +AL +I +KLCNHP L+ + D F+N M
Sbjct: 601 QKLIKRPEEK-------DAKGGTSALGAIQRAQKLCNHPQLLDAYFRDNFDDFKNDM--- 650
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRG 538
P G+ + ++ E S K +VLD L ++ T+DKIVL+SNYT+TLD+FE++ + R
Sbjct: 651 PDGFDPFDRRRSVVSEYSGKTLVLDRFLEKMRAETNDKIVLISNYTETLDVFEKMLRDRK 710
Query: 539 YKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
Y Y RL+GS +IKKR K+V+ FN EF+F+LSSKAGGCG+NLIGANRL++FDPDWNP
Sbjct: 711 YGYFRLEGSTSIKKRQKLVDEFNNPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNP 770
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFS 657
A D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQAHK+ALSSCVVD +ED RHFS
Sbjct: 771 AADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQAHKQALSSCVVDAKEDAERHFS 830
Query: 658 MSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVTEK--RW 714
+L+ LF + NTIS+THD KC RC +G Q ++ P + D S W+H++ +
Sbjct: 831 RDDLKQLFAYKANTISETHDTFKCKRCKDGRQSIRAPAM---LYGDTSTWNHMSNDCLQN 887
Query: 715 LVDPILKHCWGAG-VSFVF 732
+ D +L+ G G VS VF
Sbjct: 888 IHDDLLRAETGLGAVSAVF 906
>gi|146413212|ref|XP_001482577.1| hypothetical protein PGUG_05597 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 612 bits (1578), Expect = e-172, Method: Compositional matrix adjust.
Identities = 336/690 (48%), Positives = 433/690 (62%), Gaps = 64/690 (9%)
Query: 71 LAKPFKVPIL-------NYTGGGYSTKALGVRREG--ARKALHDPTAPNALVLYTP---- 117
L K F VP Y G ALG RR+ + LHDPT+ A+VLY P
Sbjct: 107 LKKSFSVPFAKGSKGEATYGTNGGPPPALGTRRQAILPPRPLHDPTSEFAIVLYDPTMES 166
Query: 118 -------------PQLSAHD-----------------LLKIDKDKIQ---VHVVVDPVLS 144
P+ D +L I K + + V VV+DP L+
Sbjct: 167 FDQGDDGDKKEPTPESETDDSKKDSSRRKSQHRSLAEILGIYKPQTKFADVPVVIDPRLA 226
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
+LRPHQ GVKF+Y C +G+ A GCIMADEMGLGKTLQCI LMWTLLRQGP
Sbjct: 227 KVLRPHQVAGVKFLYRCTSGLMDPRAKGCIMADEMGLGKTLQCIALMWTLLRQGPRGTKT 286
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNSFMQTYGRRPV 261
I K IIV PSSLV+NW NEI KWLG G + L +DG S A++ L + GR V
Sbjct: 287 ISKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDGKSTKSADLGPALQQWSVASGRNIV 346
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL L+ +RRV+LSGTP
Sbjct: 347 RPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNALRCERRVILSGTP 406
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL EYFSL++F N G LGT +FRK +E ILRG+D+ A+D E+ +++L L +
Sbjct: 407 IQNDLSEYFSLLNFSNPGYLGTRNDFRKNFENAILRGRDADATDKEKEIGDQKLSDLSKL 466
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
V++ +IRRT+ +LSKYLP+K E VV +K++ LQK LY + + S VR+ +KG G
Sbjct: 467 VSKFIIRRTNDILSKYLPIKYEYVVFVKLSPLQKALYKHFLTSPEVRKLLKGA-----GS 521
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
L +I LKKLC HP+L+ ++ G E +ILP Y +S + ++ S K +
Sbjct: 522 QPLKAIGMLKKLCTHPELL--RLPEEVLGSE---DILPDDYESSGRDKEIRTWYSGKFAM 576
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
L+ L I+ TDDKIVL+SNYTQTLDL ER+ + + Y+ RLDG+M I KR K+V+ FN
Sbjct: 577 LERFLHQIRTETDDKIVLISNYTQTLDLIERMCRYKRYQCCRLDGTMNINKRQKLVDRFN 636
Query: 562 K-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YR
Sbjct: 637 DPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYR 696
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
F+ TG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ + +T+ DTHD K
Sbjct: 697 FILTGTIEEKIFQRQSMKLSLSSCVVDEKEDVDRLFSADLLRQLFQFQPDTLCDTHDTFK 756
Query: 681 CSRC-VNGIQVKPPPLESDCTDDLSCWHHV 709
C RC +G ++K P + D + W+H+
Sbjct: 757 CPRCDPSGQRMKAPAM---LYGDSTTWNHL 783
>gi|321257722|ref|XP_003193686.1| DNA recombination and repair protein Rad54B [Cryptococcus gattii
WM276]
gi|317460156|gb|ADV21899.1| DNA recombination and repair protein Rad54B, putative [Cryptococcus
gattii WM276]
Length = 818
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 332/713 (46%), Positives = 451/713 (63%), Gaps = 63/713 (8%)
Query: 70 ILAKPFKVPILNYTGGG------YSTKALGVRREG--ARKALHDPTAPNALVLYTP---- 117
+ K F +PI+ S +LG RR + LHDP +A+VL+ P
Sbjct: 114 VFTKSFSIPIMYCPKTSEPIIHSLSHASLGARRHPTLVPRPLHDPMDDHAIVLFDPTIDD 173
Query: 118 -------------------------PQLSAHDLLKI-----DKDKIQVHVVVDPVLSNIL 147
P S +L I +K ++V VV+DP LS +L
Sbjct: 174 KPNPEDINIIESLEEMKKKEELNKGPHRSLKVILGIVDEKKNKQVVKVPVVIDPRLSKVL 233
Query: 148 RPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLID 206
RPHQ EGVKF+Y C TG+ + A+GCIMADEMGLGKTLQCI L+WTLL+Q P+A KP +
Sbjct: 234 RPHQIEGVKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTLLKQSPIAGKPTCE 293
Query: 207 KAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPI 264
K +I P+SLV NW NE+ KWLG G V + +DG G KAE+ + ++Q +GR P+
Sbjct: 294 KVVIACPTSLVGNWANELVKWLGSGAVNPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPV 353
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
+++SYET R+ L E+GL+L DEGHRLKN E+ T+QAL LK +RRV+L+GTPIQN
Sbjct: 354 MIVSYETLRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQN 413
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL EYF+L++F N LG+ +F+K +E+ ILRG+D+ A++ E+ +++ +L++L G+V++
Sbjct: 414 DLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSK 473
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
+IRRT+ LLSKYLPVK E VV + + LQ LY + S V+R ++G ++ L
Sbjct: 474 FIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQ-----PL 528
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
+I L+KL NHPDL+ + + +LP GY + + + S K +VL+
Sbjct: 529 KAIGLLRKLVNHPDLL-----NLPEDLPGSETLLPDGYNGKGRDRTVNCQYSGKFVVLER 583
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT- 563
ML IK T+DKIVL+SN TQTLDL E+L + + Y Y+RLDGSM++ KR+K+V FN+
Sbjct: 584 MLDHIKHHTNDKIVLISNATQTLDLMEKLCRSKRYGYLRLDGSMSVPKRSKIVAQFNQPE 643
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
S EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF +
Sbjct: 644 SKEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQT 703
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ K+ LS+CVVD ED ARHF+ +LR LF+ T+ DTHD KC R
Sbjct: 704 TGTIEEKIFQRQCQKQNLSACVVDEAEDTARHFTQGDLRQLFKFNPETLCDTHDTYKCKR 763
Query: 684 CVNGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKHCWG-AGVSFVF 732
C G Q VK L D S W+H + + D +L+ G VS+VF
Sbjct: 764 CREGKQFVKAQAL---LYGDASTWNHYPNEELGKMHDDLLRAELGLPEVSYVF 813
>gi|50546160|ref|XP_500607.1| YALI0B07513p [Yarrowia lipolytica]
gi|49646473|emb|CAG82840.1| YALI0B07513p [Yarrowia lipolytica CLIB122]
Length = 807
Score = 610 bits (1572), Expect = e-171, Method: Compositional matrix adjust.
Identities = 352/783 (44%), Positives = 459/783 (58%), Gaps = 84/783 (10%)
Query: 1 RRSLAPSQ-----LSKRSPEDSPGI--KTFPPPVKKEKRSCTS-----RKPLGSVDNEDE 48
RR+ APSQ L P D + K F P S S R+ +V N E
Sbjct: 2 RRNKAPSQIREHGLPAERPRDPMDVLHKPFKRPAPSSGSSYNSNWQPSRRARTAV-NYTE 60
Query: 49 PNSKLPMTKEEMSEHEN---LIRQ----ILAKPFKVPILNYTGGGY-STKALGVRR--EG 98
+ P+ + + E ++R+ +L + F+VP N S ALG+R+ +
Sbjct: 61 GDPDAPVYRSDDPEKRGGGAVVRRDPLAVLNQNFRVPFKNRNDDFVESFPALGMRKPVDF 120
Query: 99 ARKALHDPTAPNALVLY---------------------------------------TPPQ 119
+ LHDP A+VLY P +
Sbjct: 121 VPRPLHDPAGEFAIVLYDPTVDGVKDAVTEEDIQTATEMTLSQSETDVETVEEMRTIPKK 180
Query: 120 LSAHDLLKID-------KDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYG 172
L+ ++L I K+ +V VV+DP L+ ILRPHQ EGVKF+Y TG+ A+G
Sbjct: 181 LTLAEILGISPRDKQKPKEYPEVPVVIDPKLAKILRPHQVEGVKFLYRATTGLINPKAHG 240
Query: 173 CIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GR 231
CIMADEMGLGKTLQCI L+WTLL+Q P K I KAI+V PSSLV+NW E KWLG G
Sbjct: 241 CIMADEMGLGKTLQCIALLWTLLKQSPQGKGTISKAIVVCPSSLVRNWAAEFVKWLGEGV 300
Query: 232 VAALPIDGGSK-AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
V +DG K AE+ L + + GR+ P+L+ISY+T R + +EVGL+L D
Sbjct: 301 VVPYAVDGSQKPAELTAGLRQWAEAEGRKVTRPVLIISYDTLRRQVGAIADSEVGLLLAD 360
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGH+LKN +SQT+ AL L KRRV+LSGTPIQNDLLEYFSL++F N G+LGT EFRK
Sbjct: 361 EGHKLKNGDSQTFTALNQLNVKRRVILSGTPIQNDLLEYFSLLNFSNPGLLGTKGEFRKN 420
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
YE PIL+G+D+ +D + KA +L ++ IV+ +IRRT+ +LSKYLPVK E VV +
Sbjct: 421 YEIPILKGRDADGTDKDVEKAEAKLLEMASIVSPLIIRRTNDILSKYLPVKYEHVVFCNL 480
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
QK LY S R +K GE + G T L++I LKKLCNHPDL+ D
Sbjct: 481 APFQKSLYVQFRTSKEARSLLK-GEKSSEGTTTLNAIGILKKLCNHPDLL-----KLPDE 534
Query: 471 FENAMNILPTGYAASYKSGK----LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
E + P YA + G + SAK ++L+ ML I T+DKIV++SNYT T
Sbjct: 535 IEGCRKVFPDDYAPPDERGSRDRDIYPHFSAKFLILERMLRSINAETNDKIVIISNYTAT 594
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGA 585
LDL E++ + R Y +RLDG+M I KRAK+V FN EFIF+LSSKAGGCGLNLIGA
Sbjct: 595 LDLIEKMCRQRRYGCLRLDGTMNINKRAKLVTQFNDPEGQEFIFLLSSKAGGCGLNLIGA 654
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRL++ DPDWNPA D QA+ARVWRDGQKK CFVYR ++TG+IEEK+ QRQ+ K++LS+CV
Sbjct: 655 NRLILMDPDWNPAADQQALARVWRDGQKKDCFVYRLIATGTIEEKIFQRQSMKQSLSTCV 714
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
VD +DV RH+SMS LR LF ++ T +THD +C RC G Q + P + D +
Sbjct: 715 VDEVQDVERHYSMSNLRELFSYDDATPCNTHDMYECKRCRGGKQYQRAP--AMLYGDATT 772
Query: 706 WHH 708
W+H
Sbjct: 773 WNH 775
>gi|344231402|gb|EGV63284.1| hypothetical protein CANTEDRAFT_106747 [Candida tenuis ATCC 10573]
Length = 817
Score = 609 bits (1570), Expect = e-171, Method: Compositional matrix adjust.
Identities = 327/657 (49%), Positives = 419/657 (63%), Gaps = 58/657 (8%)
Query: 101 KALHDPTAPNALVLYTP--------------PQLSAHD--------------------LL 126
+ALHDP + A+VLY P P+ + D +L
Sbjct: 148 RALHDPLSEFAIVLYDPTVDVIPGEEEKTEEPKQESDDNKENKEPATKKRKVHKSLAEIL 207
Query: 127 KIDKDK------IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
I K K V VV+DP L+ ILRPHQ EGVKF+Y C +G+ A GCIMADEMG
Sbjct: 208 GISKYKDDASKHPNVPVVIDPRLAKILRPHQVEGVKFLYRCTSGLIDPKAKGCIMADEMG 267
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG 239
LGKTLQCI LMWTLL+Q P + I K IIV PSSLV+NW NEI KWLG G + L IDG
Sbjct: 268 LGKTLQCIALMWTLLKQSPRGRKTISKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDG 327
Query: 240 GS--KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
S +EI + L + GR V P+L+ISYET R H L EVGL+L DEGHRLKN
Sbjct: 328 KSVKNSEIGDSLKQWSVASGRNVVRPVLIISYETLRRHVDKLSGTEVGLMLADEGHRLKN 387
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+S T+ AL L+ +RRV+LSGTPIQNDL EYFSL++F N LGT +FR+ YE ILR
Sbjct: 388 GDSLTFNALNELRCERRVILSGTPIQNDLSEYFSLLNFSNPNYLGTRNDFRRNYENDILR 447
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G+D+ ASD ER +++L +L +V+R +IRRT+ +LSKYLP+K E V+ + ++ LQ +L
Sbjct: 448 GRDADASDKERESGDKKLNELTTLVSRFIIRRTNDILSKYLPIKYEHVIFVNLSPLQTKL 507
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y I S +++ +KG G L +I LKKLCNHP+L+ + DG + M
Sbjct: 508 YNFFITSPEIKKLLKGH-----GSQPLKAIGLLKKLCNHPNLL--NLPEDLDGCQELM-- 558
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
P Y YK ++ LS K +L+ L + T DKIVL+SNYTQTLDL ER+ +++
Sbjct: 559 -PDDY--DYKKREVQTWLSGKFSILERFLYKLHHETGDKIVLISNYTQTLDLIERMCRVK 615
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y +RLDG+M I KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRLV+ DPDWN
Sbjct: 616 RYGNLRLDGTMNINKRQKLVDRFNDPDGKEFIFLLSSKAGGCGINLIGANRLVLIDPDWN 675
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PA D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD + DV R F
Sbjct: 676 PAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKVDVERLF 735
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
S L+ LFQ E NT+ DTHD C RC +G+Q+ P + D + W+H+ ++
Sbjct: 736 SADNLKQLFQFESNTVCDTHDTYGCKRCQDGVQLTNAP--AMLYGDATTWNHLNHEK 790
>gi|405120211|gb|AFR94982.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
Length = 818
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 332/713 (46%), Positives = 451/713 (63%), Gaps = 63/713 (8%)
Query: 70 ILAKPFKVPILNYTGGG------YSTKALGVRREGA--RKALHDPTAPNALVLYTP---- 117
+ K F +PI+ S +LG RR + LH+P +A+VL+ P
Sbjct: 114 VFTKSFSIPIMYCPKTSEPIIHSLSHASLGARRHPTLIPRPLHNPMDDHAIVLFDPTIDD 173
Query: 118 -------------------------PQLSAHDLLKI-----DKDKIQVHVVVDPVLSNIL 147
P S +L I +K ++V VV+DP LS +L
Sbjct: 174 KPNPEDIKAAESHEEMKKKEELNKGPHRSLKAILGIVDERKNKQVVKVPVVIDPRLSKVL 233
Query: 148 RPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLID 206
RPHQ EGVKF+Y C TG+ + A+GCIMADEMGLGKTLQCI L+WTLL+Q P+A KP +
Sbjct: 234 RPHQIEGVKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTLLKQSPVAGKPTCE 293
Query: 207 KAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPI 264
K II P+SLV NW NE+ KWLG G V + +DG G KAE+ + ++Q +GR P+
Sbjct: 294 KVIIACPTSLVGNWANELIKWLGSGAVNPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPV 353
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
+++SYET R+ L E+GL+L DEGHRLKN E+ T+QAL LK +RRV+L+GTPIQN
Sbjct: 354 MIVSYETLRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQN 413
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL EYF+L++F N LG+ +F+K +E+ ILRG+D+ A++ E+ +++ +L++L G+V++
Sbjct: 414 DLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSK 473
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
+IRRT+ LLSKYLPVK E VV + + LQ LY + S V+R ++G ++ L
Sbjct: 474 FIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQ-----PL 528
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
+I L+KL NHPDL+ + + +LP GY + + + S K +VL+
Sbjct: 529 KAIGLLRKLVNHPDLL-----NLPEDLPGSETLLPDGYNGKGRDRTVNCQYSGKFVVLER 583
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT- 563
ML IK T+DKIVL+SN TQTLDL E+L + + Y Y+RLDGSM++ KR+K+V FN+
Sbjct: 584 MLDHIKHHTNDKIVLISNATQTLDLMEKLCRGKRYGYLRLDGSMSVPKRSKIVAQFNQPE 643
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
S EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF +
Sbjct: 644 SKEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQT 703
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ K+ LS+CVVD ED ARHF+ +LR LF+ T+ DTHD KC R
Sbjct: 704 TGTIEEKIFQRQCQKQNLSACVVDEAEDTARHFTQGDLRQLFKFNPETLCDTHDTYKCKR 763
Query: 684 CVNGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKHCWG-AGVSFVF 732
C G Q VK L D S W+H + + D +L+ G VS+VF
Sbjct: 764 CREGKQFVKAQAL---LYGDASTWNHYPNEELGKMHDDLLRAELGLPEVSYVF 813
>gi|403216105|emb|CCK70603.1| hypothetical protein KNAG_0E03460 [Kazachstania naganishii CBS
8797]
Length = 902
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 323/647 (49%), Positives = 411/647 (63%), Gaps = 65/647 (10%)
Query: 120 LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED---------- 169
L DL I+K V VV+DP LS ILRPHQ EGVKF+Y CVTG+ ++D
Sbjct: 235 LGMDDLNNIEKKFANVPVVIDPKLSKILRPHQVEGVKFLYRCVTGLAMKDFMDAEKLNTM 294
Query: 170 -----------------------------------AYGCIMADEMGLGKTLQCITLMWTL 194
AYGCIMADEMGLGKTLQCI LMWTL
Sbjct: 295 KEPSQLPPQLEPEGKSPAKNSAKEPVAEVVPARRGAYGCIMADEMGLGKTLQCIALMWTL 354
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG------GSKAEIDN 247
LRQGP K LIDK IIV PSSLV NW NE+ KWLG G ++ L IDG + +
Sbjct: 355 LRQGPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPGTLSPLAIDGKKSSLVSGSSTVSE 414
Query: 248 KLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
++++ Q GR V P+L+ISYET R + L VGL+L DEGHRLKN +S T+ AL
Sbjct: 415 AVHAWAQAKGRNVVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALD 474
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
+ RRV+LSGTPIQNDL EYF+L++F N G+LGT EFRK +E PILRG+D+ A+D E
Sbjct: 475 SINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRAEFRKNFELPILRGRDAGATDKE 534
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
K+ +LE+L +V++ +IRRT+ +LSKYLP K E V+ + + Q LY L++S +V
Sbjct: 535 IKKSEGQLEKLSNVVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPFQHHLYKELLESRSV 594
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYK 487
++T G + G L +I LKKLCNHP+L+ + + G D + + + I P K
Sbjct: 595 KKTTNG----EGGSQPLQAIGILKKLCNHPNLIEFEKEFGED-YPDKLQIPPNYNFPGSK 649
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
S + E S K +L L IK +DDKIVL+SNYTQTLDL ER+ + + Y VRLDG+
Sbjct: 650 SRDVQTEFSGKFSILQRFLHKIKTESDDKIVLISNYTQTLDLIERMCRYQHYGSVRLDGT 709
Query: 548 MTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
MTI KR +V+ FN EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+AR
Sbjct: 710 MTINKRQNLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALAR 769
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
VWRDGQKK CF+YRF++TGSIEEK+ QRQ+ K +LSSCVVD +EDV R FS + L+ LFQ
Sbjct: 770 VWRDGQKKDCFIYRFITTGSIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSANNLKQLFQ 829
Query: 667 LEENTISDTHDKIKCSRC-VNGIQVKPPPLESDCT--DDLSCWHHVT 710
+ENTI +TH+ C RC NG Q L S+ D + W+H+
Sbjct: 830 FKENTICETHETYHCKRCDKNGRQR----LRSNAMLYGDATTWNHLN 872
>gi|238878261|gb|EEQ41899.1| DNA repair and recombination protein RAD54 [Candida albicans WO-1]
Length = 848
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 309/590 (52%), Positives = 401/590 (67%), Gaps = 25/590 (4%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQC+TLMWTL
Sbjct: 244 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLTLMWTL 303
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNS 251
LRQ P K I+K IIV PSSLV+NW NEI KWLG G + L +DG S +E+ L
Sbjct: 304 LRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTALQQ 363
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL L+
Sbjct: 364 WSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSLRC 423
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RRV+LSGTPIQNDL EYFSL++F N G LGT EF+K YE IL+G+DS ASD ER K
Sbjct: 424 ERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDEEREKG 483
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+++L +L +V++ +IRRT+ +LSKYLP+K E V+ ++ +QK++Y + I S +++ M
Sbjct: 484 DKKLNELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHFITSPEIKKLM 543
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG-- 489
KG G L +I LKKLCNHPDL+ + E + +P Y +S G
Sbjct: 544 KG-----TGSQPLKAIGMLKKLCNHPDLL-----DLPEDVEGSEEFIPDDYQSSIAGGSA 593
Query: 490 ----KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
++ S K ++L+ L I TDDKIVL+SNYTQTLDL E++ + + Y +RLD
Sbjct: 594 SRNREIQTWFSGKFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLD 653
Query: 546 GSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
G+M I KR K+V+ FN + EFIF+LSSKAGGCG+NLIGANRLV+ DPDWNPA+D QA+
Sbjct: 654 GTMNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINLIGANRLVLMDPDWNPASDQQAL 713
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS++ LR L
Sbjct: 714 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSVANLRQL 773
Query: 665 FQLEENTISDTHDKIKCSRCVN--GIQVKPPPLESDCTDDLSCWHHVTEK 712
F+ + +T DTHD C+RC G +K P + D + W+H+ +
Sbjct: 774 FKFQPDTQCDTHDTFNCNRCKGDKGQFIKAPAM---LYGDATTWNHLNHQ 820
>gi|392573615|gb|EIW66754.1| hypothetical protein TREMEDRAFT_70028 [Tremella mesenterica DSM
1558]
Length = 816
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 345/735 (46%), Positives = 456/735 (62%), Gaps = 74/735 (10%)
Query: 50 NSKLPM--TKEEMSEHENLIRQILAKPFKVPILNYTGGG------YSTKALGVRREGAR- 100
N K P+ TKE+ + + ++ F +PI+ S ALG R +
Sbjct: 99 NRKFPVFKTKEKTT--------VFSRTFSIPIMTNPKTSQAIVHPLSNAALGARLQPIMP 150
Query: 101 -KALHDPTAPNALVLYTP-----PQLSAHDLLKIDKDK---------------------- 132
K LHDP A +A+VLY P P S LK D++K
Sbjct: 151 PKPLHDPMADHAIVLYDPTIDDRPGPSEIGALKSDEEKARLQAQASGPHKSLRVILGIQD 210
Query: 133 ------IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQ 186
++V VV+DP LS ILRPHQ EGVKF+Y C TG+ E A+GCIMADEMGLGKTLQ
Sbjct: 211 PKKKSEVKVPVVIDPALSKILRPHQIEGVKFLYRCTTGLMAEGAWGCIMADEMGLGKTLQ 270
Query: 187 CITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKA 243
CI LMWTLL+Q P + K +K I+V P+SLV NW NE+ KWLG G + L +DG G K
Sbjct: 271 CIALMWTLLKQSPTSGKGTCEKTIVVCPTSLVGNWANELIKWLGPGAINPLVLDGKGGKP 330
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
E+ + ++Q GR P+L+ SYE R+ +GL+L DEGHRLKN ++ T+
Sbjct: 331 EMIPAVRRWIQATGRGVTQPVLIASYENLRTLQEEFGNAPIGLLLADEGHRLKNADTLTF 390
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
QAL L +RRV+L+GTPIQNDL EYF+L++F N LG+ +F+K +E ILRG+D+ A
Sbjct: 391 QALTQLNVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSRLDFKKNFEAKILRGRDADA 450
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ ER + + +L++L G+V++ +IRRT+ LLSKYLPVK E VV + + LQ +LY +
Sbjct: 451 SEKEREECDAKLKELGGLVSKFIIRRTNDLLSKYLPVKYEHVVFCRPSKLQVDLYNLFVT 510
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGY 482
S V+R ++G ++ L +I L+KL NHPDL+ + + G++ F LP GY
Sbjct: 511 SKDVQRLLRGKDS-----QPLKAIGLLRKLVNHPDLLRLPEDLPGSEKF------LPEGY 559
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
+ + ELS K +VL+ ML I T+DKIVL+SN TQTLDL ERL +L+ Y V
Sbjct: 560 GKVGRERGVNCELSGKFVVLERMLHHIHTQTNDKIVLISNTTQTLDLMERLCRLKKYGCV 619
Query: 543 RLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDGSM++ KR K VE FN N EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA+D
Sbjct: 620 RLDGSMSVPKRNKTVERFNNPENKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQ 679
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA+ARVWRDGQKK CFVYRF +TG+IEEK+ QRQ K+ LS+CVVD ED ARHF+ +L
Sbjct: 680 QALARVWRDGQKKECFVYRFQTTGTIEEKIFQRQCQKQNLSACVVDEAEDTARHFTADDL 739
Query: 662 RSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDP 718
R LF+ T+SDTHD KC RC Q VK L D S W+H+ + + D
Sbjct: 740 RQLFKFHPETLSDTHDTYKCKRCQGSKQNVKSKVL---LYGDSSTWNHLRNEDLDNVHDD 796
Query: 719 ILKHCWGAG-VSFVF 732
+L+ G VS+VF
Sbjct: 797 LLRSEKGKNEVSYVF 811
>gi|389748911|gb|EIM90088.1| SNF2 family domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 825
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 332/689 (48%), Positives = 435/689 (63%), Gaps = 65/689 (9%)
Query: 101 KALHDPTAPNALVLYTP------------------------------------PQLSAHD 124
+ LHDP +A+VLY P P S
Sbjct: 140 RPLHDPMEDHAIVLYDPTIDIRETDEERKEREKEEAKVAALKEADEKNVGLFNPHKSLKL 199
Query: 125 LLKIDKDK---IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
LL K K +V VV+DP L +LRPHQ EGVKF+Y C TG+ +E YGCIMADEMGL
Sbjct: 200 LLGESKKKKVDTRVPVVIDPRLCKVLRPHQVEGVKFLYRCTTGMVVEGQYGCIMADEMGL 259
Query: 182 GKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG 239
GKTLQCI L+WTLL+Q P + K ++K II PSSLVKNW NE+ KWLG + + +DG
Sbjct: 260 GKTLQCIALLWTLLKQSPRSGKGTLEKCIIACPSSLVKNWANELAKWLGKDTITPMAVDG 319
Query: 240 -GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
G KAE+ ++ ++ GR P++++SYET R+ L+ ++GL+LCDEGHRLKN
Sbjct: 320 KGGKAELLQRVERWVAASGRNVTQPVMIVSYETLRTLTVYLNGCQIGLLLCDEGHRLKNS 379
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
ES T+QAL + KRRV+LSGTPIQNDL EYFSL++F N +LGT +FRK +E I+RG
Sbjct: 380 ESLTFQALDAINVKRRVILSGTPIQNDLSEYFSLLNFANPNLLGTKNDFRKNFENIIIRG 439
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+D+ A+D ++ + ++L++L +V++ +IRRT+ LLSKYLPVK EQVV ++D Q +LY
Sbjct: 440 RDADATDKDKAECEKKLKELGELVSKFIIRRTNDLLSKYLPVKYEQVVFCGLSDFQLQLY 499
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM---------DKIQTGAD 469
I S ++ ++G E+ L +I LKKLCNHP+L+ I G
Sbjct: 500 RLFISSPEIKALLRGAESQ-----PLKAINILKKLCNHPELLNLPQDLRGCDHLIPEGFC 554
Query: 470 GFENAMNILPTGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
G + N G +G+ + E S K +VL+ L + T+DKIVL+SNYTQTLD
Sbjct: 555 GAGDDSNKPKGGSRGGRDAGQNVHTEWSGKFIVLERFLHRLHTETNDKIVLISNYTQTLD 614
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANR 587
+FE++ + + Y Y RLDG+M I KR K+V+ FN EF+F+LSSKAGGCG+NLIGANR
Sbjct: 615 IFEKMLRSKKYGYFRLDGTMNIPKRQKLVDQFNNPEGKEFVFLLSSKAGGCGINLIGANR 674
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
L++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+STG+IEEK+ QRQA K+ALSS VVD
Sbjct: 675 LILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQASKQALSSAVVD 734
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCW 706
+ED RHFS+ LR LF E T+ +TH+ KC RC NG Q VK P L D S W
Sbjct: 735 EKEDAERHFSIDSLRQLFLFNEKTLCETHETFKCKRCKNGKQMVKAPAL---LYGDASTW 791
Query: 707 HHVT--EKRWLVDPILKHCWGAG-VSFVF 732
+H T E + D +L+ G VSFVF
Sbjct: 792 NHFTNAELKNNHDDLLRAEVGQPEVSFVF 820
>gi|406603681|emb|CCH44834.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 839
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 318/614 (51%), Positives = 416/614 (67%), Gaps = 31/614 (5%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V V++DP L+ ILRPHQ EGVKF+Y CV+G+ A GCIMADEMGLGKTLQCI LMWTL
Sbjct: 235 VPVIIDPKLTKILRPHQVEGVKFLYRCVSGLVDPRAKGCIMADEMGLGKTLQCIALMWTL 294
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKA--EIDNKLNS 251
L+QGP K IDK I+V PSSLV+NW NE+TKWLG G L IDG S E+ + +
Sbjct: 295 LKQGPRGKKTIDKCIVVCPSSLVRNWANELTKWLGEGAPTPLAIDGKSTKPNEVGSSIQQ 354
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L E+GL+L DEGHRLKN +S T+ +L L
Sbjct: 355 WSLAKGRNVVRPVLIISYETLRRNVENLKNTEIGLLLADEGHRLKNGDSLTFTSLDSLNC 414
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
KRRV+LSGTPIQNDL EYF+L++F N G+LGT EFRK +E PIL+G+D+ A+D E
Sbjct: 415 KRRVILSGTPIQNDLSEYFALLNFANPGLLGTRIEFRKNFEIPILKGRDADATDKEVEDG 474
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
++L L IV++ +IRRT+ +LSKYLP K E V+ + ++ +Q++LY + I S +++ +
Sbjct: 475 QKKLGMLSTIVSKFIIRRTNDILSKYLPCKYEHVIFVNLSPMQEKLYHHFITSPDIKKLL 534
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGK 490
KG +G L +I LKKLCNHPDL+ +D + FE + +++P Y S G
Sbjct: 535 KG-----VGSQPLKAIGLLKKLCNHPDLINLD------EDFEGSDHLIPDDYINSITGGG 583
Query: 491 LLIEL----SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
E+ S K +L+ LA IK ++DKIVL+SNYTQTLDL E++ + Y +RLDG
Sbjct: 584 RNREVQTWQSGKFSILERFLAKIKKESNDKIVLISNYTQTLDLIEKMCRHNHYGNLRLDG 643
Query: 547 SMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+M I KR K+V+ FN S EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA+D QA+A
Sbjct: 644 TMNINKRQKLVDRFNDPESPEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQQALA 703
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK CF+YRF++TGSIEEK+ QRQ+ K +LSSCVVD +DV R FS LR LF
Sbjct: 704 RVWRDGQKKDCFIYRFITTGSIEEKIFQRQSMKMSLSSCVVDENQDVERLFSTDNLRQLF 763
Query: 666 QLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCT--DDLSCWHHVTEK--RWLVDPI 719
Q +NTI DTHD C RC +G Q + SD D + W+H+ K + D +
Sbjct: 764 QFNKNTICDTHDTFHCKRCKKEDGKQT----IRSDVMLYGDATTWNHINHKGLKMTNDHL 819
Query: 720 LKHCWGAG-VSFVF 732
LK+ + +S+VF
Sbjct: 820 LKNEFEFNEISYVF 833
>gi|68467321|ref|XP_722322.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
gi|68467550|ref|XP_722208.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444164|gb|EAL03441.1| hypothetical protein CaO19.5004 [Candida albicans SC5314]
gi|46444289|gb|EAL03565.1| hypothetical protein CaO19.12471 [Candida albicans SC5314]
Length = 848
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 309/590 (52%), Positives = 401/590 (67%), Gaps = 25/590 (4%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQC+TLMWTL
Sbjct: 244 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCLTLMWTL 303
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNS 251
LRQ P K I+K IIV PSSLV+NW NEI KWLG G + L +DG S +E+ L
Sbjct: 304 LRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKNSELGTALQQ 363
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL L+
Sbjct: 364 WSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSLRC 423
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RRV+LSGTPIQNDL EYFSL++F N G LGT EF+K YE IL+G+DS ASD ER K
Sbjct: 424 ERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRIEFKKNYENAILKGRDSTASDEEREKG 483
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+++L +L +V++ +IRRT+ +LSKYLP+K E V+ ++ +QK++Y + I S +++ M
Sbjct: 484 DKKLNELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQKDIYNHFITSPEIKKLM 543
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG-- 489
KG G L +I LKKLCNHPDL+ + E + +P Y +S G
Sbjct: 544 KG-----TGSQPLKAIGMLKKLCNHPDLL-----DLPEDVEGSEEFIPDDYQSSIAGGSA 593
Query: 490 ----KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
++ S K ++L+ L I TDDKIVL+SNYTQTLDL E++ + + Y +RLD
Sbjct: 594 SRNREIQTWFSGKFLILERFLQKINKETDDKIVLISNYTQTLDLIEKMCRYKKYGVLRLD 653
Query: 546 GSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
G+M I KR K+V+ FN + EFIF+LSSKAGGCG+NLIGANRLV+ DPDWNPA+D QA+
Sbjct: 654 GTMNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINLIGANRLVLMDPDWNPASDQQAL 713
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS++ LR L
Sbjct: 714 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSVANLRQL 773
Query: 665 FQLEENTISDTHDKIKCSRCVN--GIQVKPPPLESDCTDDLSCWHHVTEK 712
F+ + +T DTHD C+RC G +K P + D + W+H+ +
Sbjct: 774 FKFQPDTQCDTHDTFNCNRCKGDKGQFIKAPAM---LYGDATTWNHLNHQ 820
>gi|58266612|ref|XP_570462.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21]
gi|134110952|ref|XP_775940.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258606|gb|EAL21293.1| hypothetical protein CNBD3470 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226695|gb|AAW43155.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 818
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 330/713 (46%), Positives = 450/713 (63%), Gaps = 63/713 (8%)
Query: 70 ILAKPFKVPILNYTGGG------YSTKALGVRREGA--RKALHDPTAPNALVLYTP---- 117
+ K F +P++ S +LG RR + LH+P +A+VL+ P
Sbjct: 114 VFTKSFSIPVMYCPKTSEPIIHSLSHASLGARRHPTLIPRPLHNPMDDHAIVLFDPTIDD 173
Query: 118 -------------------------PQLSAHDLLKI-----DKDKIQVHVVVDPVLSNIL 147
P S +L I +K ++V VV+DP LS +L
Sbjct: 174 KPNPEDMKAAEFHEEMKKKEELNKGPHRSLKAILGIVDEKKNKQVVKVPVVIDPRLSKVL 233
Query: 148 RPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLID 206
RPHQ EGVKF+Y C TG+ + A+GCIMADEMGLGKTLQCI L+WTLL+Q P+A KP +
Sbjct: 234 RPHQIEGVKFLYRCTTGLIADGAWGCIMADEMGLGKTLQCIALLWTLLKQSPVAGKPTCE 293
Query: 207 KAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPI 264
K II P+SLV NW NE+ KWLG G V+ + +DG G KAE+ + ++Q +GR P+
Sbjct: 294 KVIIACPTSLVGNWANELVKWLGTGAVSPMVVDGKGGKAELIPAVRRWVQAHGRNVTLPV 353
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
+++SYET R+ L E+GL+L DEGHRLKN E+ T+QAL LK +RRV+L+GTPIQN
Sbjct: 354 MIVSYETLRTLQEELASCEIGLLLADEGHRLKNAETLTFQALTSLKVQRRVILTGTPIQN 413
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL EYF+L++F N LG+ +F+K +E+ ILRG+D+ A++ E+ +++ +L++L G+V++
Sbjct: 414 DLSEYFALLNFANPEYLGSKLDFKKNFESKILRGRDADATEKEKLESDAKLKELGGLVSK 473
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
+IRRT+ LLSKYLPVK E VV + + LQ LY + S V+R ++G ++ L
Sbjct: 474 FIIRRTNDLLSKYLPVKYEHVVFCRPSPLQASLYNLFVTSKDVQRLLRGKDSQ-----PL 528
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
+I L+KL NHPDL+ + + +LP GY + + + S K +VL+
Sbjct: 529 KAIGLLRKLVNHPDLL-----NLPEDLPGSEALLPDGYNGKGRDRTVNCQYSGKFVVLER 583
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-T 563
ML I T+DKIVL+SN TQTLDL E+L + + Y Y+RLDGSM++ KR+K+V FN+
Sbjct: 584 MLDHINHHTNDKIVLISNATQTLDLMEKLCRSKRYGYLRLDGSMSVPKRSKIVAQFNQPE 643
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
S EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA+D QA+ARVWRDGQKK CFVYRF +
Sbjct: 644 SKEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPASDQQALARVWRDGQKKECFVYRFQT 703
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
TG+IEEK+ QRQ K+ LS+CVVD ED ARHF+ +LR LF T+ DTHD KC R
Sbjct: 704 TGTIEEKIFQRQCQKQNLSACVVDEAEDTARHFTQGDLRQLFNFNPETLCDTHDTYKCKR 763
Query: 684 CVNGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKHCWG-AGVSFVF 732
C G Q VK L D S W+H + + D +L+ G VS+VF
Sbjct: 764 CREGKQFVKAQAL---LYGDASTWNHYPNEELGKMHDDLLRAELGLPEVSYVF 813
>gi|255946938|ref|XP_002564236.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591253|emb|CAP97480.1| Pc22g01920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 819
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 343/690 (49%), Positives = 445/690 (64%), Gaps = 71/690 (10%)
Query: 75 FKVPILNYTGGGYST----KALGVRREGAR---KALHDPTAPNALVLYTP---------- 117
F+VP LN G YS+ LG+RR GA K LHDP+ A+VLY P
Sbjct: 109 FQVPFLNKATGEYSSGRVAPTLGMRR-GATFVVKPLHDPSGEFAIVLYDPTVDDVAEEPA 167
Query: 118 -----------PQL-------SAHDLLKIDK---DKIQVHVVVDPVLSNILRPHQREGVK 156
P+L S D+L + K D+ +V VV+DP LS +LRPHQ EGVK
Sbjct: 168 PENQEAPTEDTPKLDEPIVHKSLADILGLKKNVEDRPKVPVVIDPRLSKVLRPHQVEGVK 227
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW-TLLRQGPLAKPLID----KAIIV 211
F+Y CVTG+ ++A GCIMAD MGLGKT+ + TL+ + ID +A++
Sbjct: 228 FLYRCVTGLVDKNANGCIMADGMGLGKTVSLGNPDFRTLVLTNTASMHRIDVDATQAVLR 287
Query: 212 APSSLVKNWCN----EITKWLGGRVAALP--IDG-GSKAEIDNKLNSFMQTYGRRPVNPI 264
+ + C+ + KWLG + A P IDG +KAE+ +++ + GR V P+
Sbjct: 288 SRKNHHSEMCDCMSVKFVKWLG-KDATTPFAIDGKATKAELISQIKQWAIASGRGIVRPV 346
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
L++SYET R +A L+ +GL+LCDEGHRLKN ES T+ AL L RRV+LSGTPIQN
Sbjct: 347 LIVSYETLRMYADTLNDTPIGLLLCDEGHRLKNKESLTWTALNQLNVTRRVILSGTPIQN 406
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL EYF+L+HF N +LG+ EFRK++E PILRG+D+ +DAE+ +ERL++L GIVN+
Sbjct: 407 DLSEYFALLHFANPNLLGSQAEFRKRFELPILRGRDAAGTDAEKKLGDERLQELSGIVNK 466
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
+IRRT+ LLSKYLP+K E VV M++ Q+ LY + IKS ++ ++G G L
Sbjct: 467 FIIRRTNELLSKYLPIKYEHVVFCNMSEFQRGLYNHFIKSPEIQSLLRGK-----GSQPL 521
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMV 501
+I LKKLCNHPDL+ + G E+A P Y+ G+ + S K+MV
Sbjct: 522 KAIGILKKLCNHPDLL--DLANDLPGCEHA---FPEDYSPPDSRGRDRDIKSWYSGKMMV 576
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
LD MLA I+ T+DKIVL+SNYTQTLDLFE+L + RGY +RLDG+M IKKR K+V+TFN
Sbjct: 577 LDRMLARIRQDTNDKIVLISNYTQTLDLFEKLCRSRGYGSLRLDGTMNIKKRTKLVDTFN 636
Query: 562 K-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYR
Sbjct: 637 NPDGQEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYR 696
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
F++TGSIEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + +T SDTHD K
Sbjct: 697 FIATGSIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPDTRSDTHDTFK 756
Query: 681 CSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
C RC +G Q +K P + D S W+H
Sbjct: 757 CKRCRPDGTQYIKAPAM---LYGDTSSWNH 783
>gi|254583686|ref|XP_002497411.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
gi|238940304|emb|CAR28478.1| ZYRO0F04906p [Zygosaccharomyces rouxii]
Length = 848
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 335/734 (45%), Positives = 446/734 (60%), Gaps = 88/734 (11%)
Query: 52 KLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRRE--GARKALHDPTAP 109
+L + +S+ EN +R + F VPI YT LG +++ + LHDPT
Sbjct: 102 RLAQDPQRLSKIENTLR----RSFTVPIKGYTQRHSLPLTLGTKKKVIPEPRPLHDPTDE 157
Query: 110 NALVLYTP---------------PQLSAHDLLKIDKDKIQ-------------------- 134
A+VLY P P S+ + +++Q
Sbjct: 158 FAIVLYDPTVDGDMERNDSLPVAPPSSSDSNSQTQINRVQLMTNGVRNKSLKELLGETET 217
Query: 135 -------VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------ 169
+ VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 218 QSKKFPNIPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDKELVTKGVENTTQEV 277
Query: 170 ---AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW NE+ K
Sbjct: 278 NRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELDK 337
Query: 227 WLG-GRVAALPIDGG----SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
WLG G ++ L IDG + + ++S+ Q GR V P+L+ISYET R + L
Sbjct: 338 WLGPGTLSPLAIDGKKSSLNNGSVSGAIHSWAQAQGRNIVKPVLIISYETLRRNTDQLKN 397
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
VGL+L DEGHRLKN +S T+ +L + RRV+LSGTPIQNDL EYF+L++F N G+L
Sbjct: 398 CNVGLMLADEGHRLKNADSLTFTSLDSIDCSRRVILSGTPIQNDLSEYFALLNFSNPGLL 457
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G+ EFRK +E PIL+ +D+ A+D + K E+L QL +V++ +IRRT+ +L+KYLP K
Sbjct: 458 GSRSEFRKNFEIPILKSRDADATDEDVRKGQEKLSQLSYVVSKFIIRRTNDILAKYLPCK 517
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
E V+ + +T Q+ELY ++S V++ +KG G L +I LKKLCNHPDLV
Sbjct: 518 YEHVIFVNLTPFQRELYKKNVESRDVKKLVKGVG----GTQPLKAIGLLKKLCNHPDLV- 572
Query: 462 DKIQTGADGFENAMNI-LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
+ EN I +P Y + K L ++ S+K +L+ LA I+ +DDKIV++
Sbjct: 573 ----DFNEEIENLDEISIPDDYEWNSKRKDLQVKYSSKFSILERFLAKIRSESDDKIVII 628
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCG 579
SNYTQTLDL E+L + + Y VRLDG+M I KR K+V+ FN EF+F+LSSKAGGCG
Sbjct: 629 SNYTQTLDLIEKLCRQKRYGSVRLDGTMGINKRQKLVDRFNDPEGQEFVFLLSSKAGGCG 688
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STGSIEEK+ QRQ+ K
Sbjct: 689 INLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKL 748
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQVKPPPLESD 698
+LSSCVVD +EDV R FS L+ LFQ + TI +TH+ C RC +G Q+ ++
Sbjct: 749 SLSSCVVDAKEDVERLFSADNLKQLFQFNDKTICETHETYHCKRCNKDGKQMARS--QAM 806
Query: 699 CTDDLSCWHHVTEK 712
D + W+H+ K
Sbjct: 807 LYGDATTWNHLIHK 820
>gi|241950361|ref|XP_002417903.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
gi|223641241|emb|CAX45621.1| SWI/SNF family member, DNA-dependent ATPase, DNA repair and
recombination protein, putative [Candida dubliniensis
CD36]
Length = 839
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/667 (48%), Positives = 425/667 (63%), Gaps = 68/667 (10%)
Query: 101 KALHDPTAPNALVLYTP-----PQL-------------------------------SAHD 124
+ALHDPT+ A+VLY P P++ S +
Sbjct: 158 RALHDPTSEFAIVLYDPTVDKIPKISEVESSSSPEPEPEPEPEQGQRPSKRKRTHKSLAE 217
Query: 125 LLKI---DKDKIQ----VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
+L I ++K+ V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMAD
Sbjct: 218 ILGIVTNPEEKLSKYPDVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMAD 277
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALP 236
EMGLGKTLQC+ LMWTLLRQ P K I+K IIV PSSLV+NW NEI KWLG G + L
Sbjct: 278 EMGLGKTLQCLALMWTLLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGALTPLA 337
Query: 237 IDGGS--KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
+DG S +++ L + GR V P+L+ISYET R + L EVGL+L DEGHR
Sbjct: 338 VDGKSTKSSDLGTALQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHR 397
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN +S T+ AL L+ +RRV+LSGTPIQNDL EYFSL++F N G LGT EFRK YE
Sbjct: 398 LKNGDSLTFTALNSLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNEFRKNYENA 457
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
ILRG+DS A+D ER K +++L +L +V++ +IRRT+ +LSKYLP+K E V+ ++ +Q
Sbjct: 458 ILRGRDSTATDEERAKGDKKLGELSQMVSKFIIRRTNDILSKYLPIKYEYVLFTGLSPMQ 517
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
K LY + I S +++ +KG +G L +I LKKLCNHPDL+ D E +
Sbjct: 518 KTLYNHFITSPEIKKLIKG-----IGSQPLKAIGMLKKLCNHPDLL-----DLPDDIEGS 567
Query: 475 MNILPTGYAASYKSG------KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
+++P Y +S G ++ S K ++L+ L I TDDKIVL+SNYTQTLD
Sbjct: 568 ADLIPDDYQSSIAGGSAGRNREIQTWFSGKFLILERFLRKINKETDDKIVLISNYTQTLD 627
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANR 587
L E++ + + Y +RLDG+M I KR K+V+ FN + EFIF+LSSKAGGCG+NLIGANR
Sbjct: 628 LIEKMCRYKKYGVLRLDGTMNINKRQKLVDKFNDPNGPEFIFLLSSKAGGCGINLIGANR 687
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LV+ DPDWNPA+D QA+ARVWRDGQKK CF+YR +STG+IEEK+ QRQ+ K +LSSCVVD
Sbjct: 688 LVLIDPDWNPASDQQALARVWRDGQKKDCFIYRLISTGTIEEKIFQRQSMKMSLSSCVVD 747
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCTDDLSC 705
+EDV R FS LR LF+ + +T DTHD C+RC G +K P + D +
Sbjct: 748 EKEDVERLFSSENLRQLFKFQPDTECDTHDTFHCNRCKKDKGQFIKAPAM---LYGDATT 804
Query: 706 WHHVTEK 712
W+H+ +
Sbjct: 805 WNHLNHQ 811
>gi|365991713|ref|XP_003672685.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
gi|343771461|emb|CCD27442.1| hypothetical protein NDAI_0K02510 [Naumovozyma dairenensis CBS 421]
Length = 872
Score = 605 bits (1559), Expect = e-170, Method: Compositional matrix adjust.
Identities = 341/727 (46%), Positives = 436/727 (59%), Gaps = 99/727 (13%)
Query: 71 LAKPFKVPILNYTGGGYSTKALGVRRE--GARKALHDPTAPNALVLYTPP---QLSAHD- 124
L K F VPI Y LG +++ + LHDPT A+VLY P ++ HD
Sbjct: 128 LKKSFSVPIKGYIQRHSLPLTLGTKKKITPEPRPLHDPTDEFAIVLYDPSVDGEMIMHDG 187
Query: 125 ---------------------------------------------LL---KIDKDK--IQ 134
LL ++D++K
Sbjct: 188 SHPVNDENDSKKNEKEIEDQKKEIKKKFIHPKIMTNGVRNKSLLELLGTSEVDEEKKFPN 247
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED--------------------AYGCI 174
V VV+DP L+ ILRPHQ EGVKF+Y CVTG+ ++D AYGCI
Sbjct: 248 VPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAETVNTGIVAPQQNNRGAYGCI 307
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVA 233
MADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW NE+ KWLG ++
Sbjct: 308 MADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLS 367
Query: 234 ALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
L IDG + + S+ Q GR V P+L+ISYET R + L +VGL+
Sbjct: 368 PLAIDGKKSSLASGSTTVAEAIKSWGQAKGRNIVKPVLIISYETLRRNVDQLQNCDVGLM 427
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L++F N G+LGT EF
Sbjct: 428 LADEGHRLKNADSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRSEF 487
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
RK +E PILR +D+ ++D E K E+L++L IV++ +IRRT+ +LSKYLP K E V+
Sbjct: 488 RKNFEIPILRSRDADSTDDEIKKGEEQLQKLSDIVSKFIIRRTNDILSKYLPCKYEHVIF 547
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
+ + QK +Y NLIKS +++ MKG T+ L +I LKKLCNHP L+ +
Sbjct: 548 VDLKPFQKNVYQNLIKSRDIKKMMKGVGGTQ----PLKAIGVLKKLCNHPSLL--NLDEE 601
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
D F+N +P+ Y S S + + S K +L+ L IK +DDKIVL+SNYTQTL
Sbjct: 602 LDNFDNLE--IPSDYNMSSNSRDIQPKYSGKFSILERFLHKIKTESDDKIVLISNYTQTL 659
Query: 528 DLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGAN 586
DL E++ + + Y +RLDG+M I KR K+V+ FN EFIF+LSSKAGGCG+NLIGAN
Sbjct: 660 DLIEKMCRTKHYGSLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGAN 719
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
RL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STGSIEEK+ QRQ+ K +LSSCVV
Sbjct: 720 RLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKMSLSSCVV 779
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN-GIQVKPPPLESDCT--DDL 703
D +EDV R FS LR LFQ + TI +TH+ C RC G Q + SD D
Sbjct: 780 DAKEDVERLFSADNLRQLFQYNDKTICETHETYHCKRCNKAGKQT----IRSDAMLYGDP 835
Query: 704 SCWHHVT 710
+ W+H+
Sbjct: 836 TTWNHLN 842
>gi|258568006|ref|XP_002584747.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii
1704]
gi|237906193|gb|EEP80594.1| DNA repair and recombination protein RAD54 [Uncinocarpus reesii
1704]
Length = 1534
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/654 (49%), Positives = 420/654 (64%), Gaps = 64/654 (9%)
Query: 96 REGAR---KALHDPTAPNALVLYTP----------------------PQL-------SAH 123
R GA K LHDP+ ++VLY P P+L S
Sbjct: 2 RRGATFVVKPLHDPSGEFSIVLYDPTVDEKPEVKQGNDQKKDEEPSKPKLDEPLIHKSLA 61
Query: 124 DLLKIDK---DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
++L I K ++ +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ +A+GCIMADEMG
Sbjct: 62 EILGIKKNVEERPKVPVVIDPKLAKVLRPHQVEGVKFLYRCTTGLVDPNAHGCIMADEMG 121
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG 239
LGKT K + K +I P++LV NW NE+ KWLG + IDG
Sbjct: 122 LGKT------------SAEAGKSTLQKVVIACPATLVGNWANELVKWLGKDAIHPFVIDG 169
Query: 240 -GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
SKAE+ +L + GR+ V P+L++SYET R + L + +GL+LCDEGHRLKN
Sbjct: 170 KASKAELTLQLRQWAIASGRQVVRPVLIVSYETLRLNVGELAETPIGLLLCDEGHRLKNG 229
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+SQT+ AL GL RRVLLSGTPIQNDL EY+SL++F N G+LG+ EF K++E PILRG
Sbjct: 230 DSQTFTALNGLNVARRVLLSGTPIQNDLSEYYSLLNFTNPGLLGSRSEFHKRFEMPILRG 289
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+D+ ++ ER K +E L +L+GIVN+ +IRR++ +LSKYLPVK E VV + Q +LY
Sbjct: 290 RDADGTEEERKKGDECLAELLGIVNKFIIRRSNDILSKYLPVKYEHVVFCNLAPFQVDLY 349
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MDKIQTGADGFENAMNI 477
+ I+S ++ ++G G L +I LKKLCNHPDL+ + G + F +
Sbjct: 350 NHFIQSPDIKSLLRGK-----GSQPLKAIGILKKLCNHPDLLNLSADLPGCEQFFPDDFV 404
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
P G + + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R
Sbjct: 405 PPEGRG---RDRDVKSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRSR 461
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY +RLDG+M +KKR K+V+ FN EF+F+LSSKAGGCG+NL+GANRLV+FDPDWN
Sbjct: 462 GYGSLRLDGTMNVKKRQKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWN 521
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PA D QA+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ+HK+ LSSCVVD EDV RHF
Sbjct: 522 PAADQQALARVWRDGQKKDCFVYRFIATGSIEEKIFQRQSHKQLLSSCVVDSAEDVERHF 581
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
S+ LR LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 582 SLGSLRELFQFKPQTTSDTHDTFKCKRCRPDGTQFIKAPAM---LYGDTSTWNH 632
>gi|308198272|ref|XP_001386950.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
gi|149388940|gb|EAZ62927.2| protein required for X-ray damage repair, mitotic recombination,
and full meiotic recombination. mRNA increases in
meiosis [Scheffersomyces stipitis CBS 6054]
Length = 821
Score = 603 bits (1555), Expect = e-169, Method: Compositional matrix adjust.
Identities = 309/585 (52%), Positives = 399/585 (68%), Gaps = 22/585 (3%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQCI LMWTL
Sbjct: 220 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLIDARAKGCIMADEMGLGKTLQCIALMWTL 279
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNS 251
L+Q P K I+K IIV PSSLV+NW NEI KWLG G + L +DG S +E+ L
Sbjct: 280 LKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKNSELGGALQQ 339
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL L+
Sbjct: 340 WSVARGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSLRC 399
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RRV+LSGTPIQNDL EYFSL++F N G LGT +F+K +E IL+G+D+ A+D ER
Sbjct: 400 ERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKKNFENKILKGRDAIATDKEREVG 459
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+E+L +L +V++ +IRRT+ +LSKYLPVK E V+ ++ +QK+LY + I S +++ +
Sbjct: 460 DEKLAELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKDLYRHFITSPEIKKLL 519
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
KG +G L +I LKKLCNHPDL+ D FE + +P Y +S SG
Sbjct: 520 KG-----VGSQPLKAIGMLKKLCNHPDLL-----NLPDDFEGSEKFIPEDYCSSIGSGGR 569
Query: 492 LIEL----SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
E+ S K M+L+ L I+ T+DKIVL+SNYTQTLDL ER+ + + Y +RLDG+
Sbjct: 570 NREVQSWYSGKFMILERFLYQIRSQTNDKIVLISNYTQTLDLIERMCRHKKYGSLRLDGT 629
Query: 548 MTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
++I KR K+V+ FN NEFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+AR
Sbjct: 630 LSINKRQKLVDKFNDPEGNEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALAR 689
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
VWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR LF
Sbjct: 690 VWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSADNLRQLFM 749
Query: 667 LEENTISDTHDKIKCSRCV-NGIQVKPPPLESDCTDDLSCWHHVT 710
+ +T DTHD C RC +G + K P + D + W+H+
Sbjct: 750 YQPDTNCDTHDTYNCKRCTKDGQKQKAPAM---LYGDATTWNHIN 791
>gi|403166558|ref|XP_003889973.1| DNA repair and recombination protein RAD54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375166302|gb|EHS63112.1| DNA repair and recombination protein RAD54 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 1049
Score = 602 bits (1552), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/675 (49%), Positives = 425/675 (62%), Gaps = 65/675 (9%)
Query: 88 STKALGVRREG--ARKALHDPTAPNALVLYTP---------------------------- 117
S LG R + A + LHDP A A+VL+ P
Sbjct: 358 SGMPLGARPQPIFAPRPLHDPLADTAIVLWDPTVDDRPAPKPVGEGDPERTAAEIEAEQT 417
Query: 118 -----------PQLSAHDLLKIDK-----DKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
P S DLL I K D +V VV+DP LS LRPHQ EGVKF+Y C
Sbjct: 418 RLKLELERQKGPHKSLPDLLGIKKPGDPKDIKKVPVVLDPRLSKTLRPHQVEGVKFLYRC 477
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNW 220
TG+ + A GCIMADEMGLGKTLQCITL+WTLL+Q P+A KP I+KAI+ PSSLVKNW
Sbjct: 478 ATGMVEQGAKGCIMADEMGLGKTLQCITLLWTLLKQSPIAGKPSIEKAIVACPSSLVKNW 537
Query: 221 CNEITKWLG-GRVAALPIDGG-SKAEIDNKLNSFMQTYGRRPVNPILVISYETFR-SHAS 277
NE KWLG G + L +DG +KA + + ++ GRR P++++SYET R +
Sbjct: 538 ANEFDKWLGPGAINPLAVDGKQTKANLLTSVRQWVSATGRRVPQPVMIVSYETLRGTLVE 597
Query: 278 VLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
L + VGL+LCDEGHRLKN ++QTY AL G+ +RRV+L+GTPIQNDL EYF+L++F N
Sbjct: 598 ELGRTPVGLLLCDEGHRLKNADNQTYAALNGINCERRVILTGTPIQNDLSEYFALLNFAN 657
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
LG +FRK YE PILRG+DS +S++E A +L++L V + +IRRT+ LLSKY
Sbjct: 658 PNYLGDRAQFRKSYELPILRGRDSDSSESEVALAEAKLKELTTKVQKFIIRRTNDLLSKY 717
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LPVK E VV + Q +LY + I S +++ ++G +G L + L+KLCNHP
Sbjct: 718 LPVKYEHVVFCAPSAFQLDLYRHFIDSPDLQKLLRG-----VGCQPLKMLGILRKLCNHP 772
Query: 458 DLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
DL+ +Q G E P GY + ELS K+ VL+ L IK T DKI
Sbjct: 773 DLL--DLQQDIPGSEK---YFPDGYRSKDPRAPARPELSGKMTVLERFLHKIKTETTDKI 827
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAG 576
VL+SN+TQTLD+ E++ + R + +RLDG+M I KR K+V+ FN EFIF+LSSKAG
Sbjct: 828 VLISNFTQTLDVMEKMCRERRWGNLRLDGTMQITKRQKLVDRFNDPEGKEFIFLLSSKAG 887
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCG+NLIGANRL++FDPDWNPA+D QA+ARVWRDGQKK CFVYRF+ TGS+EEK+ QRQ+
Sbjct: 888 GCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKNCFVYRFILTGSVEEKVFQRQS 947
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPL 695
K LS+ VVD +ED AR FS L+ LF+L ENT SDTHD KC RC +G Q VK P +
Sbjct: 948 QKMKLSASVVDEQEDEARMFSRESLKELFRLNENTQSDTHDVYKCKRCRDGKQIVKAPAM 1007
Query: 696 ESDCTDDLSCWHHVT 710
D S W+H T
Sbjct: 1008 ---LYGDQSTWNHYT 1019
>gi|154277928|ref|XP_001539795.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
NAm1]
gi|150413380|gb|EDN08763.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
NAm1]
Length = 684
Score = 601 bits (1550), Expect = e-169, Method: Compositional matrix adjust.
Identities = 330/670 (49%), Positives = 416/670 (62%), Gaps = 93/670 (13%)
Query: 101 KALHDPTAPNALVLYTP---------------------------PQLSA-------HDLL 126
K LHDP+ A+VLY P P+L A D+L
Sbjct: 10 KPLHDPSGDFAIVLYDPTIDDKPVNPNDANDGNGKGEEKEKNDPPKLDAPLVHKSLADIL 69
Query: 127 KIDK---DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
I K + +V VV+DP L+ +LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGK
Sbjct: 70 GIKKKVDGRPKVPVVIDPKLAKVLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGK 129
Query: 184 T-------------------LQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNE 223
T LQCITL+WTLL+Q P A K I K II PS+LVKNW NE
Sbjct: 130 TVGSNEFSRWSHGAKYLYFQLQCITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANE 189
Query: 224 ITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
KWLG G V +DG SK E+ ++L + + GR V P+L++SYET R + L
Sbjct: 190 FVKWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKD 249
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
+GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL EYFSL++F N IL
Sbjct: 250 TPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNIL 309
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
GT EF K+YE PILRG+D+ SD +R + +E + +L+ +VN+ +IRRT+ +LSKYLPVK
Sbjct: 310 GTRNEFHKKYEMPILRGRDADGSDEDRKRGDECVTELLNVVNKFIIRRTNDILSKYLPVK 369
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
E VV ++ Q +LY + I+S ++ ++G G L +I LKKLCNHPDL
Sbjct: 370 YEHVVFCRLAPFQTDLYNHFIQSPDIKSLLRGK-----GSQPLKAIGILKKLCNHPDL-- 422
Query: 462 DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
+ GAD + ILP Y + G+ + T+DKIVL+S
Sbjct: 423 --LNLGAD-LPGSEQILPDDYVSLESRGR------------------DRDDTNDKIVLIS 461
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGL 580
NYTQTLDLFERL + R Y +RLDG+M + KR K+V+ FN EF+F+LSSKAGGCG+
Sbjct: 462 NYTQTLDLFERLCRTRRYGCLRLDGTMNVTKRQKLVDKFNDPNGEEFVFLLSSKAGGCGI 521
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++
Sbjct: 522 NLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQS 581
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESD 698
LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +G Q + P +
Sbjct: 582 LSSCVVDSAEDVERHFSLDSLRELFQFKPETRSDTHDTFKCKRCRPDGTQHINAPAM--- 638
Query: 699 CTDDLSCWHH 708
D S W+H
Sbjct: 639 LYGDTSSWNH 648
>gi|331227507|ref|XP_003326422.1| ISWI chromatin-remodeling complex ATPase ISW2 [Puccinia graminis f.
sp. tritici CRL 75-36-700-3]
Length = 939
Score = 600 bits (1547), Expect = e-169, Method: Compositional matrix adjust.
Identities = 333/675 (49%), Positives = 425/675 (62%), Gaps = 65/675 (9%)
Query: 88 STKALGVRREG--ARKALHDPTAPNALVLYTP---------------------------- 117
S LG R + A + LHDP A A+VL+ P
Sbjct: 248 SGMPLGARPQPIFAPRPLHDPLADTAIVLWDPTVDDRPAPKPVGEGDPERTAAEIEAEQT 307
Query: 118 -----------PQLSAHDLLKIDK-----DKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
P S DLL I K D +V VV+DP LS LRPHQ EGVKF+Y C
Sbjct: 308 RLKLELERQKGPHKSLPDLLGIKKPGDPKDIKKVPVVLDPRLSKTLRPHQVEGVKFLYRC 367
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNW 220
TG+ + A GCIMADEMGLGKTLQCITL+WTLL+Q P+A KP I+KAI+ PSSLVKNW
Sbjct: 368 ATGMVEQGAKGCIMADEMGLGKTLQCITLLWTLLKQSPIAGKPSIEKAIVACPSSLVKNW 427
Query: 221 CNEITKWLG-GRVAALPIDGG-SKAEIDNKLNSFMQTYGRRPVNPILVISYETFR-SHAS 277
NE KWLG G + L +DG +KA + + ++ GRR P++++SYET R +
Sbjct: 428 ANEFDKWLGPGAINPLAVDGKQTKANLLTSVRQWVSATGRRVPQPVMIVSYETLRGTLVE 487
Query: 278 VLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
L + VGL+LCDEGHRLKN ++QTY AL G+ +RRV+L+GTPIQNDL EYF+L++F N
Sbjct: 488 ELGRTPVGLLLCDEGHRLKNADNQTYAALNGINCERRVILTGTPIQNDLSEYFALLNFAN 547
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
LG +FRK YE PILRG+DS +S++E A +L++L V + +IRRT+ LLSKY
Sbjct: 548 PNYLGDRAQFRKSYELPILRGRDSDSSESEVALAEAKLKELTTKVQKFIIRRTNDLLSKY 607
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LPVK E VV + Q +LY + I S +++ ++G +G L + L+KLCNHP
Sbjct: 608 LPVKYEHVVFCAPSAFQLDLYRHFIDSPDLQKLLRG-----VGCQPLKMLGILRKLCNHP 662
Query: 458 DLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
DL+ +Q G E P GY + ELS K+ VL+ L IK T DKI
Sbjct: 663 DLL--DLQQDIPGSEK---YFPDGYRSKDPRAPARPELSGKMTVLERFLHKIKTETTDKI 717
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAG 576
VL+SN+TQTLD+ E++ + R + +RLDG+M I KR K+V+ FN EFIF+LSSKAG
Sbjct: 718 VLISNFTQTLDVMEKMCRERRWGNLRLDGTMQITKRQKLVDRFNDPEGKEFIFLLSSKAG 777
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCG+NLIGANRL++FDPDWNPA+D QA+ARVWRDGQKK CFVYRF+ TGS+EEK+ QRQ+
Sbjct: 778 GCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKNCFVYRFILTGSVEEKVFQRQS 837
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPL 695
K LS+ VVD +ED AR FS L+ LF+L ENT SDTHD KC RC +G Q VK P +
Sbjct: 838 QKMKLSASVVDEQEDEARMFSRESLKELFRLNENTQSDTHDVYKCKRCRDGKQIVKAPAM 897
Query: 696 ESDCTDDLSCWHHVT 710
D S W+H T
Sbjct: 898 ---LYGDQSTWNHYT 909
>gi|149239498|ref|XP_001525625.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146451118|gb|EDK45374.1| DNA repair and recombination protein RAD54 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 875
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 310/595 (52%), Positives = 400/595 (67%), Gaps = 30/595 (5%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
V VV+DP L+ ILRPHQ GVKF+Y C G++ A GCIMADEMGLGKTLQC+TLMWT
Sbjct: 269 NVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLQDPRAKGCIMADEMGLGKTLQCLTLMWT 328
Query: 194 LLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSF 252
LLRQ P K I+K IIV PSSLV+NW NEI KWLG G + L +DG K+ N L
Sbjct: 329 LLRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDG--KSTKSNDLGLA 386
Query: 253 MQTY----GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
+Q + GR V P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL
Sbjct: 387 LQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNS 446
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L+ +RRV+LSGTPIQNDL EYFSL++F N G LGT +FR+ +E ILRG+D+ A+D ER
Sbjct: 447 LRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRRNFENAILRGRDADATDKER 506
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
K +++L +L +V++ +IRRT+ +LSKYLPVK E V+ + +QK+LY + I S ++
Sbjct: 507 EKGDQKLSELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLAPMQKKLYHHFITSPEIK 566
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY-- 486
+ +KG +G L +I LKKLCNHPDL+ D E +++P Y +S
Sbjct: 567 KLLKG-----IGSQPLKAIGMLKKLCNHPDLL-----NLPDDIEGCDDLIPEDYVSSIHG 616
Query: 487 -----KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
++ ++ S K VL+ L IK T+DKIVL+SNYTQTLDL E++ + + Y
Sbjct: 617 HGGGGRNREIQTWFSGKFQVLERFLHKIKRETNDKIVLISNYTQTLDLIEKMCRYKKYGA 676
Query: 542 VRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
+RLDG+M I KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRLV+ DPDWNPA+D
Sbjct: 677 LRLDGTMNINKRQKLVDRFNDPDGAEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPASD 736
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS
Sbjct: 737 QQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSADN 796
Query: 661 LRSLFQLEENTISDTHDKIKCSRC--VNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
LR LF + +T DTHD C RC G +K P + D + W+H+ R
Sbjct: 797 LRQLFLFQPDTECDTHDTYNCKRCHKDKGQTIKAPAM---LYGDATTWNHIKHDR 848
>gi|366987377|ref|XP_003673455.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
gi|342299318|emb|CCC67069.1| hypothetical protein NCAS_0A05110 [Naumovozyma castellii CBS 4309]
Length = 875
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 309/579 (53%), Positives = 393/579 (67%), Gaps = 37/579 (6%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED--------------------AYGCI 174
V VV+DP L+ ILRPHQ EGVKF+Y CVTG+ ++D AYGCI
Sbjct: 250 VPVVIDPKLTKILRPHQVEGVKFLYRCVTGLVMKDFLDAEAVNTGIVKTEQNNRGAYGCI 309
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVA 233
MADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW NE+ KWLG G ++
Sbjct: 310 MADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELVKWLGPGTLS 369
Query: 234 ALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
L +DG + + ++S+ Q GR V P+L+ISYET R + L +VGL+
Sbjct: 370 PLAVDGKKSSLASGNSTVAEAVHSWAQATGRNIVKPVLIISYETLRRNVDQLRNCDVGLM 429
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L++F N G+LGT EF
Sbjct: 430 LADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRSEF 489
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
RK +E PILR +D+ ++D E TK E+L++L IV++ +IRRT+ +LSKYLP K E V+
Sbjct: 490 RKNFELPILRSRDADSTDEEITKGEEQLQKLSTIVSKFIIRRTNDILSKYLPCKYEHVIF 549
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
+ + QK++Y L+KS V + +KG T+ L +I LKKLCNHP+L+ +
Sbjct: 550 VNLKPFQKDVYHRLLKSRDVNKMVKGVGGTQ----PLKAIGVLKKLCNHPNLI--NLDEE 603
Query: 468 ADGFENAMNILPTGY-AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
D F++ +P Y KS + + S K +L+ L IK +DDKIVL+SNYTQT
Sbjct: 604 IDDFDDLE--IPDEYNMQGSKSRDVQPQFSGKFAILERFLHKIKTESDDKIVLISNYTQT 661
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGA 585
LDL E++ + + Y VRLDG+MTI KR K+V+ FN EFIF+LSSKAGGCG+NLIGA
Sbjct: 662 LDLIEKMCRNKHYSSVRLDGTMTINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGA 721
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STGSIEEK+ QRQ+ K +LSSCV
Sbjct: 722 NRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGSIEEKIYQRQSMKMSLSSCV 781
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
VD +EDV R FS LR LFQ + TI +TH+ C RC
Sbjct: 782 VDAKEDVERLFSSDNLRQLFQYNDKTICETHETYHCKRC 820
>gi|320581998|gb|EFW96217.1| DNA-dependent ATPase [Ogataea parapolymorpha DL-1]
Length = 828
Score = 599 bits (1545), Expect = e-168, Method: Compositional matrix adjust.
Identities = 339/733 (46%), Positives = 442/733 (60%), Gaps = 76/733 (10%)
Query: 39 PLGSVDNEDEP----NSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYS------ 88
P GS ++DE K + + + +IL + FK P+ + Y
Sbjct: 79 PFGSTKDDDEQYGLNKKKGALLPRNVLSSMDETNKILTRKFKAPVKSGADNEYELMNAQP 138
Query: 89 TKALGVRRE--GARKALHDPTAPNALVLYTP----------------------------- 117
LG R+ K LHDP A+VLY P
Sbjct: 139 PPPLGNRKRLYFPPKPLHDPLGEYAIVLYDPTVDVIPGMKEEEEAALAAAKAAAAAEEPQ 198
Query: 118 -PQLSAHDLL------------KIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
P SAH L ++ K V VV+DP L+ ILRPHQ GVKF+Y C G
Sbjct: 199 KPAKSAHKSLNEILGISTRPEEEVMKQFPNVPVVIDPKLAKILRPHQVAGVKFLYRCTAG 258
Query: 165 VRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEI 224
+ A GCIMADEMGLGKTLQC+TLMWTLLRQGP K I+K +IV PSSLVKNW NEI
Sbjct: 259 LVDARAKGCIMADEMGLGKTLQCLTLMWTLLRQGPRGKKTIEKCVIVCPSSLVKNWANEI 318
Query: 225 TKWLG-GRVAALPIDG-GSKAEID--NKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
KWLG G + +L +DG GSK D L + + GR V P+L+ISYET R + L
Sbjct: 319 DKWLGKGTLNSLAMDGKGSKGAGDMAEVLRQWARAKGRSIVRPVLIISYETLRRNVENLE 378
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
E+GL+L DEGHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYFSL++F N G+
Sbjct: 379 GTEIGLILADEGHRLKNGDSLTFTALNSLNCERRVILSGTPIQNDLSEYFSLLNFSNPGV 438
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG+ +FRK YE ILRG+DS A++ ER K +E+L++L +V+R +IRRT+ +LSKYLPV
Sbjct: 439 LGSRAQFRKNYELDILRGRDSLATEEERKKGDEKLQELTELVSRFIIRRTNDILSKYLPV 498
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K E VV +++LQ +LY + + S + + ++G LG L +I L+KLC HP L+
Sbjct: 499 KYEYVVFCNLSELQSKLYRHFVTSPEINKLIRG-----LGSQPLKAIGLLRKLCTHPRLL 553
Query: 461 MDKIQTGADGFENAMNILPTGYA-ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ G E NILP Y + ++ + S K +L+ L I+ TDDKIVL
Sbjct: 554 --DLPNDISGSE---NILPDDYDFGNGRNKDVQTWYSGKFAMLERFLFKIRKETDDKIVL 608
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGC 578
+SN+TQTLDL E+L + + VRLDGS+ I KR K+V+ FN ++EF+F+LSSKAGGC
Sbjct: 609 ISNFTQTLDLIEKLCRHHRFGTVRLDGSLGINKRQKLVDRFNDPNADEFVFLLSSKAGGC 668
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGANRL++ DPDWNPA+D QA+ARVWRDGQKK CF+YRF++TG+IEEK+ QRQ+ K
Sbjct: 669 GINLIGANRLILLDPDWNPASDQQALARVWRDGQKKNCFIYRFIATGTIEEKIFQRQSAK 728
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESD 698
LS+CVVD EDV R FS L+ LF + T +THD KC RC NG Q L+S
Sbjct: 729 MELSTCVVDSNEDVERQFSSENLKQLFLYNDQTPCETHDTYKCKRCQNGKQ----KLKSA 784
Query: 699 CT--DDLSCWHHV 709
D + W+H+
Sbjct: 785 AMLYGDATTWNHI 797
>gi|255728815|ref|XP_002549333.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
gi|240133649|gb|EER33205.1| DNA repair and recombination protein RAD54 [Candida tropicalis
MYA-3404]
Length = 847
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 306/593 (51%), Positives = 402/593 (67%), Gaps = 28/593 (4%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQC+TLMWTL
Sbjct: 240 VPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDAKAKGCIMADEMGLGKTLQCLTLMWTL 299
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNS 251
LRQ P K IDK IIV PSSLV+NW NEI KWLG G + L +DG S +++ L
Sbjct: 300 LRQSPRGKKTIDKCIIVCPSSLVRNWANEIVKWLGEGALTPLAVDGKSTKSSDLGTALQQ 359
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L EVGL+L DEGHRLKN ES T+ AL L+
Sbjct: 360 WASAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGESLTFTALNSLRC 419
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RRV+LSGTPIQNDL EYF+L++F N G LGT EF+K +E ILRG+D+ A++ ER K
Sbjct: 420 ERRVILSGTPIQNDLSEYFALLNFANPGYLGTRNEFKKNFENAILRGRDADATEKEREKG 479
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+++L +L +V++ +IRRT+ +LSKYLPVK E V+ ++ +QK LY++ I S +++ +
Sbjct: 480 DQKLVELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKSLYSHFINSPDMKKLI 539
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS------ 485
+G +G L +I LKKLC+HPDL+ D E +++P Y +S
Sbjct: 540 RG-----IGSQPLKAIGLLKKLCSHPDLL-----DLPDDIEGCDHLIPDDYESSISHNGG 589
Query: 486 ---YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
+++ ++ S K M+L+ L IK T+DKIVL+SNYTQTLDL E++ + + Y +
Sbjct: 590 RGGFRNSEVQTWFSVKFMILERFLHKIKKETNDKIVLISNYTQTLDLIEKMCRNKKYGVL 649
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDG+++I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRLV+ DPDWNPA+D
Sbjct: 650 RLDGTLSINKRQKLVDKFNNPDGSEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPASDQ 709
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K LSSCVVD +EDV R FS L
Sbjct: 710 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLQLSSCVVDEKEDVDRLFSSDNL 769
Query: 662 RSLFQLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCTDDLSCWHHVTEK 712
R LF+ +T DTHD C RC G +K P + D + W+H+ K
Sbjct: 770 RKLFEFNPDTSCDTHDTYNCKRCKRDKGQFIKAPAM---LYGDSTTWNHLNHK 819
>gi|388581680|gb|EIM21987.1| DNA supercoiling [Wallemia sebi CBS 633.66]
Length = 806
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 329/685 (48%), Positives = 433/685 (63%), Gaps = 57/685 (8%)
Query: 70 ILAKPFKVPILNYTGGG------YSTKALGVRREGARKA--LHDPTAPNALVLYTP---- 117
+L + FK+P + G S ALG R + LHDP A +A+VLY P
Sbjct: 105 VLGQGFKIPPMKDKATGRQVIIPLSGMALGTRIQPPIPPRPLHDPMAEHAIVLYDPTIDD 164
Query: 118 -------PQL----------SAHDLLKI------DKDKIQVHVVVDPVLSNILRPHQREG 154
P + S D+L I +KD +V VV+DP+LS +LRPHQ EG
Sbjct: 165 IEEKKEEPAIPKPPVDRRNRSVKDILGIKSREELEKDVKKVPVVIDPILSKVLRPHQVEG 224
Query: 155 VKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAP 213
VKF+Y C TG+ DA GCIMADEMGLGKTLQCI L+WTLL+Q P+ KP ++K IIV P
Sbjct: 225 VKFLYRCTTGLTAPDAQGCIMADEMGLGKTLQCIALLWTLLKQSPIPGKPTVEKCIIVCP 284
Query: 214 SSLVKNWCNEITKWLG-GRVAALPID-GGSKAEIDNKLNSFMQTYGRRPVNPILVISYET 271
SSLV NW NE TKWLG G V + +D G+K ++ + + + GR P++++SYET
Sbjct: 285 SSLVPNWANEFTKWLGTGAVGCMAVDHKGTKEQLISDVKQWCAASGRSVTQPVMIVSYET 344
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
R+ V+ + +VGL++ DEGHR+KN ES T++AL + KRRV+LSGTPIQNDL EYFS
Sbjct: 345 LRNLTEVIGRAQVGLMMLDEGHRMKNSESMTFKALTEIHCKRRVILSGTPIQNDLSEYFS 404
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
L++F N LG EFRK +E ILRG+D+ A+D E+ + E+L++L V++ +IRRT+
Sbjct: 405 LLNFANPDYLGNKNEFRKNFENIILRGRDALATDKEKQMSEEKLKELNMAVSKFIIRRTN 464
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+LSK+LPVK E VV ++ LQ +LY I+S + +KG + L +I LK
Sbjct: 465 DILSKFLPVKYEHVVFTALSPLQLDLYKFFIESPETQALLKGKAS-----QPLKAIGILK 519
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE--LSAKLMVLDTMLAVI 509
KLCNHP+L+ K D + +LP A K S K+MVL + +
Sbjct: 520 KLCNHPNLISPK-----DDIPGSKVLLPEENIAERLDKKRPANPAWSGKMMVLMRFIERM 574
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFI 568
+ +DDKIVLVSNYTQTLDL E+L + ++RLDG+M +KKR K+V+ FN S EFI
Sbjct: 575 RKNSDDKIVLVSNYTQTLDLLEKLFAALRWGFMRLDGTMAVKKRGKLVDRFNDPESREFI 634
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGGCGLNLIGANRL++FDPDWNPA D QA+ARVWRDGQKK CFVYRF+ TG++E
Sbjct: 635 FLLSSKAGGCGLNLIGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFIGTGTLE 694
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC--VN 686
E+++ RQA+K++LS+CVVD ED RHFS LR LF+ T S HD KC RC
Sbjct: 695 EQVLMRQAYKQSLSACVVDEAEDADRHFSKDLLRELFKHYPGTDSHMHDTFKCKRCDKAT 754
Query: 687 GIQ-VKPPPLESDCTDDLSCWHHVT 710
G Q VK P L D+S W+H +
Sbjct: 755 GKQIVKAPAL---LYGDVSTWNHYS 776
>gi|401625828|gb|EJS43818.1| rad54p [Saccharomyces arboricola H-6]
Length = 907
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 318/636 (50%), Positives = 406/636 (63%), Gaps = 56/636 (8%)
Query: 122 AHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------ 169
+ D+ + K V VV+DP L ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 253 SEDVAESKKKFANVPVVIDPKLVKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSA 312
Query: 170 ------------------------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LI
Sbjct: 313 SEDPLKSDEKALTQSRKTEENNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLI 372
Query: 206 DKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGR 258
DK IIV PSSLV NW NE+ KWLG + L +DG G+ + ++++ QT GR
Sbjct: 373 DKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGANITVSQAIHTWAQTQGR 432
Query: 259 RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
V P+L+ISYET R + L + VGL+L DEGHRLKN +S T+ AL + RRV+LS
Sbjct: 433 NIVKPVLIISYETLRRNVDQLKNSNVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILS 492
Query: 319 GTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
GTPIQNDL EYF+L+ F N G+LG+ EFRK +E PILRG+D+ A+D E K +L++L
Sbjct: 493 GTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEIAKGEVQLQKL 552
Query: 379 IGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTK 438
IV++ +IRRT+ +LSKYLP K E V+ + + LQ LY L+KS V++ +KG
Sbjct: 553 STIVSKFIIRRTNDILSKYLPCKYEHVIFVNLKPLQNSLYNKLLKSREVKKVVKGIG--- 609
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA-ASYKSGKLLIELSA 497
G L +I LKKLCNHP+L + + + LP Y+ S K+ + + SA
Sbjct: 610 -GSQPLRAIGILKKLCNHPNL----LNFEDEFDDEDDLELPDDYSMPSSKARDVQTKYSA 664
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
K +L+ L I +DDKIVL+SNYTQTLDL ER+ + + Y VRLDG+MTI KR K+V
Sbjct: 665 KFAILERFLHKINTESDDKIVLISNYTQTLDLIERMCRYKHYSAVRLDGTMTINKRQKLV 724
Query: 558 ETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
+ FN EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK C
Sbjct: 725 DRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDC 784
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
F+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH
Sbjct: 785 FIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETH 844
Query: 677 DKIKCSRC-VNGIQVKPPPLESDCTDDLSCWHHVTE 711
+ C RC G Q+K P + D + W+H+
Sbjct: 845 ETYHCKRCNAQGKQLKRAP--AMLYGDATSWNHLNH 878
>gi|344302287|gb|EGW32592.1| hypothetical protein SPAPADRAFT_51134 [Spathaspora passalidarum
NRRL Y-27907]
Length = 831
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 308/587 (52%), Positives = 397/587 (67%), Gaps = 27/587 (4%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQC+ LMWTL
Sbjct: 228 VPVVIDPKLAKILRPHQVAGVKFLYRCTAGLIDPRAKGCIMADEMGLGKTLQCLALMWTL 287
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
LRQ P K I+K IIV PSSLV+NW NEI KWLG G + L +DG K+ N L +
Sbjct: 288 LRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDG--KSTKSNDLGLAL 345
Query: 254 QTY----GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
Q + GR V P+L++SYET R + L EVGL+L DEGHRLKN +S T+ AL L
Sbjct: 346 QQWSTATGRNVVRPVLIVSYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALNSL 405
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
K +RRV+LSGTPIQNDL EYFSL++F N G LGT +F++ +E ILRG+D+ A+D ER
Sbjct: 406 KCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFKRNFENVILRGRDADATDKERA 465
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K++E+L +L +V++ +IRRT+ +LSKYLPVK E V+ ++ +Q LY I S +++
Sbjct: 466 KSDEKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQSALYNYFITSPEIKK 525
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA----AS 485
++G G L +I LKKLCNHPDL+ D E ++P Y+ AS
Sbjct: 526 LLRG-----TGSQPLKAIGLLKKLCNHPDLL-----NLPDDIEGCEELIPEDYSSSIGAS 575
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
++ ++ S K M+L+ L I T+DKIVL+SNYTQTLDL E++ + + Y +RLD
Sbjct: 576 GRNREIQTWFSGKFMILERFLHQINTETNDKIVLISNYTQTLDLIEKMCRYKKYGVLRLD 635
Query: 546 GSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
G+M I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRLV+ DPDWNPA+D QA+
Sbjct: 636 GTMNINKRQKLVDKFNDPDGSEFIFLLSSKAGGCGINLIGANRLVLIDPDWNPASDQQAL 695
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR L
Sbjct: 696 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNLRQL 755
Query: 665 FQLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCTDDLSCWHHV 709
F +TI DTHD C RC G +KPP + D + W+H+
Sbjct: 756 FLYAPDTICDTHDTFHCKRCSLEKGQFLKPPAM---LYGDATTWNHL 799
>gi|254570653|ref|XP_002492436.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238032234|emb|CAY70235.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328353550|emb|CCA39948.1| DNA repair and recombination protein RAD54 and RAD54-like protein
[Komagataella pastoris CBS 7435]
Length = 838
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 333/720 (46%), Positives = 432/720 (60%), Gaps = 78/720 (10%)
Query: 55 MTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTK------ALGVRREGA--RKALHDP 106
+T M + E IL K F VPI + + LG +R+ + LHDP
Sbjct: 101 LTSRRMLDSEGRSSPILNKKFTVPIKIDKENAFERQNSQPPPPLGTKRKPTLPPRPLHDP 160
Query: 107 TAPNALVLYTP----------------------------------------PQLSAHDLL 126
+ A+VLY P P S ++L
Sbjct: 161 MSEYAIVLYDPTVDIIPEIKEEDDRLRKEQEELEMERKKAEQITNKNKRIKPGKSLAEIL 220
Query: 127 KIDKDKI------QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
I KD V VV+DP L+ ILRPHQ GVKF++ C +G+ A GCIMADEMG
Sbjct: 221 GIAKDGSSLKKYPNVPVVIDPKLAKILRPHQISGVKFLFRCTSGLVDASAKGCIMADEMG 280
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG 239
LGKTLQCI L+WTLLRQ P I+KAI+V PSSLVKNW NE KWLG G + L IDG
Sbjct: 281 LGKTLQCIALLWTLLRQSPRGTKTIEKAIVVCPSSLVKNWANEFDKWLGKGTLTPLAIDG 340
Query: 240 GSK--AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
S + I ++L+ + GR V P+L++SYET R + L +VGL+L DEGHRLKN
Sbjct: 341 KSAKGSTISSQLSQWAMATGRNIVRPVLIVSYETLRRNVESLKGTKVGLMLADEGHRLKN 400
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+S T+ AL L +RRV+LSGTPIQNDL EYFSL+ F N G+LGT EFRK YE PILR
Sbjct: 401 GDSLTFTALNSLDCERRVILSGTPIQNDLSEYFSLLTFANPGLLGTRNEFRKNYENPILR 460
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G+DS A D ER K +++L++L IV R +IRRT+ +LSKYLPVK E V+ +++ QK L
Sbjct: 461 GRDSLADDKEREKGDQKLKELTEIVARFIIRRTNDILSKYLPVKYEYVIFCNLSETQKSL 520
Query: 418 YTNLIKSDAVRRTMK--GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAM 475
Y S ++ + +K GG G +L SI LKKLC HP+L+ + E
Sbjct: 521 YQRFTASKSISKLVKEVGG-----GAQSLQSIGLLKKLCTHPNLL-----NLPEDIEGCE 570
Query: 476 NILPTGYAASY---KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
N+LP Y + ++ ++ + S+K ++L L I T+DKIV++SNYTQTLDL E+
Sbjct: 571 NLLPDDYDYGHGNRRNREVQVWHSSKFLILQRFLYKINKETNDKIVIISNYTQTLDLIEK 630
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L Y +RLDG+M I KR K+V+ FN EF+F+LSSKAGGCG+NLIGANRL++
Sbjct: 631 LCISSRYGSLRLDGTMNINKRQKLVDKFNNPEGKEFVFLLSSKAGGCGINLIGANRLILV 690
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNPA+D QA+ARVWRDGQ K CF+YRF++TGSIEEK+ QRQ+ K LSSCVVD +D
Sbjct: 691 DPDWNPASDQQALARVWRDGQTKNCFIYRFIATGSIEEKIFQRQSAKLQLSSCVVDSNDD 750
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHV 709
V R FS L+ LFQ +ENT S+TH C RC +G Q +K + D + W+H+
Sbjct: 751 VERLFSADNLKQLFQFKENTFSETHSTYNCKRCHPDGKQFIKSSAM---LYGDPTTWNHI 807
>gi|260943410|ref|XP_002616003.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
gi|238849652|gb|EEQ39116.1| hypothetical protein CLUG_03244 [Clavispora lusitaniae ATCC 42720]
Length = 879
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 306/586 (52%), Positives = 394/586 (67%), Gaps = 27/586 (4%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
+V VV+DP L+ +LRPHQ GV+F+Y C +G+ A GCIMADEMGLGKTLQC+ LMWT
Sbjct: 280 RVPVVIDPKLARVLRPHQVAGVRFLYRCTSGLVDARAKGCIMADEMGLGKTLQCLALMWT 339
Query: 194 LLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLN 250
LLRQGP + IDK IIV PSSLV+NW NE+ KWLG G + L +DG S A++ L
Sbjct: 340 LLRQGPSGRRTIDKCIIVCPSSLVRNWANEMDKWLGPGALTPLAVDGKSTKSADLGQALQ 399
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ GR V P+L+ISYET R +A L EVGL+L DEGHRLKN +S T+ AL L+
Sbjct: 400 QWCTASGRNIVRPVLIISYETLRRNADKLAGTEVGLMLADEGHRLKNGDSLTFTALNSLR 459
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
+RRV+LSGTPIQNDL EYFSL+ F N G LGT EFR+ YE ILRG+D+ A+D E K
Sbjct: 460 CERRVILSGTPIQNDLSEYFSLLTFANPGYLGTRNEFRRNYENTILRGRDADATDDEVKK 519
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
++L +L V++ +IRRT+ +LSKYLPVK E VV + ++ Q+ LY + I SD
Sbjct: 520 GEQKLAELSQAVSKFIIRRTNDILSKYLPVKYEYVVFVGLSPFQRALYEHFISSD----- 574
Query: 431 MKGGENTKL-GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+++KL L +I LKKLC HPDL+ + D + + ++P Y +S G
Sbjct: 575 ----DSSKLIASQPLKAIDMLKKLCTHPDLL-----SLPDDIQGSRKLIPDDYQSSEAGG 625
Query: 490 K---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
+ + SAK +L+ L I+ T+DKIV++SNYT+TLDL E++ + + Y +RLDG
Sbjct: 626 RGREIQTWFSAKFSILERFLHQIRTQTNDKIVVISNYTRTLDLIEKMCRYKRYGSLRLDG 685
Query: 547 SMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+MTI KR K+V+ FN NEFIF+LSSKAGGCG+NLIGANRLV+ DPDWNPA D QA+A
Sbjct: 686 TMTINKRQKIVDRFNDPEGNEFIFLLSSKAGGCGINLIGANRLVLMDPDWNPAADQQALA 745
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK CF+YRF+ TG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR LF
Sbjct: 746 RVWRDGQKKDCFIYRFMCTGTIEEKIFQRQSMKLSLSSCVVDAKEDVERIFSGDALRLLF 805
Query: 666 QLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCTDDLSCWHHV 709
Q +T DTHD C RC G VK P + D + W+H+
Sbjct: 806 QYRPDTTCDTHDTYNCKRCSKEKGQIVKSPAM---LYGDATTWNHL 848
>gi|367011473|ref|XP_003680237.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
gi|359747896|emb|CCE91026.1| hypothetical protein TDEL_0C01370 [Torulaspora delbrueckii]
Length = 869
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/705 (45%), Positives = 418/705 (59%), Gaps = 94/705 (13%)
Query: 67 IRQILAKPFKVPILNYTGGGYSTKALGVRREGAR--KALHDPTAPNALVLYTP------- 117
I +L + F VPI Y LG +++ A + LHDPT A+VLY P
Sbjct: 116 IETVLRRSFTVPIKGYVQRHSLPLTLGTKKKIALEPRPLHDPTDEFAIVLYDPTIDGSMI 175
Query: 118 ------------------------------PQLSAHDL--------------LKIDKDKI 133
P+ ++ L ++ K
Sbjct: 176 IQDTTDVPVDTRSQSVGPEEKDNKEIPRKQPKYLSNGLKNKTLKELLGEDEDTQVKKKYA 235
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------ 169
+ VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 236 NIPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDQETVKNGSAEVGTEVGKEVVI 295
Query: 170 ---AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
AYGCIMAD MGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW NE+ K
Sbjct: 296 NRGAYGCIMADAMGLGKTLQCIALMWTLLRQGPQGKKLIDKCIIVCPSSLVNNWANELVK 355
Query: 227 WLGGRV-AALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
WLG V L IDG + + + Q GR V P+L+ISYET R + L VG
Sbjct: 356 WLGPNVLTPLAIDGKKTTSVSESIRVWAQAQGRNIVKPVLIISYETLRRNVEQLKNTRVG 415
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L+L DEGHRLKN +S T+ +L + RRV+LSGTPIQNDL EYF+L++F N G+LGT
Sbjct: 416 LMLADEGHRLKNADSLTFTSLDSIDCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTRS 475
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
+FRK +E PIL +D+ A+D + K E+L++L +V++ +IRR + +L+KYLP K E V
Sbjct: 476 DFRKNFENPILLSRDADATDDQIKKGQEQLQKLSYVVSKFIIRRANDILAKYLPCKYEHV 535
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
+ + + QK+LY +KS + + +KG E G L +I LKKLCNHPDL+ +
Sbjct: 536 IFVNLRPFQKDLYERSVKSREITKMVKGNE---AGSQPLKAIGQLKKLCNHPDLL--NFE 590
Query: 466 TGADGFENAMNI-----LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
D + +NI +P+ +++ + E S K +L+ L I+ +DDKIVL+
Sbjct: 591 EDLDNLD-GLNIPDDYEIPSSSNTNFRRN-VQTEFSGKFAILERFLKTIRSQSDDKIVLI 648
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCG 579
SNYTQTLDL ERL + + Y +RLDG+M I KR K+V+ FN EFIF+LSSKAGGCG
Sbjct: 649 SNYTQTLDLIERLCRHKHYASLRLDGTMNINKRQKLVDRFNDPEGQEFIFLLSSKAGGCG 708
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K
Sbjct: 709 INLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQRQSMKM 768
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
+LSSCVVD +EDV R F+ LR LF+ NTI DTH+ C RC
Sbjct: 769 SLSSCVVDAQEDVERLFTTDNLRMLFKYNGNTICDTHETYHCKRC 813
>gi|165971312|gb|AAI58841.1| Rad54l protein [Rattus norvegicus]
Length = 470
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 296/473 (62%), Positives = 360/473 (76%), Gaps = 11/473 (2%)
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R H VL K VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSL
Sbjct: 1 RLHVEVLKKGNVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSL 60
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
VHFVN GILGTA EF+K +E PIL+ +D+ AS+A+R ERL +LI IVNRCLIRRTS
Sbjct: 61 VHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQLGEERLRELISIVNRCLIRRTSD 120
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+LSKYLPVK EQVVC ++T LQ ELY ++ + G K+ +++LSSITSLKK
Sbjct: 121 ILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELHEG---KMSVSSLSSITSLKK 177
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
LCNHP L+ DK DGFE + I P GY S + +LS K++VLD +LA+ +
Sbjct: 178 LCNHPALIYDKCVAEEDGFEGTLGIFPPGY----NSKAVEPQLSGKMLVLDYILAMTRSR 233
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFML 571
+ DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FML
Sbjct: 234 SSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFML 293
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+
Sbjct: 294 SSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKI 353
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVK 691
QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV
Sbjct: 354 FQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVW 413
Query: 692 PPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
PPP SDCT DL+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 414 PPPDGSDCTSDLAQWNHNTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 466
>gi|401841469|gb|EJT43853.1| RAD54-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 898
Score = 591 bits (1524), Expect = e-166, Method: Compositional matrix adjust.
Identities = 320/647 (49%), Positives = 415/647 (64%), Gaps = 61/647 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPRLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNSSNEEPLKSDEKALSQS 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEGDNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELVKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAVHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L ++GL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKTCDIGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LGT +FRK +E PILRG+D+ A+D E +K+ E+L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGTRAQFRKNFEKPILRGRDADATDKEISKSEEQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LSKYLP K E V+ + + LQ +LY LIKS R +K G L +I LKKL
Sbjct: 559 LSKYLPCKYEHVIFVNLKPLQNDLYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI-LPTGYA-ASYKSGKLLIELSAKLMVLDTMLAVIKM 511
C HP+L+ D F++ ++ LP Y+ + KS + + SAK +L+ L I+
Sbjct: 615 CTHPNLL-----NFEDEFDDENDLDLPDDYSMPASKSRDVQTKYSAKFSILERFLHKIRT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y RLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAARLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ E+TI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNEDTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVTEKRW--LVDPILK--HCWGAGVSFVF 732
+K P + D + W+H+ D +LK H +G +SF F
Sbjct: 850 LKRAP--AMLYGDATTWNHLNHDALEKTNDHLLKNEHNYG-DISFAF 893
>gi|443926309|gb|ELU45006.1| DNA repair and recombination protein RAD54 [Rhizoctonia solani AG-1
IA]
Length = 834
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 321/633 (50%), Positives = 415/633 (65%), Gaps = 44/633 (6%)
Query: 96 REGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDK-----IQVHVVVDPVLSNILRPH 150
RE KA D A N LY P + S +LL K+ +V VV+DP L ILRPH
Sbjct: 198 REEKEKAAMDAGAAN---LYNPHK-SLKELLGGGKEAQATVAPKVPVVIDPKLGKILRPH 253
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP--LAKPLIDKA 208
Q EGVKF+Y C TG+ +++ YGCIMADEMGLGKTLQCITLMWTLL+Q P K I+K
Sbjct: 254 QIEGVKFLYRCTTGMTVDNQYGCIMADEMGLGKTLQCITLMWTLLKQSPRGAGKGTIEKC 313
Query: 209 IIVAPSSLVKNWCNEITKWLGGRVA-ALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILV 266
II P+SLVKNW NE+ KWLG IDG G+KA++ + ++Q GR P+++
Sbjct: 314 IIACPASLVKNWANELVKWLGDSAPKTFAIDGTGTKADLIANVRRWVQAKGRHVTLPVMI 373
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+SYET R+ L E+GL+LCDEGHRLKN E+ T++ L L KRRV+LSGTPIQNDL
Sbjct: 374 VSYETLRTLCEELAGCEIGLMLCDEGHRLKNSENLTFKTLNELNCKRRVILSGTPIQNDL 433
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
EYFSL++F N+ LGT EFRK +E I+RG+D+ A+D E+ + +L +L G V +
Sbjct: 434 SEYFSLLNFANKDYLGTKNEFRKNFENAIIRGRDADATDKEKEASIAKLRELSGRVQPFI 493
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
I LPVK EQVV ++ LQ LY + I S V++ ++G +G L +
Sbjct: 494 I----------LPVKYEQVVFCALSPLQLALYRHFITSPEVKKLLRG-----VGSQPLKA 538
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS------GKLLIE--LSAK 498
I LKKLCNHP L+ + G E+ ILP GY A S G + + L K
Sbjct: 539 IGQLKKLCNHPALL--DLPNDIAGSED---ILPPGYNAGMLSAGGRGGGNMTPDCSLGGK 593
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
+VL+ L I+ T+DKIVL+SNYTQT+DLFE+L + + Y +RLDG++++ KR K+V+
Sbjct: 594 FVVLERFLDRIRRETNDKIVLISNYTQTMDLFEKLCRSKSYGCIRLDGTLSVAKRQKLVD 653
Query: 559 TFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA+D QA+ARVWRDGQKK CF
Sbjct: 654 RFNDPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKECF 713
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHD 677
VYRF+STG+IEEK+ QRQA K+ALSSCVVD +ED RHFS ELR LF+L E+T+ +TH+
Sbjct: 714 VYRFVSTGTIEEKIFQRQASKQALSSCVVDEKEDTERHFSGDELRKLFELRESTLCETHE 773
Query: 678 KIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
KC RC NG Q P + D + W+H T
Sbjct: 774 TYKCKRCKNGKQFMKAP--AMLYGDGNTWNHYT 804
>gi|448525548|ref|XP_003869143.1| Rad54 protein [Candida orthopsilosis Co 90-125]
gi|380353496|emb|CCG23006.1| Rad54 protein [Candida orthopsilosis]
Length = 836
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 310/591 (52%), Positives = 398/591 (67%), Gaps = 27/591 (4%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQC+TLMWTL
Sbjct: 233 VPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKAKGCIMADEMGLGKTLQCLTLMWTL 292
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
LRQ P K I+K IIV PSSLV+NW NEI KWLG G + L IDG K+ N L + +
Sbjct: 293 LRQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDG--KSTKSNDLGAAL 350
Query: 254 QTY----GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
Q + GR V P+L+ISYET R + L EVGL+L DEGHRLKN ES T+ AL L
Sbjct: 351 QQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGESLTFTALNSL 410
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ RRV+LSGTPIQNDL EYFSL++F N G LGT +FRK +E ILRG+D+ A+D ER
Sbjct: 411 RCDRRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRDADATDKERE 470
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K + +L +L +V++ +IRRT+ +LSKYLPVK E V+ ++ +QK LY + I S +++
Sbjct: 471 KGDAKLLELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKSLYNHFITSPEIKK 530
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY--- 486
+KG +G L +I LKKLCNHPDL+ E N++P Y +S
Sbjct: 531 LLKG-----IGSQPLKAIGMLKKLCNHPDLLDLPDDL-----EGCENLIPEDYESSITAT 580
Query: 487 -KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
+ ++ S K ++L+ L I TDDKIVL+SNYTQTLDL E++ + + Y +RLD
Sbjct: 581 GRKREVQTWFSGKFLILERFLHKIHRETDDKIVLISNYTQTLDLIEKMCRNKKYGSLRLD 640
Query: 546 GSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
G+M I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA+D QA+
Sbjct: 641 GTMNINKRQKLVDRFNDPNGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQQAL 700
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS L+ L
Sbjct: 701 ARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSADNLKQL 760
Query: 665 FQLEENTISDTHDKIKCSRC--VNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
F + NT DTHD C RC G +K P + D + W+H+ ++
Sbjct: 761 FMYQPNTECDTHDTYNCKRCNKEKGQFIKAPAM---LYGDATTWNHLNHRK 808
>gi|302504353|ref|XP_003014135.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371]
gi|291177703|gb|EFE33495.1| hypothetical protein ARB_07440 [Arthroderma benhamiae CBS 112371]
Length = 790
Score = 589 bits (1518), Expect = e-165, Method: Compositional matrix adjust.
Identities = 331/707 (46%), Positives = 431/707 (60%), Gaps = 94/707 (13%)
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYST----KALGVRREGAR---KAL 103
++ P+ K + + E RQ F VP+++ + G YS+ LG+R GA K L
Sbjct: 93 NRFPVFK--VKDKETTFRQ----RFHVPLIDKSSGNYSSGRAAPTLGMRC-GATFVVKPL 145
Query: 104 HDPTAPNALVLYTPP---------------------------------QLSAHDLLKIDK 130
HDP+ A+VLY P S ++L I K
Sbjct: 146 HDPSGEFAIVLYDPTIDDKPDDKDESKDTAGNKEGEEVEQKKLNQPLVHKSLAEILGIKK 205
Query: 131 D---KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
+ + +V VV+DP L+ ILRPHQ EGVK LQC
Sbjct: 206 NVDERPKVPVVIDPRLAKILRPHQIEGVK----------------------------LQC 237
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAE 244
ITLMWTLL+Q P A KP + KA+I P++LV NW NE+ KWLG + IDG SK E
Sbjct: 238 ITLMWTLLKQSPEAGKPTVQKAVIACPATLVGNWANELVKWLGKDAINPFVIDGKASKTE 297
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+ ++L + GR V P+L++SYET R ++ L ++GL+LCDEGHRLKN +SQTY
Sbjct: 298 LTSQLRQWAIASGRSVVRPVLIVSYETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYV 357
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL L ++RV+LSGTPIQNDL EYFSL+ F N GILG+ EF K YE PILRG+D+ +
Sbjct: 358 ALNKLNVQKRVILSGTPIQNDLSEYFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGT 417
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
D ++ K NERL +L+ +VN+ +IRR++ LLSKYLPVK E VV + Q +LY + I+S
Sbjct: 418 DEQQKKGNERLAELLNLVNKFIIRRSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQS 477
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
++ ++G G L +I LKKLCNHPDL+ K+ G E T
Sbjct: 478 PEIKSLLRGK-----GSQPLKAIGILKKLCNHPDLL--KLSEDLPGCEQYFPEDMTVSNG 530
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
++ S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RL
Sbjct: 531 RRGDREVKTWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRL 590
Query: 545 DGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DG+M +KKR+K+V+ FN EF+F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA
Sbjct: 591 DGTMGVKKRSKLVDKFNDPNGEEFVFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQA 650
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
+ARVWRDGQ K CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR
Sbjct: 651 LARVWRDGQSKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRE 710
Query: 664 LFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHH 708
LFQ + T SDTHD KC RC +G Q +K P + D S W+H
Sbjct: 711 LFQFKPGTTSDTHDTFKCKRCRPDGTQHIKAPAM---LYGDTSSWNH 754
>gi|334321546|ref|XP_003340126.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Monodelphis domestica]
Length = 966
Score = 588 bits (1515), Expect = e-165, Method: Compositional matrix adjust.
Identities = 293/453 (64%), Positives = 352/453 (77%), Gaps = 10/453 (2%)
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN E+QTYQAL GL RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+K +
Sbjct: 520 GHRLKNSENQTYQALNGLHTSRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKHF 579
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+G+D+ AS+A R K ERL++L+ +VNRCLIRRTS +LSKYLPVK EQVVC ++T
Sbjct: 580 ELPILKGRDADASEAARQKGEERLQELVNVVNRCLIRRTSDILSKYLPVKIEQVVCCRLT 639
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK +GF
Sbjct: 640 PLQTELYRRFLRQAKPAEELREG---KMSVSSLSSITSLKKLCNHPGLIYDKCVEEEEGF 696
Query: 472 ENAMNILPTGYAASYKSGKLL-IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
A+ + P GY SGK + +LS K++VLD +LAV + T+ DK+VLVSNYTQTLDLF
Sbjct: 697 AGALALFPPGY-----SGKSVEPQLSGKMLVLDYILAVTRQTSSDKVVLVSNYTQTLDLF 751
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLV 589
E+L +LR Y YVRLDG+M+IKKRAKVVE FN S+ +FIFMLSSKAGGCGLNLIGANRLV
Sbjct: 752 EKLCRLRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFIFMLSSKAGGCGLNLIGANRLV 811
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ HKKALSSCVVD E
Sbjct: 812 MFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQTHKKALSSCVVDEE 871
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
+DVARHFS+ ELR LF L E T SDTHDK+ C RCVNG QV+PP SDCT DL+ WHH
Sbjct: 872 QDVARHFSLGELRELFTLNEATASDTHDKLHCRRCVNGHQVRPPAEGSDCTSDLAQWHHS 931
Query: 710 TEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKS 742
+KR + D +L W A V+F F+Q S + ++
Sbjct: 932 ADKRGIPDAVLLAAWDAAVTFAFHQRSHEEQRG 964
Score = 172 bits (436), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 123/189 (65%), Gaps = 17/189 (8%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKT-FPPPVKKEKRSCTSRKPLGSVDNED---EPNSKLPMT 56
RRSLAPSQL+KR E S + + P KR RKP G + + P K P+T
Sbjct: 118 RRSLAPSQLAKRKSEGSGSDEEDWHPETVTPKR----RKPSGEAGSPECFWSPFRK-PLT 172
Query: 57 KE-------EMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAP 109
+ + S+HE IR IL+KPFKVPI NY G +ALG++R G R+ALHDP
Sbjct: 173 QLTNRPHCLDSSQHEAFIRSILSKPFKVPIPNYQGP-LGLRALGIKRAGLRQALHDPLEE 231
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
ALVLY PP LSAHD LK+D++K+ VHVVVDP+L +LRPHQREGV+F++ECVT I
Sbjct: 232 GALVLYEPPPLSAHDQLKLDREKLPVHVVVDPILGKVLRPHQREGVRFLWECVTSRNIPG 291
Query: 170 AYGCIMADE 178
++GCIMADE
Sbjct: 292 SHGCIMADE 300
>gi|354545782|emb|CCE42510.1| hypothetical protein CPAR2_201530 [Candida parapsilosis]
Length = 836
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 309/592 (52%), Positives = 399/592 (67%), Gaps = 27/592 (4%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
V VV+DP L+ ILRPHQ GVKF+Y C G+ A GCIMADEMGLGKTLQC+TLMWT
Sbjct: 232 NVPVVIDPKLAKILRPHQIAGVKFLYRCTAGLMDPKAKGCIMADEMGLGKTLQCLTLMWT 291
Query: 194 LLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSF 252
LL+Q P K I+K IIV PSSLV+NW NEI KWLG G + L +DG K+ N+L +
Sbjct: 292 LLKQSPRGKRTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAVDG--KSTKSNELGAA 349
Query: 253 MQTY----GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
+Q + GR V P+L+ISYET R + L EVGL+L DEGHRLKN ES T+ AL
Sbjct: 350 LQQWSTAQGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGESLTFTALNS 409
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L+ +RRV+LSGTPIQNDL EYFSL++F N G LGT +FRK +E ILRG+D+ A+D ER
Sbjct: 410 LRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFENAILRGRDADATDKER 469
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
K + +L +L +V++ +IRRT+ +LSKYLPVK E V+ ++ +QK+LY + I S ++
Sbjct: 470 EKGDAKLIELSQLVSKFIIRRTNDILSKYLPVKYEYVLFTGLSPMQKDLYNHFITSPEIK 529
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY-- 486
+ +KG +G L +I LKKLCNHPDL+ E ++ P Y +S
Sbjct: 530 KLIKG-----IGSQPLKAIGMLKKLCNHPDLLDLPDDL-----EGCESLKPEDYESSITA 579
Query: 487 --KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
+ + S K M+L+ L I TDDKIVL+SNYTQTLDL E++ + + Y +RL
Sbjct: 580 TGRRRDVQTWFSGKFMILERFLHKIHRETDDKIVLISNYTQTLDLIEKMCRNKKYGALRL 639
Query: 545 DGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DG+M I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA+D QA
Sbjct: 640 DGTMNINKRQKLVDKFNDPNGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQQA 699
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS LR
Sbjct: 700 LARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSADNLRQ 759
Query: 664 LFQLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCTDDLSCWHHVTEKR 713
LF + +T DTHD C RC G +K P + D + W+H+ K+
Sbjct: 760 LFMYQPDTECDTHDTYNCKRCKKDTGQFIKAPAM---LYGDATTWNHLNHKK 808
>gi|294656433|ref|XP_002770263.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
gi|199431470|emb|CAR65619.1| DEHA2D05456p [Debaryomyces hansenii CBS767]
Length = 838
Score = 586 bits (1511), Expect = e-164, Method: Compositional matrix adjust.
Identities = 328/711 (46%), Positives = 437/711 (61%), Gaps = 76/711 (10%)
Query: 60 MSEHENLIRQILAKPFKVPILNYTGGGYSTKA----LGVRREG--ARKALHDPTAPNALV 113
++ +EN R+ PF N + K LG RR+ +ALHDPT+ A+V
Sbjct: 114 LNSNENKFRKSFTIPFSKN--NEKMAQFDNKGPPPPLGTRRKTILPPRALHDPTSEFAIV 171
Query: 114 LYTPP------------------------------------QLSAHDLLKIDKDK----- 132
LY P S ++L I K+
Sbjct: 172 LYDPTVDIIPIIEETKENDKEKELEENKENIEERPAKRQRTHKSLAEILGICKNPEDSLA 231
Query: 133 --IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
V VV+DP L+ ILRPHQ GVKF+Y C +G+ A GCIMADEMGLGKTLQC+ L
Sbjct: 232 KYPDVPVVIDPRLAKILRPHQIAGVKFLYRCTSGLIDPRAKGCIMADEMGLGKTLQCLAL 291
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDN 247
MWTLL+Q P K I+K IIV PSSLV+NW NEI KWLG G + L +DG S +++
Sbjct: 292 MWTLLKQSPRGKRTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAVDGKSTKSSDLGQ 351
Query: 248 KLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
L + GR V P+L+ISYET R + L EVGL+L DEGHRLKN +S T+ AL
Sbjct: 352 ALQQWSVATGRNIVRPVLIISYETLRRNVDKLAGTEVGLMLADEGHRLKNGDSLTFTALN 411
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
L+ +RRV+LSGTPIQNDL EYFSL++F N G LGT +FRK +E+ ILRG+D+ A+D E
Sbjct: 412 SLRCERRVILSGTPIQNDLSEYFSLLNFANPGYLGTRNDFRKNFESAILRGRDADATDKE 471
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
+ ++++L +L +V++ +IRRT+ +LSKYLPVK E VV + ++ +QK+LY + S +
Sbjct: 472 KEVSDKKLTELSQMVSKFIIRRTNDILSKYLPVKYEYVVFVGLSPMQKKLYEYFVTSPEI 531
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNH-PDLVMDKIQTGADGFENAMNILPTGYAASY 486
++ +KG +G L +I LKKLCNH L + G D +++P Y +
Sbjct: 532 KKLLKG-----VGSQPLKAIGMLKKLCNHPDLLNLPDDLDGCD------SLIPEDYVPAI 580
Query: 487 KSGKLLIEL----SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
+G E+ S K M+L+ L I+ T+DKIVL+SNYTQTLDL E++ + + Y V
Sbjct: 581 GNGNRSREIQTWFSGKFMLLERFLHKIRTETNDKIVLISNYTQTLDLIEKMCRYKKYANV 640
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDG+M I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA+D
Sbjct: 641 RLDGTMNINKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPASDQ 700
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS L
Sbjct: 701 QALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNL 760
Query: 662 RSLFQLEENTISDTHDKIKCSRCV--NGIQVKPPPLESDCTDDLSCWHHVT 710
+ LF+ + NT DTHD C RC G +K P + D + W+H+
Sbjct: 761 KQLFEFQPNTPCDTHDTYSCKRCRPDTGQFIKSPAM---LYGDSTTWNHLN 808
>gi|365765783|gb|EHN07289.1| Rad54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 898
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTAQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E TK +L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
+K P + D + W+H+
Sbjct: 850 LKRAP--AMLYGDATTWNHLN 868
>gi|409045739|gb|EKM55219.1| hypothetical protein PHACADRAFT_173301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 799
Score = 585 bits (1508), Expect = e-164, Method: Compositional matrix adjust.
Identities = 330/721 (45%), Positives = 440/721 (61%), Gaps = 77/721 (10%)
Query: 71 LAKPFKVPILNYTGGGYSTK-----ALGVRREG--ARKALHDPTAPNALVLYTP------ 117
+++ F +P + G Y K ALG+R + LHDP +A+VLY P
Sbjct: 92 VSRRFSIPSMKNAAGEYVQKPMSNVALGIRPVANIIPRPLHDPMEDHAIVLYDPTVDDRE 151
Query: 118 ------------------------------PQLSAHDLL------KIDKDKIQVHVVVDP 141
P S ++L K++K +V VV+DP
Sbjct: 152 TDEERKERELEEEKERAAKEAREKIAGLYNPHKSLREILGGGTKKKLNK---KVPVVIDP 208
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
L +LRPHQ EGV+FM++ TG+ +E YGCIMADEMGLGKTLQC+TLMWTLL+Q P A
Sbjct: 209 RLGKVLRPHQIEGVQFMFKATTGMIVEHQYGCIMADEMGLGKTLQCLTLMWTLLKQSPHA 268
Query: 202 -KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ ++ II P+SLVKNW NEI KWLG G V + +DG + Q GR
Sbjct: 269 GRSTAERVIIACPASLVKNWGNEIVKWLGPGVVGTVLLDGTD--NLGKARRWIEQPRGRN 326
Query: 260 PVNPILVISYETFR----SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
NP+L+ SYE R S+ S+ E+GL+LCDEGHRLKN ES+T+Q L LKAKRRV
Sbjct: 327 CTNPVLITSYEYLRTLGESYPSICEM-EIGLLLCDEGHRLKNTESKTWQVLSTLKAKRRV 385
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+L+GTPIQNDL EYFSL+ F LGT EFRK +E I+RG+D+ ASDA R K+ ++L
Sbjct: 386 ILTGTPIQNDLTEYFSLLSFALPTYLGTRNEFRKNFENAIIRGRDADASDAVREKSEQKL 445
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
+ L +V++ +IRRT+ LLSKYLPVK E VV M+D+Q+++Y + + + ++G E
Sbjct: 446 KDLAALVSKFIIRRTNDLLSKYLPVKYEHVVFCHMSDIQRDMYCHFVDHPQTKTELRGKE 505
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
L +I LKKL NHP+L+ +T ++N + + + E
Sbjct: 506 -----AKPLVAINILKKLVNHPELLPIGKETKHAEWDNKKDA-----EKEMEMRDVHTEW 555
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S K +VL+ L ++ T+DKIVL+SNYT TLD+FE+L + + Y Y RLDG M +KKR +
Sbjct: 556 SGKFLVLERFLDKMRQETNDKIVLISNYTSTLDVFEKLLRAKRYGYFRLDGKMNVKKRQE 615
Query: 556 VVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
VV+ FN EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA+D QA+ARVWRDGQKK
Sbjct: 616 VVDKFNNPEVPEFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKK 675
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
CFVYRF+ TG+IEEK+ QRQA K++LSS VVD +EDV R FS LR LF+ + T+ +
Sbjct: 676 ECFVYRFICTGTIEEKVFQRQAQKQSLSSAVVDEKEDVERFFSRDNLRQLFKYNDKTLCE 735
Query: 675 THDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT--EKRWLVDPILKHCWG-AGVSFV 731
TH+ KC RC NG Q ++ D S W+H T E R D +L+ G +SFV
Sbjct: 736 THETFKCKRCKNGKQFMKS--QALLYGDASTWNHYTNEELRNNHDDLLRAETGLPEISFV 793
Query: 732 F 732
F
Sbjct: 794 F 794
>gi|151943650|gb|EDN61960.1| radiation sensitive protein [Saccharomyces cerevisiae YJM789]
Length = 898
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 311/621 (50%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E TK +L++L +V++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTVVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
+K P + D + W+H+
Sbjct: 850 LKRAP--AMLYGDATTWNHLN 868
>gi|256272233|gb|EEU07224.1| Rad54p [Saccharomyces cerevisiae JAY291]
gi|259146347|emb|CAY79604.1| Rad54p [Saccharomyces cerevisiae EC1118]
Length = 898
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E TK +L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
+K P + D + W+H+
Sbjct: 850 LKRAP--AMLYGDATTWNHLN 868
>gi|6321275|ref|NP_011352.1| DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288c]
gi|417577|sp|P32863.1|RAD54_YEAST RecName: Full=DNA repair and recombination protein RAD54
gi|172343|gb|AAA34949.1| recombination and repair protein [Saccharomyces cerevisiae]
gi|728692|emb|CAA88534.1| RAD54 [Saccharomyces cerevisiae]
gi|1322760|emb|CAA96875.1| RAD54 [Saccharomyces cerevisiae]
gi|285812049|tpg|DAA07949.1| TPA: DNA-dependent ATPase RAD54 [Saccharomyces cerevisiae S288c]
gi|392299585|gb|EIW10679.1| Rad54p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 898
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E TK +L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
+K P + D + W+H+
Sbjct: 850 LKRAP--AMLYGDATTWNHLN 868
>gi|190407107|gb|EDV10374.1| DNA repair and recombination protein RAD54 [Saccharomyces
cerevisiae RM11-1a]
Length = 898
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E TK +L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
+K P + D + W+H+
Sbjct: 850 LKRAP--AMLYGDATTWNHLN 868
>gi|328863054|gb|EGG12154.1| hypothetical protein MELLADRAFT_76598 [Melampsora larici-populina
98AG31]
Length = 823
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 331/702 (47%), Positives = 430/702 (61%), Gaps = 75/702 (10%)
Query: 66 LIRQILAKP--FKVPILNYTGGG------YSTKALGVRREG--ARKALHDPTAPNALVLY 115
++ + A+P F +P + T G S LGVR A + LHDP A A+VL+
Sbjct: 106 VVTPLTAQPKLFAIPKMVDTKTGATIEVRLSNTPLGVRPPPIFAPRPLHDPLADTAIVLW 165
Query: 116 TP---------------------------------------PQLSAHDLLKI-----DKD 131
P P S LL I K
Sbjct: 166 DPTVDDKPAPEPIKETISGTTPEEVEQELARLKFEEEQRKGPHKSLAALLGIAQKGETKP 225
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM 191
+V VV+DP L+ LRPHQ EGVKF+Y C TG+ + +GCIMADEMGLGKTLQCITL+
Sbjct: 226 IKKVPVVLDPRLTKTLRPHQVEGVKFLYRCTTGMVEKGVHGCIMADEMGLGKTLQCITLL 285
Query: 192 WTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGG-SKAEIDNK 248
WTLL+Q P+ KP I+KAI+ PSSLVKNW NE+ KWLG G + L +DG SKA++
Sbjct: 286 WTLLKQSPIPGKPAINKAIVACPSSLVKNWANELDKWLGAGALVPLAVDGKQSKADLLKS 345
Query: 249 LNSFMQTYGRRPVNPILVISYETFR-SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
+ ++ GRR P++++SYET R S L +GL+LCDEGHRLKN E+QTY AL
Sbjct: 346 VRQWVLADGRRVSQPVMIVSYETLRGSLVEELGTAPIGLLLCDEGHRLKNAENQTYAALN 405
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
+K ++RV+L+GTPIQNDL EYF+L++F N LG +FRK YE PILRG+DS +S +E
Sbjct: 406 SIKCEKRVILTGTPIQNDLSEYFALLNFANPNYLGDRAQFRKNYELPILRGRDSDSSQSE 465
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
T A +L++L V + +IRRT+ LLSKYLPVK E VV + Q++LY + I S +
Sbjct: 466 VTLAETKLKELTTKVQKFIIRRTNDLLSKYLPVKYEHVVFCAPSTFQRDLYRHFINSPDL 525
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYK 487
++ ++G +G L + L+KLCNHPDL+ + G E P GY +
Sbjct: 526 KKLLRG-----VGCQPLKMLGILRKLCNHPDLL--DLHQDIPGSEKC---FPEGYTSKDS 575
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
ELS K++VL+ I+ T DKIVL+SN+TQTLD+ E++ + R + +RLDG+
Sbjct: 576 RAPARPELSGKMVVLER----IRTQTTDKIVLISNFTQTLDVMEKMCRERRWGCLRLDGT 631
Query: 548 MTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
M I KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++FDPDWNPA+D QA+AR
Sbjct: 632 MQITKRQKLVDRFNNPEGKEFIFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALAR 691
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
VWRDGQKK CFVYRF+ TGS+EEK+ QRQ+ K LS+ VVD +ED AR FS LR LF
Sbjct: 692 VWRDGQKKECFVYRFILTGSVEEKVFQRQSQKMKLSASVVDEQEDDARMFSKDMLRELFT 751
Query: 667 LEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHH 708
L E T SDTHD KC RC +G Q P+ D S W+H
Sbjct: 752 LNEGTASDTHDVYKCKRCKDGKQFIKAPVM--LYGDQSTWNH 791
>gi|448124749|ref|XP_004205004.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358249637|emb|CCE72703.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 294/584 (50%), Positives = 396/584 (67%), Gaps = 20/584 (3%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GV+F+Y C G+ A GCIMADEMGLGKTLQC+TLMWTL
Sbjct: 235 VPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKAKGCIMADEMGLGKTLQCLTLMWTL 294
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNS 251
L+Q P K I+K IIV PSSLV+NW NEI KWLG G + L IDG S +++ L
Sbjct: 295 LKQSPRGKKTIEKCIIVCPSSLVRNWANEIVKWLGEGVLTPLAIDGKSTKSSDLSGALQQ 354
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L VGL+L DEGHRLKN +S T+ AL L+
Sbjct: 355 WAVASGRNIVRPVLIISYETLRRNVDKLAGTHVGLMLADEGHRLKNSDSLTFTALNSLRC 414
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
RRV+LSGTPIQNDL EYFSL++F N G LG+ +FRK +E ILRG+D+ A++ E+ K
Sbjct: 415 DRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFENDILRGRDADATEDEKNKG 474
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+++L +L +V++ +IRRT+ +L++YLP+K E VV + ++D+QKELY + I S +++ +
Sbjct: 475 DKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVGLSDMQKELYRHFITSPEIKKLL 534
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY----AASYK 487
+G +G L +I LKKLCNHPDL+ + E + +P Y +
Sbjct: 535 RG-----VGSQPLKAIGMLKKLCNHPDLL-----SLPGDIEGSEKYIPEDYIPVSGGHGR 584
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
+ ++ S K +L+ L +++ T+DKIVL+SNYTQTLDL E++ + + Y +RLDG+
Sbjct: 585 NKEVQTWFSGKFSILERFLYKLRVETNDKIVLISNYTQTLDLIEKMCRTKRYGSLRLDGT 644
Query: 548 MTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
M I KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+AR
Sbjct: 645 MNINKRQKLVDRFNDPEGPEFIFLLSSKAGGCGINLIGANRLILIDPDWNPAADQQALAR 704
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
VWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS L+ LF+
Sbjct: 705 VWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNLKQLFE 764
Query: 667 LEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
+ T +THD C RC Q++ P + D + W+H+T
Sbjct: 765 FQPETNCNTHDTYHCKRCSPEKQLEKSP--AMLYGDSTTWNHLT 806
>gi|448122424|ref|XP_004204446.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
gi|358349985|emb|CCE73264.1| Piso0_000294 [Millerozyma farinosa CBS 7064]
Length = 836
Score = 583 bits (1503), Expect = e-163, Method: Compositional matrix adjust.
Identities = 293/584 (50%), Positives = 395/584 (67%), Gaps = 20/584 (3%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L+ ILRPHQ GV+F+Y C G+ A GCIMADEMGLGKTLQC+TLMWTL
Sbjct: 235 VPVVIDPKLAKILRPHQVAGVRFLYRCTAGLVDPKAKGCIMADEMGLGKTLQCLTLMWTL 294
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS--KAEIDNKLNS 251
L+Q P K I+K IIV PSSLV+NW NEI KWLG G + L IDG S +++ L
Sbjct: 295 LKQSPRGKKTIEKCIIVCPSSLVRNWANEIIKWLGEGVLTPLAIDGKSTKSSDLSAALQQ 354
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ GR V P+L+ISYET R + L VGL+L DEGHRLKN +S T+ L L+
Sbjct: 355 WAVASGRNIVRPVLIISYETLRRNVDKLAGTHVGLMLADEGHRLKNSDSLTFTTLNSLRC 414
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
RRV+LSGTPIQNDL EYFSL++F N G LG+ +FRK +E ILRG+D+ A++ E+ K
Sbjct: 415 DRRVILSGTPIQNDLSEYFSLLNFANPGYLGSRNDFRKNFENDILRGRDADATEDEKNKG 474
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+++L +L +V++ +IRRT+ +L++YLP+K E VV + ++D+QKELY + I S +++ +
Sbjct: 475 DKKLTELTQLVSKFIIRRTNDILAQYLPIKYEYVVFVGLSDMQKELYRHFITSPEIKKLL 534
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY----AASYK 487
+G +G L +I LKKLCNHPDL+ + E + +P Y +
Sbjct: 535 RG-----VGSQPLKAIGILKKLCNHPDLL-----SLPGDIEGSERYIPEDYIPVSGGHGR 584
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
+ ++ S K +L+ L +++ T+DKIVL+SNYTQTLDL E++ + + Y +RLDG+
Sbjct: 585 NKEVQTWFSGKFSILERFLYKLRVETNDKIVLISNYTQTLDLIEKMCRTKRYGSLRLDGT 644
Query: 548 MTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
M I KR K+V+ FN +EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+AR
Sbjct: 645 MNINKRQKLVDRFNDPEGSEFIFLLSSKAGGCGINLIGANRLILIDPDWNPAADQQALAR 704
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
VWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS L+ LF+
Sbjct: 705 VWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKLSLSSCVVDEKEDVERLFSADNLKQLFE 764
Query: 667 LEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
+ T +THD C RC Q+ P + D + W+H+T
Sbjct: 765 FQPETNCNTHDTYHCKRCSPEKQIDKSP--AMLYGDSTTWNHLT 806
>gi|349578068|dbj|GAA23234.1| K7_Rad54p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 898
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 310/621 (49%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E K +L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEIAKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLDLPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
++ P + D + W+H+
Sbjct: 850 LRRAP--AMLYGDATTWNHLN 868
>gi|50302399|ref|XP_451134.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640265|emb|CAH02722.1| KLLA0A03069p [Kluyveromyces lactis]
Length = 895
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 314/668 (47%), Positives = 414/668 (61%), Gaps = 81/668 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYEC-------------------------------- 161
V VV+DP L+ ILRPHQ EGV+F+Y C
Sbjct: 235 NVPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDFLDAKTVLDSSSQSMEKADTQADS 294
Query: 162 -VTG---------------VRIED------AYGCIMADEMGLGKTLQCITLMWTLLRQGP 199
+TG ++I + AYGCIMADEMGLGKTLQC+ LMWT+L+QGP
Sbjct: 295 NITGSKSPVETDVSSLKDVIKINENSRNRGAYGCIMADEMGLGKTLQCLALMWTMLKQGP 354
Query: 200 LAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGG----SKAEIDNKLNSFMQ 254
+ IDK IIV PSSLV NW NEI KWLG G +++L IDG + + + ++ +
Sbjct: 355 QGRRSIDKCIIVCPSSLVNNWANEIDKWLGPGSLSSLAIDGKKSSLNNGNVADSVSHWAS 414
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
GR V P+L+ISY+T R + L EVGL+L DEGHRLKN +S T+ AL ++ RR
Sbjct: 415 AQGRNIVKPVLIISYDTLRRNVEQLKNCEVGLMLADEGHRLKNADSLTFTALDSIRCPRR 474
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
V+LSGTPIQNDL EYF+L++F N G+LG+ +FRK +E PIL+ +DS A+D E T +R
Sbjct: 475 VILSGTPIQNDLSEYFALLNFSNPGLLGSRNDFRKNFELPILQSRDSLATDEEVTLGKDR 534
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L QL IV++ +IRRT+ +L+KYLP K E V+ I +T Q+ LY + I+S AV++ +KG
Sbjct: 535 LRQLSNIVSKFIIRRTNNILAKYLPCKYEHVIFINLTPFQQSLYQHFIESRAVKKIVKGD 594
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS----GK 490
N L L LKKLCNHPDL+ ++ G E ++P Y +S S +
Sbjct: 595 SNQPLKAIGL-----LKKLCNHPDLL--ELSEDIPGSE---ELIPDDYQSSVDSRTSRNR 644
Query: 491 LLIE--LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
+I+ S+K VL L IK ++DKIVL+SNYTQTLDL E++ Y +RLDG+M
Sbjct: 645 SVIQTAFSSKFSVLARFLYKIKTESNDKIVLISNYTQTLDLIEKMCFSNHYGVLRLDGTM 704
Query: 549 TIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
I KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARV
Sbjct: 705 NINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILLDPDWNPAADQQALARV 764
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +LSSCVVD +EDV R FS L+ LF+L
Sbjct: 765 WRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDEKEDVERLFSSDNLKQLFKL 824
Query: 668 EENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV--DPILKHCWG 725
+ TI DTH+ C RC NG Q+ P+ D + W+H+ D +LK+ +
Sbjct: 825 DTKTICDTHETYNCKRCKNGKQILKAPVM--LYGDATSWNHLNHDALAKTNDHLLKNEFN 882
Query: 726 -AGVSFVF 732
+SF F
Sbjct: 883 HKDISFAF 890
>gi|444316964|ref|XP_004179139.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
gi|387512179|emb|CCH59620.1| hypothetical protein TBLA_0B08040 [Tetrapisispora blattae CBS 6284]
Length = 955
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 296/556 (53%), Positives = 377/556 (67%), Gaps = 29/556 (5%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCITLMWTLLRQGP K LIDK IIV PSSLV NW NE+ KWLG
Sbjct: 384 AYGCIMADEMGLGKTLQCITLMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLG 443
Query: 230 -GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
G ++ L IDG S + + + ++ Q GR V P+L+ISYET R + L
Sbjct: 444 PGTLSPLAIDGKKSSLMSSNSTVSEAIRAWGQAKGRNIVKPVLIISYETLRRNVDQLKNT 503
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
EVGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L++F N G+LG
Sbjct: 504 EVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 563
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
T EFRK YE PILR +D+ A+D E K ++L QL IV++ +IRRT+ +LSKYLP K
Sbjct: 564 TRLEFRKNYEIPILRSRDADATDKEIAKGTQQLTQLSNIVSKFIIRRTNDILSKYLPCKY 623
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-- 460
E V+ + + Q+ELY +KS +++ + G G L +I LKKLCNHP+L+
Sbjct: 624 EHVIFVNLKPFQRELYKRFVKSRDIKKVVNGVN----GSQPLKAIGLLKKLCNHPNLLNL 679
Query: 461 ---MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
++ + T D F+ +P + + S + E S K +L+ L IK +DDKI
Sbjct: 680 EDELNSVMT--DDFD-----IPDDFNMNGNSRTIQTEYSGKFSILERFLHQIKTKSDDKI 732
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAG 576
VL+SNYTQTLDL E++ + + Y +RLDG+M+I KR K+V+ FN EFIF+LSSKAG
Sbjct: 733 VLISNYTQTLDLIEKMCRNKHYGVLRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAG 792
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+
Sbjct: 793 GCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQS 852
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPP 694
K +LSSCVVD +EDV R FS LR LFQL ENTI DTH+ C RC NG Q +K
Sbjct: 853 MKMSLSSCVVDAKEDVERLFSADNLRQLFQLNENTICDTHETYHCKRCSANGKQKIKSKT 912
Query: 695 LESDCTDDLSCWHHVT 710
+ D + W+H+
Sbjct: 913 M---LYGDATTWNHLN 925
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 30/35 (85%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
+ VV+DP L+NILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 253 IPVVLDPKLANILRPHQVEGVRFLYRCVTGLVMKD 287
>gi|367000820|ref|XP_003685145.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
gi|357523443|emb|CCE62711.1| hypothetical protein TPHA_0D00680 [Tetrapisispora phaffii CBS 4417]
Length = 944
Score = 575 bits (1483), Expect = e-161, Method: Compositional matrix adjust.
Identities = 303/579 (52%), Positives = 392/579 (67%), Gaps = 24/579 (4%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCITLMWTLL+QGP K LIDK IIV PSSLV NW NE+ KWLG
Sbjct: 369 AYGCIMADEMGLGKTLQCITLMWTLLKQGPKGKRLIDKCIIVCPSSLVNNWANELIKWLG 428
Query: 230 -GRVAALPIDG-------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
G + L IDG G A + + + Q GR V P+L+ISYET R + L
Sbjct: 429 PGTLTPLAIDGKKSSLANGGNATVSQAVRGWAQARGRNIVKPVLIISYETLRRNVDQLQG 488
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
+VGL+L DEGHRLKN ES T+ AL + RRV+LSGTPIQNDL EYFSL++F N G+L
Sbjct: 489 CKVGLMLADEGHRLKNGESLTFTALNSIDCPRRVILSGTPIQNDLSEYFSLLNFSNPGLL 548
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
GT EFR+ +E PIL G+DS ASD + K +L++L IV++ +IRRT+ +LSKYLP K
Sbjct: 549 GTRSEFRRNFEIPILNGRDSEASDEDIKKGERQLQKLSHIVSKFIIRRTNDILSKYLPCK 608
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
E V+ + + Q+++Y ++IK+ V +K + K G L SI LKKLCNHPDL+
Sbjct: 609 YEHVIFVNLKPFQRDVYKSIIKTKEVAEAVKNSK--KGGSMMLRSIGLLKKLCNHPDLI- 665
Query: 462 DKIQTGADGFENAMNILPTGYAAS--YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
++ D ++++ ++P Y S KS + IE S K +L+ L I ++DKIVL
Sbjct: 666 -NLEEELDNLDDSL-VIPDDYNISNAAKSRDVRIEFSGKFAILERFLHKINTESNDKIVL 723
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGC 578
+SNYTQTLDL E+L + R Y +RLDG+M I KR K+V+ FN EFIF+LSSKAGGC
Sbjct: 724 ISNYTQTLDLIEKLCRRRQYGVLRLDGTMNINKRQKLVDRFNSPDEPEFIFLLSSKAGGC 783
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGANRL++ DPDWNPA+D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K
Sbjct: 784 GINLIGANRLILLDPDWNPASDQQALARVWRDGQKKDCFIYRFISTGTIEEKVFQRQSMK 843
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ-VKPPPLE 696
+LSSCVVD +EDV R FS L+ LFQL E TI DTH+ C RC ++G Q +K P +
Sbjct: 844 MSLSSCVVDEKEDVERLFSTDNLKQLFQLNEKTICDTHETYGCKRCDLSGKQRLKSPTM- 902
Query: 697 SDCTDDLSCWHHVTEKRW--LVDPILKHCWG-AGVSFVF 732
D + W+H+ + D +L++ +G VS+ F
Sbjct: 903 --LYGDATSWNHLNHQALEKTNDHLLRNEFGFDDVSYAF 939
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 100 RKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKI-----QVHVVVDPVLSNILRPHQREG 154
+K H PN + +L H+L D ++ + VV+DP+L ILRPHQ EG
Sbjct: 226 QKFSHRSVMPNGIRNKPLTELLKHNLTSTDMNESAKKFPSIPVVLDPMLVKILRPHQVEG 285
Query: 155 VKFMYECVTGVRIED 169
VKF+Y CVTG+ ++D
Sbjct: 286 VKFLYRCVTGLVMKD 300
>gi|255718981|ref|XP_002555771.1| KLTH0G17028p [Lachancea thermotolerans]
gi|238937155|emb|CAR25334.1| KLTH0G17028p [Lachancea thermotolerans CBS 6340]
Length = 1000
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 294/552 (53%), Positives = 378/552 (68%), Gaps = 25/552 (4%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI LMWTLLRQGP KP IDK IIV PSSLV NW NEI KWLG
Sbjct: 431 AYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKPTIDKCIIVCPSSLVNNWANEIVKWLG 490
Query: 230 -GRVAALPIDGG----SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
G +A+LPIDG S + + S+ GR V P+L+ISYET R + L +V
Sbjct: 491 RGTLASLPIDGKKSSLSNGTVAQAVRSWALAQGRSVVKPVLIISYETLRRNVEHLRHCDV 550
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
GL+L DEGHRLKN +SQT+ +L ++ RRV+LSGTPIQNDL EYF+L++F N G+LG+
Sbjct: 551 GLLLADEGHRLKNADSQTFTSLNSIRCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGSR 610
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
EFRK +E PILRG+D+ A D + K +ERL+ L IV++ +IRRT+ +LSKYLP K E
Sbjct: 611 LEFRKNFELPILRGRDADAMDEDVKKGDERLQALSTIVSKFIIRRTNDILSKYLPCKYEH 670
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
V+ + + Q+ LY +++KS ++ +K ++T+ L I LKKLCNHPDL+
Sbjct: 671 VIFVNLKPFQRSLYEHMLKSRDIKLLVKDAKHTQ----PLKHIGVLKKLCNHPDLLR--- 723
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIEL----SAKLMVLDTMLAVIKMTTDDKIVLV 520
D E + +++P Y +S S + EL S K +L L IK +DDKIV++
Sbjct: 724 --LPDDIEGSEDLMPEDYQSSTVSKRGRSELQTWHSGKFSILGRFLHKIKTESDDKIVII 781
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCG 579
SNYTQTLDL E++ + Y VRLDG+MTI KR K+V+ FN EFIF+LSSKAGGCG
Sbjct: 782 SNYTQTLDLIEKMCRSSTYPVVRLDGTMTINKRQKLVDRFNDPEGQEFIFLLSSKAGGCG 841
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+ TGSIEEK+ QRQ+ K
Sbjct: 842 INLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFICTGSIEEKIYQRQSMKM 901
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDC 699
+LSSCVVD +EDV R FS L+ LF+L +T DTH+ C RC NG Q+ ++S+
Sbjct: 902 SLSSCVVDEKEDVERLFSAGNLKQLFELRPDTNCDTHETYHCKRCKNGKQM----VKSNA 957
Query: 700 T--DDLSCWHHV 709
D + W+H+
Sbjct: 958 MLYGDATTWNHL 969
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 67/174 (38%), Gaps = 72/174 (41%)
Query: 67 IRQILAKPFKVPILNYTGGGYSTKALGVRRE---GARKALHDPTAPNALVLY-------- 115
IR L + F VPI Y +LG + + G R LHDPT A+VLY
Sbjct: 186 IRDQLQRSFTVPIPGYVPRHNIPLSLGTKPKIVLGPR-PLHDPTDEFAIVLYDPSVDGKT 244
Query: 116 -------------------------------------------TPPQLSAH--------- 123
TPP L H
Sbjct: 245 PELQDYQPNQSPPPSQLPPSSSKPTRPSATQTQQTGADSSQAGTPPPLRTHPKKLSNGLP 304
Query: 124 -----DLL---KIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
+LL K++K V VV+DP+L ILRPHQ EGVKF+Y CVTG+ ++D
Sbjct: 305 NKTLRELLGERKLEKQFSSVPVVIDPLLVKILRPHQVEGVKFLYRCVTGLVMKD 358
>gi|343961655|dbj|BAK62417.1| DNA repair and recombination protein RAD54-like [Pan troglodytes]
Length = 520
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 288/474 (60%), Positives = 354/474 (74%), Gaps = 11/474 (2%)
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
FR S L L GHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFS
Sbjct: 51 FRKPLSQLTNQPPCLDSSQHGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFS 110
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
LVHFVN GILGTA EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS
Sbjct: 111 LVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTS 170
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+LSKYLPVK EQVVC ++T LQ ELY ++ + G K+ +++LSSITSLK
Sbjct: 171 DILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLK 227
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
KLCNHP L+ DK DGF A+++ P GY+ S L +LS K++VLD +LAV +
Sbjct: 228 KLCNHPALIHDKCVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRS 283
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFM 570
+ DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FM
Sbjct: 284 RSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFM 343
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK
Sbjct: 344 LSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEK 403
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQV 690
+ QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q+
Sbjct: 404 IFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQI 463
Query: 691 KPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
+PPP SDCT DL+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 464 RPPPDGSDCTSDLAQWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 517
>gi|50290001|ref|XP_447432.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526742|emb|CAG60369.1| unnamed protein product [Candida glabrata]
Length = 942
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 291/557 (52%), Positives = 376/557 (67%), Gaps = 28/557 (5%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LI K IIV PSSLV NW NE+ KWLG
Sbjct: 372 AYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLISKCIIVCPSSLVNNWANELVKWLG 431
Query: 230 -GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
++ L +DG + + ++ Q GR V P+L+ISY+T R + L
Sbjct: 432 PNTLSPLAVDGKKSSLASGATSVAEAIKNWAQAQGRNIVKPVLIISYDTLRRNVKQLQNT 491
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
EVGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L++F N G+LG
Sbjct: 492 EVGLLLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLG 551
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
T EFR+ +E PILR +D+ A+D + ++L+ L IV++ +IRRT+ +LSKYLP K
Sbjct: 552 TRNEFRRNFEIPILRSRDADATDNDVKSGEQKLQLLSNIVSKFIIRRTNDILSKYLPCKY 611
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
E V+ + +T QK++Y LIKS +++ +KG G L +I LKKLCNHPDL+
Sbjct: 612 EHVIFVNLTPFQKQVYNMLIKSRDIKKVVKGDG----GSQPLKAIGVLKKLCNHPDLI-- 665
Query: 463 KIQTGADGFENAMNI-----LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
K+ D + N ++I +PTG KS + + S K +L+ L IK +DDKI
Sbjct: 666 KLDEELDNY-NDLDIPDDYSIPTG-----KSRDVQTQFSGKFAILERFLHKIKTESDDKI 719
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAG 576
VL+SNYTQTLDL ER+ + R Y VRLDG+M+I KR K+V+ FN EFIF+LSSKAG
Sbjct: 720 VLISNYTQTLDLIERMCRNRHYASVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAG 779
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+
Sbjct: 780 GCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQRQS 839
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQVKPPPL 695
K +LSSCVVD +EDV R FS+ LR LFQ + TI DTH+ +C RC +G Q+
Sbjct: 840 MKMSLSSCVVDAKEDVERLFSVDNLRQLFQFNDKTICDTHETFQCKRCNKHGQQIMRAA- 898
Query: 696 ESDCTDDLSCWHHVTEK 712
+ D + W+H+ K
Sbjct: 899 -AMLYGDATTWNHLNHK 914
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
V VV+DP L+ ILRPHQ EGVKF+Y CVTG+ ++D +A + L+C
Sbjct: 247 VPVVIDPKLAKILRPHQVEGVKFLYRCVTGLVMKDFLDQQLASQSSNINFLEC 299
>gi|302823829|ref|XP_002993563.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
gi|300138630|gb|EFJ05392.1| hypothetical protein SELMODRAFT_137237 [Selaginella moellendorffii]
Length = 852
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 331/739 (44%), Positives = 432/739 (58%), Gaps = 91/739 (12%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD-------PTAPNALVL-------- 114
++ +PFK P GG + +RR ARK P +PN L
Sbjct: 60 VIRRPFKSP----CPGGQTNSDELLRRLSARKKFVPWKRQPLLPLSPNVETLPIQEDPSE 115
Query: 115 ---YTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR----I 167
P L + D ++ +VVDP+++ LRPHQREGV+FM+ECVTG+R
Sbjct: 116 GSIELPDDFEPLVLWQPDGNEDGATIVVDPIVAKFLRPHQREGVQFMFECVTGLREFSKA 175
Query: 168 EDAY--GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
DA GCI+AD+MGLGKTLQ ITL+WTLLRQG P+ + IIV P+SLV NW +EI
Sbjct: 176 GDAAWSGCILADDMGLGKTLQSITLLWTLLRQGFQGSPIAKRIIIVTPTSLVSNWESEIK 235
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-NEV 284
KWLGGR + + I S+AE+ + SF+ R IL+ISYETFR HA K
Sbjct: 236 KWLGGRASVIAICEASRAEVLQDVASFLSP---RNAFQILIISYETFRLHAGKFQKEGAC 292
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDE HRLKN + T QAL L+ RRVLLSGTP+QNDL E++++V+F N GILG
Sbjct: 293 DLLICDEAHRLKNDHTLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGDV 352
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
FR+ Y+ PILRG++ A++ R ER +L VN+ ++RRT+ALLS +LP K +
Sbjct: 353 AAFRRYYQNPILRGREPEATEEARKLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVE 412
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
VVC K+T+LQ+ELYT+ I S VR + ++ L+SIT+LKKLC+HP L+ D +
Sbjct: 413 VVCCKLTNLQRELYTHFIHSKNVRLAL---QDKAKRARVLASITALKKLCSHPKLIYDTV 469
Query: 465 QTG---ADGFENAMNILP----TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ G A GFEN M P TG S ++LS K+ VL +L ++ T+D+I
Sbjct: 470 RAGGSEAAGFENCMQFFPKEMHTGRGTP--SDGSWVKLSGKMFVLARLLENLRKKTNDRI 527
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAG 576
VLVSNYTQTLDLF +L + R Y YVRLDGS +I KR K+V+ FN S NEF F+LSSKAG
Sbjct: 528 VLVSNYTQTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAG 587
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK ++YRFL+TG+IEEK+ QRQ
Sbjct: 588 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLATGTIEEKVYQRQI 647
Query: 637 HKKALSSCVV-DCEEDVAR---------------HFSMSELRSLFQLEENTISDTHDKIK 680
K+ L + D + +V + S +LR LF L + + SDTHD +
Sbjct: 648 SKEGLQKVISGDSKAEVRKLIKFLKRVVVLFQVNALSTEDLRDLFTLRDIS-SDTHDTLD 706
Query: 681 CSRCVNGIQVKPPPLESDCTD---------------------------DLSCWHHVTEKR 713
C RC ++ P L + D DL W H +
Sbjct: 707 CERC--DVENVPNELANQLGDIGAFAGTAGCLERQRHWEKQIGEPAEEDLIRWAHHSHPS 764
Query: 714 WLVDPILKHCWGAGVSFVF 732
+ D IL+ G VSFVF
Sbjct: 765 TVPDVILQWAAGEEVSFVF 783
>gi|302307807|ref|NP_984563.2| AEL297Wp [Ashbya gossypii ATCC 10895]
gi|299789178|gb|AAS52387.2| AEL297Wp [Ashbya gossypii ATCC 10895]
Length = 895
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/561 (51%), Positives = 374/561 (66%), Gaps = 28/561 (4%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI LMWTLLRQG +P I+K IIV PSSLV NW NEI KWLG
Sbjct: 323 AYGCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLG 382
Query: 230 -GRVAALPIDGG----SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
++ L IDG S + + + GR V P+L+ISYET R + L +V
Sbjct: 383 PDALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLRRNVENLKGCKV 442
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
GL+L DEGHRLKN +S T+ +L + RRV+LSGTPIQNDL EYF+L++F N G+LGT
Sbjct: 443 GLMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTR 502
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
+FRK +E PILRG+D+ A+D E +L +L IV++ +IRRT+ +LSKYLP K E
Sbjct: 503 AQFRKNFEIPILRGRDADATDKEIAAGEVKLHELSQIVSKFIIRRTNDILSKYLPCKYEH 562
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
++ + ++ +QK +Y + ++S V + MKG G L +I LKKLCNHPDL+
Sbjct: 563 ILFVNLSPMQKAIYEHFVRSREVAKLMKG-----TGSQPLKAIGLLKKLCNHPDLL---- 613
Query: 465 QTGADGFENAMNILPTGYAASY----KSGKLLIEL----SAKLMVLDTMLAVIKMTTDDK 516
D + N++P Y ++ + G+ +E+ S+K +L+ L IK ++DK
Sbjct: 614 -DLPDEIAGSTNLIPDDYQSAMTHNSRGGRSHVEVQTTHSSKFAILERFLFKIKHESNDK 672
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKA 575
IVL+SNYTQTLDL E++ + Y +RLDG+MTI KR K+V+ FN S E FIF+LSSKA
Sbjct: 673 IVLISNYTQTLDLIEKMCRYNHYGVLRLDGTMTINKRQKLVDKFNDPSGEEFIFLLSSKA 732
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF++TGSIEEK+ QRQ
Sbjct: 733 GGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFITTGSIEEKIYQRQ 792
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPP 694
+ K +LSSCVVD +EDV R FS LR LFQ + NTI DTH C RC +G Q +K P
Sbjct: 793 SMKMSLSSCVVDEKEDVERLFSSDNLRQLFQFDSNTICDTHATYHCKRCRDGKQMIKAPA 852
Query: 695 LESDCTDDLSCWHHVTEKRWL 715
+ D + W+H+ L
Sbjct: 853 M---LYGDATTWNHLNHDALL 870
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 221 VPVVIDPRLARILRPHQVEGVRFLYRCVTGLAMKD 255
>gi|374107777|gb|AEY96684.1| FAEL297Wp [Ashbya gossypii FDAG1]
Length = 895
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/561 (51%), Positives = 374/561 (66%), Gaps = 28/561 (4%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI LMWTLLRQG +P I+K IIV PSSLV NW NEI KWLG
Sbjct: 323 AYGCIMADEMGLGKTLQCIALMWTLLRQGSQGRPTIEKCIIVCPSSLVNNWANEIVKWLG 382
Query: 230 -GRVAALPIDGG----SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
++ L IDG S + + + GR V P+L+ISYET R + L +V
Sbjct: 383 PDALSPLAIDGRKSSLSNGSVAQSVRQWAIAQGRNVVKPVLIISYETLRRNVENLKGCKV 442
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
GL+L DEGHRLKN +S T+ +L + RRV+LSGTPIQNDL EYF+L++F N G+LGT
Sbjct: 443 GLMLADEGHRLKNGDSLTFTSLDSINCPRRVILSGTPIQNDLSEYFALLNFSNPGLLGTR 502
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
+FRK +E PILRG+D+ A+D E +L +L IV++ +IRRT+ +LSKYLP K E
Sbjct: 503 AQFRKNFEIPILRGRDADANDKEIAAGEVKLHELSQIVSKFIIRRTNDILSKYLPCKYEH 562
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
++ + ++ +QK +Y + ++S V + MKG G L +I LKKLCNHPDL+
Sbjct: 563 ILFVNLSPMQKAIYEHFVRSREVAKLMKG-----TGSQPLKAIGLLKKLCNHPDLL---- 613
Query: 465 QTGADGFENAMNILPTGYAASY----KSGKLLIEL----SAKLMVLDTMLAVIKMTTDDK 516
D + N++P Y ++ + G+ +E+ S+K +L+ L IK ++DK
Sbjct: 614 -DLPDEIAGSTNLIPDDYQSAMTHNSRGGRSHVEVQTTHSSKFAILERFLFKIKHESNDK 672
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKA 575
IVL+SNYTQTLDL E++ + Y +RLDG+MTI KR K+V+ FN S E FIF+LSSKA
Sbjct: 673 IVLISNYTQTLDLIEKMCRYNHYGVLRLDGTMTINKRQKLVDKFNDPSGEEFIFLLSSKA 732
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF++TGSIEEK+ QRQ
Sbjct: 733 GGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFITTGSIEEKIYQRQ 792
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPP 694
+ K +LSSCVVD +EDV R FS LR LFQ + NTI DTH C RC +G Q +K P
Sbjct: 793 SMKMSLSSCVVDEKEDVERLFSSDNLRQLFQFDSNTICDTHATYHCKRCRDGKQMIKAPA 852
Query: 695 LESDCTDDLSCWHHVTEKRWL 715
+ D + W+H+ L
Sbjct: 853 M---LYGDATTWNHLNHDALL 870
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 29/35 (82%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 221 VPVVIDPRLARILRPHQVEGVRFLYRCVTGLAMKD 255
>gi|410077739|ref|XP_003956451.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
gi|372463035|emb|CCF57316.1| hypothetical protein KAFR_0C03240 [Kazachstania africana CBS 2517]
Length = 913
Score = 555 bits (1431), Expect = e-155, Method: Compositional matrix adjust.
Identities = 287/550 (52%), Positives = 369/550 (67%), Gaps = 20/550 (3%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI L+WTLLRQGP K LIDK IIV PSSLV NW NE+ KWLG
Sbjct: 345 AYGCIMADEMGLGKTLQCIALLWTLLRQGPQGKGLIDKCIIVCPSSLVNNWANELVKWLG 404
Query: 230 -GRVAALPIDG-------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
G + L IDG A + + + S+ Q GR V P+L+ISYET R + L
Sbjct: 405 PGTLTPLAIDGKKSSITDAGNASVADAIRSWAQAKGRNIVKPVLIISYETLRRNVDQLKN 464
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
+ VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+ F N G+L
Sbjct: 465 SNVGLMLADEGHRLKNGDSLTFTALDSINCPRRVILSGTPIQNDLSEYFALLSFSNPGLL 524
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G+ +FR+ YE PILRG+D+ A+D E K +LE+L IV++ +IRRT+ +LSKYLP K
Sbjct: 525 GSRAQFRRNYELPILRGRDAEATDKEIKKGEGQLEKLSNIVSKFIIRRTNDILSKYLPCK 584
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
E V+ + + QK LY L+KS V++ +KG G L +I LKKLCNHP L+
Sbjct: 585 YEHVIFVNLKPFQKSLYQQLLKSRDVKKLVKGMG----GPQPLKAIGLLKKLCNHPALLD 640
Query: 462 DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
+ + + FE LP + + ++ + S K +L+ L I +DDKIVL+S
Sbjct: 641 FEKELESADFE-----LPDVFRDLHNR-EVQPQYSGKFAILERFLHKINAESDDKIVLIS 694
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGL 580
NYTQTLDL ER+ + + Y +RLDG+M+I KR +V+ FN EFIF+LSSKAGGCG+
Sbjct: 695 NYTQTLDLIERMCRRKQYGVIRLDGTMSINKRQTLVDRFNDPEGQEFIFLLSSKAGGCGI 754
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QRQ+ K +
Sbjct: 755 NLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQRQSMKMS 814
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT 700
LSSCVVD +EDV R FS LR LFQL+E+TI +TH+ C RC N + +
Sbjct: 815 LSSCVVDAKEDVERLFSSGNLRKLFQLDEDTICNTHETYHCKRC-NKHGKQAVKANAMLY 873
Query: 701 DDLSCWHHVT 710
D + W+H+
Sbjct: 874 GDTTTWNHLN 883
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 64/159 (40%), Gaps = 54/159 (33%)
Query: 65 NLIRQILAKPFKVPILNYTGGGYSTKALGVRRE--GARKALHDPTAPNALVLYTPP---- 118
N I +L + F VPI Y LG + + + LHDPT A+VLY P
Sbjct: 117 NEIEIVLKRSFTVPIKGYVQRHSLPLTLGTKTKIIPEPRPLHDPTDEFAIVLYDPSVDGD 176
Query: 119 ----------QLSAHDLLKIDKDKI----------------------------------- 133
+ +D + +K+K+
Sbjct: 177 MIIHEKGNVREQQKNDNTEENKNKVDTSKKEFAHPKILSNGVRNKTLQELLGSNESKKRE 236
Query: 134 ---QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
V VV+DP LS ILRPHQ EGVKF+Y CVTG+ ++D
Sbjct: 237 TFANVPVVIDPKLSKILRPHQVEGVKFLYRCVTGLTMKD 275
>gi|401884850|gb|EJT48988.1| DNA recombination and repair protein Rad54B [Trichosporon asahii
var. asahii CBS 2479]
Length = 794
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 320/711 (45%), Positives = 435/711 (61%), Gaps = 78/711 (10%)
Query: 70 ILAKPFKVPILNYT------GGGYSTKALGVRREG--ARKALHDPTAPNALVLYTP---- 117
+ +K F +P++ S +LG R A + LHDP A +A+VLY P
Sbjct: 109 VFSKSFAIPVMTNAKTSEKIAHPLSHASLGARPHPTLAPRPLHDPMADHAIVLYDPTIDD 168
Query: 118 ---------------------PQLSAHDLLKID----KDKIQVHVVVDPVLSNILRPHQR 152
P S +L I+ K ++V VV+DP LS +LRPHQ
Sbjct: 169 KPDPEEVAQKEEAAKKEEDRGPHKSLKAILGIEDKTKKKVVKVPVVIDPRLSKVLRPHQI 228
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIV 211
EGVK + G AD GKTLQCI L+WTLL+Q P+ K +K +I
Sbjct: 229 EGVKV------------SLGGKSAD----GKTLQCIALLWTLLKQSPVPGKGTCEKVVIA 272
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
P+SLV NW NE+ KWLG G V L +DG G KAE+ + + GR P++++SY
Sbjct: 273 CPTSLVGNWANELIKWLGPGAVNPLVVDGKGGKAELIPAVRRWAAASGRSVTLPVMIVSY 332
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
ET R+ + L +GL+L DEGHRLKN ++ T+QAL L +RRV+L+GTPIQNDL EY
Sbjct: 333 ETLRTLKTELDGCPIGLLLADEGHRLKNADTLTFQALTALNVQRRVILTGTPIQNDLSEY 392
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
F+L++F N LG+ EF+K +E ILRG+D+ A+D E+ +++ +L++L G+V+R +IRR
Sbjct: 393 FALLNFANPEYLGSRAEFKKNFELKILRGRDADATDKEKEESDAKLKELGGLVSRFIIRR 452
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T+ LLSKYLPVK E VV + LQ LY + + S V+R ++G ++ L +I
Sbjct: 453 TNDLLSKYLPVKYEHVVFCNPSPLQSSLYNHFVNSKDVQRLLRGKDS-----QPLKAIGL 507
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTML 506
L+KLCNHP+L+ D + LP YA ++G+ +LS K +VL+ ML
Sbjct: 508 LRKLCNHPELL-----NLPDDLPGSAQFLPDDYAVG-RTGRDRSFNCQLSGKFVVLERML 561
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SN 565
IK T DKIVL+SN TQTLDL ERL +++ Y VRLDG+M++ KR+K+V+ FN
Sbjct: 562 DHIKNHTTDKIVLISNATQTLDLMERLCRVKKYGCVRLDGTMSVNKRSKIVDRFNDPEGK 621
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA+D QA+ARVWRDGQKK CFVYRF++TG
Sbjct: 622 EFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQALARVWRDGQKKECFVYRFMTTG 681
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV 685
SIEEK+ QRQ K+ LS+CVVD ED ARHF+ +LR LF+ NT+ D+HD KC RC
Sbjct: 682 SIEEKIFQRQCQKQNLSACVVDEAEDTARHFTQDDLRQLFKFHTNTLCDSHDTYKCKRCR 741
Query: 686 NGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDPILKHCWG-AGVSFVF 732
+G Q VK P + D S W+H + + D +L+ G VS+VF
Sbjct: 742 DGKQFVKAPAM---LYGDASTWNHFPNSQLGQMHDDLLRAELGFPEVSYVF 789
>gi|359475198|ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 306/687 (44%), Positives = 423/687 (61%), Gaps = 76/687 (11%)
Query: 106 PTAPNALVLYTPPQL--SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
P + LVL+ P + A +L+ I VVDP+L LRPHQREGV+FM++CV+
Sbjct: 148 PAGIDPLVLWHPEESEEQADNLMPI---------VVDPLLVRFLRPHQREGVQFMFDCVS 198
Query: 164 GVR-IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G+ + GCI+AD+MGLGKTLQ ITL++TLLRQG K ++ KAIIV P+SLV NW
Sbjct: 199 GLSSTANISGCILADDMGLGKTLQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEA 258
Query: 223 EITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL-HK 281
EI KW+G RV + + ++ ++ ++SF + P+ +L++SYETFR H+S H
Sbjct: 259 EIKKWVGERVQLVALCESTRDDVVFGIDSFTSPHS--PLQ-VLIVSYETFRMHSSKFSHS 315
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
L++CDE HRLKN ++ T +AL L KRRVLLSGTP+QNDL E+F++V+F N GIL
Sbjct: 316 GSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGIL 375
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G A FR+ YETPI+ G++ A++ E+ ER +L VN+ ++RRT+ALLS +LP K
Sbjct: 376 GDATYFRRYYETPIICGREPTAAEEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPK 435
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHPDLV 460
+VVC +++ LQ ELY + I S V++ + N ++ + L+ IT+LKKLCNHP L+
Sbjct: 436 IVEVVCCRLSPLQSELYNHFIHSKNVKKVI----NEEMKQSKILAYITALKKLCNHPKLI 491
Query: 461 MDKIQT---GADGFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMT 512
D +++ G GFE+ M P +G + ++ G+ + +ELS K+ VL +LA ++
Sbjct: 492 YDTVKSGNQGTSGFEDCMRFFPPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLAHLRQK 551
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF-NKTSNEFIFML 571
TDD+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V F + +EF+F+L
Sbjct: 552 TDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDEFVFLL 611
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK ++YRFLSTG+IEEK+
Sbjct: 612 SSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKV 671
Query: 632 MQRQAHKKALSSCVVDCEEDVAR----HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
QRQ K+ L + ++D + S +LR LF EN S+ H+K+ C+RC N
Sbjct: 672 FQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRCQNY 731
Query: 687 -----------GIQVKPPPLES---DCTD---------------------------DLSC 705
G + K +S DC D DL
Sbjct: 732 DERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTALEEDLGS 791
Query: 706 WHHVTEKRWLVDPILKHCWGAGVSFVF 732
W H + D I + G V+FVF
Sbjct: 792 WGHHFFSTSVPDAIFQASAGDEVTFVF 818
>gi|403399531|sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
Short=OsRad54
gi|144369229|dbj|BAF56217.1| OsRad54 [Oryza sativa Japonica Group]
Length = 980
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 317/744 (42%), Positives = 437/744 (58%), Gaps = 91/744 (12%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGV-RREGARKAL--HDPTAPNAL--VLYTPPQLSAHD 124
I KPFK P N GYS + RR ARK P A+ +L P +S+ D
Sbjct: 137 IARKPFKPPCQN----GYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDD 192
Query: 125 LLKI-------------------DKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTG 164
++ DK+ + VD +L LRPHQREGV+FM++CV+G
Sbjct: 193 SVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSG 252
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
+ +D GCI+AD+MGLGKTLQ ITL++TLL QG AKP++ +A++V P+SLV NW +E
Sbjct: 253 LLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE 312
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-N 282
I KWL GRV L + ++A++ + + SF++ R V L++SYETFR H+S +
Sbjct: 313 IIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPG 369
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+FS+V+F N G+LG
Sbjct: 370 SCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLG 429
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
A FR+ YE PI+ G++ AS E+ +ER +L VN ++RRT+ALLS +LP K
Sbjct: 430 DATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKI 489
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+VVC K+T LQ LY + I S V+R + G L+ IT+LKKLCNHP L+ D
Sbjct: 490 VEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS---KVLAYITALKKLCNHPKLIYD 546
Query: 463 KIQ---TGADGFENAMNILP----TGYAASYK-SGKLLIELSAKLMVLDTMLAVIKMTTD 514
I+ +G GF++ + P +G + S+ G + +ELS K+ VL +L +++ TD
Sbjct: 547 TIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTD 606
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSS 573
D+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LSS
Sbjct: 607 DRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSS 666
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGGCGLNL+G NRL++FDPDWNPAND QA ARVWRDGQKK ++YRFLSTG+IEEK+ Q
Sbjct: 667 KAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQ 726
Query: 634 RQAHKKALSSCVVDCEED---VARHFSMSELRSLFQLEENTISDTHDKIKCSRC------ 684
RQ K+ L + + D S +LR LF E S+ H+ +KC+RC
Sbjct: 727 RQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCM 786
Query: 685 -VNGIQVKPPPLESDCTD-----------------------------------DLSCWHH 708
++G + E + ++ DL W H
Sbjct: 787 VLDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGH 846
Query: 709 VTEKRWLVDPILKHCWGAGVSFVF 732
++ + D IL+ G VSFVF
Sbjct: 847 HSDPSTVPDTILQCSSGDEVSFVF 870
>gi|363754225|ref|XP_003647328.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890965|gb|AET40511.1| hypothetical protein Ecym_6118 [Eremothecium cymbalariae
DBVPG#7215]
Length = 915
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 284/555 (51%), Positives = 371/555 (66%), Gaps = 27/555 (4%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI+L+WTLLRQG +P IDK IIV PSSLV NW NEI KWLG
Sbjct: 342 AYGCIMADEMGLGKTLQCISLLWTLLRQGSQGRPTIDKCIIVCPSSLVNNWANEIVKWLG 401
Query: 230 -GRVAALPIDGGSKA----EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
++ L IDG + + + + + GR V P+L+ISYET R + +L ++V
Sbjct: 402 PNSLSPLAIDGKKSSLPNGSVSQSIKQWALSQGRNIVKPVLIISYETLRRNVDLLKHSKV 461
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
GL+L DEGHRLKN ES T+ +L + RRV+LSGTPIQNDL EYF+L+ F N G+LGT
Sbjct: 462 GLMLADEGHRLKNGESLTFTSLDSINCSRRVILSGTPIQNDLSEYFALLSFSNPGLLGTR 521
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
+FRK +E PILRG+D+ A+D E + +L+QL IV++ +IRRT+ +LSKYLP K E
Sbjct: 522 SQFRKNFELPILRGRDADATDKEIEEGQLKLQQLSQIVSKFIIRRTNDILSKYLPCKYEH 581
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
V+ + ++ +QK +Y + +KS V + +KG G L +I LKKLCNHPDL +
Sbjct: 582 VIFVNLSPMQKSIYQHFVKSRDVAKLVKG-----TGSQPLKAIGLLKKLCNHPDL----L 632
Query: 465 QTGADGFENAMNILPTGYAASYKS-------GKLLIE--LSAKLMVLDTMLAVIKMTTDD 515
Q D E +++P Y +S G I+ S K +L+ L I+ ++D
Sbjct: 633 QLPED-IEGCDHLIPEDYRSSMAQHNRSGFRGHTAIQTCYSGKFSILERFLYKIRTESND 691
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSK 574
KIVL+SNYTQTLDL E + + Y +RLDG+M+I KR K+V+ FN +EFIF+LSSK
Sbjct: 692 KIVLISNYTQTLDLIEMMCRYNHYGVLRLDGTMSINKRQKLVDRFNNPDGDEFIFLLSSK 751
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK+ QR
Sbjct: 752 AGGCGINLIGANRLILVDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIYQR 811
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
Q+ K +LSSCVVD +EDV R FS LR LFQ + T DTH C RC NG Q+
Sbjct: 812 QSMKMSLSSCVVDEKEDVERLFSSDNLRQLFQFDSVTACDTHTTFNCKRCKNGKQMVRA- 870
Query: 695 LESDCTDDLSCWHHV 709
++ D + W+H+
Sbjct: 871 -QAMLYGDATTWNHL 884
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 29/35 (82%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
V VV+DP L+ +LRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 238 VPVVIDPKLAQVLRPHQVEGVRFLYRCVTGLVMKD 272
>gi|406694411|gb|EKC97738.1| DNA recombination and repair protein Rad54B [Trichosporon asahii
var. asahii CBS 8904]
Length = 833
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/734 (43%), Positives = 440/734 (59%), Gaps = 85/734 (11%)
Query: 70 ILAKPFKVPILNYT------GGGYSTKALGVRREG--ARKALHDPTAPNALVLYTP---- 117
+ +K F +P++ S +LG R A + LHDP A +A+VLY P
Sbjct: 109 VFSKSFAIPVMTNAKTSEKIAHPLSHASLGARPHPTLAPRPLHDPMADHAIVLYDPTIDD 168
Query: 118 ---------------------PQLSAHDLLKID----KDKIQVHVVVDPVLSNILRPHQR 152
P S +L I+ K ++V VV+DP LS +LRPHQ
Sbjct: 169 KPDPEEVAQKEEAAKKEENRGPHKSLKAILGIEDKTKKKVVKVPVVIDPRLSKVLRPHQI 228
Query: 153 EGVKFMY--ECVTGVRIEDAYGCIMADEMGL---------------------GKTLQCIT 189
EGVK + +T DA + +G+ GKTLQCI
Sbjct: 229 EGVKVSLGGKALTVSSCIDARRAWLRTMLGVASWPTRWVLVSGQWQVTADVTGKTLQCIA 288
Query: 190 LMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEID 246
L+WTLL+Q P+ K +K +I P+SLV NW NE+ KWLG G V L +DG G KAE+
Sbjct: 289 LLWTLLKQSPVPGKGTCEKVVIACPTSLVGNWANELIKWLGPGAVNPLVVDGKGGKAELI 348
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+ + GR P++++SYET R+ + L +GL+L DEGHRLKN ++ T+QAL
Sbjct: 349 PAVRRWAAASGRSVTLPVMIVSYETLRTLKTELDGCPIGLLLADEGHRLKNADTLTFQAL 408
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L +RRV+L+GTPIQNDL EYF+L++F N LG+ EF+K +E ILRG+D+ A+D
Sbjct: 409 TALNVQRRVILTGTPIQNDLSEYFALLNFANPEYLGSRAEFKKNFELKILRGRDADATDK 468
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E+ +++ +L++L G+V+R +IRRT+ LLSKYLPVK E VV + LQ LY + + S
Sbjct: 469 EKEESDAKLKELGGLVSRFIIRRTNDLLSKYLPVKYEHVVFCNPSPLQSSLYNHFVNSKD 528
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
V+R ++G ++ L +I L+KLCNHP+L+ D + LP YA
Sbjct: 529 VQRLLRGKDSQ-----PLKAIGLLRKLCNHPELL-----NLPDDLPGSAQFLPEDYAVG- 577
Query: 487 KSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
++G+ +LS K +VL+ ML IK T DKIVL+SN TQTLDL ERL +++ Y VR
Sbjct: 578 RTGRDRSFNCQLSGKFVVLERMLDHIKNHTTDKIVLISNATQTLDLMERLCRVKKYGCVR 637
Query: 544 LDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
LDG+M++ KR+K+V+ FN EF+F+LSSKAGGCG+NLIGANRL++FDPDWNPA+D Q
Sbjct: 638 LDGTMSVNKRSKIVDRFNDPEGKEFVFLLSSKAGGCGINLIGANRLILFDPDWNPASDQQ 697
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A+ARVWRDGQKK CFVYRF++TGSIEEK+ QRQ K+ LS+CVVD ED ARHF+ +LR
Sbjct: 698 ALARVWRDGQKKECFVYRFMTTGSIEEKIFQRQCQKQNLSACVVDEAEDTARHFTQDDLR 757
Query: 663 SLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCWHHVTEKRW--LVDPI 719
LF+ NT+ D+HD KC RC +G Q VK P + D S W+H + + D +
Sbjct: 758 QLFKFHTNTLCDSHDTYKCKRCRDGKQFVKAPAM---LYGDASTWNHFPNSQLGQMHDDL 814
Query: 720 LKHCWG-AGVSFVF 732
L+ G VS+VF
Sbjct: 815 LRAELGFPEVSYVF 828
>gi|156845511|ref|XP_001645646.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156116312|gb|EDO17788.1| hypothetical protein Kpol_541p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 941
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 284/555 (51%), Positives = 374/555 (67%), Gaps = 31/555 (5%)
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
AYGCIMADEMGLGKTLQCI LMWTLL+QGP K LIDK IIV PSSLV NW NE+ KWLG
Sbjct: 374 AYGCIMADEMGLGKTLQCIALMWTLLKQGPQGKSLIDKCIIVCPSSLVNNWANELIKWLG 433
Query: 230 -GRVAALPIDG-------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
G ++ L IDG G A + + + S+ Q GR V P+L+ISYET R + L
Sbjct: 434 PGTLSPLAIDGKKSSITNGGNATVAHAIKSWAQAKGRNIVKPVLIISYETLRRNVDQLVN 493
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
+VGL+L DEGHRLKN +S T+ AL + RR++LSGTPIQNDL EYF+L++F N G+L
Sbjct: 494 CDVGLMLADEGHRLKNADSLTFTALDSINCPRRIILSGTPIQNDLSEYFALLNFSNPGLL 553
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G+ EFR+ +E PIL G+++ A+D K+ +L++L +V++ +IRRT+ +LSKYLP K
Sbjct: 554 GSRSEFRRNFEIPILAGREADATDEALKKSTLQLQKLSEVVSKFIIRRTNDILSKYLPCK 613
Query: 402 TEQVVCIKMTDLQKELYTNLI---KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
E V+ + M Q++LY + I K D+ + +K +I LKKLCNHPD
Sbjct: 614 YEHVIFVNMKPFQRDLYKSYIELRKDDSFEKPLK-------------AIGVLKKLCNHPD 660
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASY--KSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
L+ +++ ++++I P GY S KS + + S K +L+ L I +DDK
Sbjct: 661 LL--DLESELPEMGDSVSI-PDGYVISKNGKSKDVQPQFSGKFAILERFLHKINTESDDK 717
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKA 575
IVL+SNYTQTLDL ERL + + Y VRLDGSMTI KR K+V+ FN S+EFIF+LSSKA
Sbjct: 718 IVLISNYTQTLDLVERLCRRKQYGSVRLDGSMTINKRQKLVDRFNSPDSHEFIFLLSSKA 777
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF++TG+IEEK+ QRQ
Sbjct: 778 GGCGINLIGANRLILLDPDWNPAADQQALARVWRDGQKKDCFIYRFIATGTIEEKVYQRQ 837
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPL 695
+ K +LSSCVVD +EDV R F+ +L+ LF L E T DTH+ C RC N +
Sbjct: 838 SMKMSLSSCVVDAKEDVDRLFTADDLKKLFLLNEKTQCDTHETFNCKRC-NKFGKQIIRS 896
Query: 696 ESDCTDDLSCWHHVT 710
++ D + W+H+
Sbjct: 897 KTMLYGDATSWNHLN 911
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
+ VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D ++GL
Sbjct: 252 IPVVIDPRLAKILRPHQVEGVRFLYRCVTGLIMKDYLDSEAVKKLGL 298
>gi|302655807|ref|XP_003019687.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517]
gi|291183425|gb|EFE39042.1| hypothetical protein TRV_06277 [Trichophyton verrucosum HKI 0517]
Length = 629
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 282/563 (50%), Positives = 368/563 (65%), Gaps = 42/563 (7%)
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAII 210
Q + +F+Y C TG+ ++A+GCIMAD + KA+I
Sbjct: 68 QPQKSEFLYRCTTGLVDKNAHGCIMAD---------------------------VQKAVI 100
Query: 211 VAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
P++LV NW NE+ KWLG + IDG SK E+ ++L + GR V P+L++S
Sbjct: 101 ACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELTSQLRQWAIASGRSVVRPVLIVS 160
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
YET R ++ L ++GL+LCDEGHRLKN +SQTY AL L ++RV+LSGTPIQNDL E
Sbjct: 161 YETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTPIQNDLSE 220
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
YFSL+ F N GILG+ EF K YE PILRG+D+ +D ++ K NERL +L+ +VN+ +IR
Sbjct: 221 YFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQKKGNERLAELLNLVNKFIIR 280
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
R++ LLSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I
Sbjct: 281 RSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGK-----GSQPLKAIG 335
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
LKKLCNHPDL+ K+ G E T ++ S K+MVLD MLA
Sbjct: 336 ILKKLCNHPDLL--KLSEDLPGCEQYFPEDMTVSNGRRGDREVKTWYSGKMMVLDRMLAR 393
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEF 567
I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M +KKR+K+V+ FN EF
Sbjct: 394 IRQDTNDKIVLISNYTQTLDLFERLCRARAYGCIRLDGTMGVKKRSKLVDKFNDPNGEEF 453
Query: 568 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
+F+LSSKAGGCG+NL+GANRLV+FDPDWNPA D QA+ARVWRDGQ K CFVYRF++TG+I
Sbjct: 454 VFLLSSKAGGCGINLVGANRLVLFDPDWNPAADQQALARVWRDGQSKDCFVYRFIATGTI 513
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCV-N 686
EEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD KC RC +
Sbjct: 514 EEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPGTTSDTHDTFKCKRCRPD 573
Query: 687 GIQ-VKPPPLESDCTDDLSCWHH 708
G Q +K P + D S W+H
Sbjct: 574 GTQHIKAPAM---LYGDTSSWNH 593
>gi|449445882|ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
gi|449497618|ref|XP_004160452.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/683 (44%), Positives = 420/683 (61%), Gaps = 72/683 (10%)
Query: 106 PTAPNALVLYTP--PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
P + LVL+ P +L+ +L I VDP+L LRPHQREGV+FM+ECV+
Sbjct: 147 PPGIDPLVLWQPEDSELNVTNLASI---------TVDPLLVRFLRPHQREGVQFMFECVS 197
Query: 164 GV-RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G+ + D +GCI+AD+MGLGKTLQ I+L++TLL QG KP++ KAIIV P+SLV NW
Sbjct: 198 GLHKGTDIFGCILADDMGLGKTLQSISLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEA 257
Query: 223 EITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
EI KW+G RV + + S+ ++ + ++SF+ V L+ISYETFR H+S ++
Sbjct: 258 EIKKWVGERVHLIALCESSREDVVSSIDSFVHPKSSLQV---LIISYETFRMHSSKFSQS 314
Query: 283 E-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
E L++CDE HRLKN ++ T +AL L +RRVLLSGTP+QNDL E+F++V+F N GIL
Sbjct: 315 ESCDLLICDEAHRLKNDQTLTNRALAALSCRRRVLLSGTPMQNDLEEFFAMVNFTNPGIL 374
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G FR+ YE PI+ G++ A++ E+ +R +L VN+ ++RRT+ALLS +LP K
Sbjct: 375 GDVSHFRRYYEAPIICGREPIATEEEKKLGAQRSTELSEKVNQFILRRTNALLSNHLPPK 434
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
+V+C K++ LQ +LY + ++S V+R + E K L+ IT+LKKLCNHP L+
Sbjct: 435 IVEVICCKLSPLQADLYNHFVQSKNVKRAIT--EELKQA-KILAYITALKKLCNHPKLIY 491
Query: 462 DKIQTGA---DGFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMTT 513
D I++G+ G E+ + P +G + ++ G +ELS K+ VL +LA ++ T
Sbjct: 492 DTIKSGSPGTSGLESCIRFFPPEMFSGRSGAWTGGDGAWVELSGKMHVLARLLAHLRQRT 551
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLS 572
DD+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LS
Sbjct: 552 DDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSISKRQKLVNRFNDLSKDEFVFLLS 611
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK F+YRFLSTG+IEEK+
Sbjct: 612 SKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVFIYRFLSTGTIEEKVY 671
Query: 633 QRQAHKKALSSCVVDCEED----VARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
QRQ K+ L + + S +LR LF +N S+ H+K+ CSRC N
Sbjct: 672 QRQMSKEGLQKVIQQESTNNLTTQVNFLSSEDLRDLFSFHDNVRSEIHEKMNCSRCQNCY 731
Query: 689 QVKPP----------PLESD--------------CTD---------------DLSCWHHV 709
+P P +SD C D DL W H
Sbjct: 732 G-RPEDMDENLSTNGPCQSDQVTSDIGGFAQLAGCLDKLKKSEQQVGSPLEEDLGNWGHH 790
Query: 710 TEKRWLVDPILKHCWGAGVSFVF 732
+ + D IL+ G V+FVF
Sbjct: 791 FDSTTVPDTILQASAGDEVTFVF 813
>gi|361128810|gb|EHL00736.1| putative DNA repair protein rhp54 [Glarea lozoyensis 74030]
Length = 643
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/682 (44%), Positives = 396/682 (58%), Gaps = 118/682 (17%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
+ K F VP++N Y+ LG+R +GA KALHDP+ A+VLY P
Sbjct: 1 MFRKRFAVPLINKDSVTYNPNRPPPTLGLR-QGAVFIAKALHDPSGEFAIVLYDPTIDEK 59
Query: 118 ---------------PQLSA-------HDLLKIDK----DKIQVHVVVDPVLSNILRPHQ 151
P++ A ++L I K ++ +V VV+DP LS +LRPHQ
Sbjct: 60 PKTIEEAKKADAPEAPKIDAPLVHKTLAEILGIKKVVEGERPKVPVVIDPRLSKVLRPHQ 119
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIV 211
EGVKFMY+CVTG+ E A GCIMAD
Sbjct: 120 IEGVKFMYKCVTGMIEEKANGCIMADA--------------------------------- 146
Query: 212 APSSLVKNWCNEITKWLGGRVAALPIDGG-SKAEIDNKLNSFMQTYGRRPVNPILVISYE 270
+ IDG SK E+ +++ + GR P++++SYE
Sbjct: 147 --------------------IQPFAIDGKLSKEELTSQIRQWAIASGRAVTRPVIIVSYE 186
Query: 271 TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
T R + L ++GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPIQNDL EYF
Sbjct: 187 TLRLNVGELKNTKIGLMLCDEGHRLKNGDSQTFTALNELNVTRRVILSGTPIQNDLSEYF 246
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT 390
+L+ F N G+LGT EFRKQYE PIL+G+D+ SD +R K +ERL +L+ +VN+ +IRRT
Sbjct: 247 ALISFANPGLLGTRLEFRKQYEIPILKGRDAAGSDKDRQKGDERLRELLNVVNKFIIRRT 306
Query: 391 SALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSL 450
+ +LSKYLPVK E VV + Q +LY + I S ++ ++G G L +I L
Sbjct: 307 NDILSKYLPVKYEHVVFCNLAPFQLDLYNHFISSPDIKALLRGK-----GSQPLKAIGML 361
Query: 451 KKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLA 507
KKLCNHPDL+ D N P Y G+ + S K+ VLD MLA
Sbjct: 362 KKLCNHPDLL-----NLPDDLPGCENFYPEDYVPKDARGRDRDIKPWYSGKMQVLDRMLA 416
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-E 566
I+ T+DKIVL+SNYTQTLD+F++L + RGY +RLDG+M + KR K+V+ FN E
Sbjct: 417 RIRQDTNDKIVLISNYTQTLDMFDKLCRHRGYGSLRLDGTMNVSKRQKLVDKFNDPDGAE 476
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F+F+LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+
Sbjct: 477 FVFLLSSKAGGCGLNLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGT 536
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
IEEK+ QRQ+HK++LSSCVVD EDV RHF++ LR LFQ T SDTHD KC R
Sbjct: 537 IEEKIFQRQSHKQSLSSCVVDSAEDVERHFTLDSLRELFQYHGKTTSDTHDTFKCKRS-- 594
Query: 687 GIQVKPPPLESDCTDDLSCWHH 708
P + D S W+H
Sbjct: 595 ------PAM---MYGDTSTWNH 607
>gi|145338703|ref|NP_188552.3| Rad54-like protein [Arabidopsis thaliana]
gi|112419506|dbj|BAF03042.1| Rad54 [Arabidopsis thaliana]
gi|116518260|gb|ABJ99465.1| RAD54-like protein [Arabidopsis thaliana]
gi|332642687|gb|AEE76208.1| Rad54-like protein [Arabidopsis thaliana]
Length = 910
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 301/655 (45%), Positives = 409/655 (62%), Gaps = 48/655 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
+ KPFK P GY + RR ARK + +V+ P +L A ++ D
Sbjct: 84 VCRKPFKPPC----SHGYDSTGQLSRRLSARKRFVPWGSSTPVVVALPTKLEASTNIERD 139
Query: 130 KDKIQV-----------------------HVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
+++ V ++V VL LRPHQREGV+FM++CV+G+
Sbjct: 140 EEEEVVCLPPDIEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLH 199
Query: 167 -IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
+ GCI+AD+MGLGKTLQ ITL++TLL QG P++ KAIIV P+SLV NW EI
Sbjct: 200 GSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIK 259
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-V 284
KW+G R+ + + ++ ++ + ++SF + R +L+ISYETFR H+S ++E
Sbjct: 260 KWVGDRIQLIALCESTRDDVLSGIDSFTRP---RSALQVLIISYETFRMHSSKFCQSESC 316
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDE HRLKN ++ T +AL L KRRVLLSGTP+QNDL E+F++V+F N G LG A
Sbjct: 317 DLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDA 376
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
FR YE PI+ G++ A++ E+ A +R +L VN+ ++RRT+ALLS +LP K +
Sbjct: 377 AHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIE 436
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
VVC KMT LQ LY + I S ++R + +N K L+ IT+LKKLCNHP L+ D I
Sbjct: 437 VVCCKMTTLQSTLYNHFISSKNLKRAL--ADNAK-QTKVLAYITALKKLCNHPKLIYDTI 493
Query: 465 QTGAD---GFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMTTDDK 516
++G GFEN + P +G + ++ G +ELS K+ VL +LA ++ TDD+
Sbjct: 494 KSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDR 553
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKA 575
IVLVSNYTQTLDLF +L + R Y ++RLDGS TI KR K+V N T +EF F+LSSKA
Sbjct: 554 IVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKA 613
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLV+FDPDWNPAND QA ARVWRDGQKK +VYRFLSTG+IEEK+ QRQ
Sbjct: 614 GGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQ 673
Query: 636 AHKKALSSCVVDCEEDVARH----FSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
K+ L + + D + S +LR LF + S+ H+K+ CSRC N
Sbjct: 674 MSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQN 728
>gi|156086958|ref|XP_001610886.1| DNA repair and recombination protein RAD54-like [Babesia bovis
T2Bo]
gi|154798139|gb|EDO07318.1| DNA repair and recombination protein RAD54-like , putative [Babesia
bovis]
Length = 824
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 306/672 (45%), Positives = 407/672 (60%), Gaps = 41/672 (6%)
Query: 73 KPFKVPILNYTGGGYST---KALGVR-REGAR--KALHDPTAP--------------NAL 112
+PFK P+ + G K LG R R R LH P N L
Sbjct: 54 QPFKSPVEGHLPGVSELAKRKTLGCRIRNLGRPLNLLHSPVGAAKPTEADDSSLPPVNPL 113
Query: 113 VLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYG 172
VLYT P+ + ++QV + VDP+LS LR HQR+GV+F+++C+ G++ + G
Sbjct: 114 VLYTSPEDA----------EVQVKIEVDPMLSRFLRDHQRQGVQFVFDCLMGLKEFNGQG 163
Query: 173 CIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRV 232
CI+AD+MGLGKTLQ IT+MWTLL G KP K IV P+SLV NW +EI KWL G+
Sbjct: 164 CILADDMGLGKTLQSITVMWTLLNNGLNGKPAARKCAIVCPASLVNNWESEIKKWLKGKC 223
Query: 233 AALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEG 292
+ G K ++ +K F Y R+ + +++ SYETFR HA L + LV+CDE
Sbjct: 224 PCTAVAEGVKEKVVSKFTGF--KYDRQ--SNVIISSYETFRLHAKKLEGVPIDLVICDEA 279
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
HRLKN ++ T A+ L AK R++LSGTPIQNDL E+++LV N +LG FRK Y
Sbjct: 280 HRLKNDKTLTSVAIQNLPAKMRLMLSGTPIQNDLNEFYALVSLCNPNVLGDISNFRKHYA 339
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PIL G++ A+ A++ A ERL L I N+ ++RRT+ LLSK LP K V +T+
Sbjct: 340 NPILLGREPDATKAQQEIAAERLADLSYITNQFVLRRTNTLLSKVLPPKINMNVFCNLTE 399
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMT-ALSSITSLKKLCNHPDLVMDKIQTGADGF 471
QK +YT+ S + R+ + GE + MT +L I SL K+CNHP L+
Sbjct: 400 TQKIIYTSYTNSASCRKLINSGE---VVMTKSLGVILSLMKVCNHPGLIKPSPSKKPTKA 456
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
+ + + Y K+ ELSAK +VL +L I+ TT D+IV++SNYTQTLD+FE
Sbjct: 457 DELIKEIHANYNTLQKNRSCYPELSAKTLVLFRLLHNIRRTTSDRIVIISNYTQTLDVFE 516
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVM 590
R+ K Y VRLDG+++IKKR K+V TFN S+ F F+LSSKAGGCG+NLIGANRLV+
Sbjct: 517 RMCKQCNYPCVRLDGTLSIKKRHKLVTTFNDPNSHSFAFLLSSKAGGCGINLIGANRLVL 576
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCE 649
FDPDWNPAND QA+ARVWRDGQ+K C++YRF STG+IEEK+ QRQ K LS+ +V D E
Sbjct: 577 FDPDWNPANDKQALARVWRDGQRKTCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVTDGE 636
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
++ S LR+LF+ +E+TISDTHD + C+RC N P DDL W H
Sbjct: 637 NEIKDSLSGEYLRNLFEFKEDTISDTHDSLSCTRC-NETTGHVPQTADFVEDDLLTWAHH 695
Query: 710 TEKRWLVDPILK 721
T+ L DP LK
Sbjct: 696 TDLNTLPDPCLK 707
>gi|357143796|ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Brachypodium distachyon]
Length = 965
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 295/655 (45%), Positives = 407/655 (62%), Gaps = 65/655 (9%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY-GCIMADEMGLGKTLQCITLMWTLL 195
+ VD +L LRPHQREGV+FM++CV+G+ +D GCI+AD+MGLGKTLQ I L++TLL
Sbjct: 211 IEVDNLLVRYLRPHQREGVQFMFDCVSGLLSDDGIAGCILADDMGLGKTLQSIALLYTLL 270
Query: 196 RQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
QG KP++ +A+IV P+SLV NW +EI+KWL G+V L + ++A++ + + SF++
Sbjct: 271 AQGFDGKPMVKRAVIVTPTSLVSNWESEISKWLKGKVQLLALCESTRADVLSGIGSFLKP 330
Query: 256 YGRRPVNPILVISYETFRSHASVLHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
R V L+ISYETFR H+S + L++CDE HRLKN ++ T +AL L RR
Sbjct: 331 LSRLQV---LIISYETFRMHSSKFERPASCDLLICDEAHRLKNDQTLTNKALAALPCTRR 387
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
+LLSGTP+QNDL E+FS+V+F N G+LG A FR+ YE PI+ G++ A+ E+ +ER
Sbjct: 388 ILLSGTPMQNDLEEFFSMVNFTNPGVLGDAAYFRRYYEAPIICGREPTATAEEKKLGSER 447
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+L VN+ ++RRT+ALLS +LP K +VVC K+T LQ LY + I S V+R +
Sbjct: 448 SGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQTTLYNHFIHSKNVKRLIS-- 505
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKI---QTGADGFENAMNILP----TGYAASYK 487
E K L+ IT+LKKLCNHP L+ D I ++G F++ + P G + S+
Sbjct: 506 EEAKRSKI-LAYITALKKLCNHPKLIYDTIKSNKSGGSDFDDCLRFFPPELFQGRSGSWT 564
Query: 488 -SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
G + +ELS K+ VL +L +++ TDD+IVLVSNYTQTLDLF +L + R Y YVRLDG
Sbjct: 565 GGGGMWVELSGKMHVLARLLGHLRLKTDDRIVLVSNYTQTLDLFAQLCRERRYPYVRLDG 624
Query: 547 SMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+ +I KR K+V FN S +EF+F+LSSKAGGCGLNL+G NRLV+FDPDWNPAND QA A
Sbjct: 625 ATSINKRQKLVNQFNDLSRDEFVFLLSSKAGGCGLNLVGGNRLVLFDPDWNPANDKQAAA 684
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE-----EDVARHFSMSE 660
RVWRDGQKK ++YRFLSTG+IEEK+ QRQ K+ L + + +D S +
Sbjct: 685 RVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQQEQGNTKMQDQGCSLSTED 744
Query: 661 LRSLFQLEENTISDTHDKIKCSRC-------VNGIQVKPPPLE----------------- 696
LR LF E S+ H+ +KC+RC ++G ++ +E
Sbjct: 745 LRDLFTFHEQVRSEIHENLKCNRCNKDSYMLLDGNSLESAAIEHNKISTSGEKYYTDIGG 804
Query: 697 ----SDCT---------------DDLSCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
S C +DL W H ++ + D IL+ G VSFVF
Sbjct: 805 FGEISGCVQKMNSSNQQIDQPSEEDLGSWGHHSDPSTVPDTILQSSAGDEVSFVF 859
>gi|303279422|ref|XP_003059004.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460164|gb|EEH57459.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 1131
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/741 (42%), Positives = 433/741 (58%), Gaps = 70/741 (9%)
Query: 70 ILAKPFKVPILNYTGGGYS--TKALGVRRE----GARKALHDPTAPNALVLYTPPQLSAH 123
+LA+PF+ P T G + K L ++R G K + P + ++ P +
Sbjct: 80 VLARPFRAPFAGATAGHSAELAKRLAMKRRFVPWGGTKNIAHAGRPMQIGSFSSPMHAKK 139
Query: 124 D-------------LLKIDKDK-IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
+ +L D D +VVD +L LRPHQREGVKFM+ECV G+R D
Sbjct: 140 EEKEEELPEGVEPLVLWEDADGGTNRPIVVDNMLVKWLRPHQREGVKFMFECVMGLRDFD 199
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWL 228
GCI+AD+MGLGKTLQ ITL+WT+L QG + P +A+IV P+SLV NW +E KWL
Sbjct: 200 GRGCILADDMGLGKTLQGITLLWTMLCQGVVTGTPTAKRALIVCPTSLVSNWDDECNKWL 259
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL-HKNEVGLV 287
GRV LPI S+A++ + +N F+ R ++++SYETFR HA ++ V LV
Sbjct: 260 KGRVKTLPICESSRADVISSVNRFLSP---RNTAQVMIVSYETFRIHAERFGAEDSVQLV 316
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDE HRLKN ++ T +AL + +RRV+LSGTP+QN L E++S+V+F N G+LGT EF
Sbjct: 317 MCDEAHRLKNGDTLTNKALQSVPCRRRVMLSGTPMQNHLDEFYSMVNFCNPGLLGTTAEF 376
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
K YE PIL G++ A++ + A ER +L +VN+ ++RRT+ +LSK+LP K +VVC
Sbjct: 377 HKHYEKPILDGREPDATEKQLALAQERNAELSELVNKFVLRRTNTILSKHLPPKVVEVVC 436
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ-- 465
K++ LQ++LY + + S A + + G L++IT+LKKLCNHP L+ D I
Sbjct: 437 CKLSPLQQQLYQHFLDSKAAKAALTGKST-----MVLAAITALKKLCNHPKLIYDMINAE 491
Query: 466 ----TGADGFEN-AMNILPTGYAASYKSGKLLIEL-------SAKLMVLDTMLAVIKMTT 513
+ A GFE+ P Y G+ + S K VL +LA+++ T
Sbjct: 492 KNTGSAAAGFESCGAYFQPGMYDVRGPHGRGKSGMCDGWEFHSGKFAVLARLLAILRAET 551
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLS 572
D+IV++SNYTQTLDL + L K Y + RLDG +I KR K+V FN T N F+F+LS
Sbjct: 552 KDRIVIISNYTQTLDLVQFLCKQNNYPHCRLDGGTSITKRQKLVRQFNDPTENCFVFLLS 611
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGGCG+NLIG NRLV+FDPDWNPAND QA AR WRDGQKK C++YR +TGSIEEK+
Sbjct: 612 SKAGGCGINLIGGNRLVLFDPDWNPANDKQAAARCWRDGQKKKCYLYRLFATGSIEEKVF 671
Query: 633 QRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN----- 686
QRQ K++L + VV+ E + + S +LR LF L+ T+SDTHD + C +C
Sbjct: 672 QRQLSKESLQN-VVNGEGTLEQSSLSKDDLRKLFTLDATTVSDTHDSVACEKCPGKHYDG 730
Query: 687 -----GIQVKPPPLES-----DCTDD-----LSCWHHVTEKRWLVDPILKHCWGAGVSFV 731
G+ P + + DD L W H L DPI++ G VSFV
Sbjct: 731 LHGQAGVTGSGGPADDFQPWEEQDDDAEEQKLETWGHHHRACTLPDPIMRRAAGDDVSFV 790
Query: 732 FYQHSTKAEKSKVVTEEEEKE 752
F S + E +V E +K+
Sbjct: 791 F---SLQVEGCAIVEEASKKK 808
>gi|297834836|ref|XP_002885300.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
gi|297331140|gb|EFH61559.1| hypothetical protein ARALYDRAFT_479436 [Arabidopsis lyrata subsp.
lyrata]
Length = 910
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 298/655 (45%), Positives = 409/655 (62%), Gaps = 48/655 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
+ KPFK P GY++ RR ARK + +V+ P +L A ++ D
Sbjct: 84 VCRKPFKPPC----SHGYNSTGKLSRRLSARKRFVPWGSSTPVVVALPTKLEASTNIEKD 139
Query: 130 KDKIQV-----------------------HVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
+++ V ++V +L LRPHQREGV+FM++CV+G+
Sbjct: 140 EEEEVVCLPPDIEPLILWQSEEDGMSNVTTIMVHSLLVQFLRPHQREGVQFMFDCVSGLH 199
Query: 167 -IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
E+ GCI+AD+MG GKTLQ ITL++TLL QG P++ KAIIV P+SLV NW EI
Sbjct: 200 GSENINGCILADDMGFGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIK 259
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-V 284
KW+G R+ + + ++ ++ + ++SF + R +L+ISYETFR H+S ++E
Sbjct: 260 KWVGDRIQLIALCESTRDDVLSGIDSFTRP---RSALQVLIISYETFRMHSSKFCQSESC 316
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDE HRLKN ++ T +AL L KRRVLLSGTP+QNDL E+F++V+F N G LG A
Sbjct: 317 DLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDA 376
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
FR YE PI+ G++ A++ E+ A +R +L VN+ ++RRT+ALLS +LP K +
Sbjct: 377 AHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIE 436
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
VVC KMT LQ LY + I S ++R + +N K L+ IT+LKKLCNHP L+ D I
Sbjct: 437 VVCCKMTTLQSTLYNHFISSKNLKRAL--ADNAK-QTKVLAYITALKKLCNHPKLIYDTI 493
Query: 465 QTGAD---GFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMTTDDK 516
++G+ GFEN + P +G + ++ G +ELS K+ VL +LA ++ T+D+
Sbjct: 494 KSGSPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTNDR 553
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKA 575
IVLVSNYTQTLDLF +L + R Y ++RLDGS TI KR K+V N T +EF F+LSSKA
Sbjct: 554 IVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKA 613
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLV+FDPDWNPAND QA ARVWRDGQKK +VYRFLSTG+IEEK+ QRQ
Sbjct: 614 GGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQ 673
Query: 636 AHKKALSSCV----VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
K+ L + D S +LR LF + S+ H+K+ C+RC N
Sbjct: 674 MSKEGLQKVIQHEQTDNNTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCNRCQN 728
>gi|145349626|ref|XP_001419229.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579460|gb|ABO97522.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 983
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 298/649 (45%), Positives = 396/649 (61%), Gaps = 39/649 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+VVD +L+ LRPHQREGVKFM+ECV G+R + GCI+AD+MGLGKTLQ ITL+WTLL+
Sbjct: 165 IVVDRMLTRWLRPHQREGVKFMFECVMGLRDFEGQGCILADDMGLGKTLQGITLLWTLLK 224
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
QG P + +A+IV P+SLV NW +E KWL GRV LPI ++AE+ ++S Q
Sbjct: 225 QGIDGTPAVKRALIVCPTSLVSNWDDECNKWLNGRVKTLPICDSTRAEV---VSSVKQFL 281
Query: 257 GRRPVNPILVISYETFRSHASVLH-KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
R + ++++SYETFR H+ + V L++CDE HRLKN E+ T +AL + RRV
Sbjct: 282 APRHLAQVMIVSYETFRIHSDRFNFDGAVDLIMCDEAHRLKNGETLTNKALCSVPCLRRV 341
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSGTP+QN L E++S+V F N G+LGT EF K++E PIL G++ A++ E +A E
Sbjct: 342 MLSGTPMQNHLDEFYSMVGFCNPGLLGTPPEFAKKFERPILAGREPDATEKELERAQEAN 401
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
+L +VN+ ++RRT+ +LSK+LP K +VVC K++ LQ+ LY + + S A + + G
Sbjct: 402 SELSDLVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQALYEHFLTSKAANQALTGK- 460
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQ----TG--ADGFENAMNILPTGY------- 482
L +IT+LKKLCNHP L+ D I TG A GF G
Sbjct: 461 ----ATAVLPAITALKKLCNHPKLIYDMINGAKNTGQAASGFSTCAEFFTPGMYDGGGGR 516
Query: 483 --AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
E S K VL +LA ++ T D+IV++SNYTQTLDL + + R Y
Sbjct: 517 SGRGGGGMMHGWEEHSGKFAVLARLLANLRAETKDRIVIISNYTQTLDLVGNMCRERNYP 576
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
+VRLDGS +I KR K+V+ FN TSN F+F+LSSKAGGCG+NLIG NRLV+FDPDWNPAN
Sbjct: 577 FVRLDGSTSIGKRQKLVKQFNDPTSNSFVFLLSSKAGGCGINLIGGNRLVLFDPDWNPAN 636
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D QA AR WRDGQKK C++YRFL+ G+IEEK+ QRQ K++L + V E S
Sbjct: 637 DKQAAARCWRDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVVNGSGELEQSVMSKD 696
Query: 660 ELRSLFQLEENTISDTHDKIKCSRCV--NGIQVKPPP--------LESDCTDD--LSCWH 707
ELR LF L+ T SDTHD C RC NG + P + D D+ L W
Sbjct: 697 ELRKLFSLDCTTYSDTHDTCGCKRCPARNGDDLGCDPDAEYKEWEEQIDDADEQKLDEWA 756
Query: 708 HVTEKRWLVDPILKHCWGAGVSFVFYQHSTKA--EKSKVVTEEEEKEEE 754
H + D ++K G VSFVF A ++SK E+K EE
Sbjct: 757 HHHRMDKVPDDMMKKSAGEDVSFVFSLKVEGAAIDESKKAPAPEKKSEE 805
>gi|255555479|ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
gi|223542157|gb|EEF43701.1| DNA repair and recombination protein RAD54B, putative [Ricinus
communis]
Length = 940
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 280/566 (49%), Positives = 381/566 (67%), Gaps = 21/566 (3%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVR-IEDAYGCIMADEMGLGKTLQCITLMWT 193
+ ++VD +L LRPHQREGV+FM++CV+G+ + GCI+AD+MGLGKTLQ ITL++T
Sbjct: 178 IPIIVDSLLVQFLRPHQREGVQFMFDCVSGLHSAANINGCILADDMGLGKTLQSITLLYT 237
Query: 194 LLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM 253
LL QG KP++ KAIIV P+SLV NW EI KW+G V + + ++ ++ + ++SF
Sbjct: 238 LLGQGFDDKPMVRKAIIVTPTSLVSNWEAEIKKWVGESVKLIALCETTRDDVVSGIDSFA 297
Query: 254 QTYGRRPVNPILVISYETFRSHASVL-HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R +L++SYETFR H+S H L++CDE HRLKN ++ T +AL L K
Sbjct: 298 NP---RSNLQVLIVSYETFRMHSSKFSHDESCDLLICDEAHRLKNDQTLTNRALAALSCK 354
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RR+LLSGTP+QNDL E+F++V+F N GILG A FR+ YETPI+ G++ A++ E+
Sbjct: 355 RRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYETPIICGREPTATEEEKKLGA 414
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
ER +L VN+ ++RRT+ALLS +LP K +VVC K+T LQ ELY + I S V+R +
Sbjct: 415 ERSGELSAKVNQFILRRTNALLSNHLPPKIVEVVCCKLTPLQSELYNHFIHSKNVKRAIT 474
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT---GADGFENAMNILP----TGYAAS 485
E TK L+ IT+LKKLCNHP L+ D I++ G GFE+ + P +G + +
Sbjct: 475 --EETKKS-KILAYITALKKLCNHPKLIYDTIRSGTPGTSGFEDCIRFFPPGMFSGRSGT 531
Query: 486 YKSGK-LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
+ G IELS K+ VL +LA ++ TDD+IVLVSNYTQTLDLF +L + R Y ++RL
Sbjct: 532 WSGGDGSWIELSGKMHVLARLLAHLRQRTDDRIVLVSNYTQTLDLFAQLCRERRYPHLRL 591
Query: 545 DGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DG+ +I KR K+V FN S +EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA
Sbjct: 592 DGATSIGKRQKLVNRFNDQSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQA 651
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV----ARHFSMS 659
AR+WRDGQKK ++YRFLSTG+IEEK+ QRQ K+ L + + D S
Sbjct: 652 AARIWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQNDSTISEGNFLSTE 711
Query: 660 ELRSLFQLEENTISDTHDKIKCSRCV 685
+LR LF + S+ H+K+ C RC+
Sbjct: 712 DLRDLFTFYGDIRSEIHEKMNCDRCL 737
>gi|255082185|ref|XP_002508311.1| SNF2 super family [Micromonas sp. RCC299]
gi|226523587|gb|ACO69569.1| SNF2 super family [Micromonas sp. RCC299]
Length = 1126
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 296/649 (45%), Positives = 410/649 (63%), Gaps = 43/649 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V VD +L LRPHQREGVKFM+ECV G+R + GCI+AD+MGLGKTLQ ITL+WTLL+
Sbjct: 166 VSVDNMLVKFLRPHQREGVKFMFECVMGLRGFEGNGCILADDMGLGKTLQGITLLWTLLK 225
Query: 197 QGPLAK-PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
QG P+ +A+IV P+SLV NW +E KWL G+V +PI ++A++ + +N F+
Sbjct: 226 QGITGDGPIAKRALIVCPTSLVSNWDDECIKWLKGKVRTMPICEANRADVISSMNRFLNY 285
Query: 256 YGRRPVNPILVISYETFRSHASVLHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
G ++++SYETFR HA K N V L++CDE HRLKN ++ T +AL + RR
Sbjct: 286 NGHDRAQ-VMIVSYETFRIHADRFDKPNSVDLIICDEAHRLKNGDTLTNKALGSVPCLRR 344
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
V+LSGTP+QN L E++S+V+F N G+LGT EF K++E PIL G++ A++ + A ER
Sbjct: 345 VMLSGTPMQNHLDEFYSMVNFCNPGLLGTGGEFYKKFEKPILDGREPDATEKQLALAQER 404
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+L +VN+ ++RRT+ +LSK+LP K +VVC K++ LQ+ +Y + + S+ +T+ G
Sbjct: 405 NGELSELVNKFVLRRTNTILSKHLPPKVVEVVCCKLSPLQQMIYRHFL-SEKAAKTIATG 463
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQT------GADGFENAMNILPTGYAASYKS 488
++ + L++IT LKKLCNHP L+ D I GA GFE+ + G S
Sbjct: 464 KSAMV----LAAITGLKKLCNHPKLIHDMISAAKTTNKGAAGFESCADFFGDGLYDSGAR 519
Query: 489 GKLLI----------EL-SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
G EL S K VL +LA+++ T D++V++SNYTQTLDL + L +
Sbjct: 520 GHGRERGGGGLPEGWELHSGKFAVLARLLAILRKETKDRVVIISNYTQTLDLIQTLCRNN 579
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y + RLDGS +I KR K+V+ FN + + F+F+LSSKAGGCG+NLIG NRLV+FDPDWN
Sbjct: 580 RYPFCRLDGSTSISKRQKLVKRFNDPAEDCFVFLLSSKAGGCGINLIGGNRLVLFDPDWN 639
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PAND QA AR WRDGQKK C++YRFL+TGSIEEK+ QRQ K++L + V E
Sbjct: 640 PANDKQAAARCWRDGQKKKCYLYRFLATGSIEEKVFQRQLSKESLQNVVNG--EGTLEQS 697
Query: 657 SMS--ELRSLFQLEENTISDTHDKIKCSRC-------VNGIQVKPPPLESD---CTDDLS 704
SMS ELR LF L++ T+SDTHD C +C ++G E D DL+
Sbjct: 698 SMSKEELRRLFTLDDGTVSDTHDCGGCDKCPSKNFEGLHGSADGQTWEEQDDDAVETDLN 757
Query: 705 CWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKSKVVTEEEEKEE 753
W H + DPI++ G VSFVF S + E +V +E+ KE+
Sbjct: 758 TWGHHHRMDQVPDPIMRRAAGDDVSFVF---SLQVEGCAIVDKEKPKED 803
>gi|164660184|ref|XP_001731215.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966]
gi|159105115|gb|EDP44001.1| hypothetical protein MGL_1398 [Malassezia globosa CBS 7966]
Length = 713
Score = 530 bits (1365), Expect = e-147, Method: Compositional matrix adjust.
Identities = 282/568 (49%), Positives = 373/568 (65%), Gaps = 50/568 (8%)
Query: 88 STKALGVRR--EGARKALHDPTAPNALVLYTP---------------------------- 117
S ALGVRR E + LHDP + +++VL+ P
Sbjct: 145 SHAALGVRRPVEVPPRPLHDPMSEHSIVLFDPTIDDKDIESEREKLRLAFEEQQKKEEKR 204
Query: 118 -PQLSAHDLLKIDKDKI----QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYG 172
P + +L I+K + +V VV+DP L ILRPHQ EGVKF++ C TG+ E+A+G
Sbjct: 205 GPHKNLATILGINKPHMPIRDKVPVVIDPRLGKILRPHQIEGVKFLFRCTTGMVSENAHG 264
Query: 173 CIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
CIMADEMGLGKTLQCITL+WTLL+Q P A K I KAI+V PSSLV+NW NE+ KWLG
Sbjct: 265 CIMADEMGLGKTLQCITLLWTLLKQSPNAGKSTIQKAIVVCPSSLVRNWANELVKWLGAS 324
Query: 232 V-AALPIDGG-SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLC 289
+L +DG S+ ++ + + GR V+P++++SYET R+ +L E+GL+LC
Sbjct: 325 APGSLALDGRLSREQMFESVQRWADCSGRAIVHPVMIVSYETLRNLQELLGNTEIGLLLC 384
Query: 290 DEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRK 349
DEGHRLKN +S T+Q+L LK KRRV+LSGTPIQNDL EYF+L++F +LG EFRK
Sbjct: 385 DEGHRLKNADSMTFQSLAMLKVKRRVILSGTPIQNDLSEYFALINFAIPDMLGNRNEFRK 444
Query: 350 QYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIK 409
+E ILRG+D+ A++ E+ E+L+QL G+V+ +IRRT+ +LSKYLPVK E VV +
Sbjct: 445 HFELDILRGRDAGATEKEKEVGREKLQQLSGMVSPFIIRRTNDILSKYLPVKYEHVVFCR 504
Query: 410 MTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD 469
++ Q +LY ++S + R ++G +G L +I LKKLCNHPDL + AD
Sbjct: 505 LSPFQVDLYNLFLRSPVIARLLRG-----IGSQPLKAIGILKKLCNHPDL----LNLPAD 555
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
E + + P GY + + + LS KL VL+ L ++ TDDKIVL+SNYTQTLDL
Sbjct: 556 -LEGSEELYPEGYRPGDRR-NVAVGLSGKLAVLERFLTSMRAKTDDKIVLISNYTQTLDL 613
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FERL + R + + RLDG+M I KR +V+ FN +EFIF+LSSKAGGCGLNLIGANRL
Sbjct: 614 FERLCRSRRWGFFRLDGTMNINKRQNLVDRFNNPEGSEFIFLLSSKAGGCGLNLIGANRL 673
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPC 616
V+FDPDWNPA+D QA+ARVWRDGQKK C
Sbjct: 674 VLFDPDWNPASDQQALARVWRDGQKKSC 701
>gi|334185464|ref|NP_001189933.1| Rad54-like protein [Arabidopsis thaliana]
gi|332642688|gb|AEE76209.1| Rad54-like protein [Arabidopsis thaliana]
Length = 908
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 298/655 (45%), Positives = 404/655 (61%), Gaps = 50/655 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
+ KPFK P GY + RR ARK + +V+ P +L A ++ D
Sbjct: 84 VCRKPFKPPC----SHGYDSTGQLSRRLSARKRFVPWGSSTPVVVALPTKLEASTNIERD 139
Query: 130 KDKIQV-----------------------HVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
+++ V ++V VL LRPHQREGV+FM++CV+G+
Sbjct: 140 EEEEVVCLPPDIEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLH 199
Query: 167 -IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
+ GCI+AD+MGLGKTLQ ITL++TLL QG P++ KAIIV P+SLV NW EI
Sbjct: 200 GSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIK 259
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-V 284
KW+G R+ + + ++ ++ + ++SF + R +L+ISYETFR H+S ++E
Sbjct: 260 KWVGDRIQLIALCESTRDDVLSGIDSFTRP---RSALQVLIISYETFRMHSSKFCQSESC 316
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDE HRLKN ++ T +AL L KRRVLLSGTP+QNDL E+F++V+F N G LG A
Sbjct: 317 DLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDA 376
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
FR YE PI+ G++ A++ E+ A +R +L VN+ ++RRT+ALLS +LP K +
Sbjct: 377 AHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIE 436
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
VVC KMT LQ Y + R + TK+ L+ IT+LKKLCNHP L+ D I
Sbjct: 437 VVCCKMTTLQT-TYNGCLCMQLKRALADNAKQTKV----LAYITALKKLCNHPKLIYDTI 491
Query: 465 QTGAD---GFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMTTDDK 516
++G GFEN + P +G + ++ G +ELS K+ VL +LA ++ TDD+
Sbjct: 492 KSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDR 551
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKA 575
IVLVSNYTQTLDLF +L + R Y ++RLDGS TI KR K+V N T +EF F+LSSKA
Sbjct: 552 IVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKA 611
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLV+FDPDWNPAND QA ARVWRDGQKK +VYRFLSTG+IEEK+ QRQ
Sbjct: 612 GGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQ 671
Query: 636 AHKKALSSCVVDCEEDVARH----FSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
K+ L + + D + S +LR LF + S+ H+K+ CSRC N
Sbjct: 672 MSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSFHGDVRSEIHEKMSCSRCQN 726
>gi|301122241|ref|XP_002908847.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
T30-4]
gi|262099609|gb|EEY57661.1| DNA repair and recombination protein RAD54 [Phytophthora infestans
T30-4]
Length = 1076
Score = 527 bits (1358), Expect = e-147, Method: Compositional matrix adjust.
Identities = 285/605 (47%), Positives = 378/605 (62%), Gaps = 33/605 (5%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
A+ +P A V PP L +L K + VVV ++ LRPHQREGV+FM++C
Sbjct: 140 AVEEPVPATAPVADAPPPL----VLWQSKTDPDIKVVVPEIVGKFLRPHQREGVQFMFDC 195
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V V+ D GCI+AD+MGLGKTLQ ITLM+TLL G KP +++AI+V P+SLVKNW
Sbjct: 196 VCQVKGFDGQGCILADDMGLGKTLQSITLMYTLLLTGMDMKPTVNRAIVVCPTSLVKNWD 255
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGR-RP--VNPILVISYETFRSHASV 278
+EI KWL GRV + + + + +N F++ R RP +L+ISYETFR HA
Sbjct: 256 DEIIKWLHGRVKTVALFEAKRETVIKGINQFIEGSKRPRPGFSAQVLIISYETFRMHAQK 315
Query: 279 LHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
L++CDE HRLKN SQ +AL L ++RVLLSGTP+QNDL E+F++V F
Sbjct: 316 FADTPACCDLLICDEAHRLKNANSQINKALSSLACRKRVLLSGTPMQNDLEEFFAMVDFT 375
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N ILGT EFRK Y PIL G++ ++D ER A L IVN+ ++RR + L +K
Sbjct: 376 NPNILGTPSEFRKNYLGPILIGREPDSTDRERQVAQSCSAMLCEIVNQFILRRGNILNAK 435
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
+LP K QV+C ++ LQ +LY + + S A R MK + LSSIT+LKKLCNH
Sbjct: 436 HLPPKLMQVICCPLSPLQDKLYNHFLSSSACRDMMK-----RSSANVLSSITALKKLCNH 490
Query: 457 PDLVMD---KIQTGADGFENAMNILPTGYAASYKSG-------------KLLIELSAKLM 500
P L+ D K T GF N ++ G E S K++
Sbjct: 491 PLLIFDEMGKTNTKLPGFSNCAQYFTAAKSSKEGGGGDSRHRRGGFGGRTCYPEWSGKML 550
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD ++ ++ TT D+IV+VSNYTQTLD+ L + R +VRLDG+ + KKR K+V+TF
Sbjct: 551 LLDRLMFSMRKTTTDRIVIVSNYTQTLDVVSTLCQERHLPFVRLDGTTSAKKRKKLVDTF 610
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N+ T+N F +LSSKAGGCGLNLIGANRLV+FDPDWNPA D QA ARVWR+GQKK C+VY
Sbjct: 611 NEPTTNSFALLLSSKAGGCGLNLIGANRLVLFDPDWNPATDKQAAARVWREGQKKMCYVY 670
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKI 679
RFL+TG++EEK+ QRQ K+ L + V D EE S +L+ LF ++T+SDTHD++
Sbjct: 671 RFLATGTLEEKIFQRQLSKEGLQNIVDDKEE--VNSLSSKDLKRLFVFRKDTMSDTHDQL 728
Query: 680 KCSRC 684
KC RC
Sbjct: 729 KCDRC 733
>gi|237837635|ref|XP_002368115.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|211965779|gb|EEB00975.1| DNA repair protein RAD54, putative [Toxoplasma gondii ME49]
gi|221509119|gb|EEE34688.1| transcriptional regulator atrx, putative [Toxoplasma gondii VEG]
Length = 873
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/641 (45%), Positives = 398/641 (62%), Gaps = 41/641 (6%)
Query: 70 ILAKPFKVPILNYTGGGYST---KALGVRRE-------GARKALHDPTAP--------NA 111
IL +PFK P+ + G K LGVR + +++ P AP N
Sbjct: 77 ILFRPFKSPLKGHQPGVSEESLRKTLGVRLKRSSAFAVASKQFKSPPPAPTSQALPEANP 136
Query: 112 LVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
LVLY PP H + V VDP+L+ LR HQR+GVKFM++C+ G++
Sbjct: 137 LVLYIPPPDRPH----------EKKVEVDPMLTRWLREHQRQGVKFMFDCLMGLKEFQGE 186
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQG-PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCI+AD+MGLGKTLQ IT++WTLL Q +P + +A++V P+SLV NW EI KWL G
Sbjct: 187 GCILADDMGLGKTLQSITILWTLLEQNIEGTQPAVRRAVVVCPASLVNNWAAEIQKWLQG 246
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R P+ K ++ +K F Y R+ + IL+ SYETFR H L + +V+CD
Sbjct: 247 RCGCTPVADNCKEKVVSKFEGF--KYDRQ--SRILIASYETFRMHVHRLEGVPIDMVVCD 302
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
E HRLKN +++T A++ L AK+R+LLSGTPIQNDL E+F+LV N ++G A FR++
Sbjct: 303 EAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDAHTFRRR 362
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
Y PIL G++ A++ ++ A ERL +L + N ++RRT++LL+K LP K V ++
Sbjct: 363 YANPILVGREPDATEDQQQLAAERLTELSSLTNLFILRRTNSLLAKVLPPKVVLNVFCRL 422
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA--LSSITSLKKLCNHPDLVMDKIQTGA 468
T LQKE Y + + S + R+ K G T LSSI L KLCNHP LV + Q
Sbjct: 423 TPLQKEFYRSFLSSKSCRKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLVKSQAQM-L 481
Query: 469 DGFENAMNILPTGYAASYKSGKLLI--ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
GFE K+ ++ E+S KL++L +L VI+ TT+DKIVL+SNYTQT
Sbjct: 482 QGFEKCEKYFSELDLEGQKARSRMVRTEISGKLLLLARLLDVIRTTTNDKIVLISNYTQT 541
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAGGCGLNLIG 584
LDLF+R+ + GY +RLDG +IKKR ++ FN N F+F+LSSKAGGCG+NLIG
Sbjct: 542 LDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNPHSFVFLLSSKAGGCGVNLIG 601
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLV+FDPDWNPAND QA+ARVWRDGQKK C++YRF STG+IEEK+ QRQ K LS+
Sbjct: 602 ANRLVLFDPDWNPANDKQALARVWRDGQKKSCYIYRFFSTGTIEEKIYQRQICKDGLSAM 661
Query: 645 VV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
+V D E + S ++ LF+L E+T+SDTHD ++C RC
Sbjct: 662 LVSDGENQIKDSLSTELVKDLFRLREDTLSDTHDMLECRRC 702
>gi|221488620|gb|EEE26834.1| DNA repair and recombination protein RAD54, putative [Toxoplasma
gondii GT1]
Length = 872
Score = 527 bits (1357), Expect = e-146, Method: Compositional matrix adjust.
Identities = 293/641 (45%), Positives = 398/641 (62%), Gaps = 41/641 (6%)
Query: 70 ILAKPFKVPILNYTGGGYST---KALGVRRE-------GARKALHDPTAP--------NA 111
IL +PFK P+ + G K LGVR + +++ P AP N
Sbjct: 77 ILFRPFKSPLKGHQPGVSEESLRKTLGVRLKRSSAFAVASKQFKSPPPAPTSQALPEANP 136
Query: 112 LVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
LVLY PP H + V VDP+L+ LR HQR+GVKFM++C+ G++
Sbjct: 137 LVLYIPPPDRPH----------EKKVEVDPMLTRWLREHQRQGVKFMFDCLMGLKEFQGE 186
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQG-PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCI+AD+MGLGKTLQ IT++WTLL Q +P + +A++V P+SLV NW EI KWL G
Sbjct: 187 GCILADDMGLGKTLQSITILWTLLEQNIEGTQPAVRRAVVVCPASLVNNWAAEIQKWLQG 246
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R P+ K ++ +K F Y R+ + IL+ SYETFR H L + +V+CD
Sbjct: 247 RCGCTPVADNCKEKVVSKFEGF--KYDRQ--SRILIASYETFRMHVHRLEGVPIDMVVCD 302
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
E HRLKN +++T A++ L AK+R+LLSGTPIQNDL E+F+LV N ++G A FR++
Sbjct: 303 EAHRLKNDKTKTSLAIIELPAKKRLLLSGTPIQNDLDEFFALVSLCNPNVVGDAHTFRRR 362
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
Y PIL G++ A++ ++ A ERL +L + N ++RRT++LL+K LP K V ++
Sbjct: 363 YANPILVGREPDATEDQQQLAAERLTELSSLTNLFILRRTNSLLAKVLPPKVVLNVFCRL 422
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA--LSSITSLKKLCNHPDLVMDKIQTGA 468
T LQKE Y + + S + R+ K G T LSSI L KLCNHP LV + Q
Sbjct: 423 TPLQKEFYRSFLSSKSCRKMFTAEAEGKGGFTGRVLSSIQGLMKLCNHPSLVKSQAQM-L 481
Query: 469 DGFENAMNILPTGYAASYKSGKLLI--ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
GFE K+ ++ E+S KL++L +L VI+ TT+DKIVL+SNYTQT
Sbjct: 482 QGFEKCEKYFSELDLEGQKARSRMVRTEISGKLLLLARLLDVIRTTTNDKIVLISNYTQT 541
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAGGCGLNLIG 584
LDLF+R+ + GY +RLDG +IKKR ++ FN N F+F+LSSKAGGCG+NLIG
Sbjct: 542 LDLFDRMCRDCGYPVMRLDGQTSIKKRHAMITKFNDPMNPHSFVFLLSSKAGGCGVNLIG 601
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLV+FDPDWNPAND QA+ARVWRDGQKK C++YRF STG+IEEK+ QRQ K LS+
Sbjct: 602 ANRLVLFDPDWNPANDKQALARVWRDGQKKSCYIYRFFSTGTIEEKIYQRQICKDGLSAM 661
Query: 645 VV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
+V D E + S ++ LF+L E+T+SDTHD ++C RC
Sbjct: 662 LVSDGENQIKDSLSTELVKDLFRLREDTLSDTHDMLECRRC 702
>gi|308807292|ref|XP_003080957.1| DNA repair protein RAD54-like (ISS) [Ostreococcus tauri]
gi|116059418|emb|CAL55125.1| DNA repair protein RAD54-like (ISS), partial [Ostreococcus tauri]
Length = 816
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 292/641 (45%), Positives = 389/641 (60%), Gaps = 39/641 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+VVD +L+ LRPHQREGV+FM+ECV G+R D GCI+AD+MGLGKTLQ ITL+WTLL+
Sbjct: 176 IVVDRMLTRWLRPHQREGVQFMFECVMGLRDFDGTGCILADDMGLGKTLQGITLLWTLLK 235
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
QG P + +A+IV P+SLV NW +E KWL GRV LPI ++AE+ + + F+
Sbjct: 236 QGFDGAPAVKRALIVCPTSLVSNWDDECNKWLKGRVKTLPICDSTRAEVVSSIKMFLAP- 294
Query: 257 GRRPVNPILVISYETFRSHASVLH-KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
R V ++++SYETFR H+ + V L++CDE HRLKN E+ T +AL + RRV
Sbjct: 295 --RHVAQVMIVSYETFRIHSERFNFDGAVDLIMCDEAHRLKNGETLTNKALCAVPCLRRV 352
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSGTP+QN L E++++V F N G+LGT EF K+YE PIL G++ A++ E +A
Sbjct: 353 MLSGTPMQNHLDEFYAMVSFCNPGLLGTPSEFSKKYERPILAGREPYATEKELERAQMAN 412
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L +VN+ ++RRT+ +LSK+LP K +VVC K++ LQ+ LY + + S A + + G
Sbjct: 413 TDLSELVNKFILRRTNTILSKHLPPKVVEVVCCKLSPLQQALYEHFLTSKAATQALTGK- 471
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQ-------TGADGFENAMNILPTGYAASYKS 488
L +I +LKKL NHP L+ D I A+GF G S
Sbjct: 472 ----ATAVLPAINALKKLVNHPKLIFDMINGAKNTGSAAANGFNTCAEFFEPGMYGGGTS 527
Query: 489 GKLLI-------ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
+ E S K VL +LA ++ T D+IV++SNYTQTLDL ++ R Y +
Sbjct: 528 RRGGGRMCPGWEEHSGKFAVLARLLANLRSETKDRIVIISNYTQTLDLIAQMCIERHYPF 587
Query: 542 VRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
VRLDG TI KR K+V+ FN TSN F+F+LSSKAGGCG+NLIG NRLV+FDPDWNPAND
Sbjct: 588 VRLDGGTTIGKRQKLVKEFNDPTSNSFVFLLSSKAGGCGINLIGGNRLVLFDPDWNPAND 647
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QA AR WRDGQKK C++YRFL+ G+IEEK+ QRQ K++L + V E S E
Sbjct: 648 KQAAARCWRDGQKKKCYLYRFLAAGTIEEKVFQRQLSKESLQNVVNGSGELEQAVMSTDE 707
Query: 661 LRSLFQLEENTISDTHDKIKCSRCV----NGI------QVKPPPLESDCTDD--LSCWHH 708
LR LF L+ T SDTHD C RC N + + K + D D+ L W H
Sbjct: 708 LRKLFSLDCTTCSDTHDTCGCKRCPKREGNDLMLDEDEEYKFWEEQIDEADEQKLDEWAH 767
Query: 709 VTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKSKVVTEEE 749
+ D ILK G VSFVF S K E + +E+
Sbjct: 768 HHRIDKVPDDILKKSAGDDVSFVF---SLKVEGCAIAEKEQ 805
>gi|9294624|dbj|BAB02963.1| DNA repair protein RAD54-like [Arabidopsis thaliana]
Length = 959
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 293/636 (46%), Positives = 397/636 (62%), Gaps = 48/636 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
+ KPFK P GY + RR ARK + +V+ P +L A ++ D
Sbjct: 84 VCRKPFKPPC----SHGYDSTGQLSRRLSARKRFVPWGSSTPVVVALPTKLEASTNIERD 139
Query: 130 KDKIQV-----------------------HVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
+++ V ++V VL LRPHQREGV+FM++CV+G+
Sbjct: 140 EEEEVVCLPPDIEPLVLWQSEEDGMSNVTTIMVHSVLVKFLRPHQREGVQFMFDCVSGLH 199
Query: 167 -IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
+ GCI+AD+MGLGKTLQ ITL++TLL QG P++ KAIIV P+SLV NW EI
Sbjct: 200 GSANINGCILADDMGLGKTLQSITLLYTLLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIK 259
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-V 284
KW+G R+ + + ++ ++ + ++SF + R +L+ISYETFR H+S ++E
Sbjct: 260 KWVGDRIQLIALCESTRDDVLSGIDSFTRP---RSALQVLIISYETFRMHSSKFCQSESC 316
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDE HRLKN ++ T +AL L KRRVLLSGTP+QNDL E+F++V+F N G LG A
Sbjct: 317 DLLICDEAHRLKNDQTLTNRALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDA 376
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
FR YE PI+ G++ A++ E+ A +R +L VN+ ++RRT+ALLS +LP K +
Sbjct: 377 AHFRHYYEAPIICGREPTATEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIE 436
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
VVC KMT LQ LY + I S ++R + +N K L+ IT+LKKLCNHP L+ D I
Sbjct: 437 VVCCKMTTLQSTLYNHFISSKNLKRAL--ADNAK-QTKVLAYITALKKLCNHPKLIYDTI 493
Query: 465 QTGAD---GFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLAVIKMTTDDK 516
++G GFEN + P +G + ++ G +ELS K+ VL +LA ++ TDD+
Sbjct: 494 KSGNPGTVGFENCLEFFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDR 553
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKA 575
IVLVSNYTQTLDLF +L + R Y ++RLDGS TI KR K+V N T +EF F+LSSKA
Sbjct: 554 IVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSKA 613
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLV+FDPDWNPAND QA ARVWRDGQKK +VYRFLSTG+IEEK+ QRQ
Sbjct: 614 GGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQRQ 673
Query: 636 AHKKALSSCVVDCEEDVARH----FSMSELRSLFQL 667
K+ L + + D + S +LR LF
Sbjct: 674 MSKEGLQKVIQHEQTDNSTRQGNLLSTEDLRDLFSF 709
>gi|348676261|gb|EGZ16079.1| hypothetical protein PHYSODRAFT_560615 [Phytophthora sojae]
Length = 1087
Score = 523 bits (1347), Expect = e-145, Method: Compositional matrix adjust.
Identities = 277/573 (48%), Positives = 366/573 (63%), Gaps = 29/573 (5%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
++ VVV ++ LRPHQREGV+FM++CV VR D GCI+AD+MGLGKTLQ ITLM+T
Sbjct: 171 EIKVVVPEIVGKFLRPHQREGVQFMFDCVCQVRGFDGQGCILADDMGLGKTLQSITLMYT 230
Query: 194 LLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM 253
LL G +P + +AI+V P+SLVKNW +EI KWL GRV + + + + +N F+
Sbjct: 231 LLMTGMDMQPTVKRAIVVCPTSLVKNWDDEIIKWLHGRVKTVALYEAKRETVIKGINQFI 290
Query: 254 QTYGR-RP--VNPILVISYETFRSHASVLHKNE--VGLVLCDEGHRLKNCESQTYQALMG 308
+ R RP +L+ISYETFR HA L++CDE HRLKN SQ +AL
Sbjct: 291 EGSKRPRPGFSAQVLIISYETFRMHAQKFADTPECCELLICDEAHRLKNANSQINKALSS 350
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L ++RVLLSGTP+QNDL E+F++V F N ILGT EFRK Y PIL G++ ++D ER
Sbjct: 351 LACRKRVLLSGTPMQNDLEEFFAMVDFTNPNILGTPSEFRKNYLGPILVGREPDSTDRER 410
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
A L IVN+ ++RR + L +K+LP K QV+C ++ LQ++LY + + S A R
Sbjct: 411 GVAQSCSAMLCEIVNQFILRRGNILNAKHLPPKLMQVICCPLSPLQEQLYMHFLSSSACR 470
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD---KIQTGADGFENAMNILPTGYAAS 485
MK + LSSIT+LKKLCNHP L+ D K T GF N +
Sbjct: 471 DMMK-----RQSANVLSSITALKKLCNHPLLIFDEMGKTNTKLPGFSNCAQYFSAAKESR 525
Query: 486 YKSGK-------------LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
G E S K+++LD ++ ++ TT D+IV+VSNYTQTLD+
Sbjct: 526 DTGGDNGLHRRGGFGGRTCYPEWSGKMLLLDRLMFAMRKTTTDRIVIVSNYTQTLDVVST 585
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L + R +VRLDG+ + KKR K+V+TFN T+N F F+LSSKAGGCGLNLIGANRLV+F
Sbjct: 586 LCQERHLPFVRLDGTTSAKKRKKLVDTFNDPTTNSFAFLLSSKAGGCGLNLIGANRLVLF 645
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNPA D QA ARVWR+GQKK C+VYRFL+TG++EEK+ QRQ K+ L + V D EE
Sbjct: 646 DPDWNPATDKQAAARVWREGQKKMCYVYRFLATGTLEEKIFQRQLSKEGLQNIVDDKEE- 704
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
S +L+ LF ++T+SDTHD++KC RC
Sbjct: 705 -VNSLSSKDLKRLFVFRKDTLSDTHDQLKCDRC 736
>gi|356495839|ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
max]
Length = 894
Score = 523 bits (1346), Expect = e-145, Method: Compositional matrix adjust.
Identities = 274/564 (48%), Positives = 378/564 (67%), Gaps = 19/564 (3%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIE-DAYGCIMADEMGLGKTLQCITLMWTLL 195
+ VDP+L LRPHQREGV+FM++CV+G+ + +GCI+AD+MGLGKTLQ ITL++TLL
Sbjct: 158 ITVDPLLVRYLRPHQREGVQFMFDCVSGLSTTPNIHGCILADDMGLGKTLQSITLLYTLL 217
Query: 196 RQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
QG KP++ KAIIV P+SLV NW EI KW+G RV + + ++ ++ + +++F
Sbjct: 218 SQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGERVPLVALCESTREDVISGIDNFTSP 277
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
V L++SYETFR H+S + L++CDE HRLKN ++ T +AL L KRR
Sbjct: 278 KSNLQV---LIVSYETFRMHSSKFSSTDSCDLLICDEAHRLKNDQTITNRALAALPCKRR 334
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
+LLSGTP+QNDL E+F++V+F N GILG FR+ YE PI+ G++ A+ E+ E+
Sbjct: 335 ILLSGTPLQNDLEEFFAMVNFTNPGILGDIAHFRRYYEAPIICGREPAATAEEKKLGAEQ 394
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+L VNR ++RRT+ALLS +LP K +VVC K+T LQ ++ + + + +K
Sbjct: 395 SAELSVNVNRFILRRTNALLSNHLPPKIVEVVCCKLTPLQNKIIKTELINPCPQSQVKRA 454
Query: 435 ENTKLGMTA-LSSITSLKKLCNHPDLVMDKIQTGA---DGFENAMNILP----TGYAASY 486
+L + L+ IT+LKKLCNHP L+ D I++G+ GFE+ + P +G + S+
Sbjct: 455 ITEELKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPEMLSGRSGSW 514
Query: 487 KSGK-LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
G +ELS K+ VL +LA ++ T+D+IVLVSNYTQTLDLF +L + R Y ++RLD
Sbjct: 515 TGGHGAWVELSGKMHVLARLLAHLRQRTNDRIVLVSNYTQTLDLFAQLCRERRYPHLRLD 574
Query: 546 GSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
GS +I KR K+V FN S +EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA
Sbjct: 575 GSTSISKRQKLVNCFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA 634
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED--VARH--FSMSE 660
ARVWRDGQKK ++YRFLS G+IEEK+ QRQ K+ L + + D VA+ S
Sbjct: 635 ARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQMSKEGLQKVIQQEQTDSLVAQGNLLSTEN 694
Query: 661 LRSLFQLEENTISDTHDKIKCSRC 684
LR LF EN S+ H+ ++CSRC
Sbjct: 695 LRDLFTFHENIKSEIHENMQCSRC 718
>gi|209880656|ref|XP_002141767.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
gi|209557373|gb|EEA07418.1| SNF2 family N-terminal domain-containing protein [Cryptosporidium
muris RN66]
Length = 851
Score = 520 bits (1338), Expect = e-144, Method: Compositional matrix adjust.
Identities = 293/640 (45%), Positives = 389/640 (60%), Gaps = 41/640 (6%)
Query: 118 PQLSAHDLLKI-----DKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
P LS H L+ K+ H + VD +L+ LR HQR GVKFM+EC+ G+R + +
Sbjct: 100 PALSEHALIDRLILWEPKENDGTHKIEVDNILTKWLREHQRSGVKFMFECLMGLRAFEGH 159
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
GCI+AD+MGLGKTLQ IT++WTLL QG KP + KA++V P+SLVKNW EI KWL G+
Sbjct: 160 GCILADDMGLGKTLQSITILWTLLNQGFDGKPAVRKAVVVCPASLVKNWAYEIEKWLLGK 219
Query: 232 VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+ + ++ + F Y R V+ +L+ SYETFR HAS L + L++CDE
Sbjct: 220 CPCTAVAEKDREKVISMFAGF--KYDR--VSRVLIASYETFRMHASNLDGVPIDLIICDE 275
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
HRLKN +++T A+ L AK+R+LLSGTPIQNDL+E++SLV N LG FRK Y
Sbjct: 276 AHRLKNDKTKTSIAINNLPAKKRLLLSGTPIQNDLIEFYSLVSLANPQALGDVSTFRKIY 335
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
PIL G++ A++ ++ A +RL++L I N ++RR + LL+K LP K + ++T
Sbjct: 336 ANPILEGREPDATEYQQDLAAQRLQELSNITNLFILRRANTLLAKVLPPKIILNIFCRLT 395
Query: 412 DLQKELYTNLIKSDAVRRTMKG----GENTKLGMTA--LSSITSLKKLCNHPDLVMDKIQ 465
Q LY ++S A R+ + G + +G+T LSSI SL KLCNHP L+ K
Sbjct: 396 PFQSYLYKKFLRSAACRKMLDTETSCGNSRPIGLTGQVLSSIQSLMKLCNHPSLIKPKSS 455
Query: 466 -TGADGFENAMNILPTGYAASYKSGKL-------------------LIELSAKLMVLDTM 505
+ GFE L + SY SG ++S KL +L +
Sbjct: 456 GSYGRGFEGCEKYLEQAQSKSYTSGGFGSGVLSRRKVGNNRSAYESRPDISGKLYLLSRL 515
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
L I+ +TDD++VLVSNYTQTLD+FERL + VRLDGS +I KR +V+ FN S
Sbjct: 516 LFQIRRSTDDRVVLVSNYTQTLDVFERLCRDLQVPCVRLDGSTSITKRHSMVKIFNDPNS 575
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
N F F+LSSKAGGCG+NLIGANRLVMFDPDWNPAND QA+ARVWRDGQKK C++YRF ST
Sbjct: 576 NSFAFLLSSKAGGCGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNCYIYRFFST 635
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEED--VARHFSMSELRSLFQLEENTISDTHDKIKCS 682
G+IEEK+ QRQ K LS+ +V D + S +R LF L E TISDTH+ I+CS
Sbjct: 636 GTIEEKIYQRQLCKDGLSAMLVTTSGDNQLKDAISADLVRDLFVLREETISDTHEMIQCS 695
Query: 683 RCVNGIQVK--PPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
RC Q P LE D+L+ W H + + D +L
Sbjct: 696 RCYTNGQTNYMIPQLEELEEDNLNTWAHYHDVLQVPDEVL 735
>gi|412993466|emb|CCO13977.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
Length = 1135
Score = 516 bits (1330), Expect = e-143, Method: Compositional matrix adjust.
Identities = 296/651 (45%), Positives = 384/651 (58%), Gaps = 64/651 (9%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V VD +L+ LRPHQREGV F+YECV G+R + GCI+AD+MGLGKTLQ I LMWTLL
Sbjct: 165 VKVDNMLTRWLRPHQREGVSFLYECVMGLRGFEGAGCILADDMGLGKTLQAIALMWTLLN 224
Query: 197 QG--PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQ 254
KP + K +IV P+SLV NW E KWL G+V PI G S+A+ ++ + F+
Sbjct: 225 TSIEEDQKPTVKKVVIVCPTSLVANWDAECIKWLKGKVKTTPICGDSRADAESAVKMFLA 284
Query: 255 TYGRRPVNPILVISYETFR-SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
R + +L++SYETFR H ++ LV+CDE HRLKN E+ T QAL + KR
Sbjct: 285 PQSR---SQVLIVSYETFRIYHERFTTESSCQLVICDEAHRLKNGETLTNQALAKMACKR 341
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R++LSGTP+QN L E++S+V F N GILGT +EF K+YE PIL G++ A+DAE KANE
Sbjct: 342 RIMLSGTPMQNHLDEFYSMVSFCNPGILGTTKEFAKKYERPILAGREPYATDAELAKANE 401
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
R E L IVN+ ++RRT+ +LSK+LP K ++VC K T LQ+ +Y +L+ S+ R K
Sbjct: 402 RNEMLSVIVNKFILRRTNTILSKHLPPKVIEIVCCKTTPLQRSIYEHLL-SEKARIAQKT 460
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQ----TGADGFENAMNILPTGYAASYKSG 489
G+ M L+ IT+LKKLCNHP L+ D I+ G NA++ T Y G
Sbjct: 461 GKQ----MDVLACITALKKLCNHPKLIFDAIREKKYAGKTDGGNAIDDNLTPYFHGLYDG 516
Query: 490 KLLIEL--------------SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
K VL +L ++ T D+IV++SNYTQTLDL E L +
Sbjct: 517 GGSGRGGRAGGQMCEGWEWHGGKFAVLARLLHQLRTETSDRIVIISNYTQTLDLVEILCR 576
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
Y +RLDG +I KR K+V FN T+NEFIF+LSSKAGGCG+NL+G NRLV+FDPD
Sbjct: 577 QNNYPSLRLDGGTSINKRQKLVNAFNDLTNNEFIFLLSSKAGGCGINLVGGNRLVLFDPD 636
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNPAND QA AR WRDGQKK C+ YRFLS+G+IEEK+ QRQ K+AL+S VVD
Sbjct: 637 WNPANDKQAAARCWRDGQKKKCYEYRFLSSGTIEEKVFQRQLAKQALTS-VVDGRGSGLE 695
Query: 655 HFSMS--ELRSLFQLEENTISDTHDKIKCSRC---------------------------V 685
SM+ +L+ LF L+ SDTH C+RC +
Sbjct: 696 QMSMTTEDLQQLFSLDVECPSDTHRTCDCTRCPDVHRKIEENTTTTMMNHSSISSEDNAI 755
Query: 686 NGIQVKPPPLESDCTD----DLSCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
G P P E D L+ W H + D L+ G V+FVF
Sbjct: 756 GGGVNDPLPEEKQLEDFDEAKLNTWAHHYRMSHVPDAQLRKAAGEDVTFVF 806
>gi|302780671|ref|XP_002972110.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
gi|300160409|gb|EFJ27027.1| hypothetical protein SELMODRAFT_412612 [Selaginella moellendorffii]
Length = 1011
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 312/723 (43%), Positives = 403/723 (55%), Gaps = 119/723 (16%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHD-------PTAPNALVL-------- 114
++ +PFK P GG S +RR ARK P +PN L
Sbjct: 60 VIRRPFKSP----CPGGQSNSDELLRRLSARKRFVPWKRQPLLPLSPNVETLPIQEDPSE 115
Query: 115 ---YTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR----I 167
P L + D ++ +VVDP+++ LRPHQREGV+FM+ECVTG+R
Sbjct: 116 GSVELPDDFEPLVLWQPDGNEDGATIVVDPIVAKFLRPHQREGVQFMFECVTGLREFSKA 175
Query: 168 EDAY--GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
DA GCI+AD+MGLGKTLQ ITL+WTLLRQG P+ + IIV P+SL
Sbjct: 176 GDAAWSGCILADDMGLGKTLQSITLLWTLLRQGFQGSPIAKRIIIVTPTSL--------- 226
Query: 226 KWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-NEV 284
IL+ISYETFR HA K
Sbjct: 227 --------------------------------------ILIISYETFRLHAGKFQKEGAC 248
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDE HRLKN + T QAL L+ RRVLLSGTP+QNDL E++++V+F N GILG
Sbjct: 249 DLLICDEAHRLKNDHTLTNQALASLQCHRRVLLSGTPMQNDLEEFYAMVNFTNPGILGEV 308
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
FR+ Y+ PILRG++ A++ R ER +L VN+ ++RRT+ALLS +LP K +
Sbjct: 309 AAFRRYYQNPILRGREPEATEDARKLGLERSAELSEKVNQFILRRTNALLSNHLPPKIVE 368
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
VVC K+T+LQ+ELYT+ I S VR + ++ L+SIT+LKKLC+HP L+ D +
Sbjct: 369 VVCCKLTNLQRELYTHFIHSKNVRLAL---QDKAKRARVLASITALKKLCSHPKLIYDTV 425
Query: 465 QTG---ADGFENAMNILP----TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ G A GFEN M P TG S ++LS K+ VL +L ++ T+D+I
Sbjct: 426 RAGGSEAAGFENCMQFFPKEMQTGRGTP--SDGSWVKLSGKMFVLARLLENLRKKTNDRI 483
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAG 576
VLVSNYTQTLDLF +L + R Y YVRLDGS +I KR K+V+ FN S NEF F+LSSKAG
Sbjct: 484 VLVSNYTQTLDLFAQLCRERNYPYVRLDGSTSIGKRQKLVQKFNDPSQNEFAFLLSSKAG 543
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK ++YRFL+TG+IEEK+ QRQ
Sbjct: 544 GCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLATGTIEEKVYQRQM 603
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
K+ L + + S +LR LF L + + SDTHD + C RC ++ P L
Sbjct: 604 SKEGLQKVISGDSKAEVNALSTEDLRDLFTLRDIS-SDTHDTLDCERC--DVENVPNELA 660
Query: 697 SDCTD---------------------------DLSCWHHVTEKRWLVDPILKHCWGAGVS 729
+ D DL W H + + D IL+ G VS
Sbjct: 661 NQLGDIGAFAKTAGCLERQRHWEKQIGEPAEEDLIRWAHHSHPSTVPDVILQWAAGEEVS 720
Query: 730 FVF 732
FVF
Sbjct: 721 FVF 723
>gi|84998504|ref|XP_953973.1| recombinational repair (RAD54 ) protein [Theileria annulata]
gi|65304971|emb|CAI73296.1| recombinational repair (RAD54 homologue) protein [Theileria
annulata]
Length = 806
Score = 514 bits (1323), Expect = e-143, Method: Compositional matrix adjust.
Identities = 292/683 (42%), Positives = 407/683 (59%), Gaps = 63/683 (9%)
Query: 70 ILAKPFKVPILNYTGG---GYSTKALGVRREGARKA----------------LHDPTAPN 110
I+ KPFK P+ + G K LG R + K+ L D N
Sbjct: 51 IILKPFKSPLEGHQPGVSEESQRKTLGCRIKSDTKSFLKDFRTGIYLEKPESLEDLPPDN 110
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
LVLYT +D++QV + VD +LS LR HQR+GV+F+++C+ G++ +
Sbjct: 111 PLVLYTSDP----------EDEVQVEIKVDSILSRFLRDHQRQGVQFIFDCLMGLKGFNG 160
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP----------LIDKAIIVAPSSLVKNW 220
GCI+AD+MGLGKTLQ IT+MWTLL QG KP K I+ P+SLV NW
Sbjct: 161 RGCILADDMGLGKTLQSITVMWTLLNQGLDNKPGKTHNYTSSTAARKCAIICPASLVNNW 220
Query: 221 CNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
+EI KWL G+ + SK ++ + F Y R + +++ SYET+R H S L
Sbjct: 221 ESEIKKWLRGKCPCTAVAESSKEKVISSFQGF--KYDR--TSKVIISSYETYRLHCSYLE 276
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
+ L++CDE HRLKN +++T Q++ A+ R++LSGTPIQNDL E++SLV N +
Sbjct: 277 GVNIDLLICDEAHRLKNDKTRTSQSISTSSAQMRLMLSGTPIQNDLNEFYSLVSLCNPDV 336
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG FR+ + PIL G++ A+ AE+ KA+ERL +L I N+ ++RRT+ALL+K LP
Sbjct: 337 LGDVNNFRRNFANPILIGREPYATPAEQQKASERLAELSNITNQFVLRRTNALLAKVLPP 396
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K V +TD+QK++Y + + S + M ++ ALS+I SL KLCNHP L+
Sbjct: 397 KIILNVFCNLTDVQKDIYKSFVNSKRWKNIMN---QDRVESRALSAIQSLMKLCNHPYLI 453
Query: 461 -MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ + D ++I ++ YK + +LS K +VL +L I+ ++D++V+
Sbjct: 454 KRGGLMSSPDVDSLLLDIENATKSSKYKCCR--CDLSGKFLVLFRLLYQIRKNSNDRVVI 511
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGC 578
+SNYTQTLDLFERL K Y + RLDG +IKKR K+V TFN SN F+F+LSSKAGGC
Sbjct: 512 ISNYTQTLDLFERLCKECSYPFERLDGGTSIKKRHKLVTTFNDPNSNSFVFLLSSKAGGC 571
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGANRLV+FDPDWNPAND QA+ARVWRDGQ K C++YRF STG+IEEK+ QRQ K
Sbjct: 572 GINLIGANRLVLFDPDWNPANDKQALARVWRDGQTKVCYIYRFFSTGTIEEKIYQRQICK 631
Query: 639 KALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN----------- 686
LSS +V D ++ S L++LF+ +E +SDTHD I+C RC +
Sbjct: 632 DGLSSMLVTDGINELKDSLSGEYLKNLFEYKEEVLSDTHDLIECKRCSHEDGMFLKQKDM 691
Query: 687 -GIQVKPPPLESDCTDDLSCWHH 708
G + P L+ DDL+ W H
Sbjct: 692 LGTVMHVPQLKEFLEDDLNTWAH 714
>gi|66361996|ref|XP_627962.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
gi|46227534|gb|EAK88469.1| RAD54 like SWI/SNF2 ATpase [Cryptosporidium parvum Iowa II]
Length = 877
Score = 513 bits (1321), Expect = e-142, Method: Compositional matrix adjust.
Identities = 292/638 (45%), Positives = 392/638 (61%), Gaps = 40/638 (6%)
Query: 118 PQLSAHDL-LKIDKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIM 175
PQ++ + L L I + + V+ VD +L+ LR HQR+GV F++EC+ G+R D GCI+
Sbjct: 106 PQVNVNPLILWISSEDGEKRVIEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDGNGCIL 165
Query: 176 ADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAAL 235
AD+MGLGKTLQ IT++WTLL QG KP + KA++V P+SLVKNW +EI KWL G+
Sbjct: 166 ADDMGLGKTLQSITILWTLLNQGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKCT 225
Query: 236 PIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
P+ AE D K+ S + ++ IL+ SYETFR H L + LV+CDE HR
Sbjct: 226 PV-----AERDREKVVSAFAGFKYDTMSRILIASYETFRMHVEQLDGVPIDLVICDEAHR 280
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN +++T A+ L AK+R+LLSGTPIQNDL+E++SLV N +LG +F+K Y P
Sbjct: 281 LKNDKTKTAMAINNLPAKKRLLLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANP 340
Query: 355 ILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQ 414
IL G++ AS+ ++ A +RL++L I N ++RR + LL+K LP K + +T +Q
Sbjct: 341 ILEGREPDASEYQQELATQRLQELSNITNHFILRRANTLLAKVLPPKIILNIFCNLTPIQ 400
Query: 415 KELYTNLIKSDAVRRTMKG---GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG-ADG 470
LY ++S A ++ + G T L LSSI SL KLCNHP L+ K G G
Sbjct: 401 NYLYRRFLRSSACKKLLDSDSTGNPTGLTGQVLSSIQSLMKLCNHPTLIRPKTSGGYGKG 460
Query: 471 FENAMNILPT--GYAASYKSG-----KLLI----------------ELSAKLMVLDTMLA 507
FE + L G + S +SG ++ I LS KL +L +L
Sbjct: 461 FEGSEKYLEMIHGRSVSGESGGEYKKRVTIGSSIRNSNRTGFSSKPNLSGKLYLLSRLLF 520
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNE 566
I+ T D++VLVSNYTQTLD+FE L + VRLDGS +I +R +V+TFN SN
Sbjct: 521 HIRSNTKDRVVLVSNYTQTLDVFECLCRDLQVPCVRLDGSTSITRRHNLVKTFNDPNSNS 580
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F F+LSSKAGGCG+NLIGANRLVMFDPDWNPAND QA+ARVWRDGQKK C++YR STG+
Sbjct: 581 FAFLLSSKAGGCGINLIGANRLVMFDPDWNPANDKQALARVWRDGQKKNCYIYRLFSTGT 640
Query: 627 IEEKMMQRQAHKKALSSCVVDC--EEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
IEEK+ QRQ K LS+ +V ++ S +R LF L+E+TISDTHD I+C+RC
Sbjct: 641 IEEKIYQRQLCKDGLSAMLVTSGGNNELKDSISADLVRDLFTLKEDTISDTHDMIQCNRC 700
Query: 685 --VNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
NG + P + DDL+ W H + D IL
Sbjct: 701 HDSNGQPLDMVPQTTGLEDDLNTWGHYHSFSEIPDEIL 738
>gi|401408081|ref|XP_003883489.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
gi|325117906|emb|CBZ53457.1| hypothetical protein NCLIV_032440 [Neospora caninum Liverpool]
Length = 713
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 290/640 (45%), Positives = 392/640 (61%), Gaps = 40/640 (6%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG-PL 200
+L+ LR HQR+GVKFM++C+ G++ GCI+AD+MGLGKTLQ IT++WTLL Q
Sbjct: 1 MLTRWLREHQRQGVKFMFDCLMGLKDFQGEGCILADDMGLGKTLQSITILWTLLEQNIEG 60
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
+P + +A++V P+SLV NW EI KWL GR P+ K ++ +K F Y R+
Sbjct: 61 TQPAVRRAVVVCPASLVNNWAAEIQKWLQGRCGCTPVADNCKDKVVSKFEGF--KYDRQ- 117
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+ IL+ SYETFR H L + +V+CDE HRLKN +++T A++ L AK+R+LLSGT
Sbjct: 118 -SRILIASYETFRVHVHRLEGVPIDMVVCDEAHRLKNDKTKTSLAIIELPAKKRLLLSGT 176
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
PIQNDL E+F+LV N ++G A FRK+Y PIL G++ A++ ++ A RL +L
Sbjct: 177 PIQNDLDEFFALVSLCNPNVVGDAHTFRKRYANPILIGREPDATEDQQQLAAARLTELSS 236
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
+ N ++RRT++LL+K LP K V ++T LQKE Y + + S + R+ K G
Sbjct: 237 LTNMFILRRTNSLLAKVLPPKVVLNVFCRLTPLQKEFYRSFLSSKSCRKIFAAEAEGKSG 296
Query: 441 MTA--LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI--ELS 496
T LSSI L KLCNHP LV + Q GFE K+ L+ E+S
Sbjct: 297 FTGRVLSSIQGLMKLCNHPSLVKSQAQM-LQGFEKCEKYFSELDLEGQKARSRLVRPEIS 355
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
KL++L +L VI+ TT+DKIVL+SNYTQTLDLF+R+ + GY +RLDG +IKKR +
Sbjct: 356 GKLLLLARLLDVIRTTTNDKIVLISNYTQTLDLFDRMCRDCGYPVMRLDGQTSIKKRHAM 415
Query: 557 VETFNKTSN--EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
+ FN N F+F+LSSKAGGCG+NLIGANRLV+FDPDWNPAND QA+ARVWRDGQKK
Sbjct: 416 ITKFNDPMNPQSFVFLLSSKAGGCGVNLIGANRLVLFDPDWNPANDKQALARVWRDGQKK 475
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENTIS 673
PC++YRF STG+IEEK+ QRQ K LS+ +V D E + S ++ LF+L E+T+S
Sbjct: 476 PCYIYRFFSTGTIEEKIYQRQICKDGLSAMLVSDGENQIKDSLSTELVKDLFRLREDTVS 535
Query: 674 DTHDKIKCSRC------------VNG-----------IQVKPPPLESDCT-DDLSCWHHV 709
DTHD + C RC NG I+ P LE D DDL W H
Sbjct: 536 DTHDMLDCERCGFASRRDVENEGENGRREASTETEHEIRNFVPQLEEDFDEDDLLTWAHH 595
Query: 710 TEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKSKVVTEEE 749
++ L DP L+ A + V S E + V+ E+
Sbjct: 596 SDLASLPDPCLRQ---AAFACVDAHGSGTNEDEETVSVEQ 632
>gi|225560868|gb|EEH09149.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
G186AR]
Length = 1511
Score = 513 bits (1320), Expect = e-142, Method: Compositional matrix adjust.
Identities = 303/704 (43%), Positives = 392/704 (55%), Gaps = 141/704 (20%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
Q+ + F VP++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 97 QVFKQRFSVPLINKNSGAYNPNRPAPILGMRSGTTFVVKPLHDPSGEFAIVLYDPTIDDK 156
Query: 118 ----------------------PQLSA-------HDLLKIDKD---KIQVHVVVDPVLSN 145
P+L A D+L I K + ++ VV+DP L+
Sbjct: 157 PVNPNDANDGNGKGEEREKTDPPKLDAPLVHKSLADILGIKKKVDGRPKIPVVIDPKLAK 216
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPL 204
+LRPHQ EGVK LQCITL+WTLL+Q P A K
Sbjct: 217 VLRPHQVEGVK----------------------------LQCITLLWTLLKQSPEAGKTT 248
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVN 262
I K II PS+LVKNW NE KWLG G V +DG SK E+ ++L + + GR V
Sbjct: 249 IQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKVELTSQLRQWAVSSGRSIVR 308
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
P+L++SYET R + L +GL+LCDEGHRLKN +SQT+ AL L RRV+LSGTPI
Sbjct: 309 PVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLKNGDSQTFTALNSLNVDRRVILSGTPI 368
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QNDL EYFSL++F N ILGT EF K+YE PILRG+D+ SD +R K +E + +L+ +V
Sbjct: 369 QNDLSEYFSLLNFANPNILGTRNEFHKKYEMPILRGRDADGSDEDRKKGDECVTELLNVV 428
Query: 383 NRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT 442
N+ + +RRT
Sbjct: 429 NKFI----------------------------------------IRRT------------ 436
Query: 443 ALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK---LLIELSAKL 499
+ I S + +V + GAD + ILP Y G+ + S K+
Sbjct: 437 --NDILSKYLPVKYEHVVFYLLNLGAD-LPGSEQILPDDYVPLESRGRDRDVRSWYSGKM 493
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y +RLDG+M + KR K+V+
Sbjct: 494 MVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYGCLRLDGTMNVTKRQKLVDK 553
Query: 560 FNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
FN EF+F+LSSKAGGCG+NLIGANRLV+FDPDWNPA D QA+ARVWRDGQKK CFV
Sbjct: 554 FNDPNGEEFVFLLSSKAGGCGINLIGANRLVLFDPDWNPAADQQALARVWRDGQKKDCFV 613
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDK 678
YRF++TG+IEEK+ QRQ+HK++LSSCVVD EDV RHFS+ LR LFQ + T SDTHD
Sbjct: 614 YRFIATGTIEEKIFQRQSHKQSLSSCVVDSAEDVERHFSLDSLRELFQFKPETRSDTHDT 673
Query: 679 IKCSRC-VNGIQ-VKPPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
KC RC +G Q +K P + + ++ L W++ P++
Sbjct: 674 FKCKRCRPDGTQHIKAPAMLPNGSNVLEGLD------WVIRPLV 711
>gi|67624313|ref|XP_668439.1| DNA repair protein RAD54-like [Cryptosporidium hominis TU502]
gi|54659648|gb|EAL38216.1| DNA repair protein RAD54-like [Cryptosporidium hominis]
Length = 877
Score = 511 bits (1315), Expect = e-142, Method: Compositional matrix adjust.
Identities = 285/617 (46%), Positives = 382/617 (61%), Gaps = 38/617 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ VD +L+ LR HQR+GV F++EC+ G+R D GCI+AD+MGLGKTLQ IT++WTLL
Sbjct: 127 IEVDSMLTKWLREHQRQGVTFIFECLMGLRDFDGNGCILADDMGLGKTLQSITILWTLLN 186
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEID-NKLNSFMQT 255
QG KP + KA++V P+SLVKNW +EI KWL G+ P+ AE D K+ S
Sbjct: 187 QGFDGKPSVRKAVVVCPASLVKNWASEIEKWLQGKCKCTPV-----AERDREKVVSAFAG 241
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+ ++ IL+ SYETFR H L + LV+CDE HRLKN +++T A+ L AK+R+
Sbjct: 242 FKYDTMSRILIASYETFRMHVEQLDGVPIDLVICDEAHRLKNDKTKTAMAINNLPAKKRL 301
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
LLSGTPIQNDL+E++SLV N +LG +F+K Y PIL G++ AS+ ++ A +RL
Sbjct: 302 LLSGTPIQNDLVEFYSLVSLANPQVLGDVSQFKKIYANPILEGREPDASEYQQELATQRL 361
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-- 433
++L I N ++RR + LL+K LP K + +T +Q LY ++S A ++ +
Sbjct: 362 QELSNITNHFILRRANTLLAKVLPPKIILNIFCNLTPIQNYLYRRFLRSSACKKLLDSDS 421
Query: 434 -GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG-ADGFENAMNILPT--GYAASYKSG 489
G T L LSSI SL KLCNHP L+ K G GFE + L G +AS +SG
Sbjct: 422 TGNPTGLTGQVLSSIQSLMKLCNHPTLIRPKTSGGYGKGFEGSEKYLEMIHGRSASGESG 481
Query: 490 -----KLLI----------------ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
++ + LS KL +L +L I+ T D++VLVSNYTQTLD
Sbjct: 482 GEYKKRVTVGSSIRNSNRTGFSSKPNLSGKLYLLSRLLFHIRSNTKDRVVLVSNYTQTLD 541
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANR 587
+FE L + VRLDGS +I +R +V+TFN SN F F+LSSKAGGCG+NLIGANR
Sbjct: 542 VFECLCRDLQVPCVRLDGSTSITRRHNLVKTFNDPNSNSFAFLLSSKAGGCGINLIGANR 601
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LVMFDPDWNPAND QA+ARVWRDGQKK C++YR STG+IEEK+ QRQ K LS+ +V
Sbjct: 602 LVMFDPDWNPANDKQALARVWRDGQKKNCYIYRLFSTGTIEEKIYQRQLCKDGLSAMLVT 661
Query: 648 C--EEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC--VNGIQVKPPPLESDCTDDL 703
++ S +R LF L+E+TISDTHD I+C+RC +G + P + DDL
Sbjct: 662 SGGNNELKDSISADLVRDLFTLKEDTISDTHDMIQCNRCHDSSGQPLDMVPQTTGLEDDL 721
Query: 704 SCWHHVTEKRWLVDPIL 720
+ W H + D IL
Sbjct: 722 NTWGHYHSFSEIPDEIL 738
>gi|159489044|ref|XP_001702507.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280529|gb|EDP06286.1| predicted protein [Chlamydomonas reinhardtii]
Length = 533
Score = 509 bits (1311), Expect = e-141, Method: Compositional matrix adjust.
Identities = 272/543 (50%), Positives = 360/543 (66%), Gaps = 17/543 (3%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYG--CIMADEMGLGKTLQCITLMWTLLRQGP 199
+L+ LRPHQREGV+FM++CVTG R+E +G CI+AD+MGLGKTLQ ITL+WTLL G
Sbjct: 1 MLTRFLRPHQREGVQFMFDCVTGQRLEGKHGAGCILADDMGLGKTLQGITLLWTLLGGGH 60
Query: 200 LAK---PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
PL +AIIV P+SLV NW NE +KWL GR+ L + S+ ++ + + F+ +
Sbjct: 61 PLLGGVPLARRAIIVCPTSLVSNWDNECSKWLKGRLTTLAMCESSREDVCSSIALFLDS- 119
Query: 257 GRRPVNPILVISYETFRSHASVLH-KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
++ +L+ISYETFR HA + L++CDE HRLKN + T +AL + KRRV
Sbjct: 120 SNTGLHRVLIISYETFRMHADKFQVPHACDLLMCDEAHRLKNDATLTNRALDNMPCKRRV 179
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
LLSGTP+QN L E+F++V F N G+LG+A EFR++YE PIL G++ A+ + ER
Sbjct: 180 LLSGTPMQNHLDEFFAMVDFCNPGVLGSAAEFRRRYEAPILAGREPDATPEQVALGEERS 239
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
+L G+ NR ++RRT+ LLS++LP K +VVC ++T+LQ+ LY + ++S A RR + G+
Sbjct: 240 AELSGLTNRFILRRTNKLLSQHLPPKVIEVVCCRLTELQRALYIHFLQSKAARRVLNAGK 299
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
T LS+ITSLKKLCNHP L+ D A G + G ++ G +
Sbjct: 300 TTS---GVLSAITSLKKLCNHPKLIYDAAAAAAAGEDG------EGKIEGFEVGPAEGAV 350
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
K+ VL ML V+ T D+IVLVSNYT TLDLF L + RGY +VRLDG+ TI KR K
Sbjct: 351 GGKMAVLARMLHVLYTETTDRIVLVSNYTSTLDLFVALCRERGYPFVRLDGTTTINKRQK 410
Query: 556 VVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
+V+ FN +F F+LSSKAGGCGLNLIGANRLV+FDPDWNPAND QA ARVWRDGQ+K
Sbjct: 411 LVKVFNDPVEKQFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDAQAAARVWRDGQRK 470
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
FVYRFLSTGSIEEK+ QRQ K+ L V + A + +LR LF L ++ SD
Sbjct: 471 RVFVYRFLSTGSIEEKVFQRQMSKEGLKQLVGKTGKAAANVMTSEDLRELFSLNADSPSD 530
Query: 675 THD 677
T++
Sbjct: 531 TYE 533
>gi|403221169|dbj|BAM39302.1| recombinational repair protein [Theileria orientalis strain
Shintoku]
Length = 788
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 291/684 (42%), Positives = 400/684 (58%), Gaps = 64/684 (9%)
Query: 70 ILAKPFKVPILNYTGGGYST----KALGVR----------------REGARKALHDPTAP 109
I KPFK P+ +T G S K LG R E R+ + D
Sbjct: 29 IWLKPFKSPLEGHTPVGISEESQRKTLGCRIRTDTKSFLKDFRTGTYEEKREVIEDLPPD 88
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
N LVLYT +D +QV + VD +LS LR HQR+GV+F+++C+ G++ +
Sbjct: 89 NPLVLYTSAP----------EDPVQVTIKVDSILSRFLRDHQRQGVQFIFDCLMGLKDFE 138
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP----------LIDKAIIVAPSSLVKN 219
GCI+AD+MGLGKTLQ IT+MWTLL QG KP K I+ P+SLV N
Sbjct: 139 GRGCILADDMGLGKTLQSITVMWTLLNQGLDNKPGKKEKRNWSVAARKCAIICPASLVNN 198
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
W +EI KWL G+ I S+ + + F R +++ SYET+R H L
Sbjct: 199 WESEIKKWLRGKCPCTAIADSSRERVISSFEGFKYDRNSR----VIISSYETYRMHCGYL 254
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ L++CDE HRLKN +++T Q++ AK R++LSGTPIQNDL E++SL+ N
Sbjct: 255 EGVNIDLLICDEAHRLKNDKTRTSQSISASSAKMRLMLSGTPIQNDLNEFYSLISLCNPD 314
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG FRK + PIL G++ A+ AE+ KA+ERL +L I N+ ++RRT+ALL+K LP
Sbjct: 315 VLGDVNNFRKNFANPILIGREPDATPAEQQKASERLLELSNITNQFVLRRTNALLAKVLP 374
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K V K++D+QK+LY + I S + + K G+TA I SL KLCNHP L
Sbjct: 375 PKIIMNVFCKLSDVQKKLYRSFITSKKCKNMINQETVPKSGLTA---IQSLMKLCNHPYL 431
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ + ++ + + YK+ + +LS K ++L +L I+ +++D++V+
Sbjct: 432 LKKGGVLSSPDVDSLLTAIEDNSKNKYKNCR--SDLSGKFLLLFRLLYHIRRSSNDRVVI 489
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGC 578
+SNYTQTLDLFERL K Y + RLDG+ +IKKR K+V +FN SN FIF+LSSKAGGC
Sbjct: 490 ISNYTQTLDLFERLCKECKYPFERLDGATSIKKRHKLVTSFNDPNSNSFIFLLSSKAGGC 549
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM------ 632
G+NLIGANRLV+FDPDWNPAND QA+ARVWRDGQ K C++YRF S+G+IEEK+
Sbjct: 550 GINLIGANRLVLFDPDWNPANDKQALARVWRDGQNKVCYIYRFFSSGTIEEKIYQVSSQC 609
Query: 633 -----QRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
QRQ K LSS +V D ++ S L+++F +E ISDTHD I+C RC
Sbjct: 610 RLRWTQRQICKDGLSSMLVTDGTNELKDSLSGELLKNIFDYKEEVISDTHDLIECKRCYT 669
Query: 687 --GIQVKPPPLESDCTDDLSCWHH 708
G P L+ DDL+ W H
Sbjct: 670 EEGQLPHVPQLKEFLEDDLNTWAH 693
>gi|328874980|gb|EGG23345.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 937
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 289/714 (40%), Positives = 422/714 (59%), Gaps = 56/714 (7%)
Query: 38 KPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVP-ILNYTGGGYSTKALGVRR 96
K L SVD ED N + + + + + + + + +++P GG+S G
Sbjct: 190 KILTSVDEEDYKNGSIFLKPDLIIQRKRDEAREKKETYRLPGTWRPKAGGWSVPLAGGAE 249
Query: 97 EGAR--KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREG 154
R K LH+P +PNALVLY P + + + + VVVDP+LS LRPHQR+G
Sbjct: 250 RAKRLVKPLHNPHSPNALVLYQPRDMLSEN---------NIPVVVDPILSAKLRPHQRQG 300
Query: 155 VKFMYECVTGVRI-EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAP 213
V+FM++C+ G R GCI+AD+MGLGK++Q I ++WTLL+QGP P ++A+IVAP
Sbjct: 301 VQFMFDCLLGFRGGYKGNGCILADDMGLGKSIQAIAILWTLLKQGPNGLPTAERAVIVAP 360
Query: 214 SSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV-------NPILV 266
SSLV NWC E+ KWLG + + I G +K YGR + +LV
Sbjct: 361 SSLVGNWCKELKKWLGEGIKPVAIGGSTK-------------YGRARLAELELGTKDVLV 407
Query: 267 ISYETFRSH-ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
ISY+ R + ++ + +GLV+CDEGHRLKN E +T +A+ + RRV+LSGTPIQND
Sbjct: 408 ISYDQLRIYCEEIIKISSIGLVICDEGHRLKNPEIKTTKAVSMIPTPRRVILSGTPIQND 467
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E+F++V+FVN G+L F+ Y+ PIL ++ ASD ++ ER +L + +
Sbjct: 468 LNEFFAMVNFVNPGVLKNMSTFQNVYDAPILASRNPDASDEDKRLGRERSAELTRLTQQF 527
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
++RRT+A+ +YLP K E V IK++ LQ ++Y +L+ D ++ G + AL
Sbjct: 528 ILRRTAAVNVQYLPKKIEYTVFIKLSPLQHKIYKHLV--DTIKNQQFGNFSG-----ALP 580
Query: 446 SITSLKKLCNHPDLVM-----DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
IT+LKKL N P+L+ D Q ++ + + P + + S KL
Sbjct: 581 LITTLKKLTNCPELIYLPDKEDPTQVN----DSVLKLFPKEWNPKV----FQPQYSGKLQ 632
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+D +LA I+ T+ D++V++SNYTQTL + + + RGY++ +LDGS ++ R K+V+ F
Sbjct: 633 FVDKLLAGIRKTSKDRVVIISNYTQTLTVLAGMMRTRGYEFFQLDGSTSVDNRQKMVDLF 692
Query: 561 NKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N S NEF+F+LSSKAGG GLNLIGAN LV++DPDWNPAND QAMARVWR+GQKK +Y
Sbjct: 693 NDPSRNEFVFLLSSKAGGVGLNLIGANHLVLYDPDWNPANDLQAMARVWREGQKKVVSIY 752
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKI 679
R LSTG+IEEK+ QRQ K ALS+ VV+ + D A F +L+ +F L E+TI DTHD +
Sbjct: 753 RTLSTGTIEEKIFQRQITKMALSTSVVEGDSDNAPAFETKDLKDIFNLREDTICDTHDML 812
Query: 680 KCSRC-VNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
+C ++ +S +L+ + H + L D L+ VSF+F
Sbjct: 813 GTCKCGAPTTRIPKHKRDSMSIGELASYDHYYDMSKLKDKNLQEASRDIVSFMF 866
>gi|325190695|emb|CCA25191.1| DNA repair and recombination protein RAD54 putative [Albugo
laibachii Nc14]
Length = 910
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/573 (46%), Positives = 373/573 (65%), Gaps = 33/573 (5%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
VVV +L+ LRPHQR+GV+F+++CV V +GCI+AD+MGLGKTLQ ITLM TLL
Sbjct: 154 VVVPDILTKFLRPHQRDGVQFLFDCVADVENAGRFGCILADDMGLGKTLQSITLMHTLLE 213
Query: 197 ---QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM 253
Q P KP I + IIV P+SLVKNW +EI KWL R+ + + ++ + ++ F+
Sbjct: 214 TSMQDP-TKPTIHRVIIVCPTSLVKNWNDEIQKWLQNRIKTIALFESNREHVIKEIYRFI 272
Query: 254 QT--YGRRPVNP----ILVISYETFRSHASVLHKNE--VGLVLCDEGHRLKNCESQTYQA 305
+ + +P +L++SYETFR HA+ H L++CDE HRLKN SQ +A
Sbjct: 273 DSSCHPHHRTSPTSSKVLILSYETFRMHAAKFHSTPKCCDLLICDEAHRLKNSHSQINRA 332
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L L +RRVLLSGTP+QNDL E++++V F N ILGT +FRKQ+ PILRG++ A+D
Sbjct: 333 LAALACRRRVLLSGTPMQNDLEEFYAMVDFTNPDILGTPAKFRKQFMGPILRGREPDATD 392
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E++ A L IVN+ ++RR + L +K+LP K QV+C ++ LQ++LY ++S
Sbjct: 393 KEQSLAQGCSWTLCNIVNQFILRRGNTLNAKHLPPKLMQVICCPLSSLQEKLYKRFLESK 452
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG---ADGFENAMNILPTGY 482
A+R MK + + L SIT+LKKLCNHP L+ T GFE+ I+ +
Sbjct: 453 AMRNIMK-----QQNVNVLPSITALKKLCNHPLLLFKDDGTALLKLPGFEDCQQIIASEQ 507
Query: 483 AASYKSGKLLIE----------LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
++ SG+ S KL +LD ++ +++ T ++IV+VSNYTQTLDL
Sbjct: 508 KNNFTSGQRAFSTNQKQTCHPGWSGKLQLLDHLMQMMRKETKERIVVVSNYTQTLDLVSL 567
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L R + +VRLDG+++ KKR ++V+ FN T++ F F+LSSKAGGCGLNLIGANRLV+F
Sbjct: 568 LCSERNWPFVRLDGTISPKKRQQMVDVFNDPTTHSFAFLLSSKAGGCGLNLIGANRLVLF 627
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNPA D QA ARVWR+GQK+ C+VYRFL+TGS+EEK+ QRQ K+ L S V D +D
Sbjct: 628 DPDWNPATDKQAAARVWREGQKQMCYVYRFLATGSLEEKIFQRQLSKEGLQSIVDD--KD 685
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
S +L+ LF L+E T SDTHD+++C+RC
Sbjct: 686 EVNSLSSKDLKKLFVLQEATESDTHDRLRCTRC 718
>gi|302845062|ref|XP_002954070.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f.
nagariensis]
gi|300260569|gb|EFJ44787.1| hypothetical protein VOLCADRAFT_40456 [Volvox carteri f.
nagariensis]
Length = 520
Score = 504 bits (1297), Expect = e-139, Method: Compositional matrix adjust.
Identities = 267/527 (50%), Positives = 347/527 (65%), Gaps = 26/527 (4%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
VVVDP+L LRPHQREGV+FM++CVTG R+E GCI+AD+MGLGKTLQ ITL+WTLL
Sbjct: 2 VVVDPMLVRFLRPHQREGVQFMFDCVTGQRLEGKQGCILADDMGLGKTLQGITLLWTLLT 61
Query: 197 QGPL---AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM 253
G P+ +AIIV P+SLV NW NE TKWL GR+ L + ++ ++ + F+
Sbjct: 62 SGHSLLGGCPIARRAIIVCPTSLVSNWDNECTKWLQGRLKTLAMCESTREDVVANIGMFL 121
Query: 254 QTYGRRPVNPILVISYETFRSHASVLH-KNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
V +L+ISYETFR HA L L++CDE HRLKN + T +AL L K
Sbjct: 122 HPSN---VYKVLIISYETFRMHAERLQVPGSCDLLVCDEAHRLKNDATLTNRALDNLPCK 178
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RRVLLSGTP+QN L E+F++V F N G+LG +FRK YE PIL G++ A+ +
Sbjct: 179 RRVLLSGTPMQNHLDEFFAMVDFCNPGVLGAPTQFRKYYELPILAGREPDAAPEQVVLGE 238
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
ER +L G+ N ++RRT+ LLS++LP K +VVC ++T+LQ++LY + ++S A RR +
Sbjct: 239 ERSRELSGLTNNFILRRTNKLLSQHLPPKVIEVVCCRLTELQRQLYHHFLQSKAARRVLN 298
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ--------TGADGFENAMNILPTGYAA 484
G + LS+ITSLKKLCNHP L+ D + + ++ P G
Sbjct: 299 GRTS-----GVLSAITSLKKLCNHPKLIYDAVHRRFSPGHVRSCSCLSDVGSLFPPGLFD 353
Query: 485 SYKSGKLLIE-----LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY 539
+ + G+ + LS K+ VL ML V+ T D+IVLVSNYT +LDLF +L + RGY
Sbjct: 354 NGRVGRGGMAAGWETLSGKMAVLARMLHVLYTETHDRIVLVSNYTSSLDLFAQLCRERGY 413
Query: 540 KYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
+VRLDG+ TI KR K+V+ FN + +F F+LSSKAGGCGLNLIGANRLV+FDPDWNPA
Sbjct: 414 PFVRLDGTTTINKRQKLVKVFNDPAERQFAFLLSSKAGGCGLNLIGANRLVLFDPDWNPA 473
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
ND QA ARVWRDGQ+K FVYRFLSTGSIEEK+ QRQ K+ L V
Sbjct: 474 NDQQAAARVWRDGQRKRVFVYRFLSTGSIEEKVYQRQLSKEGLKQLV 520
>gi|358343867|ref|XP_003636017.1| DNA repair and recombination protein RAD54-like protein [Medicago
truncatula]
gi|355501952|gb|AES83155.1| DNA repair and recombination protein RAD54-like protein [Medicago
truncatula]
Length = 1004
Score = 503 bits (1295), Expect = e-139, Method: Compositional matrix adjust.
Identities = 265/551 (48%), Positives = 365/551 (66%), Gaps = 20/551 (3%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGV-RIEDAYGCIMADEMGLGKTLQCITLMWTLL 195
+ VDP+L LRPHQREGV+FM++CV G+ D GCI+AD+MGLGKTLQ ITL++TL+
Sbjct: 174 IAVDPLLVRFLRPHQREGVQFMFDCVAGLCETPDINGCILADDMGLGKTLQSITLLYTLI 233
Query: 196 RQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
QG KP++ KAIIV P+SLV NW EI KW+G RV + + ++ ++ + +NSF
Sbjct: 234 CQGFDGKPMVRKAIIVTPTSLVSNWEAEIKKWVGDRVRLVALCETTRQDVISGINSFKSP 293
Query: 256 YGRRPVNPILVISYETFRSHASVLHKN-EVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
G+ V L++SYETFR H+ + L++CDE HRLKN ++ T +AL L KRR
Sbjct: 294 QGKFQV---LIVSYETFRMHSEKFSSSGSCDLLICDEAHRLKNDQTITNKALAALPCKRR 350
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
VLLSGTP+QNDL E+F++V+F N GILG FR+ +E PI+ G++ A+ E+ ER
Sbjct: 351 VLLSGTPLQNDLEEFFAMVNFTNPGILGGIAHFRRHFEAPIICGREPAATAEEKKLGAER 410
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+L VN+ ++RRT+ALLS +LP K +VVC K+T LQ +LY + I+S V+R +
Sbjct: 411 TAELSAKVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQSDLYKHFIQSKNVKRAIT-- 468
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA---DGFENAMNILP----TGYAASYK 487
E K L+ IT+LKKLCNHP L+ D I++G+ GFE+ + P +G + S+
Sbjct: 469 EELKHSKI-LAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPNMLSGRSGSWT 527
Query: 488 SGK-LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
G +ELS K+ VL +L ++ T+D+IVLVSNYTQTLDLF +L + R Y ++RLDG
Sbjct: 528 GGDGGWVELSGKMQVLARLLHQLRQRTNDRIVLVSNYTQTLDLFAQLCRERKYPHLRLDG 587
Query: 547 SMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+ +I KR K+V N S +EF+F+LSSKAGGCGLNLIGANRLV+FDPDWNPAND QA A
Sbjct: 588 ATSISKRQKLVNCLNDPSKDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAA 647
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK ++YRFL S+ ++ M ++ +K + D + S +LR+LF
Sbjct: 648 RVWRDGQKKRVYIYRFL---SVYQRQMAKEGLQKVIQREQNDSVAAQSNFLSTEDLRNLF 704
Query: 666 QLEENTISDTH 676
+EN H
Sbjct: 705 TFDENVKQVAH 715
>gi|330840974|ref|XP_003292481.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
gi|325077256|gb|EGC30980.1| hypothetical protein DICPUDRAFT_50468 [Dictyostelium purpureum]
Length = 928
Score = 502 bits (1292), Expect = e-139, Method: Compositional matrix adjust.
Identities = 284/677 (41%), Positives = 413/677 (61%), Gaps = 41/677 (6%)
Query: 86 GYSTKALGVRREGAR--KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVL 143
G+ G+ + AR K LH+P APN+LVLYTP ++ + ++HVVVDP+L
Sbjct: 222 GFQVPVKGMEK-AARLTKPLHNPLAPNSLVLYTPVDMTGEN---------RIHVVVDPIL 271
Query: 144 SNILRPHQREGVKFMYECVTGVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
S LRPHQREGVKF+++C+ G R GCI+AD+MGLGK++Q IT++WTLL+QGP +
Sbjct: 272 SAKLRPHQREGVKFVFDCLLGFRGGFKGNGCILADDMGLGKSIQAITILWTLLKQGPKGE 331
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
P KA+IVAP SLV NWC E+ KWLG + + I G S KL+ +G P +
Sbjct: 332 PTAKKAVIVAPCSLVGNWCKELKKWLGDGINTVAI-GESTKTGRAKLSEL--EFG--PAD 386
Query: 263 PILVISYETFRSHA-SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ISY+ R + V + +GLV+CDEGHRLKN E +T +A+ + RRV+LSGTP
Sbjct: 387 -VLIISYDQLRIYCEDVCKISSIGLVICDEGHRLKNAEIKTTKAVSMIPTPRRVILSGTP 445
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL E++++V+FVN G+L F+ Y+ PI+ + A++ ER ER +L +
Sbjct: 446 IQNDLTEFYAMVNFVNPGLLKNVATFKNVYDAPIVASRSPEATEEERKIGRERSAELSRL 505
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS--DAVRRTMKGGENTKL 439
+ ++RRT+ + ++YLP K E VV K+TDLQK +Y +LIK D+ + G
Sbjct: 506 TGQFILRRTAIVNTQYLPPKVEYVVFCKLTDLQKSIYRHLIKEAKDSCFASASG------ 559
Query: 440 GMTALSSITSLKKLCNHPDLVM--DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
AL IT+LKKL N +LV DK + + ++ +++ P + + S+
Sbjct: 560 ---ALPLITTLKKLSNCAELVYLPDK-EAPTEVDKSVLSLFPKEWNPKV----FQPQYSS 611
Query: 498 KLMVLDTMLAVIKMT-TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
KL+ +D +L I+ + + DK+V++SNYTQTL++ + K RGY Y +LDGS KR ++
Sbjct: 612 KLLFVDRLLTKIRDSKSGDKVVIISNYTQTLEVLAIMCKTRGYAYFQLDGSTPNAKRQQL 671
Query: 557 VETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
V+ +N EF F+LSSKAGG GLNLIG N LV+FD DWNPAND Q+MARVWR+GQKK
Sbjct: 672 VDLYNDPKRPEFAFLLSSKAGGVGLNLIGGNHLVLFDADWNPANDAQSMARVWREGQKKV 731
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT 675
+YR +TG+IEEK+ QRQ K+ALS+ + + + + + F +L+ +F E+TI DT
Sbjct: 732 VSIYRTFTTGTIEEKIFQRQLTKQALSTSITEGDSENSPAFDTKDLKDIFNYREDTICDT 791
Query: 676 HDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQH 735
HD + C +C ++ ++ ++L+ W HV E L DP + VSFVF
Sbjct: 792 HDMLSC-KCAPSARIPKHKRDTLSINELNSWQHVFEMDKLKDPKVAAACQDIVSFVFVND 850
Query: 736 STKAEKSKVVTEEEEKE 752
A+K+K E K+
Sbjct: 851 KGPADKNKKSNENVNKQ 867
>gi|189230031|ref|NP_001121509.1| RAD54 homolog B [Xenopus (Silurana) tropicalis]
gi|183986491|gb|AAI66345.1| rad54b protein [Xenopus (Silurana) tropicalis]
Length = 897
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 290/700 (41%), Positives = 410/700 (58%), Gaps = 50/700 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
I KPF P+ N G ++K + K HDP APNA V+ P Q H +
Sbjct: 208 IQMKPFTNPLRNDRKG--ASKENMFKELQNIKPRHDPCAPNAFVMPKPTQ---HHQWAYN 262
Query: 130 KDKIQ-VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
K + V VVVDP L+ LRPHQ+EG+ F+YECV G+R+ + +G I+ADEMGLGKTLQCI
Sbjct: 263 KTGLPIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVNERFGAILADEMGLGKTLQCI 322
Query: 189 TLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEID 246
+L+WTL+RQGP KP+I KA+IV P SLVKNW E KWLG R+ +D D
Sbjct: 323 SLIWTLIRQGPYGGKPVIKKALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQ------D 376
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+K+ FM++ P+ +L+ISYE + + +V+CDEGHRLKN +T AL
Sbjct: 377 HKVEEFMKS----PLYSVLIISYEMLLRCLEQIQSLDFDVVICDEGHRLKNTSIKTTSAL 432
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L +R++LSGTP+QNDL E+F+L+ FVN LG+ +RK +E PI+R ++ A+
Sbjct: 433 ASLTCSKRIILSGTPVQNDLQEFFALIEFVNPAALGSLSTYRKIFEEPIIRSREPTATTE 492
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E+ ER +L + ++RRT +++K+LP K E +V + + Q +LY L+ S
Sbjct: 493 EKNLGEERAAELARLTGLFILRRTQEVINKFLPPKIESIVFCRPSQFQLDLYRKLLNSRT 552
Query: 427 VRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKIQ---TGADGFE-NAMNILPTG 481
V+ + G GE++ L I +LKKLCNHP L+ IQ T D E N +
Sbjct: 553 VKSCLLGSGESSP----HLVCIGALKKLCNHPFLLFRTIQGKSTNPDQDEHNLYESVAEV 608
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
+ Y K+ S KL+VL +L+ I+ ++ +++VLVSNYTQTL++ + L GY
Sbjct: 609 FPQDYDGAKISESESGKLLVLSNLLSRIRELSPSERVVLVSNYTQTLNILQDLCNQHGYS 668
Query: 541 YVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
RLDG + +R +V+ FN K S +FIF+LSSKAGG GLNLIGA+ L+++D DWNPAN
Sbjct: 669 CTRLDGQTPVTQRQHIVDGFNSKYSTDFIFLLSSKAGGVGLNLIGASHLILYDLDWNPAN 728
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSM 658
D QAMARVWRDGQ+ +YR L+TGS+EEK+ QRQ K+ LS VVD + FS+
Sbjct: 729 DIQAMARVWRDGQRHTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKKSEHIRFSL 788
Query: 659 SELRSLFQLEENTISDTHDKIKC----SRCVNGIQVKPPPLESDC--------------T 700
ELR+LF L E+T THD ++C + C + + P + C
Sbjct: 789 DELRNLFTLHEDTDCVTHDLLQCDCTITNCHSDGSPQKPLIHRSCQLGLHQDQLNKNFSM 848
Query: 701 DDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAE 740
+L W H + ++ DP L+ +SFVF Q++T ++
Sbjct: 849 SELMQWKHFSGQQNTEDPFLQ-MGKEHISFVF-QNTTNSQ 886
>gi|432908561|ref|XP_004077922.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oryzias latipes]
Length = 928
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/635 (43%), Positives = 386/635 (60%), Gaps = 39/635 (6%)
Query: 72 AKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKD 131
+KPF P + KA G + + K HDP+AP ALV+ P + H L
Sbjct: 254 SKPFTPPTMLGQPAHAGGKAEGKQ---SCKPHHDPSAPGALVMPRPS--TNHQWLHNKAA 308
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM 191
V VVVDP L+ LRPHQR+G+ F+YECV G+R+ YG I+ADEMGLGKTLQ + L
Sbjct: 309 LPVVEVVVDPHLTQHLRPHQRDGLLFLYECVMGMRVASCYGAILADEMGLGKTLQSVALS 368
Query: 192 WTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKL 249
WTLL+QGP KP+ + ++V P SLV+NW E KWLG R++ +D D+++
Sbjct: 369 WTLLKQGPYGGKPVAKRVLVVTPGSLVQNWKAEFNKWLGRERISVFTVDQ------DHRI 422
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
F+ + P++ +LVISYE + K E GL++CDEGHRLKN +T AL L
Sbjct: 423 EQFVLS----PLHSVLVISYEMLLRCLEQVQKVEFGLIICDEGHRLKNSSIKTSSALTSL 478
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
RRV+L+GTP+QNDL E+ +++ FVN GILG+ +RK YE PILR + ++ ER
Sbjct: 479 SCDRRVILTGTPVQNDLQEFHAIIEFVNPGILGSPTAYRKLYEEPILRSRQPSCTEEERV 538
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
ER +L + ++RRT ++++YLP + + + + + LQ+ELY L+ R
Sbjct: 539 LGEERAAELSRLTGMFILRRTQEIINRYLPPRVDWTLFCEPSALQQELYQRLLCHRVFRD 598
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDL----VMDKIQTG---ADGFENAMNILPTGY 482
M+G T T L+ IT+LKKLCNHP L V ++ ++G + +E ++ P Y
Sbjct: 599 CMQGSTQTS---THLACITALKKLCNHPGLLYATVKERTESGTLESSLYERLADLFPETY 655
Query: 483 A-ASYKSGKLLIELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
+ A + + S KL+VL +LA I+ ++ D++VLVSNYTQTLDL + L K GY
Sbjct: 656 SLAGFNTAD-----SGKLLVLSDLLAAIRQLSPSDRVVLVSNYTQTLDLLQDLCKHMGYT 710
Query: 541 YVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
+ RLDG +R ++V+ FN + S F+F+LSSKAGG GLNLIGA+ LV++D DWNPAN
Sbjct: 711 FCRLDGQTPTGQRQRLVDGFNSSYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPAN 770
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH--FS 657
D QAMARVWRDGQKK +YR L+ G+IEE++ QRQ K+ LS VVD + A H FS
Sbjct: 771 DIQAMARVWRDGQKKTVHIYRLLTAGTIEERIYQRQVSKQGLSGTVVDMGKG-AEHTSFS 829
Query: 658 MSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKP 692
SELR LF L E T THD + C ++G + P
Sbjct: 830 SSELRDLFSLTE-TPCLTHDLLNCGCSMDGAEEDP 863
>gi|47211681|emb|CAF92845.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 254/400 (63%), Positives = 303/400 (75%), Gaps = 14/400 (3%)
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
S E IR IL++PFKVPI NYTG +ALG++R G RKALHDP A +ALVLY PP L
Sbjct: 1 SPQEAFIRSILSRPFKVPIPNYTGA-LGVRALGLKRAGLRKALHDPLAADALVLYEPPAL 59
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
SAHDLLK DK+K+ VHVVVDPVL +LRPHQREGVKF++ECVTG RI +YGCIMADEMG
Sbjct: 60 SAHDLLKADKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIPGSYGCIMADEMG 119
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQCI L+WTLLRQ P KP IDKAI+V+PSSLV+NW +E+ KWLGGRV L IDGG
Sbjct: 120 LGKTLQCIALVWTLLRQSPDLKPEIDKAIVVSPSSLVRNWSSEVQKWLGGRVHPLVIDGG 179
Query: 241 SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD---------- 290
+K EID +L SF+ GRR +P+L+ISYETFR HA+VLH+ VGLV+CD
Sbjct: 180 TKDEIDRQLVSFISQRGRRVPSPVLIISYETFRLHAAVLHRGSVGLVICDELVLRLTCCC 239
Query: 291 --EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
EGHRLKN ++QTYQAL + A+RRVL+SGTPIQNDLLEYFSLVHFVN GILGTAQEF+
Sbjct: 240 DVEGHRLKNADNQTYQALNAMVAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFK 299
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
K++E PIL+G+D+ A + ER E+L QLIG+VNRCLIRRTS +LSKYLPVK EQVVC
Sbjct: 300 KRFELPILKGRDADAKEQERQAGEEKLSQLIGVVNRCLIRRTSDILSKYLPVKVEQVVCC 359
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
+++ LQKELY ++ + G N L L +
Sbjct: 360 RLSPLQKELYKRFLRQAGPLDAL-GDANANLSQPVLHHVA 398
>gi|224008985|ref|XP_002293451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220970851|gb|EED89187.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 543
Score = 496 bits (1278), Expect = e-137, Method: Compositional matrix adjust.
Identities = 257/554 (46%), Positives = 364/554 (65%), Gaps = 19/554 (3%)
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
V PVL+ LRPHQREGV+FMY+CV G++ GCI+AD+MGLGKTLQ +TL+WTLL+ G
Sbjct: 1 VPPVLAKWLRPHQREGVQFMYDCVMGLKDFQGAGCILADDMGLGKTLQSVTLIWTLLQTG 60
Query: 199 PLAKPL--IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
A + ++ I+V P SLVKNW NE KWLG G V L + + ++ ++ F++T
Sbjct: 61 ITANNIRTCNRIIVVCPCSLVKNWDNEFIKWLGPGVVKTLALAESDRKTVEKNIDCFVKT 120
Query: 256 YGRRPVNPILVISYETFRSHASVL--HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
+ +L+ SYET R+H L +K+ L++CDE HRLKN E+QT AL L +R
Sbjct: 121 ----KMFNVLICSYETLRTHVGRLTKYKDCCDLLVCDEAHRLKNRENQTSMALNSLPVRR 176
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
RVLL+GTP+QNDL E++++V F N GILGT ++FR++ PILRG++ A++ ++T+ E
Sbjct: 177 RVLLTGTPMQNDLEEFYAMVDFTNPGILGTQEDFRRKMLYPILRGREPDATEKQKTRMME 236
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
+ VN ++RR + L +++LP K QVVC +T++Q +Y +L S A++ + G
Sbjct: 237 IQNDMSTTVNEFILRRVNTLNAQHLPPKLVQVVCCNLTEIQSNMYAHLCNSKAMQHVLDG 296
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
+ + L SI L KLCNHP LV+++ + A G + +P ++ ++
Sbjct: 297 KQ-----VNCLGSIQMLMKLCNHPSLVVNEKSSAAPGADGIAKFMPYEAIRGDRNAPVMP 351
Query: 494 ELSAKLMVLDTMLAVIKM--TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
ELS K+ VL ++ ++ +DKIV+VSNYTQTLDL R+ + + + RLDGS+++K
Sbjct: 352 ELSGKMFVLFRLMREMRRPGNGNDKIVIVSNYTQTLDLIGRMCRENNWGFCRLDGSISMK 411
Query: 552 KRAKVVETFNKTSNEFI-FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR K+ + FN S+ + F+LSSKAGGCGLNLIG NRLV+FDPDWNPA D QA AR WRD
Sbjct: 412 KRQKMCDEFNDPSSSLVAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWRD 471
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQKK CF YRFL+TG++EEK+ QRQ K+ L S V D +D S +L++LF+L
Sbjct: 472 GQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDD--KDQVNSLSTKDLKNLFKLRSG 529
Query: 671 TISDTHDKIKCSRC 684
T SDTHDK+KC RC
Sbjct: 530 TPSDTHDKLKCERC 543
>gi|298711307|emb|CBJ26552.1| DNA repair and recombination protein RAD54 homolog [Ectocarpus
siliculosus]
Length = 1510
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 255/580 (43%), Positives = 366/580 (63%), Gaps = 43/580 (7%)
Query: 136 HVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLL 195
+ VDP L LRPHQREGV+FM+ECV G+R + GCI+AD+MGLGKTLQ I ++WTLL
Sbjct: 183 RISVDPRLCKFLRPHQREGVQFMFECVMGMREFEGSGCILADDMGLGKTLQSIAVLWTLL 242
Query: 196 RQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQ 254
+QG +P + +A++V P+SLVKNW EI KWL G + + ++ ++ +N F+
Sbjct: 243 KQGKAKGQPAVRRAVVVCPTSLVKNWEAEIDKWLKGDCRVIALSETTREQVVQSINLFLA 302
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNE---VGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ V +L++SYETFR H+ + L++CDE HRLKN E+ T QAL LK
Sbjct: 303 SM----VYRVLIVSYETFRLHSKRFYAKADTCCDLLICDEAHRLKNAETATNQALSALKC 358
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
++RVLLSGTP+QNDL E++++ F N G+LG+ FRK++ +PIL G++ A+D + +A
Sbjct: 359 RKRVLLSGTPMQNDLEEFYAMTDFTNPGVLGSGSSFRKKFLSPILAGREPSATDKQVERA 418
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+ ++ +VN ++RRT+ + +K+LP K QVVC ++T +Q ++Y +L+ S +R +
Sbjct: 419 QKCQNEMSTVVNEFILRRTNNINAKHLPPKLVQVVCCRLTPVQTKIYKHLLSSKEIRHIL 478
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA--MNILPTGYAASYKSG 489
G + LSSI +++KLCNHP L+++ G D +A ++LP ++S
Sbjct: 479 NGKQT-----NILSSIGAMQKLCNHPKLLVEGA-AGRDSGSHAEIASMLPAETSSSSALA 532
Query: 490 K------------------------LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
+ + E S K+ L ++ ++ T DD+IV+VSN+T
Sbjct: 533 EGVGGRGMSGGGGFGRRSSGGMQKGVFPEWSGKMETLFRLMREMRNTGDDRIVVVSNFTS 592
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIG 584
+LDL + + + +VRLDGS + KR K+V FN+ F F+LSSKAGGCGLNLIG
Sbjct: 593 SLDLIGSMCRENSWPFVRLDGSTGVSKRQKMVNAFNEPGPQSFAFLLSSKAGGCGLNLIG 652
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
NRLV+FDPDWNPA D QA ARVWRDGQKK CFVYRF+STG+IEEK+ QRQ K+ L +
Sbjct: 653 GNRLVLFDPDWNPAVDKQAAARVWRDGQKKRCFVYRFVSTGTIEEKVFQRQLSKEGLQNI 712
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
V D EE S +L+ LF+L E T SDTHDK++C RC
Sbjct: 713 VDDKEE--VNSLSSKDLKDLFKLYEGTPSDTHDKLRCKRC 750
>gi|330803641|ref|XP_003289812.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
gi|325080071|gb|EGC33642.1| hypothetical protein DICPUDRAFT_36354 [Dictyostelium purpureum]
Length = 731
Score = 494 bits (1272), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/589 (44%), Positives = 380/589 (64%), Gaps = 30/589 (5%)
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
DP + +ALVLYTPP S D DK VHV+VDP +S LRPHQR GVKF+Y+CVTG
Sbjct: 10 DPNSKDALVLYTPPD-SQLD----DKGNKVVHVIVDPHISQHLRPHQRRGVKFLYDCVTG 64
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
E+ Y G I+AD+MGLGKTLQ + L+WTLL+Q P K I KAIIV PS+LV NW E
Sbjct: 65 TNNEEGYTGAILADQMGLGKTLQTLALVWTLLKQSPTGKSTIKKAIIVTPSTLVNNWKKE 124
Query: 224 ITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
I KW G R+ A + E L++F + + P+L+ISYE R + +L
Sbjct: 125 IQKWFGLDRLIATTLTDSLSKETKTNLDNFNTS-----IKPVLIISYEQCRIFSKILETM 179
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
GL++CDE HRLKN S+T QA+ +KA+R++LL+GTPIQNDL+E++S+V F N G LG
Sbjct: 180 SCGLLVCDEAHRLKNSNSKTTQAINSVKAERKILLTGTPIQNDLVEFYSMVDFCNPGSLG 239
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
+ F+K + PI + ++S + + ++ +L + ++RR S +L KYLP K
Sbjct: 240 SLASFKKNFINPINKSRESTGNPKDIENGTKKSIELSKLTKSFILRRKSNILEKYLPPKR 299
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
QVV +++ LQ++LY +++ S++V+ + G E+ ++LS+IT LKKLCN P L+ D
Sbjct: 300 VQVVFCRLSPLQQDLYKSVLNSNSVQSLINGKESP---ASSLSTITLLKKLCNSPSLLQD 356
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
+ + + Y+ + +S + + KL+ +++++ +K + +K+VLVSN
Sbjct: 357 T-------SDQELQSIFKQYSYNMES---MENEAGKLLFVESLIKQLK-SVGEKLVLVSN 405
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGL 580
YTQTLD+FERL K ++RLDGS++ R +V+ FN SN+ IF+LS+KAGG G+
Sbjct: 406 YTQTLDVFERLCKKLSTDFLRLDGSVSSDTRQSLVDKFNDQSNKKYQIFLLSAKAGGVGI 465
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NLIG N LV++DPDWNPA D QAM RVWR+GQ KP F+YR STG+IEEK+ QRQ K++
Sbjct: 466 NLIGGNHLVLYDPDWNPAIDIQAMERVWREGQNKPVFIYRLFSTGTIEEKIYQRQLMKES 525
Query: 641 LSSCVVDCE-EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
+S+ +VD + D FS+ +L+ +F +NT SDTHD ++C C +GI
Sbjct: 526 ISNSIVDKKFNDNGGGFSLEDLKDIFSYNQNTYSDTHDLLQCG-CGSGI 573
>gi|390338769|ref|XP_785657.3| PREDICTED: DNA repair and recombination protein RAD54B-like
[Strongylocentrotus purpuratus]
Length = 761
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/635 (44%), Positives = 378/635 (59%), Gaps = 41/635 (6%)
Query: 73 KPFKVPILNYTGGGYSTK-ALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKD 131
KPF P TG ST V + A K L+DPT +ALV+ PP S+H ++
Sbjct: 57 KPFANP--QKTGADGSTALQTKVVQPRAAKPLYDPTHQDALVMPRPP--SSHQWQNNQRN 112
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM 191
V VVVDP L + LRPHQ++GV F+YEC+ G+R + G I+ADEMGLGKTLQCITL+
Sbjct: 113 DSIVDVVVDPHLVSKLRPHQQKGVIFLYECIMGLRQYEGCGAILADEMGLGKTLQCITLV 172
Query: 192 WTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKL 249
WTL +QGP KP+I + +IV P SLVKNWC E KWLG R++ P+ K E
Sbjct: 173 WTLFKQGPYGGKPIIKRVLIVTPGSLVKNWCREFRKWLGSERISVFPVSSDKKVE----- 227
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+ + P+ P++VISYE +A + LV+CDEGHRLKN +T L L
Sbjct: 228 -----EFKKSPLFPVMVISYEMMVRYADDIRGITFDLVVCDEGHRLKNSTIKTASLLSSL 282
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RR+LL+GTPIQNDL E++S+V F N G+LGT+ F + YE PILR A+ E+T
Sbjct: 283 AVRRRILLTGTPIQNDLQEFYSIVEFCNPGVLGTSGSFHRVYEEPILRSNQPSATKEEKT 342
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
R +L + + ++RRT + +KYLP K E VV K + LQ LY +L++S +R
Sbjct: 343 LGAARATELSRLTSLFVLRRTQEINNKYLPPKVETVVFCKPSALQLRLYQHLLRSPLIRS 402
Query: 430 TMKGG--ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD-----GFENAM------- 475
+ G + G L I +LKKLCN P L+ + + G E+ +
Sbjct: 403 CLSRGYASSASAGSPHLVCIGALKKLCNDPSLLYQASRKADEEGKRRGGESWLLDHDDEE 462
Query: 476 -----NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM--TTDDKIVLVSNYTQTLD 528
+LP Y Y G+ L+ KL VL ML + T +++VLVSNYTQTLD
Sbjct: 463 ESLYKGLLPI-YPPDYSEGRPLLAHCGKLCVLSEMLRAMHADPTRRERLVLVSNYTQTLD 521
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANR 587
+ + L + GY++ RLDGS KR +VE FN + + E IF+LSSKAGG GLNLIGA+R
Sbjct: 522 ILQALCSIEGYQFCRLDGSTPTAKRQSIVEHFNSSYAKETIFLLSSKAGGVGLNLIGASR 581
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
L+++D DWNPAND QAMARVWRDGQKK +YR ++ G+IEEK+ QRQ K++LS VVD
Sbjct: 582 LLLYDIDWNPANDLQAMARVWRDGQKKTVHIYRLITAGTIEEKIYQRQISKQSLSGAVVD 641
Query: 648 CE-EDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+ + + FS+ +LR LF L + + THD + C
Sbjct: 642 AKGQSGSVKFSLEDLRDLFTLHKGSSCITHDMLSC 676
>gi|348526954|ref|XP_003450984.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Oreochromis niloticus]
Length = 1210
Score = 493 bits (1269), Expect = e-136, Method: Compositional matrix adjust.
Identities = 288/686 (41%), Positives = 404/686 (58%), Gaps = 48/686 (6%)
Query: 73 KPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDK 132
KPF P + G TK E R+ HDP AP ALV+ P + H L
Sbjct: 538 KPFCPPTMVGGAGHRETKP---EEEQTRRPRHDPLAPGALVMPRPS--ANHQWLNNKSGL 592
Query: 133 IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VV+DP L+ LRPHQR+G+ F+YECV G+R YG I+ADEMGLGKTLQ + L W
Sbjct: 593 PVVDVVLDPHLTTHLRPHQRDGLLFLYECVMGMRAAGCYGAILADEMGLGKTLQSVALSW 652
Query: 193 TLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLN 250
TLL+QGP +P+ + ++V P SLV+NW E KWLG R++ +D D+++
Sbjct: 653 TLLKQGPYGGRPVAKRVLVVTPGSLVQNWAAEFNKWLGRERISVFTVDQ------DHRIE 706
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
F+ + P++ +LVISYE + K + GL++CDEGHRLKN +T AL L+
Sbjct: 707 QFVLS----PLHSVLVISYEMLLRCLEQVQKVDFGLIICDEGHRLKNSNIKTSSALSSLE 762
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
RRV+L+GTP+QNDL E+++++ FVN GILG++ +RK YE PILR + ++ ER
Sbjct: 763 CNRRVILTGTPVQNDLQEFYAIIEFVNSGILGSSTAYRKVYEEPILRSRQPSCTEEERVL 822
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
ER +L + ++RRT ++++YLP + + + + + LQ+ELY +L+ R
Sbjct: 823 GEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCEPSSLQRELYKHLLCHRVFRAC 882
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ-TGADGFENAM-NILPTGYAASYKS 488
++G T T L+ IT+LKKLCNHP L+ ++ T A E+++ L + SY S
Sbjct: 883 LQGSTQTH---THLACITALKKLCNHPGLLHITVKRTDAGSVESSLYEGLADLFPESYSS 939
Query: 489 GKLLIELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
G I S KL+VL +LA I+ +++ D++V+VSNYTQTLDL + L GY + RLDG+
Sbjct: 940 GGFTIADSGKLLVLSDLLAAIRQLSSSDRVVVVSNYTQTLDLLQDLCVHMGYTFCRLDGN 999
Query: 548 MTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
+R ++V++FN S F+F+LSSKAGG GLNLIGA+ LV++D DWNPAND QAMAR
Sbjct: 1000 TPTNQRQRLVDSFNSPYSQNFLFLLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMAR 1059
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSL 664
VWRDGQKK +YR L+ G+IEE++ QRQ K+ LS VVD + A H FS S+LR L
Sbjct: 1060 VWRDGQKKTVHIYRLLTAGTIEERIFQRQVSKQGLSGTVVDMGKG-AEHTSFSTSDLRDL 1118
Query: 665 FQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT-----------------DDLSCWH 707
F L E T THD + C ++G +K P E C +L W
Sbjct: 1119 FSLTE-TPCLTHDLLNCGCSMDGT-LKEPVSERPCQLGRQGDRKGAAQKHLSMSELMQWR 1176
Query: 708 HVT-EKRWLVDPILKHCWGAGVSFVF 732
H + + DP L H ++F F
Sbjct: 1177 HFSGDTHSFSDPYLDHARN-NITFAF 1201
>gi|71033369|ref|XP_766326.1| DNA repair protein Rad54 [Theileria parva strain Muguga]
gi|68353283|gb|EAN34043.1| DNA repair protein rad54, putative [Theileria parva]
Length = 786
Score = 492 bits (1267), Expect = e-136, Method: Compositional matrix adjust.
Identities = 293/695 (42%), Positives = 403/695 (57%), Gaps = 83/695 (11%)
Query: 70 ILAKPFKVPILNYTGG---GYSTKALGVRREGARKA----------------LHDPTAPN 110
I+ KPFK P+ + G K LG R + K+ L D N
Sbjct: 51 IILKPFKSPLEGHQPGVSEESQRKTLGCRIKSDTKSFLRDFRAGIYLEKPESLEDLPPDN 110
Query: 111 ALVLYTPPQLSAHDLLKIDKD-KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
LVLYT D D ++QV + VD +LS LR HQR+GV+F+++C+ G++ +
Sbjct: 111 PLVLYTS-----------DPDAEVQVEIKVDSILSRFLRDHQRQGVQFIFDCLMGLKGFN 159
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP----------LIDKAIIVAPSSLVKN 219
GCI+AD+MGLGKTLQ IT+MWTLL QG KP K I+ P+SLV N
Sbjct: 160 GRGCILADDMGLGKTLQSITVMWTLLNQGLDNKPGKALNYSSSTAARKCAIICPASLVNN 219
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
W +EI KWL GR P+ SK ++ + F Y R + +++ SYET+R H S L
Sbjct: 220 WESEIKKWLRGRCPCTPVAESSKEKVISSFQGF--KYDR--TSRVIISSYETYRLHCSYL 275
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ L++CDE HRLKN +++T Q++ AK R++LSGTPIQNDL E++SLV N
Sbjct: 276 EGVNIDLLICDEAHRLKNDKTRTSQSISNSSAKMRLMLSGTPIQNDLNEFYSLVSLCNPD 335
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG FR+ + A+ERL +L I N+ ++RRT+ALL+K LP
Sbjct: 336 VLGDVNSFRRNF------------------AASERLAELSNITNQFVLRRTNALLAKVLP 377
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K V +TD+QK++Y + + S + M ++T + ALS+I SL KLCNHP
Sbjct: 378 PKIILNVFCNLTDVQKDIYKSFVTSRRWKNIM--NQDTVVSR-ALSAIQSLMKLCNHP-F 433
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
++ + + D ++I ++ YK + +LS K +VL +L I+ +D++V+
Sbjct: 434 LLKRGGSSPDVDSLLLDIENATKSSKYKCCR--CDLSGKFLVLYRLLYQIRRHGNDRVVI 491
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGC 578
+SNYTQTLDLFERL K Y + RLDG+ +IKKR K+V TFN SN FIF+LSSKAGGC
Sbjct: 492 ISNYTQTLDLFERLCKECNYPFERLDGTTSIKKRHKLVTTFNDPNSNSFIFLLSSKAGGC 551
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGANRLV+FDPDWNPAND QA+ARVWRDGQ K C++YRF STG+IEEK+ QRQ K
Sbjct: 552 GINLIGANRLVLFDPDWNPANDKQALARVWRDGQTKVCYIYRFFSTGTIEEKIYQRQICK 611
Query: 639 KALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN----------- 686
LSS +V D ++ S L++LF+ +EN ISDTHD I+C RC N
Sbjct: 612 DGLSSMLVTDGINELKDSLSGEYLKNLFEYKENIISDTHDLIECKRCSNQDGKFVKLIIT 671
Query: 687 -GIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
G + P + DDL+ W H ++ + D L
Sbjct: 672 LGPVMHVPQDKDFLEDDLNTWAHHSDLTTIPDEYL 706
>gi|194214970|ref|XP_001915028.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Equus caballus]
Length = 910
Score = 490 bits (1261), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/671 (42%), Positives = 388/671 (57%), Gaps = 61/671 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P S H + V VV+DP L LRPHQ+EG++F+YE
Sbjct: 252 KPRHDPCAPNSLVMLRPD--SRHQWMFNKNCFPLVDVVIDPHLVCHLRPHQKEGIRFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G R+ D YG I+ADEMGLGKT+QCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGFRVNDRYGAILADEMGLGKTIQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ + D+K+ F ++ P +L+ISYE
Sbjct: 370 WRKEFQKWLGSERIKIFAVGQ------DHKIEEFTKS----PFYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++RV+L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 VKNIKFDLLICDEGHRLKNSAVKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG +RK YE PI+ + AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGPLSSYRKIYEEPIILSRQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCQPAALQIELYRKLLNSRAVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ +E +N+ P A Y E S KL VL +L
Sbjct: 596 CLLFNSIKEKECSSTWDKNEERSLYEGLINVFP----ADYNPFMFTEEESGKLQVLSKLL 651
Query: 507 AVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI+ + +K+VLVSNYTQTL++ + + K GY Y RLDG + +R ++V++FN K S
Sbjct: 652 AVIRELCPAEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPVSQRQQIVDSFNSKYS 711
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 712 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 771
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 772 GTIEEKIYQRQISKQDLSGAVVDLTKTSEHTQFSVEELKNLFTLHESSHCVTHDLLDC-E 830
Query: 684 CVNG----------------IQVKPPPLESDCTDDLSC-----WHHVT-EKRWLVDPILK 721
C G Q+ P P +S LS W H + + L DP L+
Sbjct: 831 CTGGKDHTGDALEKFPISRSCQLGPHPQKSHSLKPLSMAQLKQWKHFSGDHLSLTDPFLE 890
Query: 722 HCWGAGVSFVF 732
VSF F
Sbjct: 891 RI-RENVSFFF 900
>gi|222623720|gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
Length = 952
Score = 489 bits (1259), Expect = e-135, Method: Compositional matrix adjust.
Identities = 296/741 (39%), Positives = 415/741 (56%), Gaps = 113/741 (15%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGV-RREGARKAL--HDPTAPNAL--VLYTPPQLSAHD 124
I KPFK P N GYS + RR ARK P A+ +L P +S+ D
Sbjct: 137 IARKPFKPPCQN----GYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDD 192
Query: 125 LLKI-------------------DKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTG 164
++ DK+ + VD +L LRPHQREGV+FM++CV+G
Sbjct: 193 SVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSG 252
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
+ +D GCI+AD+MGLGKTLQ ITL++TLL QG AKP++ +A++V P+SLV NW +E
Sbjct: 253 LLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE 312
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-N 282
I KWL GRV L + ++A++ + + SF++ R V L++SYETFR H+S +
Sbjct: 313 IIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPG 369
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+FS+V+F N G+LG
Sbjct: 370 SCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLG 429
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
A FR+ YE PI+ G++ AS E+ +ER +L VN ++RRT+ALLS +LP K
Sbjct: 430 DATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKI 489
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+VVC K+T LQ LY + I S V+R + G L+ IT+LKKLCNHP L+ D
Sbjct: 490 VEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS---KVLAYITALKKLCNHPKLIYD 546
Query: 463 KIQ---TGADGFENAMNILP----TGYAASYK-SGKLLIELSAKLMVLDTMLAVIKMTTD 514
I+ +G GF++ + P +G + S+ G + +ELS K+ VL +L +++ TD
Sbjct: 547 TIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTD 606
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSS 573
D+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LSS
Sbjct: 607 DRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSS 666
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGGCGLNL+G NRL++FDPDWNPAND Q R +S +++ + Q
Sbjct: 667 KAGGCGLNLVGGNRLILFDPDWNPANDKQVYQRQ--------------MSKEGLQKVIQQ 712
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-------VN 686
QA K S + S +LR LF E S+ H+ +KC+RC ++
Sbjct: 713 EQADGKMQGSSL-----------STEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMVLD 761
Query: 687 GIQVKPPPLESDCTD-----------------------------------DLSCWHHVTE 711
G + E + ++ DL W H ++
Sbjct: 762 GSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSD 821
Query: 712 KRWLVDPILKHCWGAGVSFVF 732
+ D IL+ G VSFVF
Sbjct: 822 PSTVPDTILQCSSGDEVSFVF 842
>gi|156379220|ref|XP_001631356.1| predicted protein [Nematostella vectensis]
gi|156218395|gb|EDO39293.1| predicted protein [Nematostella vectensis]
Length = 836
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 293/711 (41%), Positives = 407/711 (57%), Gaps = 44/711 (6%)
Query: 2 RSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRS-CTSRKPL---GSVDNEDEPNSKLPMTK 57
RSL+ L + G KT + +E + C K L GS+ +ED + K +
Sbjct: 81 RSLSLKDLEGKEIAKGSGYKTAELQILQEGHTLCAGGKELEIMGSISSEDYLSGKCFQST 140
Query: 58 EEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP 117
+S ++K F P + + TK+ + R R H APNAL L P
Sbjct: 141 ASVSSSIVAPLTAVSKSFVNPAKHKSSKTGPTKSAALSRMTPR---HSIDAPNALALPRP 197
Query: 118 PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
++H L + V VVVDP L LRPHQR+GV F+YECV G+R + G I+AD
Sbjct: 198 S--ASHQLANNKSVQPLVDVVVDPHLGQHLRPHQRDGVLFLYECVMGLRNFNGNGAILAD 255
Query: 178 EMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAAL 235
EMGLGKTLQCI L+WTL +QGP +P+ ++ +I+ P SLVKNWC E KWLG R+
Sbjct: 256 EMGLGKTLQCIALIWTLHKQGPYGGQPVCNRILIITPGSLVKNWCAEFRKWLGNERMRVF 315
Query: 236 PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
P+ D ++ F+ + P+ P+L+ISYE F + + L +CDE HRL
Sbjct: 316 PVTS------DMRVKEFIIS----PIYPVLIISYEMFIRSQDDIMNIKFDLFICDEAHRL 365
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN +T + GLK +RRVLL+GTPIQNDL E+ +L+ N G+LGT FR+ YE PI
Sbjct: 366 KNSAIKTTTLISGLKTRRRVLLTGTPIQNDLKEFHTLIELCNPGVLGTL--FRRVYEQPI 423
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
+ GQ A+ ++ R +L + +RRTS + KYLP K E VV + LQ
Sbjct: 424 VNGQQPGATSEDKLLGQTRASELNRLTRLFFLRRTSEINEKYLPPKVEMVVFCRPAHLQV 483
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG----- 470
LY +L+ S +R ++ + T L I +LKKLCNHP L+ Q GA+
Sbjct: 484 TLYRHLLTSRFLRGCLRASCPSS---THLECIGALKKLCNHPTLLYSASQ-GANTLGDED 539
Query: 471 ----FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
++ + + P AS +L I S KL VL++ML I T +++VLVSNY+QT
Sbjct: 540 QVSLYDGLLKLFPECNDAS----ELSIAQSGKLTVLNSMLEEIH-CTGERVVLVSNYSQT 594
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGA 585
LD+ ++L ++ Y+Y+RLDGS KR +VE FN K +F+F+LSSKAGG GLNLIGA
Sbjct: 595 LDILQKLCTVKKYRYLRLDGSTPTAKRQSLVERFNAKHCQDFVFLLSSKAGGVGLNLIGA 654
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
+RL+++D DWNPAND QAMARVWRDGQ++ +YR L+TG+IEEK+ QRQ K+ LS V
Sbjct: 655 SRLILYDIDWNPANDLQAMARVWRDGQRRRVVIYRLLTTGTIEEKIYQRQTTKQGLSGAV 714
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC--VNGIQVKPPP 694
D + V FS +++ LF L+E T+ THD ++C RC V + +P P
Sbjct: 715 ADDRKQVKVDFSQEDVKDLFTLDELTVCSTHDLLQCQRCNRVQQAEKEPDP 765
>gi|338728445|ref|XP_003365673.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Equus caballus]
Length = 727
Score = 489 bits (1258), Expect = e-135, Method: Compositional matrix adjust.
Identities = 287/671 (42%), Positives = 388/671 (57%), Gaps = 61/671 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P S H + V VV+DP L LRPHQ+EG++F+YE
Sbjct: 69 KPRHDPCAPNSLVMLRPD--SRHQWMFNKNCFPLVDVVIDPHLVCHLRPHQKEGIRFLYE 126
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G R+ D YG I+ADEMGLGKT+QCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 127 CVMGFRVNDRYGAILADEMGLGKTIQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 186
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ + D+K+ F ++ P +L+ISYE
Sbjct: 187 WRKEFQKWLGSERIKIFAVGQ------DHKIEEFTKS----PFYSVLIISYEMLLRSLDQ 236
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++RV+L+GTP+QNDL E+F+L+ FVN
Sbjct: 237 VKNIKFDLLICDEGHRLKNSAVKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNP 296
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG +RK YE PI+ + AS+ E+ R +L + ++RRT +++KYL
Sbjct: 297 GILGPLSSYRKIYEEPIILSRQPSASEEEKELGERRAAELTCLTGLFILRRTQEVINKYL 356
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G EN+ L I +LKKLCNHP
Sbjct: 357 PPKIENVVFCQPAALQIELYRKLLNSRAVRFCLQGLLENS----PHLICIGALKKLCNHP 412
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ +E +N+ P A Y E S KL VL +L
Sbjct: 413 CLLFNSIKEKECSSTWDKNEERSLYEGLINVFP----ADYNPFMFTEEESGKLQVLSKLL 468
Query: 507 AVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI+ + +K+VLVSNYTQTL++ + + K GY Y RLDG + +R ++V++FN K S
Sbjct: 469 AVIRELCPAEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPVSQRQQIVDSFNSKYS 528
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 529 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 588
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 589 GTIEEKIYQRQISKQDLSGAVVDLTKTSEHTQFSVEELKNLFTLHESSHCVTHDLLDC-E 647
Query: 684 CVNG----------------IQVKPPPLESDCTDDLSC-----WHHVT-EKRWLVDPILK 721
C G Q+ P P +S LS W H + + L DP L+
Sbjct: 648 CTGGKDHTGDALEKFPISRSCQLGPHPQKSHSLKPLSMAQLKQWKHFSGDHLSLTDPFLE 707
Query: 722 HCWGAGVSFVF 732
VSF F
Sbjct: 708 RI-RENVSFFF 717
>gi|218191620|gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
Length = 952
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 296/741 (39%), Positives = 414/741 (55%), Gaps = 113/741 (15%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGV-RREGARKAL--HDPTAPNAL--VLYTPPQLSAHD 124
I KPFK P N GYS + RR ARK P A+ +L P +S+ D
Sbjct: 137 IARKPFKPPCQN----GYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDD 192
Query: 125 LLK-------------------IDKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTG 164
++ DK+ + VD +L LRPHQREGV+FM++CV+G
Sbjct: 193 SVEKEESLPPGIEPLILWQPEGCDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSG 252
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
+ +D GCI+AD+MGLGKTLQ ITL++TLL QG AKP++ +A++V P+SLV NW +E
Sbjct: 253 LLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE 312
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-N 282
I KWL GRV L + ++A++ + + SF++ R V L++SYETFR H+S +
Sbjct: 313 IIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPG 369
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+FS+V+F N G+LG
Sbjct: 370 SCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLG 429
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
A FR+ YE PI+ G++ AS E+ +ER +L VN ++RRT+ALLS +LP K
Sbjct: 430 DATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKI 489
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+VVC K+T LQ LY + I S V+R + G L+ IT+LKKLCNHP L+ D
Sbjct: 490 VEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS---KVLAYITALKKLCNHPKLIYD 546
Query: 463 KIQ---TGADGFENAMNILP----TGYAASYK-SGKLLIELSAKLMVLDTMLAVIKMTTD 514
I+ +G GF++ + P +G + S+ G + +ELS K+ VL +L + + TD
Sbjct: 547 TIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLHLKTD 606
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSS 573
D+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LSS
Sbjct: 607 DRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSS 666
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGGCGLNL+G NRL++FDPDWNPAND Q R +S +++ + Q
Sbjct: 667 KAGGCGLNLVGGNRLILFDPDWNPANDKQVYQRQ--------------MSKEGLQKVIQQ 712
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-------VN 686
QA K S + S +LR LF E S+ H+ +KC+RC ++
Sbjct: 713 EQADGKMQGSSL-----------STEDLRDLFTFHEQVRSEIHENLKCNRCNKDGCMVLD 761
Query: 687 GIQVKPPPLESDCTD-----------------------------------DLSCWHHVTE 711
G + E + ++ DL W H ++
Sbjct: 762 GSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSD 821
Query: 712 KRWLVDPILKHCWGAGVSFVF 732
+ D IL+ G VSFVF
Sbjct: 822 PSTVPDTILQCSSGDEVSFVF 842
>gi|410905419|ref|XP_003966189.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Takifugu
rubripes]
Length = 1164
Score = 488 bits (1257), Expect = e-135, Method: Compositional matrix adjust.
Identities = 283/648 (43%), Positives = 387/648 (59%), Gaps = 42/648 (6%)
Query: 69 QILAKPFKVPILNYTGGGYSTKALGVRREGAR--KALHDPTAPNALVLYTPPQLSAHDLL 126
++L+KPF P L GGG+S G R E K+ HDP AP ALV+ P S H
Sbjct: 481 RLLSKPFCPPTL--LGGGHS----GSRPEEEETCKSRHDPMAPGALVMPRPS--SNHQWS 532
Query: 127 KIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQ 186
V VVVDP ++ LRPHQREG+ F+YECV G+R G I+ADEMGLGKTLQ
Sbjct: 533 HNKSGLPVVDVVVDPHVNVHLRPHQREGLIFLYECVMGMRAAGGSGAILADEMGLGKTLQ 592
Query: 187 CITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAE 244
+ L WTLL+QGP KP++ + ++V P SLV+NW E KWLG R+ +D
Sbjct: 593 SVALSWTLLKQGPYGGKPVVKRVLVVTPGSLVQNWGREFNKWLGRERIQVFTVDQ----- 647
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
D+++ F+ + P++ +LVISYE + K E GL++CDEGHRLKN +T
Sbjct: 648 -DHRVEHFVLS----PLHSVLVISYEMLLRCLDQVQKVEFGLIICDEGHRLKNSSIKTSS 702
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL L RRV+L+GTP+QNDL E+++++ FVN GILG++ +RK YE PIL + +
Sbjct: 703 ALNSLSCSRRVILTGTPVQNDLQEFYAIIEFVNPGILGSSTAYRKVYEEPILHSRQPSCT 762
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ ER ER +L + ++RRT ++++YLP + + + + LQ ELY +L+
Sbjct: 763 EEERVLGEERAAELSRLTGMFILRRTQEIINRYLPPRLDWTLFCAPSPLQLELYKHLLCH 822
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG-------FENAMNI 477
R ++ T T L+ IT+LKKLCNHP L+ +Q D +E +
Sbjct: 823 RVFRSCLQAATQTH---THLACITALKKLCNHPVLLYSTVQERTDNGSEEGSFYEGLAEL 879
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKL 536
P SY SG+L S KLMVL +L I +++ D++V+VSNYT+TLDL E L
Sbjct: 880 FP----GSYSSGELTTADSGKLMVLSDLLGAIRRLSPSDRVVVVSNYTKTLDLLEDLCVA 935
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
GY + RLDG +R ++V++FN S F+F+LSSKAGG GLNL+GA+ LV++D DW
Sbjct: 936 MGYTFCRLDGHTPTGQRQRLVDSFNSAYSQNFLFLLSSKAGGVGLNLVGASHLVLYDIDW 995
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPAND QAMARVWRDGQKK +YR L+ G+IEE++ QRQ K+ LS VVD + A H
Sbjct: 996 NPANDIQAMARVWRDGQKKTVHIYRLLTAGTIEERVFQRQVSKQGLSGTVVDLGKG-AEH 1054
Query: 656 --FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTD 701
FS +ELR LF L +T THD + CS V+G + P E +D
Sbjct: 1055 ATFSTNELRDLFSL-TDTPCLTHDLLGCSCSVDGSAIVPAEEEQQVSD 1101
>gi|345793211|ref|XP_850491.2| PREDICTED: DNA repair and recombination protein RAD54B isoform 8
[Canis lupus familiaris]
Length = 744
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 272/598 (45%), Positives = 367/598 (61%), Gaps = 37/598 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P + H K V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 85 KPRHDPHAPNSLVMSRPD--NNHQWTFNKKGFPVVDVVIDPHLVYHLRPHQKEGIMFLYE 142
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP++ K +IV P SLV N
Sbjct: 143 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVVKKTLIVTPGSLVNN 202
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ P+D K E + R P +L+ISYE
Sbjct: 203 WRKEFQKWLGSERIKIFPVDQDHKVE----------EFTRSPFYSVLIISYEMLLRSLDQ 252
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + GL++CDEGHRLKN +T AL+ L ++RV+L+GTP+QNDL E+F+L+ FVN
Sbjct: 253 IKNVKFGLLICDEGHRLKNSAIKTTAALISLSCEKRVILTGTPVQNDLQEFFALIDFVNP 312
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS+ E+ +R +L + ++RRT +++KYL
Sbjct: 313 GILGSLSFYRKVYEEPIIISRQPSASEEEKKLGEKRAVELTCLTGLFILRRTQEVINKYL 372
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G LG + L I +LKKLCNHP
Sbjct: 373 PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQG----LLGNSPHLICIGALKKLCNHP 428
Query: 458 DLVMDKIQ-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ + DG +E +++ P A Y E S KL VL +L
Sbjct: 429 CLLFNSIKEKECSSTWDGKEEKSLYEALLDVFP----ADYNPLMFSEEESGKLQVLLKLL 484
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ +K+VLVSNYTQTLD+ + + K GY Y RLDG + +R ++V++FN K S
Sbjct: 485 AVIHELRPTEKVVLVSNYTQTLDILQEVCKRHGYTYTRLDGQTPVSQRQQIVDSFNSKYS 544
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 545 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKNPVHIYRLLTT 604
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
G+IEEK+ QRQ K+ LS VVD FS+ EL++LF L E++ THD + C
Sbjct: 605 GTIEEKIYQRQISKQDLSGAVVDLTRTSEHIQFSVEELKNLFTLHESSHCVTHDLLDC 662
>gi|320168818|gb|EFW45717.1| Rad54b protein [Capsaspora owczarzaki ATCC 30864]
Length = 988
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 274/604 (45%), Positives = 367/604 (60%), Gaps = 42/604 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPTA NALV+ P + H L V VVVDP LS LRPHQR+GV+F+YECVT
Sbjct: 278 HDPTAENALVMQRPSR--EHYKLHGKGVPHVVDVVVDPFLSVQLRPHQRDGVRFLYECVT 335
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP-LAKPLIDKAIIVAPSSLVKNWCN 222
G+R + +G I+ADEMGLGKTLQC+TL+WTLL+QGP + L+ +A++V PSSLVKNW
Sbjct: 336 GMRTDAGFGAILADEMGLGKTLQCVTLLWTLLKQGPYMGTALVKRALVVCPSSLVKNWQR 395
Query: 223 EITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP-------VNPILVISYETFRSH 275
E KWLG D++L +F + RP V P++++SYE R
Sbjct: 396 EFKKWLG----------------DHRLQTFAVSAENRPDAFLLQTVIPVMIVSYEMLRQE 439
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
V+ K +V CDEGHRLKN ++ QALM L +RR++L+GTPIQNDL E+FSL+ F
Sbjct: 440 IDVISKVPFDIVFCDEGHRLKNESAKISQALMSLSTRRRIILTGTPIQNDLQEFFSLLEF 499
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
N GI+GTA F++ YE PI+ + A+ E+ +R QL + + +RRTS +
Sbjct: 500 CNPGIVGTATTFKRIYENPIVASRQPEATQDEKLLGQQRASQLQQLTSLFCLRRTSDVNR 559
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN 455
+YLP K E VV + + LQ +Y +++S +R +++ L +ITSLKK+CN
Sbjct: 560 QYLPPKIEYVVFCEPSPLQLAIYRKVLQSAPLRSCF---DSSSRASQHLVAITSLKKICN 616
Query: 456 HPDLVMDKIQTGADG--FENAMNILPTGYAA----SYKSGKLLI----ELSAKLMVLDTM 505
P L+ + + F N +++ P ++ + SGK I L K+ L +
Sbjct: 617 SPALIHELAKNAEKDSLFANTIDLFPDDFSPDTFDAAHSGKQRIFWMWALRCKMAALAQI 676
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
L IK T D++V+VSNYTQTLD E+L + + RLDGS KR +VE FN K S
Sbjct: 677 LCTIKRDTTDRVVIVSNYTQTLDHLEKLCAAYEFSFARLDGSTPTAKRQPIVEAFNSKYS 736
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+++F+LSSKAGG GLNL+GA RL++ D DWNPAND QAMARVWRDGQ + +YR L T
Sbjct: 737 TDYVFLLSSKAGGVGLNLVGACRLILVDTDWNPANDLQAMARVWRDGQTRTVHLYRMLLT 796
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCE-EDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
GSI+EK+ QRQ K+ LS V E E A FS ELR LF L E+T+ DTHD + CS
Sbjct: 797 GSIDEKIYQRQLSKQGLSVAVSSNEGEASAVSFSQDELRDLFSLREDTLCDTHDLMSCS- 855
Query: 684 CVNG 687
C G
Sbjct: 856 CETG 859
>gi|281209483|gb|EFA83651.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 934
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 285/685 (41%), Positives = 406/685 (59%), Gaps = 47/685 (6%)
Query: 86 GYSTKALGV-RREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKI--QVHVVVDPV 142
G+ GV R + K LH+P APNA VLY P KD++ ++ VV+DP+
Sbjct: 248 GFVVPYKGVDRTKKLTKPLHNPYAPNAFVLYMP------------KDQLNGEIPVVMDPM 295
Query: 143 LSNILRPHQREGVKFMYECVTGVR-IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
L N LRPHQR G++FM++C+ G+ +D GCI+AD+MGLGKT+Q I++MWTLL+QG
Sbjct: 296 LGNKLRPHQRVGIQFMFDCLLGLGGFKDGNGCILADDMGLGKTIQAISIMWTLLKQGIRG 355
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
+P +AIIVAP+ LV NW E+ KWLG + ++ I G S KL
Sbjct: 356 EPTCQRAIIVAPTGLVGNWVKELKKWLGEGIKSIHI-GKSTPTGRAKLAQLETGDAD--- 411
Query: 262 NPILVISYETFRSHASVLHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+LVISY+ + + L K + +GLV+CDEGHRLKN E+++ QA+ L KRRV+LSGT
Sbjct: 412 --VLVISYDQLKIWINDLIKIDMIGLVICDEGHRLKNAETKSTQAVNMLPTKRRVILSGT 469
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
PIQN+L+E++++V+FVN G+L + F Y PIL + A+ E+ ER L
Sbjct: 470 PIQNNLMEFYAMVNFVNPGVLKSVPMFNNVYNGPILASRSPDATPEEKRVGRERSLMLTE 529
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKL 439
I + ++RRT+A+ ++YLP KTE V K++ LQK +Y L++ +KG G T
Sbjct: 530 ITGKFILRRTAAINTQYLPKKTEYTVFCKLSPLQKTIYLKLLE------IIKGRGYQTFT 583
Query: 440 GMTALSSITSLKKLCNHPDLVM-----DKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
G AL ITSLKKL N P+LV + + E+ +++ + + + +
Sbjct: 584 G--ALPLITSLKKLSNCPELVYTPPSAKEDDKEEEKAEDVSSVIHGLFPKEFNTKVSQPQ 641
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
S KL +DT++ I+ T D++V++SNYTQTL + RL RGY + +LDGS KR
Sbjct: 642 YSGKLQFIDTLMQQIRNKTKDRVVVISNYTQTLSVLARLCNERGYPFFQLDGSTPSDKRQ 701
Query: 555 KVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
+V+ FN S+ +F+F+LSSKAGG GLNLIGAN L++ DPDWNPAND QAMARVWR+GQK
Sbjct: 702 VLVDKFNDPSSPQFVFLLSSKAGGIGLNLIGANHLILVDPDWNPANDAQAMARVWREGQK 761
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTIS 673
K +YR LSTG+IEEK+ QRQ K ALS VV+ + D A F +L+ +F L ++T+
Sbjct: 762 KVVSIYRTLSTGTIEEKIYQRQITKMALSVSVVEGDSDNAPSFDTKDLKDIFNLRDDTLC 821
Query: 674 DTHDKI----KCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVS 729
DTHD + C VK + +L+ + H + + DPIL +
Sbjct: 822 DTHDMLGRICDCGAPARNKDVKSAERQGMAISELATYKHYHDMSKIPDPILSFAAKNNCT 881
Query: 730 FVFYQHSTKAEKSKVVTEEEEKEEE 754
F+F +K VV E ++KE+E
Sbjct: 882 FIFAN-----DKPPVVKERKKKEDE 901
>gi|219123447|ref|XP_002182036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406637|gb|EEC46576.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 545
Score = 487 bits (1254), Expect = e-135, Method: Compositional matrix adjust.
Identities = 260/557 (46%), Positives = 361/557 (64%), Gaps = 21/557 (3%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V V PVL+ LRPHQREGV+F+YECV G++ + +GCI+AD+MGLGKTLQ +TL+ TLL+
Sbjct: 1 VYVPPVLAKWLRPHQREGVQFIYECVMGLKDFNGHGCILADDMGLGKTLQSVTLIHTLLK 60
Query: 197 QGPLAK--PLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
G A P + I+V P SLVKNW NE KWLG G V L I + ++ L++F+
Sbjct: 61 TGITANGAPTAKRVIVVCPCSLVKNWENEFVKWLGPGVVKTLAIAEADRKTVERNLDTFV 120
Query: 254 QTYGRRPVNPILVISYETFRSHASVL--HKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+T + +++ SYE R+H L H + L++CDE HRLKN ++QT +AL L
Sbjct: 121 RT----KIFNVMIASYECIRTHVGRLSKHADCCDLLVCDEAHRLKNSDNQTSRALNSLPV 176
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RRVLL+GTP+QNDL E++++V F N GILGT +EFR++ PILRG++ ASDA++ K
Sbjct: 177 RRRVLLTGTPMQNDLQEFYAMVDFTNPGILGTPEEFRRKTLFPILRGREPDASDAQKHKM 236
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+ + IVN ++RR + L +++LP K QVVC +T++Q+ +Y +L+ S ++ +
Sbjct: 237 MQIQNDMSRIVNDFILRRVNTLNAQHLPPKLVQVVCCNLTEIQQNMYQHLVNSKDMQHVL 296
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP-TGYAASYKSGK 490
G + + LSSI L KL NHP L GADG + +P G
Sbjct: 297 DGKQ-----VNCLSSIQMLMKLANHPSLA-SMAAPGADGIAKFLPYVPGEGGGRRGDFAP 350
Query: 491 LLIELSAKLMVLDTMLAVIKM--TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
+ E S K+ VL ++ ++ +DKIV+VSNYTQTLDL R+ + + + RLDGS+
Sbjct: 351 VRPEWSGKMFVLYRLMKEMRKPGNGNDKIVIVSNYTQTLDLIGRMCRENSWGFCRLDGSI 410
Query: 549 TIKKRAKVVETFNKTSNEFI-FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
T+KKR K+ + FN ++ + F+LSSKAGGCGLNLIG NRLV+FDPDWNPA D QA AR
Sbjct: 411 TMKKRQKMCDEFNDPNSPLVAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARC 470
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WRDGQKK CF YRFL+TG++EEK+ QRQ K+ L S V D E+ S +L++LF+L
Sbjct: 471 WRDGQKKRCFTYRFLATGTVEEKIFQRQLSKEGLQSVVDDKEQ--TNQLSTKDLKNLFKL 528
Query: 668 EENTISDTHDKIKCSRC 684
T SDTHDK++C RC
Sbjct: 529 RTGTPSDTHDKLRCERC 545
>gi|399218088|emb|CCF74975.1| unnamed protein product [Babesia microti strain RI]
Length = 833
Score = 487 bits (1253), Expect = e-134, Method: Compositional matrix adjust.
Identities = 286/693 (41%), Positives = 395/693 (56%), Gaps = 66/693 (9%)
Query: 73 KPFKVPILNYTGGGYSTKALGVRREGARKALH---------------------------D 105
KPFK P+ + G LG E RK L D
Sbjct: 58 KPFKSPLQGHVPGT-KINNLGSSAESQRKTLGCKIKSLNNYSCRQFIKSSRSNLEIDDVD 116
Query: 106 PTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
+ + LVLYTP S KI VVVDP+LS LR HQREGV+F+++C++G+
Sbjct: 117 YSDVDPLVLYTPSPES----------KILKPVVVDPMLSKHLRDHQREGVQFVFDCLSGL 166
Query: 166 RIEDAYGCIMADEMG-------LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVK 218
+ D GCI+AD+MG LGKTLQ IT+MWTLL QG KP K I+ P++LV
Sbjct: 167 KKFDGQGCILADDMGQLQHNLGLGKTLQSITVMWTLLNQGITGKPAARKCAIICPATLVS 226
Query: 219 NWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
NW +EI KWL GR + S+ ++ +K F Y R +++ SYETFR H
Sbjct: 227 NWESEIAKWLKGRCPCTAVSDNSREKVVSKFQGFKYDYKSR----VIISSYETFRLHVDK 282
Query: 279 LHKNEVGLVLCDEGHR-------LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
L + +++CDE HR LKN ++Q+ + ++ + AK R+LLSGTPIQNDL E+++
Sbjct: 283 LEGVPIDIIICDEAHRMYLFYIGLKNDKAQSTKCIINIPAKMRLLLSGTPIQNDLNEFYA 342
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
LV N LG FRK Y PI+ G+ S S E A RL++L I N+ ++RRT+
Sbjct: 343 LVSICNPNALGDINYFRKTYANPIVNGRSSDISSKEYKLAELRLKELSDITNQFVLRRTN 402
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
ALLSK LP K V MT +Q+ +Y + + + ++K+ L +I L
Sbjct: 403 ALLSKLLPPKITMNVFCNMTPIQQTMYDLFTTT----KILYKKTDSKIPNKGLLAIKGLM 458
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
LCNHP L+ D + G DG + + L YA++ +S + +LS KL +L +L IK
Sbjct: 459 ALCNHPFLISDPSKLGIDGLNDMIQEL--KYASNGRSKNIRYDLSGKLYLLYCLLHEIKW 516
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFM 570
TDDK+V+VS YTQTL L +RL + Y Y LDGS+ KKR +V FN S+ F+F+
Sbjct: 517 NTDDKVVIVSYYTQTLSLIKRLCRECNYTYTCLDGSVPPKKRHALVTKFNDPFSDIFVFL 576
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGG G+NLIGANRL+MFDPDWNPA D QA+AR+WRDGQ+K ++YR G+IEEK
Sbjct: 577 LSSKAGGAGVNLIGANRLIMFDPDWNPAFDYQALARIWRDGQRKVSYIYRLFCNGTIEEK 636
Query: 631 MMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
++QRQ K +LSS +V D + ++ SM +LR +F L+ NT+S+THD I C C +
Sbjct: 637 ILQRQLSKGSLSSMLVTDGQNEIVEGLSMEDLRDIFTLKTNTLSNTHDTIGCKNCTDK-S 695
Query: 690 VKPPPLESDCTDDLSCWHHVTEKRWLVDPILKH 722
K ++ D DL+ W H ++ L D IL++
Sbjct: 696 YKAQDVDFD-EKDLNTWAHHSDIETLPDEILRN 727
>gi|71662508|ref|XP_818260.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70883500|gb|EAN96409.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1045
Score = 486 bits (1252), Expect = e-134, Method: Compositional matrix adjust.
Identities = 278/653 (42%), Positives = 387/653 (59%), Gaps = 55/653 (8%)
Query: 53 LPMTKEEMSEHENLIRQILAKP------------FKVPILNYTGGGYSTKALGVRREGAR 100
L + K +MS ++L I A+P F VP+ G T G+R E
Sbjct: 268 LHVIKPKMSFGQSLSGCIFAQPVFRKRPRDGQTGFTVPV----AGRPKTGPSGIRAE--L 321
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K LHDP A+VL+ D + ++QV VVVDPV+ + LRPHQR GV+F+++
Sbjct: 322 KPLHDPDREGAVVLFRA------DYKRDANGRLQVSVVVDPVIGDKLRPHQRAGVRFLFD 375
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+TG R+ +G I+ADEMGLGKT+Q + ++T LRQG P K ++V PSSLVKNW
Sbjct: 376 CITGERMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNW 435
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH-ASV 278
CNE KWLG G V I S + D ++ F +LVISY+ R + A +
Sbjct: 436 CNEFDKWLGEGAVKYFSISE-STPKGDRIISRFDGE------GDVLVISYDQLRKYIARI 488
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V FVN
Sbjct: 489 STLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNP 548
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ F + +E P+++G+D + R+ ++R L + R ++RRT ++ YL
Sbjct: 549 GILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYL 608
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + V +++ +LQ Y L SD V + L I++L+KLCNH D
Sbjct: 609 PPKVDVTVFVRLGELQSVAYEKL--SDLVESS---------SCPPLVLISALRKLCNHMD 657
Query: 459 LVMDKIQTGA-----DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
L + + + +G ++LP GY KSG L K+ + ML ++
Sbjct: 658 LFYEAVLNSSKEEVREGRGLPKSVLPKGY----KSGTLSEAAGGKMHFVSLMLDELRNNG 713
Query: 514 D-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFML 571
D DK+V+VSN+TQTLD+ + + + + +LDGSM +K+R +VV+ FN S E +F+L
Sbjct: 714 DRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLL 773
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK F+YR LS GSIEEK+
Sbjct: 774 SSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKI 833
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
QRQ K+ LS+ VVD + D +HF++ ELRSLF ++T SDTHD + C+ C
Sbjct: 834 YQRQVSKQGLSANVVDMKSDSKQHFTLEELRSLFCYRKDTRSDTHDLLHCTNC 886
>gi|395512148|ref|XP_003760306.1| PREDICTED: DNA repair and recombination protein RAD54B [Sarcophilus
harrisii]
Length = 912
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 293/705 (41%), Positives = 407/705 (57%), Gaps = 53/705 (7%)
Query: 69 QILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKI 128
QI KPF P+ + +TK V K HDP A N+ V+ P + +H +
Sbjct: 224 QITRKPFSNPV--KSSCKSNTKEKIVDDSPNFKPRHDPYAQNSFVMPRPDK--SHQWIFN 279
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
V VVVDP L + LRPHQ+EG+ F+YECV G+R+ +G I+ADEMGLGKTLQCI
Sbjct: 280 KNCLPLVDVVVDPYLVHHLRPHQKEGIVFLYECVMGMRMNGRFGAILADEMGLGKTLQCI 339
Query: 189 TLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEID 246
+L+WTLLRQG KP+I K +IV P SLV NW E KWLG R+ +D D
Sbjct: 340 SLVWTLLRQGLYGGKPIIKKTLIVTPGSLVTNWKKEFQKWLGSERIKVFTVDQ------D 393
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+K+ F+ + P+ +LVISYE + + L++CDEGHRLKN +T AL
Sbjct: 394 HKIEDFVNS----PLYSVLVISYEMLLRCLDQIKNIKFDLLICDEGHRLKNSSIKTTTAL 449
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
+GL ++RV+L+GTPIQNDL E+++L+ FVN GILG+ +RK YE PI+ ++ A++
Sbjct: 450 VGLSCEKRVILTGTPIQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIASREPSATEE 509
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E+ +R +L + ++RRT +++KYLP K E VV + LQ ELY L+ S A
Sbjct: 510 EKKLGEKRAAELTRLTGLFILRRTQEVINKYLPPKIENVVFCRPGRLQIELYRKLLDSQA 569
Query: 427 VRRTMKGG-ENTKLGMTALSSITSLKKLCNHPDLVMDKIQ-----TGADGFE--NAMNIL 478
VR ++G EN+ L I +LKKLCNHP L+ ++ + +D +E N L
Sbjct: 570 VRFCLQGVLENS----PHLICIGALKKLCNHPCLLFKSLKEKECNSSSDEYEEYNFSESL 625
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKLR 537
Y A Y S KL VL +LAVI +++ +K+VLVSNYTQTL++ + + K
Sbjct: 626 IDAYPADYNPLTFSETDSGKLHVLTKLLAVIHELSPSEKVVLVSNYTQTLNILQEVCKRH 685
Query: 538 GYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY RLDG + +R ++V+ FN K S++F+F+LSSKAGG GLNLIG + L+++D DWN
Sbjct: 686 GYNCSRLDGQTPVVQRQQIVDGFNSKHSSDFVFLLSSKAGGVGLNLIGGSHLILYDIDWN 745
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-H 655
PA D QAMARVWRDGQK +YR L+TG+IEEK+ QRQ K+ LS VVD +
Sbjct: 746 PATDIQAMARVWRDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLSKTSEHIQ 805
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCS---------------RCVNGIQVKPPPLESDCT 700
FS+ EL++LF L E++ THD + C Q+ P L+ D
Sbjct: 806 FSVEELKNLFTLHEDSDCVTHDLLDCECMGRKDHQAKPLEEVHTYRKCQLGPNHLKPDSK 865
Query: 701 DDLSC-----WHHVTEK-RWLVDPILKHCWGAGVSFVFYQHSTKA 739
LS W H + K + + DP L+ VSF+F + +A
Sbjct: 866 KPLSMSQLKQWKHFSGKYQNINDPFLERI-KENVSFIFQNITNQA 909
>gi|300794189|ref|NP_001179884.1| DNA repair and recombination protein RAD54B [Bos taurus]
gi|296480441|tpg|DAA22556.1| TPA: RAD54 homolog B [Bos taurus]
Length = 909
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 284/670 (42%), Positives = 384/670 (57%), Gaps = 60/670 (8%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P + H L V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYAPNSLVMLRPDK--NHQWLFNKNCFPVVDVVIDPHLVYYLRPHQKEGITFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP++ K +IV P SLV N
Sbjct: 310 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D K E + + P +L+ISYE
Sbjct: 370 WKKEFQKWLGIERIKIFTVDQDHKVE----------EFTKSPFYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNVKFDLLICDEGHRLKNSTIKTTTALISLSCEKRIILTGTPVQNDLQEFFTLIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS+ ER +R +L + ++RRT ++++YL
Sbjct: 480 GILGSLSAYRKIYEEPIIISRQPSASEEERELGEQRAAELTCLTGLFILRRTQEVINQYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ LY L+ S AVR ++G ENT + L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIALYRKLLNSQAVRFCLQGLLENT----SHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ I+ +E MN+ P A Y E S KL VL +L
Sbjct: 596 CLLFGSIKEKESNSTWDESEERNLYEGLMNVFP----ADYNPIMFTEEESGKLQVLSKLL 651
Query: 507 AVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI+ + +K+VLVSNYT+TLD+ + + K GY Y RLDG I +R ++V+ FN K S
Sbjct: 652 AVIRELRPAEKVVLVSNYTRTLDILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSKYS 711
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 712 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 771
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 772 GTIEEKIYQRQISKQGLSGAVVDLSKTSDHIQFSVEELKNLFTLHESSHCVTHDLLDC-E 830
Query: 684 CV----NGIQVKPPPLESDC--------TDDLSCWHHVTEKRW---------LVDPILKH 722
C G ++ P+ +C +D L K+W L DP L+
Sbjct: 831 CTGENHTGDSLEKLPVSRNCQLGPHQQKSDSLKPLSMSQLKQWRHFPGDHLNLTDPFLER 890
Query: 723 CWGAGVSFVF 732
VSF F
Sbjct: 891 I-RENVSFFF 899
>gi|407860358|gb|EKG07368.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1044
Score = 485 bits (1249), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/653 (42%), Positives = 387/653 (59%), Gaps = 55/653 (8%)
Query: 53 LPMTKEEMSEHENLIRQILAKP------------FKVPILNYTGGGYSTKALGVRREGAR 100
L + K +MS ++L I A+P F VP+ G T G+R E
Sbjct: 268 LHIIKPKMSFGQSLSGCIFAQPVFRKRPRDGQTGFTVPV----AGRPKTGPSGIRAE--L 321
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K LHDP A+VL+ D + ++QV VVVDP++ + LRPHQR GV+F+++
Sbjct: 322 KPLHDPDREGAVVLFRA------DYKRDANGRLQVSVVVDPIIGDKLRPHQRAGVQFLFD 375
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+TG R+ +G I+ADEMGLGKT+Q + ++T LRQG P K ++V PSSLVKNW
Sbjct: 376 CITGERMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNW 435
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
CNE KWLG G V I S + D ++ F +LVISY+ R + + +
Sbjct: 436 CNEFDKWLGEGAVKYFSISE-STPKGDRIISRFDGE------GDVLVISYDQLRKYITRI 488
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V FVN
Sbjct: 489 STLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNP 548
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ F + +E P+++G+D + R+ ++R L + R ++RRT ++ YL
Sbjct: 549 GILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYL 608
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + V +++ +LQ Y L SD V + L I++L+KLCNH D
Sbjct: 609 PPKVDVTVFVRLGELQSVAYEKL--SDLVESS---------SCPPLVLISALRKLCNHMD 657
Query: 459 LVMDKIQTGA-----DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
L + + + +G ++LP GY KSG L K+ + ML ++
Sbjct: 658 LFYEAVLNSSKEEVGEGRGIPKSVLPKGY----KSGTLSEAAGGKMHFVSLMLDELRNNG 713
Query: 514 D-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFML 571
D DK+V+VSN+TQTLD+ + + + + +LDGSM +K+R +VV+ FN S E +F+L
Sbjct: 714 DRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLL 773
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK F+YR LS GSIEEK+
Sbjct: 774 SSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKI 833
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
QRQ K+ LS+ VVD + D +HF++ ELRSLF ++T SDTHD + C+ C
Sbjct: 834 YQRQVSKQGLSANVVDMKSDSKQHFTLEELRSLFCYRKDTRSDTHDLLHCTNC 886
>gi|71651467|ref|XP_814411.1| DNA repair and recombination protein RAD54 [Trypanosoma cruzi
strain CL Brener]
gi|70879380|gb|EAN92560.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi]
Length = 1047
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 276/653 (42%), Positives = 387/653 (59%), Gaps = 55/653 (8%)
Query: 53 LPMTKEEMSEHENLIRQILAKP------------FKVPILNYTGGGYSTKALGVRREGAR 100
L + K +MS ++L I A+P F VP+ G T G+R E
Sbjct: 268 LHVIKPKMSFGQSLSGCIFAQPVFRKRPRDGQTGFTVPV----AGRPKTGPSGIRAE--L 321
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K LHDP A+VL+ D + ++QV VVVDP++ + LRPHQR GV+F+++
Sbjct: 322 KPLHDPDREGAVVLFRA------DYKRDANGRLQVSVVVDPIIGDKLRPHQRAGVQFLFD 375
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+TG R+ +G I+ADEMGLGKT+Q + ++T LRQG P K ++V PSSLVKNW
Sbjct: 376 CITGERMPGYHGAILADEMGLGKTIQTVATIYTCLRQGKHGVPTARKCLVVTPSSLVKNW 435
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
CNE KWLG G V I S + D ++ F +LVISY+ R + + +
Sbjct: 436 CNEFDKWLGEGAVKYFSISE-STPKGDRIISRFDGE------GDVLVISYDQLRKYITRI 488
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V FVN
Sbjct: 489 STLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNP 548
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ F + +E P+++G+D + R+ ++R L + R ++RRT ++ YL
Sbjct: 549 GILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGSDRAHYLSNLTQRFILRRTQSINESYL 608
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + V +++ +LQ Y L SD V + L I++L+KLCNH D
Sbjct: 609 PPKVDVTVFVRLGELQSVAYEKL--SDLVEGS---------SCPPLVLISALRKLCNHMD 657
Query: 459 LVMDKIQTGA-----DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
L + + + +G ++LP GY KSG L K+ + ML ++
Sbjct: 658 LFYEAVLNSSKEEVREGHGIPKSVLPKGY----KSGTLSEAAGGKMHFVSLMLDELRNNG 713
Query: 514 D-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFML 571
D DK+V+VSN+TQTLD+ + + + + +LDGSM +K+R +VV+ FN S E +F+L
Sbjct: 714 DRDKLVIVSNFTQTLDVIANMCRQKRISFFQLDGSMPVKRRQEVVDRFNVPESQEIVFLL 773
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK F+YR LS GSIEEK+
Sbjct: 774 SSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSAGSIEEKI 833
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
QRQ K+ LS+ VVD + D +HF++ ELRSLF ++T SDTHD + C+ C
Sbjct: 834 YQRQVSKQGLSANVVDMKSDSKQHFTLEELRSLFCYRKDTRSDTHDLLHCTNC 886
>gi|224046507|ref|XP_002200063.1| PREDICTED: DNA repair and recombination protein RAD54B [Taeniopygia
guttata]
Length = 919
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 286/706 (40%), Positives = 407/706 (57%), Gaps = 65/706 (9%)
Query: 67 IRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLL 126
+ Q KPF P N S K +R + K HDP A NA+V+ P+ +A
Sbjct: 226 LSQTNTKPFCKPFKNVCQP--SPKENTLRYSQSCKPRHDPNATNAVVM---PRPNASLQW 280
Query: 127 KIDKDKIQVHVVVDP-VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTL 185
+K + V VV ++N LRPHQ+EG+ F+YECV G+R+ +G I+ADEMGLGKTL
Sbjct: 281 MFNKAGLPVVDVVVDPYIANNLRPHQKEGIIFLYECVMGMRVSGRFGAILADEMGLGKTL 340
Query: 186 QCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKA 243
QCI L+WTLLRQGP KP++ +A++V P SLVKNW E KWLG R+ +D
Sbjct: 341 QCIALVWTLLRQGPYGCKPVLKRALVVTPGSLVKNWKKEFQKWLGNERIKVFAVDQ---- 396
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
D+K+ F+ + P+ +++ISYE + + E L++CDEGHRLKN +T
Sbjct: 397 --DHKVEEFISS----PLYSVMIISYEMLLRSSDQIEAVEFNLLICDEGHRLKNSTIKTT 450
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
AL L +RR++L+GTPIQNDL E+++L+ FVN GILG+ +RK YE PI+R ++ A
Sbjct: 451 TALTSLSCERRIILTGTPIQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIVRSREPSA 510
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
++ E+ +R +L + ++RRT +++K+LP K E ++ + T LQ ELY L+
Sbjct: 511 TEEEKELGEKRAAELTRLTGLFILRRTQEVINKFLPPKKESIIFCRPTALQLELYRKLLG 570
Query: 424 SDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG-----------ADGF 471
S + ++G EN+ L I +LKKLCNHP L+ I+ + +
Sbjct: 571 SRVITSCLQGRLENSP----HLICIGALKKLCNHPCLLFKAIKEKSCDPMSEEYDESSLY 626
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLF 530
E +++ P Y S S KL VL +LA I ++ + +++VLVSNYTQTL++
Sbjct: 627 EGVIDVFPQDYT----SDTFCETDSGKLQVLVKLLAAIHELNSSERVVLVSNYTQTLNVL 682
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLV 589
+ + K GY Y RLDG + +R +V+TFN K S FIF+LSSKAGG GLNL+GA+ L+
Sbjct: 683 QDVCKHYGYSYTRLDGHTPVSQRQHIVDTFNSKFSPAFIFLLSSKAGGVGLNLVGASHLI 742
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
++D DWNPA D QAMARVWRDGQK +YR L+TGSIEEK+ QRQ K+ LS VVD
Sbjct: 743 LYDIDWNPATDIQAMARVWRDGQKHSVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLS 802
Query: 650 EDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI-----QVKPPPLESDC---- 699
+ HFS+ EL++LF L E++ THD ++C C+ + + PPL C
Sbjct: 803 KTSEHTHFSIEELKNLFTLHEDSSCVTHDLLECD-CMGKVDHQNTSSEKPPLSRSCQLEQ 861
Query: 700 ------------TDDLSCWHHVT-EKRWLVDPILKHCWGAGVSFVF 732
L W H + + + L DP L+ VSF+F
Sbjct: 862 NHGKPNSKKPLSMSQLMQWKHFSGQHQPLADPFLERI-KENVSFIF 906
>gi|147834946|emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 484 bits (1245), Expect = e-134, Method: Compositional matrix adjust.
Identities = 281/690 (40%), Positives = 393/690 (56%), Gaps = 103/690 (14%)
Query: 106 PTAPNALVLYTPPQL--SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
P + LVL+ P + A +L+ I VVDP+L LRPHQREGV+FM++CV+
Sbjct: 148 PAGIDPLVLWHPEESEEQADNLMPI---------VVDPLLVRFLRPHQREGVQFMFDCVS 198
Query: 164 GVR-IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G+ + GCI+AD+MGLGKTLQ ITL++TLL QG KP++ KAIIV P+SLV NW
Sbjct: 199 GLSSTVNISGCILADDMGLGKTLQSITLLYTLLHQGFDGKPMVKKAIIVTPTSLVSNWEA 258
Query: 223 EITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL-HK 281
EI KW+G RV + + ++ ++ ++SF + P+ +L++SYETFR H+S H
Sbjct: 259 EIKKWVGERVQLVALCESTRDDVVFGIDSFTSPHS--PLQ-VLIVSYETFRMHSSKFSHS 315
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+F++V+F N GIL
Sbjct: 316 GSCDLLICDEAHRLKNDQTLTNRALAALACKRRILLSGTPMQNDLEEFFAMVNFTNPGIL 375
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G A FR+ YETPI+ G++ A++ E+ ER +L VN+ ++RRT+ALLS +LP K
Sbjct: 376 GDATYFRRYYETPIICGREPTAAEEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPK 435
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHPDLV 460
+VVC +++ LQ ELY + I S V++ + N ++ + L+ IT+LKKLCNHP L+
Sbjct: 436 IVEVVCCRLSPLQSELYNHFIHSKNVKKVI----NEEMKQSKILAYITALKKLCNHPKLI 491
Query: 461 MDKIQT---GADGFENAMNILPTGY-----------AASYKSGK-LLIELSAKLMVLDTM 505
D +++ G GFE+ M P + ++ G+ + +ELS K+ VL +
Sbjct: 492 YDTVKSGNPGTSGFEDCMRFFPPEMFSGRLLFLCVRSGAWTGGEGIWVELSGKMHVLARL 551
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-S 564
LA ++ TDD+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V FN
Sbjct: 552 LAHLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFNDPLK 611
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+EF+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND Q R
Sbjct: 612 DEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQVFQR------------------ 653
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
M ++ +K + D + S +LR LF EN S+ H+K+ C+RC
Sbjct: 654 ------QMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCNRC 707
Query: 685 VN------------GIQVKPPPLES---DCTD---------------------------D 702
N G + K +S DC D D
Sbjct: 708 QNYDERPESVREEDGFKSKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTPLEED 767
Query: 703 LSCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
L W H + D I + G V+FVF
Sbjct: 768 LGSWGHHFFSTSVPDAIFQASAGDEVTFVF 797
>gi|71755407|ref|XP_828618.1| DNA repair/recombination protein RAD54 [Trypanosoma brucei TREU927]
gi|70834004|gb|EAN79506.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1037
Score = 484 bits (1245), Expect = e-133, Method: Compositional matrix adjust.
Identities = 281/649 (43%), Positives = 385/649 (59%), Gaps = 59/649 (9%)
Query: 59 EMSEHENLIRQILAKP------------FKVPILNYTGGGYSTKALGVRREGARKALHDP 106
+M+ E L+ + A P F VPI G T +G K+LHDP
Sbjct: 276 KMTLGETLLGNMFASPIFRKRPREGQTGFVVPIAGRVKPG--TSGIGAEL----KSLHDP 329
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKD-KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
A+VL+ H K D + ++QV VVVDP++ + LRPHQR GVKF+++C+TG
Sbjct: 330 DREGAVVLF-------HAHYKRDVNGRLQVSVVVDPIIGDKLRPHQRIGVKFLFDCITGQ 382
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
R+ +G I+ADEMGLGKT+Q + ++T L+QG P K +IV PSSLVKNWCNE
Sbjct: 383 RMPGYHGAILADEMGLGKTIQTVATVYTCLKQGRYGVPTARKCLIVTPSSLVKNWCNEFD 442
Query: 226 KWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-NE 283
KWLG G V L I S + D ++ F +LVISY+ R + S +
Sbjct: 443 KWLGVGAVKYLSISE-STPKGDRIISRFDGD------GDVLVISYDQLRKYISRISTLKS 495
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
V LV+CDEGH+LKN E +T +A+ L + R++LSGTPIQNDL E+ ++V FVN GILGT
Sbjct: 496 VELVVCDEGHKLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGT 555
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
F + +E P+ G+D + R +R L + R ++RRT ++ YLP K +
Sbjct: 556 RDVFGRVFEEPVTLGRDPDCPEHLRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVD 615
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
V +++ + Q+E Y K A+ + + T L I+SL+KLCNH DL +
Sbjct: 616 LTVFVRLGEKQREAYE---KISAIVESSQ--------CTPLVLISSLRKLCNHMDLFHEA 664
Query: 464 I------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD-DK 516
+ Q G G ++LP GY K G L E+ +K+ + ML + D DK
Sbjct: 665 VVSSNGDQKGKGG-GIPKSVLPKGY----KVGTLSQEVGSKMQFVSLMLDELCSNGDHDK 719
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKA 575
+V+VSN+TQTLD+ + K + + +LDGSM IK+R +VV+ FN S E +F+LSSKA
Sbjct: 720 LVIVSNFTQTLDVIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKA 779
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK F+YR LSTGSIEEK+ QRQ
Sbjct: 780 GGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQ 839
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
K+ LS+ VVD + D +HF++ ELRSLF+ +T S+THD + C+ C
Sbjct: 840 VSKQGLSANVVDMQTDSKQHFTLEELRSLFRFRSDTDSETHDLLHCTSC 888
>gi|261334500|emb|CBH17494.1| DNA repair and recombination protein RAD54,putative [Trypanosoma
brucei gambiense DAL972]
Length = 1037
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 281/649 (43%), Positives = 385/649 (59%), Gaps = 59/649 (9%)
Query: 59 EMSEHENLIRQILAKP------------FKVPILNYTGGGYSTKALGVRREGARKALHDP 106
+M+ E L+ + A P F VPI G T +G K+LHDP
Sbjct: 276 KMTLGETLLGNMFASPIFRKRPREGQTGFVVPIAGRVKPG--TSGIGAEL----KSLHDP 329
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKD-KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
A+VL+ H K D + ++QV VVVDP++ + LRPHQR GVKF+++C+TG
Sbjct: 330 DREGAVVLF-------HAHYKRDVNGRLQVSVVVDPIIGDKLRPHQRIGVKFLFDCITGQ 382
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEIT 225
R+ +G I+ADEMGLGKT+Q + ++T L+QG P K +IV PSSLVKNWCNE
Sbjct: 383 RMPGYHGAILADEMGLGKTIQTVATVYTCLKQGRYGVPTARKCLIVTPSSLVKNWCNEFD 442
Query: 226 KWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-NE 283
KWLG G V L I S + D ++ F +LVISY+ R + S +
Sbjct: 443 KWLGVGAVKYLSISE-STPKGDRIISRFDGD------GDVLVISYDQLRKYISRISTLKS 495
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
V LV+CDEGH+LKN E +T +A+ L + R++LSGTPIQNDL E+ ++V FVN GILGT
Sbjct: 496 VELVVCDEGHKLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVNPGILGT 555
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
F + +E P+ G+D + R +R L + R ++RRT ++ YLP K +
Sbjct: 556 RDVFGRVFEEPVTLGRDPDCPEHLRMLGADRAHYLSTLTQRFILRRTQSINESYLPPKVD 615
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
V +++ + Q+E Y K A+ + + T L I+SL+KLCNH DL +
Sbjct: 616 LTVFVRLGEKQREAYE---KISAIVESSQ--------CTPLVLISSLRKLCNHMDLFHEA 664
Query: 464 I------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD-DK 516
+ Q G G ++LP GY K G L E+ +K+ + ML + D DK
Sbjct: 665 VVSSNGDQKGKGG-GIPKSVLPKGY----KVGTLSQEVGSKMQFVSLMLDELCSNGDHDK 719
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKA 575
+V+VSN+TQTLD+ + K + + +LDGSM IK+R +VV+ FN S E +F+LSSKA
Sbjct: 720 LVIVSNFTQTLDVIAAMCKTKKISFFQLDGSMPIKRRQEVVDRFNVPNSQEIVFLLSSKA 779
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK F+YR LSTGSIEEK+ QRQ
Sbjct: 780 GGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIYQRQ 839
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
K+ LS+ VVD + D +HF++ ELRSLF+ +T S+THD + C+ C
Sbjct: 840 VSKQGLSANVVDMQTDSKQHFTLEELRSLFRFRSDTDSETHDLLHCTSC 888
>gi|115921268|ref|XP_787494.2| PREDICTED: DNA repair and recombination protein RAD54B, partial
[Strongylocentrotus purpuratus]
Length = 629
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/589 (44%), Positives = 360/589 (61%), Gaps = 38/589 (6%)
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
A K L+DPT P+ALV+ PP S+H ++ V VVVDP L + LRPHQ++GV F+
Sbjct: 6 AAKPLYDPTHPDALVMPRPP--SSHQWQNNQRNDSIVDVVVDPHLVSKLRPHQQKGVIFL 63
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLV 217
YEC+ G+R + G I+ADEMGLGKTLQCITL+WTL +QGP KP+I + +IV P SLV
Sbjct: 64 YECIMGLRQYEGCGAILADEMGLGKTLQCITLVWTLFKQGPYGGKPIIKRVLIVTPGSLV 123
Query: 218 KNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
KNWC E KWLG R++ P+ K E + + P+ P++VISYE +A
Sbjct: 124 KNWCREFRKWLGSERISVFPVSSDKKVE----------EFKKSPLFPVMVISYEMMVRYA 173
Query: 277 SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
+ LV+CDEGHRLKN +T L L +RR+LL+GTPIQNDL E++S+V F
Sbjct: 174 DDIRGITFDLVVCDEGHRLKNSTIKTASLLSSLAVRRRILLTGTPIQNDLQEFYSIVEFC 233
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N G+LGT+ F + YE PILR A+ E+T R +L + + ++RRT + +K
Sbjct: 234 NPGVLGTSGSFHRVYEEPILRSNQPSATKEEKTLGAARATELSRLTSLFVLRRTQEINNK 293
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG--ENTKLGMTALSSITSLKKLC 454
YLP K E VV K + LQ LY +L++S +R + G + G L I +LKKLC
Sbjct: 294 YLPPKVETVVFCKPSALQLRLYQHLLRSPLIRSCLSRGYASSASAGSPHLVCIGALKKLC 353
Query: 455 NHPDLVMDKIQTGAD-----GFENAM------------NILPTGYAASYKSGKLLIELSA 497
N P L+ + + G E+ + +LP Y Y G+ L+
Sbjct: 354 NDPSLLYQASRKADEEGKRRGGESWLLDHDDEEESLYKGLLPI-YPPEYTEGRPLLAHCG 412
Query: 498 KLMVLDTMLAVIKM--TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
KL VL ML + T +++VLVSNYTQTLD+ + L + GY++ RLDGS KR
Sbjct: 413 KLCVLSEMLRAMHADPTRRERLVLVSNYTQTLDILQALCSIEGYQFCRLDGSTPTAKRQS 472
Query: 556 VVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
+VE FN + + E IF+LSSKAGG GLNLIGA+RL+++D DWNPAND QAMARVWRDGQKK
Sbjct: 473 IVEHFNSSYAKETIFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKK 532
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE-EDVARHFSMSELR 662
++YR ++ G+IEEK+ QRQ K++LS VVD + + + FS+ +LR
Sbjct: 533 TVYIYRLITAGTIEEKIYQRQISKQSLSGAVVDAKGQSGSVKFSLEDLR 581
>gi|66811190|ref|XP_639303.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60467929|gb|EAL65942.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 931
Score = 483 bits (1242), Expect = e-133, Method: Compositional matrix adjust.
Identities = 269/651 (41%), Positives = 393/651 (60%), Gaps = 38/651 (5%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K LH+P APN+LVL+TP ++ + ++H VVDP+LS LRPHQREGV+FM++
Sbjct: 246 KPLHNPLAPNSLVLFTPVDITGEN---------RIHCVVDPILSQKLRPHQREGVQFMFD 296
Query: 161 CVTGVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKN 219
C+ G R GCI+AD+MGLGK++Q IT++WTLL+QGP + KA+IVAP +LV N
Sbjct: 297 CLLGFRGGFKGNGCILADDMGLGKSIQAITILWTLLKQGPKGESTAKKAVIVAPCTLVGN 356
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
W E+ KWLG V + I G S KL +G+ V L+ISY+ R + +
Sbjct: 357 WGQELKKWLGDGVNTVAI-GESTKTGRAKLTEL--EFGKADV---LIISYDQLRIYCEDI 410
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
K +GLV+CDEGHRLKN E +T +A+ + RRV+LSGTPIQNDL E++++V+FVN
Sbjct: 411 CKITSIGLVICDEGHRLKNAEIKTTKAVSMIPTARRVILSGTPIQNDLTEFYAMVNFVNP 470
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+L F+ Y+ PI+ ++ ASD E+ +R +L + ++ ++RRT+ + ++YL
Sbjct: 471 GVLKNVATFKNVYDAPIVASRNPDASDEEKEIGRQRSLELSRLTSQFILRRTAFVNTQYL 530
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKS--DAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
P K E V+ K+T LQ +Y +LIK D+ + G AL IT+LKKL N
Sbjct: 531 PPKVEYVIFCKLTPLQLSIYKHLIKEAKDSAFASTTG---------ALPLITTLKKLSNC 581
Query: 457 PDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT-TDD 515
+LV + D + + + P + + S+KL+ +D +LA I+ + + D
Sbjct: 582 AELVYTPDKE-TDVGTSILKLFPKEWNPKV----FQPQYSSKLLFVDRLLANIRNSKSGD 636
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSK 574
K V++SNYTQTL++ + K RGY Y +LDGS KR ++V +N + EF+F+LSSK
Sbjct: 637 KTVIISNYTQTLEVLATMCKTRGYAYFQLDGSTANAKRQQLVNLYNDPARPEFVFLLSSK 696
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNLIG N LV+FD DWNPAND Q+MARVWR+GQKK +YR +TG+IEEK+ QR
Sbjct: 697 AGGVGLNLIGGNHLVLFDADWNPANDAQSMARVWREGQKKIVSIYRTFTTGTIEEKIFQR 756
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
Q K+ALS+ + + + D + F +L+ +F L E+T+ DTHD + C +C + K P
Sbjct: 757 QLTKQALSTSITEGDSDNSPSFDSKDLKDIFTLREDTLCDTHDMLSC-KCAPTVGGKIPK 815
Query: 695 LESD--CTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKSK 743
+ D +L+ WHH + + D + +FVF +K+K
Sbjct: 816 HKRDTMSISELNSWHHFHQMEKIKDQKVASACQDIATFVFVNDKGPVDKNK 866
>gi|428179712|gb|EKX48582.1| hypothetical protein GUITHDRAFT_68686, partial [Guillardia theta
CCMP2712]
Length = 524
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 253/498 (50%), Positives = 340/498 (68%), Gaps = 20/498 (4%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
LR HQR+GV+FM+ECVTG+R YGC++AD+MGLGKT Q +TL+WTLL QG KP I
Sbjct: 2 FLREHQRQGVQFMFECVTGLRNFGGYGCVLADDMGLGKTFQSVTLLWTLLTQGIEGKPTI 61
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRV--AALPIDGGSKAEIDNKLNSFMQ--TYGR-RP 260
+A ++ P+SLVKNW NEITKWLG R+ L + ++ ++ + +N + + Y R R
Sbjct: 62 TRAAVICPTSLVKNWANEITKWLGDRLDGGVLALSESAREDVIDAINRYTRKGIYQRERK 121
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCD--EGHRLKNCESQTYQALMGLKAKRRVLLS 318
P+L+ISYETFR HA H + + C HRLKN ++ T +AL L RRVLLS
Sbjct: 122 FPPVLIISYETFRIHAGRFHCH-TSAICCKWTRAHRLKNDKTITNKALASLPCLRRVLLS 180
Query: 319 GTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
GTP+QNDL E+F++V F N G+LGTA +FRK Y++PIL G++ A++++R K NE L
Sbjct: 181 GTPMQNDLEEFFAMVDFTNPGVLGTAAQFRKMYQSPILTGREPDATESQREKGNEAQGAL 240
Query: 379 IGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENT 437
+VN ++RRT+ LLSK+LP K Q+VC K++ LQ +LY + S V R KG G+ T
Sbjct: 241 SNLVNIFILRRTNELLSKHLPPKVVQLVCCKLSPLQIQLYRAISSSKDVMRMCKGTGKTT 300
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
K L+ ITSLKKLCNHP L+ D I+ +M L + Y S S + L + S
Sbjct: 301 K---QVLACITSLKKLCNHPKLIFDVIRAA-----QSMPAL-SSYIVSELSVR-LGQFSG 350
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
KL VL+ ML ++ ++IVL+SNYTQTLDLF+ + + Y +VRLDG+ ++KKR K+V
Sbjct: 351 KLAVLERMLHILYHEKKERIVLISNYTQTLDLFQNICRTCNYPFVRLDGTTSVKKRQKLV 410
Query: 558 ETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
+ FN T ++F F+LSSKAGGCGLNL+GA+RLV+FDPDWNPAND QA AR+WRDGQK+
Sbjct: 411 DVFNDPTQHQFAFLLSSKAGGCGLNLVGASRLVLFDPDWNPANDKQAAARIWRDGQKRRV 470
Query: 617 FVYRFLSTGSIEEKMMQR 634
F YRF STG+IEEK +R
Sbjct: 471 FEYRFFSTGTIEEKARKR 488
>gi|342185668|emb|CCC95153.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 1029
Score = 482 bits (1241), Expect = e-133, Method: Compositional matrix adjust.
Identities = 264/592 (44%), Positives = 367/592 (61%), Gaps = 37/592 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKD-KIQVHVVVDPVLSNILRPHQREGVKFMY 159
K LHDP A++L+ H K D + ++QV VVVDPV+ + LRPHQR GVKF++
Sbjct: 324 KPLHDPDREGAVILF-------HAHYKRDVNGRLQVSVVVDPVIGDKLRPHQRVGVKFLF 376
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKN 219
+C+TG R+ +G I+ADEMGLGKT+Q + ++T LRQG P K +IV PSSLVKN
Sbjct: 377 DCITGERMPGYHGAILADEMGLGKTIQTVATVYTCLRQGKYGNPTARKCLIVTPSSLVKN 436
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
WCNE KWLG G V I S + D ++ F +LVISY+ R + +
Sbjct: 437 WCNEFDKWLGVGAVKYFAISE-STPKGDRIISRFDGE------GDVLVISYDQLRKYITR 489
Query: 279 LHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
+ V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V FVN
Sbjct: 490 ISTLKSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVN 549
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
GILG+ F + +E P+ G+D + R +R L + + ++RRT ++ Y
Sbjct: 550 PGILGSRDVFARVFEEPVTLGRDPDCPEYLRMLGADRAHYLSNLTQKFILRRTQSINESY 609
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LP K + V +++ Q+ Y ++ + EN++ T L I++L+KLCNH
Sbjct: 610 LPPKVDLTVFVRLGVKQETAY---------KKVAELVENSQC--TPLVLISALRKLCNHM 658
Query: 458 DLVMDKIQTGADGFENA---MNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
DL + + +N +++P GY K G L E+ +K+ + ML ++ D
Sbjct: 659 DLFHEAVLNSNKNNDNGSLPTSLIPKGY----KVGTLSEEVGSKMRFVSLMLDELQKNGD 714
Query: 515 -DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLS 572
DK+V+VSN+TQTLD+ L K++ + +LDGSM IKKR +VV+ FN S E +F+LS
Sbjct: 715 HDKLVIVSNFTQTLDVIASLCKMKKISFFQLDGSMPIKKRQEVVDRFNTPVSKEIVFLLS 774
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK F+YR LSTGSIEEK+
Sbjct: 775 SKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVFIYRLLSTGSIEEKIY 834
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
QRQ K+ LS+ VVD + D +HF++ ELRSLF+ +T S+THD + C+ C
Sbjct: 835 QRQVSKQGLSANVVDMQSDSKQHFTLDELRSLFRYRSDTNSETHDLLHCTNC 886
>gi|348588337|ref|XP_003479923.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Cavia
porcellus]
Length = 933
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 273/619 (44%), Positives = 373/619 (60%), Gaps = 47/619 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP + LRPHQ+EG+ F+YE
Sbjct: 245 KPRHDPYTPNSLVMPRPDK--NHQWMLNKNCFPVVDVVIDPHVVYHLRPHQKEGIIFLYE 302
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ YG I+ADEMGLGKTLQCI+L+WTL QGP +P+I + +IV P SLV N
Sbjct: 303 CVMGMRMNGRYGAILADEMGLGKTLQCISLIWTLQCQGPYGGQPVIKRTLIVTPGSLVTN 362
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E +WLG R+ +D D+K+ FM++ +L+ISYE
Sbjct: 363 WRKEFKQWLGSERIKIFTVDQ------DHKVEEFMKS----TFYSVLIISYEMLLRSLDQ 412
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL L K+R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 413 IKNIKFDLLICDEGHRLKNSAIKTTTALFSLSCKKRIILTGTPIQNDLQEFFALIDFVNP 472
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 473 GVLGSLSSYRKIYEEPIIMSREPSASEEEKELGERRAAELTRLTGLFILRRTQEVINKYL 532
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHP 457
P K E V+ + LQ ELY L+ S V+ ++G EN+ L I +LKKLCNHP
Sbjct: 533 PPKIENVLFCRPGTLQIELYKKLLNSQTVKFCLQGSVENS----PHLICIGALKKLCNHP 588
Query: 458 DLVMDKIQ-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ T DG +E +N+ PT Y + K S KL VL +L
Sbjct: 589 CLLFNSIKGKECSTTCDGNEEKSLYEGLLNVFPTDYNPLVFTEK----ESGKLQVLSQLL 644
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ +K+VLVSNYTQTLD+ + + K GY Y RLDG I +R ++V+ FN K S
Sbjct: 645 AVIHELRPTEKVVLVSNYTQTLDILQDICKRYGYSYTRLDGQTPISQRQQIVDGFNSKYS 704
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK +YR L+T
Sbjct: 705 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHAVHIYRLLTT 764
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ALS VVD + FS+ EL++LF L EN+ THD + C
Sbjct: 765 GTIEEKIYQRQISKQALSGAVVDLTKTSEHIQFSVEELKNLFTLHENSHCVTHDLLDC-E 823
Query: 684 CVNGIQVKPPPLESDCTDD 702
C E D TDD
Sbjct: 824 CTG---------EKDHTDD 833
>gi|407425454|gb|EKF39433.1| DNA repair and recombination protein RAD54, putative [Trypanosoma
cruzi marinkellei]
Length = 1049
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 268/619 (43%), Positives = 373/619 (60%), Gaps = 43/619 (6%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ 134
F VP+ G T G+R E K LHDP A+VL+ D + ++Q
Sbjct: 302 FTVPV----AGRPKTGPSGIRAE--LKPLHDPDREGAVVLFRA------DYKRDANGRLQ 349
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VVVDPV+ + LRPHQR GV+F+++C+TG R+ +G I+ADEMGLGKT+Q + ++T
Sbjct: 350 VSVVVDPVIGDKLRPHQRAGVRFLFDCITGERMPGYHGAILADEMGLGKTIQTVATIYTC 409
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
LRQG P K ++V PSSLVKNWCNE KWLG G V I S + D ++ F
Sbjct: 410 LRQGKHGVPTARKCLVVTPSSLVKNWCNEFDKWLGEGAVKYFSISE-STPKGDRIISRFD 468
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+LVISY+ R + + + V LV+CDEGHRLKN E +T +A+ L +
Sbjct: 469 GE------GDVLVISYDQLRKYITRISTLKSVELVVCDEGHRLKNAEVKTTKAVDMLPTR 522
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
R++LSGTPIQNDL E+ ++V FVN GILG+ F + +E P+++G+D + R+ +
Sbjct: 523 NRIILSGTPIQNDLSEFHAMVGFVNPGILGSRDVFARVFEEPVMQGRDPDCPEHLRSLGS 582
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+R L + R ++RRT ++ YLP K + V +++ +LQ Y L S V ++
Sbjct: 583 DRAHYLSNLTQRFILRRTQSINESYLPPKVDVTVFVRLGELQSVAYEKL--SALVESSL- 639
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA-----DGFENAMNILPTGYAASYK 487
L I++L+KLCNH DL + + + +G +LP GY K
Sbjct: 640 --------CPPLVLISALRKLCNHMDLFYEAVLNSSKEEVREGRGIPKTVLPKGY----K 687
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
SG L K+ + ML ++ D DK+V+VSN+TQTLD+ + + + + +LDG
Sbjct: 688 SGTLSEAAGGKMHFVSLMLDELRNNGDRDKLVIVSNFTQTLDVIAAMCRQKRISFFQLDG 747
Query: 547 SMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
SM +K+R +VV+ FN S E +F+LSSKAGG GLNLIGANRL++FDPDWNPAND QAM
Sbjct: 748 SMPVKRRQEVVDRFNVPESQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMG 807
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
RVWRDGQKK F+YR LS GSIEEK+ QRQ K+ LS+ VVD + D +HF++ ELRSLF
Sbjct: 808 RVWRDGQKKRVFIYRLLSAGSIEEKIYQRQVSKQGLSANVVDMQSDSKQHFTLEELRSLF 867
Query: 666 QLEENTISDTHDKIKCSRC 684
++T SDTHD + C+ C
Sbjct: 868 CYRKDTRSDTHDLLHCTNC 886
>gi|440906247|gb|ELR56532.1| DNA repair and recombination protein RAD54B [Bos grunniens mutus]
Length = 911
Score = 481 bits (1239), Expect = e-133, Method: Compositional matrix adjust.
Identities = 282/672 (41%), Positives = 383/672 (56%), Gaps = 62/672 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P + H L V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYAPNSLVMLRPDK--NHQWLFNKNCFPVVDVVIDPHLVYYLRPHQKEGITFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP++ K +IV P SLV N
Sbjct: 310 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D K E + + P +L+ISYE
Sbjct: 370 WKKEFQKWLGIERIKIFTVDQDHKVE----------EFTKSPFYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNVKFDLLICDEGHRLKNSTIKTTTALISLSCEKRIILTGTPVQNDLQEFFTLIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS+ ER +R +L + ++RRT ++++YL
Sbjct: 480 GILGSLSAYRKIYEEPIIISRQPSASEEERELGEQRAAELTCLTGLFILRRTQEVINQYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ LY L+ S AVR ++G ENT + L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIALYRKLLNSQAVRFCLQGLLENT----SHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ I+ +E MN+ P A Y E S KL VL +L
Sbjct: 596 CLLFGSIKEKESNSTWDESEERNLYEGLMNVFP----ADYNPIMFTEEESGKLQVLSKLL 651
Query: 507 AVIKMTTDD---KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-K 562
AVI+ + ++VLVSNYT+TLD+ + + K GY Y RLDG I +R ++V+ FN K
Sbjct: 652 AVIRELRPEVRGQVVLVSNYTRTLDILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSK 711
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
S++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L
Sbjct: 712 YSSDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLL 771
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
+TG+IEEK+ QRQ K+ LS V+D + FS+ EL++LF L E++ THD + C
Sbjct: 772 TTGTIEEKIYQRQISKQGLSGAVIDLSKTSDHIQFSVEELKNLFTLHESSHCVTHDLLDC 831
Query: 682 SRCV----NGIQVKPPPLESDC--------TDDLSCWHHVTEKRW---------LVDPIL 720
C G ++ P+ +C +D L K+W L DP L
Sbjct: 832 -ECTGENHTGDSLEKLPVSRNCQLGPHQQKSDSLKPLSMSQLKQWRHFPGDHLNLTDPFL 890
Query: 721 KHCWGAGVSFVF 732
+ VSF F
Sbjct: 891 ERI-RENVSFFF 901
>gi|452002263|gb|EMD94721.1| hypothetical protein COCHEDRAFT_1167819 [Cochliobolus
heterostrophus C5]
Length = 888
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 284/671 (42%), Positives = 393/671 (58%), Gaps = 50/671 (7%)
Query: 21 KTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPIL 80
K P+++ K KPL SV + + KE + E++ + + FK P+L
Sbjct: 141 KAVAAPIQQPKPPELGHKPLSSVKPNSKKTQETAADKESVPEYKPSAHR--KQQFKAPLL 198
Query: 81 NYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVD 140
ST + R + HDP APNAL++ P K K V VVVD
Sbjct: 199 -------STTVMPQRNPSIPQPRHDPDAPNALIMKRPGSCP--------KGKQIVDVVVD 243
Query: 141 PVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL 200
PVLS LR HQREGV+F+YECV G+R E G IMADEMGLGKTLQ ITL+WTL++Q P+
Sbjct: 244 PVLSKHLRDHQREGVQFLYECVMGMRCE-GEGAIMADEMGLGKTLQTITLLWTLMKQNPI 302
Query: 201 --AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYG 257
+ P+I KA+IV P+ LV NW E KWLG RV +D +K K+ +F T G
Sbjct: 303 HDSPPVIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNK-----KIANF--TMG 355
Query: 258 RRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ I+++ YE R L K V +V+ DEGHRLK ++ A+ L +RR++
Sbjct: 356 KS--YNIMIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRII 413
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTP+QNDL E+++ + FVN G+LG F++ +E PI+R + AS+AE K R +
Sbjct: 414 LSGTPLQNDLGEFYTAIDFVNPGLLGQRTAFKRSFELPIMRSRQPDASEAELEKGEARWK 473
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+L+ + ++ +IRRT+ +LSKYLP KTE +V + T Q E Y ++ S R + +
Sbjct: 474 ELVSLTSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILDSPTFRLALGSTD- 532
Query: 437 TKLGMTALSSITSLKKLCNHPDLV---MDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
AL I LKK+CN P L+ D T ++ ++ + ++P+ S S
Sbjct: 533 -----IALQLINVLKKVCNSPSLLKSSKDNDDTPSEMLQSIIPLIPSKILNSSAS----- 582
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
SAKL +LD+++ I TT++KIV+VSNYT TLD+ ERL Y ++RLDGS KR
Sbjct: 583 --SAKLRLLDSLVHSIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTFLRLDGSTPASKR 640
Query: 554 AKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
++E FNKT + F F+LS+K+GG GLNLIGA+R+V+FD DWNPA D QAMAR+ RDG
Sbjct: 641 QSLIEKFNKTPKTTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDG 700
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
QK PC VYRFL G ++EK+ QRQ K L++ VVD + A FS ELR LF+L+E
Sbjct: 701 QKLPCKVYRFLVQGGLDEKIYQRQVMKMGLANAVVDNKAS-ASSFSQEELRDLFRLDERE 759
Query: 672 ISDTHDKIKCS 682
THD + C+
Sbjct: 760 GCQTHDLLGCT 770
>gi|355715095|gb|AES05224.1| RAD54-like protein [Mustela putorius furo]
Length = 390
Score = 481 bits (1237), Expect = e-133, Method: Compositional matrix adjust.
Identities = 234/396 (59%), Positives = 299/396 (75%), Gaps = 11/396 (2%)
Query: 350 QYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIK 409
+E PIL+G+D+ AS+A+R +RL + + +RCLIRRTS +LSKYLPVK EQVVC +
Sbjct: 1 HFELPILKGRDAAASEADRRLGEQRLAGVPRLGDRCLIRRTSDILSKYLPVKIEQVVCCR 60
Query: 410 MTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD 469
+T LQ ELY ++ ++ G K+ M++LSSIT LKKLCNHP L+ DK D
Sbjct: 61 LTPLQTELYKRFLRQAKPAEELREG---KMTMSSLSSITLLKKLCNHPALIYDKCVEEED 117
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFE A+ I P GY+ S L +LS K++VLD +LAV + + DK+VLVSNYTQTLDL
Sbjct: 118 GFEGALEIFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDL 173
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRL 588
FE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNLIGANRL
Sbjct: 174 FEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPSSPDFVFMLSSKAGGCGLNLIGANRL 233
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
VMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALSSCVVD
Sbjct: 234 VMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDE 293
Query: 649 EEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHH 708
E+DV RHFS+ EL+ LF L+E ++SDTH++++C RCVN QV+PPP SDCT DL+ W+H
Sbjct: 294 EQDVERHFSLGELKELFTLDEASLSDTHERLRCRRCVNNHQVRPPPDGSDCTSDLAQWNH 353
Query: 709 VTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 354 NTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 389
>gi|426235834|ref|XP_004011884.1| PREDICTED: DNA repair and recombination protein RAD54B [Ovis aries]
Length = 909
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 266/598 (44%), Positives = 362/598 (60%), Gaps = 37/598 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P + H L V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYAPNSLVMLRPDK--NHQWLFNKNCFPVVDVVIDPHLVYYLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP +P++ K +IV P SLV N
Sbjct: 310 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGRPVVKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F ++ P +L+ISYE
Sbjct: 370 WRKEFQKWLGIERIKIFTVDQ------DHKIEEFTKS----PFYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN + AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKSIKFDLLICDEGHRLKNSTIKATTALISLSCEKRIILTGTPVQNDLQEFFTLIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS+ ER +R +L + ++RRT ++++YL
Sbjct: 480 GILGSLSAYRKIYEEPIIISRQPSASEEERELGEQRAAELTCLTGLFILRRTQEVINQYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ LY L+ S AVR ++G ENT + L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIALYRKLLNSQAVRFCLQGLLENT----SHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ ++ +E +N+ P A Y E S KL VL +L
Sbjct: 596 CLLFGSVKEKESNSTWDESEERSLYEGLINVFP----ADYNPTMFTEEESGKLQVLSKLL 651
Query: 507 AVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI+ + +K+VLVSNYT+TLD+ + + K GY Y RLDG I +R K+V+ FN K S
Sbjct: 652 AVIRELRPAEKVVLVSNYTRTLDILQEVCKRHGYAYTRLDGQTPISQRQKIVDGFNSKYS 711
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 712 PDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 771
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 772 GTIEEKIYQRQISKQGLSGAVVDLSKTSDHIQFSVEELKNLFTLHESSHCVTHDLLDC 829
>gi|301788109|ref|XP_002929471.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Ailuropoda melanoleuca]
Length = 911
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 284/671 (42%), Positives = 386/671 (57%), Gaps = 61/671 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P S H V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 253 KPRHDPHAPNSLVMSRPD--SNHQWTFNRNCFPIVDVVIDPHLVYHLRPHQKEGIIFLYE 310
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 311 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 370
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ P+D K E + + P +L+ISYE
Sbjct: 371 WRKEFQKWLGSERIKIFPVDQDHKVE----------EFTKSPFYSVLIISYEMLLRSLDQ 420
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 421 VKNVKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 480
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GIL + +RK YE PI+ + AS+ E+ +R +L + ++RRT +++KYL
Sbjct: 481 GILSSLSSYRKIYEEPIIISRQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYL 540
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G LG + L I +LKKLCNHP
Sbjct: 541 PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQG----LLGNSPHLICIGALKKLCNHP 596
Query: 458 DLVMDKIQ-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ + DG +E +++ P A Y + E S KL VL +L
Sbjct: 597 CLLFNSIKEKEYSSTWDGNEERSLYEGLVDVFP----ADYNPLMFMEEESGKLQVLMKLL 652
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN K S
Sbjct: 653 AVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYS 712
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 713 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 772
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 773 GTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKNLFILHESSHCVTHDLLDC-E 831
Query: 684 CVN-----GIQVKPPPLESDC----------------TDDLSCWHHVTEKRW-LVDPILK 721
C G ++ P+ +C L W H + L DP L+
Sbjct: 832 CTGDKDGTGDSLEKFPISRNCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLADPFLE 891
Query: 722 HCWGAGVSFVF 732
VSF F
Sbjct: 892 RI-RENVSFFF 901
>gi|281347253|gb|EFB22837.1| hypothetical protein PANDA_019651 [Ailuropoda melanoleuca]
Length = 810
Score = 479 bits (1233), Expect = e-132, Method: Compositional matrix adjust.
Identities = 284/671 (42%), Positives = 386/671 (57%), Gaps = 61/671 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P S H V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 152 KPRHDPHAPNSLVMSRPD--SNHQWTFNRNCFPIVDVVIDPHLVYHLRPHQKEGIIFLYE 209
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 210 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 269
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ P+D K E + + P +L+ISYE
Sbjct: 270 WRKEFQKWLGSERIKIFPVDQDHKVE----------EFTKSPFYSVLIISYEMLLRSLDQ 319
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 320 VKNVKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 379
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GIL + +RK YE PI+ + AS+ E+ +R +L + ++RRT +++KYL
Sbjct: 380 GILSSLSSYRKIYEEPIIISRQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYL 439
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G LG + L I +LKKLCNHP
Sbjct: 440 PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQG----LLGNSPHLICIGALKKLCNHP 495
Query: 458 DLVMDKIQ-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ + DG +E +++ P A Y + E S KL VL +L
Sbjct: 496 CLLFNSIKEKEYSSTWDGNEERSLYEGLVDVFP----ADYNPLMFMEEESGKLQVLMKLL 551
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN K S
Sbjct: 552 AVIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPISQRQQIVDGFNSKYS 611
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 612 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 671
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 672 GTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKNLFILHESSHCVTHDLLDC-E 730
Query: 684 CVN-----GIQVKPPPLESDC----------------TDDLSCWHHVTEKRW-LVDPILK 721
C G ++ P+ +C L W H + L DP L+
Sbjct: 731 CTGDKDGTGDSLEKFPISRNCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLADPFLE 790
Query: 722 HCWGAGVSFVF 732
VSF F
Sbjct: 791 RI-RENVSFFF 800
>gi|432106413|gb|ELK32206.1| DNA repair and recombination protein RAD54B [Myotis davidii]
Length = 817
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 265/598 (44%), Positives = 365/598 (61%), Gaps = 37/598 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P + H + V VV+DP L+ LRPHQ+EG+ F+YE
Sbjct: 158 KPRHDPCAPNSLVMPRPDK--NHQWMFNKNCFPVVDVVIDPHLAYYLRPHQKEGLIFLYE 215
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 216 CVMGMRVNGRCGAILADEMGLGKTLQCISLLWTLQCQGPYGGKPIIKKTLIVTPGSLVNN 275
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ P+ +L+ISYE
Sbjct: 276 WRREFQKWLGSERIKIFTVDQ------DHKVEEFIKS----PLYSVLIISYEMLLRSLDQ 325
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 326 IKNIKFDLLICDEGHRLKNSAIKTTTALISLACEKRIILTGTPVQNDLQEFFALIDFVNP 385
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ FRK YE PI+ + AS ++ R +L+ +RRT +++KYL
Sbjct: 386 GILGSLSSFRKIYEEPIIVSRQPSASKEDKELGERRAAELVCFTGLFFLRRTQEVINKYL 445
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G EN+ L I +LKKLCNHP
Sbjct: 446 PPKIENVVFCRPGALQLELYQKLLNSQAVRFCLQGSLENS----PHLICIGALKKLCNHP 501
Query: 458 DLVMDKIQTG-----------ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ + +E +N+ P A Y + S KL VL +L
Sbjct: 502 CLLFNSIKEKECSSTWDEHEESSLYEGLLNVFP----ADYNPLMFTEKESGKLQVLTKLL 557
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ D++VLVSNYTQTL++ + + K GY RLDG + +R ++V+ FN K S
Sbjct: 558 AVIHELRPTDRVVLVSNYTQTLNILQEVCKRHGYACTRLDGQTPVSQRQQIVDGFNSKYS 617
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 618 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 677
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 678 GTIEEKIYQRQISKQGLSGAVVDLAKTSEHIQFSVEELKNLFTLHESSHCVTHDLLDC 735
>gi|330936688|ref|XP_003305493.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
gi|311317475|gb|EFQ86421.1| hypothetical protein PTT_18347 [Pyrenophora teres f. teres 0-1]
Length = 890
Score = 479 bits (1232), Expect = e-132, Method: Compositional matrix adjust.
Identities = 283/665 (42%), Positives = 391/665 (58%), Gaps = 53/665 (7%)
Query: 26 PVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGG 85
P+++ KR KPL S ++ S + E + E++ ++ + FK P+L+ T
Sbjct: 146 PIEQSKRVEPGYKPLSSAKSKANKKS---VAGESVPEYKPSAQR--NQQFKAPLLSNT-- 198
Query: 86 GYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSN 145
+ R + HDP PNAL++ P K K V VVVDPVLS
Sbjct: 199 -----VMPQRNLSIPQPRHDPHVPNALIMKRPDSCP--------KGKQIVDVVVDPVLSK 245
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKP 203
LR HQR+GV+F+YECV G+R E G IMADEMGLGKTLQ I L+WTL++Q P+ A P
Sbjct: 246 HLREHQRDGVQFLYECVMGMRCE-GEGAIMADEMGLGKTLQTIALLWTLMKQNPIHGASP 304
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+I KA+IV P+ LV NW E KWLG R+ +D +K K+ +F T G+
Sbjct: 305 VIKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNK-----KIANF--TMGKS--Y 355
Query: 263 PILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
IL++ YE R + L K V +V+ DEGHRLK ++ A+ L +RR++LSGTP
Sbjct: 356 NILIVGYEMLRVYQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSGTP 415
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QNDL E+++ + FVN G+LG F++ +E PI+R + AS++E K R ++L+ +
Sbjct: 416 LQNDLGEFYTAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESELEKGEARWKELVSL 475
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+R +IRRT+ +LSKYLP KTE +V + T Q E Y ++ S R M +
Sbjct: 476 TSRFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAEAYRAILDSPTFRLAMGSSD------ 529
Query: 442 TALSSITSLKKLCNHPDLV---MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAK 498
AL I LKK+CN P L+ D T ++ ++ + ++P S S SAK
Sbjct: 530 IALQLINVLKKICNSPSLLKSSKDNDDTPSEMLQSILPLIPNNILNSSAS-------SAK 582
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
L +LD+++ I TT++KIV+VSNYT TLD+ ERL Y Y+RLDGS KR +VE
Sbjct: 583 LRLLDSLVHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTYLRLDGSTPASKRQALVE 642
Query: 559 TFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
FNKT + F F+LS+K+GG GLNLIGA+R+V+FD DWNPA D QAMAR+ RDGQK PC
Sbjct: 643 KFNKTPKTTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPC 702
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
VYRFL G ++EK+ QRQ K L++ VVD + A FS ELR LF+L+E TH
Sbjct: 703 KVYRFLVQGGLDEKIYQRQIMKMGLANAVVDNKAS-ASSFSQEELRDLFRLDERDGCQTH 761
Query: 677 DKIKC 681
D + C
Sbjct: 762 DILGC 766
>gi|340058717|emb|CCC53077.1| putative DNA repair and recombination protein RAD54 [Trypanosoma
vivax Y486]
Length = 1024
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 259/592 (43%), Positives = 359/592 (60%), Gaps = 36/592 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKD-KIQVHVVVDPVLSNILRPHQREGVKFMY 159
K LHDP A+ L+ H K D + ++QV VVVDP++ + LRPHQR GVKF++
Sbjct: 317 KPLHDPEREGAVTLF-------HAHYKRDVNGRLQVSVVVDPIIGDKLRPHQRVGVKFLF 369
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKN 219
+C+TG R+ +G I+ADEMGLGKT+Q + ++T LRQG P KA+IV PSSLVKN
Sbjct: 370 DCITGERMPGYHGAILADEMGLGKTIQTVATVYTCLRQGKHGTPTARKALIVTPSSLVKN 429
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
WCNE KWLG G V I S + D ++ F +LVISY+ R + S
Sbjct: 430 WCNEFDKWLGQGAVKYFAISE-STPKGDRIISRFEGE------GDVLVISYDQLRKYISR 482
Query: 279 LHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
+ V LV+CDEGHRLKN E +T +++ L + R++LSGTPIQNDL E+ ++V FVN
Sbjct: 483 ISTIKSVELVVCDEGHRLKNAEVKTTKSVDMLPTRNRIILSGTPIQNDLSEFHAMVGFVN 542
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
GILG+ F + +E P+ G+D + R+ +R L + R ++RRT ++ Y
Sbjct: 543 PGILGSRDVFARVFEEPVTLGRDPDCPEHLRSLGADRAHYLSNLTQRFILRRTQSINESY 602
Query: 398 LPVKTEQVVCIKMTDLQKELY---TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
LP K + V +++ +Q+ Y NL+ S T L I++L+KLC
Sbjct: 603 LPPKVDLTVFVRLGAMQRTTYESLANLVDSSQC--------------TPLVLISALRKLC 648
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
NH DL + + + I + +K G L +K+ + ML ++ D
Sbjct: 649 NHMDLFHEAVLNSRKEGDKQQGIPKSVLPKGFKLGTLSEATGSKMQFVSLMLDELRKNGD 708
Query: 515 -DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLS 572
DK+V+VSN+TQTLD+ + + + + +LDGSM IKKR +VV+ FN S E +F+LS
Sbjct: 709 RDKLVIVSNFTQTLDVIAVMCRAKNVSFFQLDGSMPIKKRQEVVDRFNIPGSQEIVFLLS 768
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQKK ++YR LSTGSIEEK+
Sbjct: 769 SKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQKKRVYIYRLLSTGSIEEKIY 828
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
QRQ K+ LS+ VVD + D +HF++ ELRSLF+ +T S+THD + C+ C
Sbjct: 829 QRQVSKQGLSANVVDMKTDSKQHFTLDELRSLFRYRGDTTSETHDLLNCTNC 880
>gi|189209013|ref|XP_001940839.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187976932|gb|EDU43558.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 893
Score = 478 bits (1230), Expect = e-132, Method: Compositional matrix adjust.
Identities = 282/668 (42%), Positives = 392/668 (58%), Gaps = 50/668 (7%)
Query: 24 PPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYT 83
P P+++ KR KPL S ++ S E + E++ ++ + FK P+L+ T
Sbjct: 144 PAPIEQSKRVEPGYKPLSSAKSKANRKSIAADDGENVPEYKPSAQR--NQLFKAPLLSNT 201
Query: 84 GGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVL 143
+ R + HDP APNAL++ P K K V VVVDPVL
Sbjct: 202 -------VIPQRNPSIPQPRHDPHAPNALIMKRPDSCP--------KGKQIVDVVVDPVL 246
Query: 144 SNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--A 201
S LR HQR+GV+F+YECV G+R E G IMADEMGLGKTLQ I L+WTL++Q P+ A
Sbjct: 247 SKHLREHQRDGVQFLYECVMGMRCE-GEGAIMADEMGLGKTLQTIALLWTLMKQNPIHGA 305
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
P+I KA+IV P+ LV NW E KWLG R+ +D +K K+ +F T G+
Sbjct: 306 SPVIKKALIVCPAGLVDNWKREFKKWLGNERIGVYVLDAKNK-----KIANF--TMGKS- 357
Query: 261 VNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL++ YE R + L + V +V+ DEGHRLK ++ A+ L +RR++LSG
Sbjct: 358 -YNILIVGYEMLRVYQEELKRGSGVDIVIADEGHRLKTANNKAMLAIQSLNTERRIILSG 416
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TP+QNDL E+++ + FVN G+LG F++ +E PI+R + AS+++ K R ++L+
Sbjct: 417 TPLQNDLGEFYTAIDFVNPGLLGQRAAFKRTFEAPIIRSRQPDASESDLEKGEARWKELV 476
Query: 380 GIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
+ ++ +IRRT+ +LSKYLP KTE +V + T Q E Y ++ S R M +
Sbjct: 477 SLTSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAEAYRAVLDSPTFRLAMGSSD---- 532
Query: 440 GMTALSSITSLKKLCNHPDLV---MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
AL I LKK+CN P L+ D T ++ ++ + ++P S S S
Sbjct: 533 --IALQLINVLKKICNSPSLLKSSKDNDDTPSEMLQSILPLIPNNILNSSAS-------S 583
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
AKL +LD+++ I TT++KIV+VSNYT TLD+ ERL Y Y+RLDGS KR +
Sbjct: 584 AKLRLLDSLVHRIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTYLRLDGSTPASKRQAL 643
Query: 557 VETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
VE FNKT + F F+LS+K+GG GLNLIGA+R+V+FD DWNPA D QAMAR+ RDGQK
Sbjct: 644 VEKFNKTPKTTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKL 703
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
PC VYRFL G ++EK+ QRQ K L++ VVD + A FS ELR LF+L+E
Sbjct: 704 PCKVYRFLVQGGLDEKIYQRQIMKMGLANAVVDNKAS-ASSFSQEELRDLFRLDERDGCQ 762
Query: 675 THDKIKCS 682
THD C+
Sbjct: 763 THDISGCT 770
>gi|410987472|ref|XP_004000025.1| PREDICTED: DNA repair and recombination protein RAD54B [Felis
catus]
Length = 911
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 280/671 (41%), Positives = 387/671 (57%), Gaps = 61/671 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP A N+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 253 KPRHDPHAQNSLVMSRPD--NNHQWMFNKNCSPIVDVVIDPYLVYHLRPHQKEGILFLYE 310
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 311 CVMGMRVSGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 370
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ P+D D+K+ F+++ P +L+ISYE
Sbjct: 371 WRKEFQKWLGSERIKIFPVDQ------DHKVEEFIKS----PFYSVLIISYEMLLRSLDQ 420
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 421 IKNVKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 480
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS+ E+ +R +L + ++RRT +++KYL
Sbjct: 481 GILGSLSSYRKIYEEPIILSRQPSASEEEKELGEKRAAELTCLTGLFILRRTQEVINKYL 540
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G LG + L I +LKKLCNHP
Sbjct: 541 PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQG----LLGDSPHLICIGALKKLCNHP 596
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + I+ +E +N+ P A Y E S KL VL +L
Sbjct: 597 CLLFNSIKGRECSSTWDENEERSLYEGLVNVFP----ADYNPLMFTEEESGKLQVLLKLL 652
Query: 507 AVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI+ + +K+VLVSNYTQTL++ + + + GY + RLDG + +R ++V+ FN K S
Sbjct: 653 AVIRELRPTEKVVLVSNYTQTLNILQEVCRRHGYAFTRLDGQTPVSQRQQIVDGFNSKYS 712
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 713 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 772
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L E++ THD + C
Sbjct: 773 GTIEEKIYQRQISKQDLSGAVVDLTKTSEHIQFSVEELKNLFTLHESSHCVTHDLLDC-E 831
Query: 684 CVN-----GIQVKPPPLESDC----------------TDDLSCWHHVTEKRW-LVDPILK 721
C G ++ P+ +C L W H + L DP L+
Sbjct: 832 CTGDKDHTGDSLEKVPISRNCQLGPHHQKSSSLKPLSMSQLKQWKHFSGDHLNLTDPFLE 891
Query: 722 HCWGAGVSFVF 732
VSF F
Sbjct: 892 SI-RENVSFFF 901
>gi|297278613|ref|XP_002801591.1| PREDICTED: DNA repair and recombination protein RAD54-like [Macaca
mulatta]
Length = 511
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 247/400 (61%), Positives = 289/400 (72%), Gaps = 29/400 (7%)
Query: 1 RRSLAPSQLSKRSP-------ED-SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR P ED PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPGGGSSKDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAMVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVPSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
A EF+K +E PIL+G+D+ AS+A+R ERL +L I
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRKLGEERLRELTSIAG 389
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 91/121 (75%), Gaps = 3/121 (2%)
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C R
Sbjct: 388 AGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRR 447
Query: 684 CVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAE 740
CVN Q++PPP SDCT DL+ W+H T+KR L D +L+ W A ++FVF+Q S + +
Sbjct: 448 CVNSRQIRPPPDGSDCTSDLAQWNHCTDKRGLQDEVLQAAWDAASTAITFVFHQRSHEEQ 507
Query: 741 K 741
+
Sbjct: 508 R 508
>gi|66811390|ref|XP_639875.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
gi|60466825|gb|EAL64871.1| SNF2-related domain-containing protein [Dictyostelium discoideum
AX4]
Length = 989
Score = 476 bits (1226), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/604 (41%), Positives = 382/604 (63%), Gaps = 34/604 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP + +AL+ Y+PP L + +K+ VHVV+DP + LRPHQR GVKF+Y+CVT
Sbjct: 241 HDPNSKDALIFYSPPP----SQLDEEGNKV-VHVVLDPYIGRHLRPHQRRGVKFLYDCVT 295
Query: 164 GVRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G ++ Y G I+AD+MGLGKTLQ + L+WTLL+Q P KP I KAIIV PS+LV NW +
Sbjct: 296 GNSNDNGYSGAILADQMGLGKTLQTLALLWTLLKQSPYGKPTIKKAIIVTPSTLVNNWKS 355
Query: 223 EITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
EI KW G GR+ A + E LN F + + P+L+ISYE R + L
Sbjct: 356 EIQKWFGNGRLIASTLTDSLTKETKANLNDFNTS-----IKPVLIISYEQCRIFSKELET 410
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
GL++CDE HRLKN ++T Q++M ++ R++LL+GTPIQN+L+E++S++ F N L
Sbjct: 411 MSCGLMVCDEAHRLKNSNAKTTQSIMSVRCDRKILLTGTPIQNNLVEFYSMMDFANPNCL 470
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G+ +F+K + PI + ++S S + + + QL +V +IRR S +L KYLP K
Sbjct: 471 GSLADFKKSFIIPINKSRESPNSTSTSEGIRKSI-QLSKLVKPFIIRRKSNILEKYLPPK 529
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM 461
Q++ K++ LQ ELY +++ S++V+ + GG ++ T+LS+IT LKKLCN P L++
Sbjct: 530 RVQIIFCKLSSLQIELYKSILNSNSVKSLLSGG-GSRGSATSLSTITLLKKLCNSPSLLL 588
Query: 462 --DKIQTGADGFENAMNILPTGYAASYKSGKLLIEL----SAKLMVLDTMLAVIKMTTDD 515
+K G + + + + + + ++ + + E S KL+ +++++ +K ++
Sbjct: 589 LNNKQDEGGEQQQTEIQNILKKHNYTLENYQEIQEQQDNESGKLLFVESLIKQLK-PMNE 647
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEF-------- 567
K+VLVSN+T+TLD+FERL K +RLDG + R +V+ FN ++
Sbjct: 648 KLVLVSNFTKTLDVFERLCKRLSIDTLRLDGDVKADSRQALVDKFNSSTQNVSSSKSSSS 707
Query: 568 ---IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+F+LS+KAGG G+NLIG N LV++DPDWNPA D QAM R+WR+GQ KP F+YR ST
Sbjct: 708 QYQVFLLSAKAGGVGINLIGGNHLVLYDPDWNPAIDIQAMERIWREGQTKPVFIYRLFST 767
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCE-EDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+++S+ +VD + D +FS+ +L+ +F ENT SDTHD ++C+
Sbjct: 768 GTIEEKIYQRQLMKESISNSIVDKKFNDNGGNFSLEDLKDIFSYNENTNSDTHDLLQCN- 826
Query: 684 CVNG 687
C N
Sbjct: 827 CGNS 830
>gi|148230804|ref|NP_001085120.1| RAD54 homolog B [Xenopus laevis]
gi|47939775|gb|AAH72215.1| MGC81308 protein [Xenopus laevis]
Length = 895
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 283/703 (40%), Positives = 410/703 (58%), Gaps = 56/703 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
I KPF P+ N + K + K HDP+APNA V+ P+ S +
Sbjct: 206 IQVKPFTNPLKN--DSKTTNKDNMFKELQNIKPRHDPSAPNAFVM---PKPSQQHQWAFN 260
Query: 130 KDKIQ-VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
K + V VVVDP L+ LRPHQ+EG+ F+YECV G+R+ + +G I+ADEMGLGKTLQCI
Sbjct: 261 KSGLPIVDVVVDPYLAVHLRPHQKEGILFLYECVMGMRVNERFGAILADEMGLGKTLQCI 320
Query: 189 TLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEID 246
+L+WTLLRQGP AKP+I +A+IV P SLVKNW E KWLG R+ +D D
Sbjct: 321 SLIWTLLRQGPYGAKPVIKRALIVTPGSLVKNWRKEFQKWLGTERIRVFAVDQ------D 374
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+K+ F+ + P+ +L+ISYE + + LV+CDEGHRLKN +T +L
Sbjct: 375 HKVEEFVNS----PLYSVLIISYEMLLRCLEQIESLDFDLVICDEGHRLKNTSIKTTTSL 430
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L +R++LSGTP+QNDL E+F+L+ FVN +LG+ +RK +E PI+R ++ A+
Sbjct: 431 TSLTCSKRIILSGTPVQNDLQEFFALIEFVNPAVLGSLSTYRKVFEEPIVRSREPTATPE 490
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E+ ER +L + ++RRT +++K+LP K E +V + + Q +LY L+ S A
Sbjct: 491 EKNLGEERAAELARLTGLFILRRTQEVINKFLPPKIENIVFCQPSQFQLDLYRRLLNSRA 550
Query: 427 VRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKIQ---TGADG-----FENAMNI 477
V+ + G GEN+ L I +LKKLCNHP L+ IQ T D +E+ +
Sbjct: 551 VKSCLLGNGENSP----HLVCIGALKKLCNHPCLLFRTIQEKSTNPDQGEHSLYESIAEL 606
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
P Y + S E L++ + + +++ +++VLVS+YTQTL++ + L
Sbjct: 607 FPQDYDGAKISES---ESGKLLVLSKLLSGIRELSPSERVVLVSHYTQTLNILQALCVQH 663
Query: 538 GYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY RLDG + +R +V+ FN K S++FIF+LSSKAGG GLNLIGA+ L+++D DWN
Sbjct: 664 GYSCTRLDGQTPVTQRQHIVDGFNSKYSSDFIFLLSSKAGGVGLNLIGASHLILYDIDWN 723
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-H 655
PAND QAMARVWRDGQ++ +YR L+TGS+EEK+ QRQ K+ LS VVD +
Sbjct: 724 PANDIQAMARVWRDGQRRTVHIYRLLTTGSLEEKIYQRQISKQGLSGAVVDLTKKSEHIR 783
Query: 656 FSMSELRSLFQLEENTISDTHDKIKC----SRCVNGIQVKPPPLESDC------------ 699
FS+ ELR+LF L E+T TH+ ++C + C++ + P + C
Sbjct: 784 FSVDELRNLFTLHEDTDCVTHELLECDCIKTNCLSDGLPQKPLIHRSCQLELHRDQLNKN 843
Query: 700 --TDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAE 740
+L W H + ++ DP L+ +SFVF Q++T +
Sbjct: 844 FSMSELMQWKHFSGQQSTDDPFLQ-MGKEHISFVF-QNTTNIQ 884
>gi|189529831|ref|XP_688979.3| PREDICTED: DNA repair and recombination protein RAD54B [Danio rerio]
Length = 1174
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 266/594 (44%), Positives = 371/594 (62%), Gaps = 31/594 (5%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ-VHVVVDPVLSNILRPHQREGVKFMY 159
K +DP AP ALV+ P+ +A + +K V VV+DP L+N LRPHQ+EGV F+Y
Sbjct: 516 KPRYDPNAPGALVM---PRPTADHQWQYNKSGAPLVDVVIDPHLTNHLRPHQKEGVVFLY 572
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVK 218
EC+ G+R+ G I+ADEMGLGKTLQC+ ++WTLLRQGP +P++ +A++V P SLVK
Sbjct: 573 ECLMGMRLAGRCGAILADEMGLGKTLQCVCVLWTLLRQGPYGGRPVMKRALVVCPGSLVK 632
Query: 219 NWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHAS 277
NW E KWLG R++ +D D+++ F+ + P+ +LVISYE
Sbjct: 633 NWAAEFNKWLGRERISVYTVDQ------DHRVEDFVSS----PLCSVLVISYEMLLRSVD 682
Query: 278 VLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
L + + G+++CDEGHRLKN +T AL L RR++L+GTP+QNDL E++S++ FVN
Sbjct: 683 RLKELDFGVLICDEGHRLKNSNIKTAGALTALSCTRRLILTGTPVQNDLQEFYSIIEFVN 742
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
GILGT+ +RK YE PILR + ++ ER ER +L + +RRT ++++Y
Sbjct: 743 PGILGTSAAYRKIYEEPILRSRQPSCTEEERCIGEERAAELFRLTGVFTLRRTQEIINQY 802
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
L + E V K T+LQ LY L+ + +R + G +T L I +LKKLCNHP
Sbjct: 803 LSERIEWTVFCKPTELQIRLYRVLLSTRPIRACLSGS-HTYTHSPHLVCINALKKLCNHP 861
Query: 458 DLVMDKIQT------GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIK- 510
L+ + +Q + +E + L + Y +G S KL+VL +L+ I+
Sbjct: 862 ALLYNTLQVRMCSEKADEMYEGEVKEL---FPEEYSTGAFSTADSGKLLVLTDLLSAIQH 918
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIF 569
+ D++VLVSN+TQTLDL + + GYK+ RLDG + +R K+V++FN S+ F+
Sbjct: 919 VNRTDRVVLVSNHTQTLDLLQDVCDQIGYKWCRLDGQTPVGQRQKIVDSFNSPHSSSFLL 978
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGG GLNLIGA+ LV++D DWNPAND QAMARVWRDGQKK +YRFL+TGSIEE
Sbjct: 979 LLSSKAGGVGLNLIGASHLVLYDIDWNPANDIQAMARVWRDGQKKTVHIYRFLTTGSIEE 1038
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSLFQLEENTISDTHDKIKC 681
K+ QRQ K+ LS VVD + A H FS ELR LF+ + NT THD + C
Sbjct: 1039 KIYQRQVSKQGLSGTVVDLTKK-AEHISFSAEELRDLFRFDPNTTCLTHDLLNC 1091
>gi|350583049|ref|XP_003355071.2| PREDICTED: DNA repair and recombination protein RAD54B-like [Sus
scrofa]
Length = 895
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 283/670 (42%), Positives = 381/670 (56%), Gaps = 60/670 (8%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP APN+LV+ P + H + V VV+DP L LRPHQREG+ F+YE
Sbjct: 238 KPRHDPYAPNSLVMLRPD--NNHQWMFNKNHFPIVDVVIDPHLVYHLRPHQREGIIFLYE 295
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 296 CVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 355
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D K E + + P+ +L+ISYE
Sbjct: 356 WRKEFQKWLGSERIKIFTVDPDHKVE----------EFTKSPLYSVLIISYEMLLRSLDQ 405
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL L ++R++L+GTP+QNDL E+FSL+ FVN
Sbjct: 406 IKNIKFDLLICDEGHRLKNSAIKTTTALFSLPCEKRIILTGTPVQNDLQEFFSLIDFVNP 465
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS E+ R +L + ++RRT +++KYL
Sbjct: 466 GILGSLSCYRKIYEEPIITSRQPSASQEEKELGERRACELTCLTGLFILRRTQEVINKYL 525
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G EN+ + L I +LKKLCNHP
Sbjct: 526 PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLMENS----SHLICIGALKKLCNHP 581
Query: 458 DLVMDKIQ-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ ++ + D +E+ + + P Y E S KL VL +L
Sbjct: 582 CLLFSSVKEKECSSAWDENEERRLYEDLLKVFP----PDYNPLMFAEEESGKLQVLSKLL 637
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ +K+VLVSNYTQTL++ + + + GY RLDG I +R ++V+ FN K S
Sbjct: 638 AVIHELRPAEKVVLVSNYTQTLNILQEVCRRHGYGCTRLDGQTPISQRQQIVDGFNSKYS 697
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 698 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 757
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L EN+ THD + C
Sbjct: 758 GTIEEKIYQRQISKQDLSGAVVDLTKTSDHIQFSVEELKNLFTLHENSHCVTHDLLDC-E 816
Query: 684 CVN----GIQVKPPPLESDC----------------TDDLSCWHHVTEKRW-LVDPILKH 722
C G ++ PL C L W H + L DP L+
Sbjct: 817 CTGENHPGDSLEKFPLSRTCQLGPHQQKSNSLKPLSMSQLKQWKHFSGDHLNLSDPFLER 876
Query: 723 CWGAGVSFVF 732
G VSF F
Sbjct: 877 IRG-NVSFFF 885
>gi|431917856|gb|ELK17087.1| DNA repair and recombination protein RAD54B [Pteropus alecto]
Length = 910
Score = 476 bits (1224), Expect = e-131, Method: Compositional matrix adjust.
Identities = 280/671 (41%), Positives = 384/671 (57%), Gaps = 61/671 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYLPNSLVMLRPD--NNHQRMFNKNCFPVVDVVIDPHLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRVNSRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ P +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIYTVDQ------DHKVEEFIKS----PFYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKHIKFDLLICDEGHRLKNSTIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ + AS+ E+ R +L + +RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIIISRQPSASEEEKELGERRAAELTCLTGLFFLRRTQEVINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCQPGALQIELYRKLLNSQAVRFCLEGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ + ++ +E +N+ P Y + K S KL VL +L
Sbjct: 596 CLLFNSVKEKECSSTWDENEEKSLYEGLINVFPADYNPLLFTEK----ESGKLQVLTKLL 651
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
AVI ++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN K S
Sbjct: 652 AVIHELRPTEKVVLVSNYTQTLNILQEICKRHGYAYTRLDGQTPISQRQQIVDGFNSKYS 711
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 712 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 771
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K+ LS VVD FS+ EL++LF L E++ THD + C
Sbjct: 772 GTIEEKIYQRQISKQGLSGAVVDLTRTSEYMQFSVEELKNLFTLNESSHCITHDLLNCD- 830
Query: 684 CV-----NGIQVKPPPLESDC----------------TDDLSCWHHVT-EKRWLVDPILK 721
C G ++ P+ +C L W H + + L DP L+
Sbjct: 831 CTGEQDHTGDSLEKFPISRNCQLGPHHQKFNSLKPLSMSQLKQWQHFSGDHVNLTDPFLE 890
Query: 722 HCWGAGVSFVF 732
VSF F
Sbjct: 891 RI-RENVSFFF 900
>gi|326917893|ref|XP_003205229.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Meleagris gallopavo]
Length = 918
Score = 475 bits (1222), Expect = e-131, Method: Compositional matrix adjust.
Identities = 266/615 (43%), Positives = 378/615 (61%), Gaps = 38/615 (6%)
Query: 88 STKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNIL 147
STK + +RK H+P N+LV+ P ++H + V VVVDP ++N L
Sbjct: 246 STKENILLNSQSRKPRHNPNDANSLVMPRPN--ASHQCMFNKAGLPVVDVVVDPYIANNL 303
Query: 148 RPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLID 206
RPHQREG+ F+YECV G+R+ +G I+ADEMGLGKTLQCI+L+WTLLRQG KP++
Sbjct: 304 RPHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVLK 363
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+A+IV P SLVKNW E KWLG R+ +D D+K+ F+ + P+ ++
Sbjct: 364 RALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQ------DHKVEEFISS----PLYSVM 413
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
+ISYE + E L++CDEGHRLKN +T AL L +RR++L+GTPIQND
Sbjct: 414 IISYEMLLRSLDQIQDIEFNLLICDEGHRLKNSSIKTTTALTSLSCERRIILTGTPIQND 473
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E+++L+ FVN G+LG+ +RK YE PI+R ++ A+ E+ +R +L +
Sbjct: 474 LQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLF 533
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG-ENTKLGMTAL 444
++RRT ++ K+LP K E ++ + T LQ ELY L+ S + ++G EN+ L
Sbjct: 534 VLRRTQEVIDKFLPPKKENIIFCQPTALQLELYRKLLSSRVITSCLQGRLENS----PHL 589
Query: 445 SSITSLKKLCNHPDLVMDKIQ-----------TGADGFENAMNILPTGYAASYKSGKLLI 493
I +LKKLCNHP L+ ++ + +E ++ P Y + S
Sbjct: 590 ICIGALKKLCNHPCLLFKAVKEKSCDPKSDEHVESSLYEGLTDVFPQDYTSDIFSET--- 646
Query: 494 ELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
S KL VL +LA I+ +++ +++VLVSNYTQTL++ + K GY Y RLDG+ + +
Sbjct: 647 -DSGKLQVLVKLLAAIRELSSSERVVLVSNYTQTLNILQETCKRYGYSYTRLDGNTPVSQ 705
Query: 553 RAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R ++V++FN K S FIF+LSSKAGG GLNL+GA+ L+++D DWNPA D QAMARVWRDG
Sbjct: 706 RQQIVDSFNCKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDG 765
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEEN 670
QK +YR L+TGSIEEK+ QRQ K+ LS VVD + HFS+ EL++LF L EN
Sbjct: 766 QKHTVHIYRLLTTGSIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELKNLFTLHEN 825
Query: 671 TISDTHDKIKCSRCV 685
+ THD ++C CV
Sbjct: 826 SSCVTHDLLECD-CV 839
>gi|345327482|ref|XP_001506039.2| PREDICTED: hypothetical protein LOC100074424 [Ornithorhynchus
anatinus]
Length = 1623
Score = 474 bits (1221), Expect = e-131, Method: Compositional matrix adjust.
Identities = 291/704 (41%), Positives = 409/704 (58%), Gaps = 65/704 (9%)
Query: 69 QILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKI 128
Q + KPF P N + +TK ++ K HDP APNA V+ P + H +
Sbjct: 831 QCVLKPFCSPTRNISET--NTKQNILKDSQMVKPRHDPNAPNAFVMPRPAK--NHQWMFN 886
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
V VVVDP L N LRPHQ+EG+ F++ECV G+R+ +G I+ADEMGLGKTLQCI
Sbjct: 887 RSGLPLVDVVVDPYLVNHLRPHQKEGILFLFECVMGMRVNGRFGAILADEMGLGKTLQCI 946
Query: 189 TLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEID 246
+L+WTLLRQGP KP+I + ++V P SLV NW E KWLG R+ +D +
Sbjct: 947 SLIWTLLRQGPYGGKPIIKQTLVVTPGSLVNNWKKEFQKWLGTERIKVFSVDQ------E 1000
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+K+ F+++ P +L+ISYE + + L++CDEGHRLKN +T AL
Sbjct: 1001 HKVEEFIKS----PFYSVLIISYEMLLRSLDQIKNIDFNLLICDEGHRLKNNSIKTTTAL 1056
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
+ L RR++L+GTP+QNDL E+++L+ FVN GILG+ +RK YE PI+R ++ A+
Sbjct: 1057 ISLSCDRRIILTGTPVQNDLQEFYALIEFVNPGILGSLSTYRKIYEEPIIRSREPSATRE 1116
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E+ +R +L + ++RRT +++KYLP K E VV + LQ ELY L+ S A
Sbjct: 1117 EKELGEKRAAELTRLTGLFILRRTQEVINKYLPPKIESVVFCRPAALQIELYRKLLNSRA 1176
Query: 427 VRRTMKGG-ENTKLGMTALSSITSLKKLCNHPDLVMDKIQ-----TGADGFENA------ 474
+ ++G EN+ L I +LKKLCNHP L+ I+ + DGFE
Sbjct: 1177 ISFCLQGMLENS----PHLVCIGALKKLCNHPCLLFKAIKEKECNSTHDGFEETNLYEGL 1232
Query: 475 MNILPTGYAASYKSGKLLIEL-SAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFER 532
+++ P Y S E+ S KL VL +LAVI+ ++ +K+VLVSNYTQTL + +
Sbjct: 1233 IDVFPPDY-----SPVTFPEVDSGKLRVLIKLLAVIRELSPSEKVVLVSNYTQTLTILQE 1287
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
+ K GY + RLDG I +R +++ FN K S +F+F+LSSKAGG GLNL+G + L+++
Sbjct: 1288 ICKRYGYAHTRLDGQTPISQRQHIIDGFNSKHSPDFVFLLSSKAGGVGLNLVGGSHLILY 1347
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
D DWNPA D QAMARVWRDGQK+P +YR L+TG+IEEK+ QRQ K++LS VVD +
Sbjct: 1348 DIDWNPATDIQAMARVWRDGQKRPVHIYRLLTTGTIEEKIYQRQISKQSLSGTVVDLTKA 1407
Query: 652 VAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN----------------GIQVKPPP 694
HFS+ EL+++F L E++ THD + C CV Q+ P
Sbjct: 1408 SEHIHFSVEELKNVFTLHEDSNCVTHDLLDCD-CVEREVRQADSLGKVSTYRSCQLGPHS 1466
Query: 695 LESDCTDDLSC-----WHHVT-EKRWLVDPILKHCWGAGVSFVF 732
+ + LS W H + E + L DP LK VSF+F
Sbjct: 1467 QQPNSKKPLSMSQLKQWKHFSGEDQDLTDPFLKRVQD-NVSFIF 1509
>gi|334326071|ref|XP_001379449.2| PREDICTED: DNA repair and recombination protein RAD54B [Monodelphis
domestica]
Length = 827
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 287/706 (40%), Positives = 398/706 (56%), Gaps = 55/706 (7%)
Query: 69 QILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKI 128
QI KPF P+ N +T+ + K HDP A N+ V+ P + +H +
Sbjct: 139 QITQKPFSNPVKNICKS--NTEEKNIDDSSNFKPRHDPYAQNSFVMPRPDK--SHQWIFN 194
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
V VVVDP L + LRPHQ+EG+ F+YECV G+R+ +G I+ADEMGLGKTLQCI
Sbjct: 195 KNCLPLVDVVVDPYLVHHLRPHQKEGIVFLYECVMGMRMNGRFGAILADEMGLGKTLQCI 254
Query: 189 TLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEID 246
+L+WTLLRQG KP+I K +IV P SLV NW E KWLG R+ +D K E
Sbjct: 255 SLIWTLLRQGLYGGKPIIKKTLIVTPGSLVTNWRKEFQKWLGTERIKVFTLDQAHKIE-- 312
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
F+ + P+ +L+ISYE + + L++CDEGHRLKN +T AL
Sbjct: 313 ----DFIIS----PLYSVLIISYEMLLRCLDQIKNIKFDLLICDEGHRLKNSSIKTTTAL 364
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
+ L ++RV+L+GTP+QNDL E+++L+ FVN GILG+ +RK YE PI+ ++ A+
Sbjct: 365 VSLSCEKRVILTGTPVQNDLQEFYALIEFVNPGILGSLSSYRKIYEEPIIISREPSATQE 424
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E+ +R +L + ++RRT +++KYLP K E V+ + LQ ELY L+ S A
Sbjct: 425 EKKLGEKRAAELTRLTGLFILRRTQEVINKYLPPKIESVIFCRPGILQIELYRKLLSSQA 484
Query: 427 VRRTMKGG-ENTKLGMTALSSITSLKKLCNHPDLVMDKIQ-----TGADGFE--NAMNIL 478
VR ++G EN L I +LKKLCNHP L+ ++ + ++ +E N L
Sbjct: 485 VRFCLQGILENAP----HLLCIGALKKLCNHPCLLFKSLKEKENNSSSEQYEEYNFSEGL 540
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLR 537
Y A Y S KL VL +LA I+ ++ +K+VLVSNYTQTL++ + +
Sbjct: 541 IDAYPADYNPNTFSETDSGKLQVLTKLLAAIRELSPSEKVVLVSNYTQTLNILQAVCTRH 600
Query: 538 GYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
GY RLDG + +R ++V+ FN K S+ FIF+LSSKAGG GLNLIG + L+++D DWN
Sbjct: 601 GYTCTRLDGQTPVVQRQQIVDGFNCKHSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWN 660
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-H 655
PA D QAMARVWRDGQK +YR L+TG+IEEK+ QRQ K+ LS VVD +
Sbjct: 661 PATDIQAMARVWRDGQKHSVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLAKTSEHIQ 720
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT--------------- 700
FS+ EL++LF L E++ THD + C CV + + LE T
Sbjct: 721 FSVEELKNLFTLHEDSDCVTHDLLDC-ECVEKKEHQAESLEEPSTYRSCQLGPNHQKLDS 779
Query: 701 ------DDLSCWHHVTEKRW-LVDPILKHCWGAGVSFVFYQHSTKA 739
L W H + K L DP L+ VSF+F + +A
Sbjct: 780 KKPLSMSQLKQWKHFSGKHQNLHDPFLERI-KENVSFIFQNVTNQA 824
>gi|395818192|ref|XP_003782520.1| PREDICTED: DNA repair and recombination protein RAD54B [Otolemur
garnettii]
Length = 910
Score = 474 bits (1219), Expect = e-130, Method: Compositional matrix adjust.
Identities = 265/597 (44%), Positives = 362/597 (60%), Gaps = 36/597 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP N+LV+ P + H + V VV+DP L LRPHQ+EGV F+YE
Sbjct: 253 KPRHDPHTSNSLVMPRPDK--NHQWMFNKNCFPLVDVVIDPYLVCHLRPHQKEGVVFLYE 310
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ YG I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 311 CVMGMRMNGRYGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 370
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F++ +L+ISYE
Sbjct: 371 WRKEFQKWLGSERIKIFTVDQ------DHKVEEFIKV----TFYSVLIISYEMLLRSLDQ 420
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++LSGTP+QNDL E+F+L+ FVN
Sbjct: 421 VKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILSGTPVQNDLQEFFALIDFVNP 480
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +R+ YE PI+ ++ AS+ ++ R +L + ++RRT +++KYL
Sbjct: 481 GILGSLSSYRRIYEEPIILSREPSASEEDKNLGERRAAELTCLTGLFILRRTQEVINKYL 540
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E VV T LQ E+Y L+ S AVR ++G EN+ L I +LKKLCNHP
Sbjct: 541 PPKIENVVFCWPTALQIEIYRKLLNSQAVRFCLQGLENS----PHLICIGALKKLCNHPC 596
Query: 459 LVMDKIQ-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLA 507
L+ I+ + D +E +N+ P A Y + S KL VL +LA
Sbjct: 597 LLFSSIKEKECSSTCDENEERRLYEGLLNVFP----ADYNPLQFTEMESGKLQVLLKLLA 652
Query: 508 VIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSN 565
VI + +K+VLVSNYTQTL++ + + K GY Y RLDG I +R +V+ FN K S+
Sbjct: 653 VIHDLRPTEKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPIVQRQHIVDGFNSKHSS 712
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG
Sbjct: 713 DFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTG 772
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
+IEEK+ QRQ K+ LS V+D + FS+ EL++LF L E++ THD + C
Sbjct: 773 TIEEKIYQRQISKQGLSGAVIDLTKTSEHIQFSVEELKNLFTLHESSRCVTHDLLDC 829
>gi|291388286|ref|XP_002710621.1| PREDICTED: RAD54 homolog B [Oryctolagus cuniculus]
Length = 911
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 263/597 (44%), Positives = 361/597 (60%), Gaps = 35/597 (5%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K +DP PN+LV+ P + H + K V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRYDPYMPNSLVMPQPDK--NHQWMFNKKCFPLVDVVIDPHLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R++ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+Q +L+ISYE
Sbjct: 370 WRKEFQKWLGSERIKIFTVDQ------DHKVEEFVQCM----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIIVSREPSASEEEKKLGERRAAELTCLTGLFVLRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E VV + LQ ELY L+ S AVR ++G + L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQAVRFCLQGLSESS---PHLLCIGALKKLCNHPC 596
Query: 459 LVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLA 507
L+ + ++ +N+ P A Y E S KL VL +LA
Sbjct: 597 LLFSTAKEKESSSSCNEDEERSLYKGLLNVFP----ADYNPLLFTEEESGKLQVLSKLLA 652
Query: 508 VI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSN 565
VI ++ +K+VLVSNYTQTL++ + + K GY + RLDG I +R ++V+ FN K S+
Sbjct: 653 VIHELRPTEKVVLVSNYTQTLNILQEVCKRHGYAHTRLDGQTPISQRQQIVDGFNSKYSS 712
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG
Sbjct: 713 DFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTG 772
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
+IEEK+ QRQ K+ LS VVD + FS+ EL++LF L EN+ THD + C
Sbjct: 773 TIEEKIYQRQISKQGLSGAVVDLSKTSEHIQFSVEELKNLFTLHENSDCVTHDLLDC 829
>gi|169598354|ref|XP_001792600.1| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
gi|160704380|gb|EAT90191.2| hypothetical protein SNOG_01979 [Phaeosphaeria nodorum SN15]
Length = 1307
Score = 473 bits (1218), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/616 (43%), Positives = 368/616 (59%), Gaps = 45/616 (7%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ 134
FK P+L+ T L R + HDP PNALV+ P K K
Sbjct: 204 FKTPLLSNT-------VLPQRNSSIPQPRHDPNLPNALVMKRPESAP--------KGKQI 248
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VVVDPVLS LR HQREGVKF+YECV G+R E G IMADEMGLGKTLQ ITL+WTL
Sbjct: 249 VDVVVDPVLSKHLRDHQREGVKFLYECVMGMRCE-GEGAIMADEMGLGKTLQTITLLWTL 307
Query: 195 LRQGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSF 252
++Q P+ ++P++ KA++V P+ LV NW E KWLG + + G D K+ +F
Sbjct: 308 MKQNPIHESQPIVKKALVVCPAGLVDNWKREFRKWLGNERIGVFVANGK----DKKITNF 363
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKA 311
T G+ +++I YE R+ L K V +V+ DEGHRLK ++ A+ L
Sbjct: 364 --TMGK--AYNVMIIGYEMLRTVQEELKKGSGVDIVIADEGHRLKTANNKAMLAIQSLNT 419
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
+RR++LSGTP+QNDL E+++ + FVN G+LG F++ +E PILR + AS++E K
Sbjct: 420 ERRIILSGTPLQNDLGEFYTAIDFVNPGLLGQRSAFKRTFEAPILRSRQPEASESELEKG 479
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
R ++L+ + +R +IRRT+ +LSKYLP KTE +V K T Q E Y ++ S +
Sbjct: 480 EARWKELVSLTSRFMIRRTAEVLSKYLPSKTEHIVFCKPTKAQAEAYRAILSSPFFSVAV 539
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLV---MDKIQTGADGFENAMNILPTGYAASYKS 488
G + AL I LKK+CN P L+ D T ++ + + ++P S+ S
Sbjct: 540 GGNMD-----MALQLIMVLKKVCNSPSLIKTTKDGEATPSEMLQALLPLVPPHVLNSHAS 594
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
S KL +LD+++ I TT++KIV+VSNYT TLD+ ER+ Y Y+RLDGS
Sbjct: 595 -------STKLRLLDSLVHRIHTTTEEKIVIVSNYTTTLDMIERMLVSLSYTYLRLDGST 647
Query: 549 TIKKRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
KR +VE FNKT + F F+LS+K+GG GLNLIGA+R+V+FD DWNPA D QAMAR
Sbjct: 648 PSNKRQALVEKFNKTPKAASFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMAR 707
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
+ RDGQK P +YRFL G I+EK+ QRQ K L++ VVD + A FS ELR LF+
Sbjct: 708 IHRDGQKLPVKIYRFLVKGGIDEKIYQRQVMKMGLANAVVDNKAS-ASSFSKDELRDLFR 766
Query: 667 LEENTISDTHDKIKCS 682
L+E THD + C+
Sbjct: 767 LDEREGCQTHDLLGCT 782
>gi|451845347|gb|EMD58660.1| hypothetical protein COCSADRAFT_264941 [Cochliobolus sativus
ND90Pr]
Length = 889
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 286/666 (42%), Positives = 394/666 (59%), Gaps = 50/666 (7%)
Query: 26 PVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGG 85
P+++ KR KPL SV + + KE + E++ + + FK P+L
Sbjct: 146 PIQQPKRPEPGHKPLLSVKPNSKKGQETADDKEIVPEYK--LSAYRKQQFKAPLL----- 198
Query: 86 GYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSN 145
ST + R + HDP APNAL++ P K K V VVVDPVLS
Sbjct: 199 --STTVMPQRNPSIPQPRHDPNAPNALIMKRPDSCP--------KGKQIVDVVVDPVLSK 248
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKP 203
LR HQREGV+F+YECV G+R E G IMADEMGLGKTLQ ITL+WTL++Q P+ + P
Sbjct: 249 HLRDHQREGVQFLYECVMGMRCE-GEGAIMADEMGLGKTLQTITLLWTLMKQNPIHDSPP 307
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
LI KA+IV P+ LV NW E KWLG RV +D +K K+ +F T G+
Sbjct: 308 LIKKALIVCPAGLVDNWKREFRKWLGNERVGVFVLDAKNK-----KIANF--TMGKS--Y 358
Query: 263 PILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
I+++ YE R L K V +V+ DEGHRLK ++ A+ L +RR++LSGTP
Sbjct: 359 NIMIVGYEMLRIVQEELKKGSGVDIVIADEGHRLKTASNKAMLAIQSLNTERRIILSGTP 418
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QNDL E+++ + FVN G+LG F++ +E PI+R + AS+AE K R ++L+ +
Sbjct: 419 LQNDLGEFYTAIDFVNPGLLGQRSAFKRSFELPIMRSRQPDASEAELEKGEARWKELVSL 478
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
++ +IRRT+ +LSKYLP KTE +V + T Q E Y ++ S R + +
Sbjct: 479 TSQFMIRRTAEVLSKYLPPKTEHIVFCRPTKGQAETYRAILGSPTFRLALGSTD------ 532
Query: 442 TALSSITSLKKLCNHPDLV---MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAK 498
AL I LKK+CN P L+ D T ++ ++ + ++P+ +S S SAK
Sbjct: 533 IALQLINVLKKVCNSPSLLKSSKDNDDTPSEMLQSIIPLIPSKILSSSAS-------SAK 585
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
L +LD+++ I TT++KIV+VSNYT TLD+ ERL Y ++RLDGS KR +VE
Sbjct: 586 LRLLDSLIHSIYTTTEEKIVIVSNYTTTLDMIERLLVSLSYTFLRLDGSTPASKRQSLVE 645
Query: 559 TFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
FNKT + F F+LS+K+GG GLNLIGA+R+V+FD DWNPA D QAMAR+ RDGQK PC
Sbjct: 646 KFNKTPKTTSFAFLLSAKSGGVGLNLIGASRIVLFDIDWNPATDLQAMARIHRDGQKLPC 705
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
VYRFL G ++EK+ QRQ K L++ VVD + A FS ELR LF+L+E TH
Sbjct: 706 KVYRFLVQGGLDEKIYQRQVMKMGLANAVVDNKAS-ASSFSQEELRDLFRLDEREGCQTH 764
Query: 677 DKIKCS 682
D + C+
Sbjct: 765 DLLGCT 770
>gi|260802348|ref|XP_002596054.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
gi|229281308|gb|EEN52066.1| hypothetical protein BRAFLDRAFT_202887 [Branchiostoma floridae]
Length = 791
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 271/627 (43%), Positives = 368/627 (58%), Gaps = 41/627 (6%)
Query: 73 KPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDK 132
KPF P+ + A G DPTA LV+ P AH +
Sbjct: 107 KPFTNPMKDKQAATQRKSAGGSGAPQTVAPRFDPTAEGVLVMPRPS--PAHQWKYNPAGQ 164
Query: 133 IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VVVDP LS LRPHQR+G+ F+Y CV G+R G I+AD MGLGKTLQCIT++W
Sbjct: 165 PLVDVVVDPHLSRHLRPHQRDGIIFLYLCVMGMRDHPGLGAILADSMGLGKTLQCITMIW 224
Query: 193 TLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG---RVAALPIDGGSKAEIDNK 248
TLL+QGP KP++ + +IV P SLVKNW E KWLG +V A+ G + +D
Sbjct: 225 TLLKQGPYGGKPVLHRILIVTPGSLVKNWVKEFKKWLGNERCKVYAV----GQDSRVDE- 279
Query: 249 LNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
+ R P+ P+++ISYE + + K L++CDEGHRLKN +T ++ G
Sbjct: 280 -------FARSPLYPVMIISYEMLVRYVRDIEKINFDLIVCDEGHRLKNTNIKTTSSISG 332
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L A+RR++L+GTPIQNDL E S+V F N G+LG FRK YE PI+R A++AE+
Sbjct: 333 LSARRRIVLTGTPIQNDLQELHSIVDFCNPGVLGPITAFRKVYEEPIVRSHQPGATEAEK 392
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
T R E+L + + +RRT + +KYLP K E VV + T LQ ++Y L+ S ++
Sbjct: 393 TLGATRAEELSRLTGQFTLRRTEDVNNKYLPPKVEAVVFCRPTPLQLDIYRKLLCSRVLK 452
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD---GFE--------NAMNI 477
+ T G L I++LKKLCN P L+ + G D GF+ + +++
Sbjct: 453 SFLYSNRPTD-GSLHLMCISALKKLCNDPCLIYTAAKEGEDELFGFDQGEESIYKDVLSL 511
Query: 478 LPTGYAASYKSGKLLIELSAKLMVL-DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
P GY + S E S KL VL D + ++ ++IV+VSNYTQTLD+ + +
Sbjct: 512 FPRGYDPNSSSP----EYSGKLQVLADLLGSLYSEGPRERIVVVSNYTQTLDMVQ----V 563
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
R Y Y+RLDGS KR ++VE FN K +F+F+LS+KAGG GLNLIGA+RLV++D DW
Sbjct: 564 R-YGYLRLDGSTPTGKRQQIVERFNDKYCRDFVFLLSTKAGGVGLNLIGASRLVLYDIDW 622
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPAND QAMARVWRDGQ + +YR ++TG+IEEK+ QRQ K+ LS VVD +
Sbjct: 623 NPANDLQAMARVWRDGQPRVVHIYRLITTGTIEEKIYQRQISKQGLSGAVVDAKSSSKVQ 682
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCS 682
FS +L+ LF L E+T S THD + C+
Sbjct: 683 FSAEDLKDLFTLHEDTDSVTHDLLDCA 709
>gi|453087791|gb|EMF15832.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 978
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/593 (43%), Positives = 359/593 (60%), Gaps = 36/593 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
H+P APNAL++ P + K K V VVVDP+L+ LRPHQR+GV+FMYECV
Sbjct: 250 HNPDAPNALIMRRPS--------GVPKGKQIVDVVVDPLLTRSLRPHQRQGVQFMYECVM 301
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G++ D G I+ADEMGLGKTLQ I L+WTLL+Q P+A P+I KA+IV P SLVKNW
Sbjct: 302 GMKDYDGEGAILADEMGLGKTLQTIALLWTLLKQNPIADAPPVIKKALIVCPVSLVKNWH 361
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETF-RSHASVL 279
E KWLG R+ ++ G +L F T G+ +++I YE + +
Sbjct: 362 KEFNKWLGNDRIGVYMVENGKM-----RLTDF--TKGK--AYHVMIIGYEKLTKVQKELQ 412
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ + +V+CDEGHRLK ++ A+ L +RRV+LSGTP+QNDL E++++V FVN
Sbjct: 413 GASGIDIVICDEGHRLKTSTNKAASAIKTLSTERRVILSGTPVQNDLAEFYTMVDFVNPN 472
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
IL F++++ETPI++ + A++ + K R E+L + + ++RRT+ +L KYLP
Sbjct: 473 ILSKYTTFKREFETPIMKSRQPGAAEKDLEKGEARSEELANLTGKFILRRTAEILDKYLP 532
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE VV + TD Q+++Y +I + A + +L I LKK+CN P L
Sbjct: 533 PKTEYVVFCRPTDAQRQIYRTIISTQAFATALNS------PAVSLELIMILKKVCNSPSL 586
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
++ T G E G S SAK+ VLD +L IK TDDK+VL
Sbjct: 587 LLG---TNVKGEEIKRPEFIEGIPRKLLSTP---AASAKIQVLDELLVKIKNETDDKVVL 640
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFMLSSKAGG 577
VSNYT T+D+ L G Y+RLDGS KR +V+ FN++ SN FIF+LS+KAGG
Sbjct: 641 VSNYTSTMDILAALITSLGMSYLRLDGSTPQSKRQDMVDRFNRSSQSNSFIFLLSAKAGG 700
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
G+NLIGA+RL+M+D DWNPA D QAMAR+ RDGQKKPCF+YRF++ G+++EK+ QRQ
Sbjct: 701 TGINLIGASRLIMYDLDWNPALDLQAMARIHRDGQKKPCFIYRFVTQGAMDEKIFQRQVT 760
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQV 690
K L+ +VD + A FS +ELR LF L+E TH + C NG+ +
Sbjct: 761 KTGLADSIVDGKA-AASGFSTAELRDLFSLDEEDDCQTHRLLGCECERNGLPI 812
>gi|300795783|ref|NP_001178684.1| fibrinogen silencer-binding protein [Rattus norvegicus]
Length = 888
Score = 472 bits (1214), Expect = e-130, Method: Compositional matrix adjust.
Identities = 273/617 (44%), Positives = 367/617 (59%), Gaps = 39/617 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K +DP PNALV+ P + +H V VV+DP L LRPHQ++GV F+YE
Sbjct: 232 KPRYDPYTPNALVMPRPDK--SHQWAFNRSCLPTVDVVIDPHLVRHLRPHQKDGVAFLYE 289
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R G I+ADEMGLGKTLQCI+L+WTL QGP KP++ + +IV P SLV N
Sbjct: 290 CVMGMRAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKRTLIVTPGSLVNN 349
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+ + + +L+ISYE
Sbjct: 350 WRKEFQKWLGSERIKIFTVDQ------DHKVEEFINS----AFHSVLIISYEMLLRSLDR 399
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ GL++CDEGHRLKN +T AL L ++RV+L+GTP+QNDL E+F+LV FVN
Sbjct: 400 IKTITFGLLICDEGHRLKNSGIKTTAALSSLSCEKRVILTGTPVQNDLQEFFALVDFVNP 459
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +R+ YE PI+ ++ AS ER R +L + ++RRT +++KYL
Sbjct: 460 GILGSLSSYRRIYEEPIVMSREPSASKEERELGERRTTELTRLTGCFILRRTQEVINKYL 519
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S +VR ++G LG +A L I +LKKLCNHP
Sbjct: 520 PPKIENVVFCRPGALQIELYRKLLSSQSVRFCLQG----LLGNSAHLICIGALKKLCNHP 575
Query: 458 DLVMDKI---QTGADGFENAMNILPTGYAASYKSGKLLIEL----SAKLMVLDTMLAVI- 509
L+ + + + EN L G + +G L++L S KL VL +LA I
Sbjct: 576 RLLFSFVKGKEFNSSRDENEERSLCQGLLTVFPAGYNLLQLSESESGKLQVLVKLLAAIS 635
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K++LVSNY QTL+L E + K GY RLDG + +R ++V+ FN K S +FI
Sbjct: 636 ELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFI 695
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAMARVWRDGQK P VYR L+TG+IE
Sbjct: 696 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHPVHVYRLLTTGTIE 755
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
EK+ QRQ K+ LS VVD + FS+ EL++LF L EN+ THD + C C
Sbjct: 756 EKIYQRQISKQGLSGAVVDLTRSSEQIQFSVEELKNLFTLHENSHCVTHDLLDC-ECTG- 813
Query: 688 IQVKPPPLESDCTDDLS 704
E D +DD S
Sbjct: 814 --------EKDHSDDAS 822
>gi|149045437|gb|EDL98437.1| similar to RAD54B homolog isoform 1; RAD54, S. cerevisiae, homolog
of, B (predicted), isoform CRA_b [Rattus norvegicus]
Length = 819
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 267/594 (44%), Positives = 360/594 (60%), Gaps = 29/594 (4%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K +DP PNALV+ P + +H V VV+DP L LRPHQ++GV F+YE
Sbjct: 163 KPRYDPYTPNALVMPRPDK--SHQWAFNRSCLPTVDVVIDPHLVRHLRPHQKDGVAFLYE 220
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R G I+ADEMGLGKTLQCI+L+WTL QGP KP++ + +IV P SLV N
Sbjct: 221 CVMGMRAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPIVKRTLIVTPGSLVNN 280
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+ + + +L+ISYE
Sbjct: 281 WRKEFQKWLGSERIKIFTVDQ------DHKVEEFINS----AFHSVLIISYEMLLRSLDR 330
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ GL++CDEGHRLKN +T AL L ++RV+L+GTP+QNDL E+F+LV FVN
Sbjct: 331 IKTITFGLLICDEGHRLKNSGIKTTAALSSLSCEKRVILTGTPVQNDLQEFFALVDFVNP 390
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +R+ YE PI+ ++ AS ER R +L + ++RRT +++KYL
Sbjct: 391 GILGSLSSYRRIYEEPIVMSREPSASKEERELGERRTTELTRLTGCFILRRTQEVINKYL 450
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S +VR ++G LG +A L I +LKKLCNHP
Sbjct: 451 PPKIENVVFCRPGALQIELYRKLLSSQSVRFCLQG----LLGNSAHLICIGALKKLCNHP 506
Query: 458 DLVMDKI---QTGADGFENAMNILPTGYAASYKSGKLLIEL----SAKLMVLDTMLAVI- 509
L+ + + + EN L G + +G L++L S KL VL +LA I
Sbjct: 507 RLLFSFVKGKEFNSSRDENEERSLCQGLLTVFPAGYNLLQLSESESGKLQVLVKLLAAIS 566
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K++LVSNY QTL+L E + K GY RLDG + +R ++V+ FN K S +FI
Sbjct: 567 ELRPTEKVILVSNYRQTLNLLEEVCKCHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFI 626
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAMARVWRDGQK P VYR L+TG+IE
Sbjct: 627 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMARVWRDGQKHPVHVYRLLTTGTIE 686
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC 681
EK+ QRQ K+ LS VVD + FS+ EL++LF L EN+ THD + C
Sbjct: 687 EKIYQRQISKQGLSGAVVDLTRSSEQIQFSVEELKNLFTLHENSHCVTHDLLDC 740
>gi|88319960|ref|NP_001034645.1| DNA repair and recombination protein RAD54B isoform 1 [Mus
musculus]
gi|51316246|sp|Q6PFE3.1|RA54B_MOUSE RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|34785459|gb|AAH57604.1| RIKEN cDNA E130016E03 gene [Mus musculus]
Length = 886
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 292/705 (41%), Positives = 396/705 (56%), Gaps = 59/705 (8%)
Query: 68 RQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLK 127
R+ + PFK ST+A G R R H+P PNALV+ P + H +
Sbjct: 205 RKCFSNPFKSVC-------QSTQAQGKRWNDCRPR-HNPCTPNALVMPRPDE--NHQRMF 254
Query: 128 IDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
V VV+DP L + LRPHQ++G+ F+YECV G+R G I+ADEMGLGKTLQC
Sbjct: 255 NRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGAILADEMGLGKTLQC 314
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI 245
I+L+WTL QGP KP+I K +IV P SLV NW E KWLG R+ +D
Sbjct: 315 ISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQ------ 368
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
D+K+ F+ + + +L+ISYE + GL++CDEGHRLKN +T A
Sbjct: 369 DHKVEEFINST----FHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTA 424
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L L ++ V+L+GTP+QNDL E+F+LV FVN GILG+ +RK YE PI+ ++ +S
Sbjct: 425 LSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSK 484
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
ER R +L + R ++RRT +++KYLP K E VV + LQ ELY L++S
Sbjct: 485 EERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQ 544
Query: 426 AVRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKI---QTGADGFENAMNILPTG 481
+VR ++G EN+ L I +LKKLCNHP L+ + + + EN L G
Sbjct: 545 SVRFCLQGLLENS----AHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQG 600
Query: 482 ----YAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKL 536
+ A Y + E S KL VL +LAVI ++ +K++LVSNY QTL++ E + K
Sbjct: 601 LLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKR 660
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
GY RLDG + +R +V++FN K S +FIF+LSSKAGG GLNLIG + L+++D DW
Sbjct: 661 HGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDW 720
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR- 654
NPA D QAM+RVWRDGQK P +YR L+TG+IEEK+ QRQ K+ LS VVD
Sbjct: 721 NPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHI 780
Query: 655 HFSMSELRSLFQLEENTISDTHDKIKCSRC--------------VNGIQVKPPPLESDCT 700
FS+ EL++LF L E++ THD + C C V Q + P +SD
Sbjct: 781 QFSVEELKNLFTLHESSHCVTHDLLDC-ECTGEKGHTEDASEGPVASRQCQFGPQKSDAL 839
Query: 701 DDLSC-----WHHVTEKRW-LVDPILKHCWGAGVSFVFYQHSTKA 739
LS W H + L DP L+ VSF F + +A
Sbjct: 840 RPLSMSQLKQWKHFSGDHLNLPDPFLERI-RENVSFFFQNITNQA 883
>gi|148673695|gb|EDL05642.1| mCG142038, isoform CRA_b [Mus musculus]
Length = 886
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 292/705 (41%), Positives = 396/705 (56%), Gaps = 59/705 (8%)
Query: 68 RQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLK 127
R+ + PFK ST+A G R R H+P PNALV+ P + H +
Sbjct: 205 RKCFSNPFKSVC-------QSTQAQGKRWNDCRPR-HNPCTPNALVMPRPDE--NHQRMF 254
Query: 128 IDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
V VV+DP L + LRPHQ++G+ F+YECV G+R G I+ADEMGLGKTLQC
Sbjct: 255 NRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGAILADEMGLGKTLQC 314
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI 245
I+L+WTL QGP KP+I K +IV P SLV NW E KWLG R+ +D
Sbjct: 315 ISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVDNWRKEFQKWLGSERIKIFTVDQ------ 368
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
D+K+ F+ + + +L+ISYE + GL++CDEGHRLKN +T A
Sbjct: 369 DHKVEEFINST----FHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTA 424
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L L ++ V+L+GTP+QNDL E+F+LV FVN GILG+ +RK YE PI+ ++ +S
Sbjct: 425 LSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSK 484
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
ER R +L + R ++RRT +++KYLP K E VV + LQ ELY L++S
Sbjct: 485 EERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQ 544
Query: 426 AVRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKI---QTGADGFENAMNILPTG 481
+VR ++G EN+ L I +LKKLCNHP L+ + + + EN L G
Sbjct: 545 SVRFCLQGLLENS----AHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQG 600
Query: 482 ----YAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKL 536
+ A Y + E S KL VL +LAVI ++ +K++LVSNY QTL++ E + K
Sbjct: 601 LLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKR 660
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
GY RLDG + +R +V++FN K S +FIF+LSSKAGG GLNLIG + L+++D DW
Sbjct: 661 HGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDW 720
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR- 654
NPA D QAM+RVWRDGQK P +YR L+TG+IEEK+ QRQ K+ LS VVD
Sbjct: 721 NPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHI 780
Query: 655 HFSMSELRSLFQLEENTISDTHDKIKCSRC--------------VNGIQVKPPPLESDCT 700
FS+ EL++LF L E++ THD + C C V Q + P +SD
Sbjct: 781 QFSVEELKNLFTLHESSHCVTHDLLDC-ECTGEKGHTEDASEGPVASRQCQFGPQKSDAL 839
Query: 701 DDLSC-----WHHVTEKRW-LVDPILKHCWGAGVSFVFYQHSTKA 739
LS W H + L DP L+ VSF F + +A
Sbjct: 840 RPLSMSQLKQWKHFSGDHLNLPDPFLERI-RENVSFFFQNITNQA 883
>gi|45382655|ref|NP_990041.1| DNA repair and recombination protein RAD54B [Gallus gallus]
gi|51316526|sp|Q9DG67.1|RA54B_CHICK RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|9957289|gb|AAG09308.1|AF178529_1 Rad54b [Gallus gallus]
Length = 918
Score = 470 bits (1209), Expect = e-129, Method: Compositional matrix adjust.
Identities = 280/678 (41%), Positives = 397/678 (58%), Gaps = 62/678 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K H+P N+LV+ P ++H + V VVVDP ++N LRPHQREG+ F+YE
Sbjct: 259 KPRHNPNDTNSLVMPRPN--ASHQCMFNKAGLPVVDVVVDPYIANNLRPHQREGIVFLYE 316
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ +G I+ADEMGLGKTLQCI+L+WTLLRQG KP++ +A+IV P SLVKN
Sbjct: 317 CVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVLKRALIVTPGSLVKN 376
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+ + P+ +++ISYE
Sbjct: 377 WKKEFQKWLGSERIKVFTVDQ------DHKVEEFISS----PLYSVMIISYEMLLRSLDQ 426
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ E L++CDEGHRLKN +T AL L +RR++L+GTPIQNDL E+++L+ FVN
Sbjct: 427 IQAIEFNLLICDEGHRLKNSSIKTTTALTNLSCERRIILTGTPIQNDLQEFYALIEFVNP 486
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LG+ +RK YE PI+R ++ A+ E+ +R +L + ++RRT +++K+L
Sbjct: 487 GVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFILRRTQEVINKFL 546
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHP 457
P K E ++ + T LQ ELY L+ S + ++G EN+ L I +LKKLCNHP
Sbjct: 547 PPKKENIIFCQPTALQLELYRKLLSSRVISSCLQGRLENS----PHLICIGALKKLCNHP 602
Query: 458 DLVMDKIQ-----------TGADGFENAMNILPTGYAASYKSGKLLIEL-SAKLMVLDTM 505
L+ ++ + +E ++ P Y + S E+ S KL VL +
Sbjct: 603 CLLFKALKEKCCDPKSDEHVESSLYEGLTDVFPQDYTSDTFS-----EIDSGKLQVLVKL 657
Query: 506 LAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KT 563
LA I+ +++ +++VLVSNYTQTL++ K GY Y RLDG+ + +R ++V++FN K
Sbjct: 658 LAAIRELSSSERVVLVSNYTQTLNVLLETCKCYGYSYTRLDGNTPVSQRQQIVDSFNSKF 717
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
S FIF+LSSKAGG GLNL+GA+ L+++D DWNPA D QAMARVWRDGQK +YR L+
Sbjct: 718 SPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVHIYRLLT 777
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCS 682
TG+IEEK+ QRQ K+ LS VVD + HFS+ ELR+LF L EN+ THD ++C
Sbjct: 778 TGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHENSSCVTHDLLECD 837
Query: 683 RCVNGIQVKPP---PLESDCT-----------------DDLSCWHHVT-EKRWLVDPILK 721
N P P S C L W H + + + L DP L+
Sbjct: 838 CMGNKDHQNPSSKKPSVSRCCQLRQDQGKHNSKKPLSMSQLMQWKHFSGQHQALPDPFLE 897
Query: 722 HCWGAGVSFVFYQHSTKA 739
VSF+F Q+ T A
Sbjct: 898 RI-KENVSFIF-QNVTNA 913
>gi|344272964|ref|XP_003408298.1| PREDICTED: DNA repair and recombination protein RAD54B [Loxodonta
africana]
Length = 883
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/677 (41%), Positives = 385/677 (56%), Gaps = 59/677 (8%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K +DP APN+LV+ P + H + V VV+DP L LRPHQ+ GV F+YE
Sbjct: 225 KPRYDPYAPNSLVMPRPNK--NHQWIANKNCCPLVDVVIDPHLVCHLRPHQKGGVIFLYE 282
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R++ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 283 CVMGMRVDGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 342
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+ R P+ +L+ISYE
Sbjct: 343 WRKEFQKWLGSERIKIFTVDQ------DHKVEEFI----RSPLYSVLIISYEMLLRSLDQ 392
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 393 IKNIRFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 452
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 453 GILGSLSSYRKVYEEPIIISREPSASEEEKNLGVRRAAELTRLTGLFILRRTQEVINKYL 512
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S AVR ++G EN+ L I +LKKLCNHP
Sbjct: 513 PPKIENVVFCQPGALQIELYRKLLNSKAVRFCLQGLLENS----PHLICIGALKKLCNHP 568
Query: 458 DLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
L+ I+ +E +N+ P Y + K S KL VL +L
Sbjct: 569 CLLFRSIKEKECSPTCDENEERSLYEGLINVFPDDYNPLMFTEK----ESGKLQVLSKLL 624
Query: 507 AVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTS 564
VI ++ +K+VLVSNYT+TLD+ + + K GY + RLDG I +R +V+ FN K S
Sbjct: 625 EVIHELRPSEKVVLVSNYTKTLDILQEVCKRHGYAHTRLDGQTPISQRQHIVDGFNSKYS 684
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIF+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+T
Sbjct: 685 SDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTT 744
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCS- 682
G+IEEK+ QRQ K+ LS V+D + FS+ EL++LF L E++ THD + C
Sbjct: 745 GTIEEKIYQRQISKQGLSGAVMDLTKTSEHIQFSVEELKNLFTLHESSHCATHDLLDCDC 804
Query: 683 --------------RCVNGIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKH 722
Q+ P P +S+ LS W H L DP L+
Sbjct: 805 TGEKNHTDDSLGKLSVSRNCQLGPHPQKSNSLKPLSMSQLKQWKHFCADHLNLPDPFLER 864
Query: 723 CWGAGVSFVFYQHSTKA 739
VSF F + +A
Sbjct: 865 I-RENVSFFFQNITNQA 880
>gi|114620949|ref|XP_001142757.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 1
[Pan troglodytes]
gi|410225608|gb|JAA10023.1| RAD54 homolog B [Pan troglodytes]
gi|410256892|gb|JAA16413.1| RAD54 homolog B [Pan troglodytes]
gi|410338389|gb|JAA38141.1| RAD54 homolog B [Pan troglodytes]
Length = 910
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 388/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ + G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGSCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFI 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 834
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 835 EVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 893
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 ENVSFIFQNITTQA 907
>gi|449296175|gb|EMC92195.1| hypothetical protein BAUCODRAFT_569497 [Baudoinia compniacensis
UAMH 10762]
Length = 965
Score = 468 bits (1205), Expect = e-129, Method: Compositional matrix adjust.
Identities = 262/599 (43%), Positives = 363/599 (60%), Gaps = 40/599 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
H+P A ALV+ L + K K V VVVDP+L+ LR HQR GV F+YECV
Sbjct: 245 HNPHAEGALVM--------RRLKSVPKGKQIVDVVVDPILTKSLREHQRAGVAFLYECVM 296
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G++ D G I+ADEMGLGKTLQ I L+WTLL+Q P+ + P+I KA+IV P +L+ NW
Sbjct: 297 GMKQYDGEGAILADEMGLGKTLQTIALVWTLLKQNPVYQDAPVIKKALIVCPVTLINNWR 356
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
E TKWLG + + K +L F T GR +++I YE R L K
Sbjct: 357 KEFTKWLGKERVGVFVAESKK----TRLTDF--TMGRS--YSVMIIGYEKLRMVQEDLQK 408
Query: 282 NE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
+ +V+ DEGHRLK ++++ A+ LK RR++LSGTPIQNDL E+F++V FVN G+
Sbjct: 409 GSGIDIVIADEGHRLKTAQNKSALAIRSLKTDRRIILSGTPIQNDLAEFFTMVDFVNPGL 468
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
L F++++E PIL+ + AS + K R E+L + ++RRT+ +LSKYLP
Sbjct: 469 LNKYSVFKREFENPILKSRQPGASAKDVEKGEARSEELAKLTGMFILRRTAEILSKYLPP 528
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA--LSSITSLKKLCNHPD 458
KTE VV + T+ Q +Y +I S N LG +A L I LKK+CN P
Sbjct: 529 KTEYVVFCRPTEAQALVYRAIIGSPTF--------NAALGSSAVTLELINILKKVCNSPT 580
Query: 459 LVMDKIQTGADGFE-NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
L++ K G D + + +P+G + + S KL VLD++L I+ TT++K+
Sbjct: 581 LLLRKGDKGDDATKPELLGCVPSGLLRTPGA-------SGKLQVLDSLLHRIRTTTEEKV 633
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFMLSSKA 575
VLVSNYT T+D+ L Y+Y+RLDGS KR ++V+ FN++ SN F+F+LS+KA
Sbjct: 634 VLVSNYTATMDILGNLLSSLSYRYLRLDGSTPAGKRQELVDRFNRSPPSNSFVFLLSAKA 693
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RL++FD DWNPA D QAMARV RDGQK+PCF+YR ++ G+++EK+ QRQ
Sbjct: 694 GGVGLNLIGASRLILFDLDWNPATDLQAMARVHRDGQKRPCFIYRLVTQGALDEKIFQRQ 753
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
K L+ +VD + V+ F+ ELR LF L+E+ TH + CS NG V P P
Sbjct: 754 VSKTGLADSIVDGKSGVS-GFTREELRDLFSLDEDLDCQTHKLLGCSCGGNGTLVSPDP 811
>gi|297683312|ref|XP_002819327.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Pongo abelii]
Length = 910
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/673 (41%), Positives = 387/673 (57%), Gaps = 51/673 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F ++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFTKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTYDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFI 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKC------ 681
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD ++C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLECECAGEE 835
Query: 682 ---------SRCVNGIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWGA 726
S Q+ P +S+ LS W H + L DP L+
Sbjct: 836 VHTGDSLEKSIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-TE 894
Query: 727 GVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 895 NVSFIFQNITTQA 907
>gi|158261897|dbj|BAF83126.1| unnamed protein product [Homo sapiens]
Length = 910
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 387/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFI 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 834
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 835 EVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 893
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 ENVSFIFQNITTQA 907
>gi|402878733|ref|XP_003903027.1| PREDICTED: DNA repair and recombination protein RAD54B [Papio
anubis]
Length = 908
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 279/672 (41%), Positives = 389/672 (57%), Gaps = 51/672 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E V+ + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQ----TGADGFE--NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-K 510
L+ + I+ + D E + L + + A Y + S KL VL +LAVI +
Sbjct: 596 CLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHE 655
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIF 569
+ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FIF
Sbjct: 656 LRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIF 715
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEE
Sbjct: 716 LLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEE 775
Query: 630 KMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
K+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C +
Sbjct: 776 KIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGEV 834
Query: 689 ---------------QVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWGAG 727
Q+ P +S+ LS W H + L DP L+
Sbjct: 835 HTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-TEN 893
Query: 728 VSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 VSFIFQNITTQA 905
>gi|426360251|ref|XP_004047361.1| PREDICTED: DNA repair and recombination protein RAD54B [Gorilla
gorilla gorilla]
Length = 915
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 387/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 257 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 314
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 315 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 374
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 375 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 424
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 425 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 484
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 485 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 544
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 545 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 600
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 601 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 660
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 661 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFI 720
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 721 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 780
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 781 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 839
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 840 EVHTGNSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 898
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 899 ENVSFIFQNITTQA 912
>gi|6912622|ref|NP_036547.1| DNA repair and recombination protein RAD54B isoform 1 [Homo
sapiens]
gi|51316548|sp|Q9Y620.1|RA54B_HUMAN RecName: Full=DNA repair and recombination protein RAD54B; AltName:
Full=RAD54 homolog B
gi|4959396|gb|AAD34331.1|AF112481_1 RAD54B protein [Homo sapiens]
gi|12805023|gb|AAH01965.1| RAD54 homolog B (S. cerevisiae) [Homo sapiens]
gi|119612119|gb|EAW91713.1| hCG2009220, isoform CRA_c [Homo sapiens]
gi|261859006|dbj|BAI46025.1| RAD54 homolog B [synthetic construct]
Length = 910
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 387/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFI 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 834
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 835 EVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 893
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 ENVSFIFQNITTQA 907
>gi|296226943|ref|XP_002759149.1| PREDICTED: DNA repair and recombination protein RAD54B [Callithrix
jacchus]
Length = 910
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 280/673 (41%), Positives = 387/673 (57%), Gaps = 52/673 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 253 KPRHDPYMPNSLVMPRPDK--NHQRVFNKNCLPLVDVVIDPYLVYHLRPHQKEGIIFLYE 310
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 311 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 370
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +LVISYE
Sbjct: 371 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSV----FYSVLVISYEMLLRSLDQ 420
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + +++CDEGHRLKN +T AL+ L +R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 421 IKDIKFDILICDEGHRLKNSAIKTTTALISLSCDKRIILTGTPIQNDLQEFFALIDFVNP 480
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 481 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 540
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 541 PPKIENVVFCRPVALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 596
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 597 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 656
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +++VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 657 ELRPTERVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFI 716
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 717 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIE 776
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCV-- 685
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 777 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSLEELKNLFTLHESSSCVTHDLLDC-ECTGE 835
Query: 686 --NGIQVKPPPLESDCTDD----------------LSCWHHVT-EKRWLVDPILKHCWGA 726
G ++ + DC D L W H + + L DP L+
Sbjct: 836 VHTGDSLEKFIVSGDCQLDPHHQKSNSPKLLSMSQLKQWKHFSGDHSNLTDPFLERI-TE 894
Query: 727 GVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 895 NVSFIFQNITTQA 907
>gi|332238364|ref|XP_003268366.1| PREDICTED: DNA repair and recombination protein RAD54B [Nomascus
leucogenys]
Length = 911
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 386/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFI 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECAGE 834
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H L DP L+
Sbjct: 835 EVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFPGDHLNLTDPFLERI-T 893
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 ENVSFIFQNITTQA 907
>gi|355698101|gb|EHH28649.1| DNA repair and recombination protein RAD54B [Macaca mulatta]
Length = 908
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 279/673 (41%), Positives = 391/673 (58%), Gaps = 53/673 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E V+ + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQ----TGADGFE--NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-K 510
L+ + I+ + D E + L + + A Y + S KL VL +LAVI +
Sbjct: 596 CLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHE 655
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIF 569
+ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FIF
Sbjct: 656 LRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIF 715
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEE
Sbjct: 716 LLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEE 775
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
K+ QRQ K+ L VVD + + H FS+ EL++LF L E++ THD + C C
Sbjct: 776 KIYQRQISKQGLCGAVVDL-TNTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 833
Query: 688 I---------------QVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWGA 726
+ Q+ P +S+ LS W H + + DP L+
Sbjct: 834 VHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLKITDPFLERI-TE 892
Query: 727 GVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 893 NVSFIFQNITTQA 905
>gi|327532753|ref|NP_001192192.1| DNA repair and recombination protein RAD54B isoform 3 [Homo
sapiens]
gi|119612118|gb|EAW91712.1| hCG2009220, isoform CRA_b [Homo sapiens]
Length = 726
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 387/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 68 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 125
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 126 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 185
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 186 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 235
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 236 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 295
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 296 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 355
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 356 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENSP----HLICIGALKKLCNHP 411
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 412 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 471
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 472 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFI 531
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 532 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 591
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 592 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 650
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 651 EVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 709
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 710 ENVSFIFQNITTQA 723
>gi|109086956|ref|XP_001088870.1| PREDICTED: DNA repair and recombination protein RAD54B isoform 2
[Macaca mulatta]
Length = 908
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/672 (41%), Positives = 389/672 (57%), Gaps = 51/672 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E V+ + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQ----TGADGFE--NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-K 510
L+ + I+ + D E + L + + A Y + S KL VL +LAVI +
Sbjct: 596 CLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHE 655
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIF 569
+ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FIF
Sbjct: 656 LRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIF 715
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEE
Sbjct: 716 LLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEE 775
Query: 630 KMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
K+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C +
Sbjct: 776 KIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGEV 834
Query: 689 ---------------QVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWGAG 727
Q+ P +S+ LS W H + + DP L+
Sbjct: 835 HTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLKITDPFLERI-TEN 893
Query: 728 VSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 VSFIFQNITTQA 905
>gi|355779828|gb|EHH64304.1| DNA repair and recombination protein RAD54B [Macaca fascicularis]
Length = 908
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/672 (41%), Positives = 388/672 (57%), Gaps = 51/672 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTP+QNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTAALISLSCEKRIILTGTPVQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGCLSSYRKIYEEPIILSREPSASEEEKELGERRATELACLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E V+ + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQ----TGADGFE--NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-K 510
L+ + I+ + D E + L + + A Y + S KL VL +LAVI +
Sbjct: 596 CLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHE 655
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIF 569
+ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FIF
Sbjct: 656 LRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFIF 715
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEE
Sbjct: 716 LLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEE 775
Query: 630 KMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
K+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C +
Sbjct: 776 KIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGEV 834
Query: 689 ---------------QVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWGAG 727
Q+ P +S+ LS W H + + DP L+
Sbjct: 835 HTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLKITDPFLERI-TEN 893
Query: 728 VSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 VSFIFQNITTQA 905
>gi|403295789|ref|XP_003938808.1| PREDICTED: DNA repair and recombination protein RAD54B [Saimiri
boliviensis boliviensis]
Length = 910
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 278/673 (41%), Positives = 387/673 (57%), Gaps = 52/673 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP + LRPHQ+EG+ F+YE
Sbjct: 253 KPRHDPYMPNSLVMPRPDK--NHQRVFNKNGLPLVDVVIDPYVVYHLRPHQKEGIIFLYE 310
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 311 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 370
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D ++K+ F+++ +LVISYE
Sbjct: 371 WKKEFQKWLGSERIKIFTVDQ------EHKVEDFIKSV----FYSVLVISYEMLLRSLDQ 420
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + +++CDEGHRLKN +T AL+ L +R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 421 IKDIKFDILICDEGHRLKNSAIKTTTALISLSCDKRIILTGTPIQNDLQEFFALIDFVNP 480
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 481 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 540
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 541 PPKIENVVFCRPVALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 596
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 597 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 656
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +++VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 657 ELRPTERVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSVFI 716
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 717 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIE 776
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCV-- 685
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 777 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSLEELKNLFTLHESSPCVTHDLLDC-ECTGE 835
Query: 686 --NGIQVKPPPLESDCTDD----------------LSCWHHVT-EKRWLVDPILKHCWGA 726
G ++ + DC D L W H + + L DP L+
Sbjct: 836 VHTGDSLEKFIVSRDCQLDPHHQKSNSPKLLSMSQLKQWKHFSGDHSNLTDPFLERI-TE 894
Query: 727 GVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 895 NVSFIFQNITTQA 907
>gi|351713467|gb|EHB16386.1| DNA repair and recombination protein RAD54B, partial
[Heterocephalus glaber]
Length = 903
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 267/616 (43%), Positives = 375/616 (60%), Gaps = 46/616 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP + + LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWMFNKNCFPLVDVVIDPHVVHHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ YG I+ADEM LGKTLQCI+L+WTL QGP KP+I K++IV P SLV N
Sbjct: 310 CVMGMRMNGRYGAILADEMCLGKTLQCISLIWTLQCQGPYGGKPVIRKSLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WRKEFKKWLGTERIKIFTVDQ------DHKVEEFIKSV----FYSVLIISYEMLLRSLEQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GVLGSLASYRKIYEEPIVMSREPSASEEEKELGERRAAELTRVTGLFILRRTQEVINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHP 457
P K E V+ + LQ ELY L+ S A+R ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVLFCRPATLQIELYKKLLNSQAIRFCLQGSLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKIQ-----TGADGFENAMNILPTGY--AASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I+ + DG E + Y Y + + +KL VL +LAVI
Sbjct: 596 CLLFNSIKGKDCSSTCDGNEEK-----SLYEEKTDYNPLVFMEKDYSKLQVLAKLLAVIH 650
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVS+YTQTL++ + + K GY Y RLDG I +R ++V+ FN K S++FI
Sbjct: 651 ELRPTEKVVLVSHYTQTLNILQDVCKRYGYAYARLDGQTPISQRQQIVDNFNSKYSSDFI 710
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK +YR L+TG+IE
Sbjct: 711 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHAVHIYRLLTTGTIE 770
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
EK+ QRQ K+ALS VVD + ++ H FS+ EL++LF L E++ THD + C C
Sbjct: 771 EKIYQRQISKQALSGAVVDLTK-ISEHIQFSVEELKNLFTLHESSHCVTHDLLDC-ECTG 828
Query: 687 GIQVKPPPLESDCTDD 702
E D TDD
Sbjct: 829 ---------EKDRTDD 835
>gi|406867495|gb|EKD20533.1| DNA repair and recombination protein RAD26 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 945
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 269/629 (42%), Positives = 371/629 (58%), Gaps = 41/629 (6%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ 134
FK P+L ST + ++GA HDPTAP+ALV+ P K K
Sbjct: 230 FKNPLL-------STTTITQSKDGAPTPRHDPTAPDALVMQRPKDCP--------KGKQI 274
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L LR HQREGVKFMYECV G+R D G ++ADEMGLGKTLQ I L+WTL
Sbjct: 275 VDVVLDPFLGRHLREHQREGVKFMYECVMGIRDYDGRGALLADEMGLGKTLQTICLLWTL 334
Query: 195 LRQGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSF 252
L+Q P+ + P++ KA+IV P +L+ NW E KWLG + ++GG + K+ F
Sbjct: 335 LKQNPIHGSDPVVKKALIVCPVTLIDNWKKEFNKWLGNERIGVFVEGGQNKK--RKITDF 392
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKA 311
T+G+ +++I YE RS L K + +V+ DEGHRLK ++++ A+ L
Sbjct: 393 --THGKS--YSVMIIGYERLRSVHDDLKKGAGIDIVIADEGHRLKTAQNKSALAIRNLNT 448
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
RRV+LSGTP+QNDL E+F++V F+N G+LG F+K++E PIL+ + AS + K
Sbjct: 449 DRRVILSGTPMQNDLSEFFTMVDFINPGLLGKYNTFKKEFEGPILKSRQPEASAKDIEKG 508
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
R E+L + ++RRT+ +LSKYL KTE VV K T Q E+Y ++I S + +
Sbjct: 509 AARGEELTMLTKTFILRRTAEILSKYLKSKTEYVVFCKPTQAQAEIYQHIIASPFFGKAL 568
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA-MNILPTGYAASYKSGK 490
E +L IT LKK+CN P L+M K ++ A ++++P KS
Sbjct: 569 GTSE------ASLQLITILKKVCNAPSLLMQKADAPSNPLVAALLDVIPRELMQ--KSNA 620
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
+ SAK VLD +L I TT +K+V+VSNYT TLDL + ++RLDG
Sbjct: 621 I---ASAKFRVLDQLLKCISTTTTEKVVIVSNYTSTLDLVGQHLTSMSLPFLRLDGKTAQ 677
Query: 551 KKRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
K R +V+TFNKT S F F+LS+K+GG GLNL+GA+RL++FD DWNPA D QAMAR+
Sbjct: 678 KSRQGLVDTFNKTDASKTFAFLLSAKSGGSGLNLVGASRLILFDVDWNPATDQQAMARIH 737
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
RDGQK+P +YRF+ G ++EK+ QRQ K L+ VVD ++ F+ ELR LF+L+
Sbjct: 738 RDGQKRPVKIYRFVLAGGMDEKIYQRQVTKTGLADSVVDGKKSEG-SFTAQELRDLFRLD 796
Query: 669 ENTISDTHDKIKCSRCVNGIQVKPPPLES 697
N TH+ + C G V PLES
Sbjct: 797 MNAGCQTHELLGCD--CKGAGVDLAPLES 823
>gi|294949971|ref|XP_002786396.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983]
gi|239900688|gb|EER18192.1| DNA repair protein Rad54, putative [Perkinsus marinus ATCC 50983]
Length = 756
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 263/626 (42%), Positives = 379/626 (60%), Gaps = 73/626 (11%)
Query: 136 HVVVDPVLSNILRPHQREGVKFMYECVTGVRIED--AYGCIMADEMGLGKTLQCITLMWT 193
V VDP LS +LR HQR+GV+F++ C+ G+ I+D GCI+AD+MGLGKTLQ +T++WT
Sbjct: 128 EVSVDPRLSAVLREHQRQGVQFVFNCLMGL-IDDFEGEGCILADDMGLGKTLQSVTIVWT 186
Query: 194 LLRQGPLAK---PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
LL +AK P I++A++V P++LVKNW E KWLG V + + ++
Sbjct: 187 LL-TANIAKNRGPAIERALVVCPAALVKNWEAEFAKWLGESVKVCAVAESQRDKVIGAFT 245
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
F R +L+ SYETFR+H +L +GL++CDE HRLKN ++T + GL+
Sbjct: 246 GFRYNRDMR----VLIASYETFRNHCQLLADCPIGLLVCDEAHRLKNDRTKTAVCINGLR 301
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE-----FRKQYETPILRGQDSCASD 365
++R+LLSGTPIQNDL E+F+++ N + A+E FR+++ TPI +G++ AS
Sbjct: 302 TRKRLLLSGTPIQNDLDEFFAMITLANPCL---AEEKGRNSFRRRFATPISKGREPEASP 358
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E+ A+ERL +L + N+ ++RRT+ALL+K LP K V ++++D+Q LY I SD
Sbjct: 359 EEKALADERLAELSDMSNKFILRRTNALLAKVLPPKQIVVAFVRLSDIQIRLYKAFISSD 418
Query: 426 AVRRTM-KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP----- 479
V+ T+ + K+G LS I SL KLCNHP L+ + GFE A ++
Sbjct: 419 CVQTTVARSASRGKVGKNVLSLIQSLTKLCNHPSLIRRFDKRCDKGFEAADSVFAELDGI 478
Query: 480 ---TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD----DKIVLVSNYTQTLDLFER 532
A + + +++I SAK +++ +L ++ T D D++V++SNYTQT+DL +R
Sbjct: 479 TRAAKQAGNKRGDQVIISASAKFLLVYNLLRTLR-TRDGRSCDRVVIISNYTQTIDLLQR 537
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
+ + + + +RLDGS+ +KKR +V TFN ++ F+F+LSSKAGGCGLNLIG NRLVMF
Sbjct: 538 MCQEQQWPVIRLDGSIGVKKRHSLVSTFNDPKADAFVFLLSSKAGGCGLNLIGGNRLVMF 597
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD---- 647
DPDWNPAND QAMAR+WRDGQ K C++YR LSTG+IEEK+ QRQ K +LS VV
Sbjct: 598 DPDWNPANDRQAMARIWRDGQTKVCWIYRLLSTGTIEEKIYQRQMKKDSLSELVVQEEPH 657
Query: 648 -------------------------CEEDVA--RHFSMSELRSLFQLEENTISDTHDKIK 680
E+ VA FS + LR+LF L+E+T S+T D +
Sbjct: 658 ESRSRRSSSSSSSSSSSSPGLVSGTTEKKVAGSSMFSAAHLRNLFMLQEDTDSETVDALH 717
Query: 681 CSRCVNGIQVKPPPLESDCTDDLSCW 706
C RC P + DDL+ W
Sbjct: 718 C-RC-------PSNKANHNEDDLTTW 735
>gi|321476094|gb|EFX87055.1| RAD54B meiotic recombination protein [Daphnia pulex]
Length = 1001
Score = 464 bits (1193), Expect = e-127, Method: Compositional matrix adjust.
Identities = 259/601 (43%), Positives = 356/601 (59%), Gaps = 30/601 (4%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K ++P P+ALV+ PP + + + + V VVVDP LS LRPHQREGV FMYE
Sbjct: 387 KPRYNPNHPSALVMPRPP--TDIQWKESQRGTVIVDVVVDPTLSKNLRPHQREGVVFMYE 444
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKN 219
C+ G + + YG I+ADEMGLGKTLQCITL+W LL+QGP +P+I + +IV PSSLVKN
Sbjct: 445 CLMGFKTPNMYGAILADEMGLGKTLQCITLIWILLQQGPYNGRPIIQRVLIVTPSSLVKN 504
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E +WLG R+ A+ N+ F+ + V+P++V+SYE
Sbjct: 505 WEKEFRRWLGRERITVF------TADQQNRPIEFL----KHLVSPVMVVSYEMLVRCFDE 554
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + +V+CDEGHRLKN ++T L L R+VLL+GTP+QNDL E+FSL FVN
Sbjct: 555 IQQINFDMVVCDEGHRLKNAGNKTSSLLSQLDTNRKVLLTGTPVQNDLKEFFSLADFVNP 614
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ FR+ YE PI+ Q + +R +L + ++ ++RRT +++ +L
Sbjct: 615 GILGSLSSFRRTYEEPIVALQQPECDEDQRELGESCASELSHLTSQFVLRRTQEVMNAHL 674
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E V+ K T +Q LY N++ S AVR + +T+ G LS I +L+KLCNHP
Sbjct: 675 PPKVESVIFCKPTCVQVNLYRNVLDSSAVRSIL---SSTQTGNDQLSFILALRKLCNHPT 731
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE---LSAKLMVLDTMLAVIKMTTDD 515
L + A+ E + +YK I+ S K +V +L + T +
Sbjct: 732 LFA-ATRKHAECSE--------LWQENYKEDSSQIQSRDASGKFVVTFAILDSLMKNTKE 782
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSK 574
KI+LVS T+ LDLF R Y +VRLDGS R +V+ FN + +F+LSSK
Sbjct: 783 KIILVSYSTKMLDLFGESCTERKYSFVRLDGSTPTNTRMGIVDRFNDPQGADRVFLLSSK 842
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNLIGA+RL+++D DWNPAND QAMAR+WR+GQK+ +YR L+TG+IEEK+ QR
Sbjct: 843 AGGVGLNLIGASRLILYDIDWNPANDMQAMARIWREGQKRTVQIYRLLTTGTIEEKIFQR 902
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
Q K+ LS +VD + HF+ EL+ LF L E+T DTHD I C G+ PP
Sbjct: 903 QILKQGLSGAIVDARDSTQGHFTREELKDLFTLREDTDCDTHDLISCQCTQKGVSPIPPE 962
Query: 695 L 695
L
Sbjct: 963 L 963
>gi|67475316|ref|XP_653352.1| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
gi|56470295|gb|EAL47966.1| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 884
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 286/698 (40%), Positives = 400/698 (57%), Gaps = 58/698 (8%)
Query: 47 DEPNSKLPMTKEEMSEHENLIRQIL---AKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
+E K+ KEE + + R +L AK F VP N V + + L
Sbjct: 191 EEECEKIVQKKEEKKKTVFVGRVLLSKKAKGFVVPYKN-----------AVIQRKRHEPL 239
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
+P P+A+VLY P S + +V VVVDP+L LRPHQ+ GVKFMY+CV
Sbjct: 240 FNPNEPDAVVLYQPTVTS----------RKEVAVVVDPLLGLKLRPHQKAGVKFMYDCVM 289
Query: 164 GVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G++ GCI+AD MGLGKT+Q +TL+WTLLRQGP +P K ++VAPSSLV NW N
Sbjct: 290 GLKQGFKGNGCILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWEN 349
Query: 223 EITKWLGG---RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWLG RV + G A+ D ++ Y I+VISY+ R H +
Sbjct: 350 EFKKWLGDAAPRVVGVSCSG---AKTDQAISDMDFGYAE-----IMVISYDQLRIHIDKI 401
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
K GL++CDEGHRLKN + ++ QA+ + KRRV+LSGTPIQN+L E++++V FVN
Sbjct: 402 EKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNP 461
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
+LG+ F++ YE PI++ + + E+ N+R ++L + ++RRTS + KYL
Sbjct: 462 DVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYL 521
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + VV +T LQK++YT L ++ KG + K +T+LKK+ NHP
Sbjct: 522 PPKVQHVVFCSLTPLQKKIYTALCN---LKNKPKGKDEKK--SCQFQILTALKKVSNHPW 576
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ D ++T + + ILP G A +ELS K L +LA ++ +KIV
Sbjct: 577 LIQDFVKTFPEVLDG---ILPKGDAL------WDMELSGKTAFLAKLLAFLR-KHKEKIV 626
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGG 577
+VSNYT+TL+ K GY Y++LDGS+ KR ++V FN +EFIF+LSSKAGG
Sbjct: 627 IVSNYTETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGG 686
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
CGLNL+G LVMFDPDWNPAND+QAM RVWRDGQKK C +YR LS G++EEKM QRQ
Sbjct: 687 CGLNLVGGANLVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIK 746
Query: 638 KKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
K L+ VV+ +D F +L+ L ++T +THD + C+ C G + +
Sbjct: 747 KLELAGKVVEGGDDNDESTFDDKQLKELCAY-KDTACETHDLLGCT-CGAGSRQSINWAK 804
Query: 697 SDCTDDL--SCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
SD ++ W H K+ L D +L+ +SF+F
Sbjct: 805 SDGKLEVLRKEWKHFNGKKPLEDDVLRELDSKTISFLF 842
>gi|405964762|gb|EKC30211.1| UPF0505 protein C16orf62-like protein [Crassostrea gigas]
Length = 1826
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 267/594 (44%), Positives = 359/594 (60%), Gaps = 39/594 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP++PNALV+ P +AH K+ V VVVDP LS LRPHQREGV F+YECV
Sbjct: 201 HDPSSPNALVMPQPS--AAHQWQYNKKNLPVVDVVVDPYLSVHLRPHQREGVTFLYECVM 258
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVK---N 219
G R G I+AD+MGLGKTLQCI+L+WTL +QGP KP+I +A+I+ P SLVK N
Sbjct: 259 GFRNLSGRGAILADDMGLGKTLQCISLIWTLYKQGPYGGKPVIKRALIITPGSLVKASTN 318
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W EI KWLG R+ A + DN++ F+ T + PI++ISYE F
Sbjct: 319 WFLEIKKWLGTERLKAFAVSS------DNRIEEFVNT----SIYPIVIISYEMFVRVYEQ 368
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
L + +++CDEGHRLKN +T + + RRV+L+GTPIQNDL E+FS+V F N
Sbjct: 369 LQSLQFDIIICDEGHRLKNNNIKTTSLIASMPTPRRVVLTGTPIQNDLQEFFSIVEFCNP 428
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LG++ F++ +E PI+ + AS + ER +L I ++RR+ + KYL
Sbjct: 429 GLLGSSGSFKRVFENPIVASRQPSASPEDIELGAERGSELSRITKLFVLRRSQEINIKYL 488
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E V+ K + LQ LY+ +++ R ++ G T L I +LKKLCNHP
Sbjct: 489 PPKCEVVLFCKPSALQLSLYSQMLQGKLFRSCLRSD-----GATHLVCIGALKKLCNHPS 543
Query: 459 LVM----------DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
L+ D I+ G+ + ++ P Y S E + KL VL +L
Sbjct: 544 LIFTKASQAEECPDDIEEGS-VYSGLSSLFPPDYQEKIYSA----EHAGKLKVLSEILIQ 598
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEF 567
I ++ KIV+VSN+T+TLD+ ++ GY Y+RLDG + R ++V FN K E
Sbjct: 599 IHKDSE-KIVIVSNHTKTLDILQQFCSNCGYGYLRLDGQTSTNIRQEIVTKFNSKHCLEK 657
Query: 568 IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
+F+LSSKAGG GLNLIGA+RL+++D DWNPAND QAMARVWRDGQK+ ++YR L+TG+I
Sbjct: 658 VFLLSSKAGGVGLNLIGASRLLLYDIDWNPANDLQAMARVWRDGQKRKIYIYRLLTTGTI 717
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
EEK+ QRQ K+ LS V+D + FS ELR LF L ENTI DTHD IKC
Sbjct: 718 EEKIYQRQISKQGLSGAVMDLKNKREAQFSREELRDLFSLNENTICDTHDLIKC 771
>gi|407041035|gb|EKE40490.1| DNA repair protein, putative [Entamoeba nuttalli P19]
Length = 883
Score = 463 bits (1191), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/698 (40%), Positives = 400/698 (57%), Gaps = 58/698 (8%)
Query: 47 DEPNSKLPMTKEEMSEHENLIRQIL---AKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
+E K+ KEE + + R +L AK F VP N V + + L
Sbjct: 191 EEECEKIVQKKEEKKKTVFVGRVLLSKKAKGFVVPYKN-----------AVIQRKRHEPL 239
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
+P P+A+VLY P S + +V VVVDP+L LRPHQ+ GVKFMY+CV
Sbjct: 240 FNPNEPDAVVLYQPTVTS----------RKEVAVVVDPLLGLKLRPHQKAGVKFMYDCVM 289
Query: 164 GVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G++ GCI+AD MGLGKT+Q +TL+WTLLRQGP +P K ++VAPSSLV NW N
Sbjct: 290 GLKQGFKGNGCILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWEN 349
Query: 223 EITKWLGG---RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWLG RV + G A+ D ++ Y I+VISY+ R H +
Sbjct: 350 EFKKWLGNAAPRVVGVSCSG---AKTDQAISDMDFGYAE-----IMVISYDQLRIHIDKI 401
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
K GL++CDEGHRLKN + ++ QA+ + KRRV+LSGTPIQN+L E++++V FVN
Sbjct: 402 EKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNP 461
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
+LG+ F++ YE PI++ + + E+ N+R ++L + ++RRTS + KYL
Sbjct: 462 DVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYL 521
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + VV +T LQK++YT L ++ KG + K +T+LKK+ NHP
Sbjct: 522 PPKVQHVVFCSLTPLQKKIYTALC---TLKNKPKGKDEKK--SCQFQILTALKKVSNHPW 576
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ D ++T + + +LP G A +ELS K L +LA ++ +KIV
Sbjct: 577 LIQDFVKTFPEVLDG---VLPKGEAL------WDMELSGKTAFLAKLLAFLR-KHKEKIV 626
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGG 577
+VSNYT+TL+ K GY Y++LDGS+ KR ++V FN +EFIF+LSSKAGG
Sbjct: 627 IVSNYTETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGG 686
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
CGLNL+G LVMFDPDWNPAND+QAM RVWRDGQKK C +YR LS G++EEKM QRQ
Sbjct: 687 CGLNLVGGANLVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIK 746
Query: 638 KKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
K L+ VV+ +D F +L+ L ++T +THD + C+ C G + +
Sbjct: 747 KLELAGKVVEGGDDNDESTFDDKQLKELCAY-KDTACETHDLLGCT-CGAGSRQSINWAK 804
Query: 697 SDCTDDL--SCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
SD ++ W H K+ L D +L+ +SF+F
Sbjct: 805 SDGKLEVLRKEWKHFNGKKPLEDDVLRELDSKTISFLF 842
>gi|449702030|gb|EMD42742.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
histolytica KU27]
Length = 884
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/698 (40%), Positives = 400/698 (57%), Gaps = 58/698 (8%)
Query: 47 DEPNSKLPMTKEEMSEHENLIRQIL---AKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
+E K+ KEE + + R +L AK F VP N V + + L
Sbjct: 191 EEECEKIVQKKEEKKKTVFVGRVLLSKKAKGFVVPYKN-----------AVIQRKRHEPL 239
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
+P P+A+VLY P S + +V VVVDP+L LRPHQ+ GVKFMY+CV
Sbjct: 240 FNPNEPDAVVLYQPTVTS----------RKEVAVVVDPLLGLKLRPHQKAGVKFMYDCVM 289
Query: 164 GVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G++ GCI+AD MGLGKT+Q +TL+WTLLRQGP +P K ++VAPSSLV NW N
Sbjct: 290 GLKQGFKGNGCILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWEN 349
Query: 223 EITKWLGG---RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWLG RV + G A+ D ++ Y I+VISY+ R H +
Sbjct: 350 EFKKWLGDAAPRVVGVSCSG---AKTDQAISDMDFGYAE-----IMVISYDQLRIHIDKI 401
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
K GL++CDEGHRLKN + ++ QA+ + KRRV+LSGTPIQN+L E++++V FVN
Sbjct: 402 EKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNP 461
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
+LG+ F++ YE PI++ + + E+ N+R ++L + ++RRT+ + KYL
Sbjct: 462 DVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTAKVNQKYL 521
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + VV +T LQK++YT L ++ KG + K +T+LKK+ NHP
Sbjct: 522 PPKVQHVVFCSLTPLQKKIYTALCN---LKNKPKGKDEKK--SCQFQILTALKKVSNHPW 576
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ D ++T + + ILP G A +ELS K L +LA ++ +KIV
Sbjct: 577 LIQDFVKTFPEVLDG---ILPKGDAL------WDMELSGKTAFLAKLLAFLR-KHKEKIV 626
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGG 577
+VSNYT+TL+ K GY Y++LDGS+ KR ++V FN +EFIF+LSSKAGG
Sbjct: 627 IVSNYTETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGG 686
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
CGLNL+G LVMFDPDWNPAND+QAM RVWRDGQKK C +YR LS G++EEKM QRQ
Sbjct: 687 CGLNLVGGANLVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIK 746
Query: 638 KKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
K L+ VV+ +D F +L+ L ++T +THD + C+ C G + +
Sbjct: 747 KLELAGKVVEGGDDNDESTFDDKQLKELCAY-KDTACETHDLLGCT-CGAGSRQSINWAK 804
Query: 697 SDCTDDL--SCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
SD ++ W H K+ L D +L+ +SF+F
Sbjct: 805 SDGKLEVLRKEWKHFNGKKPLEDDVLRELDSKTISFLF 842
>gi|146087788|ref|XP_001465905.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
gi|134070006|emb|CAM68336.1| putative DNA repair and recombination protein RAD54 [Leishmania
infantum JPCM5]
Length = 1126
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/612 (42%), Positives = 363/612 (59%), Gaps = 58/612 (9%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP A+VL+ D + + QV VVVDP++ + LRPHQ GVKF+++C+
Sbjct: 397 LHDPDREKAVVLFRA------DYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCI 450
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
TG R+ +G I+ADEMGLGKT+Q + ++T L+QG +P K ++V PSSLVKNWCN
Sbjct: 451 TGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCN 510
Query: 223 EITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
E KWLG G V I S + D ++ F +LVISY+ R + L
Sbjct: 511 EFDKWLGEGAVRHFAIS-ESTPKGDRIISRFDGD------GDVLVISYDQLRKYIDRLSG 563
Query: 282 -NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V+FVN GI
Sbjct: 564 LRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGI 623
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG F + +E P+ G+D D ++ +R L + R ++RRT ++ YLP
Sbjct: 624 LGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRAHYLSVLTQRFILRRTQSINESYLPP 683
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K + V +++ + Q+ Y L +D V T L I++L+KLCNH DL
Sbjct: 684 KVDVTVFVRLGEKQELAYQKL--ADVVESAE---------CTPLVLISALRKLCNHMDLF 732
Query: 461 MDKI------------------------QTGADGFENA--MNILPTGYAASYKSGKLLIE 494
D + ++ A G +++LP G +K G L ++
Sbjct: 733 HDAVHLSHQIGNSAGALAQQQQAGRRRGRSSAAGESRGIPLSVLPKG----FKPGSLSVD 788
Query: 495 LSAKLMVLDTMLAVIKMTTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+K+ + +L +K + DK+V+VSN+TQTLD+ L + Y +LDGS IKKR
Sbjct: 789 CGSKMHFVSLVLDELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKR 848
Query: 554 AKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
++V+ FN S E +F+LSSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQ
Sbjct: 849 QQLVDYFNVPGSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQ 908
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KK F+YR LSTG+IEEK+ QRQ K+ LS+ VVD +ED +HF++ EL+SLF+ + +T+
Sbjct: 909 KKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKSLFKYKADTL 968
Query: 673 SDTHDKIKCSRC 684
DTHD + C+ C
Sbjct: 969 CDTHDLLGCTSC 980
>gi|167378232|ref|XP_001734726.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165903652|gb|EDR29108.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 884
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 285/698 (40%), Positives = 401/698 (57%), Gaps = 58/698 (8%)
Query: 47 DEPNSKLPMTKEEMSEHENLIRQIL---AKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
+E K+ KEE + + R +L AK F VP N V + + L
Sbjct: 191 EEECEKIVQKKEEKKKMVCIGRVLLSRKAKDFIVPYKN-----------AVIQRKRNEPL 239
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
+P P+A+VLY P S + +V VVVDP+L LRPHQ+ GVKFMY+CV
Sbjct: 240 FNPNDPDAVVLYQPTVTS----------RKEVAVVVDPLLGLKLRPHQKAGVKFMYDCVM 289
Query: 164 GVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G++ GCI+AD MGLGKT+Q +TL+WTLLRQGP +P K ++VAPSSLV NW N
Sbjct: 290 GLKQGFRGNGCILADGMGLGKTIQAVTLIWTLLRQGPNGEPTCKKVMVVAPSSLVGNWEN 349
Query: 223 EITKWLGG---RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWLG RV + G A+ D ++ Y I+VISY+ R H +
Sbjct: 350 EFKKWLGDAAPRVVGVSCSG---AKTDQAISDMDFGYAE-----IMVISYDQLRIHIDKI 401
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
K GL++CDEGHRLKN + ++ QA+ + KRRV+LSGTPIQN+L E++++V FVN
Sbjct: 402 EKIKGWGLLICDEGHRLKNADIKSSQAVNRVPTKRRVILSGTPIQNELGEFYAMVSFVNP 461
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
+LG+ F++ YE PI++ + + E+ N+R ++L + ++RRTS + KYL
Sbjct: 462 DVLGSLSAFKRIYEEPIMKSRQFDCTPEEKYAGNQRSKELTRLTKLFILRRTSKVNQKYL 521
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + VV +T LQK++YT L ++ KG + K +T+LKK+ NHP
Sbjct: 522 PPKVQHVVFCSLTPLQKKIYTALC---TLKNKPKGKDEKK--SCQFQILTALKKVSNHPW 576
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ D ++T + + ILP G A +ELS K L +LA ++ +KIV
Sbjct: 577 LIQDFVKTFPEVLDG---ILPKGEAL------WDMELSGKTAFLAKLLAFLR-KHKEKIV 626
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGG 577
+VSNYT+TL+ K GY Y++LDGS+ KR ++V FN +EFIF+LSSKAGG
Sbjct: 627 IVSNYTETLNFIAHHCKKCGYPYIQLDGSVAATKRTQMVNRFNNPELDEFIFLLSSKAGG 686
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
CGLNL+G LVMFDPDWNPAND+QAM RVWRDGQKK C +YR LS G++EEKM QRQ
Sbjct: 687 CGLNLVGGANLVMFDPDWNPANDEQAMGRVWRDGQKKKCHIYRTLSAGTVEEKMYQRQIK 746
Query: 638 KKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
K L+ VV+ +D F +L+ L + ++T +THD + C+ C G + +
Sbjct: 747 KLELAGKVVEGGDDNDESTFDDKQLKELC-IYKDTACETHDLLGCT-CGAGSRQSINWAK 804
Query: 697 SDCTDDL--SCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
+D ++ W H K+ L D +L+ +SF+F
Sbjct: 805 NDGKLEVLRKEWKHFNGKKPLEDDVLRELDSKTISFLF 842
>gi|398015957|ref|XP_003861167.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
gi|322499392|emb|CBZ34465.1| DNA repair and recombination protein RAD54, putative [Leishmania
donovani]
Length = 1126
Score = 461 bits (1187), Expect = e-127, Method: Compositional matrix adjust.
Identities = 258/612 (42%), Positives = 363/612 (59%), Gaps = 58/612 (9%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP A+VL+ D + + QV VVVDP++ + LRPHQ GVKF+++C+
Sbjct: 397 LHDPDREKAVVLFRA------DYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCI 450
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
TG R+ +G I+ADEMGLGKT+Q + ++T L+QG +P K ++V PSSLVKNWCN
Sbjct: 451 TGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCN 510
Query: 223 EITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
E KWLG G V I S + D ++ F +LVISY+ R + L
Sbjct: 511 EFDKWLGEGAVRHFAIS-ESTPKGDRIISRFDGD------GDVLVISYDQLRKYIDRLSG 563
Query: 282 -NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V+FVN GI
Sbjct: 564 LRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGI 623
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG F + +E P+ G+D D ++ +R L + R ++RRT ++ YLP
Sbjct: 624 LGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRAHYLSVLTQRFILRRTQSINESYLPP 683
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K + V +++ + Q+ Y L +D V T L I++L+KLCNH DL
Sbjct: 684 KVDVTVFVRLGEKQELAYQKL--ADVVESAE---------CTPLVLISALRKLCNHMDLF 732
Query: 461 MDKI------------------------QTGADGFENA--MNILPTGYAASYKSGKLLIE 494
D + ++ A G +++LP G +K G L ++
Sbjct: 733 HDAVHLSHQIGNSAGALAQQQQAGRRRGRSSAAGESRGIPLSVLPKG----FKPGSLSVD 788
Query: 495 LSAKLMVLDTMLAVIKMTTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+K+ + +L +K + DK+V+VSN+TQTLD+ L + Y +LDGS IKKR
Sbjct: 789 CGSKMHFVSLVLDELKRNGERDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKKR 848
Query: 554 AKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
++V+ FN S E +F+LSSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDGQ
Sbjct: 849 QQLVDYFNVPGSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDGQ 908
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KK F+YR LSTG+IEEK+ QRQ K+ LS+ VVD +ED +HF++ EL+SLF+ + +T+
Sbjct: 909 KKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKSLFKYKADTL 968
Query: 673 SDTHDKIKCSRC 684
DTHD + C+ C
Sbjct: 969 CDTHDLLGCTSC 980
>gi|452985646|gb|EME85402.1| hypothetical protein MYCFIDRAFT_213848 [Pseudocercospora fijiensis
CIRAD86]
Length = 966
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 264/596 (44%), Positives = 354/596 (59%), Gaps = 47/596 (7%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP NALV+ L + K + V VVVDP+L+ LR HQREGV F+YECV
Sbjct: 251 HDPKGENALVM--------KRLASVPKGRQIVDVVVDPLLTKHLREHQREGVAFLYECVM 302
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G++ D G I+ADEMGLGKTLQ I L+WTLL+Q P+ + P+I KA+IV P SL+KNW
Sbjct: 303 GMKDYDGEGAILADEMGLGKTLQTIALLWTLLKQNPVFEDAPVIKKALIVCPVSLIKNWR 362
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
NE KWLG R+ D DNK+ T GR +++I YE L
Sbjct: 363 NEFRKWLGSERIGVFVAD-------DNKMRLTDFTKGR--AYHVMIIGYEKLTKVKDQLQ 413
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ +V+CDEGHRLK ++ A+ L RR++LSGTPIQNDL E++++V FVN
Sbjct: 414 GGTGIDIVICDEGHRLKTASNKAAGAIKSLNTDRRIILSGTPIQNDLSEFYTMVDFVNPN 473
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
I+ F+K++ETPIL+ + AS ++ K R QL + + ++RRT+ +L+KYLP
Sbjct: 474 IMSKYTTFKKEFETPILKSRQPGASQSDLEKGEARSAQLADLTGKFILRRTAEILNKYLP 533
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE VV + T+ QK +Y ++ S A M NTK L I LKK+CN P+L
Sbjct: 534 PKTEYVVFCRPTEAQKTVYRMIVSSQAFMAAM----NTK--AVVLELIMILKKVCNSPNL 587
Query: 460 VMDKI-----QTG-ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
++ K QT +D FE+ L G A S S KL V D++L I T
Sbjct: 588 LIQKTGDKDEQTKRSDLFEDVPKHL-LGSAGS----------SGKLQVFDSLLHQIHTHT 636
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFML 571
D+K+V+VSNYT T+D+ RL ++RLDGS KR ++V+ FN+ F+ +L
Sbjct: 637 DEKVVVVSNYTSTMDVLGRLLTSMDMSFLRLDGSTPTNKRQEIVDHFNRWPRKKAFVLLL 696
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+KAGG GLNLIGA+RLVMFD DWNPA D QAMARV RDGQK+PCF+YR L+ G+++EK+
Sbjct: 697 SAKAGGVGLNLIGASRLVMFDMDWNPATDLQAMARVHRDGQKRPCFIYRLLTQGALDEKI 756
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
QRQ K L+ +VD + A F+ +ELR LF L+E TH + CS NG
Sbjct: 757 FQRQVSKVGLADSIVDGKA-AASGFTQAELRDLFTLDEGEDCQTHKLLGCSCGGNG 811
>gi|154338237|ref|XP_001565343.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134062392|emb|CAM42253.1| putative DNA repair and recombination protein RAD54 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 1126
Score = 459 bits (1182), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/614 (41%), Positives = 363/614 (59%), Gaps = 58/614 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
+ LHDP A+VL+ D + + QV VVVDP++ + LRPHQ GVKF+++
Sbjct: 396 RPLHDPDREKAVVLFRA------DYKRDLHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFD 449
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+TG R+ +G I+ADEMGLGKT+Q + ++T L+QG +P K ++V PSSLVKNW
Sbjct: 450 CITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNW 509
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
CNE KWLG G V I S + D ++ F +LVISY+ R + L
Sbjct: 510 CNEFDKWLGEGAVKHFAIS-ESTPKGDRIISRFDGD------GDVLVISYDQLRKYIDRL 562
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V+FVN
Sbjct: 563 SRLRFVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNP 622
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG F + +E P+ G+D D ++ +R L + R ++RRT ++ YL
Sbjct: 623 GILGNRDLFTRVFEEPVSLGRDPDCPDHLKSLGRDRAHYLSMLTQRFILRRTQSINESYL 682
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + V +++ Q++ Y L +D V T L I++L+KLCNH D
Sbjct: 683 PPKVDVTVFVRLGAKQEQAYQKL--ADIVESAE---------CTPLVLISALRKLCNHMD 731
Query: 459 LVMDKIQ--------TGADGFEN------------------AMNILPTGYAASYKSGKLL 492
L D + GA + ++LP G +K G L
Sbjct: 732 LFHDAVHLSHQVGNGIGASAQQQQAGRRRGRSSAADEPQGIPFSVLPKG----FKPGSLS 787
Query: 493 IELSAKLMVLDTMLAVIKMTTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
++ +K+ + +L ++ + DK+V+VSN+TQTLD+ L + Y +LDGS IK
Sbjct: 788 MDYGSKMHFVSLVLDELRENGEHDKLVIVSNFTQTLDIIAALCNSKRIAYFQLDGSTPIK 847
Query: 552 KRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR ++V+ FN S E +F+LSSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRD
Sbjct: 848 KRQQLVDYFNVPDSQEVVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRD 907
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQKK F+YR LSTG+IEEK+ QRQ K+ LS+ VVD +ED +HF++ EL+SLF+ + +
Sbjct: 908 GQKKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKSLFKYKVD 967
Query: 671 TISDTHDKIKCSRC 684
T+ DTHD + C+ C
Sbjct: 968 TLCDTHDLLGCTSC 981
>gi|196008607|ref|XP_002114169.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
gi|190583188|gb|EDV23259.1| hypothetical protein TRIADDRAFT_27976 [Trichoplax adhaerens]
Length = 687
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/640 (39%), Positives = 368/640 (57%), Gaps = 38/640 (5%)
Query: 66 LIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDL 125
+ RQ F P+ + TK + + E R HDP AP+ALV+ P+ S
Sbjct: 65 IARQKFTNKFSSPLKSIEN--MPTKDVKITHESPR---HDPNAPDALVM---PRPSVDHQ 116
Query: 126 LKIDKDKI-QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKT 184
+ +K+ V VVVDP +S LRPHQR+GV F+YECV G+R +G I+ADEMGLGK+
Sbjct: 117 RNFNTNKLCVVDVVVDPYISRRLRPHQRDGVIFLYECVMGMRDFSGFGAILADEMGLGKS 176
Query: 185 LQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSK 242
LQCI L+WTL +QG K I + ++V P SLV+NW E KWLG R P+
Sbjct: 177 LQCIALIWTLYKQGMYGGKAPIKRILLVTPGSLVQNWSREFRKWLGIERFKVFPVSS--- 233
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
D ++ F+ + P P+++ISYE F L + L++CDEGHRLKN ++T
Sbjct: 234 ---DKRVEEFI----KYPQYPLMIISYEMFVRSCDTLKGIKFDLLICDEGHRLKNSSNKT 286
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
+ + ++ +RRVL++GTPIQNDL E++++V F N GILG+ FR+ YE PI + +
Sbjct: 287 FALISSVQTRRRVLVTGTPIQNDLQEFYAIVEFCNPGILGSEAAFRRIYEDPIAKSRLPG 346
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI 422
+ E+ R +L + +RRT ++ +LP K E V+ + LQ +Y +L+
Sbjct: 347 CNKKEKNLGESRAIELSRLTKLFCLRRTQEVIIHHLPPKVEYVIFCRTAPLQVLIYRHLL 406
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG---------ADGFEN 473
S + + E+ I +L+K+CN P+L+ + ++ E
Sbjct: 407 SSRLFKECISAVESNYC--RHFMCINALRKVCNEPNLIYEAVKDAESHLIDDEIGKSIEE 464
Query: 474 AMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVIKMTT-DDKIVLVSNYTQTLD 528
+L G Y +Y E S KL VL +L I + +K+V+VSN+T+TLD
Sbjct: 465 EHTLLYAGIQSLYPPNYSPDTFTTEHSGKLAVLSNLLDWIYQNSPKEKVVVVSNFTRTLD 524
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANR 587
+ +++ K + Y+YVRLDGS KR +VE FN + S F+F+LSSKAGG GLNLIGA+R
Sbjct: 525 VLQKMCKSKNYRYVRLDGSTPTSKRHTIVENFNSSYSKTFVFLLSSKAGGTGLNLIGASR 584
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
LV++D DWNPAND QAMAR+WRDGQK+ ++YR ++TG+IEEK+ QRQ K LS V+D
Sbjct: 585 LVLYDIDWNPANDLQAMARIWRDGQKRDVYIYRLVTTGTIEEKIFQRQVMKHDLSGAVMD 644
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
E F+ +L +LF L E+ + DTH + C+ C+ G
Sbjct: 645 TRESGRSQFTRKDLHNLFSLREDIVCDTHKLLGCNCCLEG 684
>gi|396466336|ref|XP_003837669.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
gi|312214231|emb|CBX94225.1| hypothetical protein LEMA_P123770.1 [Leptosphaeria maculans JN3]
Length = 938
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/672 (40%), Positives = 377/672 (56%), Gaps = 63/672 (9%)
Query: 18 PGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKV 77
PG K P+ K + + GS D E P+ + +++ FK
Sbjct: 196 PGYK----PLLTSKSNVKRTQSSGSADGEHVPDYAPSLQRKQH--------------FKT 237
Query: 78 PILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHV 137
P+L+ T + R + HDP A NALV+ P A K V V
Sbjct: 238 PLLSNT-------VMAQRNASIPQPRHDPNAENALVMKRPNSCPA--------GKQIVDV 282
Query: 138 VVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQ 197
VVDPVLS LR HQREGVKF+YECV G+R E G IMADEMGLGKTLQ I L+WTLL+Q
Sbjct: 283 VVDPVLSKHLRDHQREGVKFLYECVMGMRCE-GEGAIMADEMGLGKTLQTIALIWTLLKQ 341
Query: 198 GPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
P+ + P+++KA+IV P+ LV NW E KWLG L D K+ F T
Sbjct: 342 NPIHGSSPVVNKALIVCPAGLVDNWKREFRKWLGNERIGL-----FSCHKDRKVTDF--T 394
Query: 256 YGRRPVNPILVISYETFRSHASVLHK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
G+ ++++ YE R L K + +V+ DEGHRLK ++ A+ L +RR
Sbjct: 395 MGK--AYNVMIVGYEMLRVVQEDLKKAGGIDIVIADEGHRLKTANNKAMLAIQSLSTERR 452
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
V+LSGTP+QNDL E+++ + FVN G+LG F++ +E PI+R + A+++E K R
Sbjct: 453 VILSGTPLQNDLGEFYTAIDFVNPGLLGQRSAFKRTFEAPIMRSRQPDATESELEKGEAR 512
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
++L+ + ++ +IRRT+ +L+KYLP KTE +V K T Q E Y N++ S + G
Sbjct: 513 WKELVSLTSQFMIRRTANVLAKYLPPKTEHIVFCKPTRAQAEAYRNILTSPIFSAALGNG 572
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLV---MDKIQTGADGFENAMNILPTGYAASYKSGKL 491
+ AL I LKK+CN P L+ D T + + + ++P S S
Sbjct: 573 NSD----MALQLINVLKKVCNSPSLLKSSTDNDDTPSALLQTLLPLIPPQILNSSAS--- 625
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
S KL +LD+++ I TTD+KIV+VSNYT TLD+ ERL Y Y+RLDGS
Sbjct: 626 ----STKLRLLDSLVHRIHTTTDEKIVIVSNYTTTLDMIERLLTSLSYTYLRLDGSTPAA 681
Query: 552 KRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
KR +V FN +S F F+LS+K+GG G+NLIGA+R+V+F+ DWNPA D QAMAR+ R
Sbjct: 682 KRQPLVNKFNTSSKSTAFAFLLSAKSGGVGINLIGASRIVLFECDWNPATDLQAMARIHR 741
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
+GQK PC +YRFL G ++EK+ QRQ K L+ VVD + A FS ELR LF+L+E
Sbjct: 742 EGQKLPCKIYRFLIKGGLDEKIYQRQVSKMGLAGAVVDNKAS-ASSFSREELRDLFRLDE 800
Query: 670 NTISDTHDKIKC 681
THD + C
Sbjct: 801 RAGCQTHDLLGC 812
>gi|167521471|ref|XP_001745074.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776688|gb|EDQ90307.1| predicted protein [Monosiga brevicollis MX1]
Length = 827
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/620 (40%), Positives = 376/620 (60%), Gaps = 33/620 (5%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K +DP P ALVL PP + H L + V +VVDP LS ILRPHQREGV+F+ E
Sbjct: 164 KPRYDPNQPGALVL-KPPPVRVHSHLHMAAPSC-VPLVVDPHLSTILRPHQREGVRFVIE 221
Query: 161 CVTGVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKN 219
CV G + + + GCI+AD+MGLGKTLQCI+++WTLL+QG KPL +A+I+ P SLVKN
Sbjct: 222 CVAGCKSDLEGTGCILADDMGLGKTLQCISVVWTLLKQGFDGKPLCQRALIICPGSLVKN 281
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ I +K E + +F P++++SYE + +
Sbjct: 282 WEAEFRKWLGVERIKTFAISSANKLEHVQQAKAF----------PVVIVSYEMYLRCMDL 331
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
L + +V+CDE HRLKN ++T + L GL +RR+ L+GTP+QNDL E+F+LV FVN
Sbjct: 332 LKQVRFDVVICDEAHRLKNANAKTTRILSGLATRRRIALTGTPVQNDLQEFFTLVDFVNP 391
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+ G++ +F++ YETPI+R + A+ AE+ R E+L ++ ++RRT + + YL
Sbjct: 392 GLFGSSAKFKRLYETPIVRARQHDATPAEKDLGEARAEELNRTIHEFVLRRTKEVNAAYL 451
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P KT+ VV + T LQ +LY LI + VR M + G L I +L+ LCN P
Sbjct: 452 PPKTDYVVFCQPTPLQLQLYQRLIATQFVRSCMNA---VRGGTRHLLVIAALRMLCNAPS 508
Query: 459 LVMDKIQTG-ADG-----FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
L+ + AD ++ +LP + L+E S K+ ++ ML +
Sbjct: 509 LLAGRQSANVADSDFDRVLKDVRRLLPGSDDNDVAARTTLLEGSGKVALVRHMLRQWREK 568
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFML 571
TD++ +LVSN T+ LD+ + L + G+ ++RL GS +R ++V FN + ++F+F++
Sbjct: 569 TDERALLVSNSTRCLDILQLLCEAEGWPFLRLQGSTPTHQRLEMVNRFNARHHDDFVFLM 628
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGG GLN++GA+RLV+FD DWNP++D QAMAR+WR+GQ +P F+YR ++TG+IEEK+
Sbjct: 629 SSKAGGVGLNIVGASRLVLFDTDWNPSHDLQAMARIWREGQTRPVFIYRLVATGTIEEKI 688
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT-------HDKIKCSRC 684
QRQ K AL + V++ +++ + FS +L+ LFQL + S+T DKI S
Sbjct: 689 YQRQIVKSALGTTVME-DKETEQAFSTKDLKELFQLHLDVASETVQLMRKKKDKISSSLV 747
Query: 685 VNGIQVKPPPLESDCTDDLS 704
G+ P PL+ D D L+
Sbjct: 748 NWGVYQPPFPLD-DLRDSLT 766
>gi|281209956|gb|EFA84124.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1905
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 254/590 (43%), Positives = 368/590 (62%), Gaps = 38/590 (6%)
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQV-HVVVDPVLSNILRPHQREGV 155
+ A + HDP P+ALVLYTPP +D++ +V +VVVDP +S LRPHQR GV
Sbjct: 817 KNALQPRHDPNVPDALVLYTPPASG------LDENGQRVTYVVVDPFISKHLRPHQRRGV 870
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSS 215
+F+Y+CVTG R + GCI+AD+MGLGKT+ +T +WTLL+Q P +P KAIIV P+
Sbjct: 871 QFLYDCVTGQRHQFGNGCILADQMGLGKTVMTLTTLWTLLKQSPTGQPTCKKAIIVTPAG 930
Query: 216 LVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
LV NW EI +W G R+ ++ + ++ + VNP+L+ISY+ R
Sbjct: 931 LVGNWKREIKRWFGAERLKPFTLNDS----VSKNTKQMLEDFNTSTVNPVLIISYDQCRI 986
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
+S+L G+++CDEGHRLKN ESQT Q++ +K K +++LSGTPIQNDL+E++S+V
Sbjct: 987 FSSILCTMSCGVLVCDEGHRLKNMESQTTQSIASIKTKAKIILSGTPIQNDLIEFYSMVD 1046
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
F N G LGT +F+K Y PI+RG++ + + QL I + ++RR S +L
Sbjct: 1047 FCNPGSLGTLSQFKKDYANPIIRGREDSTKEGI-----AKAMQLSKITSSFILRRKSNVL 1101
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
+YLP KT VV ++++ QK+LY ++ ++ V + G +N AL+++T+LK+LC
Sbjct: 1102 EEYLPTKTIHVVFCRLSEFQKKLYRAVLDNNGVDSIIAGKQN------ALTTMTTLKQLC 1155
Query: 455 NHPDLVMDKIQTGADGFENAMNIL-PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
N+P L+ K + F ++ + PT + AS +SGK+ E +L++ L
Sbjct: 1156 NYPSLI--KSDDYSKYFTDSNDTTTPTDFDAS-QSGKM--EFVEQLLITLKSLG------ 1204
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEF--IFML 571
D+ VLVSNYTQTLD+FE L K + R+DG + +R V+ FN SN+ +F+L
Sbjct: 1205 -DRAVLVSNYTQTLDVFELLLKKLSIQSYRIDGQVKATERQDRVDKFNDPSNKTHTVFLL 1263
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGG GLNLIGAN +V++DPDWNPA D QAM RVWR+GQ KP +YR L+ G+IEEK+
Sbjct: 1264 SSKAGGVGLNLIGANHIVLYDPDWNPAIDIQAMERVWREGQTKPVSIYRLLTAGTIEEKI 1323
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
QRQ K++LS+ VVD F+ EL+ +F L + T +THD + C
Sbjct: 1324 HQRQIIKESLSNSVVDKSHYEKSTFTNEELKDIFSLNDTTQCETHDLLTC 1373
>gi|398407551|ref|XP_003855241.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
gi|339475125|gb|EGP90217.1| SNF2 family DNA-dependent ATPase domain-containing protein
[Zymoseptoria tritici IPO323]
Length = 979
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 274/673 (40%), Positives = 388/673 (57%), Gaps = 65/673 (9%)
Query: 40 LGSVDNEDEPNSKLPMTKEEMSEHE---NLIRQILAK----PFKVPILNYTGGGYSTKAL 92
L +D + +K +E+++ H+ Q L+K FK P++N +
Sbjct: 201 LKDIDGTKKVTNKAQARQEKIAAHQKDPTTKVQALSKTSNNAFKTPVINSN--------V 252
Query: 93 GVRREGARKAL--HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPH 150
+ A++A+ H NALV+ P + K + V VVVDP+L+ LR H
Sbjct: 253 QHQERNAKEAVPRHKVDGENALVMKRPKS--------VPKGRQMVDVVVDPILTRALREH 304
Query: 151 QREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP------L 204
QR GV F+YECV G++ D G I+ADEMGLGKTLQ I L+WTLL+Q P P L
Sbjct: 305 QRVGVSFLYECVMGMKDFDGEGAILADEMGLGKTLQTIALLWTLLKQDPAQNPAQPGIGL 364
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
I KA+IV P +++KNW EI KWLG ++ + A+ N++ F T G+ I
Sbjct: 365 IKKALIVCPVTVIKNWKKEIYKWLGKTGISVFV-----ADNHNRITDF--TKGK--CYNI 415
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
++I YE L + ++ +V+ DEGHRLK ++ QA+ L +R++LSGTPIQN
Sbjct: 416 MIIGYEKLVKVQKQLQEAKIDIVIADEGHRLKTAANKAAQAIKSLNTDKRIILSGTPIQN 475
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL E+F +V VN +LG F++++E PI+ + A+ A K R E+L I N
Sbjct: 476 DLSEFFMMVDLVNPSVLGKYTTFKREFEGPIVASRQPGATAAALEKGEARSEELANITNM 535
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
++RRTS +LSKYLP KTE VV K T +QK++Y +I++ M NT L
Sbjct: 536 FILRRTSEILSKYLPPKTEYVVFCKPTKVQKQIYRAVIEAPVFVAAM----NTP--TEVL 589
Query: 445 SSITSLKKLCNHPDLVMDKIQTG-----ADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
IT LKK+CN P L++ K + G AD E+ L A + SG KL
Sbjct: 590 RLITMLKKVCNAPKLLIKKDEKGNEERVADLIEHIPQSL---LKAPHASG--------KL 638
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
VLD +L I TD+K+VLVSNYT TLD+ + L GY ++RLDGS + KR +V+T
Sbjct: 639 AVLDDLLFQIDTKTDEKVVLVSNYTSTLDVLQDFIGLLGYSWLRLDGSTPVAKRQDLVDT 698
Query: 560 FNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN++ + F+F+LS+KAGG G+NLIGA+RL+++D DWNPA D QAMARV RDGQK+PC
Sbjct: 699 FNRSPKTKSFVFLLSAKAGGVGINLIGASRLILYDLDWNPATDLQAMARVHRDGQKRPCH 758
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHD 677
+YR L+ G+++EK+ QRQ K L+ +VD + A FS +ELR LF+L+E+ TH
Sbjct: 759 IYRLLTQGALDEKIFQRQISKTGLAESIVDGKS-AASGFSQAELRDLFKLDESDDCQTHK 817
Query: 678 KIKCSRCVNGIQV 690
+ CS NG+ V
Sbjct: 818 LLGCSCGGNGLPV 830
>gi|157870081|ref|XP_001683591.1| putative DNA repair and recombination protein RAD54 [Leishmania
major strain Friedlin]
gi|68126657|emb|CAJ04466.1| putative DNA repair and recombination protein RAD54 [Leishmania
major strain Friedlin]
Length = 1127
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 257/613 (41%), Positives = 362/613 (59%), Gaps = 59/613 (9%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP A+VL+ D + + QV VVVDP++ + LRPHQ GVKF+++C+
Sbjct: 397 LHDPDREKAVVLFRA------DYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFDCI 450
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
TG R+ +G I+ADEMGLGKT+Q + ++T L+QG +P K ++V PSSLVKNWCN
Sbjct: 451 TGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGQPTARKCLVVTPSSLVKNWCN 510
Query: 223 EITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
E KWLG G V I S + D ++ F +LVISY+ R + L
Sbjct: 511 EFDKWLGEGAVRHFAIS-ESTPKGDRIISRFDGD------GDVLVISYDQLRKYIDRLSG 563
Query: 282 -NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
V LV+CDEGHRLKN E +T +A+ L + R++LSGTPIQNDL E+ ++V+FVN GI
Sbjct: 564 LRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRIILSGTPIQNDLSEFHAMVNFVNPGI 623
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG F + +E P+ G+D D ++ +R L + R ++RRT ++ YLP
Sbjct: 624 LGNRDLFARVFEEPVSLGRDPGCPDHLKSLGRDRARYLSVLTQRFILRRTQSINESYLPP 683
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K + V +++ + Q+ Y L +D V T L I++L+KLCNH DL
Sbjct: 684 KVDVTVFVRLGEKQELAYQKL--ADVVESAE---------CTPLVLISALRKLCNHMDLF 732
Query: 461 MDKIQ-------------------------TGADGFENA--MNILPTGYAASYKSGKLLI 493
D + + A G +++LP G ++ G L +
Sbjct: 733 HDAVHLSHQIGNSAGASAQQQQQAGRRRGRSSAAGESQGIPLSVLPKG----FRPGGLSM 788
Query: 494 ELSAKLMVLDTMLAVIKMTTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+ +K+ + +L +K + DK+V+VSN+TQTLD+ L + Y +LDGS IKK
Sbjct: 789 DCGSKMHFVSLVLDELKGNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQLDGSTPIKK 848
Query: 553 RAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R ++V+ FN S E +F+LSSKAGG GLNLIGANRL++FDPDWNPAND QAM RVWRDG
Sbjct: 849 RQQLVDYFNVPGSQEIVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQAMGRVWRDG 908
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
QKK F+YR LSTG+IEEK+ QRQ K+ LS+ VVD +ED +HF++ EL+SLF+ + +T
Sbjct: 909 QKKCVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKSLFKYKADT 968
Query: 672 ISDTHDKIKCSRC 684
+ DTHD + C+ C
Sbjct: 969 LCDTHDLLGCTSC 981
>gi|388582651|gb|EIM22955.1| hypothetical protein WALSEDRAFT_67840 [Wallemia sebi CBS 633.66]
Length = 916
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 247/594 (41%), Positives = 370/594 (62%), Gaps = 39/594 (6%)
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQ-VHVVVDPVLSNILRPHQREGVKFMYECVT 163
DP AP+ALV+ P +S + K++ + V VV+DP +S+ LRPHQREGVKFMYE V
Sbjct: 182 DPNAPDALVM---PPISTYVANKLNPKQFPLVDVVLDPHISSKLRPHQREGVKFMYEAVM 238
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G+R GCI+ADEMGLGKTLQ I L+WTLL+Q P+ P+I KA+IV P SLV NW
Sbjct: 239 GMRGHKGNGCILADEMGLGKTLQVIALIWTLLKQNPVTNSGPVIGKAMIVCPVSLVNNWK 298
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH- 280
E +KW+G + + EI + + + ++ +L+I YE R+ A VL
Sbjct: 299 KEFSKWIGQSKIGIFVGDKDVTEI--------KKFQQSRIHQVLIIGYEKLRTAAEVLKF 350
Query: 281 -KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ ++GL++CDEGHRLK+ ++T Q +RR++LSGTPIQNDL EY+ + F N G
Sbjct: 351 CQPQIGLIVCDEGHRLKS-SNKTSQVFEAFPTRRRIILSGTPIQNDLGEYYCMTEFCNPG 409
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+L T F+K+YETPI+R + S + +R E L + ++ ++RRT+ +L LP
Sbjct: 410 LLDTYASFKKKYETPIMRSRAPNCSKGDLEIGRQRSEGLSALNDQFVLRRTADILVNVLP 469
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE VV I T LQ LY L+++ V++ + KL L+ I L+ LCN P +
Sbjct: 470 PKTEFVVFIAPTKLQLRLYQQLVQTSIVQKVLD-----KLSGQHLALIGILRNLCNSPGI 524
Query: 460 VMDKIQTGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
+ + +Q + F++ + P + LS KL L +L +K T
Sbjct: 525 LYNIMQNNSTDTHKEFKFDSCKELFPVNVNPND------FNLSGKLKALGRLLKTLKNQT 578
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFML 571
++K+++VSN+T TL+L E ++ YK+ RLDGS KR ++V++FN++ + +FIF+L
Sbjct: 579 EEKVIVVSNFTTTLNLIETHCRVNKYKFCRLDGSTQQAKRQEIVDSFNRSPQAGKFIFLL 638
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNLIGA+RL++F+ DWNP+ND QAMAR+ RDGQ +P F+YRFL+TG+I+EK+
Sbjct: 639 STKSGGVGLNLIGASRLILFESDWNPSNDLQAMARIHRDGQTRPVFIYRFLTTGTIDEKI 698
Query: 632 MQRQAHKKALSSCVVDC---EEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
QRQ K LS+ ++ +++ F++ ELR+LF+++++TI THD + CS
Sbjct: 699 FQRQLTKIGLSNSLMGNTVEKKNETDSFTIEELRALFKVDDDTICGTHDLLDCS 752
>gi|401422802|ref|XP_003875888.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322492128|emb|CBZ27402.1| DNA repair and recombination protein RAD54,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 1130
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 260/621 (41%), Positives = 363/621 (58%), Gaps = 65/621 (10%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
+ LHDP A+VL+ D + + QV VVVDP++ + LRPHQ GVKF+++
Sbjct: 395 QPLHDPDREKAVVLFRA------DYKRDVHGRRQVSVVVDPIIGDKLRPHQIIGVKFLFD 448
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+TG R+ +G I+ADEMGLGKT+Q + ++T L+QG P K ++V PSSLVKNW
Sbjct: 449 CITGERMLGYHGAILADEMGLGKTIQTVATIYTCLKQGKHGHPTARKCLVVTPSSLVKNW 508
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
CNE KWLG G V I S + D ++ F +LVISY+ R + L
Sbjct: 509 CNEFDKWLGEGAVRHFAIS-ESTPKGDRIISRFDGD------GDVLVISYDQLRKYIDRL 561
Query: 280 HK-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
V LV+CDEGHRLKN E +T +A+ L + RV+LSGTPIQNDL E+ ++V+FVN
Sbjct: 562 SGLRSVELVVCDEGHRLKNAEVKTTKAVDMLPTRNRVILSGTPIQNDLSEFHAMVNFVNP 621
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG F + +E P+ G+D D ++ +R L + R ++RRT ++ YL
Sbjct: 622 GILGNRDLFARVFEEPVSLGRDPECPDHLKSLGRDRAHYLSMLTQRFILRRTQSINESYL 681
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K + V +++ + Q+ Y L +D V T L I++L+KLCNH D
Sbjct: 682 PPKVDVTVFVRLGEKQELAYQKL--ADVVESAE---------CTPLVLISALRKLCNHMD 730
Query: 459 LVMDKI----QTGADGFENA-----------------------------MNILPTGYAAS 485
L D + Q G +A +++LP G
Sbjct: 731 LFHDAVHLSHQIGNSAGASAQQQQQQQQQQQAGRRRGRSSAAGESKGIPLSVLPKG---- 786
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
+K G L ++ +K+ + +L +K + DK+V+VSN+TQTLD+ L + Y +L
Sbjct: 787 FKPGSLNMDCGSKMHFVSLVLDELKRNGEHDKLVIVSNFTQTLDIIAALCNSKQIAYFQL 846
Query: 545 DGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DGS IKKR ++V+ FN S E +F+LSSKAGG GLNLIGANRL++FDPDWNPAND QA
Sbjct: 847 DGSTPIKKRQQLVDYFNVPGSQEVVFLLSSKAGGVGLNLIGANRLILFDPDWNPANDAQA 906
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
M RVWRDGQKK F+YR LSTG+IEEK+ QRQ K+ LS+ VVD +ED +HF++ EL+S
Sbjct: 907 MGRVWRDGQKKRVFIYRLLSTGTIEEKIYQRQVSKQGLSANVVDMQEDSKQHFTLEELKS 966
Query: 664 LFQLEENTISDTHDKIKCSRC 684
LF+ + +T+ DTHD + C+ C
Sbjct: 967 LFKYKADTLCDTHDLLGCTSC 987
>gi|358058721|dbj|GAA95684.1| hypothetical protein E5Q_02341 [Mixia osmundae IAM 14324]
Length = 2010
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 259/655 (39%), Positives = 380/655 (58%), Gaps = 47/655 (7%)
Query: 48 EPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPT 107
+P K+P+ + + ++L P + G ST + + + +DP
Sbjct: 416 KPRPKMPLIPTANASANKAVSELLQGGSVAPTDFFKGSSKSTSRSTFKAHSSLASRYDPK 475
Query: 108 APNALVLYTPPQLSAHDLLKIDKDKIQV--HVVVDPVLSNILRPHQREGVKFMYECVTGV 165
A A+VL PP +L +K + VV+DP+L LRPHQ+EG++FMYECV G
Sbjct: 476 ADGAVVLTRPPA----ELFARNKQTATLVNDVVLDPLLCKHLRPHQKEGIQFMYECVMGF 531
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP--LIDKAIIVAPSSLVKNWCNE 223
+ E GCI+ADEMGLGKT+Q I L+WTLL+Q P A +I +A+IV P +LVKNW E
Sbjct: 532 KSE-GTGCILADEMGLGKTVQSIGLIWTLLKQTPYATSGSVIGRALIVCPVTLVKNWSRE 590
Query: 224 ITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK- 281
+KWLG R+ D S ++++ + +L+I YE R+ L K
Sbjct: 591 FSKWLGRERIGVFTADAKSN----------IKSFTKSKTYAVLIIGYERLRTVVEDLEKC 640
Query: 282 -NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
+G+++CDEGHRLK+ ++T QAL L A++RV+L+GTPIQNDL E ++V F+ G
Sbjct: 641 SPPIGVIICDEGHRLKSAGAKTTQALRALSAEKRVILTGTPIQNDLSELHTMVDFIIPGA 700
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
L + F+K +E PIL+ ++ AS R R +QL I ++RRTS +++++LP
Sbjct: 701 LDSYATFKKCFEVPILKSREPHASSEVRGLGQARSDQLASIARSFVLRRTSEVIAQFLPP 760
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K E V+ ++ T LQ LY ++++ AVR G G L I++LKKLCN P L+
Sbjct: 761 KQEYVLFVRPTQLQIRLYKKILETPAVRAIFSGK-----GGNHLVLISALKKLCNSPGLL 815
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLL--IELSAKLMVLDTMLAVIKMTTDDKIV 518
+ ++ ++A + + A SG + + LS K + L +L IK T++K+V
Sbjct: 816 VKQLDQ--QHVKDAEDEVTESIAEELPSGLDVNDVHLSGKALALANLLESIKEKTEEKVV 873
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAG 576
LVSN+TQTL++ E K R Y Y RLDG+ K R +VETFN+ S +FIF+LSSK+G
Sbjct: 874 LVSNFTQTLNILEAFCKTRRYGYCRLDGATAQKARQGIVETFNRASQKAQFIFLLSSKSG 933
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GLNLIGA+RLV+FD DWNP+ND QAMAR+ RDGQK+PC +YR L+TG+++EK+ QRQ
Sbjct: 934 GAGLNLIGASRLVLFDSDWNPSNDLQAMARIHRDGQKRPCHIYRLLATGTLDEKIFQRQI 993
Query: 637 HKKALSSCVVDCE--------------EDVARHFSMSELRSLFQLEENTISDTHD 677
K+ L+ ++ E + FS+ EL+++F L T THD
Sbjct: 994 IKQGLAGSLMQGEGSTKTSGKQSGNSKSGTSDAFSLDELKAIFALHTETACHTHD 1048
>gi|67967643|dbj|BAE00304.1| unnamed protein product [Macaca fascicularis]
Length = 644
Score = 457 bits (1175), Expect = e-125, Method: Compositional matrix adjust.
Identities = 267/642 (41%), Positives = 376/642 (58%), Gaps = 57/642 (8%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L LRPHQ+EG+ F+YECV G+R+ G I+ADEMGLGKTLQCI+L+WTL
Sbjct: 20 VDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTL 79
Query: 195 LRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSF 252
QGP KP+I K +IV P SLV NW E KWLG R+ +D D+K+ F
Sbjct: 80 QCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQ------DHKVEEF 133
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+++ +L+ISYE + + L++CDEGHRLKN +T AL+ L +
Sbjct: 134 IKSI----FYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTAALISLSCE 189
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
+R++L+GTP+QNDL E+F+L+ FVN GILG+ +RK YE PI+ ++ AS+ E+
Sbjct: 190 KRIILTGTPVQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGE 249
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
R +L + ++RRT +++KYLP K E V+ + LQ ELY L+ S VR ++
Sbjct: 250 RRATELACLTGLFILRRTQEIINKYLPPKIENVIFCRPGALQIELYRKLLNSQVVRFCLQ 309
Query: 433 G-GENTKLGMTALSSITSLKKLCNHPDLVMDKIQ----TGADG------FENAMNILPTG 481
G EN+ L I +LKKLCNHP L+ + I+ + D ++ +++ P
Sbjct: 310 GLLENSP----HLICIGALKKLCNHPCLLFNSIKEKECSTCDKNEEKSLYKGLLSVFPAD 365
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
Y + K S KL VL +LAVI ++ +K+VLVSNYTQTL++ + + K GY
Sbjct: 366 YNPLLFTEK----ESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNVLQEVCKRHGYA 421
Query: 541 YVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
Y RLDG I +R ++V+ FN + S+ FIF+LSSKAGG GLNLIG + L+++D DWNPA
Sbjct: 422 YTRLDGQTPISQRQQIVDGFNSQHSSVFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPAT 481
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSM 658
D QAM+RVWRDGQK P +YR L+TG+IEEK+ QRQ K+ L VVD + FS+
Sbjct: 482 DIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSV 541
Query: 659 SELRSLFQLEENTISDTHDKIKCSRCVNGI---------------QVKPPPLESDCTDDL 703
EL++LF L E++ THD + C C + Q+ P +S+ L
Sbjct: 542 EELKNLFTLHESSDCVTHDLLDC-ECTGEVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPL 600
Query: 704 SC-----WHHVTEKRW-LVDPILKHCWGAGVSFVFYQHSTKA 739
S W H + + DP L+ VSF+F +T+A
Sbjct: 601 SMSQLKQWKHFSGDHLKITDPFLERI-TENVSFIFQNITTQA 641
>gi|354482677|ref|XP_003503524.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Cricetulus griseus]
Length = 950
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 265/599 (44%), Positives = 358/599 (59%), Gaps = 29/599 (4%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K +DP PN+LV+ P + H L V VVVDP L LR Q+EG+ F+YE
Sbjct: 293 KPRYDPCTPNSLVMPRPDK--NHQWLFNRNCFPLVDVVVDPHLVRHLRSFQKEGIIFLYE 350
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R G I+ADEMGLGKTLQCI+L+WTL Q KP+I + +IV P SLV N
Sbjct: 351 CVMGMRENGRCGAILADEMGLGKTLQCISLIWTLQCQDXXGGKPVIKRTLIVTPGSLVNN 410
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 411 WRKEFQKWLGSERIKTFTVDQ------DHKVEEFIKS----TFYSVLIISYEMLLRSLDQ 460
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL L ++RV+L+GTP+QNDL E+F+LV FVN
Sbjct: 461 IKTIKFDLLICDEGHRLKNSSIKTTAALFSLPCEKRVILTGTPVQNDLQEFFALVDFVNP 520
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ +S E+ R +L + R ++RRT +++KYL
Sbjct: 521 GILGSLPSYRKIYEEPIIMSREPSSSKEEKELGERRAVELSCLTGRFILRRTQEVINKYL 580
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S +VR ++G EN+ T L I +LKKLCNHP
Sbjct: 581 PPKIENVVFCQPVALQTELYRKLLSSQSVRFCLQGLLENS----THLICIGALKKLCNHP 636
Query: 458 DLVMDKIQTG--ADGFEN-AMNI---LPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-K 510
L+ +++ + EN MN+ L T Y Y + S KL VL +LA I +
Sbjct: 637 CLLFSSVKSKEFSSSDENEEMNLCKGLLTLYPTGYDPLQFSENESGKLQVLVKLLAAIHE 696
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIF 569
+ +K+VLVSNY QTL++ E + K GY RLDG + +R ++V+ FN K S +FIF
Sbjct: 697 LRPTEKVVLVSNYRQTLNILEGICKRHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIF 756
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEE
Sbjct: 757 LLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEE 816
Query: 630 KMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
K+ QRQ K+ LS VVD + FS+ EL+ LF L EN+ THD + C C G
Sbjct: 817 KIYQRQISKQGLSGAVVDLTKSSEHIQFSVEELKDLFTLHENSQCVTHDLLDC-ECTGG 874
>gi|345488256|ref|XP_001601964.2| PREDICTED: DNA repair and recombination protein RAD54B [Nasonia
vitripennis]
Length = 898
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 242/583 (41%), Positives = 352/583 (60%), Gaps = 30/583 (5%)
Query: 106 PTAPNALVLYTPPQLSAHDLLKID----KDKIQVH-VVVDPVLSNILRPHQREGVKFMYE 160
P +L P + H L ++ D ++H V VD L+++LRPHQREG+ F+Y+
Sbjct: 262 PVKSGSLHFNYEPLIMPHPPLDVEWCEGNDDKKIHEVSVDGCLASVLRPHQREGIVFLYK 321
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+ G+ G I+ADEMGLGKTLQCI+L+WTLL++GP KP++ + +IV+PSSL NW
Sbjct: 322 CIMGMNSAHHKGAILADEMGLGKTLQCISLIWTLLKKGPSGKPVLKRVLIVSPSSLCGNW 381
Query: 221 CNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E +WLG ++A ++G K ++ + + P +++I YE F + +
Sbjct: 382 NKEFKRWLGTMKIAPYVVEGKQK----------VKDFTKTPRACVMIIGYEMFVRNIDDI 431
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ L++CDEGHRLKN E +T + L L+ KRR+L++GTP+QNDL E+++L +FVN G
Sbjct: 432 NNLNFDLLICDEGHRLKNSEVKTLKFLSQLRCKRRILVTGTPVQNDLTEFYNLANFVNPG 491
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+ GT +++ YE I+ Q + A + E ER ++L ++RRT+ L++KYLP
Sbjct: 492 VFGTPGDYKSYYEHKIVASQRATADEDEVALGQERAKELYEKSKSFILRRTNTLINKYLP 551
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K E VV K T Q LY+ LI R++ G + L+ IT+LKK+CNHP L
Sbjct: 552 QKHELVVFCKPTVEQNNLYS-LITDYWFNRSLIDG-----NVIPLTVITALKKVCNHPYL 605
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ ++ + + +PT +A S S+K+ V+ + IK T ++K+VL
Sbjct: 606 FTSE---KSNILDEVLPSVPTNLSAINTS----YSYSSKVKVVQAIFQAIKRT-NEKVVL 657
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCG 579
VS +TQTLD E++ G ++ RLDG R K+V+ FN N F F+LS+KAGG G
Sbjct: 658 VSYFTQTLDFLEKVCCTEGLQFCRLDGHTPAASRTKLVDRFNSKDNSFFFLLSAKAGGVG 717
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
LNL+GA+RL++FD DWNPAND QAMAR+WRDGQK+ F+YR L+TG+IEEK+ QRQ K
Sbjct: 718 LNLVGASRLILFDSDWNPANDAQAMARIWRDGQKRSVFIYRLLTTGTIEEKIYQRQISKT 777
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
LS VVD + S SEL+ LF L+ T S THD + CS
Sbjct: 778 GLSEAVVDANHISSLKLSASELKDLFTLDSQTSSVTHDLMDCS 820
>gi|291233872|ref|XP_002736874.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Saccoglossus kowalevskii]
Length = 678
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 217/342 (63%), Positives = 265/342 (77%), Gaps = 7/342 (2%)
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN 455
KYLPVK EQVVC ++TD+Q+ LY + + A + N K+ M++LSSIT LKKLCN
Sbjct: 336 KYLPVKVEQVVCCRLTDVQRALYNGFVSTKAAECQVTS--NGKVSMSSLSSITQLKKLCN 393
Query: 456 HPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
HP L+ +K G +GF+ A+++ P+ + A + ELS K+ VLD +LAV + T+ D
Sbjct: 394 HPSLIYNKCVDGEEGFDGALDLFPSNFNAK----GVQPELSGKMQVLDYILAVTRTTSSD 449
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSK 574
K+VLVSNYTQTLDLFE+L RGY YVRLDGSM+IKKRAK+VE FN +S E+IFMLSSK
Sbjct: 450 KVVLVSNYTQTLDLFEKLCHNRGYLYVRLDGSMSIKKRAKMVERFNNPSSAEYIFMLSSK 509
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK C++YR LSTG+IEEK+ QR
Sbjct: 510 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKQCYIYRLLSTGTIEEKIFQR 569
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
QAHKKALSSCVVD EEDV RHFS+ EL+ LF+L ENT SDTHDK KC RCVN IQV+PPP
Sbjct: 570 QAHKKALSSCVVDNEEDVERHFSLDELKDLFKLNENTQSDTHDKFKCRRCVNNIQVRPPP 629
Query: 695 LESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHS 736
SDC++DLS W+H +K+ ++D +LK W +SFVF+ S
Sbjct: 630 DGSDCSNDLSQWNHCPDKKGIIDQVLKSSWCDNISFVFHHRS 671
Score = 328 bits (840), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 177/287 (61%), Positives = 211/287 (73%), Gaps = 10/287 (3%)
Query: 37 RKPLGSVDNE-DEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVR 95
RKPL + N+ D+ +S P T S HE++IR+IL++PFK+PI NY G K LGVR
Sbjct: 45 RKPLCPIMNDSDDEDSDAP-TPTAGSSHEDMIRRILSRPFKIPIPNYKGPVMG-KVLGVR 102
Query: 96 REGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGV 155
R+GAR+ LHDP AL+LY+PP LSAH+ L ++K+ VHVVVDPV+S +LRPHQREGV
Sbjct: 103 RQGARRPLHDPDEEGALILYSPPVLSAHEQLTVNKENQPVHVVVDPVVSKVLRPHQREGV 162
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSS 215
KFM++CVTG RIE +YGCIMADEMGLGKTLQCITLMWTLL+Q P II+
Sbjct: 163 KFMWDCVTGRRIEKSYGCIMADEMGLGKTLQCITLMWTLLKQSP-------DYIIILVFL 215
Query: 216 LVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
L NW NEI+KWLG R++ + ID GSKA+ID L FM GRR +PIL+ISYETFR H
Sbjct: 216 LENNWYNEISKWLGSRISPIAIDSGSKADIDRNLTHFMTQNGRRIAHPILIISYETFRLH 275
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
ASVLHK VGLVLCDEGHRLKN E+QTY AL GL KRRVLL P+
Sbjct: 276 ASVLHKGAVGLVLCDEGHRLKNSENQTYLALSGLNCKRRVLLDCCPL 322
>gi|384252522|gb|EIE25998.1| hypothetical protein COCSUDRAFT_40188 [Coccomyxa subellipsoidea
C-169]
Length = 1034
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 283/708 (39%), Positives = 384/708 (54%), Gaps = 126/708 (17%)
Query: 112 LVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
LVL+ PP + V VD +L+ LRPHQREGV FM+ECVTG+R
Sbjct: 186 LVLWEPPPYADGS-----------PVAVDGMLTKWLRPHQREGVAFMFECVTGLRDFGGN 234
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPL---AKPLIDKAIIVAPSSLVKNWCNEITKWL 228
GCI+AD+MGLGKTLQ I+L+WTLL+ G +PL + II P+SLV NW +E KWL
Sbjct: 235 GCILADDMGLGKTLQGISLLWTLLQSGHALLGGEPLAKRVIICCPTSLVSNWDSECGKWL 294
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP--VNPILVISYETFRSHASVLH-KNEVG 285
GRV LP+ S+ ++ + ++ F+ RP + +L++SYETFR HA L ++
Sbjct: 295 KGRVRTLPLSESSRDDVISSISDFL-----RPNTMYQVLILSYETFRLHAERLKGEHACD 349
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L++CDE HRLKN ++ +AL L KRRVLLSGTP+QN L E++++V+F N G+LGT
Sbjct: 350 LLICDEAHRLKNDQTLINKALDSLACKRRVLLSGTPMQNHLDEFYAMVNFCNPGVLGTPS 409
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
+FR+ YE PI+ G++ AS+ K ER +L IV +V
Sbjct: 410 QFRRHYEGPIVAGREPDASEEVVAKGAERSSELSAIV--------------------VEV 449
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
VC + + LQ ELY + + S+A +R + E TK +AL++I +L+KLC HP L+ D I
Sbjct: 450 VCCRPSPLQVELYNHFLASNAAQRVLS-AEKTKGKASALTAINALRKLCGHPKLIYDLIH 508
Query: 466 -------TGADGFE------------------------------------NAMNILPTGY 482
ADGF+ + ILP G+
Sbjct: 509 PTSGKAPAEADGFKASRVIIPFCMADLWTEARKDCAQFFPPGLFDDGRAGRSRGILPQGW 568
Query: 483 -AASYKSGKLL----IEL------SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
A S SG+ + L + K+ VL MLA+++ T ++IV+VSN TQ LDL
Sbjct: 569 DALSGTSGRPFSLCCLSLCTGKFPAGKMAVLGCMLALLR-PTGERIVVVSNSTQVLDLIG 627
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
+L + R Y +RLDG+ T+KKRAK+V+ FN +F+F+LSSKAGGCG+NLIG NRLV+F
Sbjct: 628 QLCRERSYPALRLDGTTTLKKRAKMVQQFNTELGQFVFLLSSKAGGCGINLIGGNRLVLF 687
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC--- 648
DPDWNPAND QA ARVWRDGQKK +VY+FL+TG+IEEK+ QRQ K+ L V +
Sbjct: 688 DPDWNPANDKQAAARVWRDGQKKRVYVYKFLTTGTIEEKVFQRQLAKEGLQQVVNNTGAA 747
Query: 649 ------------EEDVARHFSMSELRSLFQLEENTISDTHDKI--------KCSRCVNGI 688
A S +LR LF L +T SDT D + N
Sbjct: 748 ASASAGSDAGDGGGIAAAAMSAEDLRDLFTLRLHTASDTFDSMCDNDDDEAPDDEGSNEG 807
Query: 689 QVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWG----AGVSFVF 732
+ S +DL W T + D I+ H G VSFVF
Sbjct: 808 SAAAVDIGSPAEEDLKSWGQHTSTSTVPDAIM-HTIGQQLPGQVSFVF 854
>gi|397500919|ref|XP_003821150.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B [Pan paniscus]
Length = 910
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 280/674 (41%), Positives = 387/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYMPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ + G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGSCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ F
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFX 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 834
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 835 EVNTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 893
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 ENVSFIFQNITTQA 907
>gi|332019859|gb|EGI60320.1| DNA repair and recombination protein RAD54B [Acromyrmex echinatior]
Length = 857
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 241/566 (42%), Positives = 350/566 (61%), Gaps = 25/566 (4%)
Query: 118 PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
P L++ +L+ ++ +I +VD L LR HQR G+ F+YEC+ G+++ + +G I+AD
Sbjct: 253 PYLNSTELMNQEEQEI----LVDSCLVAKLREHQRHGIVFLYECLMGLKVPNYFGAILAD 308
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI 237
EMGLGKTLQCITL+WT+L++GP KP+I + +IV PSSL NW E KWLG R P
Sbjct: 309 EMGLGKTLQCITLIWTMLKKGPYGKPIIKRVLIVTPSSLCNNWEKEFVKWLG-RHRIFPY 367
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
G K NK F+ + P N I++ISYE F + +++ L++CDEGHRLKN
Sbjct: 368 VIGGK----NKPKDFI----KYPRNSIMIISYEMFIKCHTEINEMTFDLIVCDEGHRLKN 419
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+ + L + K+R++L+GTPIQNDL E+++L+ FVN GILGT E++ YE PI+
Sbjct: 420 SNIKAAKMLNEINCKKRIVLTGTPIQNDLKEFYALIDFVNPGILGTPNEYKSYYEEPIIA 479
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
Q S A D + NER +L ++RR+ ++KYLP K E V+ +T QK+L
Sbjct: 480 AQYSSADDDVLSLGNERSAELYKHTKSFILRRSQKAINKYLPYKYEIVLFCSLTKKQKDL 539
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y+ + + + ++ N L + IT+LKK+CNHP+L +++ + +
Sbjct: 540 YSLITDAWFNKICLEDKSNIHLSI-----ITALKKICNHPNLFLNEEEKALYDV-----L 589
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
Y + K + E K+ ++ T++ +K TD+K+VLVS YTQTLDL E + +
Sbjct: 590 SKVSYLSQIKRDENFTEYCGKVTIVQTLMRNLK-KTDEKLVLVSYYTQTLDLLETICNME 648
Query: 538 GYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
K++RLDG+ + R K+ E FN +T N + +LS+KAGG GLNL GA+RLV+FD DWN
Sbjct: 649 RLKFLRLDGATSSTIRLKITEQFNTQTDNSKVLLLSAKAGGVGLNLPGASRLVLFDSDWN 708
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PA+D QAMAR+WRDGQK+ ++YR L+TG+IEEK+ QRQ K LS VVD +
Sbjct: 709 PASDMQAMARIWRDGQKRNVYIYRLLTTGTIEEKIYQRQISKANLSETVVDLNYLGSLKL 768
Query: 657 SMSELRSLFQLEENTISDTHDKIKCS 682
S +EL+ LF L +T+S THD I CS
Sbjct: 769 STAELKDLFTLASDTMSLTHDLINCS 794
>gi|378730751|gb|EHY57210.1| DNA repair and recombination protein RAD54B [Exophiala dermatitidis
NIH/UT8656]
Length = 970
Score = 450 bits (1158), Expect = e-123, Method: Compositional matrix adjust.
Identities = 251/601 (41%), Positives = 359/601 (59%), Gaps = 52/601 (8%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP A A+V P + V VV+DP+L +LRPHQ+EGV+F+YECV
Sbjct: 252 HDPNAAGAVVFKRPKHPPP--------GRQTVDVVLDPLLGKLLRPHQKEGVQFLYECVM 303
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G+R GCI+AD+MGLGKTL I L+WTLLRQ P+ + P+I KA+IV P SL++NW
Sbjct: 304 GLREYGGQGCILADDMGLGKTLTTIALLWTLLRQSPVHRGPPVIRKALIVCPVSLIRNWK 363
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ L E +++ GR V +++I Y+ R A L
Sbjct: 364 REFRKWLGSDRLGVL--------EFEDQSTHVRDFDGR--VYQVMIIGYDRLRMVADDLA 413
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ + +V+CDEGHRLK +++ QA+ L +RR++LSGTPIQNDL E++++V+FVN G
Sbjct: 414 QGHPIDIVICDEGHRLKTMKNKNAQAIESLNTRRRIILSGTPIQNDLGEFYAMVNFVNDG 473
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
LG+ + F + +E PI+R + AS+ E + + E+L + ++RRT+ +LS +LP
Sbjct: 474 CLGSQKGFIRDFEKPIIRSRQPDASEEEIERGRDASEELARTTSPFILRRTADILSDFLP 533
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q ++Y N++KS ++ E +A IT LKKLCN P L
Sbjct: 534 PKTEYVLFCKPTQAQTKIYRNILKSAMFHSALRSSE------SAFQLITILKKLCNSPAL 587
Query: 460 VMDKI----QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
+ K T + +LP G + Y + LS K+ +LD +L I+ T++
Sbjct: 588 MNPKYGNEDSTPSSSLTTLNEMLPEGLSKLYHN-----SLSCKIRLLDELLQQIRANTNE 642
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN--KTSNEFIFMLSS 573
K+VL+SNYT TL+L E+L Y+RLDGS+ KKR +V+ FN K++ F F+LS+
Sbjct: 643 KVVLISNYTSTLNLIEQLLVNSNLPYLRLDGSIAAKKRQGLVDQFNNSKSTQSFAFLLSA 702
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGG GLNLIGA+RL++FD DWNPA DDQA+AR+ R GQK+ C +YRFL G IEE++ Q
Sbjct: 703 KAGGVGLNLIGASRLILFDVDWNPATDDQAVARIHRQGQKRHCKIYRFLIKGGIEERIWQ 762
Query: 634 RQAHKKALSSCVVD----CEEDVARH---------FSMSELRSLFQLEENTISDTHDKIK 680
RQ K+AL+S ++ +A+ FS EL+ LF+L+E THD I+
Sbjct: 763 RQVVKRALASSIMQGGSAASSGLAKSSGKGGQITTFSQDELKDLFRLDETDGLRTHDLIE 822
Query: 681 C 681
C
Sbjct: 823 C 823
>gi|440793758|gb|ELR14933.1| DNA repair and recombination protein RAD54B, putative [Acanthamoeba
castellanii str. Neff]
Length = 689
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 237/550 (43%), Positives = 340/550 (61%), Gaps = 48/550 (8%)
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
+++VL+ P S D + VVVDP + NIL+PHQREGVKF+YEC G++
Sbjct: 128 DSVVLFNPTAAS-------DPNGPLTAVVVDPYVGNILQPHQREGVKFLYECTMGLK-GP 179
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG 229
GCI+ADEMGLGKTLQ ITL+WTLL+QGP P KA+++ P+SL KNW +E+ +WLG
Sbjct: 180 GRGCILADEMGLGKTLQAITLIWTLLKQGPNGTPASKKALVITPTSLTKNWYHEVKRWLG 239
Query: 230 -GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-NEVGLV 287
R+ AL I G A + + + P P+L+ISYE FR HA+ L + LV
Sbjct: 240 LERLHALVI--GQAASKKEETLKVLDEFKTSPHRPLLIISYEQFRIHATFLQGVAGIDLV 297
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDEGHRLKN +++ + + GL+ +RRV+++GTPIQNDL E+F++V+F N G + ++F
Sbjct: 298 ICDEGHRLKNADARITKCINGLETRRRVIITGTPIQNDLEEFFTMVNFCNPGFMDL-KKF 356
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
R + TPI+ G+D A+ ++ ++ R L+ +IRRT LL +YLP + EQVV
Sbjct: 357 RDVFATPIVLGRDPNATPQQKLESQSRSTALMKRTESFIIRRTKDLLRQYLPPRVEQVVF 416
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT- 466
+++ LQ +LY ++S TM ALS I SL+KLCNHP + K +
Sbjct: 417 CRLSSLQADLYRQYLRS-----TMAA---------ALSCIISLRKLCNHPCAIFPKPEVI 462
Query: 467 ---------GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ + P + A+ IELS K+ LD +L VI+ TT D++
Sbjct: 463 TLLKLQMVEAEPEMKKVAALFPEDFTATTHD----IELSGKMEALDKLLGVIRTTTKDRV 518
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGG 577
V+VSN+ Q+LD+ + L K R Y++VRLDGS +R +V+ FN ++++ +G
Sbjct: 519 VIVSNFKQSLDVMQTLCKKRSYRFVRLDGSTPTGQRQNIVDHFNDQTSDY-------SGN 571
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
G NL+G+NR+V+FDPDWNPAND QAM RVWR GQKK C++YRF STG+IEEK+ QRQ
Sbjct: 572 VGFNLVGSNRIVLFDPDWNPANDAQAMGRVWRYGQKKKCWIYRFASTGTIEEKIFQRQVA 631
Query: 638 KKALSSCVVD 647
K+ LS+ ++D
Sbjct: 632 KEGLSNAIMD 641
>gi|345563719|gb|EGX46704.1| hypothetical protein AOL_s00097g452 [Arthrobotrys oligospora ATCC
24927]
Length = 920
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 261/614 (42%), Positives = 370/614 (60%), Gaps = 44/614 (7%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ 134
FK P+L+ G + + ++ AR DP+A ALV+ L K+K
Sbjct: 215 FKPPLLS----GTTVTKINPQKPVAR---FDPSAEGALVM--------KRLEISSKNKTV 259
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VVVDP++S LRPHQREGV F+YE V G+R + G I+ADEMGLGKTLQ I L+WTL
Sbjct: 260 VDVVVDPIISRHLRPHQREGVSFLYEAVMGMRPYEGRGAILADEMGLGKTLQTIALLWTL 319
Query: 195 LRQGPLAK--PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNS 251
L+Q P+ P++ KA+IV P SL+ NW E KWLG R+ DG S
Sbjct: 320 LKQNPIYNQGPVVKKAMIVCPVSLINNWRREFKKWLGNERIHVFVADGKSN--------- 370
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
++ + PV ++++ YE RS L + +V +++ DEGHRLK E+++ QA+ L
Sbjct: 371 -VRDFTHGPVYNVMIVGYERLRSIQDKLKQCQVDIIIADEGHRLKTAENKSAQAIRSLAT 429
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
RRV+LSGTP+QNDL E+F + FVN GIL F+KQ+E PI++ Q A A++
Sbjct: 430 PRRVVLSGTPLQNDLREFFVMADFVNPGILENYSTFKKQFENPIVKSQQPEALKADKELG 489
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
N R L ++N+ ++RRT+ +L+KYLP KT+ V+ + T Q ELY +I + +R M
Sbjct: 490 NARKASLAELMNKFVLRRTAKILTKYLPPKTDVVLFCRPTKQQLELYQAIINTSVAKRQM 549
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
+ TAL IT LKK+CN L+ K + D + + +IL A G
Sbjct: 550 GSMD------TALQLITLLKKVCNSTSLLKPKGKED-DEAKLSNSILEEAKVA----GSA 598
Query: 492 LI--ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
L+ S KL VL+ +L +K TT +K+VLVSNYT TLD+ ER+ +G+ ++RLDG
Sbjct: 599 LVNSNSSGKLKVLEKLLVTLKETTQEKVVLVSNYTSTLDILERMLNSKGFHHLRLDGKTP 658
Query: 550 IKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
KR +V+ FN+ S++ F F+LSSK+GG GLNLIGA+RL +FD DWNPA D QAMARV
Sbjct: 659 TNKRQDLVDKFNRVSSDVAFAFLLSSKSGGAGLNLIGASRLFLFDSDWNPATDLQAMARV 718
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
RDGQK ++YR ++TG I+EK+ QRQ K+ L+ V+D ++ +F+ +EL+ LF L
Sbjct: 719 HRDGQKSHVYIYRMITTGCIDEKIYQRQITKQGLADSVMD-QKAGGSNFTSAELKDLFGL 777
Query: 668 EENTISDTHDKIKC 681
+ T +THD + C
Sbjct: 778 DTETTCNTHDLLGC 791
>gi|403160793|ref|XP_003321236.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170399|gb|EFP76817.2| hypothetical protein PGTG_02278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1065
Score = 449 bits (1156), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/645 (39%), Positives = 386/645 (59%), Gaps = 45/645 (6%)
Query: 94 VRREGARKALHDPTAPNALVLYTPPQ--LSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQ 151
++R DP A ALVL P L HDL ++ V VVVDP ++ LRPHQ
Sbjct: 360 IKRTSHTGPKFDPQAEGALVLTKPSTAWLLKHDL----QNAAIVDVVVDPSIARSLRPHQ 415
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAI 209
+G+KFMYEC G+R +GCI+ADEMGLGK++Q I+L+WTLLRQ P++ P+I +A+
Sbjct: 416 VDGLKFMYECTMGLREVGGHGCILADEMGLGKSIQAISLLWTLLRQNPISGQGPVIKRAM 475
Query: 210 IVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
IV P +LVKNW EI KWLG R+ DG + D K + Y +LVI
Sbjct: 476 IVCPVTLVKNWKREIHKWLGRSRLNVFTADG----KCDFKQFTCSLYYN------VLVIG 525
Query: 269 YETFRSHASVLHK--NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
YE R+ + ++ +GL++ DEGHRL++ E++T QAL LK KRRV+LSGTPIQN+L
Sbjct: 526 YEKLRTLSKEVNSIYPPIGLIIADEGHRLRSIEAKTTQALRSLKTKRRVVLSGTPIQNNL 585
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
EY+++V FVN GIL + F+K++E PIL+ ++ C + +R++ R E+L + +
Sbjct: 586 TEYYAMVDFVNPGILDDYRTFKKKFEQPILKSREPCCNPVQRSEGEARAEELAKMSRHYV 645
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RR S ++ ++LP + + V I T +Q+ +Y ++ S R G + L +
Sbjct: 646 LRRGSEVIQEHLPPRHDYCVFISPTTVQRNIYEAVLDSPETRAIFSGDISQHLVL----- 700
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
+ +LK LCN P L+M++ + G + + + P + ++LS KL+ L L
Sbjct: 701 MNTLKLLCNSPGLLMNEYSIKSLG-QISSTLFPAWVT------REDVQLSGKLIALAKFL 753
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--S 564
++K ++KI+LVSN+T+TLD+ E K Y + RLDG +R +V+ FN++ S
Sbjct: 754 DILKKKNNEKIILVSNFTKTLDIVESHCKASHYPFCRLDGKTAQNQRDNIVQVFNRSSAS 813
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+FIF+LSSK+GG GLNLIGA+RL++FD DWNPA D QAMAR+WR GQ+KPC +YRFL+T
Sbjct: 814 AQFIFLLSSKSGGVGLNLIGASRLILFDGDWNPATDLQAMARIWRQGQQKPCHIYRFLTT 873
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCE---EDVA---RHFSMSELRSLFQLEENTISDTHDK 678
G+I+E + QRQ K L++ ++ E+ A F+ +EL+ +F+L +T THD
Sbjct: 874 GTIDECIFQRQVTKIGLATDLMSAPKAGEETAGGGNTFTKNELKRVFELHSDTDCYTHDL 933
Query: 679 IKCSRCVNGIQVKPPP---LESDCTDDLSCWHHVTEKRWLVDPIL 720
++C +C+ ++ P E + D ++C H + L D L
Sbjct: 934 LEC-QCLENKSIEEPEGWKEEDEREDPMACLDHSDSEASLPDADL 977
>gi|383847118|ref|XP_003699202.1| PREDICTED: DNA repair and recombination protein RAD54B-like
[Megachile rotundata]
Length = 856
Score = 449 bits (1155), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/586 (41%), Positives = 354/586 (60%), Gaps = 34/586 (5%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K H+P L PP ++ + + + K + V VD L N+LR HQR G+ F+YE
Sbjct: 241 KLTHNP-------LIMPPMYTSQNWAENEISKDEKEVSVDACLVNVLRQHQRYGIIFLYE 293
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
C+ G++ + YG I+ADEMGLGKTLQCITL+WTLL++GP P++ +IV PSSL NW
Sbjct: 294 CIMGIKTSNYYGAILADEMGLGKTLQCITLVWTLLKKGPYGSPVLKTVLIVTPSSLCNNW 353
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E WLG R+ ++ +K ++ + ++ N +++ISY+ +
Sbjct: 354 NKEFKHWLGFHRLCPYVVNAKNK----------LKDFKKQARNSVVIISYDMLIRCEEEI 403
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ L++CDEGHRLKN E + + L + KRR+LL+GTPIQNDL E+F+LV+FVN G
Sbjct: 404 EQINFDLIICDEGHRLKNNEIKAAKLLSNINCKRRILLTGTPIQNDLQEFFALVNFVNPG 463
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILG+ EF+ YE PI+ + A+ + + ER +L ++RRT ++KYLP
Sbjct: 464 ILGSNNEFKNYYENPIVASKCPHAAYSVASLGTERATELHEKTRSFILRRTQDTINKYLP 523
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K E VV +++D Q++LY+ L+ +++ N + L+ IT+LKK+CNHP L
Sbjct: 524 SKHELVVFCRLSDEQEKLYS-LVTDTWFNKSVLPNSN----VPHLTVITTLKKICNHPKL 578
Query: 460 VMDKIQTGADGFEN--AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
++ + F N A+N+ T Y S + + K+ V+ T++ +K TD+K+
Sbjct: 579 FYNE----KNEFWNNSAINLNGTTNICKYTSRE---QYCGKISVVQTLMKNLK-NTDEKL 630
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAG 576
VL+S YTQTLDL E + G ++RLDGS R+K++E FN K N IF+LS+KAG
Sbjct: 631 VLISYYTQTLDLLETVCSTEGLHFLRLDGSTPATTRSKIIEQFNSKNHNSKIFLLSAKAG 690
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GLNL GA+RL++FD DWNPA+D QAMAR+WRDGQKK ++ R L+TG+IEEK+ QRQ
Sbjct: 691 GVGLNLFGASRLILFDSDWNPASDSQAMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQV 750
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
K LS VVD + SM+EL+ LF L T THD ++CS
Sbjct: 751 SKAGLSETVVDSNCFDSLKLSMNELKDLFTLTTGTNCLTHDLMQCS 796
>gi|225681829|gb|EEH20113.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1000
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 254/586 (43%), Positives = 354/586 (60%), Gaps = 37/586 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
H+P+ P A+V+ P + K K V VV+DP+L LR HQREGV+F+YECV
Sbjct: 296 HNPSLPGAVVMRRPES--------VPKGKEIVDVVLDPLLGKHLREHQREGVRFLYECVM 347
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A P+I KA+IV P +L+ NW
Sbjct: 348 GMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAPPVIKKALIVCPVTLIDNWK 407
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D D + Q+Y +++I YE R+ L
Sbjct: 408 KEFRKWLGNERIGVFVADAKRTRLTDFTMG---QSYS------VMIIGYERLRTVQEELS 458
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHR++ ++++ QA+ L +RV+LSGTPIQNDL E+F++V FVN G
Sbjct: 459 KGSGIDIVIADEGHRMRTVQNKSAQAIQTLNTSKRVILSGTPIQNDLTEFFAMVDFVNPG 518
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILGT + F KQ+E PI++ Q A + K R E+L + + ++RRT+ LLS YLP
Sbjct: 519 ILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKARSEELASLTSLFILRRTADLLSNYLP 578
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T Q +Y +++ S + + + +AL IT LKKLCN P L
Sbjct: 579 PKTEYVLFCNPTSSQANIYRHVLSSPVFQCALGNSD------SALQLITILKKLCNSPSL 632
Query: 460 VMDKIQTGADGFENAMNILPTGYAA--SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ K E++ + L + A+ S + +L S K+ VLD +L I+ TT +K+
Sbjct: 633 LNPKSSD-----EDSTSTLSSLVASLPSSITRRLTPASSGKIRVLDQLLHNIRHTTSEKV 687
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS--NEFIFMLSSKA 575
VL+SNYT TLDL +L ++RLDGS KR +V+ FN++S + F F+LS+KA
Sbjct: 688 VLISNYTSTLDLLGKLLTSLSLPFLRLDGSTPAAKRQALVDDFNRSSPTSVFAFLLSAKA 747
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YRFL G++EEK+ QRQ
Sbjct: 748 GGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRFLLKGALEEKIWQRQ 807
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D + V + FS ELR LF+L+E THD + C
Sbjct: 808 VTKIGLADSVMDQKSGVLQ-FSREELRDLFRLDEGATCQTHDLLGC 852
>gi|452845972|gb|EME47905.1| hypothetical protein DOTSEDRAFT_102471, partial [Dothistroma
septosporum NZE10]
Length = 834
Score = 447 bits (1151), Expect = e-123, Method: Compositional matrix adjust.
Identities = 260/617 (42%), Positives = 359/617 (58%), Gaps = 38/617 (6%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K P A NALV+ P K K V VVVDP+LS LR HQREGV F+YE
Sbjct: 153 KPRFSPNAENALVMRRPDSAP--------KGKQIVDVVVDPILSRELRKHQREGVAFLYE 204
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVK 218
CV G++ D G I+ADEMGLGKTLQ I L+WTLL+Q P K P++ KA++V P +L++
Sbjct: 205 CVMGMKDYDGEGAILADEMGLGKTLQTIALIWTLLKQTPFWKGQPIVSKALVVCPVTLIR 264
Query: 219 NWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
NW E KWLG I G S ++ L F Q NP+++I YE
Sbjct: 265 NWQKEFRKWLGDYRCGCFIPGDS----NSSLAPFTQKLSS---NPVMIIGYEKLTKIKDQ 317
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
L ++ L++CDEGHRLK +++ A+ + +RRV+LSGTPIQNDL E++ +V FVN
Sbjct: 318 LKNCKIDLIICDEGHRLKTAKNKAAAAIKEIGTQRRVILSGTPIQNDLEEFYQMVDFVNP 377
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
I+ F++++E PI+R + AS ++ K R E+L ++RRTS +LS+YL
Sbjct: 378 SIMSKYSTFKREFEIPIVRMRQPEASASDVEKGEARSEELANRTGMFILRRTSEILSQYL 437
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P KTE VV + T++Q ++Y ++ + A M NT + L I LKK+CN P
Sbjct: 438 PPKTEYVVLCRPTEVQADIYRTMVGTQAFIAAM----NTPTAVLEL--INVLKKVCNCPR 491
Query: 459 LVM--DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
L++ D + G E I P + SG KL VLD +L I TTD+K
Sbjct: 492 LLLTNDSKKEGVTKPELLEGISPRLLKSPGASG--------KLQVLDELLHQINSTTDEK 543
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFMLSSK 574
+VLVSNYT T+D+ L YKY+RLDG+ KR +V+ FN++ +N F+F+LS+K
Sbjct: 544 VVLVSNYTSTMDILANLLDSMSYKYLRLDGTTPQSKRQDLVDRFNRSPKTNSFVFLLSAK 603
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNL GA+RL+MFD DWNP+ D QAMARV RDGQ +PC +YR L+ G+++EK+ QR
Sbjct: 604 AGGVGLNLTGASRLIMFDLDWNPSTDLQAMARVHRDGQTRPCHIYRLLTQGALDEKIFQR 663
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
Q K L+ +VD + A F+ +ELR LF L+E TH + C+ G+ V+ P
Sbjct: 664 QVSKTGLADAIVDGKSG-ASGFTQAELRDLFTLDEGEDCQTHRLLGCNCGAKGLPVRAPD 722
Query: 695 --LESDCTDDLSCWHHV 709
+E +DLS V
Sbjct: 723 EVVEDTSRNDLSALAGV 739
>gi|115492543|ref|XP_001210899.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114197759|gb|EAU39459.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1329
Score = 447 bits (1149), Expect = e-122, Method: Compositional matrix adjust.
Identities = 268/633 (42%), Positives = 373/633 (58%), Gaps = 45/633 (7%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
IL+ FK P+ T + A V R HDPT P ALV+ P +
Sbjct: 219 ILSNAFKNPLRESTAAPIAPVACPVPR-------HDPTQPGALVMPRPSS--------VP 263
Query: 130 KDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCIT 189
K K V VVVDP+L+ LRPHQREGVKF+YECV G+R + G I+AD+MGLGKTLQ IT
Sbjct: 264 KGKQIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRDFNGEGAILADDMGLGKTLQTIT 323
Query: 190 LMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEID 246
L+WTLL+Q P+ + P++ KA+IV P +L+ NW E KWLG R+ D K
Sbjct: 324 LLWTLLKQNPVYESPPVVKKALIVCPVTLINNWRREFRKWLGNERIGVFVYDDKRK---- 379
Query: 247 NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQA 305
+L F T GR I+++ YE RS L K V +++ DEGHRLK ++++ QA
Sbjct: 380 -RLTDF--TMGR--AYNIMIVGYEKLRSVQENLAKGAGVDIIIADEGHRLKTLQNKSGQA 434
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
+ L A +RV+LSGTPIQNDL E+F+ V VN G+LGT + F +++E PI+R + A++
Sbjct: 435 IQSLNANKRVILSGTPIQNDLKEFFAAVDLVNPGVLGTFKSFIREFEGPIVRRRQPEATE 494
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
+ K R E+L + ++ ++RRT+ +L+ YLP KTE V+ T Q +Y N++ S
Sbjct: 495 KDIEKGEARNEELRELTSKFILRRTADILADYLPPKTEYVLFCDPTPTQANIYQNVLASP 554
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM---DKIQTGADGFENAMNILPTGY 482
+ + E +AL IT LKKLCN P L+ +K Q ++ + LP+
Sbjct: 555 VFQSVIGNAE------SALQLITILKKLCNSPSLLSPKNNKDQAPSETVAALLASLPSNL 608
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
+ SAK+ VLD +L + TT +KIVLVSNYT TL+L L ++
Sbjct: 609 LRHFSPSS-----SAKVRVLDQLLYKLHTTTSEKIVLVSNYTSTLNLLATLLTALSLPFL 663
Query: 543 RLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
RLDGS +KR +VE FN+ F F+LS+KAGG GLNLIGA+RLV+FD DWNPA D
Sbjct: 664 RLDGSTPAQKRQSLVEDFNRLPADRSFAFLLSAKAGGTGLNLIGASRLVLFDVDWNPATD 723
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ K L+ V++ ++ +A+ FS E
Sbjct: 724 IQAMARIHRDGQKRACRIYRILLKGSLEEKIWQRQVTKLGLADSVMEHKDGMAQ-FSRDE 782
Query: 661 LRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
LR LF+L++ + TH+ + C G++ P
Sbjct: 783 LRDLFRLDQESRCQTHELLGCDCGGRGVKSASP 815
>gi|212533393|ref|XP_002146853.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
gi|210072217|gb|EEA26306.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces marneffei
ATCC 18224]
Length = 1054
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 257/591 (43%), Positives = 348/591 (58%), Gaps = 32/591 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP AP ALV+ P K + V VVVDP LS LR HQREGVKF+YECV
Sbjct: 277 HDPNAPGALVMKRPKTAP--------KGQTIVDVVVDPFLSKHLREHQREGVKFLYECVM 328
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ ITL+WTLL+Q P+ A P+I KA+IV P +L+ NW
Sbjct: 329 GLRDYNGEGAILADEMGLGKTLQTITLLWTLLKQNPIYEASPVIKKALIVCPVTLINNWR 388
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D K KL F T G+ I+++ YE R+ +L
Sbjct: 389 KEFRKWLGNERIGVFVFDDKRK-----KLTDF--TMGK--AYNIMIVGYEKLRTVQDGLL 439
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +V+ DEGHRLK ++++ QA+ L +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 440 KGHGVDIVIADEGHRLKTVQNKSGQAIQALNTAKRIILSGTPIQNDLSEFFAAVDLVNPG 499
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILGT + F K++E PI+R Q A+ + K R E+L + + ++RRT+ +LSKYLP
Sbjct: 500 ILGTYRNFMKEFEGPIVRSQQPEATMRDIEKGEARGEELRELTSMFILRRTADVLSKYLP 559
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T +Q +Y +++ S + + E A S +T LKKLCN P L
Sbjct: 560 PKTEYVILCNPTSVQASIYRHVLGSPIFQSALGNTEG------AFSLLTVLKKLCNSPSL 613
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K G + M L + S + + S K+ VLD +L ++ TT +KIVL
Sbjct: 614 LTAK--AGDEPPNATMEALLSTLTPSLRR-QFSPSSSGKIRVLDQLLHNLQTTTSEKIVL 670
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS KR +V+ FN+ S F F+LS+KAGG
Sbjct: 671 VSNYTSTLNLLGILLTSLSLPFLRLDGSTPSAKRQSLVDDFNRAPASKCFAFLLSAKAGG 730
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNL GA+RLV+FD DWNPA D QAMAR+ RDGQK+ C++YR + G++EEK+ QRQ
Sbjct: 731 TGLNLTGASRLVLFDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGALEEKIWQRQVT 790
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
K L+ V++ + FS EL+ LF+L E TH+ + C GI
Sbjct: 791 KIGLADSVMESKSSNMAQFSREELKDLFRLYEGKSCQTHELLNCKCGGKGI 841
>gi|317026496|ref|XP_001389729.2| DNA-dependent ATPase [Aspergillus niger CBS 513.88]
Length = 993
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/598 (43%), Positives = 364/598 (60%), Gaps = 38/598 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP+ P ALV+ P + K K V VVVDP L+ LRPHQREGV+F+YECV
Sbjct: 247 HDPSQPGALVMRRPDS--------VPKGKQIVDVVVDPFLAKHLRPHQREGVRFLYECVM 298
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P++ KA+IV P +L+ NW
Sbjct: 299 GMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPVYDSPPVVKKALIVCPVTLINNWR 358
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D K +L F T GR ++++ YE RS +
Sbjct: 359 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TRGR--AYSVMIVGYEKLRSVQEGLA 409
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ N V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 410 NSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 469
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI++ + A+ + K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 470 VLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARNEELRELTSKFMLRRTADILAKYLP 529
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q +Y N++ S + + E +AL IT LKKLCN P L
Sbjct: 530 PKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE------SALQLITILKKLCNSPSL 583
Query: 460 VM--DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ D +T ++ ++ LP + SAKL VLD +L ++ T +KI
Sbjct: 584 LTPRDVNETPSETIAALLSSLPPNLLRHFTPSS-----SAKLRVLDQLLDGLRTKTSEKI 638
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VLVSNYT TL+L L ++RLDGS +KR +VE FN+ + F F+LS+KA
Sbjct: 639 VLVSNYTSTLNLLANLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKA 698
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 699 GGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQ 758
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
K L+ V++ ++ VA FS EL+ LF+L+E + TH+ + C NG Q+ PP
Sbjct: 759 VTKIGLADSVMEKKDSVA-QFSRDELKDLFRLDEESKCQTHELLDCDCGGNG-QIVPP 814
>gi|350638705|gb|EHA27061.1| hypothetical protein ASPNIDRAFT_119444 [Aspergillus niger ATCC
1015]
Length = 967
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/598 (43%), Positives = 364/598 (60%), Gaps = 38/598 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP+ P ALV+ P + K K V VVVDP L+ LRPHQREGV+F+YECV
Sbjct: 247 HDPSQPGALVMRRPDS--------VPKGKQIVDVVVDPFLAKHLRPHQREGVQFLYECVM 298
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P++ KA+IV P +L+ NW
Sbjct: 299 GMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPVHDSPPVVKKALIVCPVTLINNWR 358
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D K +L F T GR ++++ YE RS +
Sbjct: 359 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TRGR--AYSVMIVGYEKLRSVQEGLA 409
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ N V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 410 NSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 469
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI++ + A+ + K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 470 VLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARNEELRELTSKFMLRRTADILAKYLP 529
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q +Y N++ S + + E +AL IT LKKLCN P L
Sbjct: 530 PKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE------SALQLITILKKLCNSPSL 583
Query: 460 VM--DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ D +T ++ ++ LP + SAKL VLD +L ++ T +KI
Sbjct: 584 LTPRDVNETPSETIAALLSSLPPNLLRHFTPSS-----SAKLRVLDQLLDGLRTKTSEKI 638
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VLVSNYT TL+L L ++RLDGS +KR +VE FN+ + F F+LS+KA
Sbjct: 639 VLVSNYTSTLNLLANLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKA 698
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 699 GGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQ 758
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
K L+ V++ ++ VA FS EL+ LF+L+E + TH+ + C NG Q+ PP
Sbjct: 759 VTKIGLADSVMEKKDSVA-QFSRGELKDLFRLDEESKCQTHELLGCDCGGNG-QIVPP 814
>gi|154316345|ref|XP_001557494.1| hypothetical protein BC1G_03758 [Botryotinia fuckeliana B05.10]
Length = 917
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/616 (42%), Positives = 364/616 (59%), Gaps = 41/616 (6%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP-PQLSAHDLLKIDKDKI 133
FK P+L +T + + G HDP+ P A+V+ P P+ A K K
Sbjct: 201 FKNPLL-------ATTVMPQNKSGTPTPRHDPSVPGAIVMQRPNPKYVA-------KGKQ 246
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
V VVVDP L LR HQ+EGVKF+YECV G R + G I+ADEMGLGKTLQ I L+WT
Sbjct: 247 VVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNGQGAILADEMGLGKTLQTIALLWT 306
Query: 194 LLRQGPLAKP----LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKL 249
LL+Q P P +I KA+IV P +L+ NW E KWLG + + GSK + +L
Sbjct: 307 LLKQNP-EHPHEGGVIKKALIVCPVTLISNWKAEFNKWLGNERIGVFVADGSK---NIRL 362
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMG 308
F T+G+ +++I YE R+ L K + +V+ DEGHRLK +++ QA+
Sbjct: 363 TDF--THGKS--YSVMIIGYEKLRTVQEELKKGSGIDIVVADEGHRLKTAANKSAQAIKN 418
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L +RRV+LSGTPIQNDL E+F++V FVN G+L F+K +E PIL+ + A++++
Sbjct: 419 LNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATESDM 478
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
K R E+L + ++RR +++L+KYL KTE V+ K T Q E+Y +++ S
Sbjct: 479 EKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVFG 538
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
R + E +L IT LKK+CN P L++ K T N +L + K
Sbjct: 539 RVLGSSE------ASLQLITMLKKVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKK 592
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF-ERLSKLRGYKYVRLDGS 547
++ S+K VL+ ML + +T +KIV+VSNYT TLDL LS L ++RLDGS
Sbjct: 593 NPVVA--SSKFRVLNRMLMRLSKSTTEKIVIVSNYTSTLDLLVSHLSSL-NLPFLRLDGS 649
Query: 548 MTIKKRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
KR +V TFNKT S F F+LS+K+GG G+NLIGA+RLV+FD DWNPA D QAMA
Sbjct: 650 TPQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGINLIGASRLVLFDVDWNPATDLQAMA 709
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R+ RDGQK+P +YRFL +G ++EK+ QRQ K L+ V+D +++ A FS ELR LF
Sbjct: 710 RIHRDGQKRPVKIYRFLMSGGMDEKIYQRQVTKMGLADSVMDGKKNEA-SFSADELRDLF 768
Query: 666 QLEENTISDTHDKIKC 681
+L+ N TH+ + C
Sbjct: 769 RLDVNAQCQTHELLGC 784
>gi|134055853|emb|CAK96198.1| unnamed protein product [Aspergillus niger]
Length = 1007
Score = 445 bits (1145), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/598 (43%), Positives = 364/598 (60%), Gaps = 38/598 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP+ P ALV+ P + K K V VVVDP L+ LRPHQREGV+F+YECV
Sbjct: 261 HDPSQPGALVMRRPDS--------VPKGKQIVDVVVDPFLAKHLRPHQREGVRFLYECVM 312
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P++ KA+IV P +L+ NW
Sbjct: 313 GMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPVYDSPPVVKKALIVCPVTLINNWR 372
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D K +L F T GR ++++ YE RS +
Sbjct: 373 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TRGR--AYSVMIVGYEKLRSVQEGLA 423
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ N V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 424 NSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 483
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI++ + A+ + K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 484 VLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARNEELRELTSKFMLRRTADILAKYLP 543
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q +Y N++ S + + E +AL IT LKKLCN P L
Sbjct: 544 PKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE------SALQLITILKKLCNSPSL 597
Query: 460 VM--DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ D +T ++ ++ LP + SAKL VLD +L ++ T +KI
Sbjct: 598 LTPRDVNETPSETIAALLSSLPPNLLRHFTPSS-----SAKLRVLDQLLDGLRTKTSEKI 652
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VLVSNYT TL+L L ++RLDGS +KR +VE FN+ + F F+LS+KA
Sbjct: 653 VLVSNYTSTLNLLANLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKA 712
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 713 GGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQ 772
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
K L+ V++ ++ VA FS EL+ LF+L+E + TH+ + C NG Q+ PP
Sbjct: 773 VTKIGLADSVMEKKDSVA-QFSRDELKDLFRLDEESKCQTHELLDCDCGGNG-QIVPP 828
>gi|347828015|emb|CCD43712.1| hypothetical protein [Botryotinia fuckeliana]
Length = 962
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 262/616 (42%), Positives = 364/616 (59%), Gaps = 41/616 (6%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP-PQLSAHDLLKIDKDKI 133
FK P+L +T + + G HDP+ P A+V+ P P+ A K K
Sbjct: 246 FKNPLL-------ATTVMPQNKSGTPTPRHDPSVPGAIVMQRPNPKYVA-------KGKQ 291
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
V VVVDP L LR HQ+EGVKF+YECV G R + G I+ADEMGLGKTLQ I L+WT
Sbjct: 292 VVDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNGQGAILADEMGLGKTLQTIALLWT 351
Query: 194 LLRQGPLAKP----LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKL 249
LL+Q P P +I KA+IV P +L+ NW E KWLG + + GSK + +L
Sbjct: 352 LLKQNP-EHPHEGGVIKKALIVCPVTLISNWKAEFNKWLGNERIGVFVADGSK---NIRL 407
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMG 308
F T+G+ +++I YE R+ L K + +V+ DEGHRLK +++ QA+
Sbjct: 408 TDF--THGKS--YSVMIIGYEKLRTVQEELKKGSGIDIVVADEGHRLKTAANKSAQAIKN 463
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L +RRV+LSGTPIQNDL E+F++V FVN G+L F+K +E PIL+ + A++++
Sbjct: 464 LNTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATESDM 523
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
K R E+L + ++RR +++L+KYL KTE V+ K T Q E+Y +++ S
Sbjct: 524 EKGTAREEELAELTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVFG 583
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
R + E +L IT LKK+CN P L++ K T N +L + K
Sbjct: 584 RVLGSSE------ASLQLITMLKKVCNAPSLLVKKSDTDTPSNSNVAQLLESIPPEILKK 637
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF-ERLSKLRGYKYVRLDGS 547
++ S+K VL+ ML + +T +KIV+VSNYT TLDL LS L ++RLDGS
Sbjct: 638 NPVVA--SSKFRVLNRMLMRLSKSTTEKIVIVSNYTSTLDLLVSHLSSL-NLPFLRLDGS 694
Query: 548 MTIKKRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
KR +V TFNKT S F F+LS+K+GG G+NLIGA+RLV+FD DWNPA D QAMA
Sbjct: 695 TPQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGINLIGASRLVLFDVDWNPATDLQAMA 754
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R+ RDGQK+P +YRFL +G ++EK+ QRQ K L+ V+D +++ A FS ELR LF
Sbjct: 755 RIHRDGQKRPVKIYRFLMSGGMDEKIYQRQVTKMGLADSVMDGKKNEA-SFSADELRDLF 813
Query: 666 QLEENTISDTHDKIKC 681
+L+ N TH+ + C
Sbjct: 814 RLDVNAQCQTHELLGC 829
>gi|326473366|gb|EGD97375.1| dsDNA-dependent ATPase [Trichophyton tonsurans CBS 112818]
Length = 922
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 254/588 (43%), Positives = 358/588 (60%), Gaps = 39/588 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P A+V+ P + A K V VVVDP+L LR HQREGVKF+YECV
Sbjct: 217 HDPTLPGAVVMKRPSSVPA--------GKQIVDVVVDPILGKHLREHQREGVKFLYECVM 268
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P+I KA+IV P +L+ NW
Sbjct: 269 GLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWK 328
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG N+L+ F T GR +++I YE RS L
Sbjct: 329 KEFKKWLGSDRIGVFVADGKG-----NRLSDF--TMGRS--YSVMIIGYERLRSVQDQLT 379
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQN+L E+F++V FVN
Sbjct: 380 KGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSEFFAMVDFVNPA 439
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 440 LLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLP 499
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q+ +Y +++ S + ++ E +AL IT LKK+CN P L
Sbjct: 500 PKTEYILFCNPTSAQRNVYHHVLASPLFQSVLRNSE------SALQLITILKKVCNSPSL 553
Query: 460 VMDKIQTGADGFENAMNI----LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
+ K++ G +++M+ LP +G S K+ VLD +L ++ T +
Sbjct: 554 LKPKVEDNGKGEDSSMSAFISSLPPNIHRCLAAGS-----SGKIRVLDQLLYNLQSKTTE 608
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSS 573
K+VLVSNYT TL+L L ++RLDGS KR +VE FN+ +S+ F F+LS+
Sbjct: 609 KVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSA 668
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ Q
Sbjct: 669 KAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQ 728
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
RQ K L+ V+D + +A HFS EL+ LF+L+E++ TH+ + C
Sbjct: 729 RQVTKLGLADSVMDQKGGIA-HFSQEELKDLFRLDESSKCQTHELLGC 775
>gi|225560239|gb|EEH08521.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 974
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/593 (42%), Positives = 354/593 (59%), Gaps = 37/593 (6%)
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
+G+ HDPTAP A+++ P + K K V VV+DP+L+ LR HQREGVK
Sbjct: 274 DGSPIPRHDPTAPGAVIMKRPKS--------VPKGKQIVDVVLDPLLAKHLREHQREGVK 325
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPS 214
F+YECV G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A+P++ KA+IV P
Sbjct: 326 FLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKKALIVCPV 385
Query: 215 SLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
+L+ NW E KWLG RV D +L F T G+ +++I YE R
Sbjct: 386 TLIDNWKKEFRKWLGNERVGVFVADAKR-----TRLTDF--TMGKS--YSVMIIGYERLR 436
Query: 274 SHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
+ L K + +V+ DEGHR++ ++++ QA+ L +R++LSGTPIQNDL E+F++
Sbjct: 437 TVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPIQNDLTEFFAM 496
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
V FVN G+LGT + F K++E PI++ + A + + K R E+L + + ++RRT+
Sbjct: 497 VDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELTNLTSLFILRRTAD 556
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+L KYLP KTE V+ T QK +Y ++ S + + E +AL IT LKK
Sbjct: 557 ILLKYLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCALGNSE------SALQLITILKK 610
Query: 453 LCNHPDLV--MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIK 510
LCN P L+ + QT ++ LP S K+ VLD +L I+
Sbjct: 611 LCNSPSLLKPRNSDQTPNSTLGALISSLPPTVLRHLSPAS-----SGKIRVLDQLLHNIR 665
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FI 568
TT +K+VL+SNYT TLDL ++RLDGS KR +V+ FN++S+ F
Sbjct: 666 HTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDDFNRSSSSSVFA 725
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LS+KAGG GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+ C VYR + G++E
Sbjct: 726 FLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRVYRLVLKGALE 785
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
EK+ QRQ K L+ V+D + V+ FS ELR LF+L+E T TH+ I C
Sbjct: 786 EKIWQRQVTKIGLADSVMDQKTGVS-QFSREELRDLFRLDEGTTCQTHELIGC 837
>gi|240278991|gb|EER42497.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H143]
gi|325090250|gb|EGC43560.1| dsDNA-dependent ATPase [Ajellomyces capsulatus H88]
Length = 974
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/593 (42%), Positives = 354/593 (59%), Gaps = 37/593 (6%)
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
+G+ HDPTAP A+++ P + K K V VV+DP+L+ LR HQREGVK
Sbjct: 274 DGSPIPRHDPTAPGAVIMKRP--------TSVPKGKQIVDVVLDPLLAKHLREHQREGVK 325
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPS 214
F+YECV G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A+P++ KA+IV P
Sbjct: 326 FLYECVMGMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKKALIVCPV 385
Query: 215 SLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
+L+ NW E KWLG RV D +L F T G+ +++I YE R
Sbjct: 386 TLIDNWRKEFRKWLGNERVGVFVADAKR-----TRLTDF--TMGKS--YSVMIIGYERLR 436
Query: 274 SHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
+ L K + +V+ DEGHR++ ++++ QA+ L +R++LSGTPIQNDL E+F++
Sbjct: 437 TVQEELSKGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPIQNDLTEFFAM 496
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
V FVN G+LGT + F K++E PI++ + A + + K R E+L + + ++RRT+
Sbjct: 497 VDFVNPGLLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELTNLTSLFILRRTAD 556
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+L KYLP KTE V+ T QK +Y ++ S + + E +AL IT LKK
Sbjct: 557 ILLKYLPPKTEYVLFCNPTSSQKNIYHYVLSSPIFQCALGNSE------SALQLITILKK 610
Query: 453 LCNHPDLV--MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIK 510
LCN P L+ + QT ++ LP S K+ VLD +L I+
Sbjct: 611 LCNSPSLLKPRNSDQTPNSTLGALISSLPPTVLRHLSPAS-----SGKIRVLDQLLHNIR 665
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FI 568
TT +K+VL+SNYT TLDL ++RLDGS KR +V+ FN++S+ F
Sbjct: 666 HTTSEKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDDFNRSSSSSVFA 725
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LS+KAGG GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+ C VYR + G++E
Sbjct: 726 FLLSAKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRVYRLVLKGALE 785
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
EK+ QRQ K L+ V+D + V+ FS ELR LF+L+E T TH+ I C
Sbjct: 786 EKIWQRQVTKIGLADSVMDQKTGVS-QFSREELRDLFRLDEGTTCQTHELIGC 837
>gi|303317828|ref|XP_003068916.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240108597|gb|EER26771.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 961
Score = 444 bits (1141), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/617 (42%), Positives = 363/617 (58%), Gaps = 38/617 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P A+V+ P + KDK V VVVDP+L LR HQREGVKF+YECV
Sbjct: 272 HDPNQPGAIVMKRPES--------VPKDKQIVDVVVDPLLGKHLREHQREGVKFLYECVM 323
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTL++Q P+ A P++ KA+IV P +L+KNW
Sbjct: 324 GMRPFNGEGAILADEMGLGKTLQTIALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQ 383
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG D + +Y +++I YE R+ L
Sbjct: 384 KEFRKWLGNDRLGVFVADGKHMRLTDFTMG---MSYN------VMIIGYERLRTVQEELA 434
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 435 KGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDLSEFFAMVDFVNPG 494
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + AS + K R E+L G+ ++ ++RRT+ +LSK+LP
Sbjct: 495 LLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFILRRTADILSKHLP 554
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q +Y ++I S + + E +AL IT LKKLCN P L
Sbjct: 555 PKTEYILFCNPTPAQANIYRHVIASPIFQSALGNSE------SALQLITILKKLCNSPSL 608
Query: 460 VMDKIQTGAD---GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
+ K+ + + ++ LP + S K+ VLD +L + TT +K
Sbjct: 609 LTLKVLKDENPNCTISSLISTLPPNLLRHFSPAS-----SGKIRVLDQLLHNLHSTTSEK 663
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSK 574
IVLVSNYT TL+L L Y+RLDGS KR +V+ FN++S++ F F+LS+K
Sbjct: 664 IVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLLSAK 723
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNL GA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G +EEK+ QR
Sbjct: 724 AGGIGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQR 783
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
Q K L+ V+D + VA HFS ELR LF+L+E+ THD + C G V
Sbjct: 784 QVTKLGLADSVMDQKNSVA-HFSREELRDLFRLDEDAECQTHDLLGCECEGRGRDVSIIA 842
Query: 695 LESDCTDDLSCWHHVTE 711
D D+LS +TE
Sbjct: 843 DVGDNGDNLSDSESLTE 859
>gi|328711442|ref|XP_001943462.2| PREDICTED: DNA repair and recombination protein RAD54B-like
[Acyrthosiphon pisum]
Length = 842
Score = 443 bits (1140), Expect = e-121, Method: Compositional matrix adjust.
Identities = 237/587 (40%), Positives = 352/587 (59%), Gaps = 25/587 (4%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K L D ++P AL++ P + K++I VV++P L+ LRPHQ+ G+ F+YE
Sbjct: 210 KILVDVSSPEALIM-PEPDIDHQSFFNKKKEEI-TSVVLEPFLAKHLRPHQKTGIIFLYE 267
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVAPSSLVKN 219
CV+G + ++ +G I+ADEMGLGKTLQ I L+W LL++GP PL + +IVAPSSLV N
Sbjct: 268 CVSGFKAQECFGAILADEMGLGKTLQTICLVWMLLKRGPYGGIPLAKRVLIVAPSSLVGN 327
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN--PILVISYETFRSHA 276
W NE T+WLG R+ +D K + R P P+++ SYE +
Sbjct: 328 WENEFTRWLGRDRLRLFSVDQKKKP----------SEFARLPARSYPVMITSYEMLVRYI 377
Query: 277 SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
+ K L++CDEGHRLKN + TY AL ++ KRRVLL+GTPIQN+L E+++L+ FV
Sbjct: 378 EEIEKLHFDLMVCDEGHRLKNNSTNTYLALTKIECKRRVLLTGTPIQNELAEFYALIDFV 437
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N GILGT F++++E I+ Q + + +L + + ++RRT + +K
Sbjct: 438 NPGILGTYSMFKREFEDKIVESQQPECHPQIISLGKRKASELNEVTEKFILRRTQDVNNK 497
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
YLP K E VV M +Q LY + S R + G +T ++ S IT LKK+CNH
Sbjct: 498 YLPSKYESVVFCAMAPIQCRLYEETV-SYWENRVQEFGLST---ISHFSVITMLKKVCNH 553
Query: 457 PDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
P+L+++ + +D E +N + LIE S KL+V+D +L + +K
Sbjct: 554 PELILNN-RNNSDTTEETLN---QHLNRTITLKHSLIESSGKLIVVDNLLKELHKNGSEK 609
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKA 575
VL+S YTQTLD+F +L ++ YKY+RLDGS +R +V+ FN + SN + +LS+KA
Sbjct: 610 TVLISYYTQTLDIFVKLCDMKHYKYLRLDGSTATAQRTDIVKKFNNSNSNYSVLLLSAKA 669
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNL+GA+ L+++D DWNPA+D QAMAR+WRDGQKK +YR L++G+IEEK+ QRQ
Sbjct: 670 GGVGLNLVGASNLILYDSDWNPASDQQAMARIWRDGQKKNVHIYRLLTSGTIEEKIFQRQ 729
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
K LS + + + S +L+ LF +++ + THD ++C+
Sbjct: 730 ISKTGLSEAITNPDNQNNTKLSFEQLKDLFNFKKDALCSTHDLLECN 776
>gi|358370139|dbj|GAA86751.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus kawachii IFO 4308]
Length = 988
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 258/598 (43%), Positives = 360/598 (60%), Gaps = 38/598 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP+ P ALV+ P + K K V VVVDP L+ LRPHQREGV+F+YECV
Sbjct: 247 HDPSQPGALVMKRPDS--------VPKGKQIVDVVVDPFLAKHLRPHQREGVQFLYECVM 298
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P++ KA+IV P +L+ NW
Sbjct: 299 GMRPFNGEGAILADDMGLGKTLQTITLLWTLLKQNPVHDSPPVVKKALIVCPVTLINNWR 358
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D K +L F T GR ++++ YE RS +
Sbjct: 359 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TRGR--AYSVMIVGYEKLRSVQEGLA 409
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ N V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 410 NSNGVDIIVADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 469
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI++ + A+ + K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 470 VLGTFKSFVREFEGPIVKSRQPEATRKDIEKGEARNEELRELTSKFMLRRTADILAKYLP 529
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q +Y N++ S + + E +AL IT LKKLCN P L
Sbjct: 530 PKTEYVLFCKATRTQATIYQNVLASPVFQSALGNSE------SALQLITILKKLCNSPSL 583
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGK--LLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ T D E + ++ + SAKL VLD +L ++ T +KI
Sbjct: 584 L-----TPRDVNEKPSETIAALLSSLPPNLLRHFTPSSSAKLRVLDQLLDGLRTKTSEKI 638
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VLVSNYT TL+L L ++RLDGS +KR +VE FN+ + F F+LS+KA
Sbjct: 639 VLVSNYTSTLNLLANLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRLPSNLCFAFLLSAKA 698
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 699 GGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQ 758
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
K L+ V++ + VA FS EL+ LF+L+E + TH+ + C NG Q+ PP
Sbjct: 759 VTKIGLADSVMEKRDSVA-QFSRDELKDLFRLDEESKCQTHELLGCDCGGNG-QLVPP 814
>gi|307177261|gb|EFN66439.1| DNA repair and recombination protein RAD54B [Camponotus floridanus]
Length = 845
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 239/550 (43%), Positives = 344/550 (62%), Gaps = 27/550 (4%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V VD L+ LR HQR G+ F+YEC+ G+++ D +G I+ADEMGLGKTLQCITL+WT+L+
Sbjct: 253 VSVDFCLTAKLREHQRYGIVFLYECLMGLKVPDYFGAILADEMGLGKTLQCITLIWTMLK 312
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
+GP KP++ + +I+ P SL NW E KWLG R++ +DG ++ +
Sbjct: 313 KGPYGKPIVRRVLIITPRSLCNNWDKEFRKWLGCHRISPYVVDGKNRP----------KD 362
Query: 256 YGRRPVNPILVISYETF-RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
+ + P N +L+ISYE +SH + + L++CDEGHRLKN + + L + K+R
Sbjct: 363 FIKHPRNSVLIISYEMLVKSHVEI-KEITFDLLVCDEGHRLKNSNIKAAKLLHEINCKKR 421
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++L+GTPIQNDL E+++LV FVN GILG+ E++ YE PI+ Q A + +ER
Sbjct: 422 IMLTGTPIQNDLKEFYTLVDFVNPGILGSPLEYKNYYEDPIVASQCPNADKNVLSLGSER 481
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+L ++RRT ++KYLP K E V+ +T Q +LY+ L+ +T
Sbjct: 482 ATELHERTKSFILRRTQNTINKYLPCKYEIVLFCSLTSEQMDLYS-LVTDAWFNKTCLQD 540
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVM-DKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
+N T LS I +LKK+CNHP+L + DK T + A+ + K K I
Sbjct: 541 KN----HTHLSIIIALKKICNHPNLFINDKENTLRETLSKAICTI------QLKQDKNFI 590
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ K+ +L ++ +K TD+K+VLVS YTQTLDLFE + + K++RLDG+++ R
Sbjct: 591 KYCGKITILQVLMRNLK-KTDEKLVLVSYYTQTLDLFETICNIEELKFLRLDGTISSSTR 649
Query: 554 AKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
+K++E FN ++ N I +LS+KAGG GLNL GA+RLV+FD DWNPA+D QAMAR+WRDGQ
Sbjct: 650 SKIIEQFNTRSDNSKILLLSAKAGGVGLNLPGASRLVLFDSDWNPASDVQAMARIWRDGQ 709
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KK ++YR L+TG+IEEK+ QRQ K +LS VVD + S +EL+ LF L +TI
Sbjct: 710 KKNVYIYRLLTTGTIEEKIYQRQISKASLSESVVDLNHLGSLKLSTAELKDLFTLATDTI 769
Query: 673 SDTHDKIKCS 682
S THD + CS
Sbjct: 770 SLTHDLLNCS 779
>gi|326481938|gb|EGE05948.1| dsDNA-dependent ATPase [Trichophyton equinum CBS 127.97]
Length = 1004
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 253/588 (43%), Positives = 358/588 (60%), Gaps = 39/588 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P A+V+ P + A K V VVVDP+L LR HQREGVKF+YECV
Sbjct: 217 HDPTLPGAVVMKRPSSVPA--------GKQIVDVVVDPILGKHLREHQREGVKFLYECVM 268
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P+I KA+IV P +L+ NW
Sbjct: 269 GLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWK 328
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ +G N+L+ F T GR +++I YE RS L
Sbjct: 329 KEFKKWLGSDRIGVFVAEGKG-----NRLSDF--TMGRS--YSVMIIGYERLRSVQDQLT 379
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQN+L E+F++V FVN
Sbjct: 380 KGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSEFFAMVDFVNPA 439
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 440 LLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLP 499
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q+ +Y +++ S + ++ E+T L IT LKK+CN P L
Sbjct: 500 PKTEYILFCNPTSAQRNVYHHVLASPLFQSVLRNSEST------LQLITILKKVCNSPSL 553
Query: 460 VMDKIQTGADGFENAMNI----LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
+ K++ G +++M+ LP +G S K+ VLD +L ++ T +
Sbjct: 554 LKPKVEDNGKGEDSSMSAFISSLPPNIHRCLAAGS-----SGKIRVLDQLLYNLQSKTTE 608
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSS 573
K+VLVSNYT TL+L L ++RLDGS KR +VE FN+ +S+ F F+LS+
Sbjct: 609 KVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSA 668
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ Q
Sbjct: 669 KAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQ 728
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
RQ K L+ V+D + +A HFS EL+ LF+L+E++ TH+ + C
Sbjct: 729 RQVTKLGLADSVMDQKGGIA-HFSQEELKDLFRLDESSKCQTHELLGC 775
>gi|67517153|ref|XP_658459.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4]
gi|40746529|gb|EAA65685.1| hypothetical protein AN0855.2 [Aspergillus nidulans FGSC A4]
gi|259488860|tpe|CBF88651.1| TPA: DNA-dependent ATPase (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1011
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 280/682 (41%), Positives = 390/682 (57%), Gaps = 56/682 (8%)
Query: 49 PNSKLPMTKEEMSEHENLI-RQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPT 107
P+ L T+ + S+ NL R ++ +K P+L T A + R HDP
Sbjct: 211 PSPGLAETRVKESQAANLASRGSISGAYKRPLLEST----VMPAASLDEPTPR---HDPK 263
Query: 108 APNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRI 167
P AL++ P K K V VVVDP+L+ LRPHQREGVKF+YECV G+R
Sbjct: 264 QPGALIMKRPGSAP--------KGKRIVDVVVDPILAKHLRPHQREGVKFLYECVMGMRS 315
Query: 168 EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWCNEIT 225
+ G I+AD+MGLGKTLQ ITL+WTLL+Q P+ A P+I KA+IV P +L+ NW E
Sbjct: 316 FNGEGAILADDMGLGKTLQTITLLWTLLKQNPIYEAAPVIKKALIVCPVTLINNWRREFR 375
Query: 226 KWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVLHKNE 283
KWLG R+ D K +L F T G+ I+++ YE RS + N
Sbjct: 376 KWLGNERIGVFVFDDKRK-----RLTDF--TMGK--AYSIMIVGYEKLRSVQEGLARGNG 426
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
V +V+ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G+LG+
Sbjct: 427 VDIVIADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPGVLGS 486
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
+ F K++E PI+R + A++ + K R E+L + ++ ++RRT+ +L+ YLP KTE
Sbjct: 487 FKSFIKEFEGPIVRSRQPEATEKDIEKGEARNEELRELTSQFMLRRTADILADYLPPKTE 546
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM-- 461
V+ K T+ Q ++Y N++ S + + E +AL IT LKKLCN P L+
Sbjct: 547 YVLFCKPTNTQAKIYQNVLASPVFQGALGNSE------SALQLITILKKLCNSPSLLSLK 600
Query: 462 DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
D + ++ ++ LP + SAK+ VLD +L ++ +T +K+VLVS
Sbjct: 601 DANEKPSETIAAILSSLPPNLLRHFSP-----SCSAKIRVLDQLLHYLRTSTSEKVVLVS 655
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGGCG 579
NYT TLDL L ++RLDGS +KR +VE FN+ S F F+LS+KAGG G
Sbjct: 656 NYTSTLDLLANLLSSLSLPFLRLDGSTPAQKRQSLVEDFNRHPASTCFAFLLSAKAGGTG 715
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
LNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK C +YR L GS+EEK+ QRQ K
Sbjct: 716 LNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKHHCHIYRILLQGSLEEKIWQRQVTKI 775
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI----------Q 689
L+ V++ ++ VA FS ELR LF+L+ + THD + C G Q
Sbjct: 776 GLADSVMEHKDSVA-QFSRDELRDLFRLDVVSKCQTHDLLACGCGGKGYSTASGNDHTPQ 834
Query: 690 VKPPPL-ESDCTDDLSCWHHVT 710
+P L E D D+SC T
Sbjct: 835 QEPEGLSEDDDESDISCLKFPT 856
>gi|154276746|ref|XP_001539218.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414291|gb|EDN09656.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 959
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/589 (42%), Positives = 356/589 (60%), Gaps = 43/589 (7%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPTAP A+++ P + K K V VV+DP+L+ LR HQREGVKF+YECV
Sbjct: 266 HDPTAPGAVIMKRP--------TSVPKGKQIVDVVLDPLLAKHLREHQREGVKFLYECVM 317
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A+P++ KA+IV P +L+ NW
Sbjct: 318 GMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWR 377
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG RV D +L F T G+ +++I YE R+ L
Sbjct: 378 KEFRKWLGNERVGVFVADTKR-----TRLTDF--TMGKS--YSVMIIGYERLRTVQEELS 428
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHR++ ++++ QA+ L +R++LSGTPIQNDL E+F++V FVN G
Sbjct: 429 KGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSKRIVLSGTPIQNDLTEFFAMVDFVNPG 488
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + A + + K R E+L + + ++RRT+ +L KYLP
Sbjct: 489 LLGTFKMFMKEFEGPIVKSRQPGALEKDIEKGEARSEELSNLTSLFILRRTADILLKYLP 548
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T QK +Y +++ S + + E +AL IT LKKLCN P L
Sbjct: 549 PKTEYVLLCNPTSSQKNIYHHVLSSPIFQCALGNSE------SALQLITILKKLCNSPSL 602
Query: 460 V--MDKIQTGADGFENAMNILPTG---YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
+ + QT ++ LP Y + SG K+ VLD +L I+ TT
Sbjct: 603 LKPRNSDQTPNSTLGALISSLPPTVLRYLSPASSG--------KIRVLDQLLHNIRHTTS 654
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLS 572
+K+VL+SNYT TLDL ++RLDGS KR +V+ FN++S+ F F+LS
Sbjct: 655 EKVVLISNYTSTLDLLATFLTSLSLPFLRLDGSTPPSKRQGLVDDFNRSSSSSVFAFLLS 714
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
+KAGG GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+ C VYR + G++EEK+
Sbjct: 715 AKAGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRVYRLVLKGALEEKIW 774
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
QRQ K L+ V+D + V++ FS EL+ LF+L+E T TH+ I C
Sbjct: 775 QRQVTKIGLADSVMDQKTGVSQ-FSREELKDLFRLDEGTTCQTHELIGC 822
>gi|340720108|ref|XP_003398485.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54B-like [Bombus terrestris]
Length = 824
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 232/560 (41%), Positives = 339/560 (60%), Gaps = 33/560 (5%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
D + + V VD L N+LRPHQR G+ F+YEC+ G++I + +G I+ADEMGLGKTLQCI
Sbjct: 213 DMSENETEVFVDTCLVNVLRPHQRHGIVFLYECIMGLKISNYFGAILADEMGLGKTLQCI 272
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDN 247
T++WTLL++GP P++ +IV PS L +W E WLG R++ +D +K
Sbjct: 273 TIIWTLLKKGPYGYPILKYILIVTPSCLCNSWNKEFKHWLGFHRISPYVVDAKNKT---- 328
Query: 248 KLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
+ + + N +++ISY+ + + L++CDEGHRLKN + + + L
Sbjct: 329 ------KDFKKHIRNSVMIISYDMLTRCEQEVEEIPFNLIICDEGHRLKNNDIKAAKILH 382
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
LK KRR++L+GTPIQN+L E+F+L+ FVN ILG+ EF+ YE PI+ Q A D
Sbjct: 383 NLKCKRRIILTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHV 442
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
+ ER +L ++RRT ++KYLP K E +V +++ Q++LY+ + +D+
Sbjct: 443 VSLGTERANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQDLYSQV--TDSW 500
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGADGFENAMNILPTGYA 483
N ++ L+ IT+LKK+CNHP+L ++ + G NI +
Sbjct: 501 FNKNPSNNN----ISHLTVITALKKICNHPELFYNEKTELFCIDSKGIHKTSNIKDSTKT 556
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
Y K+ ++ T+L K T++K+VLVS YTQTLD+ E + G +++R
Sbjct: 557 VYY----------GKISIVQTLLRNXK-KTEEKLVLVSYYTQTLDILETVCNREGLQFLR 605
Query: 544 LDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
LDGS T R+K++E FN T+ N +F+LS+KAGG GLNL GA+RL++FD DWNPA+D Q
Sbjct: 606 LDGSTTSNTRSKIIERFNSTNDNSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQ 665
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
AMAR+WRDGQKK ++ R L+TG+IEEK+ QRQ K +L+ VVD + SMSEL+
Sbjct: 666 AMARIWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVVDLNPSSSFKLSMSELK 725
Query: 663 SLFQLEENTISDTHDKIKCS 682
LF L NT THD +KCS
Sbjct: 726 DLFTLAANTNCLTHDLMKCS 745
>gi|320038964|gb|EFW20899.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 961
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 264/617 (42%), Positives = 362/617 (58%), Gaps = 38/617 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HD P A+V+ P + KDK V VVVDP+L LR HQREGVKF+YECV
Sbjct: 272 HDQNQPGAIVMKRPES--------VPKDKQIVDVVVDPLLGKHLREHQREGVKFLYECVM 323
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTL++Q P+ A P++ KA+IV P +L+KNW
Sbjct: 324 GMRPFNGEGAILADEMGLGKTLQTIALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQ 383
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG D + +Y +++I YE R+ L
Sbjct: 384 KEFRKWLGNDRLGVFVADGKHMRLTDFTMG---MSYN------VMIIGYERLRTVQEELA 434
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 435 KGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDLSEFFAMVDFVNPG 494
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + AS + K R E+L G+ ++ ++RRT+ +LSK+LP
Sbjct: 495 LLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFILRRTADILSKHLP 554
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q +Y ++I S + + E +AL IT LKKLCN P L
Sbjct: 555 PKTEYILFCNPTPAQANIYRHVIASPIFQSALGNSE------SALQLITILKKLCNSPSL 608
Query: 460 VMDKIQTGAD---GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
+ K+ + + ++ LP + S K+ VLD +L + TT +K
Sbjct: 609 LTLKVLKDENPNCTISSLISTLPPNLLRHFSPAS-----SGKIRVLDQLLHNLHSTTSEK 663
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSK 574
IVLVSNYT TL+L L Y+RLDGS KR +V+ FN++S++ F F+LS+K
Sbjct: 664 IVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLLSAK 723
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNL GA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G +EEK+ QR
Sbjct: 724 AGGIGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQR 783
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
Q K LS V+D + VA HFS ELR LF+L+E+ THD + C G V
Sbjct: 784 QVTKLGLSDSVMDQKNSVA-HFSREELRDLFRLDEDAECQTHDLLGCECEGRGRDVSIIA 842
Query: 695 LESDCTDDLSCWHHVTE 711
D D+LS +TE
Sbjct: 843 DVGDNGDNLSDSESLTE 859
>gi|295671388|ref|XP_002796241.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284374|gb|EEH39940.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 999
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 256/586 (43%), Positives = 355/586 (60%), Gaps = 37/586 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
H+PT P A+V+ P + K K V VV+DP+L LR HQREGV+F+YECV
Sbjct: 295 HNPTLPGAVVMRRPES--------VPKGKEIVDVVLDPLLGKHLREHQREGVRFLYECVM 346
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A P+I KA+IV P +L+ NW
Sbjct: 347 GMRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAPPVIKKALIVCPVTLIDNWK 406
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D D + Q+Y +++I YE R+ L
Sbjct: 407 KEFRKWLGNERIGVFVADAKRTRLTDFTMG---QSYS------VMIIGYERLRTVQEELS 457
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHR++ ++++ QA+ L +RV+LSGTPIQNDL E+F++V FVN G
Sbjct: 458 KGSGIDIVIADEGHRMRTVQNKSAQAIQPLNTSKRVILSGTPIQNDLTEFFAMVDFVNPG 517
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILGT + F KQ+E PI++ Q A + K R E+L + + ++RRT+ LLSKYLP
Sbjct: 518 ILGTFKMFMKQFEGPIVKSQQPGALKRDIEKGKARSEELASLTSLFILRRTADLLSKYLP 577
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T Q +Y +++ S + + + +AL IT LKKLCN P L
Sbjct: 578 PKTEYVLFCNPTSSQANIYRHVLSSPVFQCALGNSD------SALQLITILKKLCNSPSL 631
Query: 460 VMDKIQTGADGFENAMNILPTGYAA--SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ K E++ + L + A+ S + +L S K+ VLD +L I+ TT +K+
Sbjct: 632 LNPKSSD-----EDSTSTLSSLVASLPSSITRRLTPASSGKIRVLDQLLHNIRHTTSEKV 686
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VL+SNYT TLDL +L ++RLDGS KR +V+ FN++S+ F F+LS+KA
Sbjct: 687 VLISNYTSTLDLLGKLLTSLSLSFLRLDGSTPAAKRQALVDDFNRSSSTSVFAFLLSAKA 746
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YRFL G++EEK+ QRQ
Sbjct: 747 GGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRFLLKGALEEKIWQRQ 806
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D + V + FS ELR LF+L+E THD + C
Sbjct: 807 VTKIGLADSVMDQKSGVLQ-FSREELRDLFRLDEGATCQTHDLLGC 851
>gi|322791142|gb|EFZ15704.1| hypothetical protein SINV_11452 [Solenopsis invicta]
Length = 843
Score = 441 bits (1133), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/599 (41%), Positives = 352/599 (58%), Gaps = 30/599 (5%)
Query: 88 STKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNIL 147
S K V A L P L L + P + + D+ + V VDP L L
Sbjct: 189 SRKKFKVSNTNAFVPLSLSKGPTRLALNSEPIVMPYLNSTEWMDQEEQEVSVDPCLVAKL 248
Query: 148 RPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDK 207
R HQR GV F+YEC+ G+R+ D +G I+ADEMGLGKTLQCI L+WT+L++GP KP++ +
Sbjct: 249 REHQRYGVVFLYECLMGLRVPDYFGAILADEMGLGKTLQCIALIWTMLKKGPYGKPIVKR 308
Query: 208 AIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVI 267
+I+ PSSL NW E KWLG P G+K + + + + P N +++I
Sbjct: 309 VLIITPSSLCNNWEKEFVKWLGSH-RIFPYVVGAKTK--------PKDFIKYPKNSVMII 359
Query: 268 SYETF-RSHASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
SYE F + H + NE+ L++CDEGHRLKN + + L K+R++L+GTPIQN
Sbjct: 360 SYEMFIKCHMEI---NEIVFDLIVCDEGHRLKNNNVKAAKLLYEANCKKRIILTGTPIQN 416
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL E+++L+ F+N GILGTA E++ YE PI+ Q A+D + ER +L
Sbjct: 417 DLKEFYALIDFINPGILGTATEYKNYYEEPIVASQCPHANDDVLSLGKERSTELYERTKS 476
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
++RRT + ++KYLP K E V+ ++ QK+LY+ L+ + +N+
Sbjct: 477 FILRRTQSTINKYLPHKYEIVLFCSLSKKQKDLYS-LVTDAWFNKICLEDKNS----MHF 531
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAM-NILPTGYAASYKSGKLLIELSAKLMVLD 503
S I +LKK+CNHP+L +++ EN + N L + K E K+ +L
Sbjct: 532 SIIIALKKICNHPNLFINEK-------ENVLYNALSKTCMSQIKQDNNFNEYCGKVTILQ 584
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-K 562
T+L +K TD+K+VLVS YTQTLDL E + + K++RLDGS R K+ E FN +
Sbjct: 585 TLLRNLK-KTDEKLVLVSYYTQTLDLLEIICDMEKLKFLRLDGSTPSSVRLKITEQFNTR 643
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
T N + +LS+KAGG GLNL GA+RLV+FD DWNPA+D QAMAR+WRDGQK+ ++YR L
Sbjct: 644 TDNSKVLLLSAKAGGVGLNLPGASRLVLFDSDWNPASDMQAMARIWRDGQKRNVYIYRLL 703
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+TG+IEEK+ QRQ K LS VVD + S +EL+ LF L +TIS THD + C
Sbjct: 704 TTGTIEEKIYQRQISKANLSESVVDLNHLGSLKLSTAELKDLFTLANDTISLTHDLMNC 762
>gi|291227441|ref|XP_002733693.1| PREDICTED: RAD54 homolog B-like [Saccoglossus kowalevskii]
Length = 921
Score = 440 bits (1132), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/606 (42%), Positives = 341/606 (56%), Gaps = 60/606 (9%)
Query: 105 DPTAPNALVLYTPP-----QLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY 159
DP +P ALV+ P Q + H+L ID VVVDP LS LRPHQR GV FMY
Sbjct: 295 DPMSPGALVMPRPSPTHQWQYNQHNLPIID-------VVVDPHLSTHLRPHQRAGVLFMY 347
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVK 218
EC+ G++ G I+AD MGLGKTLQ ITL+WTLL+QGP KP++ + +IV PSSLVK
Sbjct: 348 ECIMGMKPSMGQGAILADAMGLGKTLQSITLIWTLLKQGPYGGKPVVKRVLIVTPSSLVK 407
Query: 219 NWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
NW E KWLG + G K D +G+ + P+++ISYE V
Sbjct: 408 NWSQEFRKWLGKERIMVYSAGSDKPAKD---------FGQSTIYPVMIISYELLMKSIKV 458
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + +++CDEGHRLKN +T + L KRR++L+GTPIQNDL E+FS+V F N
Sbjct: 459 IQNVQFDIMICDEGHRLKNSNIKTTSMISNLDVKRRIVLTGTPIQNDLQEFFSIVEFCNP 518
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G LGT+ F++ YE PI++G AS E R +L + +RRT + + YL
Sbjct: 519 GALGTSSGFKRVYEDPIVKGHQPNASQDELLLGETRANELARLTASFTLRRTQEVNTNYL 578
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E VV + + LQ ++Y LI S +R + N GMT L +++LKKLCNHP
Sbjct: 579 PPKVESVVFCRPSKLQLKVYNQLISSSIIRSVLTSSYN---GMTHLLCLSALKKLCNHPV 635
Query: 459 LVM--DKIQ--TGADGFENAMNILPTGYAASY------KSGKLLIELSAKLMVLDTMLAV 508
V K+Q T DG EN IL +S+ +S + S KL+VL ML
Sbjct: 636 FVYRHAKLQDETCVDGEENVQEILYRDVCSSFPERYRDESNAVDYTDSGKLIVLAAMLKS 695
Query: 509 IKMTT-DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF-NKTSNE 566
T ++V+VSNYTQTLDL ++L GY Y RLDGS R +V F +K S++
Sbjct: 696 FHNDTPQQRVVVVSNYTQTLDLLQQLCDKEGYTYGRLDGSTPTATRQDIVNRFTSKYSDQ 755
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F+F+LS KAGG GLNLIGA RL+++D DWNPAND Q GS
Sbjct: 756 FVFLLSCKAGGVGLNLIGAARLILYDIDWNPANDLQ----------------------GS 793
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
IEEK+ QRQ K+ LS VVD +D FS ++L+ LF L ENT THD + C +C +
Sbjct: 794 IEEKIYQRQISKQGLSGAVVDYRKDNNTKFSQADLKDLFSLHENTDCVTHDLLDC-QCSH 852
Query: 687 GIQVKP 692
+ +P
Sbjct: 853 QTESEP 858
>gi|302659152|ref|XP_003021270.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
gi|291185160|gb|EFE40652.1| hypothetical protein TRV_04621 [Trichophyton verrucosum HKI 0517]
Length = 922
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/588 (43%), Positives = 353/588 (60%), Gaps = 39/588 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P A+V+ P + A K V VVVDP+L LR HQREGVKF+YECV
Sbjct: 217 HDPTLPGAVVMKRPSSVPA--------GKQIVDVVVDPILGKHLREHQREGVKFLYECVM 268
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P+I KA+I P +L+ NW
Sbjct: 269 GLRHFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKKALIACPVTLINNWK 328
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG N L+ F T GR +++I YE RS L
Sbjct: 329 KEFKKWLGSDRIGVFVADGKG-----NLLSDF--TMGRS--YSVMIIGYERLRSVQDQLT 379
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + LV+ DEGHRLK ++++ QA+ L RR++LSGTPIQN+L E+F++V FVN
Sbjct: 380 KGPGIDLVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSEFFAMVDFVNPA 439
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F + +E PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 440 LLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLP 499
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q+ +Y +++ S + ++ E +AL IT LKK+CN P L
Sbjct: 500 PKTEYILFCNPTSAQRSVYHHVLASPMFQSVLRNSE------SALQLITILKKVCNSPSL 553
Query: 460 VMDKIQTGADGFENAMNI----LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
+ K++ G + +M+ LP S +G S K+ VLD +L ++ T +
Sbjct: 554 LKPKVEDNGKGEDTSMSALLSSLPPNIHRSLAAGS-----SGKIRVLDQLLYNLQSKTKE 608
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSS 573
K+VLVSNYT TL+L L ++RLDGS KR +VE FN+ +S+ F F+LS+
Sbjct: 609 KVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSA 668
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ Q
Sbjct: 669 KAGGTGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQ 728
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
RQ K L+ V+ + +A HFS EL+ LF+L+E + TH+ + C
Sbjct: 729 RQVTKLGLADSVMGQKGGIA-HFSQEELKDLFRLDEISKCQTHELLGC 775
>gi|327295002|ref|XP_003232196.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
gi|326465368|gb|EGD90821.1| dsDNA-dependent ATPase [Trichophyton rubrum CBS 118892]
Length = 923
Score = 439 bits (1130), Expect = e-120, Method: Compositional matrix adjust.
Identities = 250/584 (42%), Positives = 356/584 (60%), Gaps = 31/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P A+V+ P + A K V VVVDP+L LR HQREGVKF+YECV
Sbjct: 218 HDPTLPGAVVMKRPSSVPA--------GKQIVDVVVDPILGKHLREHQREGVKFLYECVM 269
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P++ KA+IV P +L+ NW
Sbjct: 270 GLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVVKKALIVCPVTLINNWK 329
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG N+++ F T GR +++I YE RS L
Sbjct: 330 KEFKKWLGSDRIGVFVADGKG-----NRISDF--TMGRS--YSVMIIGYERLRSVQDQLT 380
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQN+L E+F++V FVN
Sbjct: 381 KGPGIDIVVADEGHRLKTVQNKSAQAIQSLNTTRRIILSGTPIQNELSEFFAMVDFVNPA 440
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F +++E PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 441 LLGTFKSFMREFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLP 500
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q+ +Y +++ S + ++ E +AL IT LKK+CN P L
Sbjct: 501 PKTEYILFCNPTSAQRSVYHHVLASPMFQSVLRNSE------SALQLITILKKVCNSPSL 554
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K++ + +M+ L + S L S K+ VLD +L ++ T +K+VL
Sbjct: 555 LKPKVEDNGKCEDTSMSALLSSLPPSIHRC-LAAGSSGKIRVLDQLLYNLQSKTTEKVVL 613
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS +R +VE FN+ +S+ F F+LS+KAGG
Sbjct: 614 VSNYTSTLNLLANLLTSLDLPFLRLDGSTPATRRQALVEDFNRSPSSSCFAFLLSAKAGG 673
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ QRQ
Sbjct: 674 TGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVT 733
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D + +A HFS EL+ LF+L+E++ TH+ + C
Sbjct: 734 KLGLADSVMDQKGGIA-HFSQEELKDLFRLDESSKCQTHELLGC 776
>gi|302499754|ref|XP_003011872.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
gi|291175426|gb|EFE31232.1| hypothetical protein ARB_01851 [Arthroderma benhamiae CBS 112371]
Length = 921
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 251/584 (42%), Positives = 354/584 (60%), Gaps = 31/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P A+V+ P + K V VVVDP+L LR HQ+EGVKF+YECV
Sbjct: 217 HDPTLPGAVVMKRPSS--------VPPGKQIVDVVVDPILGKHLREHQKEGVKFLYECVM 268
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P+I KA+IV P +L+ NW
Sbjct: 269 GLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWK 328
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG N+L+ F T GR +++I YE RS L
Sbjct: 329 KEFKKWLGSDRIGVFVADGKG-----NRLSDF--TMGRS--YSVMIIGYERLRSVQDQLT 379
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQN+L E+F++V FVN
Sbjct: 380 KGPGIDIVVADEGHRLKTVQNKSSQAIQSLNTTRRIILSGTPIQNELSEFFAMVDFVNPA 439
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F + +E PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 440 LLGTFKSFMRDFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLP 499
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q+ +Y +++ S + ++ E +AL IT LKK+CN P L
Sbjct: 500 PKTEYILFCNPTSAQRSVYHHVLASPMFQSVLRNSE------SALQLITILKKVCNSPSL 553
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K++ G + +M+ L + + L S K+ VLD +L ++ T +K+VL
Sbjct: 554 LKPKVEDNGKGEDTSMSALLSSLPPNIHRC-LAAGSSGKIRVLDQLLYNLQSKTKEKVVL 612
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS KR +VE FN+ +S+ F F+LS+KAGG
Sbjct: 613 VSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVEDFNRSPSSSCFAFLLSAKAGG 672
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ QRQ
Sbjct: 673 TGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVT 732
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D + +A HFS EL+ LF+L+E + TH+ + C
Sbjct: 733 KLGLADSVMDQKGGIA-HFSQEELKDLFRLDEISKCQTHELLGC 775
>gi|315043318|ref|XP_003171035.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
gi|311344824|gb|EFR04027.1| DNA repair and recombination protein RAD54 [Arthroderma gypseum CBS
118893]
Length = 922
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 248/584 (42%), Positives = 355/584 (60%), Gaps = 31/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P ++V+ P + K V VVVDP++ LR HQREGVKF+YECV
Sbjct: 219 HDPTLPGSVVMQRPNS--------VPLGKQIVDVVVDPIIGRHLREHQREGVKFLYECVM 270
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P+I KA+IV P +L+ NW
Sbjct: 271 GLRPFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWK 330
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG N+L+ F T GR +++I YE RS L
Sbjct: 331 KEFKKWLGSDRIGVFVADGSR-----NRLSDF--TMGRS--YSVMIIGYERLRSVQEQLT 381
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQN+L E+F++V FVN
Sbjct: 382 KGPGIDIVIADEGHRLKTVQNKSAQAIQSLNTSRRIILSGTPIQNELSEFFAMVDFVNPA 441
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F ++++ PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 442 LLGTFKSFMREFDGPIVAARQPNAPKKVVEKGKARSEELAELTSPFILRRTADILSKHLP 501
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q+ +Y +++ S + +K E +AL IT LKK+CN P L
Sbjct: 502 PKTEYILFCNPTSAQRNVYQHVLASPLFQSVLKNSE------SALQLITILKKVCNSPSL 555
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K++ + +M+ + + L+ S K+ VLD +L ++ T +K+VL
Sbjct: 556 LKPKLEDNGKAEDTSMSAFISSLQPNIHRC-LVAGSSGKIRVLDQLLYNLQSKTTEKVVL 614
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS KR +V+ FN++ S+ F F+LS+KAGG
Sbjct: 615 VSNYTSTLNLLANLLTSLDLPFLRLDGSTPASKRQALVDDFNRSPPSSCFAFLLSAKAGG 674
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ QRQ
Sbjct: 675 TGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQRQVT 734
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D + +A HFS EL+ LF+L+EN+ TH+ + C
Sbjct: 735 KLGLADSVMDQKGGIA-HFSQEELKDLFRLDENSKCQTHELLGC 777
>gi|119494890|ref|XP_001264246.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri
NRRL 181]
gi|119412408|gb|EAW22349.1| dsDNA-dependent ATPase (Rad54b), putative [Neosartorya fischeri
NRRL 181]
Length = 969
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 252/584 (43%), Positives = 351/584 (60%), Gaps = 33/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P ALV+ P + K K V VVVDP+LS LR HQREGV+F+YECV
Sbjct: 251 HDPNQPGALVMKRPDS--------VPKGKQIVDVVVDPILSKHLRQHQREGVQFLYECVM 302
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P+I KA+IV P +L+ NW
Sbjct: 303 GMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWR 362
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D K +L F T GR ++++ YE R+ L
Sbjct: 363 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TMGR--AYSVMIVGYEKLRTVQEGLA 413
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 414 RGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 473
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILG + F +++E PI++ + A+ E K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 474 ILGNFKAFVREFEGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTADILAKYLP 533
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T Q +Y N++ S + + EN AL IT LKKLCN P L
Sbjct: 534 PKTEYVLFCNPTSTQANIYKNVLASPVFQCAIGNSEN------ALQLITILKKLCNSPSL 587
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K TG + + L SAK+ VLD +L ++ +T +KIVL
Sbjct: 588 LSPK--TGDEKPSETIAAL-LSSLPPNLLRHFSPSCSAKIRVLDQLLHNLRTSTSEKIVL 644
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGG 577
VSNYT TL++ L ++RLDGS +KR +VE FN+ F F+LS+KAGG
Sbjct: 645 VSNYTSTLNMLANLLNSLSLPFLRLDGSTPAQKRQALVEDFNRLPPNLCFAFLLSAKAGG 704
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C++YR L GS+EE++ QRQ
Sbjct: 705 TGLNLIGASRLVLFDVDWNPATDVQAMARIHRDGQKRHCWIYRVLLKGSLEERIWQRQVT 764
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V++ + VA+ FS EL+ LF+L+E + TH+ + C
Sbjct: 765 KIGLADSVMEHKSSVAQ-FSRDELKDLFRLDEASRCQTHELLGC 807
>gi|328786654|ref|XP_624551.3| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
mellifera]
Length = 821
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 238/551 (43%), Positives = 345/551 (62%), Gaps = 37/551 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V VD L N+LRPHQR G+ F+YEC+ G+++ + +G I+ADEMGLGKTLQCIT++WTLL+
Sbjct: 220 VSVDTCLVNVLRPHQRHGIVFLYECIMGLKVPNYFGAILADEMGLGKTLQCITIIWTLLK 279
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
+GP P++ +IV PSSL NW E WLG R++ ++ NK N+F
Sbjct: 280 KGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNAK------NKPNNF--- 330
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
++ N I++ISYE + + + L++CDEGHRLKN + +T + L L KRR+
Sbjct: 331 -KKQIRNSIMIISYEMLIKYQQEIEQIAFDLIICDEGHRLKNNDIKTTKVLSNLNCKRRI 389
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
LL+GTP+QNDL E+F+L+ FVN ILG++ EF+ YE PI+ Q AS + ER
Sbjct: 390 LLTGTPVQNDLQEFFALIDFVNPVILGSSSEFKNYYEKPIVASQCPNASCHVISLGTERA 449
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY---TNLIKSDAVRRTMK 432
+L ++RRT +++KYLP K E V+ +++D Q++LY TNL S +V
Sbjct: 450 NELHEKTKCFILRRTQEIINKYLPSKHELVIFCRLSDEQEDLYSRITNLWFSKSVLPNN- 508
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
++ L+ IT+LKK+CNHP+L ++ D + N ++I Y
Sbjct: 509 -------NISHLTLITALKKICNHPELFYNE---KNDLYLNKVSIKNITRKGYY------ 552
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
K+ ++ T++ +K T++K+VL+S YTQTLDL ER+ + +++RLDG+ T
Sbjct: 553 ----GKISIVQTLIKNLK-KTNEKLVLISYYTQTLDLLERVCNMECLQFLRLDGNTTSST 607
Query: 553 RAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R+K++E FN T+ N IF+LS+KAGG GLNL GA+RL++FD DWNPA+D QAMAR+WRDG
Sbjct: 608 RSKIIEQFNSTNDNNKIFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAMARIWRDG 667
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
QK ++ R L+TG+IEEK+ QRQ +K LS V+D + S S+L+ LF L NT
Sbjct: 668 QKNDVYILRLLTTGTIEEKIFQRQINKANLSETVIDLNYFSSIKLSTSDLKDLFTLTTNT 727
Query: 672 ISDTHDKIKCS 682
S THD +KCS
Sbjct: 728 NSLTHDLMKCS 738
>gi|241602475|ref|XP_002405194.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
gi|215500578|gb|EEC10072.1| DNA repair and recombination protein RAD54B, putative [Ixodes
scapularis]
Length = 680
Score = 438 bits (1127), Expect = e-120, Method: Compositional matrix adjust.
Identities = 254/611 (41%), Positives = 363/611 (59%), Gaps = 42/611 (6%)
Query: 98 GARKALHDPTAP----NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQRE 153
+RK+ H PT P N+LV+ P H K V VVVD L+ LRPHQ++
Sbjct: 24 ASRKSFHRPTTPLITPNSLVMPRPSH--THQWAHNKKQLPVVDVVVDASLARCLRPHQQQ 81
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVA 212
G+ F+YEC+ +R D G I+ADEMGLGKTLQCITL+WTLLRQGP P++ + II+
Sbjct: 82 GLVFLYECIMEMRPFDGGGAILADEMGLGKTLQCITLVWTLLRQGPYGGYPVLRRIIIIT 141
Query: 213 PSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP-VNPILVISYET 271
PSSLVKNW E KWL + G NK+ F+ R+P + P+L++SYE
Sbjct: 142 PSSLVKNWVKEFKKWLPNSNLRIYYVGQK-----NKVEGFL----RQPSLYPVLILSYEM 192
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
+ + L L++CDE HRLKN + +L L R++L++GTP+QNDL E+F+
Sbjct: 193 YLRVSDSLANINFDLLICDEAHRLKNANIKIAGSLQNLGITRKILVTGTPVQNDLQEFFT 252
Query: 332 LVHFVNQGILGT---------AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
L+ F N GILG FR+ YE PIL+ + A++ ++ R +L I
Sbjct: 253 LIDFCNPGILGKYPYVCQRIGPSSFRRVYEEPILQSRLPQATEEQKELGQARANELSRIT 312
Query: 383 NRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT 442
++RRT ++ YLP K E VV + T LQ +Y L+ S+AV+ + ++ L
Sbjct: 313 ALFVLRRTQDVVQSYLPGKAECVVFCRPTSLQLTVYRELLASNAVQACL----SSYLSCD 368
Query: 443 A---LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYK------SGKLLI 493
A L+ I +L+KLCNHP LV + + F ++ ++LPT + + + L
Sbjct: 369 ANHHLACILALRKLCNHPSLVTPRHMSLWGCFRSSQDLLPTKSQKQFSLDMSKLAAESLE 428
Query: 494 ELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
S KL VL MLA + + +KIV+VSN+T+ L++ + L +GY +VRLDGS + +
Sbjct: 429 ASSGKLKVLAAMLASLWDSSPREKIVVVSNFTRMLNVVQELCACKGYTFVRLDGSTSSTQ 488
Query: 553 RAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R ++VE FN S+ F+F+LS KAGG GLNLIGA+R+V++D DWNPAND QAMARVWRDG
Sbjct: 489 RLEIVERFNSAHSDCFVFLLSCKAGGVGLNLIGASRIVLYDVDWNPANDLQAMARVWRDG 548
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEEN 670
Q + +VYR ++TG++EEK+ QRQ K LS V++ ++D + FS+ +L+ LF LEE
Sbjct: 549 QGRHVYVYRLVTTGTVEEKIYQRQVMKLDLSRTVLEKKQDGKKAKFSLEDLKGLFTLEEG 608
Query: 671 TISDTHDKIKC 681
T S TH + C
Sbjct: 609 TASSTHRLLGC 619
>gi|380027284|ref|XP_003697358.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Apis
florea]
Length = 717
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/556 (42%), Positives = 344/556 (61%), Gaps = 33/556 (5%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V +D L N+LRPHQR G+ F+YEC+ G+++ + +G I+ADEMGLGKTLQCIT++WTLL+
Sbjct: 116 VSIDACLVNVLRPHQRHGIVFLYECIMGLKVPNYFGAILADEMGLGKTLQCITIIWTLLK 175
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
+GP P++ +IV PSSL NW E WLG R++ ++ NK N+F
Sbjct: 176 KGPYGYPILKYVLIVTPSSLCNNWNKEFKHWLGFHRISPYVVNA------KNKPNNF--- 226
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
++ N +++ISYE + + + L++CDEGHRLKN + +T + L L KRR+
Sbjct: 227 -KKQIRNSVMIISYEMLIKYRQEIEQIAFDLIICDEGHRLKNNDIKTTKILSNLNCKRRI 285
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
LL+GTP+QNDL E+F+L+ FVN ILG++ EF+ YE PI+ Q AS + ER
Sbjct: 286 LLTGTPVQNDLQEFFALIDFVNPVILGSSSEFKNYYEKPIVASQCPNASCHVISLGTERA 345
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
+L ++RRT +++KYLP K E V+ +++D Q++LY+ + + +
Sbjct: 346 NELYEKTKCFILRRTQEIINKYLPSKHELVIFCRLSDEQEDLYSRITNLWFNKNVLPNN- 404
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
+ L+ IT+LKK+CNHP+L + + NI GY
Sbjct: 405 ----NIPHLTLITALKKICNHPELFYNDKNDLCLNKVSIKNITRKGYYG----------- 449
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
K+ ++ T++ +K T++K+VL+S YTQTLDL ER+ + +++RLDG+ T R+K
Sbjct: 450 --KISIVQTLIRNLK-KTNEKLVLISYYTQTLDLLERVCNMECLQFLRLDGNTTSNTRSK 506
Query: 556 VVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
++E FN T+ N +F+LS+KAGG GLNL GA+RL++FD DWNPA+D QAMAR+WRDGQK
Sbjct: 507 IIEQFNSTNDNNKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAMARIWRDGQKN 566
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
++ R L+TG+IEEK+ QRQ +K LS VVD + SMS+L+ LF L NT S
Sbjct: 567 DVYILRLLTTGTIEEKIFQRQINKANLSETVVDLNYFSSIKLSMSDLKDLFTLTTNTNSL 626
Query: 675 THDKIKCSRCVNGIQV 690
THD +KCS NG +V
Sbjct: 627 THDLMKCS--CNGYKV 640
>gi|242778005|ref|XP_002479148.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
gi|218722767|gb|EED22185.1| dsDNA-dependent ATPase (Rad54b), putative [Talaromyces stipitatus
ATCC 10500]
Length = 1037
Score = 437 bits (1124), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/599 (42%), Positives = 358/599 (59%), Gaps = 39/599 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP AP ALV+ P K + V VVVDP L+ LR HQREGVKF+YECV
Sbjct: 278 HDPNAPGALVMKRPKTAP--------KGQTIVDVVVDPFLTKHLREHQREGVKFLYECVM 329
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ ITL+WTLL+Q + A P++ KA+IV P +L+ NW
Sbjct: 330 GLRDYNGEGAILADEMGLGKTLQTITLLWTLLKQNFIYEAAPVVKKALIVCPVTLINNWR 389
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D K KL F T G+ +++I YE R+ +L
Sbjct: 390 KEFRKWLGNERIGVFVFDDKRK-----KLTDF--TMGK--AYNVMIIGYEKLRTVQEGLL 440
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ + +V+ DEGHRLK ++++ QA+ L +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 441 KGHGIDIVIADEGHRLKTVQNKSGQAIQALNTAKRIILSGTPIQNDLSEFFAAVDLVNPG 500
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILGT + F K++E PI+R Q A+ + K R E+L + + ++RRT+ +LS+YLP
Sbjct: 501 ILGTYKNFMKEFEGPIVRSQQPEATIRDIEKGETRGEELRELTSMFILRRTADILSRYLP 560
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT--ALSSITSLKKLCNHP 457
KTE V+ T +Q +Y +++ S + T LG T A S +T LKKLCN P
Sbjct: 561 PKTEYVILCNPTSVQASIYRHVLGSPIFQ--------TALGNTEGAFSLLTILKKLCNSP 612
Query: 458 DLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
L+ K T + + + L + + S + + S K+ VLD +L ++ +T +KI
Sbjct: 613 SLLNAK--TDDEPQNSTVATLLSTLSPSLRR-QFSPSSSGKIRVLDQLLHNLRTSTSEKI 669
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKA 575
V+VSNYT TL+L L ++RLDGS KR +V+ FN+ S F F+LS+KA
Sbjct: 670 VIVSNYTSTLNLLGVLLTSLSLPFLRLDGSTPSSKRQSLVDDFNRAPASTCFAFLLSAKA 729
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNL GA+RLV++D DWNPA D QAMAR+ RDGQK+ C++YR + G++EEK+ QRQ
Sbjct: 730 GGTGLNLTGASRLVLYDVDWNPATDLQAMARIHRDGQKRHCYIYRIMLKGALEEKIWQRQ 789
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
K L+ V++ + FS EL+ LF+L E+ TH+ + C +C G + +PPP
Sbjct: 790 VTKIGLADSVMESKSSNMAQFSREELKDLFRLYEDKSCQTHELLNC-KC--GGRGRPPP 845
>gi|158286564|ref|XP_308811.4| AGAP006945-PA [Anopheles gambiae str. PEST]
gi|157020528|gb|EAA04280.4| AGAP006945-PA [Anopheles gambiae str. PEST]
Length = 871
Score = 437 bits (1123), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/554 (45%), Positives = 341/554 (61%), Gaps = 29/554 (5%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC--IMADEMGLGKTLQCITLMW 192
V V V ++ LRPHQREGV F+YECVTG+R+ + GC I+ADEMGLGKTLQCI LM+
Sbjct: 241 VEVQVPLCVTRHLRPHQREGVAFLYECVTGLRMLEPPGCGAILADEMGLGKTLQCIALMY 300
Query: 193 TLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSF 252
TLL+ GP KPL + +IV PSSLV NW EITKWL I G +NKL +
Sbjct: 301 TLLKTGPYGKPLAKRVLIVTPSSLVDNWDREITKWLRSERIFTFIVGP-----NNKLKRY 355
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
Q+ P PIL+ISYE L + L+ CDEGHRLKN + + L L+ +
Sbjct: 356 AQS----PHIPILIISYEMLAKQIGELETVKFDLMFCDEGHRLKNSNVKAFGVLNRLECR 411
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RRVLL+GTPIQNDL E+FSL++FVN G +GT Q+F+ +YETPI+ Q
Sbjct: 412 RRVLLTGTPIQNDLQEFFSLINFVNPGAIGTYQDFKARYETPIVVSQRPGVLPQSIELGI 471
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
ERL +L I R ++RRT ++++YLP K E VV + LQ +L + + + K
Sbjct: 472 ERLNELNAITGRFVLRRTQEVINRYLPDKHEVVVFCHPSALQTQLTRTAL---SFYDSEK 528
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G +N ++ L IT LKK+CNHP LV +Q D E+ +++L + G
Sbjct: 529 GADN---AVSPLQLITILKKICNHPSLV--SVQGKGDP-ESLVHLLAEQLPPWQRMGP-- 580
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
SAKL +++ +L + + +KIV+VS Y++TLD+ L YKY RLDGS
Sbjct: 581 -TDSAKLGIVEALLEAM-LAMQEKIVIVSYYSKTLDMIGGLCDHYNYKYCRLDGSTAGPD 638
Query: 553 RAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R+++V FN +N+ FI +LS+KAGG GLNLIGA+RLV++D DWNPAND QAM+RVWRDG
Sbjct: 639 RSRIVAAFNNPANDSFILLLSAKAGGAGLNLIGASRLVLYDNDWNPANDLQAMSRVWRDG 698
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQ-LEE 669
Q+KP F+YR L+ SIEE++ QRQ K +LS VVD ++++ S EL+ LF ++
Sbjct: 699 QRKPVFIYRLLTAYSIEERIFQRQISKTSLSGTVVDQRQNLSNLKLSEEELKDLFSIIDP 758
Query: 670 NTISD--THDKIKC 681
N +D TH ++C
Sbjct: 759 NAEADCLTHSLLEC 772
>gi|119186353|ref|XP_001243783.1| hypothetical protein CIMG_03224 [Coccidioides immitis RS]
gi|392870497|gb|EAS32304.2| dsDNA-dependent ATPase [Coccidioides immitis RS]
Length = 964
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 254/587 (43%), Positives = 351/587 (59%), Gaps = 38/587 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P A+V+ P + K K V VVVDP+L LR HQREGVK +YECV
Sbjct: 275 HDPNQPGAIVMKRPES--------VPKGKQIVDVVVDPLLGKHLREHQREGVKLLYECVM 326
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTL++Q P+ A P++ KA+IV P +L+KNW
Sbjct: 327 GMRPFNGEGAILADEMGLGKTLQTIALLWTLMKQNPIYGASPVVKKALIVCPVTLIKNWQ 386
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG D + +Y +++I YE R+ L
Sbjct: 387 KEFRKWLGNDRLGVFVADGKHMRLTDFTMG---MSYN------VMIIGYERLRTVQEELA 437
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 438 KGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDLSEFFAMVDFVNPG 497
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + AS + K R E+L G+ ++ ++RRT+ +LSK+LP
Sbjct: 498 LLGTFKMFMKEFEGPIVKSRQPGASKKDIEKGEARSEELAGLTSKFILRRTADILSKHLP 557
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q +Y ++I S + + E +AL IT LKKLCN P L
Sbjct: 558 PKTEYILFCNPTPAQANIYRHVIASPIFQSALGDSE------SALQLITILKKLCNSPSL 611
Query: 460 VMDKIQTGAD---GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
+ K+ + + ++ LP + S K+ VLD +L + TT +K
Sbjct: 612 LTLKVLKDENPNCTISSLISTLPPNLLRHFSPAS-----SGKIRVLDQLLHNLHSTTSEK 666
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSK 574
IVLVSNYT TL+L L Y+RLDGS KR +V+ FN++S++ F F+LS+K
Sbjct: 667 IVLVSNYTSTLNLLAALLSSLSLPYLRLDGSTPASKRQFLVDDFNRSSSKSCFAFLLSAK 726
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNL GA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G +EEK+ QR
Sbjct: 727 AGGIGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQR 786
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
Q K L+ V+D + VA HFS ELR LF+L+E+ THD + C
Sbjct: 787 QVTKLGLADSVMDQKNSVA-HFSREELRDLFRLDEDAECQTHDLLGC 832
>gi|384252387|gb|EIE25863.1| hypothetical protein COCSUDRAFT_64873 [Coccomyxa subellipsoidea
C-169]
Length = 685
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/581 (42%), Positives = 351/581 (60%), Gaps = 33/581 (5%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ--VHVVVDPVLSNILRPHQREGVKFMYE 160
LHDP A +ALVL ++ + K+Q VVVDP L LRPHQREG++F+YE
Sbjct: 12 LHDPHALDALVL---------NMQQWQGGKVQGVAPVVVDPYLGRHLRPHQREGLQFLYE 62
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
CV G+R +G ++AD+MGLGKTLQ I+L+WTLLRQGP KP + + I+V P SL +NW
Sbjct: 63 CVMGLRESGRFGAVLADDMGLGKTLQVISLIWTLLRQGPSGKPAVKRVIVVTPCSLTQNW 122
Query: 221 CNEITKWLGG-RVAALPIDGGSKAE---IDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
+EI KWLG R+ AL + G +A+ +D K + + ++V SYET R H
Sbjct: 123 ADEIKKWLGNERIKALVLQAGPEAKGQVLDFKAGNVWK---------VMVASYETLRKHT 173
Query: 277 SVLHKNEVGLVLCDEGHRLKNCE-SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
L V L++CDEGHRLK S+T AL+ L+ RR+L++GTP+QN+L E+F+L++F
Sbjct: 174 DAL-AGCVDLLVCDEGHRLKAAAGSKTISALLALRCPRRILVTGTPLQNNLDEFFALINF 232
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
VN +LG+ FR+ + PI R +D ++ E ++R +L V+ ++RRT + +
Sbjct: 233 VNPDLLGSMGTFRRIFGDPISRSRDRDSTPEEVALGHQRSAELSRRVDAFMLRRTKEINA 292
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN 455
YLP VV + LQ LY L++S+ V + G +ALS I +++KLCN
Sbjct: 293 AYLPPLHSFVVFCPPSPLQVALYKQLVRSNMVTSLLTSAGGCSEG-SALSCIMAMRKLCN 351
Query: 456 HPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLA-VIKMTTD 514
HPD++ A G E ++ L Y A Y+ G+ + S K+ VL+ +LA V+
Sbjct: 352 HPDMLFVGDDMEAAGLEADLHPL---YPAGYQLGQ--PQHSGKMQVLEGLLAHVLGGKAG 406
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSK 574
+++V+VSN T+TLD + R + VR+ G + KR +V FN+ + + +LS+K
Sbjct: 407 ERVVVVSNSTKTLDRVSAVCDSRRWTTVRICGDVNAAKRQDIVTAFNRHNVGQVLLLSAK 466
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNLIGANRLV+FD DWNPA D QAMAR+WRDGQ KPC +YR L+TG+I+EKM QR
Sbjct: 467 AGGAGLNLIGANRLVLFDTDWNPATDLQAMARIWRDGQTKPCTIYRLLTTGAIDEKMYQR 526
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT 675
Q K L+ + + F+ ELR+LF L +T +T
Sbjct: 527 QLMKGELADAMEQASKQKGPSFTREELRALFSLNTSTSCET 567
>gi|121700957|ref|XP_001268743.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus
NRRL 1]
gi|119396886|gb|EAW07317.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus clavatus
NRRL 1]
Length = 976
Score = 436 bits (1122), Expect = e-119, Method: Compositional matrix adjust.
Identities = 263/611 (43%), Positives = 359/611 (58%), Gaps = 37/611 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P ALV+ P + K K V VVVDP+LS LRPHQREGV+F+YECV
Sbjct: 249 HDPNQPGALVMKRPES--------VPKGKQIVDVVVDPILSKHLRPHQREGVQFLYECVM 300
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+W LL+Q P+ + P+I KA+IV P +L+ NW
Sbjct: 301 GMRSFNGEGAILADDMGLGKTLQTITLLWMLLKQNPIHDSAPVIKKALIVCPVTLINNWR 360
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D K +L F T GR ++++ YE R+ L
Sbjct: 361 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TKGR--AYSVMIVGYEKLRTVQEGLA 411
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +V+ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 412 RGAGVDIVIADEGHRLKTLQNKSGQAIQALNATKRIILSGTPIQNDLKEFFAAVDLVNPG 471
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILGT + F K++E PI+R + A+ E K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 472 ILGTFKAFVKEFEGPIVRSRQPEATRKEIEKGEARNEELRELTSKFMLRRTADILAKYLP 531
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K+E V+ T Q +Y N++ S + + EN AL IT LKKLCN P L
Sbjct: 532 PKSEYVLFCNPTSTQANIYRNVLASPVFQCAIGNSEN------ALHLITILKKLCNSPSL 585
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K AD + SAK+ VLD +L ++ +T +KIVL
Sbjct: 586 LSPK---NADETPSETIAALLSSLPPNLLRHFSPSSSAKIRVLDQLLHNLRTSTSEKIVL 642
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS +KR +VE FN+ + F F+LS+KAGG
Sbjct: 643 VSNYTSTLNLLANLLSSLSLPFLRLDGSTPAQKRQSLVEDFNRLPADLCFAFLLSAKAGG 702
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 703 TGLNLIGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 762
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKP----P 693
K L+ V++ + VA FS ELR LF+L+E + TH+ + C G V+ P
Sbjct: 763 KIGLADSVMEHKSSVA-QFSRDELRDLFRLDEESRCQTHELLGCDCGGTGRTVQSASSVP 821
Query: 694 PLESDCTDDLS 704
P +++ D S
Sbjct: 822 PTDAESKDPTS 832
>gi|261201037|ref|XP_002626919.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
gi|239593991|gb|EEQ76572.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis SLH14081]
Length = 999
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/586 (42%), Positives = 354/586 (60%), Gaps = 37/586 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPTAP A+++ P + K K V VV+DP+L LR HQREGVKF+YECV
Sbjct: 273 HDPTAPGAVIMKRP--------TLVPKGKQVVDVVLDPLLGKHLREHQREGVKFLYECVM 324
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A+P++ KA+IV P +L+ NW
Sbjct: 325 GMRAFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWR 384
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D +L F T G+ +++I YE R+ L
Sbjct: 385 KEFRKWLGNERIGVFVADAKR-----TRLTDF--TMGKS--YSVMIIGYERLRTVQEELS 435
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHR++ ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 436 KGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSRRIILSGTPIQNDLTEFFAMVDFVNPG 495
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + A + K R E+L + + ++RRT+ +LS+YLP
Sbjct: 496 LLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEARSEELANLTSLFILRRTADILSEYLP 555
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T QK +Y +++ S + + E +AL IT LKKLCN P L
Sbjct: 556 PKTEYVLFCNPTSSQKNIYRHVLTSPVFQSALGNSE------SALQLITILKKLCNSPSL 609
Query: 460 VMDK--IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ + +T ++ LP S K+ VLD +L I+ TT +K+
Sbjct: 610 LNPRNCDETPNSTLSALVSSLPPNILRHLSPSS-----SGKIRVLDQLLHNIRHTTSEKV 664
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VL+SNYT TLDL L ++RLDGS KR +V+ FN++S+ F F+LS+KA
Sbjct: 665 VLISNYTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKA 724
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G++EEK+ QRQ
Sbjct: 725 GGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQ 784
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D ++ V++ FS EL+ LF+L+E T THD + C
Sbjct: 785 VTKIGLADSVMDQKKGVSQ-FSREELKDLFRLDEGTTCQTHDLLGC 829
>gi|239607133|gb|EEQ84120.1| dsDNA-dependent ATPase [Ajellomyces dermatitidis ER-3]
Length = 989
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/586 (42%), Positives = 354/586 (60%), Gaps = 37/586 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPTAP A+++ P + K K V VV+DP+L LR HQREGVKF+YECV
Sbjct: 273 HDPTAPGAVIMKRP--------TLVPKGKQVVDVVLDPLLGKHLREHQREGVKFLYECVM 324
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A+P++ KA+IV P +L+ NW
Sbjct: 325 GMRAFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWR 384
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D +L F T G+ +++I YE R+ L
Sbjct: 385 KEFRKWLGNERIGVFVADAKR-----TRLTDF--TMGKS--YSVMIIGYERLRTVQEELS 435
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHR++ ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 436 KGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSRRIILSGTPIQNDLTEFFAMVDFVNPG 495
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + A + K R E+L + + ++RRT+ +LS+YLP
Sbjct: 496 LLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEARSEELANLTSLFILRRTADILSEYLP 555
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T QK +Y +++ S + + E +AL IT LKKLCN P L
Sbjct: 556 PKTEYVLFCNPTSSQKNIYRHVLTSPVFQSALGNSE------SALQLITILKKLCNSPSL 609
Query: 460 VMDK--IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ + +T ++ LP S K+ VLD +L I+ TT +K+
Sbjct: 610 LNPRNCDETPNSTLSALVSSLPPNILRHLSPSS-----SGKIRVLDQLLHNIRHTTSEKV 664
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VL+SNYT TLDL L ++RLDGS KR +V+ FN++S+ F F+LS+KA
Sbjct: 665 VLISNYTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKA 724
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G++EEK+ QRQ
Sbjct: 725 GGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQ 784
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D ++ V++ FS EL+ LF+L+E T THD + C
Sbjct: 785 VTKIGLADSVMDQKKGVSQ-FSREELKDLFRLDEGTTCQTHDLLGC 829
>gi|327351086|gb|EGE79943.1| DsDNA-dependent ATPase [Ajellomyces dermatitidis ATCC 18188]
Length = 1011
Score = 436 bits (1120), Expect = e-119, Method: Compositional matrix adjust.
Identities = 251/586 (42%), Positives = 354/586 (60%), Gaps = 37/586 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPTAP A+++ P + K K V VV+DP+L LR HQREGVKF+YECV
Sbjct: 294 HDPTAPGAVIMKRP--------TLVPKGKQVVDVVLDPLLGKHLREHQREGVKFLYECVM 345
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ A+P++ KA+IV P +L+ NW
Sbjct: 346 GMRAFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYEAQPVVKKALIVCPVTLIDNWR 405
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D +L F T G+ +++I YE R+ L
Sbjct: 406 KEFRKWLGNERIGVFVADAKR-----TRLTDF--TMGKS--YSVMIIGYERLRTVQEELS 456
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHR++ ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 457 KGSGIDIVIADEGHRMRTVQNKSAQAIQSLNTSRRIILSGTPIQNDLTEFFAMVDFVNPG 516
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + A + K R E+L + + ++RRT+ +LS+YLP
Sbjct: 517 LLGTFKMFMKEFEGPIVKSRQPGALKKDIEKGEARSEELANLTSLFILRRTADILSEYLP 576
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T QK +Y +++ S + + E +AL IT LKKLCN P L
Sbjct: 577 PKTEYVLFCNPTSSQKNIYRHVLTSPVFQSALGNSE------SALQLITILKKLCNSPSL 630
Query: 460 VMDK--IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
+ + +T ++ LP S K+ VLD +L I+ TT +K+
Sbjct: 631 LNPRNCDETPNSTLSALVSSLPPNILRHLSPSS-----SGKIRVLDQLLHNIRHTTSEKV 685
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKA 575
VL+SNYT TLDL L ++RLDGS KR +V+ FN++S+ F F+LS+KA
Sbjct: 686 VLISNYTSTLDLLATLLTSLSLPFLRLDGSTPASKRQGLVDDFNRSSSSSVFAFLLSAKA 745
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G++EEK+ QRQ
Sbjct: 746 GGTGLNLIGASRLVLFDVDWNPATDMQAMARIHRDGQKRHCRIYRLLLKGALEEKIWQRQ 805
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D ++ V++ FS EL+ LF+L+E T THD + C
Sbjct: 806 VTKIGLADSVMDQKKGVSQ-FSREELKDLFRLDEGTTCQTHDLLGC 850
>gi|390602016|gb|EIN11409.1| hypothetical protein PUNSTDRAFT_141784 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 980
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 242/596 (40%), Positives = 350/596 (58%), Gaps = 35/596 (5%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP A ALV+ P + H KD V VV+DP+L+ LRPHQ+EGVKF+YECV
Sbjct: 243 LHDPEAEGALVMKNPNK--EHIKKNNAKDLPIVPVVLDPILAVRLRPHQKEGVKFLYECV 300
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNW 220
G+R + GCI+ADEMGLGKTLQ I L+WTLL+Q P A P+I KA+IV P SL+ NW
Sbjct: 301 MGLRKHEGQGCILADEMGLGKTLQTIALVWTLLKQNPYAGVGPVIGKAMIVCPVSLINNW 360
Query: 221 CNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
NE KWLG + + KA I +N+ ++ +LVI YE R+ L
Sbjct: 361 KNEFHKWLGRDRVGVFVGDKDKAHIKQFINTR--------IHQVLVIGYEKLRTVIDDLR 412
Query: 281 --KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+GL++CDEGHRLK+ ++T Q L KRRV+LSGTPIQNDL E+ ++ F N
Sbjct: 413 YCNPPIGLIICDEGHRLKSANNKTSQMFKALNTKRRVILSGTPIQNDLSEFHAMADFCNP 472
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+L + F++ YE PIL+ + + E R QL+ + ++RR +++L YL
Sbjct: 473 GLLDDYKTFKRVYEDPILKSRAVGCTAKEAEIGEARTTQLLNVAKSFVLRRDASILDNYL 532
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E VV + T LQ +++ ++++D + ++G L + I L ++ P
Sbjct: 533 PPKCEYVVFVTPTRLQLSIFSQILRADKLDDLVEGSVAESLAL-----INMLTRVSTSPV 587
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLL--------IELSAKLMVLDTMLAVIK 510
L+ T ++ A Y++ LL + LS KL L ++L +I+
Sbjct: 588 LLK---ATADQAKSKSIQANSIKRNALYQAVALLPERFKIEDVSLSGKLTALASLLRMIR 644
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFI 568
T++K ++VS+YT TL + E+ K++GY Y+RLDG KR + V FNKTS +F+
Sbjct: 645 KHTEEKCIVVSHYTSTLHIIEQFCKVKGYTYLRLDGQTPPTKRQEYVNEFNKTSQSAKFL 704
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LS+KAGG GLNLIGA+RL + D DWNP++D QAMAR+ RDGQK+P F+YRFL+ G+I+
Sbjct: 705 FLLSAKAGGVGLNLIGASRLCLIDSDWNPSHDLQAMARIHRDGQKRPVFIYRFLTAGTID 764
Query: 629 EKMMQRQAHKKALSSCVVDCE---EDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
EK+ QRQ K LS ++ + + F+ +LR +F++ NT TH+ + C
Sbjct: 765 EKIYQRQVTKLGLSDSLMGTDTGGSSKSDSFTAKDLRDIFRVHLNTACHTHELLDC 820
>gi|167385507|ref|XP_001737376.1| DNA repair and recombination protein RAD54B [Entamoeba dispar
SAW760]
gi|165899842|gb|EDR26336.1| DNA repair and recombination protein RAD54B, putative [Entamoeba
dispar SAW760]
Length = 764
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/567 (43%), Positives = 343/567 (60%), Gaps = 42/567 (7%)
Query: 131 DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
DK + +++DP + LRPHQ EGVKFMY C+ +R + GCI+ADEMGLGKTLQ ITL
Sbjct: 179 DKKEPAILIDPYIGKFLRPHQIEGVKFMYHCI--MRGGEC-GCILADEMGLGKTLQTITL 235
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID-GGSKAEIDNKL 249
+WT+ +Q I K +IV P SL+ NW E KWLG V +P+ G S + + K+
Sbjct: 236 IWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLG--VERIPVQTGSSDSSMKEKV 288
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
N F++ Y P+L+ISYE RSH L K ++GL++CDEGHR+KN S+T +L L
Sbjct: 289 NDFIRDYI-----PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNSSLKAL 343
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
A R ++LSGTP+QN L +++SL+ F + G LGT F++ + PI + QD AS E
Sbjct: 344 GAPRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQ 403
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
ER ++L +N ++RRTS + KYLP KTE V+ IK + LQ +LY ++K ++
Sbjct: 404 LGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSHLQIKLYKIMLKELDKKK 463
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF-ENAMNILPTGYAASYKS 488
+ G AL I KLCNHP L+ + EN N + G + +S
Sbjct: 464 LDQCG--------ALKYIQLFTKLCNHPALISKYLMEEKISLNENDENCI-KGVTINEES 514
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL-------RGYKY 541
S K + + I + + +K+VLVSNYT+TLDLFE K + + Y
Sbjct: 515 -------SNKFNITIQFIKEIIIKSKEKVVLVSNYTKTLDLFEMYFKQEEEYKQKKIFNY 567
Query: 542 VRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
+RLDG + K+R +VE N K+SN I +LSSKAGG GLNLIG +RL++FDPDWNPA D
Sbjct: 568 LRLDGKTSQKQRDIIVEKINDKSSNFNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKD 627
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QAMAR+WRDGQ+K +YR L TG+IEEK+ QRQ K +S +++ ++ + S+ +
Sbjct: 628 KQAMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQ 687
Query: 661 LRSLFQLEENTISDTHDKIKCSRCVNG 687
L +F+L +TISDTHD ++C C NG
Sbjct: 688 LMKIFELNTDTISDTHDLLQCD-CFNG 713
>gi|350408475|ref|XP_003488415.1| PREDICTED: DNA repair and recombination protein RAD54B-like [Bombus
impatiens]
Length = 820
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/556 (40%), Positives = 342/556 (61%), Gaps = 29/556 (5%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
D + + V VD L N+LRPHQR G+ F+YEC+ G+++ + +G I+ADEMGLGKTLQCI
Sbjct: 213 DMSENETEVFVDTCLVNVLRPHQRHGIVFLYECIMGLKVSNHFGAILADEMGLGKTLQCI 272
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDN 247
T++WTLL++GP P++ +IV PS L NW E +WLG R++ ++ +KA
Sbjct: 273 TIIWTLLKKGPYGYPILKYILIVTPSCLCNNWNKEFKQWLGFHRISPYVVNAKNKA---- 328
Query: 248 KLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
+ + + N +++ISY+ + + L++CDEGHRLKN + + + L
Sbjct: 329 ------KDFKKHIRNSVMIISYDLLTRCEQEVKEIPFNLIICDEGHRLKNNDIKAAKILY 382
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
LK KR++LL+GTPIQN+L E+F+L+ FVN ILG+ EF+ YE PI+ Q A D
Sbjct: 383 NLKCKRKILLTGTPIQNNLQEFFTLIDFVNPTILGSNSEFKNYYEKPIVASQCPTAPDHV 442
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
+ ER +L ++RRT ++KYLP K E +V +++ Q++LY+ + S
Sbjct: 443 VSLGTERANELREKTKCFILRRTQETINKYLPSKHELIVFCRLSIEQQDLYSQVTDS-WF 501
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYK 487
+++ + L+ IT+LKK+CNHP+L ++ +T ++ + + Y
Sbjct: 502 NKSLSDN-----NIPHLTVITALKKICNHPELFYNE-KTELFCIDSKTSNIKDSTKTVY- 554
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
K+ ++ T+L +K T++K+VLVS YTQTLD+ E + G +++RLDGS
Sbjct: 555 --------CGKISIVQTLLRNLK-KTEEKLVLVSYYTQTLDILETVCNKEGLQFLRLDGS 605
Query: 548 MTIKKRAKVVETFNKTSNEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
T R+K++E FN TS++ +F+LS+KAGG GLNL GA+RL++FD DWNPA+D QAMAR
Sbjct: 606 TTSNTRSKIIERFNSTSDKSKVFLLSAKAGGVGLNLPGASRLILFDSDWNPASDSQAMAR 665
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
+WRDGQKK ++ R L+TG+IEEK+ QRQ K +L+ VVD + S++EL+ LF
Sbjct: 666 IWRDGQKKDVYILRLLTTGTIEEKIFQRQISKASLNETVVDLNPSSSFKLSINELKDLFT 725
Query: 667 LEENTISDTHDKIKCS 682
L NT THD + CS
Sbjct: 726 LTANTNCLTHDLMNCS 741
>gi|426197383|gb|EKV47310.1| hypothetical protein AGABI2DRAFT_204339 [Agaricus bisporus var.
bisporus H97]
Length = 966
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 249/606 (41%), Positives = 355/606 (58%), Gaps = 46/606 (7%)
Query: 93 GVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQR 152
G+ + LHDP A ALV+ P + L K K + VVVDP+L+ +R HQR
Sbjct: 281 GISKPKVSGPLHDPNAEGALVMKKPTSTHSEKL----KMKPIIPVVVDPILTRRMRDHQR 336
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAII 210
EGVKF+YECV G+ + GCI+ADEMGLGKTLQ I L+WTLL+Q P A P++ K +I
Sbjct: 337 EGVKFLYECVMGLSKHEGQGCILADEMGLGKTLQTIALVWTLLKQNPYLGAGPVVKKVMI 396
Query: 211 VAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
V P SL+ NW +E KWLG RV I SK I+ + + +PIL+I Y
Sbjct: 397 VCPVSLMNNWRSEFYKWLGRDRVG---IATYSKDPIE------LHGFKNSSAHPILIIGY 447
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
E RS ++ L++CDEGHRLK+ +++T Q K +RR++LSGTPIQNDL E+
Sbjct: 448 ERLRSMVP-----QIDLIICDEGHRLKSSQTKTNQMFKDFKTRRRIILSGTPIQNDLSEF 502
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
++ F N G+L +FR YE PIL+ + AS E R QL+ + ++RR
Sbjct: 503 HAMTEFCNPGLLENYPKFRSFYEVPILKSRSPDASTKEIEIGEARTSQLLVVAKSYVLRR 562
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
+ LL+ YLP K E VV I T LQ +++ ++ SD ++ +NT AL+ I
Sbjct: 563 DANLLNNYLPPKHEYVVFISPTPLQLQIFRKILTSDRGDDIIE--QNTT--AEALALIGI 618
Query: 450 LKKLCNHPDLVMDKIQTGADGFEN----------AMNILPTGYAASYKSGKLLIELSAKL 499
K+ N P +++ + A+G EN A ++P G S LS KL
Sbjct: 619 FTKISNSP-ILLKAMAANAEGKENSIFQKRNVADATKLVPVGAQIEDMS------LSGKL 671
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
+ L +L V+ TT++K VLVS+YT TL++ E K + Y Y RLDG +R V +
Sbjct: 672 IALSNILKVVHETTEEKCVLVSHYTSTLNILEAFCKKKQYSYFRLDGQTPQAQRQGYVNS 731
Query: 560 FNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN+++ N FIF+LSSKAGG G+NLIGA+RL + D DWNP++D Q+MAR RDGQK+P F
Sbjct: 732 FNRSNQRNGFIFLLSSKAGGVGINLIGASRLFLVDSDWNPSHDIQSMARCHRDGQKRPVF 791
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSLFQLEENTISDT 675
+YR L+ G+I+EK+ QRQ K ALS ++ + ++ F+ +L+ +F++ NT S+T
Sbjct: 792 IYRLLTAGAIDEKIYQRQLTKLALSDSLIGGTANASKSDTFTKRDLQDIFRIHVNTSSNT 851
Query: 676 HDKIKC 681
HD ++C
Sbjct: 852 HDLLEC 857
>gi|290982366|ref|XP_002673901.1| predicted protein [Naegleria gruberi]
gi|284087488|gb|EFC41157.1| predicted protein [Naegleria gruberi]
Length = 873
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 233/547 (42%), Positives = 334/547 (61%), Gaps = 24/547 (4%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V +D L LRPHQ EGVKFMYEC G++ GC++ADEMGLGKTLQ ITL++TLLR
Sbjct: 240 VFIDNFLGENLRPHQVEGVKFMYECAMGLKDFVGKGCLLADEMGLGKTLQTITLIYTLLR 299
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGS-KAEIDNKLNSFMQ 254
+GP P+I KAI+V SSLVKNW +E KW+G ++ L + + K L F
Sbjct: 300 RGPFGSPIIKKAIVVTNSSLVKNWTSEFDKWVGEDKIKVLTVTTKTAKQSPSETLKIFKA 359
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
Y + +L+ISY ++ L + +++CDEGH+LKN + +Q L + RR
Sbjct: 360 GYHQ-----VLIISYNLCTNYVEELQDCQCDILICDEGHKLKNANIKIFQTLKKISTPRR 414
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++LSGTP+QNDL E+F++ F+N G+LG A F+ + PI + Q+ A ++ R
Sbjct: 415 IVLSGTPLQNDLNEFFTICDFINPGLLGDATSFKNLFTEPIKKSQEPNAKKQDKVIGENR 474
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
++L IV++ ++RRT+ LL ++LP K E V+ MT+LQ+ LY + + S A+R + G
Sbjct: 475 SKELNKIVSQFVLRRTNLLLRQHLPPKMEIVLFCGMTELQENLYKHFVLSKALRGVINGT 534
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA----------DGFENAMNILPTGYAA 484
++ AL+ I LKKL HP+++ + D + + P+ Y
Sbjct: 535 LDSN---NALACIMHLKKLLAHPNMIYPQENNEEKEEEDNELFDDIWTQSKKHFPSDYNP 591
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
+ K + + S KL+VLD +L I+ D++V+VSN+ L+ E+L K+R Y RL
Sbjct: 592 NDKK-EYHSQYSGKLLVLDNLLREIR-EVGDRVVIVSNFKSILNEIEKLCKIRDYPLSRL 649
Query: 545 DGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DGS +KR +V +FN SN+FIF+LSSKAGGCGLNLIGANRL+M DPDWNP+ND+QA
Sbjct: 650 DGSTQSEKRMVIVNSFNSPKSNDFIFLLSSKAGGCGLNLIGANRLIMIDPDWNPSNDEQA 709
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
MARVWRDGQKK F+YR + G+IEEK+ QRQ K LS +D E+ + FS L+
Sbjct: 710 MARVWRDGQKKSVFIYRMIGCGTIEEKIFQRQIVKTGLSKSTLD-EKSLKSQFSSEMLKE 768
Query: 664 LFQLEEN 670
LF+ + +
Sbjct: 769 LFKYDND 775
>gi|46805904|dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
Length = 912
Score = 434 bits (1117), Expect = e-119, Method: Compositional matrix adjust.
Identities = 277/736 (37%), Positives = 387/736 (52%), Gaps = 143/736 (19%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGV-RREGARKAL--HDPTAPNAL--VLYTPPQLSAHD 124
I KPFK P N GYS + RR ARK P A+ +L P +S+ D
Sbjct: 137 IARKPFKPPCQN----GYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDD 192
Query: 125 LLKI-------------------DKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTG 164
++ DK+ + VD +L LRPHQREGV+FM++CV+G
Sbjct: 193 SVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSG 252
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
+ +D GCI+AD+MGLGKTLQ ITL++TLL QG AKP++ +A++V P+SLV NW +E
Sbjct: 253 LLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE 312
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-N 282
I KWL GRV L + ++A++ + + SF++ R V L++SYETFR H+S +
Sbjct: 313 IIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPG 369
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+FS+V+F N G+LG
Sbjct: 370 SCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLG 429
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
A FR+ YE PI+ G++ AS E+ +ER +L VN ++RRT+ALLS +LP K
Sbjct: 430 DATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKI 489
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+VVC K+T LQ LY + I S V+R + G L+ IT+LKKLCNHP L+ D
Sbjct: 490 VEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS---KVLAYITALKKLCNHPKLIYD 546
Query: 463 KIQ---TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
I+ +G GF++ + P S +SG +
Sbjct: 547 TIKSNNSGGSGFDDCLRFFPPEL-FSGRSGFV---------------------------- 577
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGC 578
TLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LSSKAGGC
Sbjct: 578 ------TLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGC 631
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GLNL+G NRL++FDPDWNPAND Q R +S +++ + Q QA
Sbjct: 632 GLNLVGGNRLILFDPDWNPANDKQVYQRQ--------------MSKEGLQKVIQQEQADG 677
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-------VNGIQVK 691
K S + S +LR LF E S+ H+ +KC+RC ++G +
Sbjct: 678 KMQGSSL-----------STEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCMVLDGSKFD 726
Query: 692 PPPLESDCTD-----------------------------------DLSCWHHVTEKRWLV 716
E + ++ DL W H ++ +
Sbjct: 727 SAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGHHSDPSTVP 786
Query: 717 DPILKHCWGAGVSFVF 732
D IL+ G VSFVF
Sbjct: 787 DTILQCSSGDEVSFVF 802
>gi|449704175|gb|EMD44466.1| DNA repair protein, putative [Entamoeba histolytica KU27]
Length = 764
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 252/625 (40%), Positives = 357/625 (57%), Gaps = 51/625 (8%)
Query: 131 DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
DK + +++DP + LRPHQ EGVKFMY C+ +R + GCI+ADEMGLGKTLQ ITL
Sbjct: 179 DKKEPAILIDPYIGKFLRPHQIEGVKFMYHCI--MRGGEC-GCILADEMGLGKTLQTITL 235
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID-GGSKAEIDNKL 249
+WT+ +Q I K +IV P SL+ NW E KWLG V +P+ G S + + K+
Sbjct: 236 IWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLG--VERIPVQTGSSDSSMKEKV 288
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
N F++ Y P+L+ISYE RSH L K ++GL++CDEGHR+KN S+T +L L
Sbjct: 289 NDFIRDYI-----PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNSSLKAL 343
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
R ++LSGTP+QN L +++SL+ F + G LGT F++ + PI + QD AS E
Sbjct: 344 GGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQ 403
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
ER ++L +N ++RRTS + KYLP KTE V+ IK + LQ +LY +
Sbjct: 404 LGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLY---------KI 454
Query: 430 TMKGGENTKLGM-TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
+K E KL +AL I KLCNHP L+ + G + + +S
Sbjct: 455 MLKELEKKKLDQCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKCIKGISLNEES 514
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE-------RLSKLRGYKY 541
S K + + I + + +K+VLVSNYT+TLDLFE + + + Y
Sbjct: 515 -------SNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEEYKQKKIFNY 567
Query: 542 VRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
+RLDG + K+R +VE N K+SN I +LSSKAGG GLNLIG +RL++FDPDWNPA D
Sbjct: 568 LRLDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKD 627
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QAMAR+WRDGQ+K +YR L TG+IEEK+ QRQ K +S +++ ++ + S+ +
Sbjct: 628 KQAMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQ 687
Query: 661 LRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
L +F+L NTI DTHD ++C C G + + D L + E+ +DP++
Sbjct: 688 LMKIFELNTNTICDTHDLLQCDCCNGGYKTEE--------DTLHLIPKMKEEIKSIDPLI 739
Query: 721 KHCWGAG--VSFVFYQHSTKAEKSK 743
G VS +F +K K
Sbjct: 740 STIEGINKMVSMLFVNEFHNKQKMK 764
>gi|407035016|gb|EKE37494.1| DNA repair protein, putative [Entamoeba nuttalli P19]
Length = 764
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 253/625 (40%), Positives = 357/625 (57%), Gaps = 51/625 (8%)
Query: 131 DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
DK + +++DP + LRPHQ EGVKFMY C+ +R + GCI+ADEMGLGKTLQ ITL
Sbjct: 179 DKKEPAILIDPYIGKFLRPHQIEGVKFMYHCI--MRGGEC-GCILADEMGLGKTLQTITL 235
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID-GGSKAEIDNKL 249
+WT+ +Q I K +IV P SL+ NW E KWLG V +P+ G S + + K+
Sbjct: 236 IWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLG--VERIPVQTGSSDSSMKEKV 288
Query: 250 NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
N F++ Y P+L+ISYE RSH L K ++GL++CDEGHR+KN S+T +L L
Sbjct: 289 NDFIRDYI-----PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNSSLKAL 343
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
R ++LSGTP+QN L +++SL+ F + G LGT F++ + PI + QD AS E
Sbjct: 344 GGSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQ 403
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
ER ++L +N ++RRTS + KYLP KTE V+ IK + LQ +LY +
Sbjct: 404 LGTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLY---------KI 454
Query: 430 TMKGGENTKLGM-TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
+K E KL +AL I KLCNHP L+ + G + + +S
Sbjct: 455 MLKELEKKKLDQCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKCIKGISLNEES 514
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL-------RGYKY 541
S K + + I + + +K+VLVSNYT+TLDLFE K + + Y
Sbjct: 515 -------SNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEENKQKKIFNY 567
Query: 542 VRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
+RLDG + K+R +VE N K+SN I +LSSKAGG GLNLIG +RL++FDPDWNPA D
Sbjct: 568 LRLDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKD 627
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QAMAR+WRDGQ+K +YR L TG+IEEK+ QRQ K +S +++ ++ + S+ +
Sbjct: 628 KQAMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQ 687
Query: 661 LRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
L +F+L NTI DTHD ++C C G + + D L + E+ +DP++
Sbjct: 688 LMKIFELNTNTICDTHDLLQCDCCNGGYKTEE--------DTLHLIPKMKEEIKSIDPLI 739
Query: 721 KHCWGAG--VSFVFYQHSTKAEKSK 743
G VS +F +K K
Sbjct: 740 STIEGINKMVSMLFVNEFHNKQKMK 764
>gi|409080483|gb|EKM80843.1| hypothetical protein AGABI1DRAFT_71424 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 967
Score = 433 bits (1114), Expect = e-118, Method: Compositional matrix adjust.
Identities = 248/606 (40%), Positives = 355/606 (58%), Gaps = 46/606 (7%)
Query: 93 GVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQR 152
G+ + LHDP A ALV+ P + L K K + VVVDP+L+ +R HQR
Sbjct: 279 GISKPKVSGPLHDPNAEGALVMKKPTSTHSEKL----KMKPIIPVVVDPILTRRMRDHQR 334
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAII 210
EGVKF+YECV G+ + GCI+ADEMGLGKTLQ I L+WTLL+Q P A P++ K +I
Sbjct: 335 EGVKFLYECVMGLSKHEGQGCILADEMGLGKTLQTIALVWTLLKQNPYLGAGPVVKKVMI 394
Query: 211 VAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
V P SL+ NW +E KWLG RV I SK I+ + + +PIL+I Y
Sbjct: 395 VCPVSLMNNWRSEFYKWLGRDRVG---IATYSKDPIE------LHGFKNSSTHPILIIGY 445
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
E RS ++ L++CDEGHRLK+ +++T Q K +RR++LSGTPIQNDL E+
Sbjct: 446 ERLRSMVP-----QIDLIICDEGHRLKSSQTKTNQMFKDFKTRRRIILSGTPIQNDLSEF 500
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
++ F N G+L +FR YE PIL+ + AS E R QL+ + ++RR
Sbjct: 501 HAMTEFCNPGLLDDYPKFRSFYEVPILKSRSPDASTKEIEIGEARTSQLLVVAKSYVLRR 560
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
+ LL+ YLP K E VV I T LQ +++ ++ SD ++ +NT AL+ I
Sbjct: 561 DANLLNNYLPPKHEYVVFISPTPLQLQIFRKILTSDREDDIIE--QNTT--AEALALIGI 616
Query: 450 LKKLCNHPDLVMDKIQTGADGFEN----------AMNILPTGYAASYKSGKLLIELSAKL 499
K+ N P +++ + A+G EN A ++P G S LS KL
Sbjct: 617 FTKISNSP-ILLKAMAANAEGKENSIFQKRNVADATKLVPVGAQIEDMS------LSGKL 669
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
+ L +L V+ TT++K VLVS+YT TL++ E + + Y Y RLDG +R V +
Sbjct: 670 IALSNILKVVHETTEEKCVLVSHYTSTLNILEAFCRKKQYSYFRLDGQTPQAQRQGYVNS 729
Query: 560 FNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN+++ N FIF+LSSKAGG G+NLIGA+RL + D DWNP++D Q+MAR RDGQK+P F
Sbjct: 730 FNRSNQRNGFIFLLSSKAGGVGINLIGASRLFLVDSDWNPSHDIQSMARCHRDGQKRPVF 789
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSLFQLEENTISDT 675
+YR L+ G+I+EK+ QRQ K ALS ++ + ++ F+ +L+ +F++ NT S+T
Sbjct: 790 IYRLLTAGAIDEKIYQRQMTKLALSDSLIGGTANASKSDTFTKRDLQDIFRIHVNTPSNT 849
Query: 676 HDKIKC 681
HD ++C
Sbjct: 850 HDLLEC 855
>gi|297599954|ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa Japonica Group]
Length = 879
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 262/646 (40%), Positives = 362/646 (56%), Gaps = 101/646 (15%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGV-RREGARKAL--HDPTAPNAL--VLYTPPQLSAHD 124
I KPFK P N GYS + RR ARK P A+ +L P +S+ D
Sbjct: 137 IARKPFKPPCQN----GYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDD 192
Query: 125 LLKI-------------------DKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTG 164
++ DK+ + VD +L LRPHQREGV+FM++CV+G
Sbjct: 193 SVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSG 252
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
+ +D GCI+AD+MGLGKTLQ ITL++TLL QG AKP++ +A++V P+SLV NW +E
Sbjct: 253 LLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE 312
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-N 282
I KWL GRV L + ++A++ + + SF++ R V L++SYETFR H+S +
Sbjct: 313 IIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPG 369
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+FS+V+F N G+LG
Sbjct: 370 SCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLG 429
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
A FR+ YE PI+ G++ AS E+ +ER +L VN ++RRT+ALLS +LP K
Sbjct: 430 DATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKI 489
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+VVC K+T LQ LY + I S V+R + G L+ IT+LKKLCNHP L+ D
Sbjct: 490 VEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS---KVLAYITALKKLCNHPKLIYD 546
Query: 463 KIQ---TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
I+ +G GF++ + P S +SG +
Sbjct: 547 TIKSNNSGGSGFDDCLRFFPPEL-FSGRSGFV---------------------------- 577
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGC 578
TLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LSSKAGGC
Sbjct: 578 ------TLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSSKAGGC 631
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GLNL+G NRL++FDPDWNPAND Q R +S +++ + Q QA
Sbjct: 632 GLNLVGGNRLILFDPDWNPANDKQVYQRQ--------------MSKEGLQKVIQQEQADG 677
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
K S + S +LR LF E S+ H+ +KC+RC
Sbjct: 678 KMQGSSL-----------STEDLRDLFTFHEQIRSEIHENLKCNRC 712
>gi|70996252|ref|XP_752881.1| dsDNA-dependent ATPase (Rad54b) [Aspergillus fumigatus Af293]
gi|66850516|gb|EAL90843.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus
Af293]
Length = 969
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 254/584 (43%), Positives = 349/584 (59%), Gaps = 33/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P ALV+ P + K K V VVVDP+LS LR HQREGV+F+YECV
Sbjct: 251 HDPNQPGALVMKRPDS--------VPKGKQIVDVVVDPILSKHLRQHQREGVQFLYECVM 302
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P+I KA+IV P +L+ NW
Sbjct: 303 GMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWR 362
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D K +L F T GR ++++ YE R+ L
Sbjct: 363 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TMGR--AYSVMIVGYEKLRTVQEGLA 413
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 414 RGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 473
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILG + F +++E PI++ + A+ E K R E+L + ++ ++RRT +L+KYLP
Sbjct: 474 ILGNFKAFVREFEGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTVDILAKYLP 533
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T Q +Y N++ S + + EN AL IT LKKLCN P L
Sbjct: 534 PKTEYVLFCNPTSTQATIYKNVLASPVFQCAIGNSEN------ALQLITILKKLCNSPSL 587
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K TG + + L SAK+ VLD +L ++ +T +KIVL
Sbjct: 588 LSPK--TGDERPSETITAL-LSSLPPNLLRHFTPSCSAKIRVLDQLLHNLRTSTSEKIVL 644
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS +KR +VE FN+ F F+LS+KAGG
Sbjct: 645 VSNYTSTLNLLANLLNSLSLPFLRLDGSTPAQKRQALVEDFNRLPPNRCFAFLLSAKAGG 704
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 705 TGLNLIGASRLVLFDVDWNPATDVQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 764
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V++ + VA+ FS EL+ LF+L+E + TH+ + C
Sbjct: 765 KIGLADSVMEHKNSVAQ-FSRDELKDLFRLDEASRCQTHELLGC 807
>gi|440300865|gb|ELP93312.1| lymphoid-specific helicase, putative [Entamoeba invadens IP1]
Length = 918
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 268/690 (38%), Positives = 381/690 (55%), Gaps = 70/690 (10%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
L DP AP A+VLY P S + +V +VVDP+L LRPHQ+ GVKFM++CV
Sbjct: 234 LFDPRAPGAVVLYEPSATS----------RGEVAIVVDPILGLKLRPHQKAGVKFMFDCV 283
Query: 163 TGVRIE-DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
G++ GCI+AD MGLGKT+Q ++LM+TLL+QG +P K ++VAPSSLV NW
Sbjct: 284 MGLKTGFRGNGCILADGMGLGKTIQAVSLMFTLLKQGINGEPTCKKVMVVAPSSLVGNWE 343
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
NE KWLG + + S + D ++ Y +LVISY+ R H +
Sbjct: 344 NEFKKWLGDKAPRVVAIASSGKKADQAMSDMEYGYAE-----VLVISYDQLRIHIDKIEL 398
Query: 282 -NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
+ G+++CDEGHRLKN + ++ QA+ + +RRV+LSGTPIQN+L E++++V FVN +
Sbjct: 399 IKDWGMIVCDEGHRLKNADIKSSQAVSRVPTRRRVILSGTPIQNELGEFYAMVSFVNPNV 458
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
L FR+ +E PIL + + + ++ NER ++L + ++RRTS + KYLP
Sbjct: 459 LSEISTFRRIFEEPILISRQADCTPEQKKTGNERSKELTRLTKLFILRRTSKVNQKYLPP 518
Query: 401 KTEQVVCIKMTDLQKELYTNLI------KSDAVRR------------------------- 429
K + VV +T LQK +Y LI + +A ++
Sbjct: 519 KVQHVVFCALTPLQKMIYQRLIDYYNTTRDEAKKKRALQPKEKKPKREKSTTPDLSEEKK 578
Query: 430 ----TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
+ T G +T+LKK+ NHP L+ D ++T E ILP G A
Sbjct: 579 GKAKRGRKKGETVEGSCQFQILTALKKVSNHPWLIQDFVKTFP---EVLSGILPKGEAL- 634
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
+ LS K L +L ++ +KIV+VSNYT+TL+ K GY +++LD
Sbjct: 635 -----YDMNLSGKTAFLAELLEYLRRHK-EKIVIVSNYTETLNFIAHYCKKCGYPFIQLD 688
Query: 546 GSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
GS+ +KR ++V FN S +EFIF+LSSKAGGCGLNLIG LVMFDPDWNPAND+QAM
Sbjct: 689 GSVPAQKRTQMVTRFNDPSLDEFIFLLSSKAGGCGLNLIGGANLVMFDPDWNPANDEQAM 748
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS-CVVDCEEDVARHFSMSELRS 663
RVWRDGQKK C +YR LS+G++EEKM QRQ K L+ V EE+ F EL+
Sbjct: 749 GRVWRDGQKKKCHIYRTLSSGTVEEKMYQRQIKKLELAGKVVEGGEENEESTFDDKELKE 808
Query: 664 LFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDL--SCWHHVTEKRWLVDPILK 721
L Q ++TI +THD + C+ C G + +SD ++ W H K + D +
Sbjct: 809 LCQF-KDTICETHDLLGCT-CGAGSRKNIDWKKSDGKMEVLRKEWKHFNGKSKMEDDVFL 866
Query: 722 HCWGAGVSFVFYQHST--KAEKSKVVTEEE 749
++F+F + K + VV EE+
Sbjct: 867 ALKHETINFLFSKEDEQLKDDGEDVVVEEK 896
>gi|183234185|ref|XP_650328.2| DNA repair protein [Entamoeba histolytica HM-1:IMSS]
gi|169801218|gb|EAL44942.2| DNA repair protein, putative [Entamoeba histolytica HM-1:IMSS]
Length = 764
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 250/624 (40%), Positives = 355/624 (56%), Gaps = 49/624 (7%)
Query: 131 DKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
DK + +++DP + LRPHQ EGVKFMY C+ +R + GCI+ADEMGLGKTLQ ITL
Sbjct: 179 DKKEPAILIDPYIGKFLRPHQIEGVKFMYHCI--MRGGEC-GCILADEMGLGKTLQTITL 235
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
+WT+ +Q I K +IV P SL+ NW E KWLG ++ G S + + K+N
Sbjct: 236 IWTVYKQCN-----IKKIVIVCPQSLIGNWEKEFKKWLGVERISVQ-TGSSDSSMKEKVN 289
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
F++ Y P+L+ISYE RSH L K ++GL++CDEGHR+KN S+T +L L
Sbjct: 290 DFIRDYI-----PVLIISYEQVRSHVETLKKTKIGLIVCDEGHRIKNLMSKTNSSLKALG 344
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R ++LSGTP+QN L +++SL+ F + G LGT F++ + PI + QD AS E
Sbjct: 345 GSRHIILSGTPVQNGLEDFYSLIEFCSPGCLGTLSSFKRVFAIPIQKAQDGNASIEEIQL 404
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
ER ++L +N ++RRTS + KYLP KTE V+ IK + LQ +LY +
Sbjct: 405 GTERAKELTNKLNDYVLRRTSQVNEKYLPDKTEIVLFIKPSYLQIKLY---------KIM 455
Query: 431 MKGGENTKLGM-TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+K E KL +AL I KLCNHP L+ + G + + +S
Sbjct: 456 LKELEKKKLDQCSALKYIQLFTKLCNHPSLISKYLTEEKISLNENDEKCIKGISLNEES- 514
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE-------RLSKLRGYKYV 542
S K + + I + + +K+VLVSNYT+TLDLFE + + + Y+
Sbjct: 515 ------SNKFNITIQFIKEILIKSKEKVVLVSNYTKTLDLFEIYFKQEEEYKQKKIFNYL 568
Query: 543 RLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDG + K+R +VE N K+SN I +LSSKAGG GLNLIG +RL++FDPDWNPA D
Sbjct: 569 RLDGKTSQKQRDIIVEKINDKSSNYNILLLSSKAGGVGLNLIGCSRLILFDPDWNPAKDK 628
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QAMAR+WRDGQ+K +YR L TG+IEEK+ QRQ K +S +++ ++ + S+ +L
Sbjct: 629 QAMARIWRDGQQKKAMIYRMLCTGTIEEKIYQRQLQKNQISESIIEEHLEMGKSLSVEQL 688
Query: 662 RSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILK 721
+F+L NTI DTHD ++C C G + + D L + E+ +DP++
Sbjct: 689 MKIFELNTNTICDTHDLLQCDCCNGGYKTEE--------DTLHLIPKMKEEIKSIDPLIS 740
Query: 722 HCWGAG--VSFVFYQHSTKAEKSK 743
G VS +F +K K
Sbjct: 741 TIEGINKMVSMLFVNEFHNKQKMK 764
>gi|255725568|ref|XP_002547713.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135604|gb|EER35158.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 847
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 236/598 (39%), Positives = 358/598 (59%), Gaps = 53/598 (8%)
Query: 94 VRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQRE 153
V R +RKA++D P+A+ L PP S V V +DP+L+ LR HQ E
Sbjct: 183 VERPTSRKAMYDDN-PSAISLPPPPGTSNF-----------VKVNIDPLLATKLRHHQIE 230
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA---KPLIDKAII 210
GV FMYEC+ G R +GC++ADEMGLGKTL IT +WTLL+Q P KP+I+K ++
Sbjct: 231 GVTFMYECLMGYRDFQGHGCLLADEMGLGKTLMTITTIWTLLKQNPFPEQKKPVINKVLV 290
Query: 211 VAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
V P++L+ NW E KWLG ++ L ++ E + LN +G+ V +LV++Y
Sbjct: 291 VCPATLISNWRQEFKKWLGANKLNVLTLNNAMSDEKRDILN-----FGKLNVYQVLVVNY 345
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
E H L + L++CDEGHRLKN ++ L+ L ++++L+GTPIQN+L+E+
Sbjct: 346 EKITIHYEELSTIKFDLLVCDEGHRLKNSANKVLNHLIKLNIPKKIVLTGTPIQNELIEF 405
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL-EQLIGIVNRCLIR 388
+L+ F+N G+L + F++ Y PI R +D D E + E + +QLIG+ ++ ++R
Sbjct: 406 HTLISFLNPGVLPELKTFQRNYVNPISRARDVNCFDPEVKRRGEEISQQLIGLTSQFILR 465
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELY---TNLIKSDAVRRTMKGGENTKLGMTALS 445
RT ++LSKYL KT+ ++ + +DLQ +L+ TNL K + + G + +
Sbjct: 466 RTQSILSKYLTTKTDILLFVPPSDLQVKLFKYITNLKKFNQINS----------GSDSFT 515
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
I KK+CN P L++D D F I+ + + SGK+ + ++ +
Sbjct: 516 LINLFKKICNSPSLLID------DAF--FKRIVEEKFHLTLSSGKINV-------LIPLL 560
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
L ++ +KIVL+SNYTQTLDL E++ + RLDGS R+K+V+ FN N
Sbjct: 561 LEIVAQ--KEKIVLISNYTQTLDLLEKVLSKINLTFSRLDGSTATNIRSKIVKQFNSNPN 618
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+F+LSSK+GG G+NL+GA+RL++FD DWNPA D Q+M+R+ RDGQ KPCF+YR +TG
Sbjct: 619 IHVFLLSSKSGGMGINLVGASRLILFDNDWNPATDLQSMSRIHRDGQTKPCFIYRIFTTG 678
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCS 682
I+EK+ QRQ K LSS +D + F S+L+++F+++ NTIS+THD ++CS
Sbjct: 679 CIDEKIFQRQLVKNRLSSKFLDNDSSSKSDIFDESDLKNIFEVDTNTISNTHDLLECS 736
>gi|393245087|gb|EJD52598.1| hypothetical protein AURDEDRAFT_181169 [Auricularia delicata
TFB-10046 SS5]
Length = 983
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 246/632 (38%), Positives = 362/632 (57%), Gaps = 47/632 (7%)
Query: 65 NLIRQILA---KPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLS 121
N+ +LA KPF V + ++ YS K VR+ G LH P A A+V+ P +
Sbjct: 247 NIDEPVLASATKPF-VAVASF----YSNKV--VRQSGP---LHSPDAEGAIVMKAPSK-- 294
Query: 122 AHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
H + K+ V VV+DP L+ LRPHQ EGVKF+YECV G+R + +GCI+AD+MG+
Sbjct: 295 DHQAIHNKKNNPVVPVVIDPFLARHLRPHQIEGVKFVYECVMGMRPHEGFGCILADDMGM 354
Query: 182 GKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GKTLQ ITL+WTL++Q A P + K ++V P +L+ NW E KWLG + I
Sbjct: 355 GKTLQTITLVWTLIKQNMYANQGPAVGKVMVVCPVTLINNWAKEFKKWLGRDRVGVFIGD 414
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH--KNEVGLVLCDEGHRLKN 297
KA I +NS +L+I YE R+ + L +GL++CDEGHRLK+
Sbjct: 415 KDKANIKQFINSRAN---------VLIIGYEKLRTVIADLAYCSPPIGLIVCDEGHRLKS 465
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+++ + L+ KRRV+LSGTPIQNDL E+ ++ F N G+L F++ YE+PIL+
Sbjct: 466 ANNKSNKMFEALRTKRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYSTFKRIYESPILK 525
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
+ + E + R +L I ++RR +++L+ YLP K E V + T+LQ E+
Sbjct: 526 SRAPDRTKKELEEGEARSARLHAIAKSFVLRREASILNNYLPPKHEYTVFVTPTELQHEM 585
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG-FENAMN 476
++ L+ + R +G L + I +L KL P L+ K +D A+
Sbjct: 586 FSRLLLERHINRLSRGSTANVLAL-----IRTLTKLSTTPMLLKAKEDAASDDPISEAIT 640
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
++P A + +S KL +L +L +++ T++K+++VS++T TLD+ E K
Sbjct: 641 LIPEKTAVDD------MTVSGKLSILSKILTILRKETEEKVIIVSHFTSTLDVIESYCKK 694
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPD 594
+ Y Y RLDG KR + V+ FN+TS + F+F+LS+KAGG GLNL+GA+RLV+ D D
Sbjct: 695 QRYGYFRLDGQTQTSKRQEYVDNFNRTSQKQHFVFLLSTKAGGVGLNLVGASRLVLVDSD 754
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV-----VDCE 649
WNP++D QAMAR+ RDGQK+P F+YR +STG+I+EK+ QRQ K LS + V
Sbjct: 755 WNPSHDLQAMARIHRDGQKRPVFIYRLISTGTIDEKIFQRQVTKLGLSDSLMKQGQVGNS 814
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+ FS ELR LF + T THD + C
Sbjct: 815 TSKSDSFSPQELRDLFTVHNTTTCHTHDLLDC 846
>gi|393217524|gb|EJD03013.1| hypothetical protein FOMMEDRAFT_123160 [Fomitiporia mediterranea
MF3/22]
Length = 1026
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 245/603 (40%), Positives = 348/603 (57%), Gaps = 40/603 (6%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP A A+V+ P + H K + + VVVDP+L+ LRPHQ+EGVKFMYECV
Sbjct: 318 LHDPLAEGAVVMKEPTK--EHQRKFNLKGRPVIPVVVDPILARHLRPHQKEGVKFMYECV 375
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWC 221
G+R + GCI+ADEMG+GKTLQ ITL+WTLL+Q A P + K +IV P +L+ NW
Sbjct: 376 MGLRKHEGQGCILADEMGMGKTLQTITLVWTLLKQNCYAGTPAVGKVMIVCPVTLIANWK 435
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
E KWLG + +K + +NS ++ +L+I YE R+ S L
Sbjct: 436 KEFHKWLGKDRLGIFTGDKNKEAVKQFINS--------KIHQVLIIGYEKLRTVISELAY 487
Query: 282 --NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+GL++CDEGHRLK+ ++T L RR++LSGTPIQNDL E+ ++ F N G
Sbjct: 488 CLPPIGLIICDEGHRLKSSNNKTSTMFEALSTPRRIILSGTPIQNDLSEFHAMADFCNPG 547
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+L FRK +E IL+ + S ER R QL + ++RR +++L+ YLP
Sbjct: 548 LLDDYSIFRKVFENAILKSRTPDCSAKEREIGEGRQAQLQTVARSFVLRREASILTNYLP 607
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K E VV + + LQ++++ +++ D + + G L M L L KL N P L
Sbjct: 608 PKYEYVVFVTPSPLQRQMFVKILQPDTLATVLHGSMARSLAMIQL-----LTKLSNSPIL 662
Query: 460 VM-------DKIQTGA-DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
+ DK ++ A + F+ A+ +LP A + LS KL L +LA ++
Sbjct: 663 LKAALEKREDKAESDAHEAFDEAVKLLPECARAQDPA------LSGKLQALSNLLAYLRK 716
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIF 569
TD+K +LVS+YT TLD+ E K + Y ++RLDG + KR + V+ FNK S F+F
Sbjct: 717 ETDEKCILVSHYTSTLDVIEEFCKEKKYTFLRLDGQTPVAKRQEYVDRFNKAPQSGAFLF 776
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LS+KAGG GLNLIGA+RL + D DWNP++D Q+MAR+ RDGQK+P F+YR L+ G+I+E
Sbjct: 777 LLSAKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMARIHRDGQKRPVFIYRLLTAGTIDE 836
Query: 630 KMMQRQAHKKALSSCVV-----DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
K+ QRQ K ALS+ ++ D + F+ ELR LF ++T THD I C C
Sbjct: 837 KIYQRQITKLALSASLMGKDAPDSGSSKSDSFTQKELRDLFTFYQHTSCHTHDLIGCP-C 895
Query: 685 VNG 687
G
Sbjct: 896 TRG 898
>gi|395328851|gb|EJF61241.1| hypothetical protein DICSQDRAFT_106351 [Dichomitus squalens
LYAD-421 SS1]
Length = 1088
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/630 (39%), Positives = 355/630 (56%), Gaps = 51/630 (8%)
Query: 72 AKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKD 131
AK F +P ++ G G K G LHDP AP A+V+ P S K +K
Sbjct: 328 AKKF-IPPSSFYGTGSKPKPKG--------PLHDPDAPGAVVMKAP---SKEHQAKFNKK 375
Query: 132 KIQV-HVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
K+ V VV+DP+L+ LRPHQ+EGV+F+YECV G+R + GCI+ADEMG+GKTLQ ITL
Sbjct: 376 KLHVLPVVIDPILARHLRPHQKEGVQFLYECVMGLRKHEGQGCILADEMGMGKTLQTITL 435
Query: 191 MWTLLRQGPLAKP--LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNK 248
+WTLL+Q P A ++ K +IV P SL+ NW E KWLG + K I
Sbjct: 436 VWTLLKQNPYAGAGSVVGKVLIVCPVSLINNWKTEFHKWLGRDRIGIFTGDKDKNTIKQF 495
Query: 249 LNSFMQTYGRRPVNPILVISYETFRSHASVLH--KNEVGLVLCDEGHRLKNCESQTYQAL 306
LNS + +L+I YE R+ S L + +GL++CDEGHRLK+ ++T
Sbjct: 496 LNS--------KTHQVLIIGYERLRTVISDLAYCQPPIGLIICDEGHRLKSANNKTSTMF 547
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L+ RRV+LSGTPIQN+L E+ ++ F N G+L F++ YETPIL+ + S
Sbjct: 548 DALRTPRRVILSGTPIQNELSEFHAMADFCNPGLLDDYSTFKRVYETPILKSRAPGCSAK 607
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
E R QL I ++RR + +L KYLP K E VV + T LQ ++ ++ D
Sbjct: 608 EAELGEARSAQLSTIARSFVLRRDATILKKYLPPKHEYVVFVTPTKLQLSIFEKILSHDK 667
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHP-------DLVMDKIQTGAD----GFENAM 475
+ ++ L + I L K+ N P D K Q GAD E A+
Sbjct: 668 LDSLVRNSTAESLAL-----INILTKISNSPILLKATADQAKLKGQEGADVKRNAIEEAL 722
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
+LP ++ + LS KL L T+L ++ T++K ++VS+YT TL++ E K
Sbjct: 723 QLLPE------RAQIEDVSLSGKLSALATLLRALRKHTEEKCIIVSHYTSTLNIIEAYCK 776
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ Y Y RLDG+ KR + V FN++S FIF+LSSKAGG GLNLIGA+RL + D
Sbjct: 777 TKSYTYHRLDGNTPAPKRQEYVNDFNRSSQAKRFIFLLSSKAGGVGLNLIGASRLCLIDS 836
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV--DCEED 651
DWNP++D Q+MAR+ RDGQK+P ++YRFL+TG+I+EK+ QRQ K LS ++ E
Sbjct: 837 DWNPSHDLQSMARIHRDGQKRPVYIYRFLTTGAIDEKIYQRQVTKLGLSDSLMGTGSSES 896
Query: 652 VARHFSMSELRSLFQLEENTISDTHDKIKC 681
+ F+ +L +F + +T +THD + C
Sbjct: 897 KSDSFTRKDLLDIFTIHPHTACNTHDLLDC 926
>gi|159131635|gb|EDP56748.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus fumigatus
A1163]
Length = 969
Score = 430 bits (1105), Expect = e-117, Method: Compositional matrix adjust.
Identities = 253/584 (43%), Positives = 349/584 (59%), Gaps = 33/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P ALV+ P + K K V VVVDP+LS LR HQREGV+F+YECV
Sbjct: 251 HDPNQPGALVMKRPDS--------VPKGKQIVDVVVDPILSKHLRQHQREGVQFLYECVM 302
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P+I KA+IV P +L+ NW
Sbjct: 303 GMRSFNGEGAILADDMGLGKTLQTITLLWTLLKQNPIHESPPVIKKALIVCPVTLINNWR 362
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D K +L F T GR ++++ YE R+ L
Sbjct: 363 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TMGR--AYSVMIVGYEKLRTVQEGLA 413
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +++ DEGHRLK ++++ QA+ L A +R++LSGTPIQNDL E+F+ V VN G
Sbjct: 414 RGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATKRIILSGTPIQNDLKEFFAAVDLVNPG 473
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILG + F +++E PI++ + A+ E K R E+L + ++ ++RRT +L+KYLP
Sbjct: 474 ILGNFKAFVREFEGPIVKSRQPEATKKEIEKGEARNEELRELTSKFMLRRTVDILAKYLP 533
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ T Q +Y N++ S + + EN AL IT LKKLCN P L
Sbjct: 534 PKTEYVLFCNPTSTQATIYKNVLASPVFQCAIGNSEN------ALQLITILKKLCNSPSL 587
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K TG + + L SAK+ +LD +L ++ +T +KIVL
Sbjct: 588 LSPK--TGDERPSETITAL-LSSLPPNLLRHFTPSCSAKIRLLDQLLHNLRTSTSEKIVL 644
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS +KR +VE FN+ F F+LS+KAGG
Sbjct: 645 VSNYTSTLNLLANLLNSLSLPFLRLDGSTPAQKRQALVEDFNRLPPNRCFAFLLSAKAGG 704
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 705 TGLNLIGASRLVLFDVDWNPATDVQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 764
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V++ + VA+ FS EL+ LF+L+E + TH+ + C
Sbjct: 765 KIGLADSVMEHKNSVAQ-FSRDELKDLFRLDEASRCQTHELLGC 807
>gi|255930267|ref|XP_002556693.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211581306|emb|CAP79077.1| Pc06g00840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 978
Score = 429 bits (1104), Expect = e-117, Method: Compositional matrix adjust.
Identities = 261/598 (43%), Positives = 359/598 (60%), Gaps = 40/598 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP A ALV+ P + K + V VVVDP+L+ LRPHQREGVKF+YECV
Sbjct: 248 HDPKAVGALVMPRPKS--------VPKGRQVVDVVVDPLLAKNLRPHQREGVKFLYECVM 299
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ I L+WTLL+Q P+ A P+I KA+IV P +L+ NW
Sbjct: 300 GMRSFNGEGAILADDMGLGKTLQTIALLWTLLKQNPVFEAPPVIKKALIVCPVTLINNWR 359
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D SK +L F T GR I+++ YE R+ ++
Sbjct: 360 KEFRKWLGNERIGVFVFDDKSK-----RLTDF--TKGR--AYSIMIVGYEKLRTVQEALA 410
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ + V +++ DEGHRLK ++++ A+ L A +RV+LSGTPIQNDL E+F+ V VN G
Sbjct: 411 NSSGVDIIIADEGHRLKTLQNKSGLAIQSLSAVKRVILSGTPIQNDLREFFAAVDLVNPG 470
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILG+ + F +++ETPI+R + A+ + K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 471 ILGSFKSFIREFETPIVRSRQPEATSKDIEKGESRGEELRELTSQFMLRRTADILAKYLP 530
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q +Y ++ S + M E +AL IT LKKL N P L
Sbjct: 531 PKTEYVLFCKPTRPQANIYKAVLASPIFQSAMGNAE------SALQLITILKKLSNSPSL 584
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSG---KLLIELSAKLMVLDTMLAVIKMTTDDK 516
+ A ++ N T AS L SAK+ VLD +L ++ TD+K
Sbjct: 585 LT------AKNNDDTPNETMTALIASIPQPLHRHLSPSSSAKIRVLDQLLDTMRSKTDEK 638
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSK 574
IVLVSNYT TL L L G Y+RLDGS +KR +V+ FN+ S+ F F+LS+K
Sbjct: 639 IVLVSNYTSTLSLLATLLTSLGLPYLRLDGSTPAQKRQGLVDDFNRLPASSCFAFLLSAK 698
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+PC +YR L GS+EEK+ QR
Sbjct: 699 AGGTGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRPCRIYRILLKGSLEEKIWQR 758
Query: 635 QAHKKALSSCVVD--CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQV 690
Q K L+ V+ + FS++ELR LF+L+E+ TH+ + C G+Q
Sbjct: 759 QVTKLGLADSVMQEKSSSNGGAQFSVAELRDLFRLDEDRACQTHELLGCHCGGRGVQA 816
>gi|407919440|gb|EKG12686.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 931
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/592 (41%), Positives = 351/592 (59%), Gaps = 40/592 (6%)
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
A + HDP AP ALV+ P ++ + K K V VVVDPVLS LR HQR+GV+F+
Sbjct: 236 APQPRHDPNAPRALVMTRPLPMN------VPKGKQIVDVVVDPVLSKHLRDHQRQGVQFL 289
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--KPLIDKAIIVAPSSL 216
YECV G+ + G I+ADEMGLGKTLQ ITL+WTLL+Q P+ P++ KAIIV P+ +
Sbjct: 290 YECVMGMGAYNGQGVILADEMGLGKTLQTITLVWTLLKQNPIYDDPPVVKKAIIVCPAGV 349
Query: 217 VKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETF-RS 274
V NW E KWLG R+ D K D + R +++I YE +S
Sbjct: 350 VSNWRREFRKWLGNERLGVFVADESRKRLTD---------FTRGKCYSVMIIGYEKLLKS 400
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
H + + +V LV+ DEGH+LK + +T QA+ L R VLLSGTP N+LLE+ ++
Sbjct: 401 HEDIKSQCDVDLVVLDEGHKLKTAKGKTAQAIRNLGTDRVVLLSGTPFSNNLLEFHAVAD 460
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
VN G+LG F++++E PI++GQ A+ +ER K R E+L + + ++RRT+ +L
Sbjct: 461 LVNPGVLGKLNAFKREFEGPIVKGQQPDATCSEREKGAARHEELDKLSKQFMLRRTADIL 520
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
SKYLP KTE V+ + T Q E+Y ++ S A + +N AL I LK++C
Sbjct: 521 SKYLPSKTEHVLLCRPTTAQAEVYRRVLASPAFGAALGSNDN------ALQLINVLKQVC 574
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAASYKS--GKLLIE-LSAKLMVLDTMLAVIKM 511
N P L+ + N AA ++ KLL SAK VLD++L I
Sbjct: 575 NSPKLL---------SYAKNENTPSPTIAAILENIPAKLLNSGASAKFQVLDSLLHRIHT 625
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIF 569
TT++K+V+VS+YT TLD+ L Y ++R+DGS KR +++ FN + + F F
Sbjct: 626 TTNEKVVIVSHYTSTLDILGGLLTSLSYTFLRVDGSTPANKRQEMINKFNNSDANKHFAF 685
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LS+KAGG G+NL GA+RLV++D DWNPA+D QAMAR+ RDGQK+PC +YR L+ G+++E
Sbjct: 686 LLSAKAGGVGINLTGASRLVLYDIDWNPAHDLQAMARIHRDGQKRPCKIYRLLTMGALDE 745
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K+ QRQ K+ L+ V+D + + F+ EL+ LF L + TH+ I C
Sbjct: 746 KIYQRQVTKQGLADSVIDSKT-SSSSFTKEELQDLFTLNDGHRCQTHELICC 796
>gi|296808475|ref|XP_002844576.1| RAD54B protein [Arthroderma otae CBS 113480]
gi|238844059|gb|EEQ33721.1| RAD54B protein [Arthroderma otae CBS 113480]
Length = 960
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 256/610 (41%), Positives = 358/610 (58%), Gaps = 48/610 (7%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDPT P A+V+ P + K V VVVDP+L LR HQREGVKF+YECV
Sbjct: 272 HDPTLPGAVVMKRPDS--------VPPGKQVVDVVVDPILGKHLREHQREGVKFLYECVM 323
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+ADEMGLGKTLQ I L+WTLL+Q P+ ++P+I KA+IV P +L+ NW
Sbjct: 324 GLRSFNGEGAILADEMGLGKTLQTIALIWTLLKQNPIYGSQPVIKKALIVCPVTLINNWK 383
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG S +L+ F T GR +++I YE RS L
Sbjct: 384 KEFKKWLGSDRIGVFVADGKS-----TRLSDF--TMGRS--YSVMIIGYERLRSVQEQLT 434
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK +++ QA+ L RRV+LSGTPIQN+L E+F++V FVN
Sbjct: 435 KGSAIDIVVADEGHRLKTVQNKCAQAIQSLNTTRRVILSGTPIQNELSEFFAMVDFVNPA 494
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI+ + A K R E+L + + ++RRT+ +LSK+LP
Sbjct: 495 LLGTFKSFMKEFEGPIVGARQPNAPKKVIEKGKARSEELAELTSPFILRRTADILSKHLP 554
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T QK LY +++ S + ++ E +AL IT LKK
Sbjct: 555 PKTEYILFCNPTSAQKNLYRHVLASPLFQSVLRNSE------SALQLITILKK------- 601
Query: 460 VMDKIQTGADGFENAMNI----LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
K++ G + +M+ LP +G S K+ VLD +L ++ T +
Sbjct: 602 --PKLEDDGKGEDTSMSAFISSLPHNLHRCLSAGS-----SGKIRVLDQLLYNLRNKTTE 654
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSS 573
K+VLVSNYT TL+L L ++RLDGS KR +V+ FN++S F F+LS+
Sbjct: 655 KVVLVSNYTSTLNLLANLLTSLDLPFLRLDGSTPATKRQALVDDFNRSSPSACFAFLLSA 714
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGG GLNLIGA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G IEEK+ Q
Sbjct: 715 KAGGTGLNLIGASRLVLFDVDWNPATDLQAMARIHRDGQKRHCHIYRLLLKGGIEEKIWQ 774
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
RQ K L+ V+D + +A HFS EL+ LF+L+E++ TH+ + C G+ K
Sbjct: 775 RQVTKLGLADSVMDQKGGIA-HFSQEELKDLFRLDESSQCQTHELLGCQCGGQGVMSKEV 833
Query: 694 PLESDCTDDL 703
E++ +D++
Sbjct: 834 ENENEPSDEI 843
>gi|440295421|gb|ELP88334.1| DNA repair and recombination protein RDH54, putative [Entamoeba
invadens IP1]
Length = 766
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 247/586 (42%), Positives = 345/586 (58%), Gaps = 52/586 (8%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
AL+D P A V+ DK + V++DP L LRPHQ EG+KFMY C
Sbjct: 173 ALYDKENPFAFVV---------------DDKKEPPVLIDPYLGKHLRPHQVEGIKFMYNC 217
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V +R +D+ GCI+ADEMGLGKTLQ I L+WTL +Q + K ++V P SL+ NW
Sbjct: 218 V--MRGDDS-GCILADEMGLGKTLQTIALIWTLYKQCN-----VKKTVVVCPQSLIGNWE 269
Query: 222 NEITKWLGGRVAALPID-GGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
NE KWLG +P+ G S A + K+ F+ Y P+L+ SYE RSH L
Sbjct: 270 NEFMKWLG--TERIPVKTGSSDALMKQKVEDFINDYI-----PVLITSYEQVRSHVETLK 322
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
K ++GL++CDEGHR+KN ++T +L L A R ++LSGTP+QN L +++SLV F G
Sbjct: 323 KTKIGLLICDEGHRIKNLMTKTNTSLQNLGASRHIILSGTPVQNGLEDFYSLVEFCCPGS 382
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LG + F++ + TPI R QD A+ E ER ++L +N ++RRTS + KYLP
Sbjct: 383 LGPLRTFKRVFATPIQRAQDGDATLEEIELGKERAKELTVKLNDYVLRRTSKINEKYLPD 442
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
KTE VV +K + +QK++Y ++ ++R + AL I KLCNHP LV
Sbjct: 443 KTEIVVFVKPSIVQKKIYAMMLNDLKMKRVDQSA--------ALQFIQLFTKLCNHPLLV 494
Query: 461 MDK-IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
D ++ D + ++IL A +E S K V + I +++K+V+
Sbjct: 495 RDYLVENYKDVDKEILDILNQEVAN--------LEGSNKFNVTVKFIEEIIENSEEKVVV 546
Query: 520 VSNYTQTLDLFERLSKLR---GYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKA 575
VSNYT+TLD+FE+ R K +RLDG + K R +VE N K S + +LSSKA
Sbjct: 547 VSNYTKTLDVFEKYFSTREESKIKILRLDGKTSQKSRDTIVEKINDKKSGYNVLLLSSKA 606
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLNLIG +RL++FDPDWNPA D QAMAR+WRDGQK+ +YR L TG+IEEK+ QRQ
Sbjct: 607 GGVGLNLIGCSRLILFDPDWNPAKDKQAMARIWRDGQKRKAMIYRMLCTGTIEEKIYQRQ 666
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K +S VV+ ++ + S+ +L +F+L ENT+ DTHD ++C
Sbjct: 667 LQKNQVSESVVEEHLEMGKSLSLEQLMKVFELNENTLCDTHDLLQC 712
>gi|392579506|gb|EIW72633.1| hypothetical protein TREMEDRAFT_36825 [Tremella mesenterica DSM
1558]
Length = 1048
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 246/631 (38%), Positives = 375/631 (59%), Gaps = 78/631 (12%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQV-HVVVDPVLSNILRPHQREGVK---- 156
ALHDP AP A+V+ PP L +K++ + ++ VV+DP+L++I+RPHQ EGVK
Sbjct: 283 ALHDPGAPGAVVMPRPPDL----WVKLNHSRTEIIDVVLDPLLTSIMRPHQHEGVKASRR 338
Query: 157 ----------FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP--L 204
FMY+CV G+ +A GCI+ADEMGLGKTLQ I L++T+L+Q P A +
Sbjct: 339 YTGRYLANRQFMYKCVMGMSGAEAEGCILADEMGLGKTLQTIGLIYTMLKQSPFANQGHI 398
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
K +IV P +LV NW E KWL +V + DG D ++++F++
Sbjct: 399 AQKILIVCPVTLVSNWRKEFKKWLQNKVGVVAADGS-----DWQISNFLR---------- 443
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
+ + AS + + L++CDEGHRLK+ +++T + L+ RR++LSGTP+QN
Sbjct: 444 -----KVIKQLASC--QPPIELIVCDEGHRLKSKDNKTTKMFEALRTSRRIILSGTPVQN 496
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL EY+++V+F GILGT F K+YE ILR + AS AE E+ +L + +
Sbjct: 497 DLGEYWAMVNFTCPGILGTYPSFNKRYEKKILRSRMPGASKAEVENGMEQAAELSKLSEK 556
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
++RRT+ +LS YLP + + V+ + LQ E+++ L+ + ++ G GM +L
Sbjct: 557 FVLRRTADVLSNYLPPRHDYVIFVAPATLQLEVFSRLLNPSLLGNFLRAGS----GMMSL 612
Query: 445 SSITSLKKLCNHPDLV---------MDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
+ I SL+K+ N P L+ +D+I TG E A+ I+P + + ++
Sbjct: 613 ALIDSLRKVSNSPSLLRKKDEESIPLDEIGTGR---EEALKIIPKDTSV------VDLDS 663
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S KL+VL +L ++ + +K+V+VSN+T TLD E + K++ Y ++RLDG K R
Sbjct: 664 SGKLIVLVRLLQSLRGASGEKVVVVSNWTSTLDFIEGMCKVKSYSFLRLDGKTPTKTRQT 723
Query: 556 VVETFNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
+VE FN+ S + F+F+LS+KAGG GLNLIGA+RLV+FD DWNP+ D QAM R+ RDGQK
Sbjct: 724 LVEQFNRGSQLDSFVFLLSAKAGGVGLNLIGASRLVLFDSDWNPSTDRQAMGRIHRDGQK 783
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR---HFSMSELRSLFQLEEN 670
KP ++YRFL+ +I+EK+ QRQ K LS ++D + + F+++ELR +F L N
Sbjct: 784 KPVYIYRFLTACTIDEKIYQRQITKDGLSDQMLDGGQATGQTKDSFTLAELRDIFTL--N 841
Query: 671 TISD---THDKIKCSRCVNGIQVKPPPLESD 698
T++D THD + C C + + P L +D
Sbjct: 842 TLTDGCQTHDLLGCD-CAD--KTAPADLAAD 869
>gi|312376441|gb|EFR23522.1| hypothetical protein AND_12719 [Anopheles darlingi]
Length = 875
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 250/567 (44%), Positives = 342/567 (60%), Gaps = 33/567 (5%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA----YGCIMADEMGLGKTLQCITLMW 192
V V L+ LRPHQR+GV F+YECVTG+R+ + YG I+ADEMGLGKTLQCI+LM+
Sbjct: 242 VQVPACLARHLRPHQRDGVAFLYECVTGMRMMEPPGGYYGAILADEMGLGKTLQCISLMY 301
Query: 193 TLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSF 252
TLL+ GP KPL + +IV PSSLV+NW EITKWL I G NKL +
Sbjct: 302 TLLKTGPYGKPLARRILIVTPSSLVENWDREITKWLRNERLFTFIVGPH-----NKLRLY 356
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
Q+ P+L+ISYE L + L+ CDEGHRLKN + + L L+ +
Sbjct: 357 AQSLHI----PVLIISYEMLAKQIDELETVKFDLIFCDEGHRLKNSNVKVFGVLSKLECR 412
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RRVL++GTPIQNDL E++SL++FVN G+LG+ Q+F+ +YETPI+ Q
Sbjct: 413 RRVLITGTPIQNDLAEFYSLINFVNPGLLGSYQDFKARYETPIIISQRPGVLPQSIELGI 472
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
ERL +L I R ++RRT ++++YLP K E V+ ++LQ +L + R+
Sbjct: 473 ERLNELNVITGRFVLRRTQEVINRYLPEKHELVIFCHPSELQTQLLRTALTFYEEERS-- 530
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G N +T L IT LKK+CNHP LV K+ TG E+ ++ L G
Sbjct: 531 -GSN---AITPLQLITILKKICNHPSLV--KV-TGRGDPESLLHRLADQLPDWQAMGP-- 581
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
SAKL ++DT+L + + +K+V+VS Y +TLD+ L + YK+ RLDGS
Sbjct: 582 -SDSAKLAIVDTLLEDL-IVKQEKVVIVSYYNKTLDMIAGLCEHYNYKHSRLDGSTVASD 639
Query: 553 RAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R+K+V TFN +++ FI +LS+KAGG GLNLIGA+RLV++D DWNPAND QAM+RVWRDG
Sbjct: 640 RSKIVATFNNAASDIFILLLSAKAGGAGLNLIGASRLVLYDNDWNPANDLQAMSRVWRDG 699
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEEN 670
Q + F+YR L+ SIEE++ QRQ K +LS VVD + ++ FS EL+ LF +
Sbjct: 700 QTRTVFIYRLLTAFSIEERIFQRQISKTSLSGTVVDQKRNMNNLQFSDEELKDLFSFVDP 759
Query: 671 TISD---THDKIKCSRCVNGIQVKPPP 694
++ TH ++C C GI P P
Sbjct: 760 QHANDCLTHSLLECP-CA-GIGTIPEP 784
>gi|392568778|gb|EIW61952.1| hypothetical protein TRAVEDRAFT_57102 [Trametes versicolor
FP-101664 SS1]
Length = 1083
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/620 (40%), Positives = 350/620 (56%), Gaps = 40/620 (6%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LH P AP A+V+ P + H K+ V VV+DPV++ LRPHQREGV+F+YECV
Sbjct: 352 LHSPDAPGAVVMKAPSR--EHQAKFNKKNLPVVPVVIDPVIARHLRPHQREGVQFLYECV 409
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNW 220
G+R + G I+ADEMG+GKTLQ I L+WTLL+Q P A P++ K +IV P SL+ NW
Sbjct: 410 MGLRKHEGQGSILADEMGMGKTLQTIALVWTLLKQNPYAGAGPVVGKVLIVCPVSLINNW 469
Query: 221 CNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
NE KWLG + + +K+ I LNS ++ +LVI YE R+ L
Sbjct: 470 KNEFHKWLGKDRVGVFVGDKNKSTIKQFLNSR--------IHQVLVIGYERLRTVIDDLA 521
Query: 281 --KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+GL++CDEGHRLK+ ++T L+ RRV+LSGTPIQN+L E+ ++ F N
Sbjct: 522 YCNPPIGLIVCDEGHRLKSANNKTSTMFEALRTPRRVILSGTPIQNELSEFHAMADFCNP 581
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+L F++ YETPIL+ + S E R QL I ++RR + +L KYL
Sbjct: 582 GLLDDYSTFKRVYETPILKSRAPGCSSKEAELGEARSAQLTAIAKSFVLRREATMLKKYL 641
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP- 457
P K E VV I T LQ ++ ++ SD + ++ L + I L K+ N P
Sbjct: 642 PAKHEYVVFITPTKLQLAIFEKILSSDKLDNLVRSSTAESLAL-----INMLTKISNSPI 696
Query: 458 ------DLVMDKIQTGAD-----GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
D K Q G D E+A+ +LP+G + LS KL L T+L
Sbjct: 697 LLKATADQARLKAQQGGDVVKRNAIEDALKLLPSGAQIED------VALSGKLSALATLL 750
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN- 565
+ T++K ++VS+YT TL++ E K + Y Y RLDGS KR V FN++S
Sbjct: 751 RALHKHTEEKCIIVSHYTSTLNIIEAYCKKKSYTYHRLDGSTPAAKRQDYVNDFNRSSQA 810
Query: 566 -EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
F+F+LSSKAGG GLNLIGA+RL + D DWNP++D Q+MAR+ RDGQK+P ++YRFL+T
Sbjct: 811 KRFVFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMARIHRDGQKRPVYIYRFLTT 870
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
GSI+EK+ QRQ K LS E + F+ +L +F + +T +THD + C C
Sbjct: 871 GSIDEKIYQRQVTKLGLSDLSQGSSESKSDSFTRKDLLDIFTINPHTACNTHDLLDCP-C 929
Query: 685 VNGIQVKPPPLESDCTDDLS 704
+ +P P+ + D+ S
Sbjct: 930 EASDEAEPKPITREEMDEAS 949
>gi|168048890|ref|XP_001776898.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
gi|162671754|gb|EDQ58301.1| SNF2 family DNA-dependent ATPase [Physcomitrella patens subsp.
patens]
Length = 1122
Score = 427 bits (1098), Expect = e-116, Method: Compositional matrix adjust.
Identities = 257/680 (37%), Positives = 373/680 (54%), Gaps = 96/680 (14%)
Query: 124 DLLKIDKDK-IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLG 182
D K+++D +V VVVDP +++ LRPHQ++GV FMYEC+ G+R GC++ADEMGLG
Sbjct: 455 DAWKLNEDSSTEVPVVVDPYIASKLRPHQKDGVMFMYECIMGLRSNSFCGCLLADEMGLG 514
Query: 183 KTLQCITLMWTLLRQ-----------------------------------GPLAKPLIDK 207
KTLQ ITL+WT+L+Q GP P + +
Sbjct: 515 KTLQVITLIWTILKQHTLFVLLDLSNEDVSSVICKRMKLYMTVGVDFHSQGPGGSPAVKR 574
Query: 208 AIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKA-EIDNKLNSFMQTYGRRPVNPIL 265
++V PSSLV NW NE+ KWLG R+ + + G+ E K F + +P+L
Sbjct: 575 VLVVCPSSLVHNWGNEVHKWLGRERLRFMAVHAGTAYREAAQKFADFKAGFS----SPLL 630
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE-SQTYQALMGLKAKRRVLLSGTPIQN 324
+ SYE R H ++ + GL++CDE HRLKNC ++T AL+GL+ R++LL+GTP+QN
Sbjct: 631 ITSYEILRKHIDIIASTKPGLLVCDEAHRLKNCAGNKTIDALVGLQCPRKILLTGTPVQN 690
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL E+++++ F N G+LG F++ + PI R QD AS+ E+ R +L
Sbjct: 691 DLNEFYAMIDFANPGLLGPLSSFKRIFAEPIERSQDRTASEEEQKLGQARSLELQSRTEF 750
Query: 385 CLIRRTSALLSKYLPVKTEQV---VCIKMTDLQKELYTNLIKSDA--VRRTMKGGENTKL 439
C++RRT+ + YLP KTE V + K + + + + R++ EN +
Sbjct: 751 CILRRTANINEAYLPTKTEVVARKILFKHEGITGWHHCPMSPKEGSMALRSVYMTEN--V 808
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTG-------------------ADGFENAMNILPT 480
T LSSITSL+KLC+HP L + I G +D +N + +L +
Sbjct: 809 SATILSSITSLRKLCSHPQLSYNDIIEGTNLDAELKSQIIAAGLSRFSDSTDN-IEVLQS 867
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
+ S + K +L+ +L T+ D++V+VSN+T+TLDL + + +G+
Sbjct: 868 RASLSDEGWKFSGKLACLYWLLRTVYTSRTARQKDRVVVVSNFTRTLDLIQDMCTSQGWN 927
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
++RLDGS KR +V+ N + F+F+LSSKAGG GLNLIGANRLV+FDPDWNPA
Sbjct: 928 WLRLDGSTEASKRQLLVDQLNSGVGDVFVFLLSSKAGGTGLNLIGANRLVLFDPDWNPAT 987
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV---VDC---EEDVA 653
D QA+AR+WR+GQ KP +YR LSTGSIEEK+ QRQ K +S+ V D + ++
Sbjct: 988 DSQAIARIWREGQLKPVLIYRLLSTGSIEEKIYQRQIMKGGMSAAVEGDADVHTKKSNIG 1047
Query: 654 RHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKR 713
RHFS EL+ LF L T DT D I + K P ++ W +E
Sbjct: 1048 RHFSKEELKELFTLNLATNCDTFDLIS--------RTKTAPAKT--------WMDDSEN- 1090
Query: 714 WLVDPILKHCWGAG-VSFVF 732
+ DP L+ +G VSFV+
Sbjct: 1091 -VDDPALQSAIKSGIVSFVY 1109
>gi|168051804|ref|XP_001778343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670320|gb|EDQ56891.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 921
Score = 426 bits (1094), Expect = e-116, Method: Compositional matrix adjust.
Identities = 249/589 (42%), Positives = 330/589 (56%), Gaps = 105/589 (17%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVR--------IEDAYGCIMADEMGLGKTLQCI 188
++VDP L+ LR HQREGV+FM+ECV G+R + GCI+AD+MGLGKTLQ I
Sbjct: 188 IIVDPHLTKFLRQHQREGVQFMFECVAGLRGMAISKDEKATSGGCILADDMGLGKTLQSI 247
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDN 247
TLMWTLL+QG +P+ + +I+ P+SLV NW EITKWL V L + +++++
Sbjct: 248 TLMWTLLKQGFDGRPMATRVVIITPTSLVSNWEQEITKWLSHSTVNVLAMCESTRSDVLQ 307
Query: 248 KLNSFMQTYGRRPVN--PILVISYETFRSHASVLHK-NEVGLVLCDEGHRLKNCESQTYQ 304
+++F+ P N +L+ISYETFR HA+ K L++CDE HRLKN ++ T Q
Sbjct: 308 GISTFLS-----PQNFYQVLIISYETFRMHAARFEKEGSCDLLICDEAHRLKNDKTLTNQ 362
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL L RRVLLSGTP+QNDL E++++V+F N G+LG A FRK YE PIL G++ A+
Sbjct: 363 ALASLPCFRRVLLSGTPMQNDLEEFYAMVNFTNPGVLGNASTFRKYYENPILTGREPDAT 422
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
D R + ER +L VN+ ++RRT+ALLS +LP K +VVC K+T+LQ LY + I+S
Sbjct: 423 DEARAISIERSAELSEKVNQFILRRTNALLSNHLPPKIVEVVCCKLTELQTSLYRHFIRS 482
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG---ADGFENAMNILPTG 481
VR+ + E+ L+SIT+LKKLCNHP L+ D I+ G A GF + + + P
Sbjct: 483 KNVRQAL---EDQTKRAKVLASITALKKLCNHPKLIYDTIRAGGSEAAGFGDCLKLFPPH 539
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
TLDLF ++ + R Y +
Sbjct: 540 L-------------------------------------------TLDLFAQICRERNYPF 556
Query: 542 VRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
VRLDG+ +I KR K+V FN NEF F+LSSKAGGCGLNLIG NRLV+FDPDWNPA D
Sbjct: 557 VRLDGTTSIGKRQKLVSRFNDPNQNEFAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPATD 616
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV-----ARH 655
Q + QRQ K+ L VVD E+
Sbjct: 617 KQ----------------------------VFQRQMSKEGLQK-VVDKEQSTDAKAQVNM 647
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
S +LR LF L E+ SDTHD I C RC + P E T D+S
Sbjct: 648 LSTDDLRDLFTLREDVRSDTHDSISCERC----DAEGGPGEMTSTSDIS 692
>gi|150865881|ref|XP_001385272.2| helicase [Scheffersomyces stipitis CBS 6054]
gi|149387137|gb|ABN67243.2| helicase [Scheffersomyces stipitis CBS 6054]
Length = 809
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 243/606 (40%), Positives = 357/606 (58%), Gaps = 46/606 (7%)
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
A+ L PP ++ ++L V V++DP LS LRPHQ EGVKF+YEC+ G R +
Sbjct: 147 AIALPRPPGVNENEL---------VDVLIDPHLSVKLRPHQVEGVKFVYECLMGFRGNNG 197
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAK---PLIDKAIIVAPSSLVKNWCNEITKW 227
GC++ADEMGLGKTL IT++WTL RQ P K I K +I P SL+ NW +E KW
Sbjct: 198 KGCLLADEMGLGKTLMTITVIWTLCRQNPFIKQPRSTIHKVLICCPVSLINNWKDEFKKW 257
Query: 228 LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
LG ++ GG+ + D + + ++G V +L+++YE ++ L K L+
Sbjct: 258 LGMNKLSILTLGGNVSSNDRQ---DLVSFGNLNVYQVLIMNYEKVTTYHQELSKIRFDLL 314
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDEGHRLK+ ++ L R++LL+GTPIQNDL+EY+++++F+N GILG + F
Sbjct: 315 VCDEGHRLKSSSNKVMNHLTSFNIPRKILLTGTPIQNDLVEYYTIINFINPGILGDFKSF 374
Query: 348 RKQYETPILRGQD-SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
+K + PI R +D +C + + E +LI I + +RRT +LL YL KT+ ++
Sbjct: 375 QKSFINPITRSRDVTCFDPVVKEQGLEISNKLIDITKQFTLRRTQSLLLNYLTEKTDVIL 434
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
TDLQK L++ +I + M +T A + I KKLCN P L+++
Sbjct: 435 YAPPTDLQKRLFSYIINLKSFNELMNDSASTT--TQAFTLINLFKKLCNSPSLLLE---- 488
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIEL---------SAKLMVLDTMLAVIKMTTDDKI 517
D F ++ K K IEL S K+ +L +L I + ++KI
Sbjct: 489 --DNF----------FSKLIKGEKEEIELLNKNTLTTSSGKINILIPLLLEI-TSFNEKI 535
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGG 577
VLVSNYT+TLDL E + K ++RLDGS R K+V FNK SN +F+LSSK+GG
Sbjct: 536 VLVSNYTKTLDLLEAVLKKLDLSFLRLDGSTAKNLRNKLVNQFNK-SNINVFLLSSKSGG 594
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNL+GA+RL++FD DWNP+ D Q+M+R+ RDGQ +PCF+YR L+TG+I+EK+ QRQ
Sbjct: 595 MGLNLVGASRLILFDNDWNPSVDLQSMSRIHRDGQTRPCFIYRILTTGTIDEKIFQRQLM 654
Query: 638 KKALSSCVVDCE-EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
K LSS +D E + + F +L++LF++EENTIS+THD ++C +G + +
Sbjct: 655 KSKLSSKFLDNESQSTSDVFDYRDLKNLFEIEENTISNTHDLLECECTGDGHNISVSLTD 714
Query: 697 SDCTDD 702
S+ D
Sbjct: 715 SESDSD 720
>gi|425775549|gb|EKV13810.1| DsDNA-dependent ATPase (Rad54b), putative [Penicillium digitatum
PHI26]
gi|425783707|gb|EKV21537.1| DsDNA-dependent ATPase (Rad54b), putative [Penicillium digitatum Pd1]
Length = 1502
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 263/595 (44%), Positives = 359/595 (60%), Gaps = 36/595 (6%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP A ALV+ P + K + V VVVDP+L+ LRPHQREGVKF+YECV
Sbjct: 770 HDPKAVGALVMPRPKS--------VPKGRQVVDVVVDPLLAKNLRPHQREGVKFLYECVM 821
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ I L+WTLL+Q P+ A P+I KA+IV P +L+ NW
Sbjct: 822 GMRPFNGEGAILADDMGLGKTLQTIALLWTLLKQNPVFEAPPVIKKALIVCPVTLINNWR 881
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-HASVL 279
E KWLG R+ D SK +L F T GR I+++ YE R+ ++
Sbjct: 882 KEFRKWLGSERIGVFVFDDKSK-----RLTDF--TKGR--AYSIMIVGYEKLRTVQEALA 932
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ + V +++ DEGHRLK ++++ QA+ L A +RV+LSGTPIQNDL E+F+ V VN G
Sbjct: 933 NSSGVDIIIADEGHRLKTLQNKSGQAIQSLSAVKRVILSGTPIQNDLREFFAAVDLVNPG 992
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
ILG + F +++ETPI+R + A+ E K R E+L + ++ ++RRT+ +L+KYLP
Sbjct: 993 ILGNFKSFIREFETPIVRSRQPEATRKEIEKGESRGEELRELTSKFMLRRTADILAKYLP 1052
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE V+ K T Q +Y ++ S + M E +AL IT LKKL N P L
Sbjct: 1053 PKTEYVLFCKPTRPQANIYKAVLTSPIFQTAMGNAE------SALQLITILKKLSNSPSL 1106
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ K D M+ L L SAK+ VLD +L ++ TD+KIVL
Sbjct: 1107 LTAK--NNDDTPNETMSALIESIPQPLHR-HLSPSSSAKIRVLDQLLDTMRNKTDEKIVL 1163
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGG 577
VSNYT TL L L G Y+RLDGS +KR +V+ FN+ S+ F F+LS+KAGG
Sbjct: 1164 VSNYTSTLSLLATLLTSLGLPYLRLDGSTPAQKRQGLVDDFNRLPASSCFAFLLSAKAGG 1223
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+PC +YR L GS+EEK+ QRQ
Sbjct: 1224 TGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRPCRIYRVLLKGSLEEKIWQRQVT 1283
Query: 638 KKALSSCVVDCEEDVAR---HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
K L+ V+ E++ + FS +ELR LF+L+E+ TH+ + C G+Q
Sbjct: 1284 KLGLADSVMQ-EKNTSNGGAQFSAAELRDLFRLDEDRACQTHELLGCRCSGRGVQ 1337
>gi|169767388|ref|XP_001818165.1| DNA-dependent ATPase [Aspergillus oryzae RIB40]
gi|83766020|dbj|BAE56163.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391871902|gb|EIT81051.1| DNA repair protein, SNF2 family [Aspergillus oryzae 3.042]
Length = 957
Score = 424 bits (1089), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/584 (42%), Positives = 347/584 (59%), Gaps = 33/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P ALV+ P K K V VVVDP+L+ LRPHQREGVKF+YECV
Sbjct: 243 HDPKQPGALVMKRPASAP--------KGKRIVDVVVDPILAKHLRPHQREGVKFLYECVM 294
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P + KA+IV P +L+ NW
Sbjct: 295 GMRSFNGQGAILADDMGLGKTLQTITLLWTLLKQNPIYENPPEVKKALIVCPVTLINNWR 354
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D K +L F T GR I+++ YE R+ L
Sbjct: 355 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TRGR--AYNIMIVGYEKLRTVQEGLA 405
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +++ DEGHRLK ++++ QA+ L A +RV+LSGTPIQNDL E+F+ V VN G
Sbjct: 406 QGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATKRVILSGTPIQNDLKEFFAAVDLVNPG 465
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG + F +++E PI++ + A+ + K R E+L + ++ ++RRT+ +L+ YLP
Sbjct: 466 VLGNFKAFVREFEVPIVKSRQPEATRKDIEKGEARNEELRELTSQFMLRRTADILANYLP 525
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K+E ++ T Q +Y N++ S + + EN AL IT LKKLCN P L
Sbjct: 526 PKSEYILFCDPTPTQANIYQNVLASPVFQCAVGNSEN------ALQLITILKKLCNSPSL 579
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ + D + SAK+ VLD +L ++ +T +K+VL
Sbjct: 580 LSPR---NVDEKPSETIAALLSSLPPNLLRHFSPSSSAKIRVLDQLLHILHTSTSEKVVL 636
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS +KR +VE FN+ T+ F F+LS+KAGG
Sbjct: 637 VSNYTSTLNLLATLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRFPTNRCFAFLLSAKAGG 696
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 697 TGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 756
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V++ +D A FS EL+ LF+L++++ TH+ + C
Sbjct: 757 KLGLADSVME-HKDNAAQFSRDELKDLFRLDQDSKCQTHELLGC 799
>gi|238484253|ref|XP_002373365.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus
NRRL3357]
gi|220701415|gb|EED57753.1| dsDNA-dependent ATPase (Rad54b), putative [Aspergillus flavus
NRRL3357]
Length = 885
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 246/584 (42%), Positives = 347/584 (59%), Gaps = 33/584 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P ALV+ P K K V VVVDP+L+ LRPHQREGVKF+YECV
Sbjct: 171 HDPKQPGALVMKRPASAP--------KGKRIVDVVVDPILAKHLRPHQREGVKFLYECVM 222
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
G+R + G I+AD+MGLGKTLQ ITL+WTLL+Q P+ + P + KA+IV P +L+ NW
Sbjct: 223 GMRSFNGQGAILADDMGLGKTLQTITLLWTLLKQNPIYENPPEVKKALIVCPVTLINNWR 282
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ D K +L F T GR I+++ YE R+ L
Sbjct: 283 KEFRKWLGNERIGVFVFDDKRK-----RLTDF--TRGR--AYNIMIVGYEKLRTVQEGLA 333
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ V +++ DEGHRLK ++++ QA+ L A +RV+LSGTPIQNDL E+F+ V VN G
Sbjct: 334 QGAGVDIIIADEGHRLKTLQNKSGQAIQSLNATKRVILSGTPIQNDLKEFFAAVDLVNPG 393
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG + F +++E PI++ + A+ + K R E+L + ++ ++RRT+ +L+ YLP
Sbjct: 394 VLGNFKAFVREFEVPIVKSRQPEATRKDIEKGEARNEELRELTSQFMLRRTADILANYLP 453
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K+E ++ T Q +Y N++ S + + EN AL IT LKKLCN P L
Sbjct: 454 PKSEYILFCDPTPTQANIYQNVLASPVFQCAVGNSEN------ALQLITILKKLCNSPSL 507
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ + D + SAK+ VLD +L ++ +T +K+VL
Sbjct: 508 LSPR---NVDEKPSETIAALLSSLPPNLLRHFSPSSSAKIRVLDQLLHILHTSTSEKVVL 564
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS +KR +VE FN+ T+ F F+LS+KAGG
Sbjct: 565 VSNYTSTLNLLATLLTSLSLPFLRLDGSTPAQKRQSLVEDFNRFPTNRCFAFLLSAKAGG 624
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQK+ C +YR L GS+EEK+ QRQ
Sbjct: 625 TGLNLIGASRLILFDVDWNPATDIQAMARIHRDGQKRHCRIYRILLKGSLEEKIWQRQVT 684
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V++ +D A FS EL+ LF+L++++ TH+ + C
Sbjct: 685 KLGLADSVME-HKDNAAQFSRDELKDLFRLDQDSKCQTHELLGC 727
>gi|240280582|gb|EER44086.1| DNA repair and recombination protein RAD54 [Ajellomyces capsulatus
H143]
Length = 649
Score = 423 bits (1087), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/571 (44%), Positives = 328/571 (57%), Gaps = 88/571 (15%)
Query: 69 QILAKPFKVPILNYTGGGYS----TKALGVRREGAR--KALHDPTAPNALVLYTP----- 117
Q+ + F VP++N G Y+ LG+R K LHDP+ A+VLY P
Sbjct: 97 QVFKQRFSVPLINKNSGAYNPNRPAPILGMRSGTTFVVKPLHDPSGEFAIVLYDPTIDDK 156
Query: 118 ----------------------PQLSA-------HDLLKIDK---DKIQVHVVVDPVLSN 145
P+L A D+L I K + ++ VV+DP L+
Sbjct: 157 PVNPNDANDGNGEGEEREKNDPPKLDAPLVHKSLADILGIKKKVDGRPKIPVVIDPKLAK 216
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKT-------------------LQ 186
+LRPHQ EGVKF+Y C TG+ A GCIMADEMGLGKT LQ
Sbjct: 217 VLRPHQVEGVKFLYRCTTGMIDPKANGCIMADEMGLGKTVGSNEFSRWSHGAKYLYFQLQ 276
Query: 187 CITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKA 243
CITL+WTLL+Q P A K I K II PS+LVKNW NE KWLG G V +DG SK
Sbjct: 277 CITLLWTLLKQSPEAGKTTIQKCIIACPSTLVKNWANEFVKWLGEGAVTPFVVDGKASKV 336
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
E+ ++L + + GR V P+L++SYET R + L +GL+LCDEGHRLKN +SQT+
Sbjct: 337 ELTSQLRQWAVSSGRSIVRPVLIVSYETLRLYVDELKDTPIGLLLCDEGHRLKNGDSQTF 396
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
AL L RRV+LSGTPIQNDL EYFSL++F N ILGT EF K+YE PILRG+D+
Sbjct: 397 TALNSLNVDRRVILSGTPIQNDLSEYFSLLNFANPNILGTRNEFHKKYEMPILRGRDADG 456
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
SD +R K +E + +L+ +VN+ +IRRT+ +LSKYLPVK E VV ++ Q +LY I+
Sbjct: 457 SDEDRKKGDECVTELLNVVNKFIIRRTNDILSKYLPVKYEHVVFCQLAPFQTDLYNYFIQ 516
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S ++ ++G G L +I LKKLCNHPDL + GAD + ILP Y
Sbjct: 517 SPDIKSLLRGK-----GSQPLKAIGILKKLCNHPDL----LNLGAD-LPGSEQILPDDYV 566
Query: 484 ASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
G+ + S K+MVLD MLA I+ T+DKIVL+SNYTQTLDLFERL + R Y
Sbjct: 567 PLESRGRDRDVRSWYSGKMMVLDRMLARIRQDTNDKIVLISNYTQTLDLFERLCRTRQYG 626
Query: 541 YVRLDGSMTIKKRAKVVETFNKTSN-EFIFM 570
+RLD ++V+ FN + EF+F
Sbjct: 627 CLRLD---------ELVDKFNDPNGEEFVFF 648
>gi|430811700|emb|CCJ30833.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 767
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 255/665 (38%), Positives = 378/665 (56%), Gaps = 60/665 (9%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKID 129
I K FK P+L ++ + ++ +A HDP P ALV + P++ ++
Sbjct: 84 IHTKKFKTPLL-------TSNIMHIQTSKLPQARHDPNEPGALV-FPRPKVESYQ----G 131
Query: 130 KDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCIT 189
K+ + VVVDP LS LRPHQREGVKF+YECV +R + G I+ADEMGLGK+LQ IT
Sbjct: 132 KNVQIIDVVVDPSLSKHLRPHQREGVKFLYECVMKMREFEGQGAILADEMGLGKSLQIIT 191
Query: 190 LMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLGG--RVAALPIDGGSKAEI 245
L+WTLL+Q P K +I +A+IV P +L+ NW E KW+GG ++ +D
Sbjct: 192 LLWTLLKQSPYYGIKSIIKRALIVCPVTLINNWKKEFRKWIGGNEKIGLFVVDS------ 245
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
NS ++ + V +++I YE R+ L + +++CDEGHRLK+ ++ QA
Sbjct: 246 ----NSNIKNFSVGNVYSVMIIGYERLRNIFDQLEDANIDIIICDEGHRLKST-NKLAQA 300
Query: 306 LMGLKAKRRVLLSGTPIQN----------------DLLEYFSLVHFVNQGILGTAQEFRK 349
+ +K +RR++LSGTPIQN DL E++ +V FVN G+L F+K
Sbjct: 301 IKSIKTRRRIILSGTPIQNGNYYYYYYSISIKLCLDLGEFYVMVDFVNPGLLENYATFKK 360
Query: 350 QYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIK 409
++E PI++ + + ++ K R EQL + ++RRTS +L +YLP E +V K
Sbjct: 361 EFENPIIKSRQAGCMKKDKEKGRARSEQLASLTKMFVLRRTSEILDEYLPPTVEYIVFCK 420
Query: 410 MTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD 469
T LQ ++Y LI + ++ G NT + + L ++T LKK+CN P L+ K + D
Sbjct: 421 PTSLQVDIYRELI--NISMSSLNAG-NTNIAV-HLRALTYLKKVCNSPTLLFHKKKIEQD 476
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
++ T + S + S KL+V D L +K TD+K+V+VS+YTQTL +
Sbjct: 477 -----FDLFHTNIKHKFSSR--CPKDSGKLLVFDKFLEALK-ATDEKVVIVSHYTQTLQI 528
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
E L + Y+RLDG KR + V+ FN +S+ F+LS+K+GG GLNLIGA+RLV
Sbjct: 529 LENLLISKSLSYLRLDGQTANIKRQEYVDKFN-SSDSIAFLLSAKSGGYGLNLIGASRLV 587
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+FD DWNP+ D Q MAR+ RDGQ+K FVYRFL +G I+EK+ QRQ K+ LS +D +
Sbjct: 588 LFDIDWNPSVDLQTMARIRRDGQRKRTFVYRFLISGMIDEKIYQRQITKQGLSDTFIDSK 647
Query: 650 EDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLE--SDCTDDLSCW 706
+ + F+ EL+SLF ++T TH+ + C NG+ V+ E SD +L W
Sbjct: 648 MSLIKDSFTQEELKSLF-FYQDTSCQTHELLSCQCQGNGLNVEKIDYEEFSDDEINLGGW 706
Query: 707 HHVTE 711
+E
Sbjct: 707 VKSSE 711
>gi|115679178|ref|XP_790055.2| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Strongylocentrotus purpuratus]
Length = 335
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/336 (61%), Positives = 254/336 (75%), Gaps = 10/336 (2%)
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
EQVVC ++T +Q +Y +K+ MK T+ ++ LS+IT LKKLCNHP LV D
Sbjct: 1 EQVVCCRLTSMQSCIYQQYVKAMMKECRMK----TQGKVSTLSAITHLKKLCNHPALVYD 56
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
K + DGF + + P GY + +L ELS K+ VLD +LA+ K ++ DK+VLVSN
Sbjct: 57 KCVSSKDGFHDMLQNFPPGY----NNKQLRPELSGKMQVLDYILAITKTSSSDKVVLVSN 112
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLN 581
YTQTLD+FE+L +LRGY +VRLDGSM+IKKRAKVV++FN S EFIFMLSSKAGGCGLN
Sbjct: 113 YTQTLDVFEQLCRLRGYLFVRLDGSMSIKKRAKVVDSFNNPNSPEFIFMLSSKAGGCGLN 172
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
LIGANRLVMFDPDWNPANDDQAMARVWRDGQKK CF+YR L+TG+IEEK+ QRQAHKKAL
Sbjct: 173 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKRCFIYRLLATGTIEEKIFQRQAHKKAL 232
Query: 642 SSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTD 701
SSCVVD EEDV RHFS+ EL+ LF+ +E T+SDTHDK KC+RC+N IQV+ PP +SDC
Sbjct: 233 SSCVVDNEEDVERHFSVDELKDLFRFKEGTLSDTHDKFKCNRCINNIQVRLPPNDSDCNS 292
Query: 702 DLSCWHHVTEKRWLVDPILKHCWGA-GVSFVFYQHS 736
DLS W+H +KR + D +LK W VSFVF+ S
Sbjct: 293 DLSQWNHCADKRGIEDQVLKGVWDTKNVSFVFHHKS 328
>gi|428180190|gb|EKX49058.1| hypothetical protein GUITHDRAFT_52900, partial [Guillardia theta
CCMP2712]
Length = 527
Score = 421 bits (1081), Expect = e-115, Method: Compositional matrix adjust.
Identities = 236/550 (42%), Positives = 344/550 (62%), Gaps = 42/550 (7%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYE-CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLL 195
VV+DPVL ++PHQ G KF+Y+ +T GCI+ADEMGLGKTLQ I L+WTL+
Sbjct: 1 VVLDPVLGMHMKPHQIAGTKFLYKNLMTKHPNSIVSGCILADEMGLGKTLQSIALIWTLM 60
Query: 196 RQGP--LAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPI-DGGSKAEIDNKLNS 251
+Q P L P++ KAIIV PSSLV NW NEI KWLG R++A I GG+ A N +N
Sbjct: 61 KQSPFSLTDPIVRKAIIVCPSSLVFNWANEIKKWLGDQRLSAQAITKGGTNAS--NDVND 118
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCE-SQTYQALMGL 309
F++ +R +L+ISY+ R H +L + + + LV+CDEG +LKN + ++T +L L
Sbjct: 119 FVKGNVKR----VLIISYDMLRRHIQMLSRYQNIQLVVCDEGQKLKNIDGNKTIDSLNAL 174
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD-SCASDAER 368
K R+LLSGTP+QNDL E++++V++V G LG ++FRK + I++ +D SC+ D +R
Sbjct: 175 PCKMRILLSGTPVQNDLDEFYAMVNWVCPGTLGAPKQFRKIFADAIIKSRDKSCSKDLQR 234
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
+RL++LI + ++RRTS + +P K E+V+ + + LQK++Y +L+ S ++
Sbjct: 235 I-GKKRLKELIKRTSPIVLRRTSKDIVAQMPPKYEKVIFCRPSPLQKKIYKSLLSSSELK 293
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
+ ++G G + I+ L K NHPDLV A+ E+ N + +
Sbjct: 294 KAIEGNS----GQVVFTIISKLTKALNHPDLVT------ANQIEDEQN--------NNSN 335
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
L +++ + +T+D++V+VSNYT +LDL + + K YK VRLDGS
Sbjct: 336 ISLKFDINTR--------EFFPSSTNDRVVIVSNYTTSLDLVDTICKKLSYKTVRLDGST 387
Query: 549 TIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
I KR+ +V +FN +S F+F+LSSKAGG GLNLIG NR+++ DP WNPA+D QAMARV
Sbjct: 388 EISKRSDIVSSFNNPSSGIFVFLLSSKAGGVGLNLIGGNRVILLDPSWNPAHDLQAMARV 447
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WR GQ KP FVYR L+TG+IEE++ Q+Q K L S ++D D RHF +L+ +F
Sbjct: 448 WRFGQPKPVFVYRLLTTGTIEERIFQKQIRKGELESLIMDDVGDANRHFDQGDLKDIFIF 507
Query: 668 EENTISDTHD 677
ENT DT+D
Sbjct: 508 SENTSCDTYD 517
>gi|406606250|emb|CCH42357.1| DNA repair and recombination protein [Wickerhamomyces ciferrii]
Length = 905
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 233/599 (38%), Positives = 356/599 (59%), Gaps = 51/599 (8%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
L+DP+ A+++ + S++D VV+DP L LRPHQ +GVKF+YEC+
Sbjct: 249 LYDPSLEGAIIMT---KASSND----------TDVVIDPFLGKKLRPHQVQGVKFLYECL 295
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP--LAKPLIDKAIIVAPSSLVKNW 220
+R D G ++AD+MGLGKTL IT +WTLL+Q P P+++K +I P +L+ NW
Sbjct: 296 MDLRGFDGQGALLADDMGLGKTLMTITTLWTLLKQSPKGFETPVVNKVLIACPVTLIGNW 355
Query: 221 CNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + D + ++ + R V +L++ YE + L
Sbjct: 356 KREFKKWLPMNRLNVLTLSSKNTTSKDKQ---DVKNFARTKVYQVLIMGYEKILNMKDEL 412
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
++ L++CDEGHRLKN ++T Q L L+ +++LLSGTPIQNDL E+F+++ F+N G
Sbjct: 413 KLSKFDLLICDEGHRLKNNSNKTLQVLNSLEISKKILLSGTPIQNDLSEFFNIIDFINPG 472
Query: 340 ILGTAQEFRKQYETPILRGQDS-CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
ILG +F++ + PIL+ +++ C + ++K NE+ ++LI I ++RRTSA++S +L
Sbjct: 473 ILGNFNQFKRNFMNPILKSRETNCINPEIKSKGNEKSQELIDITKPFILRRTSAIMSNHL 532
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKS----DAVRRTMKGGENTKLGMTALSSITSLKKLC 454
P +T+ V+ + T+LQ L+ ++ S + + +T G +LS IT KK+C
Sbjct: 533 PPRTDIVLFCRPTNLQINLFNEVLGSTNFDNMISKTTASG--------SLSLITMFKKIC 584
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
N P L+++ D N ++ + + S K+ VL +L I T+
Sbjct: 585 NSPSLIIN------DKTFNQISDVKISNQIT----------SGKIQVLIELLNEISSKTN 628
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLS 572
+K++LVSNYTQTLD+ + + Y RLDGS K R +V TFN TS+ F F+LS
Sbjct: 629 EKVILVSNYTQTLDILQNILLKLNLTYQRLDGSTPNKDRDSIVNTFNTTSSISNFAFLLS 688
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SK+GG GLNLIGA+RL++FD DWNPA D QAMAR+ RDGQKKP F+YR ++TG I+EK++
Sbjct: 689 SKSGGVGLNLIGASRLILFDNDWNPAIDLQAMARIHRDGQKKPVFIYRLVTTGCIDEKIL 748
Query: 633 QRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQV 690
QRQ K LS +D +++ F +L+ LF L +T S+THD ++C GI +
Sbjct: 749 QRQLMKNNLSDKFLDNQKNSKDDLFDSIDLKDLFTLNLSTNSNTHDLMRCDCEGKGIDI 807
>gi|299751759|ref|XP_002911684.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
gi|298409521|gb|EFI28190.1| RAD54B protein [Coprinopsis cinerea okayama7#130]
Length = 1055
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 255/686 (37%), Positives = 375/686 (54%), Gaps = 77/686 (11%)
Query: 45 NEDEPNSKLPMTK-EEMSEHENLIRQ-----ILAKPFKVPILNYTGGGYSTKALGVRREG 98
+ D P+S++P K + +S+ E+LI + +AKP TG S+ + +
Sbjct: 248 DRDVPSSQVPKAKGQPLSQEEDLITEPSPPPTIAKP-------STGIAASSFYGAPKAKQ 300
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREG---- 154
+ LHDP AP A+V P + AH D V VV+DP+L+ +RPHQ EG
Sbjct: 301 PKGPLHDPNAPGAVVFKAPNK--AHMQRYNKYDLPVVPVVLDPILARRMRPHQIEGTVIC 358
Query: 155 VKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVA 212
V FMYECV G+R + GCI+ADEMGLGKTLQ I L+WTLL+Q P A P+ KA+IV
Sbjct: 359 VSFMYECVMGLRKHEGNGCILADEMGLGKTLQTIALVWTLLKQNPYSGAGPIAKKALIVC 418
Query: 213 PSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
P SL+ NW E KWLG + + K ID + Q +L+I YE
Sbjct: 419 PVSLITNWKAEFHKWLGRDRVGITVVDKEKVNIDAFFYNKTQH--------VLIIGYERL 470
Query: 273 RSHASVLHKN--EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
R+ + + + + L++CDEGHRLK+ ++T L+ +RR++LSGTPIQNDL E+
Sbjct: 471 RTVINKVSTSVPPIDLIICDEGHRLKSANNKTTAMFKALRTRRRIILSGTPIQNDLSEFH 530
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT 390
++ F N G+L F++ YETPIL+ + A+ E R E L+ + N ++RR
Sbjct: 531 AMTEFCNPGLLDEYPVFKRVYETPILKSRAPEATAKEIEVGEARTESLLQVANSFVLRRD 590
Query: 391 SALLSKYLPVK-----------------TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
+ LL K+LP K E VV + T LQ +++ +++ + + G
Sbjct: 591 ATLLKKHLPPKRRCIAYIRMDQYLIPFPDEYVVFVTPTRLQISMFSAILRPERIDDLASG 650
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMD-----KIQTGAD--------GFENAMNILPT 480
L + I L K+ N P L+ K +TG G + A+ ++P
Sbjct: 651 STAESLAL-----INILTKISNSPILLKATADSYKARTGDKESSCLERAGVKEALRLMPE 705
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
G S + LS KL+VL ML I+ T++K V+VS++T TL++ E + GY
Sbjct: 706 GAQVSD------MTLSGKLIVLAKMLKDIRNNTEEKCVVVSHFTSTLNILEAFCQQAGYS 759
Query: 541 YVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
+ RLDG +KR + V FNK+S F+F+LSSKAGG G+NLIG +RL + D DWNP+
Sbjct: 760 FYRLDGQTPQQKRQEYVNAFNKSSQRGGFVFLLSSKAGGVGINLIGGSRLFLIDSDWNPS 819
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR---H 655
+D QAMAR RDGQK+P F+YR ++ G+I+EK+ QRQ K LS+ ++ + A
Sbjct: 820 HDLQAMARCHRDGQKRPVFIYRLVTAGTIDEKIFQRQITKLGLSASLIGSADGSASKSDS 879
Query: 656 FSMSELRSLFQLEENTISDTHDKIKC 681
FS +LR +F+++ NT +THD ++C
Sbjct: 880 FSKKDLRDIFRIDPNTSCNTHDLLEC 905
>gi|258563128|ref|XP_002582309.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237907816|gb|EEP82217.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 939
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 239/584 (40%), Positives = 339/584 (58%), Gaps = 57/584 (9%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP P A+V+ P + K+K V VV+DP+L LR HQREGVKF+YECV
Sbjct: 274 HDPNQPGAIVMKRP--------TSVPKEKQLVDVVIDPLLGKHLREHQREGVKFLYECVM 325
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWC 221
G+R + G ++ADEMGLGKTLQ I L+WTL++Q P+ A P++ KA+IV P +L+KNW
Sbjct: 326 GMRPFNGEGAVLADEMGLGKTLQTIALLWTLMKQNPIHEAPPVVKKALIVCPVTLIKNWQ 385
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWLG R+ DG D + +Y +++I YE R+ L
Sbjct: 386 KEFKKWLGNDRLGVFVADGKHMRLTDFTMG---MSYN------VMIIGYERLRTVQEELT 436
Query: 281 KNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K + +V+ DEGHRLK ++++ QA+ L RR++LSGTPIQNDL E+F++V FVN G
Sbjct: 437 KGRGIDIVIADEGHRLKTVQNKSAQAIQSLNTARRIILSGTPIQNDLSEFFAMVDFVNPG 496
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LGT + F K++E PI++ + AS E K R E+L + + ++RRT+ +L K+LP
Sbjct: 497 LLGTFKMFMKEFEGPIVKSRQPGASRKEIEKGKARSEELASLTSLFILRRTADILLKHLP 556
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
KTE ++ T Q +Y +++ S + + E + S+I+SL
Sbjct: 557 PKTEYILFCNPTPAQANIYRHVLASPIFQSALGNSETE----NSNSTISSL--------- 603
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
++ LP + S K+ VLD +L ++ TT +K+VL
Sbjct: 604 ---------------LSTLPPNLLRHFSPAS-----SGKIRVLDQLLHNLRSTTSEKVVL 643
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGG 577
VSNYT TL+L L ++RLDGS KR +V+ FN++S+ F F+LS+KAGG
Sbjct: 644 VSNYTSTLNLLAALLTSLALPFLRLDGSTPANKRQYLVDDFNRSSSSSCFAFLLSAKAGG 703
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNL GA+RLV+FD DWNPA D QAMAR+ RDGQK+ C +YR L G +EEK+ QRQ
Sbjct: 704 IGLNLTGASRLVLFDVDWNPATDIQAMARIHRDGQKRHCHIYRMLLRGGLEEKIWQRQVT 763
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K L+ V+D + +A HFS ELR LF+L+E T TH+ + C
Sbjct: 764 KIGLADSVMDQKGGIA-HFSREELRDLFRLDEETECQTHELLAC 806
>gi|50553882|ref|XP_504352.1| YALI0E24431p [Yarrowia lipolytica]
gi|49650221|emb|CAG79951.1| YALI0E24431p [Yarrowia lipolytica CLIB122]
Length = 940
Score = 416 bits (1070), Expect = e-113, Method: Compositional matrix adjust.
Identities = 233/562 (41%), Positives = 335/562 (59%), Gaps = 42/562 (7%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V +DP+L+ LRPHQRE V F+Y CV G YG ++ADEMG+GKTL I L+WTLL+
Sbjct: 309 VKIDPLLNTALRPHQREAVDFLYRCVMGFNPTSGYGALLADEMGMGKTLMSIALIWTLLK 368
Query: 197 QGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
Q PL PL + +IV P +LV NW EI KWLG R+ + I ++ + F
Sbjct: 369 QTPLKGEPPLAKRVLIVCPVTLVNNWKTEIKKWLGPSRLGVMAITDSMSIDLGTVIRDF- 427
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
TYGR VN +++I YE + L LV+CDEGHR+K ++ A+ L R
Sbjct: 428 -TYGR--VNQVMIIGYERLLRISDQLQSANFDLVICDEGHRMKTAGNKAANAIQSLGVAR 484
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
+++LSGTPIQNDL E+F +V F+N G+LG+ Q+F K Y PI+R + A +E K +
Sbjct: 485 KIILSGTPIQNDLKEFFVMVDFLNPGLLGSFQQFNKDYIIPIVRSRAPDAFPSELEKGQK 544
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
+ +L I + ++RRT+ +LS++LP KTE V+ Q E+YT L S+ + R +
Sbjct: 545 QSARLSSITGQFILRRTADILSRFLPPKTETVLFCLPNAQQTEIYTKL-SSEYLNRLERH 603
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
+ + SI SL+K+CN P L+ + DG + SGK +
Sbjct: 604 ------QVDSFKSILSLRKVCNSPILLSE------DG-------------PALDSGKAYL 638
Query: 494 ELSAKLMVLDTMLAVI----KMTTD--DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
S K+ L M+ + KM D +K+V+VS++TQTLD+ E L K + RLDGS
Sbjct: 639 RNSGKMNTLFRMIGQLRARNKMDPDNAEKVVIVSSFTQTLDVIEGLVKDLKLSFTRLDGS 698
Query: 548 MTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
+ RAK+V+ FN +S + F+F+LS++AGG G+NLIGA+RL +FDPDWNPA D QAMA
Sbjct: 699 VQASARAKIVKQFNSSSADSCFVFLLSARAGGVGINLIGASRLFLFDPDWNPAVDLQAMA 758
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R+ RDGQKKP ++YR L+TG I+EK+ QRQ K L++ +++ E+ A F+ EL+ LF
Sbjct: 759 RIHRDGQKKPVYIYRLLTTGCIDEKIFQRQTIKTGLANSLIEGTEE-ADTFTDEELKKLF 817
Query: 666 QLEENTISDTHDKIKCSRCVNG 687
++ T +THD ++C NG
Sbjct: 818 SMDVLTHCNTHDLMECKCEHNG 839
>gi|302853754|ref|XP_002958390.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f.
nagariensis]
gi|300256270|gb|EFJ40540.1| hypothetical protein VOLCADRAFT_99672 [Volvox carteri f.
nagariensis]
Length = 854
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 244/586 (41%), Positives = 334/586 (56%), Gaps = 43/586 (7%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VV+DP L LRPHQ+EGV+FMYE V G+ D GCI+ADEMGLGKTLQ ITL WTL
Sbjct: 155 VPVVIDPYLGRHLRPHQQEGVRFMYEAVMGLTSPDRTGCILADEMGLGKTLQVITLAWTL 214
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR----VAALPIDGGSKAEIDNKLN 250
LRQGP +PL K ++VAP++LV NW E+ KWLG LP L+
Sbjct: 215 LRQGPEGRPLAAKVLVVAPATLVDNWGREVKKWLGSERLQLCLYLPC---------LSLH 265
Query: 251 SFMQTYGRRPVNPILVIS-------YETFRSHASVLHKNEVGLVLCDEGHRLKNC-ESQT 302
+ G+ + + + YET R HA L K L++CDEGHRLK+ ++T
Sbjct: 266 CYGTVTGQTYLQTLCLQQASAAKQHYETLRKHAGDL-KGAFDLLVCDEGHRLKSVGGNKT 324
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
AL+ L RR+LL+GTP+QNDL E+++L+ FV +LGT F + Y PI R Q++
Sbjct: 325 IDALLSLDCPRRILLTGTPVQNDLKEFYALLSFVVPDVLGTPAVFNRVYGIPITRSQEAT 384
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI 422
A+ E+ R +L V ++RRT ALL+K+LP T + K +D Q LY+ ++
Sbjct: 385 ATAEEKELGAGRASELQSKVAVFILRRTQALLAKHLPPLTSLTLFCKPSDQQIGLYSAVL 444
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI----- 477
+S AV + GG + L+ IT+L+K+ NHPDL++D + N
Sbjct: 445 RSKAVASLLYGGGGGE--DNTLAVITALRKVANHPDLLLDPSGDAGEATAEGANTGRTCS 502
Query: 478 ---LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL- 533
LP+ +G + + K+ VL +L+ I ++ V+VS T TLDL +L
Sbjct: 503 SSCLPSFSKQFTATGSH--QAAGKMQVLSLLLSAIA-ARGERCVVVSTSTATLDLVGQLV 559
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
K +G VR+DG +++ R VV+ FNK +F+LS++AGG GLNL+GA LV++D
Sbjct: 560 CKAQGLTTVRIDGGTSVEGRQTVVDNFNKLGMGQVFLLSTRAGGAGLNLVGACHLVLYDS 619
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD------ 647
DWNPA D QAMAR+WRDGQ KPCFVYR L+TG+IEEK+ QRQ K L+S V
Sbjct: 620 DWNPAMDQQAMARIWRDGQTKPCFVYRLLTTGTIEEKVYQRQLMKADLASATVTGGSGAA 679
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
F+ ELR LF L T SDT D + + V G++ K P
Sbjct: 680 GGSKGGGKFTREELRQLFSLNTATASDTRDLLPQGK-VAGLRWKEP 724
>gi|157128256|ref|XP_001661368.1| hypothetical protein AaeL_AAEL002341 [Aedes aegypti]
gi|108882255|gb|EAT46480.1| AAEL002341-PA [Aedes aegypti]
Length = 851
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/536 (43%), Positives = 324/536 (60%), Gaps = 33/536 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA--YGCIMADEMGLGKTLQCITLMWTL 194
V V LS LRPHQREGV F+YECV G R DA +G I+ADEMGLGKTLQCI+L++TL
Sbjct: 235 VTVPYALSKHLRPHQREGVSFLYECVLGFRYTDADRFGAILADEMGLGKTLQCISLIYTL 294
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFM 253
++QGP ++P++ + +IV PSSL++NW EI+KWL R+ + + +
Sbjct: 295 MKQGPYSQPILKRILIVTPSSLMENWDREISKWLKTERIFTFIVSPTNP----------L 344
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
+ Y + PIL+ISYE L + L++CDEGHRLKN +T L ++ R
Sbjct: 345 KKYAQSAHIPILIISYELLSKQIRELDSVKFDLMICDEGHRLKNSAIKTSSILDAVECPR 404
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R+LL+GTPIQNDL E++SL+ FVN G+LGT EF+ ++E PIL+ Q
Sbjct: 405 RILLTGTPIQNDLQEFYSLITFVNPGLLGTYSEFKTKFENPILQSQQPGVLPMFANLGKA 464
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
RLE+L I + ++RRT +++KYLP K E V+ + LQ+ L A++ K
Sbjct: 465 RLEELNSITSSFILRRTQEVINKYLPGKQEAVIFCHPSKLQETLLRT-----AIQFYEKS 519
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLV--MDKIQTGADGFENAMNILPTGYAASYKSGKL 491
+T L IT LKK+CNHP L+ +KI G + + LP
Sbjct: 520 DRSTYF---PLQLITVLKKICNHPSLIASTEKIDVGGSLIKLLNDNLPPWQDMGPTD--- 573
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
S KL VLD++L + + +K V+VS Y +TLD+ L + YKY RLDGS +
Sbjct: 574 ----SGKLAVLDSLLETL-IQRQEKAVIVSYYGKTLDMIMGLCEHYNYKYCRLDGSTPSQ 628
Query: 552 KRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
R K+V +FN +S+ FIF+LS+KAGG GLNL GA+RL+++D DWNPA+D QAM+R+WRD
Sbjct: 629 DRCKIVSSFNSPSSDTFIFLLSAKAGGIGLNLTGASRLILYDNDWNPASDLQAMSRIWRD 688
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLF 665
GQ + F+YR ++ SIEEK+ QRQ K +LS VVD +++++ FS EL+ LF
Sbjct: 689 GQTRNVFIYRLITAFSIEEKIYQRQISKTSLSGTVVDLKQNLSNLKFSDEELKDLF 744
>gi|303277253|ref|XP_003057920.1| SNF2 super family [Micromonas pusilla CCMP1545]
gi|226460577|gb|EEH57871.1| SNF2 super family [Micromonas pusilla CCMP1545]
Length = 945
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 254/621 (40%), Positives = 350/621 (56%), Gaps = 57/621 (9%)
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
AR LHDP A +L +P D+ VVVDP+L LRPHQR+GV+FM
Sbjct: 245 ARPPLHDPAREGATLLSSP-----GDVFP-GFGPASTAVVVDPILGASLRPHQRDGVRFM 298
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVK 218
+ECV+G R GC++A EMG+GKTLQ I L+WTLL+QGP P++ KA+I P+SLV
Sbjct: 299 FECVSGRRAGGHRGCLLAHEMGMGKTLQVIALLWTLLKQGPRGTPMVKKAVIACPASLVS 358
Query: 219 NWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHAS 277
NW E+ KWLG R+A L ++GG K + + + + + +R +LV SYET RS+AS
Sbjct: 359 NWGAEMKKWLGQTRLAPLLVEGGDK-DAKSLFDDWALAHQKR--YAVLVTSYETLRSYAS 415
Query: 278 VLHKNEVGLVLCDEGHRLKNC--ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
+ V L++CDE HRLKN ++ T AL LK RRVLLSGTPIQNDL EYF L+ F
Sbjct: 416 KIESGGVDLLVCDEAHRLKNAKGDTLTVAALRALKCNRRVLLSGTPIQNDLTEYFGLMDF 475
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
G+LG F+K + PI R +D AS ERT R E+L + + R +++ ++
Sbjct: 476 ACPGLLGDLGPFKKIFSGPIERSRDKRASADERTIGAARGEELARMTREYVHRASASEVN 535
Query: 396 KY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
LP KTE VV ++++ Q LY L+K+ AVR + GG+ + L+++ L++L
Sbjct: 536 ARHGLPPKTEYVVFVRLSPTQAALYGALLKTAAVRGAL-GGKGSP-----LTALQKLQRL 589
Query: 454 CNHPDLVMDKIQTGA-------DGFENAMNI---LPTGYAASY--KSGKLLIELSAKLMV 501
CN L+ G D E+ + +P GY + + L S KL V
Sbjct: 590 CNSARLLASGGGGGGGDVVDENDAEEDIRALRARVPRGYDDPFDATADALSPSFSGKLAV 649
Query: 502 LDTMLAVIKMTTD--DKIVLVSNYTQTLDLFE---RLSKLRGYKYVRLDGSMTIKKRAKV 556
L TML + TT DK V+VS +T TLDL + + G RLDGS+ R +
Sbjct: 650 LLTML---RATTPGVDKTVVVSGFTSTLDLIAAALSAAGVGGKVSSRLDGSVAPNLRGAI 706
Query: 557 VETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
V FN +F+LS KAGG GLNL+GANRLV+FD DWNPAND QA+ARVWR+GQK+P
Sbjct: 707 VNKFNDGKGGDVFLLSCKAGGVGLNLVGANRLVLFDSDWNPANDLQALARVWREGQKRPV 766
Query: 617 FVYRFLSTGSIEEKMMQRQAHK----KALSSCVVDCEEDVAR-------------HFSMS 659
+YR +STG++EE++ QRQ K A+ V+ S
Sbjct: 767 TIYRLVSTGTVEERVFQRQILKGDVADAMGMASVNKRGGDGDGGGGGGGGGAGKMSLSKE 826
Query: 660 ELRSLFQLEENTISDTHDKIK 680
ELR LF+ +E T+ +T + ++
Sbjct: 827 ELRDLFRFDERTVCNTVEVLR 847
>gi|326469499|gb|EGD93508.1| dsDNA-dependent ATPase Rad54 [Trichophyton tonsurans CBS 112818]
Length = 613
Score = 413 bits (1062), Expect = e-112, Method: Compositional matrix adjust.
Identities = 238/512 (46%), Positives = 315/512 (61%), Gaps = 60/512 (11%)
Query: 75 FKVPILNYTGGGYST----KALGVRREGAR---KALHDPTAPNALVLYTPP--------- 118
F VP+++ + G Y++ LG+R GA K LHDP+ A+VLY P
Sbjct: 113 FHVPLIDKSSGNYNSGRAAPTLGMR-CGATFVVKPLHDPSGEFAIVLYDPTIDDKPDDNN 171
Query: 119 ------------------------QLSAHDLLKIDKD---KIQVHVVVDPVLSNILRPHQ 151
S ++L I K+ + +V VV+DP L+ ILRPHQ
Sbjct: 172 ESKDTAGNKDGEEVEQKKLNQPLVHKSLAEILGIKKNVDERPKVPVVIDPRLAKILRPHQ 231
Query: 152 REGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAII 210
EGVKF+Y C TG+ ++A+GCIMAD MGLGKTLQCITLMWTLL+Q P A KP + KA+I
Sbjct: 232 IEGVKFLYRCTTGLVDKNAHGCIMADGMGLGKTLQCITLMWTLLKQSPEAGKPTVQKAVI 291
Query: 211 VAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
P++LV NW NE+ KWLG + IDG SK E+ ++L + GR V P+L++S
Sbjct: 292 ACPATLVGNWANELVKWLGKDAINPFVIDGKASKTELISQLRQWAIASGRSVVRPVLIVS 351
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
YET R ++ L ++GL+LCDEGHRLKN +SQTY AL L ++RV+LSGTPIQNDL E
Sbjct: 352 YETLRMNSDELRDTQIGLLLCDEGHRLKNADSQTYVALNKLNVQKRVILSGTPIQNDLSE 411
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
YFSL+ F N GILG+ EF K YE PILRG+D+ +D ++ K NERL +L+ +VN+ +IR
Sbjct: 412 YFSLLDFANPGILGSRSEFHKTYEIPILRGRDADGTDEQQKKGNERLAELLNLVNKFIIR 471
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
R++ LLSKYLPVK E VV + Q +LY + I+S ++ ++G G L +I
Sbjct: 472 RSNDLLSKYLPVKYEHVVFCNLAPFQLDLYNHFIQSPEIKSLLRGK-----GSQPLKAIG 526
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY-KSGKLLIE--LSAKLMVLDTM 505
LKKLCNHPDL+ K+ G E P S + G ++ S K+MVLD M
Sbjct: 527 ILKKLCNHPDLL--KLSEDLPGCE---QYFPEDMMVSNGRRGDREVKTWYSGKMMVLDRM 581
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LA I+ T+DKIVL+SNYTQTLDLFERL + R
Sbjct: 582 LARIRQDTNDKIVLISNYTQTLDLFERLCRAR 613
>gi|365762059|gb|EHN03672.1| Rdh54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 920
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 235/594 (39%), Positives = 349/594 (58%), Gaps = 69/594 (11%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV------------------RIEDAYGCIM 175
+V V+VDP++ LRPHQREGVKFMY+C+ G+ D GC++
Sbjct: 249 EVDVIVDPLVGKFLRPHQREGVKFMYDCLMGLARPSFEDQNSDAKSLVLENDSDISGCLL 308
Query: 176 ADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWCNE 223
AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW E
Sbjct: 309 ADDMGLGKTLMSITLIWTLIRQDPFASKVPCSQSGIPLSGLCKKTLVVCPVTLIGNWKRE 368
Query: 224 ITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
KWL R+ L + + ++D + +F++ + +L+I YE S + L K
Sbjct: 369 FGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEELEK 425
Query: 282 NE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
N+ + L++CDEGHRLKN S+ L L K+++LL+GTPIQNDL E+F+++ F+N G
Sbjct: 426 NKHLIDLLVCDEGHRLKNGASKILNTLKSLDVKKKLLLTGTPIQNDLNEFFTIIDFINPG 485
Query: 340 ILGTAQEFRKQYETPILRGQDSCA--SDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
+LG F++++ PI R +D+ +D K E+ +++I I R ++RRT+++L KY
Sbjct: 486 VLGNFASFKRRFIIPITRARDTANRYNDDVLEKGEEKSKEMIEITKRFILRRTNSILEKY 545
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKS---DAVRRTMKGGENTKLGMTALSSITSLKKLC 454
LP KT+ ++ K D Q + ++++ D R T ++L IT LKK+C
Sbjct: 546 LPPKTDIILFCKPYDEQILAFKDILQGARLDFRRLTFS---------SSLGLITLLKKVC 596
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
N P L+ G+D + N++ I T SY S KL VL T+L I+ T+
Sbjct: 597 NSPGLI------GSDSYYNSL-IKDTQSQGSYSRSLN----SGKLKVLMTLLEGIRKRTE 645
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSK 574
+K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN++ F F+LS+K
Sbjct: 646 EKVVIVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRSPAIFGFLLSAK 705
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
+GG GLNLIGA+RL++FD DWNP+ D QAM+R+ RDGQK PCF+YR ++TG I+EK++QR
Sbjct: 706 SGGVGLNLIGASRLILFDNDWNPSVDLQAMSRIHRDGQKNPCFIYRLVTTGCIDEKILQR 765
Query: 635 QAHKKALSSCVVDCEEDVARH------FSMSELRSLFQLEENTISDTHDKIKCS 682
Q K +LS + E + F+ +L+ LF + NT S+THD I CS
Sbjct: 766 QLMKNSLSQKFLGDSETKNKGSSNDDLFNKEDLKDLFSVHTNTKSNTHDLI-CS 818
>gi|402219506|gb|EJT99579.1| hypothetical protein DACRYDRAFT_109677 [Dacryopinax sp. DJM-731
SS1]
Length = 1072
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/609 (40%), Positives = 345/609 (56%), Gaps = 47/609 (7%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP ALVL P AH VVVDPVL+ LRPHQREGV FMYE V
Sbjct: 335 LHDPDQAGALVLPRP--TPAHQTRAGKSGYTIEDVVVDPVLATKLRPHQREGVIFMYEAV 392
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQC-----ITLMWTLLRQGPL--------AKPLIDKAI 209
G+R + +G I+ADEMGLGKTLQ I L+WTLLRQ P K I KA+
Sbjct: 393 MGMRRHEGFGAILADEMGLGKTLQASSNKTIALLWTLLRQTPYRPREPIYHHKGEIGKAM 452
Query: 210 IVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
IV P SLV NW +EI KWLG + + AE NK+ F+ + G + +L+I Y
Sbjct: 453 IVCPVSLVGNWRSEIWKWLGRDRMGVFV-----AEETNKIKQFLNSRG----HDVLIIGY 503
Query: 270 ETFRSHASVLHKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLL 327
E RS +L ++ + L++CDEGHRLK+ ++T Q LK KRR++LSGTPIQNDL
Sbjct: 504 EKLRSVIDMLVYSDPMIDLIICDEGHRLKSSNNKTSQMFTALKTKRRIILSGTPIQNDLS 563
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
E++S+ F N G+LG +F++ YE PI+R + ++ + R QL ++
Sbjct: 564 EFWSMAEFCNPGLLGQYNDFKRIYEQPIVRARAPNCTEKNKEIGEARSSQLSSTAKSFVL 623
Query: 388 RRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSI 447
RRT+ +L+ YLP K E V I+ T +Q +L ++ S A+ R ++ G L M ++
Sbjct: 624 RRTADILTSYLPPKYEYVAFIRPTKVQIDLMQRVLTSQAIGRALRNGMAQALEMMSI--- 680
Query: 448 TSLKKLCNHPDLVMDKIQ---TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
L K+C P L+ + A ++ ++ LP S S S KL+ L
Sbjct: 681 --LGKICTSPVLLKTTAKPPSQWAPEYQEIVSRLPRHMEESDSS------FSGKLIALMN 732
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
+L ++ T++K+++VS +T+TLD+ E + + RLDG+ +R V+TFN+T+
Sbjct: 733 LLDAVRKITEEKVIVVSQFTKTLDVVEAICTKMRWTRERLDGTTPQNERDSRVQTFNRTN 792
Query: 565 NE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
FIF+LS KAGG GLNL+GA+RL++ D WNPA+D QAMAR+ RDGQK+P +YRFL
Sbjct: 793 QAECFIFLLSLKAGGVGLNLVGASRLILLDSSWNPAHDLQAMARIHRDGQKRPVHIYRFL 852
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDV-ARHFSMSELRSLFQLEENTISDTHDKIKC 681
+ G+I+EK+ RQ K L+ D + F+ ELR LF++ +T THD + C
Sbjct: 853 TVGTIDEKVYMRQVIKTGLTLMAGDGDGKAKGDSFTHDELRDLFRIHTHTPCHTHDLLDC 912
Query: 682 ----SRCVN 686
SR VN
Sbjct: 913 DCAASRLVN 921
>gi|255072671|ref|XP_002500010.1| SNF2 super family [Micromonas sp. RCC299]
gi|226515272|gb|ACO61268.1| SNF2 super family [Micromonas sp. RCC299]
Length = 800
Score = 412 bits (1060), Expect = e-112, Method: Compositional matrix adjust.
Identities = 245/584 (41%), Positives = 343/584 (58%), Gaps = 50/584 (8%)
Query: 84 GGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVL 143
GGG + A+ R+ LHDP A+V+ + + DL + + V VVVDP +
Sbjct: 242 GGGLNGAAI------ERQPLHDPNKEGAIVMSS----AGVDL---PEGRSNVTVVVDPFI 288
Query: 144 SNILRPHQREGVKFMYECVTGVRIEDAYG-----CIMADEMGLGKTLQCITLMWTLLRQG 198
LRPHQR+GV+FMYECV G+R A G C++A EMG+GKTLQ I L+WTLL+QG
Sbjct: 289 GRHLRPHQRDGVRFMYECVVGLRRGGASGSIHKGCLLAHEMGMGKTLQVIALLWTLLKQG 348
Query: 199 PLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTY 256
P+A KP++ KA+I P+SLV NW EI KWL R+ L ++GG A+ K +
Sbjct: 349 PIAGKPVVRKAVIACPASLVGNWGGEIKKWLNDTRLEPLLVEGGEGADGKQKFEDWALPN 408
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVG--LVLCDEGHRLKNC--ESQTYQALMGLKAK 312
RR + +LV SYET RSHA + K G L++CDE HRLKN ++QT AL L+
Sbjct: 409 QRR--HCVLVTSYETLRSHAKTVQKATGGIDLLVCDEAHRLKNTKGDTQTIAALRALRCD 466
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RRVLL+GTPIQNDL E+F+++ F G+LG A F+K + TP+ +D A+ E+
Sbjct: 467 RRVLLTGTPIQNDLGEFFAVMDFACPGLLGDASVFKKVFSTPVEASRDKHATAEEKRIGA 526
Query: 373 ERLEQLIGIVNRCLIRRTSA--LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
R +L G + R + R SA + +K+LP KTE VV ++ + +Q LY +++ A
Sbjct: 527 ARSAEL-GRMTREFVHRASARDVNAKHLPPKTEYVVFVRPSPVQAALYRAVLRRGA---- 581
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVM-------DKIQTGADGFENAMNILPTGYA 483
+ G L ++ L++LCN L+M + G + + +P GY
Sbjct: 582 -------RDGSQPLRALQQLQRLCNSASLLMRARGEGEEGEDVGGGSLSDLSSKVPEGYP 634
Query: 484 --ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
+ + +S KL VL ML ++ D K V+VS YT TLD+ + G K
Sbjct: 635 DPSDPRVPAHDEAMSGKLAVLIRMLQGMRRGID-KTVIVSGYTSTLDIIAEACLVMGGKV 693
Query: 542 VRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDGS+ +R +V +FN +F+LS+KAGG GLNL+GANRLV+FD DWNPAND
Sbjct: 694 SRLDGSVPPNQRVPLVNSFNAGRGGDVFLLSTKAGGVGLNLVGANRLVLFDSDWNPANDL 753
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
QA+ARVWRDGQK+P +YR +STG++EEK+ QRQ K ++SC+
Sbjct: 754 QALARVWRDGQKRPVTIYRLVSTGTVEEKIFQRQMLKGDVASCM 797
>gi|428672984|gb|EKX73897.1| recombinational repair protein, putative [Babesia equi]
Length = 1841
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/519 (43%), Positives = 322/519 (62%), Gaps = 14/519 (2%)
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILV 266
K I+ P+SLV NW +EI KWL G+ I + ++ + F R +L+
Sbjct: 1251 KCAIICPASLVSNWESEIKKWLRGKCPCTAIADSGREKVISAFEGFKYDNNSR----VLI 1306
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
SYET+R H + L + L++CDE HRLKN ++QT ++ AK R++LSGTPIQNDL
Sbjct: 1307 SSYETYRMHCARLQGVPIDLIICDEAHRLKNDKTQTSLSISSSPAKMRLMLSGTPIQNDL 1366
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E++SL+ N +LG FR+ + PIL G++ A+ ++ A +RL +L I N+ +
Sbjct: 1367 NEFYSLISLCNPDVLGDVNNFRRCFANPILIGREPDATPEQQRMAGDRLAELSHITNQFV 1426
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RRT+ LLSK LP K V +TD+QK +Y + + S + +K + + L++
Sbjct: 1427 LRRTNVLLSKVLPPKIILNVFCNLTDIQKTIYKSFVNSKRWKNIIK---DEGVFSRTLTA 1483
Query: 447 ITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
I SL KLCNHP L+ + + D + NI +K + +LS K++VL +
Sbjct: 1484 IQSLMKLCNHPLLIKRGGLLSTPDVDDLFENIELASKNNKHKCCRC--DLSGKILVLYRL 1541
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
L I+ +D++V++SNYTQTLD+FERL + Y +VRLDG+++IKKR K+V TFN T+
Sbjct: 1542 LYHIRKNGNDRVVIISNYTQTLDIFERLCRECNYPFVRLDGTISIKKRHKLVTTFNDPTT 1601
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
N FIF+LSSKAGGCG+NLIGANRLV+FDPDWNPAND QA+ARVWRDGQKK C++YRF ST
Sbjct: 1602 NSFIFLLSSKAGGCGINLIGANRLVLFDPDWNPANDKQALARVWRDGQKKVCYIYRFFST 1661
Query: 625 GSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSR 683
G+IEEK+ QRQ K LSS +V D ++ S EL++LF +++ +SDTHD I C+R
Sbjct: 1662 GTIEEKIYQRQICKDGLSSMLVTDGINELKDSLSGEELKNLFDYKDSILSDTHDTIDCTR 1721
Query: 684 CVNGIQVKP--PPLESDCTDDLSCWHHVTEKRWLVDPIL 720
C G + P P +DL+ W H T+ + D L
Sbjct: 1722 CNRGEETVPFVPQEREVLEEDLNTWAHHTDLSTVPDEFL 1760
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 29/153 (18%)
Query: 70 ILAKPFKVPILNYTGG---GYSTKALGVRREGARK----------------ALHDPTAPN 110
+L KPFK P+ +T G K LG R G K AL + N
Sbjct: 48 VLLKPFKSPLEGHTPGLSEESQRKTLGCRIRGVTKSFLRDFRASIYETKDEALENLPPDN 107
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
L LYT P +D++QV + VD +LS LR HQR+GV+F+++C+ G++ +
Sbjct: 108 PLTLYTSPP----------EDEVQVVIKVDSMLSRFLRDHQRQGVQFIFDCLMGLKEFNG 157
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP 203
GCI+AD+MGLGKTLQ IT+MWTLL+QG +P
Sbjct: 158 RGCILADDMGLGKTLQSITVMWTLLKQGFDNRP 190
>gi|50311185|ref|XP_455616.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644752|emb|CAG98324.1| KLLA0F11814p [Kluyveromyces lactis]
Length = 931
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 251/634 (39%), Positives = 366/634 (57%), Gaps = 74/634 (11%)
Query: 99 ARKALHD-PTAPNAL----------VLYTP--PQLSAHDLLKIDK-DKIQVHVVVDPVLS 144
A+K L D PT +AL + Y+P +S D L ++K + +V V+VDP+LS
Sbjct: 216 AQKQLVDQPTVKSALPPLSQELIGQITYSPLFDPVSIKDPLIMNKTENHKVSVIVDPLLS 275
Query: 145 NILRPHQREGVKFMYECVTGV------------RIEDAYGCIMADEMGLGKTLQCITLMW 192
LRPHQREGVKF+Y+CV + R +D GC++ADEMGLGKTL ITL+W
Sbjct: 276 KTLRPHQREGVKFLYDCVMNMVHTKGDESMILERDDDIKGCLLADEMGLGKTLMTITLIW 335
Query: 193 TLLRQGPLAKPL----------IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-G 240
TLL+Q P + I K +IV P +L+ NW E KWL R+ L +
Sbjct: 336 TLLKQTPYPTIINQRGVTLAGEISKVLIVCPVTLIGNWKKEFKKWLPMNRIGVLTLHSRN 395
Query: 241 SKAEIDNKLNSFMQ---TYGRRPVNPILVISYETFRSHASVLH--KNEVGLVLCDEGHRL 295
S E ++ SF++ TY +L++ YE S L K + LV+CDEGHRL
Sbjct: 396 SPTEDKAQVRSFLKVPRTYQ------VLIVGYEKLLSIKDELQNEKRNLDLVICDEGHRL 449
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN +S+ + L L +++++LSGTPIQNDL E+++++ F+N GILG+ F+++Y PI
Sbjct: 450 KNKDSKILKVLQSLDIEKKIVLSGTPIQNDLEEFYTIIDFINPGILGSFGRFKREYILPI 509
Query: 356 LRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
R +D A + + R +QLI I R ++RRT+ +L +YLP +T+ ++ K T
Sbjct: 510 ARSRDVNAKQNQTLVEQGLLRSDQLIEITKRFILRRTNEILQQYLPPRTDLIIFCKPTAE 569
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q E + ++ + + N+ LG+ IT KK+CN L I+T E
Sbjct: 570 QVEAFHKILTEGQLNFS-NMTFNSSLGL-----ITLFKKICNSTRL----IKTDPYYEER 619
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ + + + SGKL I LS +L +K TD+K+V++SNYTQTLD+ E
Sbjct: 620 LSQVQTSSTSGKFTSGKLRILLS--------LLHELKTKTDEKVVVISNYTQTLDIIEGH 671
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
GY RLDGS K R ++V +FN + F+F+LS+K+GG GLNLIGA+RLV+FD
Sbjct: 672 CSSEGYTSARLDGSTATKTRDQIVTSFNNDPSIFVFLLSAKSGGVGLNLIGASRLVLFDN 731
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNP+ D QAM+R+ RDGQ++PCF+YR ++TG I+EK++QRQ K ALS +D D +
Sbjct: 732 DWNPSIDLQAMSRIHRDGQRRPCFIYRLVTTGCIDEKILQRQLMKIALSKKFLDSATDQS 791
Query: 654 RH----FSMSELRSLFQLEENTISDTHDKI-KCS 682
++ F EL+ LF + +T+S+THD I CS
Sbjct: 792 KNDDDLFQQEELKDLFTINLSTLSNTHDLICNCS 825
>gi|323450700|gb|EGB06580.1| hypothetical protein AURANDRAFT_71986 [Aureococcus anophagefferens]
Length = 1131
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 240/602 (39%), Positives = 340/602 (56%), Gaps = 81/602 (13%)
Query: 96 REGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGV 155
R GA + H+P LVLY P D ++ + I+V P+L LRPHQREGV
Sbjct: 149 RRGAYRE-HEP-----LVLYEP----TDDEVEAGAEVIEV----PPILCQWLRPHQREGV 194
Query: 156 KFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQ-GPLAKPLIDKAIIVAPS 214
+F++ECV G++ G I+AD+MGLGKTLQ ITL++TLL+ G K + + I+V P
Sbjct: 195 QFVFECVYGMKDYGGEGAILADDMGLGKTLQSITLLYTLLKSLGRDGKRIAKRVIVVCPC 254
Query: 215 SLVKNWCNEITKWL-------GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN--PIL 265
SLVKNW +E KW+ R+ + + ++ ++ ++ F+ P N +L
Sbjct: 255 SLVKNWQDEFEKWVNCRAKTKAERIECMALADTTRKTVEGMIDQFLS-----PANYYDVL 309
Query: 266 VISYETFRSHASVL--HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
V+SYETFR K+ L++CDE HRLKN ++QT QAL L +RRVLLSGTP+Q
Sbjct: 310 VVSYETFRMQVERFARKKDSADLIICDEAHRLKNQDAQTSQALASLACRRRVLLSGTPMQ 369
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
NDL+E+FS+ +F N GI GT +EF K YE PILRG++ ASDA + K +R QL + +
Sbjct: 370 NDLVEFFSMANFTNPGIFGTKEEFTKHYEGPILRGREPDASDAAKRKGQDRQRQLSALSD 429
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
+IRR + L +++LP K QVVC ++T Q+++Y ++I+ + ++G LG
Sbjct: 430 MFIIRRMNRLNAQHLPPKLTQVVCCRLTPTQEKMYRHVIRKRDEQAAVEGHVKDTLGY-- 487
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
I L+K+CNHP LV P G +A+ +A+L L
Sbjct: 488 ---IQRLQKICNHPALVAQ----------------PEGGSAAN------AREAAELRSL- 521
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK- 562
M DD + + G+ +L G+ + KKR + + FN
Sbjct: 522 -------MPEDDHMPRGRGGRE------------GWHSCKLGGNTSTKKRKQFNDDFNDP 562
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
S F F+LSSKAGGCGLNLIG +RLVMFD DWNPA D QA AR WRDGQK C+ YRF+
Sbjct: 563 GSGYFAFLLSSKAGGCGLNLIGGSRLVMFDLDWNPATDKQAAARCWRDGQKYQCYTYRFV 622
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
STG++EE+M+QRQ K+ L + + D + HF+ +L+ LF T SD HD+++C
Sbjct: 623 STGTLEERMLQRQLSKEGLQNVIEDKAQ--VNHFATDDLKKLFLFRPKTASDLHDELQCK 680
Query: 683 RC 684
C
Sbjct: 681 AC 682
>gi|336371187|gb|EGN99526.1| hypothetical protein SERLA73DRAFT_72346 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383951|gb|EGO25099.1| hypothetical protein SERLADRAFT_436866 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1121
Score = 409 bits (1051), Expect = e-111, Method: Compositional matrix adjust.
Identities = 243/624 (38%), Positives = 351/624 (56%), Gaps = 63/624 (10%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LHDP A+V+ P + ++ K K+ V VV+DP+++ LRPHQ EGV+F+Y+CV
Sbjct: 346 LHDPEVEGAIVMKAPTKEHSNKYNK--KNLPIVPVVLDPIIARYLRPHQVEGVRFLYDCV 403
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--KPLIDKAIIVAPSSLVKNW 220
G+R + GCI+ADEMGLGKTLQ I L+WTLL+Q P A P+I KA+IV P SLV NW
Sbjct: 404 MGLRKHEGQGCILADEMGLGKTLQTIMLVWTLLKQNPYAGVGPVIGKALIVCPVSLVNNW 463
Query: 221 CNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQ------------TYGRRPVNPILVIS 268
E KWLG + KA I +NS ++ + RR ++ +L+I
Sbjct: 464 RAEFHKWLGRDRVGVFTGDKDKAVIKQFINSCVKLLLWLSPIKNRRAHYRR-IHQVLIIG 522
Query: 269 YETFRSH-ASVLHKN-EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
YE R+ A + + N +GL++CDEGHRLK+ ++T L+ RR++LSGTPIQNDL
Sbjct: 523 YERLRTVIADLAYCNPPIGLIICDEGHRLKSANNKTSTMFRALRTPRRIILSGTPIQNDL 582
Query: 327 LEYFSLVHFV----------------NQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
E+ ++V F+ N G+L FR+ YE PILR + +D +
Sbjct: 583 SEFHAMVRFIFSSEFFLLDKAQADFCNPGLLDDYTTFRRVYEVPILRSRAPDCTDKDTEI 642
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
R QL I ++RR + +L YLP K E VV + T LQ +++ ++ +D +
Sbjct: 643 GEARSSQLSTIAKSFVLRREATILKNYLPPKHEYVVFVTPTRLQLSIFSTILNADKLDNI 702
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLV---MDKIQTGAD------GFENAMNILPTG 481
++ L + I L K+ N P L+ DK + + G E A+ +LP G
Sbjct: 703 IQSSTAESLAL-----INVLTKVSNSPILLKATADKAKALGNNSFKQRGIEEALKLLP-G 756
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
+A LS KL L +L I+ TD+K ++VS+YT TL++ E + Y Y
Sbjct: 757 HAQIED-----FSLSGKLSALSNLLKTIREYTDEKCIIVSHYTSTLNIIEAFCMKKSYTY 811
Query: 542 VRLDGSMTIKKRAKVVETFNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
RLDG KR + V FNK+S + F+F+LSSKAGG GLNLIGA+RL + D DWNP++
Sbjct: 812 FRLDGQTPAAKRQEYVNIFNKSSQYSRFLFLLSSKAGGVGLNLIGASRLCLIDSDWNPSH 871
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR--HFS 657
D Q+MAR+ RDGQK+P F+YRFL+ EK+ QRQ K LS+ ++ ++ FS
Sbjct: 872 DLQSMARIHRDGQKRPVFIYRFLTA----EKIYQRQVTKIGLSNSLMGSGTSGSKSDSFS 927
Query: 658 MSELRSLFQLEENTISDTHDKIKC 681
+LR +F++ NT +THD ++C
Sbjct: 928 RKDLRDIFRIHPNTACNTHDLLEC 951
>gi|320583294|gb|EFW97509.1| helicase [Ogataea parapolymorpha DL-1]
Length = 794
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 237/588 (40%), Positives = 345/588 (58%), Gaps = 39/588 (6%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
+LHD AP+ALVL PP D ++ VVVDPVL+ LRPHQ+EGVKFMYEC
Sbjct: 151 SLHDAMAPDALVLPRPPN--------ADSSAVR-DVVVDPVLAENLRPHQKEGVKFMYEC 201
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--KPLIDKAIIVAPSSLVKN 219
V G R D +G ++AD MGLGKTLQ I L+WTLL+Q P+A P+ K +I P +LV N
Sbjct: 202 VMGFRDYDGHGVLLADSMGLGKTLQTIALVWTLLKQSPVAGDAPVARKVLICCPVTLVMN 261
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG RV+ L ++G S + N +Q + V +++I YE + A
Sbjct: 262 WKKEFRKWLGPNRVSILALNGSSNNDKQN-----IQGFANTNVYHVMIIGYEKMLTVADD 316
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + LV+CDEGHRLK+ ++ + L L K RVLLSGTPIQNDL E++++ +FVN
Sbjct: 317 VGCIKFDLVVCDEGHRLKSGSNKVLKVLESLDIKHRVLLSGTPIQNDLTEFYNVANFVNP 376
Query: 339 GILGTAQEFRKQYETPILRGQDS-CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY 397
G+LG + F++ Y PILR +++ C + A + +LI + + +RRT ++K+
Sbjct: 377 GVLGDFKSFQRSYMRPILRAREANCTNAAVLEQGEAASRELIELTKKFTLRRTIEEITKF 436
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LP +++ V+ T LQ L+ +L K+ + + +L IT+ +K+CN P
Sbjct: 437 LPRRSDYVLFAPPTKLQIRLFESLQKTAQFSKILSAAPAND----SLQLITTFRKICNSP 492
Query: 458 DLVM-DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
L+ D + G G ++ L + SAK+++L +L I +K
Sbjct: 493 ALLTEDAMFAGLCGVDDLRGELGSKVR------------SAKIILLVKLLKGIYKLKQEK 540
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSK 574
+V+VSN+TQTLD+ E+L + + RLDG+ R K+V FNK S + F+F+LS+K
Sbjct: 541 VVVVSNFTQTLDVLEKLMNVLELPFTRLDGATPANLRDKIVSDFNKASWDMSFVFLLSAK 600
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
+GG GLNL+GA+RL++FD DWNPA D QAMARV RDGQ +P VYR L+ G I+EK+ QR
Sbjct: 601 SGGMGLNLVGASRLILFDNDWNPAVDLQAMARVHRDGQTRPVHVYRLLTAGCIDEKIFQR 660
Query: 635 QAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKC 681
Q K +LS +D D + F ++L+ LF + + S+TH + C
Sbjct: 661 QLIKTSLSDKFLDDSTDSNENFFDTTDLKDLFSVSQVN-SNTHMLLDC 707
>gi|254585925|ref|XP_002498530.1| ZYRO0G12474p [Zygosaccharomyces rouxii]
gi|238941424|emb|CAR29597.1| ZYRO0G12474p [Zygosaccharomyces rouxii]
Length = 901
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 251/605 (41%), Positives = 353/605 (58%), Gaps = 88/605 (14%)
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV-----------------RIEDAYGCI 174
+ V VVVDP+LS +LRPHQR+GVKFMY+CV G+ D GCI
Sbjct: 221 RADVDVVVDPMLSKLLRPHQRDGVKFMYDCVMGLARPDDGIDTASKSLVLENDSDIQGCI 280
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLA------------KPLIDKAIIVAPSSLVKNWCN 222
+ADEMGLGKTL ITL+WTLL+Q P+A + L K IIV P +L+ NW
Sbjct: 281 LADEMGLGKTLMTITLIWTLLKQTPMASKVSCSQNGVPLQGLCKKIIIVCPVTLIANWKR 340
Query: 223 EITKWLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E KWL R+ L + + AE D + SF++ + +L+I YE S A L
Sbjct: 341 EFGKWLNLSRIGILTLSPQNNAERDIYDVKSFLRV---QRTYQVLIIGYEKLLSVAQELE 397
Query: 281 --KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
KN + L++CDEGHRLKN S+ L L+ R+++LSGTPIQNDL E+F+++ F+N
Sbjct: 398 NGKNLIDLLVCDEGHRLKNGSSKVLNILKNLEIPRKIILSGTPIQNDLNEFFTIIDFINP 457
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAER------TKANERLEQLIGIVNRCLIRRTSA 392
G+LG+ F+K++ TPI + +D A R K ER E++I I R ++RRT++
Sbjct: 458 GVLGSYPFFKKRFMTPITKARDP----ANRFNLHVVEKGQERSEEMISITRRFILRRTNS 513
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM----TALSSIT 448
+LSKYLP K + ++ K T+ Q + ++++ G N L ++L+ IT
Sbjct: 514 ILSKYLPPKMDIILFCKPTNHQISAFKDILQ----------GANIDLQRLNFNSSLALIT 563
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAM--NILPTGYAASYKSGKLLIELSAKLMVLDTML 506
LKK+CN P L IQT + ++++M + + Y Y SGKL VL +L
Sbjct: 564 LLKKICNSPTL----IQTDS-YYKSSMQNSRISQKYQNEYNSGKL--------RVLMKLL 610
Query: 507 AVIKM-TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
IK+ TT DK+V++SNYTQTLD+ E L G RLDGS K+R +V FN +
Sbjct: 611 NQIKIETTSDKVVVISNYTQTLDIIENLMASAGMSSCRLDGSTPAKQRDAIVNNFNHNPS 670
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
F F+LS+K+GG GLNLIGA RL++FD DWNP+ D QAM+R+ RDGQKKPC++YR ++TG
Sbjct: 671 IFAFLLSAKSGGVGLNLIGACRLILFDNDWNPSVDLQAMSRIHRDGQKKPCYIYRLVTTG 730
Query: 626 SIEEKMMQRQAHKKALS--------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHD 677
I+EK++QRQ K LS S ++D+ F+ +L+ LF + +T S+THD
Sbjct: 731 CIDEKILQRQLMKNCLSQKFLSDTKSTKGSADDDL---FNKEDLKDLFTVLVDTPSNTHD 787
Query: 678 KIKCS 682
I CS
Sbjct: 788 LI-CS 791
>gi|292630891|sp|B5VE38.1|RDH54_YEAS6 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|207347718|gb|EDZ73802.1| YBR073Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 924
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 348/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRIYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLRVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|156037672|ref|XP_001586563.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980]
gi|154697958|gb|EDN97696.1| hypothetical protein SS1G_12550 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 938
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 252/615 (40%), Positives = 352/615 (57%), Gaps = 60/615 (9%)
Query: 75 FKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ 134
FK P+L +T + + G HDP+ P A+V+ P + + K K
Sbjct: 245 FKNPLL-------ATTVMPQNKNGLPTPRHDPSVPGAIVMQRP------NPKHLAKGKDV 291
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VVVDP L LR HQ+EGVKF+YECV G R + G I+ADEMGLGKTLQ I L+WTL
Sbjct: 292 VDVVVDPFLGRHLRDHQKEGVKFLYECVMGYRSFNGQGAILADEMGLGKTLQTIALLWTL 351
Query: 195 LRQGPLAKP----LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
L+Q P P +I KA+IV P +L+ NW E KWLG + + GSK + +L
Sbjct: 352 LKQNP-EHPNEGGVIKKALIVCPVTLIANWKAEFNKWLGNERIGVFVADGSK---NIRLT 407
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGL 309
F T+G+ +++I YE R+ L K + +V+ DEGHRLK +++ QA+ L
Sbjct: 408 DF--THGKS--YSVMIIGYEKLRTVQEELKKGGGIDIVVADEGHRLKTAANKSAQAIRNL 463
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RRV+LSGTPIQNDL E+F++V FVN G+L F+K +E PIL+ + A++ +
Sbjct: 464 NTERRVILSGTPIQNDLSEFFTMVDFVNPGLLNGYNTFKKCFEAPILKSRQPGATENDME 523
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K R E+L + ++RR +++L+KYL KTE V+ K T Q E+Y +++ S R
Sbjct: 524 KGTAREEELADLTKLFILRRNASILAKYLKPKTEYVLFCKPTQAQAEVYQHVLASPVFGR 583
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ E +L IT LKK+CN P L++ K T N
Sbjct: 584 VLGSSE------ASLQLITMLKKVCNAPSLLVKKSDTDTPSNSNV--------------A 623
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF-ERLSKLRGYKYVRLDGSM 548
+LL + +++ + ++A I LVSNYT TLDL LS L ++RLDGS
Sbjct: 624 QLLESIPPEILKKNIVVASI---------LVSNYTSTLDLLMSHLSSLN-LPFLRLDGST 673
Query: 549 TIKKRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
KR +V TFNKT S F F+LS+K+GG G+NLIGA+RLV+FD DWNPA D QAMAR
Sbjct: 674 PQAKRQDLVNTFNKTPASKYFAFLLSAKSGGAGINLIGASRLVLFDVDWNPATDLQAMAR 733
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
+ RDGQK+ +YRFL +G ++EK+ QRQ K L+ V+D +++ A FS ELR LF+
Sbjct: 734 IHRDGQKRSVKIYRFLMSGGMDEKIYQRQVTKIGLADSVMDGKKNEA-SFSADELRDLFR 792
Query: 667 LEENTISDTHDKIKC 681
L+ N TH+ + C
Sbjct: 793 LDMNARCQTHELLGC 807
>gi|443896932|dbj|GAC74275.1| DNA repair protein [Pseudozyma antarctica T-34]
Length = 1029
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 234/588 (39%), Positives = 342/588 (58%), Gaps = 29/588 (4%)
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
DP P A+V+ P + H K V VV+DP L+ LRPHQ EGVKF+YE V G
Sbjct: 285 DPNEPGAIVMKRPD--AGHQERHNPKGLPVVDVVLDPQLAKALRPHQIEGVKFLYERVMG 342
Query: 165 VRI--EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL---IDKAIIVAPSSLVKN 219
+ E G I+ADEMGLGKTLQ I L+ TLL+Q P I++AIIV P +LVKN
Sbjct: 343 MHADGEKGQGAILADEMGLGKTLQTIALVLTLLKQSCYYTPASCTIERAIIVCPLTLVKN 402
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KW+G + L ID G + + F+++ +LVI YE R+ +
Sbjct: 403 WKREFKKWIGTNALNVLCIDEGRGRQ---DVARFVRSRSYH----VLVIGYEKLRTCKDL 455
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
VGL++CDEGHRLK+ E++T Q L A+R+++LSGTPIQNDL E+F+++ FV
Sbjct: 456 FKDAPVGLIVCDEGHRLKSKEAKTTQMFDELSAERKIILSGTPIQNDLSEFFAMIDFVAP 515
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+L + F+K +E PI+R + S + R L+ I N ++RRT+ +LS +L
Sbjct: 516 GMLNSYASFKKIFEEPIMRSRAQHCSKHTKATGQARASALMTITNDIILRRTADILSNFL 575
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P K E V+ + Q +Y +++ S+ VR ++G L I L+KLCN P+
Sbjct: 576 PPKKEMVLFCSPSPEQIRIYQSILASNDVRSLLRGDAG-----NGLLQIGVLRKLCNTPE 630
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLL---IELSAKLMVLDTMLAVIKMTTDD 515
L++ + ADG ++ G A Y + S KL+ + +L ++ TDD
Sbjct: 631 LLLRDSE--ADGASATKALV--GDMARYFPPNFVRNDARFSGKLVCVMQLLEKLRAETDD 686
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFMLSS 573
K+VLVSN+T TLD+ E + + + Y Y+RLDG +R +V FN+ + F+F+LS+
Sbjct: 687 KVVLVSNFTSTLDIVEAMMRKKRYSYLRLDGKTPQDERMDMVNQFNRDGVDSSFVFLLSA 746
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
K+GG GLNLIGANRLV+ D DWNP+ D QAMAR+ RDGQKK C++YR L +G+++EK+ Q
Sbjct: 747 KSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKVCYIYRLLLSGTMDEKIYQ 806
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
RQ K L+ ++ ++ + FS ELR +F L ++ +H ++ C
Sbjct: 807 RQISKLGLTDSLIKGDKSSSDTFSQEELRDIFTLHLDSPCISHRQLVC 854
>gi|403217811|emb|CCK72304.1| hypothetical protein KNAG_0J02230 [Kazachstania naganishii CBS
8797]
Length = 929
Score = 407 bits (1047), Expect = e-110, Method: Compositional matrix adjust.
Identities = 242/632 (38%), Positives = 363/632 (57%), Gaps = 79/632 (12%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGV------------------RIEDAYGCIMA 176
V V+VDP+L +R HQREGVKF+Y+CV G+ + D GC++A
Sbjct: 250 VDVIVDPLLGKHMRNHQREGVKFIYDCVMGLLRTKEVPLDVVDRSLILEKDSDINGCLLA 309
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAK---------PL---IDKAIIVAPSSLVKNWCNEI 224
D+MGLGKTL ITL+WTLL+Q P A PL K +IV P +L+ NW E
Sbjct: 310 DDMGLGKTLMTITLIWTLLKQTPYASKVECSQSGVPLQGTCKKVLIVCPVTLIGNWTKEF 369
Query: 225 TKWLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRS-----HAS 277
KWLG RV L + + ++D N + +F++ + +L+I YE + +
Sbjct: 370 HKWLGHNRVGLLTLHPNNTPDMDRNAVKNFLRV---QRTYQVLIIGYEKLLNLSEELQSK 426
Query: 278 VLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
++ N + L++CDEGHRLKN S+ L L KR+VLLSGTPIQNDL E+++++ F+N
Sbjct: 427 QINMNRIDLLVCDEGHRLKNSSSKVLNVLKELDVKRKVLLSGTPIQNDLTEFYTIIDFIN 486
Query: 338 QGILGTAQEFRKQYETPILRGQDSCA--SDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D +D + ER +++I I N ++RRT+ +L+
Sbjct: 487 PGILGSFNNFKRKFIVPITRARDVANKFNDDVQEVGEERSKEIIEITNTFILRRTNDILT 546
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLI---KSDAVRRTMKGGENTKLGMTALSSITSLKK 452
KYLP KTE ++ K + +Q +++ ++ K D T+ N+ LG+ IT +KK
Sbjct: 547 KYLPPKTEVILFCKPSKVQLDVFYAILNHSKLDFGSLTV----NSSLGL-----ITLMKK 597
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILP---TGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
+CN P L+ + D + + P Y ++ SGKL VL +L I
Sbjct: 598 ICNSPSLLKN------DPYYCKILKTPEKNIQYLSALDSGKL--------RVLSAILNQI 643
Query: 510 KMT-TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
+ T +++K+V+VSNYTQTLD+ + + Y RLDGS K+R ++ +FNK F
Sbjct: 644 RTTGSEEKVVIVSNYTQTLDIIQNVLNSNKMVYCRLDGSTAQKERDAIINSFNKNPAVFA 703
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LS+K+GG GLNLIGA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+
Sbjct: 704 FLLSAKSGGVGLNLIGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCID 763
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARH------FSMSELRSLFQLEENTISDTHDKIKCS 682
EK++QRQ K +LS +D D A+ F+ EL+ LF + +T+S+THD I C+
Sbjct: 764 EKVLQRQLMKHSLSQKFLDNSNDTAKRGSNDDLFTKEELKDLFTISSDTLSNTHDLI-CT 822
Query: 683 RCVNGIQVKPPPLESDCTDDLSCWHHVTEKRW 714
NG + E + D+L + +W
Sbjct: 823 CDGNGEDILIEEQEMETADELERKERASLSQW 854
>gi|242023203|ref|XP_002432025.1| DNA repair and recombination protein RAD54B, putative [Pediculus
humanus corporis]
gi|212517383|gb|EEB19287.1| DNA repair and recombination protein RAD54B, putative [Pediculus
humanus corporis]
Length = 840
Score = 407 bits (1046), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/550 (41%), Positives = 331/550 (60%), Gaps = 41/550 (7%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V ++ LS LR HQ EG+ F+YE + G + + G I+ADEMGLGKTLQCI+L+WTLL+
Sbjct: 242 VYIEESLSKKLRQHQLEGIIFLYESIMGYKDINYNGVILADEMGLGKTLQCISLIWTLLK 301
Query: 197 QGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
QGP KP+I + +IV P+SL+ NW NE KWLG RV +P K NK +
Sbjct: 302 QGPYNKKPVIKRVLIVTPTSLIMNWYNEFIKWLG-RVKIVPYVVNQK----NKPSEI--- 353
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+ +++ISYE + + ++ V L++CDE HR+KN +T Q L L K+++
Sbjct: 354 ----KYHSVVIISYEMLIRCVNNVMEHNVDLLVCDEAHRIKNSNIKTAQVLNQLNCKKKI 409
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
LL+GTP+QNDL E ++L+ F N ILG+ +FR Q+ PI+ + +++ K NER
Sbjct: 410 LLTGTPLQNDLQELYTLIDFANPNILGSPSQFRIQFADPIIASRQPDSNEDVVKKGNERS 469
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L I+N+ L+RRT +L YLP + + VV K+T+ Q+ +Y +L+ S K E
Sbjct: 470 INLKKIINKFLLRRTRNILKNYLPPRHDIVVFCKITEPQRNMYNSLVNSFL---NAKESE 526
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
G + L ITSLKK+CN+P L+ + +N + K+ I+
Sbjct: 527 EFIEGSSHLELITSLKKICNYPSLL--------NKDDNYLE-------------KIDIDT 565
Query: 496 SAKLMVLDTMLAVIKMTT-DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
S KL V L ++MT+ +K+++VSN TQTL+L E++ + Y RLDG+ +R
Sbjct: 566 SGKLKVTVNFLKELQMTSVKEKVLIVSNATQTLNLLEKVFHVLNYSTCRLDGNTPSAQRN 625
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
K+VE FN + + FIF+LSSKAGG GLN+ GA+RL++FD DWNPA D QA++R+WRDGQK
Sbjct: 626 KIVEDFNTSRDLFIFLLSSKAGGVGLNVTGASRLILFDSDWNPATDLQAISRIWRDGQKF 685
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL-FQLEENTIS 673
P F+YR L+TG+IEEK+ QRQ K+ L VD + + + S EL+ L F EE I
Sbjct: 686 PVFIYRLLTTGTIEEKIYQRQISKQGLCEGTVDPKSNKSIKLSKEELKELFFPCEEKDIK 745
Query: 674 D--THDKIKC 681
D THD + C
Sbjct: 746 DCLTHDSLSC 755
>gi|170032260|ref|XP_001844000.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
gi|167872116|gb|EDS35499.1| DNA repair and recombination protein RAD54 [Culex quinquefasciatus]
Length = 821
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/551 (42%), Positives = 334/551 (60%), Gaps = 36/551 (6%)
Query: 152 REGVKFMYECVTGVRIEDA--YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
REGV F+YECV G++ ED+ +G I+ADEMGLGKTLQ + L++TL++QGP +P++ + +
Sbjct: 232 REGVSFLYECVLGMKREDSEQFGAILADEMGLGKTLQTLALIYTLMKQGPYGQPIVKRVL 291
Query: 210 IVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISY 269
IV PSSLV NW EITKWL I G +NKL + Q+ PIL+ISY
Sbjct: 292 IVTPSSLVDNWDREITKWLKQERIYTFIVGP-----NNKLKKYAQSAHI----PILIISY 342
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
E S L + L++CDEGHRLKN + + L G+ +RR+LL+GTPIQNDL E+
Sbjct: 343 ELLAKQVSELETVKFDLIVCDEGHRLKNSSIKIAEVLDGIDCRRRILLTGTPIQNDLQEF 402
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
SL++FVN G+LGT EF+ +YE PI++ Q + RL +L I + ++RR
Sbjct: 403 HSLINFVNPGLLGTYSEFKAKYENPIVQSQQPNVLPQLQELGQTRLNELNSITSSFILRR 462
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
T + + YLP K E V+ ++LQ+ L T A++ + G + +T L IT
Sbjct: 463 TQEVNNSYLPEKQELVIFAHPSELQERLLTL-----ALKHYEQSGTS---AITPLQLITI 514
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAM-NILPT-GYAASYKSGKLLIELSAKLMVLDTMLA 507
LKK+CNHP L+ D +N + + LP+ + SGKL I L+++L
Sbjct: 515 LKKICNHPSLISTTDSKDPDSLQNLLISQLPSWQHMGPADSGKLAI--------LESLLE 566
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE- 566
+ + +K+V+VS +++TLD+ L + YK+ RLDG+ + R K+V TFN S++
Sbjct: 567 AL-IERREKVVIVSYFSKTLDMIAGLCEHYNYKFCRLDGATPSQDRGKLVATFNNPSSDI 625
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
FIF+LS+KAGG GLNL+GA+RLV+FD DWNPA+D QAM+R+WRDGQ + F+YR ++ S
Sbjct: 626 FIFLLSAKAGGIGLNLVGASRLVLFDNDWNPASDLQAMSRIWRDGQTRNVFIYRLITAFS 685
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQL-EENTISD--THDKIKCS 682
IEEK+ QRQ K +LS VVD +++++ S EL+ LF L EE+ D TH + C
Sbjct: 686 IEEKIFQRQISKTSLSGSVVDQKQNLSNLKLSDDELKDLFSLVEEDDREDCLTHQMLSC- 744
Query: 683 RCVNGIQVKPP 693
C V P
Sbjct: 745 ECAGSGDVPEP 755
>gi|398364627|ref|NP_009629.6| DNA-dependent ATPase RDH54 [Saccharomyces cerevisiae S288c]
gi|341942271|sp|P38086.4|RDH54_YEAST RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|329136720|tpg|DAA07193.2| TPA: DNA-dependent ATPase RDH54 [Saccharomyces cerevisiae S288c]
Length = 958
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 283 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 342
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 343 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 402
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 403 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 459
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 460 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 519
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 520 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 579
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 580 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 629
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 630 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 678
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 679 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 738
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 739 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 798
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 799 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 854
>gi|292630870|sp|A6ZL17.1|RDH54_YEAS7 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|151946464|gb|EDN64686.1| rad54-like protein [Saccharomyces cerevisiae YJM789]
Length = 924
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLRVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|292630869|sp|B3LN76.1|RDH54_YEAS1 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|190408764|gb|EDV12029.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 924
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGRLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLRVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|292630874|sp|C7GQI8.1|RDH54_YEAS2 RecName: Full=DNA repair and recombination protein RDH54; AltName:
Full=RAD homolog 54; AltName: Full=Recombination factor
TID1; AltName: Full=Two hybrid interaction with DMC1
protein 1; Includes: RecName: Full=DNA topoisomerase;
Includes: RecName: Full=Putative helicase
gi|256271911|gb|EEU06936.1| Rdh54p [Saccharomyces cerevisiae JAY291]
Length = 924
Score = 407 bits (1045), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLKKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|365767123|gb|EHN08611.1| Rdh54p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 924
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|349576451|dbj|GAA21622.1| K7_Rdh54p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392300911|gb|EIW12000.1| Rdh54p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 924
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|241952408|ref|XP_002418926.1| dna repair and recombination protein rdh54, putative [Candida
dubliniensis CD36]
gi|223642265|emb|CAX44234.1| dna repair and recombination protein rdh54, putative [Candida
dubliniensis CD36]
Length = 882
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/592 (38%), Positives = 343/592 (57%), Gaps = 53/592 (8%)
Query: 100 RKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY 159
RK L+ +P+A+ L PP K K V V VDP LS +LRPHQ EGV+FMY
Sbjct: 231 RKPLYQ-DSPDAIALPPPP-----------KSKDYVTVNVDPHLSKVLRPHQVEGVRFMY 278
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL---AKPLIDKAIIVAPSSL 216
EC+ G R D GC++ADEMGLGKTL IT +WTLL+Q P +++K ++V P +L
Sbjct: 279 ECLMGYRDFDGNGCLLADEMGLGKTLMTITTIWTLLKQNPFLDQKNAVVNKVLVVCPVTL 338
Query: 217 VKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
+ NW E KWLG ++ L ++ E + LN +G+ V +LV++YE +H
Sbjct: 339 ISNWRQEFKKWLGANKLNVLTLNNAMTNEKRDILN-----FGKLNVYQVLVVNYEKIMAH 393
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
L L++CDEGHRLKN ++ L+ L ++V+L+GTPIQN+L+E+ +L+ F
Sbjct: 394 FDELSTVSFDLLVCDEGHRLKNSANKVLNNLIKLNIPKKVVLTGTPIQNELVEFHTLISF 453
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL-EQLIGIVNRCLIRRTSALL 394
+N +L + F++ + TPI R +D D E K E + +QLI + ++RRT ++L
Sbjct: 454 LNPKVLPELKLFQRNFITPISRARDVNCFDPEVKKRGEEISQQLIKLTQSFILRRTQSIL 513
Query: 395 SKYLPVKTEQVVCIKMTDLQKELY---TNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+ YL KT+ ++ + T Q EL+ TNL K + G + + I K
Sbjct: 514 ANYLTQKTDILLFVPPTSSQLELFNYITNLKKFNQFNS----------GSDSFTMINLFK 563
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P L+ D E I+ + SGKL I ++ +L ++ +
Sbjct: 564 KICNSPSLLADD--------EFFKKIVEQKFNLGMSSGKLNI-------LVPLLLEIVSL 608
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
+KIVL+SNYT+TLDL E + + + RLDGS R+K+V FN + +F+L
Sbjct: 609 --KEKIVLISNYTKTLDLLETVLRKINLTFSRLDGSTPNNVRSKLVNQFNTNPDINVFLL 666
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSK+GG G+NL+GA+RL++FD DWNPA D Q+M+R+ RDGQ KPCF+YR +TG I+EK+
Sbjct: 667 SSKSGGMGINLVGASRLILFDNDWNPATDLQSMSRIHRDGQVKPCFIYRLFTTGCIDEKI 726
Query: 632 MQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCS 682
QRQ K LSS +D + F +L+++F+++ +TIS+THD ++CS
Sbjct: 727 FQRQLVKNKLSSKFLDNDSSSKSDVFDSEDLKNIFEIDTSTISNTHDLLECS 778
>gi|290878090|emb|CBK39149.1| Rdh54p [Saccharomyces cerevisiae EC1118]
Length = 924
Score = 406 bits (1044), Expect = e-110, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>gi|354548230|emb|CCE44967.1| hypothetical protein CPAR2_407700 [Candida parapsilosis]
Length = 826
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 230/601 (38%), Positives = 350/601 (58%), Gaps = 53/601 (8%)
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
+RK L+D + L PP L +H V V +DP+L++ LRPHQ EGV F+
Sbjct: 179 SRKPLYDENR-DIFTLTPPPNLLSH-----------VSVRIDPILASKLRPHQLEGVTFL 226
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA---KPLIDKAIIVAPSS 215
YEC+ G R +GC++ADEMGLGKTL IT +WTLL+Q P KP+++K ++V P +
Sbjct: 227 YECLMGFRDFKGHGCLLADEMGLGKTLMTITTIWTLLKQNPYPDQKKPIVNKVLVVCPVT 286
Query: 216 LVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
L+ NW E KWLG +V L ++ + + +N +G+ V +L+I+YE +
Sbjct: 287 LINNWREEFNKWLGLNKVNVLTLNNPVSDDKRDIIN-----FGKLNVYQVLIINYEKVIA 341
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
H L L++CDEGHRLKN ++ L L ++++L+GTPIQN L+E+++LV
Sbjct: 342 HYEELSTISFDLLVCDEGHRLKNSANKVMINLTKLNIPKKIVLTGTPIQNYLVEFYTLVS 401
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ-LIGIVNRCLIRRTSAL 393
F+N +L + F+K++ PI R +D + E K E + Q LI + ++ ++RRT A+
Sbjct: 402 FLNPHVLPDMKTFQKEFINPISRARDVNCFNQEIKKQGEEMSQRLISLTHKFILRRTQAI 461
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L YL KT+ ++ + T LQ +L+ ++ KS+ ++ G +LS I +K+
Sbjct: 462 LENYLTNKTDILLFVPPTQLQLDLFDSIKKSEKFQQLDSGA-------ISLSLINLFRKI 514
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL--LIELSAKLMVLDTMLAVIKM 511
CN P L+ +D F NI S SGKL LI L V+++
Sbjct: 515 CNSPSLL------ASDDFYK--NITDGSLKLSTSSGKLNALIPL------------VLEI 554
Query: 512 TTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFM 570
T +K+VL+SNYT TLDL E + K +Y+RLDGS R K+V FNK + +F+
Sbjct: 555 TAQKEKLVLISNYTTTLDLLETVIKKLNLQYLRLDGSTPNNMRGKLVNKFNKDESISVFL 614
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSK+GG G+NL+GA+RL+++D DWNP+ D Q+M+R+ RDGQ KPC++YR +TG I+EK
Sbjct: 615 LSSKSGGTGINLVGASRLILYDNDWNPSTDLQSMSRIHRDGQMKPCYIYRLFTTGCIDEK 674
Query: 631 MMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
+ QRQ K LSS +D + F S+L++LF+++ +T S+THD + C +G
Sbjct: 675 IFQRQLMKNKLSSKFLDNDASSKSDVFDYSDLKNLFEIDVDTKSNTHDLLGCCCAGDGFM 734
Query: 690 V 690
+
Sbjct: 735 L 735
>gi|68477713|ref|XP_717169.1| hypothetical protein CaO19.5367 [Candida albicans SC5314]
gi|68477876|ref|XP_717090.1| hypothetical protein CaO19.12827 [Candida albicans SC5314]
gi|46438788|gb|EAK98114.1| hypothetical protein CaO19.12827 [Candida albicans SC5314]
gi|46438870|gb|EAK98195.1| hypothetical protein CaO19.5367 [Candida albicans SC5314]
Length = 796
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 246/683 (36%), Positives = 373/683 (54%), Gaps = 68/683 (9%)
Query: 54 PMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
PM K + NL I P+++ L+ G ST R K + PTA +
Sbjct: 104 PMGKRVFTATPNLDDVISVGPYELE-LDEKVGSNSTSQTVTRVTHQFKKVAPPTASSRKP 162
Query: 114 LYT--------PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV 165
LY PP A D +K++ +DP L+ +LRPHQ EGVKFMYEC+ G
Sbjct: 163 LYDDCADAIALPPPPKAKDYVKVN---------IDPHLAKVLRPHQVEGVKFMYECLMGY 213
Query: 166 RIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWCNE 223
R +GC++ADEMGLGKTL IT +WTLL+Q P + +++K ++V P +L+ NW E
Sbjct: 214 RGFGGHGCLLADEMGLGKTLMTITTIWTLLKQNPFMEKGAVVNKVLVVCPVTLISNWRQE 273
Query: 224 ITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
KWLG ++ L ++ E + LN +G+ V +LV++YE +H L
Sbjct: 274 FRKWLGANKLNVLTLNNPMSNEKQDILN-----FGKLNVYQVLVVNYEKLVAHFDELSAV 328
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
+ L++CDEGHRLKN ++ L+ L ++++L+GTPIQN+L+E+ +L+ F+N G+L
Sbjct: 329 KFDLLVCDEGHRLKNSANKVLNNLIKLNIPKKIVLTGTPIQNELVEFHTLISFLNPGVLP 388
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERL-EQLIGIVNRCLIRRTSALLSKYLPVK 401
+ F++ + TPI R +D D E K E + +QLI + ++RRT A+L+ YL K
Sbjct: 389 ELKLFQRNFITPISRARDINCFDPEVKKRGEEISQQLIELTQSFILRRTQAILANYLTQK 448
Query: 402 TEQVVCIKMTDLQKELY---TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
T+ ++ + T LQ +L+ TNL K + A + I KK+CN P
Sbjct: 449 TDILLFVPPTSLQLKLFDYITNLKKFNQFE--------------AFTMINLFKKICNSPS 494
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ D E I+ + SGK+ I + L + + +KIV
Sbjct: 495 LLADD--------ELFKKIVEEKFNLGMASGKINILVPLLLEI---------ASLGEKIV 537
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGC 578
L+SNYT+TLDL E++ + + RLDGS R+K+V FN + +F+LSSK+GG
Sbjct: 538 LISNYTKTLDLLEQVLRKVSLTFSRLDGSTPNNVRSKLVNQFNTNPDINVFLLSSKSGGM 597
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NL+GA+RL++FD DWNPA D Q+M+R+ RDGQ KPCF+YR +TG I+EK+ QRQ K
Sbjct: 598 GINLVGASRLILFDNDWNPATDLQSMSRIHRDGQLKPCFIYRLFTTGCIDEKIFQRQLVK 657
Query: 639 KALSSCVVD----CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPP 694
LSS +D + DV F +L+++F+++ +TIS+THD ++C +G + P
Sbjct: 658 NKLSSKFLDNDATSKSDV---FDNDDLKNIFEIDTSTISNTHDLLECVCEGDGSMLSQPT 714
Query: 695 LESDCTDDLSCWHHVTEKRWLVD 717
+E W E + +D
Sbjct: 715 IEESEPPPKQAWVTALELKKKID 737
>gi|238883925|gb|EEQ47563.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 785
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 236/631 (37%), Positives = 359/631 (56%), Gaps = 62/631 (9%)
Query: 98 GARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKF 157
+RK L+D P+A+ L PP+ A D +K++ VDP L+ +LRPHQ EGVKF
Sbjct: 147 SSRKPLYD-DCPDAIALPPPPK--AKDYVKVN---------VDPHLAKVLRPHQVEGVKF 194
Query: 158 MYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSS 215
MYEC+ G R +GC++ADEMGLGKTL IT +WTLL+Q P + +++K ++V P +
Sbjct: 195 MYECLMGYRGFGGHGCLLADEMGLGKTLMTITTIWTLLKQNPFMEKGAVVNKVLVVCPVT 254
Query: 216 LVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
L+ NW E KWLG ++ L ++ E + LN +G+ V +LV++YE +
Sbjct: 255 LISNWRQEFRKWLGANKLNVLTLNNPMSNEKSDILN-----FGKLNVYQVLVVNYEKLVA 309
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
H L + L++CDEGHRLKN ++ L+ L ++++L+GTPIQN+L+E+ +L+
Sbjct: 310 HFDELSTVKFDLLVCDEGHRLKNSANKVLNNLIKLNIPKKIVLTGTPIQNELVEFHTLIS 369
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL-EQLIGIVNRCLIRRTSAL 393
F+N G+L + F++ + TPI R +D D E K E + +QLI + ++RRT A+
Sbjct: 370 FLNPGVLPELKLFQRNFITPISRARDINCFDPEVKKRGEEISQQLIELTQSFILRRTQAI 429
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELY---TNLIKSDAVRRTMKGGENTKLGMTALSSITSL 450
L+ YL KT+ ++ + T LQ +L+ TNL K + A + I
Sbjct: 430 LANYLTQKTDILLFVPPTSLQLKLFDYITNLKKFNQFE--------------AFTMINLF 475
Query: 451 KKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIK 510
KK+CN P L+ D E I+ + SGK+ I + L +
Sbjct: 476 KKICNSPSLLADD--------EFFKKIVEEKFNLGMASGKINILVPLLLEI--------- 518
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFM 570
+ +KIVL+SNYT+TLDL E++ + + RLDGS R K+V FN + +F+
Sbjct: 519 ASLGEKIVLISNYTKTLDLLEQVLRKVSLTFSRLDGSTPNNVRNKLVNQFNTNPDINVFL 578
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSK+GG G+NL+GA+RL++FD DWNPA D Q+M+R+ RDGQ KPCF+YR +TG I+EK
Sbjct: 579 LSSKSGGMGINLVGASRLILFDNDWNPATDLQSMSRIHRDGQLKPCFIYRLFTTGCIDEK 638
Query: 631 MMQRQAHKKALSSCVVD----CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVN 686
+ QRQ K LSS +D + DV F +L+++F+++ +TIS+THD ++C +
Sbjct: 639 IFQRQLVKNKLSSKFLDNDATSKSDV---FDNDDLKNIFEIDTSTISNTHDLLECVCEGD 695
Query: 687 GIQVKPPPLESDCTDDLSCWHHVTEKRWLVD 717
G + P +E W E + +D
Sbjct: 696 GSMLSQPTIEESEPPPKQAWVTALELKKKID 726
>gi|343424755|emb|CBQ68293.1| related to RAD54-DNA-dependent ATPase of the Snf2p family
[Sporisorium reilianum SRZ2]
Length = 1065
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 233/608 (38%), Positives = 344/608 (56%), Gaps = 39/608 (6%)
Query: 93 GVRREGARKALH---DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRP 149
G+ G K H DP P A+V+ P + +H K + V VV+DP L+ LRP
Sbjct: 287 GLVNPGQGKKAHPRFDPNEPGAIVMKRPDE--SHQRRYNPKGRPIVDVVLDPQLTKALRP 344
Query: 150 HQREGVKFMYECVTGVRI--EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP---L 204
HQ EGVKF+YE V G+ E G I+ADEMGLGKTLQ I L+ TL++Q
Sbjct: 345 HQVEGVKFLYERVMGMHADGEKGQGAILADEMGLGKTLQTIALVLTLMKQSCYYTSKSCT 404
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP 263
I++ +IV P +LVKNW E KW+G + L ID D + ++ + R
Sbjct: 405 IERTMIVCPLTLVKNWKREFNKWIGTNSLNVLCID-------DGRGRDDVERFVRSKAYH 457
Query: 264 ILVISYETFRSHASVLHKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+LVI YE RS ++ + + L++CDEGHRLK+ ++QT Q L KR+++LSGTP
Sbjct: 458 VLVIGYEKLRSCIDIVKTAQPPIDLIVCDEGHRLKSKDAQTTQMFAELSTKRKIILSGTP 517
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQN+L E ++++ FV G+L + F+ +E PILR + S + RL L+ I
Sbjct: 518 IQNNLSELYAMIDFVVPGLLVNPEAFKTMFEEPILRSRAKHCSKQTKATGQARLNALMTI 577
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
++RRT+ +L+K+LP K E V+ + Q +Y +++ S VR ++G
Sbjct: 578 TKDVILRRTADILTKFLPPKKEMVLFCSPSQEQIRIYQSILGSSDVRSLLRGDAGN---- 633
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAM-----NILPTGYAASYKSGKLLIELS 496
L I L+KLCN P+L++ ++ AD A+ P + + S
Sbjct: 634 -GLLQIGVLRKLCNTPELLLKDTESSADSATKALVGDLTRFFPPNFVRNEA------RFS 686
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
KL + +L ++ TDDK+VLVSN+T TLD+ E + + + Y Y+RLDG +R +
Sbjct: 687 GKLTCVMDLLQTVRAQTDDKVVLVSNFTSTLDIVEAMMRKKRYPYLRLDGKTPQDERMLM 746
Query: 557 VETFNK--TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
V FN+ N F+F+LS+K+GG GLNLIGANRLV+ D DWNP+ D QAMAR+ RDGQ+K
Sbjct: 747 VNQFNREGVDNSFVFLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQRK 806
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTIS 673
PC++YR L +G+++EK+ QRQ K LS +++ E+ A FS ELR +F L ++
Sbjct: 807 PCYIYRLLLSGTMDEKIYQRQISKLGLSDSLMNAEKKSASDTFSQEELRDIFTLHLDSTC 866
Query: 674 DTHDKIKC 681
+H ++ C
Sbjct: 867 ISHRQLLC 874
>gi|433837|emb|CAA53930.1| unnamed protein product [Saccharomyces cerevisiae]
gi|536326|emb|CAA85017.1| RDH54 [Saccharomyces cerevisiae]
Length = 958
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 238/597 (39%), Positives = 346/597 (57%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 283 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 342
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 343 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 402
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 403 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 459
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 460 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 519
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 520 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 579
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 580 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 629
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 630 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 678
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 679 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 738
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+G +RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 739 SAKSGGVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 798
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 799 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 854
>gi|134109445|ref|XP_776837.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259517|gb|EAL22190.1| hypothetical protein CNBC3280 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1045
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 239/593 (40%), Positives = 347/593 (58%), Gaps = 50/593 (8%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
AL +P A A+V+ P L K+ I V VV+DPVL N+LR HQ+EGVKFMY C
Sbjct: 292 ALFNPHAEGAVVMPRP----GEKLAKLKGTTI-VDVVLDPVLGNLLRDHQKEGVKFMYSC 346
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKN 219
V G+ + GCI+ADEMGLGKTLQ I L++T+L+Q P A +I KAIIV P +LV N
Sbjct: 347 VMGMTGAEGEGCILADEMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDN 406
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
W E KW+ RV L DG D +++SF++ + + AS +
Sbjct: 407 WRKEFKKWVDRRVNVLVADG-----TDYRVSSFLR---------------KVVKELASCI 446
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ L++CDEGHRLK+ +++T + LK +RR+ TP+QNDL EY+++V+F G
Sbjct: 447 PP--IDLIVCDEGHRLKSKDNKTIKMFDMLKTQRRIR---TPVQNDLGEYWAMVNFACPG 501
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG F K YE PIL+ + S + ER L + ++RRT+A+L YLP
Sbjct: 502 VLGKYSAFAKHYEKPILKSRTPNCSAKDVELGRERANDLAKLSKEFVLRRTAAVLENYLP 561
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K E V+ I + LQ + +NL+ + V ++G G +L+ I ++K+ N P L
Sbjct: 562 PKYEYVIFIAPSLLQLSVLSNLLDPNIVGSFIRG-----YGAQSLALIDLMRKISNSPML 616
Query: 460 VM---DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
+ D++ D +A + + + + S K+++LD ML I T++K
Sbjct: 617 LKRRDDELARANDDLGSATSAAISAIPSDANIND--VTTSGKMLMLDKMLHSIYQCTEEK 674
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE---FIFMLSS 573
+V+VSN+T TLDL + L KL+ Y Y+RLDGS K+R ++V+ FNK F+F+LS+
Sbjct: 675 VVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQELVDRFNKDKGRQESFVFLLSA 734
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGG GLNLIG +RL++FD DWNP+ D QAMAR+ RDGQK+P ++YRFL+T +I+EK+ Q
Sbjct: 735 KAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHRDGQKRPVYIYRFLTTNAIDEKIYQ 794
Query: 634 RQAHKKALSSCVVD---CEEDVAR-HFSMSELRSLFQLEENTIS-DTHDKIKC 681
RQ K LS ++D E+ ++ FS +ELR +F L T THD + C
Sbjct: 795 RQITKTGLSDQMMDQTRTEKQTSKDSFSAAELRDIFTLNVRTDGCQTHDLLGC 847
>gi|344302445|gb|EGW32719.1| hypothetical protein SPAPADRAFT_70719 [Spathaspora passalidarum
NRRL Y-27907]
Length = 869
Score = 403 bits (1036), Expect = e-109, Method: Compositional matrix adjust.
Identities = 234/594 (39%), Positives = 347/594 (58%), Gaps = 55/594 (9%)
Query: 100 RKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY 159
RK L++ P+A+ L PP LS + V +DP L+ LRPHQ EGVKFMY
Sbjct: 207 RKPLYEGN-PDAIELPDPPHLSEF-----------IKVSIDPQLATKLRPHQIEGVKFMY 254
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK---PLIDKAIIVAPSSL 216
EC+ G R GC++ADEMGLGKTL IT +WTLL+Q P L+ K +IV P +L
Sbjct: 255 ECLLGYREYKGNGCLLADEMGLGKTLMTITTIWTLLKQNPFPHENHSLVKKVLIVCPVTL 314
Query: 217 VKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
+ NW E KWLG RV L + S + + + ++G+ V +L+++YE +H
Sbjct: 315 INNWKAEFRKWLGLNRVNILTLGNTSNEKQE------ILSFGKLNVYQVLIVNYEKVSAH 368
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
L + L++CDEGHRLKN ++ L+ L R+V+L+GTPIQN L+E+ +L+ F
Sbjct: 369 FQELSTIDFDLLVCDEGHRLKNSSNKVLNHLIKLNIPRKVVLTGTPIQNYLVEFHTLISF 428
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL-EQLIGIVNRCLIRRTSALL 394
+N G+L + F++++ PILR +D D+E + E + QLI + + L+RRT A+L
Sbjct: 429 LNPGVLPELKVFQRKFINPILRARDINCFDSEVKRQGEEISNQLIELTKKFLLRRTQAIL 488
Query: 395 SKYLPVKTEQVVCIKMTDLQKEL------YTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
YL KT+ ++ + T+LQ +L Y+N S+AV A + I
Sbjct: 489 DNYLTTKTDVLLFVPPTELQLKLFDFISKYSNQDCSNAV---------------AFTLIN 533
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
KK+CN P L+ D + N NIL S+ + L S K+ VL +L
Sbjct: 534 LYKKICNSPSLLQ------HDDYFNK-NIL--AQDRSFLNNTTLSTASGKINVLVPLLLE 584
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
+ + ++KIVL+SNYT+TL+L E + + ++RLDGS R K+V FNK+S +
Sbjct: 585 M-VAMNEKIVLISNYTKTLNLLETILRKLNLTFLRLDGSTANNLRNKLVNQFNKSSQIQV 643
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSK+GG G+NL+GA+RL++FD DWNP+ND Q+M+R+ RDGQ KPCF+YR +TG I+
Sbjct: 644 FLLSSKSGGMGINLVGASRLILFDNDWNPSNDLQSMSRIHRDGQLKPCFIYRIFTTGCID 703
Query: 629 EKMMQRQAHKKALSSCVVDCEEDV-ARHFSMSELRSLFQLEENTISDTHDKIKC 681
EK+ QRQ K LS +D + + F +L++LF+++ T S+THD ++C
Sbjct: 704 EKIFQRQLVKNKLSDKFLDDDNSAKSDGFDYQDLKNLFEVDIETNSNTHDLLEC 757
>gi|448103575|ref|XP_004200069.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
gi|359381491|emb|CCE81950.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
Length = 857
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/592 (39%), Positives = 351/592 (59%), Gaps = 53/592 (8%)
Query: 110 NALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED 169
++LV+ PP L+ + + V VVVDP+LS LRPHQR+ V F+Y+CV G +
Sbjct: 207 DSLVMSKPPDLAPNKV---------VDVVVDPILSKHLRPHQRDAVCFLYDCVMGFKKFG 257
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGP---LAKPLIDKAIIVAPSSLVKNWCNEITK 226
G ++ADEMGLGKTL I ++WTLL+Q P + P+ K +I P SL++NW E K
Sbjct: 258 GNGALLADEMGLGKTLTTIAVIWTLLKQNPYLEVDSPVCRKVLITCPVSLIQNWSKEFKK 317
Query: 227 WLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
WLG R+ L ++ A D+K+ + ++G+ V +++ISYE + L +
Sbjct: 318 WLGLNRIGILALNSKQNAA-DDKVQ--ISSFGKTRVYQVMIISYEKVLTCRKELMDLNID 374
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L++CDEGHRLK+ ++ Q L ++ K ++LL+GTPIQNDL E++++V+F+N G+LGT
Sbjct: 375 LLVCDEGHRLKSATNKVMQTLNQMQIKSKILLTGTPIQNDLYEFYNIVNFINPGVLGTPS 434
Query: 346 EFRKQYETPILRGQD-SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
F+K++ PI R +D +C + E+ +L+ + + ++RR+S++LS LP KT+
Sbjct: 435 HFQKEFVKPISRARDMNCTNKVILDFGEEKSNELLTLTRQFVLRRSSSVLSHVLPDKTDI 494
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKG--GENTKLGMTALSSITSLKKLCNHPDLVM- 461
++ ++LQ ++ + S A ++ N LG+ IT +KKLCN P L+
Sbjct: 495 IIFCPPSNLQLLMFKAIQSSQAFNSFLQSQTSVNNSLGI-----ITVMKKLCNSPSLLAN 549
Query: 462 DKIQTGADGFENAMNILPT------GYAASYKSGK--LLIELSAKLMVLDTMLAVIKMTT 513
DK+ F + P Y SGK LLI L +L + ++
Sbjct: 550 DKL------FNEIIKSCPEPKIDLESLHKRYSSGKVNLLIPL---------LLEICQLK- 593
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFML 571
+KIVL+SNYTQTLDLFE + + ++RLDGS K R +V FN ++ E +F+L
Sbjct: 594 -EKIVLISNYTQTLDLFENVLRKLNISFLRLDGSTQGKSRDSIVNEFNNSTFEKASVFLL 652
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNLIGA+RL++FD DWNP+ D QAMAR+ RDGQKKP F+YR +TG I+EK+
Sbjct: 653 SAKSGGFGLNLIGASRLILFDNDWNPSVDLQAMARIHRDGQKKPVFIYRLFTTGCIDEKI 712
Query: 632 MQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCS 682
QRQ K+ LS VD +E F +++L+ +F + T +THD ++CS
Sbjct: 713 FQRQLMKQKLSEKFVDNKEGSQLDLFDINDLKDIFTIHYETKCNTHDLLQCS 764
>gi|392593565|gb|EIW82890.1| hypothetical protein CONPUDRAFT_101343 [Coniophora puteana
RWD-64-598 SS2]
Length = 1035
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 236/617 (38%), Positives = 341/617 (55%), Gaps = 60/617 (9%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP A A+V+ P + + K K + VV+DP+++ LR HQ EGV+F+YECV
Sbjct: 277 HDPKAEGAIVMRVPSEQQSQKYNK--KSATVIPVVLDPIIARHLREHQIEGVRFLYECVM 334
Query: 164 GVRIEDAYGCIMADEM-----GLGKTLQCITLMWTLLRQGPLAK-PLIDKAIIVAPSSLV 217
G+R + GCI+ADEM GLGKTLQ I L+WTLL+Q P P + K +IV P SLV
Sbjct: 335 GLRRHEGQGCILADEMQVFGLGLGKTLQTIALVWTLLKQNPYGGGPTLSKVLIVCPVSLV 394
Query: 218 KNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHAS 277
NW E KWLG + KA+I + +NS ++ +L+I YE R+
Sbjct: 395 NNWRAEFHKWLGRDRVGIFTGDKDKAKIKHFVNS--------KIHHVLIIGYEKLRTVID 446
Query: 278 VLH--KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
L +GL++CDEGHRLK+ ++T L+ RR++LSGTPIQNDL E+ ++ F
Sbjct: 447 DLAYCSPPIGLIVCDEGHRLKSSSNKTSTMFKSLRTPRRIILSGTPIQNDLSEFHAMADF 506
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
N G+L FR+ YETPIL+ + A+ E N R QL + ++RR + LL
Sbjct: 507 CNPGLLDDYPTFRRIYETPILKSRAPDATVKETQIGNARSTQLADVAKSFVLRREATLLK 566
Query: 396 KYLPVK------------------TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
K+LP K E VV I T LQ ++ ++ + M+
Sbjct: 567 KFLPPKREFPHSFPCLYLIKLENTDEYVVFITPTKLQLSIFAAILNPRNLDDLMQSSTAE 626
Query: 438 KLGMTALSSITSLKKLCNHPDLV---MDKIQTGAD------GFENAMNILPTGYAASYKS 488
L + I L K+ N P L+ DK + G E A+ +LP ++
Sbjct: 627 SLAL-----INMLTKISNSPILLKAQADKAKASNAAVIHRRGMEEALALLPD------RA 675
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
LS KL L +L +I+ T++K ++VS+YT TL++ E K + Y Y RLDG
Sbjct: 676 EIEDFSLSGKLTALAKLLKIIRKETEEKCIIVSHYTSTLNIIEAYCKAKSYTYFRLDGQT 735
Query: 549 TIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
+KR + V FNK+S + F+F+LSSKAGG GLNLIGA+RL + D DWNP++D Q+MAR
Sbjct: 736 PAQKRQEYVNIFNKSSQQSHFLFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQSMAR 795
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR--HFSMSELRSL 664
+ RDGQK+P F+YRFL+ G+I+EK+ QRQ K LS+ ++ ++ F+ +LR +
Sbjct: 796 IHRDGQKRPVFIYRFLTAGAIDEKIYQRQVTKIGLSNSLMGSGTGTSKSDSFTKKDLRDI 855
Query: 665 FQLEENTISDTHDKIKC 681
F++ +T +THD + C
Sbjct: 856 FRVHPDTGCNTHDLLGC 872
>gi|448524405|ref|XP_003868979.1| Rdh54 DNA-dependent ATPase [Candida orthopsilosis Co 90-125]
gi|380353319|emb|CCG26075.1| Rdh54 DNA-dependent ATPase [Candida orthopsilosis]
Length = 825
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 231/613 (37%), Positives = 357/613 (58%), Gaps = 54/613 (8%)
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
RK L+D + L PP +++H V V +DP+L++ LRPHQ EGV F+
Sbjct: 179 TRKPLYDQNQ-DECTLTPPPNVASH-----------VPVRIDPILASKLRPHQLEGVSFL 226
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA---KPLIDKAIIVAPSS 215
YEC+ G R GC++ADEMGLGKTL IT +WTLL+Q P KP+++K ++V P +
Sbjct: 227 YECLMGFRNFKGNGCLLADEMGLGKTLMTITTIWTLLKQNPYPDQKKPVVNKVLVVCPVT 286
Query: 216 LVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
L+ NW E KWLG +V L ++ + + +N +G+ V +L+I+YE +
Sbjct: 287 LINNWREEFKKWLGLNKVNVLTLNNSMSDDKRDIIN-----FGKLNVYQVLIINYEKVLA 341
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
H L L++CDEGHRLKN ++ L L ++++L+GTPIQN L+E+++LV
Sbjct: 342 HYEELSTIPFDLLVCDEGHRLKNSANKVMINLTKLNISKKIVLTGTPIQNYLVEFYTLVS 401
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ-LIGIVNRCLIRRTSAL 393
F+N +L A+ F+K++ PI R +D + E K E + Q LI + ++ ++RRT A+
Sbjct: 402 FLNPRVLPDAKTFQKEFINPITRARDVNCFNQEIKKQGEEVSQRLISLTHKFILRRTQAI 461
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L YL KT+ ++ + T LQ +L+ + KS+ ++ G +LS I +K+
Sbjct: 462 LENYLTNKTDILLFVPPTQLQLDLFDLIKKSEKFQQLDSG-------TISLSLINLFRKI 514
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL--LIELSAKLMVLDTMLAVIKM 511
CN P L+ +D F + I S SGKL LI L V+++
Sbjct: 515 CNSPSLL------ASDDFYKS--ITDGSLKLSTSSGKLNALIPL------------VLEI 554
Query: 512 TTD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFM 570
T +K+VL+SNYT TLDL E++ K +Y+RLDG+ R K+V FN+ + +F+
Sbjct: 555 TAQKEKLVLISNYTTTLDLLEKVIKKLNLQYLRLDGTTPNNIRGKLVNRFNRDESISVFL 614
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSK+GG G+NL+GA+RL+++D DWNP+ D Q+M+R+ RDGQ+KPC++YR +TG I+EK
Sbjct: 615 LSSKSGGTGINLVGASRLILYDNDWNPSTDLQSMSRIHRDGQRKPCYIYRIFTTGCIDEK 674
Query: 631 MMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
+ QRQ K LSS +D + F ++L++LF+++ T S+THD + CS +G
Sbjct: 675 IFQRQLMKNKLSSKFLDNDASSKSDIFDYNDLKNLFEIDVGTKSNTHDLLGCSCAGDGFM 734
Query: 690 VKPPPLESDCTDD 702
+ +ESD +D
Sbjct: 735 LS-HEIESDEDED 746
>gi|405119148|gb|AFR93921.1| DNA supercoiling [Cryptococcus neoformans var. grubii H99]
Length = 1036
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 243/601 (40%), Positives = 347/601 (57%), Gaps = 68/601 (11%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
AL +P A A+V+ P L K+ I V VV+DPVL ++LR HQ+EGVKFMY C
Sbjct: 292 ALFNPHAEGAVVMPRP----GEKLAKLRGTTI-VDVVIDPVLGDLLREHQKEGVKFMYSC 346
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKN 219
V G+ + GCI+ADEMGLGKTLQ I L++T+L+Q P A +I KAIIV P +LV N
Sbjct: 347 VMGMTGAEGEGCILADEMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDN 406
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
W E KW RV E N L ++ AS +
Sbjct: 407 WRKEFKKW---RVV----------ECSNGLRKVVKEL-------------------ASCI 434
Query: 280 HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ L++CDEGHRLK+ +++T + LK +RR++LSGTP+QNDL EY+++V+F G
Sbjct: 435 P--PIDLIVCDEGHRLKSKDNKTTKMFDMLKTQRRIILSGTPVQNDLGEYWAMVNFACPG 492
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG F K YE PIL+ + S + ER L + ++RRT+A+L YLP
Sbjct: 493 VLGKYSAFAKHYEKPILKSRTPNCSAKDVELGRERANDLAKLSKEFVLRRTAAVLENYLP 552
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K E V+ I + LQ + +NL+ + VR ++G G +L+ I ++K+ N P L
Sbjct: 553 PKYEYVIFIAPSLLQLSVLSNLLDPNIVRSFIRG-----YGAQSLALIDLMRKISNSPML 607
Query: 460 VM--DKIQTGAD-----GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
+ D T AD A++ +P+ ++ + S K+++LD ML I
Sbjct: 608 LKRNDNELTRADDDLGSATSAAISAIPS------ETNINDVTTSGKMLLLDKMLHSIYQC 661
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT---SNEFIF 569
T +K+V+VSN+T TLDL + L KL+ Y Y+RLDGS K+R +V+ FNK F+F
Sbjct: 662 TQEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQRQDLVDRFNKDQGRQGSFVF 721
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LS+KAGG GLNLIG +RL++FD DWNP+ D QAMAR+ RDGQK+P ++YRFL+T +I+E
Sbjct: 722 LLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHRDGQKRPVYIYRFLTTNAIDE 781
Query: 630 KMMQRQAHKKALSSCVVD---CEEDVAR-HFSMSELRSLFQLEENTIS-DTHDKIKCSRC 684
K+ QRQ K LS ++D E+ ++ FS +ELR +F L T THD + C +C
Sbjct: 782 KIYQRQITKTGLSDQMMDQTRSEKQTSKDSFSAAELRDIFTLNLQTDGCQTHDLLGC-QC 840
Query: 685 V 685
+
Sbjct: 841 I 841
>gi|366996797|ref|XP_003678161.1| hypothetical protein NCAS_0I01510 [Naumovozyma castellii CBS 4309]
gi|342304032|emb|CCC71819.1| hypothetical protein NCAS_0I01510 [Naumovozyma castellii CBS 4309]
Length = 926
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 242/594 (40%), Positives = 343/594 (57%), Gaps = 73/594 (12%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGV-------------------RIEDAYGCIM 175
V V+VDP+L +LRPHQREGVKFMY+CV G+ + D GC++
Sbjct: 247 VDVIVDPLLGKLLRPHQREGVKFMYDCVMGLATNHQETDEDNTGKSLILEKDSDIGGCLL 306
Query: 176 ADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWCNE 223
ADEMGLGKTL ITL+WTLL+Q P K L K ++V P +L+ NW E
Sbjct: 307 ADEMGLGKTLMTITLIWTLLKQSPSLKNIACSQSGVPLHGLCRKILVVCPVTLIGNWKRE 366
Query: 224 ITKWLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHASVLH- 280
KWL R+ L + + E+D + +F++ + +LVI YE S + LH
Sbjct: 367 FAKWLNLNRIGILTLSSRNTPEMDKTAVKNFLRV---QRTFQVLVIGYEKLLSVSEELHG 423
Query: 281 -KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
++ + L++CDEGHRLKN S+ L L+ KR++LLSGTPIQNDL E+++++ F+N G
Sbjct: 424 SRDLIDLLICDEGHRLKNGSSKVLNVLKNLEIKRKILLSGTPIQNDLNEFYTIIDFLNPG 483
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERT--KANERLEQLIGIVNRCLIRRTSALLSKY 397
ILG+ F+K++ PI RG+D+ E R +++I I + +RRT+A+LSKY
Sbjct: 484 ILGSYPYFKKRFIAPITRGRDTENRHNEDIIELGEGRSKEMIDITRKFTLRRTNAILSKY 543
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
LP KT+ ++ K T Q +L L +D + R+ N ++L IT KK+CN P
Sbjct: 544 LPPKTDIILFCKPT--QSQL---LAFNDILSRSRIDFANLSFN-SSLGLITLFKKICNSP 597
Query: 458 DLVMDKIQTGADGFENAMNILPTG-----YAASYKSGKLLIELSAKLMVLDTMLAVIK-M 511
L+ G D + + I P G Y S SGKL I L T+L IK
Sbjct: 598 TLI------GDDSYYQS-KIRPDGVIQERYDRSLNSGKLKI--------LMTLLEKIKGN 642
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T ++K+V+VSNYTQTLD+ + L RLDGS K+R +V TFN+ + F F+L
Sbjct: 643 TNNEKVVIVSNYTQTLDIIQNLMNSAQMVSCRLDGSTPAKQRDSIVNTFNRNPSIFAFLL 702
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNLIGA+RL++FD DWNP+ D QAM+R+ RDGQKK C++YR ++TG I+EK+
Sbjct: 703 SAKSGGVGLNLIGASRLILFDNDWNPSIDLQAMSRIHRDGQKKHCYIYRLITTGCIDEKI 762
Query: 632 MQRQAHKKALSSCVVDCEEDVARH------FSMSELRSLFQLEENTISDTHDKI 679
+QRQ K +LS +D + F+ +L+ LF + E T S+THD I
Sbjct: 763 LQRQLMKHSLSKKFLDSSYTTGKTGSNDDLFTKEDLKDLFTIMETTKSNTHDLI 816
>gi|328871058|gb|EGG19429.1| SNF2-related domain-containing protein [Dictyostelium fasciculatum]
Length = 830
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 228/583 (39%), Positives = 333/583 (57%), Gaps = 99/583 (16%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
L +P A NA VL+TP ++ K+ HVVVDP LS+ LRPHQR GV+F+Y+C+
Sbjct: 215 LFNPNATNAFVLHTP-------TIEEIKNNTATHVVVDPHLSSKLRPHQRLGVEFLYQCL 267
Query: 163 TGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--KPLIDKAIIVAPSSLVKNW 220
TG + E YG I+AD+MGLGKTLQ +TL+WT+++Q P + KP++ K IIVAP++L+ NW
Sbjct: 268 TGNKHEYGYGAILADQMGLGKTLQALTLIWTMVQQNPNSSTKPMVKKVIIVAPATLIGNW 327
Query: 221 CNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
+EI WLG R P+ K ++ ++ +G +P+L+ISYE S+++ L
Sbjct: 328 RSEIITWLG-REKLKPVTLSDKLKVSKA--DQLKDFGESQTDPVLIISYEQCVSYSNQLE 384
Query: 281 K-NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
K +++GL++ DEGHR+KN ++T A+ +KA RR++LSGTPIQNDL E++++V FVN G
Sbjct: 385 KLSDIGLLIADEGHRIKNATTKTAMAVNSIKATRRIILSGTPIQNDLYEFYAMVDFVNPG 444
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
LGT EFR+ + TPI + +DS ++ E+ + + QL + + ++RR S +L KYLP
Sbjct: 445 ALGTPNEFRRDFATPIQKSRDSNSNQREKDQGILKSIQLAKMTSSFILRRKSNVLEKYLP 504
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
+K+ Q++ KM Q ++Y I S A + +LS+I LKKLCN D
Sbjct: 505 LKSTQIIFCKMPSTQSKIYQETINSFAEKD------------FSLSNIILLKKLCNSKD- 551
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
SGKL L V D + ++ + +KIVL
Sbjct: 552 ----------------------------SGKL-------LFVGDLIKSLPR---GEKIVL 573
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEF-IFMLSSKAGGC 578
VSNYTQTLD+FE L K + ++RLDG + R ++ FN +++ +F+LS+KAGG
Sbjct: 574 VSNYTQTLDIFETLCKELSFGFLRLDGQVEADSRQFLITKFNDPADQHKVFLLSAKAGGV 633
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGAN +V+FDPDWNPA D QAM RVWR GQ+K + G
Sbjct: 634 GINLIGANHIVLFDPDWNPAVDLQAMERVWRQGQEK-----NYFDKGG------------ 676
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
F+ EL+ +F NT +THD ++C
Sbjct: 677 -----------------FTTDELKDIFSFNSNTSCETHDLLQC 702
>gi|365982629|ref|XP_003668148.1| hypothetical protein NDAI_0A07510 [Naumovozyma dairenensis CBS 421]
gi|343766914|emb|CCD22905.1| hypothetical protein NDAI_0A07510 [Naumovozyma dairenensis CBS 421]
Length = 866
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 233/598 (38%), Positives = 347/598 (58%), Gaps = 72/598 (12%)
Query: 128 IDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGV--------------------RI 167
ID D V V+VDP++S LR HQREGVKF+Y+C+ G+ +
Sbjct: 241 IDAD---VDVIVDPLISKFLRKHQREGVKFIYDCINGLSQVEASTAVVDPTQQSMILEKN 297
Query: 168 EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSS 215
D GC++ADEMGLGKTL I ++WTL +Q PL K L K +I+ P +
Sbjct: 298 SDINGCLLADEMGLGKTLMTIAVIWTLYKQTPLVKNIPCSQSGVPLSGLCKKFLIICPVT 357
Query: 216 LVKNWCNEITKWLG-GRVAALPIDGGSKAEID-NKLNSFMQ---TYGRRPVNPILVISYE 270
L+ NW E KWL R+ L ++ + E+D N + +F++ TY +L++ YE
Sbjct: 358 LIGNWKREFKKWLNLNRIGILTLNSNNTPEMDRNAVKNFLKVQRTYQ------VLIMGYE 411
Query: 271 TFRSHASVL--HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
S ++ L KN + +++CDEGHRLK+ S+ Q L L KR++LLSGTPIQNDL E
Sbjct: 412 KVLSVSAELTNQKNLIDMLVCDEGHRLKSGTSKVLQVLKNLDVKRKILLSGTPIQNDLNE 471
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK--ANERLEQLIGIVNRCL 386
+++++ F+N GILG+ F+K+Y PI R +D+ E ER ++I I +
Sbjct: 472 FYTIIDFINPGILGSFPYFKKRYMVPITRARDTSNRYNEEILELGEERSREMIEITKQFT 531
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RRT+++L++YLP +T+ ++ K T+ Q + + N I R K NT + L
Sbjct: 532 LRRTNSILTEYLPPRTDIILFCKPTETQLQAFDNAI------RGAKLDFNTASFNSTLGL 585
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
IT LKK+CN P L+ + F + ++ + Y+ + S KLMVL ++L
Sbjct: 586 ITLLKKICNSPSLIKND-----SYFTSKID------HSQYQRANFNVLNSGKLMVLMSLL 634
Query: 507 AVIKMTT-DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
++ ++KIV+VSNYTQTLD+ E L + RLDGS K+R +V +FN+ +
Sbjct: 635 KHLRTNCPEEKIVIVSNYTQTLDIIENLLLSEQMIFCRLDGSTLPKQRDSIVMSFNRNPS 694
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
F F+LS+K+GG GLNL+GA+RLV+FD DWNP+ D QAM+R+ RDGQK+PC++YR ++TG
Sbjct: 695 TFAFLLSAKSGGVGLNLVGASRLVLFDNDWNPSIDLQAMSRIHRDGQKRPCYIYRLITTG 754
Query: 626 SIEEKMMQRQAHKKALSSCVVDCE-EDVARH---FSMSELRSLFQLEENTISDTHDKI 679
I+EK++QRQ K LS +D E+ + F +LR LF + +T S+THD I
Sbjct: 755 CIDEKILQRQLMKHNLSQKFLDSSIENTNVNDDLFDKQDLRDLFSINHHTKSNTHDLI 812
>gi|71019185|ref|XP_759823.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
gi|46099621|gb|EAK84854.1| hypothetical protein UM03676.1 [Ustilago maydis 521]
Length = 1060
Score = 397 bits (1019), Expect = e-107, Method: Compositional matrix adjust.
Identities = 225/593 (37%), Positives = 336/593 (56%), Gaps = 36/593 (6%)
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
DP P A+V+ P + H K + V VV+DP L+ LRPHQ EGVKF+YE V G
Sbjct: 297 DPNEPGAIVMKRPDE--RHQRAHNPKRRPVVDVVLDPQLTKALRPHQVEGVKFLYERVMG 354
Query: 165 VRIE--DAYGCIMADEMGLGKTLQCITLMWTLLRQG---PLAKPLIDKAIIVAPSSLVKN 219
+ + G I+ADEMGLGKTLQ I L+ TL++Q I++A+IV P +LVKN
Sbjct: 355 MHADGTKGKGAILADEMGLGKTLQTIALILTLIKQSCYYTSKSSTIERAMIVCPLTLVKN 414
Query: 220 WCNEITKWLGGR-VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KW+G + L ID E ++ + R ++VI YE RS +
Sbjct: 415 WKREFRKWIGSNSLNVLCIDEDCGRE-------HVERFARSKAYHVMVIGYEKLRSCIDI 467
Query: 279 LHKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
+ + V L++CDEGHRLK+ ++QT + L +R+++LSGTPIQN+L E ++++ FV
Sbjct: 468 VKTAQPPVDLIVCDEGHRLKSKDAQTTKMFDELSTERKIILSGTPIQNNLSELYAMIDFV 527
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
+LG + F+ +E PILR + AS + RL L+ + ++RRT+ +L+K
Sbjct: 528 IPDLLGKPESFKTLFEEPILRSRAKHASKHAKAVGQARLGALMTVTKDIILRRTADILTK 587
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
+LP K E V+ ++ Q +Y ++ S VR ++G L I L+KLCN
Sbjct: 588 FLPPKHEMVLFCSPSEEQLRIYQAILGSSQVRSLLQGAPGN-----GLLQIGVLRKLCNS 642
Query: 457 PDLVMDKIQTGADGFENAM-----NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
P+L++ + AD A+ P + + KL+ + +L ++
Sbjct: 643 PELLLKDTEADADSPTKALVGDLTRFFPPNFVRNEA------RFGGKLICVMNLLQTVRA 696
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIF 569
TDDK+VLVSN+T TLD+ E + + + Y Y+RLDG +R +V FN+ F+F
Sbjct: 697 QTDDKVVLVSNFTSTLDIIEAMMRKKRYPYLRLDGKTPQDERMAMVNQFNREGVDKSFVF 756
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
+LS+K+GG GLNLIGANRLV+ D DWNP+ D QAMAR+ RDGQKKPC++YR L +G+++E
Sbjct: 757 LLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQKKPCYIYRLLLSGTMDE 816
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKC 681
K+ QRQ K LS +++ E+ FS ELR +F L ++ +H ++ C
Sbjct: 817 KIYQRQISKLGLSDSLMNAEKKTTSDTFSQEELRDIFTLHLDSTCISHRQLLC 869
>gi|159467693|ref|XP_001692026.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas
reinhardtii]
gi|158278753|gb|EDP04516.1| SWI/SNF chromatin remodeling complex component [Chlamydomonas
reinhardtii]
Length = 845
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 241/600 (40%), Positives = 331/600 (55%), Gaps = 66/600 (11%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
LHDP AP A+VL T K+ + V VDP L +LRPHQ EGV+FMYE
Sbjct: 124 GLHDPHAPGAVVLNTVQWKGGSG--KLRDGRPVTPVTVDPYLGRLLRPHQAEGVRFMYEA 181
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V G+R D GCI+ADEMGLGKTLQ ITL WTLLRQGP +P+ K ++V P++LV NW
Sbjct: 182 VMGLRTADKTGCILADEMGLGKTLQVITLAWTLLRQGPEGRPVAGKVLVVTPATLVDNWG 241
Query: 222 NEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH 280
E+ KWLG R+ AL + A+ ++ F ++ +++ SYET R HA L
Sbjct: 242 REVKKWLGSERLQALCLQQSPTAK--QQILEFRHGVHQK----MMITSYETLRKHAKDL- 294
Query: 281 KNEVGLVLCDEGHRLKNC-ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
L++CDEGHRLK+ ++T AL+ L +RRVLL+GTP+QNDL E+++L+ FV
Sbjct: 295 AGVFDLLVCDEGHRLKSVGGNKTIDALLSLGCQRRVLLTGTPVQNDLQEFYALLSFVAPE 354
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
LG+A F + Y PI R Q+ A+ ++ R +L V+ ++RRT ALL+K+LP
Sbjct: 355 ALGSAALFNRVYGIPITRSQEGTATAEDKELGAARSSELKAKVSAFILRRTQALLAKHLP 414
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
+ + T+ Q LYT +++S AV + GG T L+ IT+L+K
Sbjct: 415 PLASLTLFCRPTEQQVSLYTAVLRSKAVASLLGGGGGGGEDNT-LAVITALRK------- 466
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
K+ VL +L I ++ V+
Sbjct: 467 ---------------------------------ARTQCKMQVLSELLRGIG-AVGERCVV 492
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCG 579
VS T LDL RLS VR+DG+ ++ R +V+ FNK + +F+LS++AGG G
Sbjct: 493 VSTSTAALDLVGRLST------VRIDGATSVDGRQIIVDNFNKLNMGQVFLLSTRAGGAG 546
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
LNL+GAN LV++D DWNPA D QAMAR+WRDGQ KPC VYR L+TG+IEEK+ QRQ K
Sbjct: 547 LNLVGANHLVLYDSDWNPAMDQQAMARIWRDGQTKPCHVYRMLTTGTIEEKVYQRQLMKA 606
Query: 640 ALSSCVV------DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPP 693
L+S + + F+ ELR+LF L T SDT D + R V G++ P
Sbjct: 607 DLASATMVGGGAGGGGKSGGGKFTREELRALFSLNTATASDTRDLLPPGR-VAGLRWLEP 665
>gi|444322239|ref|XP_004181775.1| hypothetical protein TBLA_0G03190 [Tetrapisispora blattae CBS 6284]
gi|387514820|emb|CCH62256.1| hypothetical protein TBLA_0G03190 [Tetrapisispora blattae CBS 6284]
Length = 1001
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 238/637 (37%), Positives = 359/637 (56%), Gaps = 73/637 (11%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVR------------------------IEDA 170
+ V++DP+L N+LRPHQ E VKFMY+C+ G + +
Sbjct: 307 IDVIIDPLLGNLLRPHQVEAVKFMYDCIMGFERKIIKEHSSQISTNHHKPQILNKDSDIS 366
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPL------------AKPLIDKAIIVAPSSLVK 218
GC++ADEMGLGKTL ITL+WTLL+Q P ++ L+ K +I P +L++
Sbjct: 367 GGCLLADEMGLGKTLSTITLIWTLLKQTPFPWLSPCTQAGVPSQGLLKKVLIACPVTLIQ 426
Query: 219 NWCNEITKWLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHA 276
NW NE KWL R+ L ++ + A D + +F++ GR +L+I YE + A
Sbjct: 427 NWKNEFKKWLSLNRIGILTLNANNTAAKDRTDVRNFLRV-GR--TYHVLIIGYEKLINVA 483
Query: 277 SVL------HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
L H +++ L++CDEGHRLKN S+ L L ++++LL+GTPIQNDL+E+F
Sbjct: 484 DELIDDSNNHPHKIDLLVCDEGHRLKNNNSKILNTLKNLNIEKKILLTGTPIQNDLVEFF 543
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD--AERTKANERLEQLIGIVNRCLIR 388
+++ F+N I G+ Q F+K++ TPI R +D S A K R ++LI I + ++R
Sbjct: 544 TIIDFLNPSIFGSFQSFKKRFITPITRARDMSNSGNFAVIEKGEARSQELIEITQKFILR 603
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
RT+ +L++YLP +T+ ++ K + Q ++ +++ + + ++L IT
Sbjct: 604 RTNDILTRYLPPRTDLILFCKPSQSQLGIFRSILTQSSCDFSSANFN------SSLELIT 657
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
LKK+CN P L+ +D F N+ I S S + S KL VL +L
Sbjct: 658 LLKKVCNSPSLLT------SDSFYNS-KIKSQQANVSLNSYENKTNESGKLRVLMELLKK 710
Query: 509 IKMTTD--DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE 566
I+ TD +K+V+VSNYTQTLD+ + L +VRLDGS K+R +V+ FNK +
Sbjct: 711 IQSVTDGKEKVVIVSNYTQTLDIIQNLLSSASMSFVRLDGSTPSKQRDAIVKEFNKIPSI 770
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F F+LS+K+GG GLNLIGA+RLV+FD DWNP+ D QAM+R+ RDGQKKPC++YR ++TG
Sbjct: 771 FAFLLSAKSGGVGLNLIGASRLVLFDNDWNPSIDLQAMSRIHRDGQKKPCYIYRLVTTGC 830
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARH------FSMSELRSLFQLEENTISDTHDKI- 679
I+EK++QRQ K LS + R F S+L++LF + NT S+THD I
Sbjct: 831 IDEKILQRQLMKNNLSKKFLGDSSKENRDSVKDDLFLKSDLKNLFTVLTNTPSNTHDLIC 890
Query: 680 KCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
C + IQ +SD + D+S + + W+
Sbjct: 891 SCEGLGDEIQYSDED-DSDISRDISLEYQ-SSSPWIT 925
>gi|337743289|gb|AEI73141.1| RAD54L [Kryptolebias marmoratus]
Length = 283
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 189/292 (64%), Positives = 227/292 (77%), Gaps = 10/292 (3%)
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
CNHP L+ D+ G +GFE A+N+ P G++ + +LS K++VLD +LA+ + TT
Sbjct: 1 CNHPALIYDRCVEGEEGFEGALNLFPPGFSLK----AVEPQLSGKMLVLDYILAMTRTTT 56
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLS 572
DK+VLVSNYTQTLDLFE+L Y YVRLDG+M+IKKRAK+VE FN N EFIFMLS
Sbjct: 57 SDKVVLVSNYTQTLDLFEKL-----YLYVRLDGTMSIKKRAKIVERFNSPHNPEFIFMLS 111
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
SKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK++
Sbjct: 112 SKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIL 171
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKP 692
QRQAHKKALSSCVVD E+DV RHFS+ ELR LF L E T SDTHDK +C RCVNG +V+P
Sbjct: 172 QRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLNEGTASDTHDKFRCRRCVNGREVRP 231
Query: 693 PPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEKSKV 744
P +SDCT DLS W+H +K+ L D +LK W A VSFVF+QHS + + V
Sbjct: 232 PAEDSDCTSDLSQWNHCLDKKGLRDQVLKASWDAAVSFVFHQHSHEDHRRVV 283
>gi|367006803|ref|XP_003688132.1| hypothetical protein TPHA_0M01230 [Tetrapisispora phaffii CBS 4417]
gi|357526439|emb|CCE65698.1| hypothetical protein TPHA_0M01230 [Tetrapisispora phaffii CBS 4417]
Length = 984
Score = 394 bits (1012), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/597 (39%), Positives = 349/597 (58%), Gaps = 75/597 (12%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVR-------------------------IED 169
V V+VDP+L +LRPHQREGVKFMY+C+ G++ D
Sbjct: 304 VDVIVDPILGKLLRPHQREGVKFMYDCMMGLQRPSTTIVKNTDDDGDSTSKSLTLEYDSD 363
Query: 170 AYGCIMADEMGLGKTLQCITLMWTLLRQGPL---------AKPL---IDKAIIVAPSSLV 217
GC++ADEMGLGKTL ITL+WTLL+Q PL K IIV P +L+
Sbjct: 364 IKGCLLADEMGLGKTLMTITLIWTLLKQTAFPTNVAVSQSGVPLHGAYKKFIIVCPVTLI 423
Query: 218 KNWCNEITKWLG----GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NW E KWLG G + P + K ++D + +F++ + + +L+I YE
Sbjct: 424 GNWKREFGKWLGLSAIGILTLSPKNNSEKDKMD--VRNFLKV---QRIYQVLIIGYEKIL 478
Query: 274 SHASVL--HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
S + L +K+++ +++CDEGHRLKN S+ AL L + +VLLSGTPIQNDL E+F+
Sbjct: 479 SVSDDLFENKDKIDMIICDEGHRLKNGSSKILNALKRLDVENKVLLSGTPIQNDLNEFFT 538
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRR 389
++ F+N GILG+ F+K++ TPI R +D E + +E+ +++I I R ++RR
Sbjct: 539 IIDFINPGILGSFNHFKKKFITPITRARDVNNRYNEDILSIGSEKSKEMIQITKRFVLRR 598
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSIT 448
T++LL+KYLP K + ++ K TD Q ++++ ++ + L T+ L IT
Sbjct: 599 TNSLLTKYLPPKNDVILFCKPTDAQLNAFSDIF-------SVSHFDINNLSFTSSLGLIT 651
Query: 449 SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
KK+CN P L+ +D + + N+ + Y++ KL S KL V ++L
Sbjct: 652 LFKKICNTPMLI------KSDSYYQS-NLRNSSTTLVYEN-KLD---SGKLKVFMSLLDH 700
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
I+ TD+K+V+VSNYTQTLD+ E L + + RLDGS K+R +V FN+ +N F
Sbjct: 701 IRNATDEKVVIVSNYTQTLDILENLMRSQNITTCRLDGSTPNKQRDSIVTNFNRNANIFG 760
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSK+GG GLNLIGA+RL++FD DWNP+ D QAM+R+ RDGQKK C +YR ++TG I+
Sbjct: 761 FLLSSKSGGAGLNLIGASRLILFDNDWNPSIDLQAMSRIHRDGQKKTCHIYRLITTGCID 820
Query: 629 EKMMQRQAHKKALSSCVV-DCEEDVARH-----FSMSELRSLFQLEENTISDTHDKI 679
EK+ QRQ K +LS + D +++ H F+ +L+ LF + ++ +THD I
Sbjct: 821 EKIFQRQLMKHSLSQQFLNDQDDNSGSHKNDDLFNKEDLKDLFTIVSDSKCNTHDLI 877
>gi|349604547|gb|AEQ00068.1| DNA repair and recombination protein RAD54-like-like protein,
partial [Equus caballus]
Length = 308
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/296 (63%), Positives = 232/296 (78%), Gaps = 8/296 (2%)
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
LKKLCNHP L+ DK DGFE A++I P GY+ S L +LS K++VLD +LAV
Sbjct: 14 LKKLCNHPALIYDKCVEEEDGFEGALDIFPPGYS----SKALEPQLSGKMLVLDYILAVT 69
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFI 568
+ +DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S +F+
Sbjct: 70 RSRGNDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNNPLSPDFV 129
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IE
Sbjct: 130 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIE 189
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
EK+ QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD+++C RCVN
Sbjct: 190 EKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLRCRRCVNSH 249
Query: 689 QVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
QV+PPP SDCT DL+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 250 QVRPPPDGSDCTSDLAQWNHSTDKRGLKDEVLQAAWDAASTAITFVFHQRSHEEQR 305
>gi|170092931|ref|XP_001877687.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria
bicolor S238N-H82]
gi|164647546|gb|EDR11790.1| DNA repair protein, SNF2 family DNA-dependent ATPase [Laccaria
bicolor S238N-H82]
Length = 1051
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 245/654 (37%), Positives = 348/654 (53%), Gaps = 101/654 (15%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREG-------- 154
LHDP A +A+V+ P + L + V VV+DP+LS +RPHQ+EG
Sbjct: 316 LHDPDAADAVVMKFPSKEHTKSNLNV------VPVVLDPILSRRMRPHQKEGWLTGVSSV 369
Query: 155 ----------VKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--K 202
V F+YECV G+R + GCI+ADEMGLGKTLQ I L+WTLL+Q +
Sbjct: 370 RLYSEQLSQGVMFLYECVMGLRKHEGQGCILADEMGLGKTLQTIALIWTLLKQNLYGSKE 429
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
P K +IV P SL NW E KWLG + I K+ ++N F +
Sbjct: 430 PAAKKVLIVCPVSLTTNWKAEFNKWLGKDRVGVVICEKDKS----RVNQFFYNKNQH--- 482
Query: 263 PILVISYETFRSHASVLHKN----EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
+LVI YE R+ L + L++CDEGHRLK+ ++T L L+ RRV+LS
Sbjct: 483 -VLVIGYERLRTVIDTLSSGVSVPAIDLIVCDEGHRLKSANNKTTAILKALRTPRRVILS 541
Query: 319 GTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
GTPIQNDL E+ ++ F N G+L FR+ YE+PIL+ + AS E R QL
Sbjct: 542 GTPIQNDLGEFHAMAEFCNPGLLDDYNVFRRVYESPILKSRAPDASAKEIEIGETRTAQL 601
Query: 379 IGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTK 438
+ I N ++RR + LL +LP K E VV + T LQ +++ +++ D + ++
Sbjct: 602 LSISNSFVLRRDATLLKNHLPPKYEYVVFVTPTALQLSMFSKILRPDRLIDLVQSSTAES 661
Query: 439 LGMTALSSITSLKKLCNHPDLV-----MDKIQTGAD-------GFENAMNILP-TGYAAS 485
L + I L K+ N P L+ KI+T D G + A+ +LP T +
Sbjct: 662 LAL-----INILTKISNSPILLKAAADKAKIKTSGDAPYILRTGVDEALGLLPDTTHFGD 716
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
+ LS KL+ L +L +I+ TT++K VLVS+YT TL++ E + +GY Y RLD
Sbjct: 717 F-------SLSGKLIALAKLLTIIRHTTEEKCVLVSHYTSTLNILEAFCQKKGYSYYRLD 769
Query: 546 GSMTIKKRAKVVETFNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP------ 597
G KR + V FN S + FIF+LSSKAGG G+NLIGA+RL + D DWNP
Sbjct: 770 GQTPQVKRQEYVNAFNNVSQRSSFIFLLSSKAGGLGINLIGASRLCLIDSDWNPRLVGRR 829
Query: 598 ----------ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV- 646
++D Q+MAR RDGQK+P F+YRFL+TG+I+EK+ QRQ K LS+ ++
Sbjct: 830 TQLTPTLISDSHDLQSMARCHRDGQKRPVFIYRFLTTGAIDEKIYQRQVTKLGLSASLIG 889
Query: 647 ----------------DCEEDVARHFSMS---ELRSLFQLEENTISDTHDKIKC 681
+ + HF S +LR +F++ +TI +THD ++C
Sbjct: 890 SAGSSSASKTDSFSRKEVHIQLQFHFKNSTDVQLRDIFRIHPDTICNTHDLLEC 943
>gi|294658308|ref|XP_002770756.1| DEHA2F06446p [Debaryomyces hansenii CBS767]
gi|202953033|emb|CAR66284.1| DEHA2F06446p [Debaryomyces hansenii CBS767]
Length = 884
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/602 (38%), Positives = 353/602 (58%), Gaps = 36/602 (5%)
Query: 100 RKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY 159
R L+DP A ++L++ PP + + + VVVDPVLS +LRPHQRE V F+Y
Sbjct: 215 RNPLYDPDAEHSLIMTRPPNKTREE---------TIDVVVDPVLSRLLRPHQREAVSFVY 265
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK---PLIDKAIIVAPSSL 216
EC+ G + G ++ADEMGLGKTL ITL+WTLL+Q P ++ P+ K +I P +L
Sbjct: 266 ECLMGFKNFKGNGALLADEMGLGKTLTTITLIWTLLKQTPYSEDISPICKKVLITCPVTL 325
Query: 217 VKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
+ NW E KWL R+ L ++ A D + ++++G+ + +L++SYE S
Sbjct: 326 IGNWKKEFKKWLNINRIGVLTVNNKQNASKDKQE---IKSFGKTRIYQVLIMSYEKVLSC 382
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
+ L + +++CDEGHRLKN ++ + L + ++VLL+GTPIQNDL+E++++++F
Sbjct: 383 QNELSTIDFDMLVCDEGHRLKNSSNKVLKVLNDMNISKKVLLTGTPIQNDLVEFYNIINF 442
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE-RLEQLIGIVNRCLIRRTSALL 394
+N +LG+ Q F+K + PILR ++ + + K E + +LI + +RRTS++L
Sbjct: 443 INPSVLGSFQSFQKDFIKPILRSREVNCINKDTIKRGEIKSNELIELTKEFTLRRTSSIL 502
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
S YL KT+ ++ T+LQ L+ ++ S ++ N +L+ IT KK+C
Sbjct: 503 SGYLTEKTDIILFCPPTELQIALFKFVLDSKKFNALLREDNN------SLTLITLFKKIC 556
Query: 455 NHPDLVM-DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
N P L+ DK+ EN + S K+ S+K+ +L +L I
Sbjct: 557 NSPSLLFQDKLFNSL--IENEHDSTIDLTTLSKKTA------SSKVNILIPLLIEINQI- 607
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK--TSNEFIFML 571
DK VL+SNYTQTLDL E + + RLDGS K R K+V FNK S +F+L
Sbjct: 608 GDKTVLISNYTQTLDLLETILHKLNISFSRLDGSTPNKLRDKLVNDFNKQPVSTNSVFLL 667
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNLIGA+RL++FD DWNP+ D QAMAR+ RDGQ KP F+YR ++TG I+EK+
Sbjct: 668 SAKSGGVGLNLIGASRLILFDNDWNPSIDLQAMARIHRDGQTKPVFIYRIMTTGCIDEKI 727
Query: 632 MQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQV 690
QRQ K LS +D + D + F M++L+ LF + E T+S+THD ++C G +
Sbjct: 728 FQRQMMKNNLSDKFLDNKTDSKSNLFDMNDLKDLFTVNEETLSNTHDLLQCDCSGIGEDI 787
Query: 691 KP 692
P
Sbjct: 788 NP 789
>gi|255712323|ref|XP_002552444.1| KLTH0C05038p [Lachancea thermotolerans]
gi|238933823|emb|CAR22006.1| KLTH0C05038p [Lachancea thermotolerans CBS 6340]
Length = 894
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 227/591 (38%), Positives = 343/591 (58%), Gaps = 75/591 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGV-----------------RIEDAYGCIMADEM 179
V+VDP+LS LRPHQR GVKFMY+CV G+ + ++ GC++ADEM
Sbjct: 238 VIVDPILSKHLRPHQRVGVKFMYDCVMGLSRPSQHEDDGKTSCLLQKTDEVQGCLLADEM 297
Query: 180 GLGKTLQCITLMWTLLRQGPLA------------KPLIDKAIIVAPSSLVKNWCNEITKW 227
GLGKTL I L+WTLL+Q P + L +K ++V P +L+ NW E +KW
Sbjct: 298 GLGKTLMTIALIWTLLKQTPTPSKETTSQFGIPLQGLCNKVLVVCPVTLIANWKREFSKW 357
Query: 228 LG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVLHK--NE 283
LG R+ L +D S E D + +F++ + +L++ YE S L + +
Sbjct: 358 LGLNRIGILTLDSKSTPEKDKLHVRNFLRV---QRTYQVLILGYEKLLSVTEALQQESSS 414
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
+GL++CDEGHRLKN +S+T AL L R+VLL+GTPIQNDL E+F+++ F+N GI+G
Sbjct: 415 IGLMVCDEGHRLKNGQSKTLSALNSLDISRKVLLTGTPIQNDLTEFFTIIDFLNCGIMGN 474
Query: 344 AQEFRKQYETPILRGQD--SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
+F++ Y PI R +D + ++ +T+ +R ++LI + +RRT+ +SK+LP K
Sbjct: 475 FSQFKRDYINPITRARDVNNKYNETIQTRGKDRTDELIDATKKFTLRRTADTISKFLPPK 534
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA------LSSITSLKKLCN 455
T+ V+ K T Q + + ++ N +L +++ L+ IT KK+CN
Sbjct: 535 TDVVLFCKPTKSQIQAFEKILT------------NAQLDLSSITPSSSLALITLFKKICN 582
Query: 456 HPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT-TD 514
P L+ D + L + S +G L ++ S KL VL +L I+ +
Sbjct: 583 SPSLI------SQDSY-----YLENIKSKSDLTGCLGLD-SGKLRVLLALLENIRSSYPQ 630
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSK 574
+K+V+VSNYTQTLD+ + + + + RLDG+ K+R ++V FN + F F+LS+K
Sbjct: 631 EKVVIVSNYTQTLDIIQNILTSNRFAFTRLDGNTPTKERDRIVRAFNTVPSLFAFLLSAK 690
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
+GG GLNLIGA+RLV+FD DWNPA D QAM+R+ RDGQ++PCF+YR L+TG I+EK+ QR
Sbjct: 691 SGGVGLNLIGASRLVLFDNDWNPAIDLQAMSRIHRDGQRRPCFIYRLLTTGCIDEKIFQR 750
Query: 635 QAHKKALSSCVVDCEEDVA------RHFSMSELRSLFQLEENTISDTHDKI 679
Q K +LS + +E + F +L+ LF + +T S+THD I
Sbjct: 751 QLMKISLSFRFMGDQESSSSIKADDNLFETDDLKDLFTVLTSTKSNTHDLI 801
>gi|410077175|ref|XP_003956169.1| hypothetical protein KAFR_0C00390 [Kazachstania africana CBS 2517]
gi|372462753|emb|CCF57034.1| hypothetical protein KAFR_0C00390 [Kazachstania africana CBS 2517]
Length = 882
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 230/603 (38%), Positives = 349/603 (57%), Gaps = 85/603 (14%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV----RIE------------DAYGCIMAD 177
QV V+VDP +S ILRPHQ EGVKFMY+C+ + +E D GCI+AD
Sbjct: 211 QVDVIVDPKISKILRPHQVEGVKFMYDCIFHLDRSSSVESNEKNLVLNENFDLNGCILAD 270
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWCNEIT 225
EMGLGKTL I+L+WTLL+Q P +P + K IIV P +L+ NW NE
Sbjct: 271 EMGLGKTLMTISLIWTLLKQTPYPQPENCSQNGITLVGHVKKIIIVCPVTLIMNWRNEFA 330
Query: 226 KWLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHASVL--HK 281
KWL ++ L + + ++D N + +F++ + + +L++ YE S + L
Sbjct: 331 KWLNLNKIGILILKSSNSTDMDKNAIKNFLKI---QNIYQVLILGYEKVLSVSQELISLS 387
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
+ + L++CDEGHRLKN S+ L L K ++LLSGTPIQNDL+E+F+++ F+N I+
Sbjct: 388 SNIDLIVCDEGHRLKNTNSKVLNILKELNVKSKILLSGTPIQNDLIEFFTIIDFINPDII 447
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERL--------EQLIGIVNRCLIRRTSAL 393
G+ +F+K Y PI + +D + K NE + ++LI + ++ ++RRT+A+
Sbjct: 448 GSFNQFKKNYIVPITKARDV------KNKFNENVIETGEIKSQELIDLTSKFILRRTNAI 501
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTN-LIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
L+KYLP +T+ ++ K T Q + N L+ S+ +++ + L + IT KK
Sbjct: 502 LNKYLPPRTDIILFCKPTKEQLTSFDNILLGSNLNFQSLLNNSTSSLAL-----ITLFKK 556
Query: 453 LCNHPDLVMDKIQTGADGFENAMNI-----LPTGYAASYKSGKLLIELSAKLMVLDTMLA 507
+CN P L +D + N ++ +P + + S KL VL +++
Sbjct: 557 ICNSPSLA------NSDPYYNKLSSKDHKQMPRSVSTN----------SGKLKVLVSLVN 600
Query: 508 VIKMTTD--DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
IK + +KIV+VSNYTQTLDL E L +VRLDGS +K+R +V +FN N
Sbjct: 601 SIKKMNNPMEKIVIVSNYTQTLDLIEGLISSLALTFVRLDGSTPVKQRNSIVSSFNNDQN 660
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+F+LS+K+GG GLNLIG +RL++FD DWNP+ D QAM+R+ RDGQKK CF+YR ++TG
Sbjct: 661 VNVFLLSAKSGGVGLNLIGGSRLILFDNDWNPSVDLQAMSRIHRDGQKKHCFIYRLITTG 720
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARH------FSMSELRSLFQLEENTISDTHDKI 679
I+EK++QRQ K LS +D + + + F ++L+ LF + +N+ S+THD I
Sbjct: 721 CIDEKILQRQLMKNNLSLKFLDNDTNNNSNNNNDDLFDKADLKDLFTVVKNSNSNTHDLI 780
Query: 680 KCS 682
CS
Sbjct: 781 -CS 782
>gi|340386198|ref|XP_003391595.1| PREDICTED: DNA repair and recombination protein RAD54-like, partial
[Amphimedon queenslandica]
Length = 437
Score = 389 bits (1000), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/345 (59%), Positives = 247/345 (71%), Gaps = 18/345 (5%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTSRKPLGSVDNEDEPNSKLPMTKEEM 60
RRS APSQ+ +R + G T + KR C+SR+PL + E
Sbjct: 94 RRSCAPSQVKRRLENEENGYNTSSSSL--SKRPCSSRQPLQVIS-------------EST 138
Query: 61 SEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQL 120
+ H I QIL++PFKVPI NYTGG + + LG+RR G + ALHDP NALVLY+P ++
Sbjct: 139 TNHNERILQILSQPFKVPIPNYTGG--ARRGLGMRRCGLKTALHDPFEENALVLYSPREV 196
Query: 121 SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMG 180
SA + LK ++ VHVVVDPVLS +LRPHQREGVKFM++CVTG RI +GCIMADEMG
Sbjct: 197 SAQEQLKTVSSEVDVHVVVDPVLSKVLRPHQREGVKFMWDCVTGQRIHGNHGCIMADEMG 256
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQCITLMWTLL+Q P P IDKAIIV PSSLVKNW NEI KWL GR++ + ID G
Sbjct: 257 LGKTLQCITLMWTLLKQSPKGTPTIDKAIIVTPSSLVKNWYNEIGKWLSGRLSVIAIDSG 316
Query: 241 SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+K EID KL ++ +G R V+P+L+ISYETFR HA +LH GL++CDEGHRLKNCE+
Sbjct: 317 TKEEIDRKLGQYITQHG-RVVSPVLIISYETFRLHAPILHSGSTGLIICDEGHRLKNCEN 375
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
QTY AL LK + RVLLSGTPIQNDLLEYFSL+HFVN GILG Q
Sbjct: 376 QTYTALTQLKTQCRVLLSGTPIQNDLLEYFSLLHFVNTGILGKIQ 420
>gi|367013258|ref|XP_003681129.1| hypothetical protein TDEL_0D03340 [Torulaspora delbrueckii]
gi|359748789|emb|CCE91918.1| hypothetical protein TDEL_0D03340 [Torulaspora delbrueckii]
Length = 912
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 231/586 (39%), Positives = 344/586 (58%), Gaps = 65/586 (11%)
Query: 141 PVLSNILRPHQREGVKFMYECVTGV--------------------RIEDAYGCIMADEMG 180
P++ LRPHQREGVKFMY+CV+G+ R D GC++ADEMG
Sbjct: 249 PLVGKNLRPHQREGVKFMYDCVSGLAKPTGKPPTIDQTTTSLILERDSDISGCLLADEMG 308
Query: 181 LGKTLQCITLMWTLLRQGPLA------------KPLIDKAIIVAPSSLVKNWCNEITKWL 228
LGKTL I L+WTLL+Q P+A + L K +IV P +L+ NW E KWL
Sbjct: 309 LGKTLMTIALIWTLLKQTPMASQVPCSQSGVPLQGLCSKVLIVCPVTLIANWKREFGKWL 368
Query: 229 G-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVLH--KNEV 284
R+ L + + AE D + +F++ + +L+I YE + ++ L K+ +
Sbjct: 369 NLSRIGVLTLSPSNTAEKDKYDVRNFLKV---QRTYQVLIIGYEKLLTVSNELKSGKDAL 425
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
L++CDEGHRLKN S+ L L ++VLLSGTPIQNDL E++++V F+N GILG+
Sbjct: 426 DLLVCDEGHRLKNGASKILNILKSLDIGKKVLLSGTPIQNDLNEFYTVVDFINPGILGSF 485
Query: 345 QEFRKQYETPILRGQDSCASDAERT--KANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
F+K++ PILR +D E K ER +++I I R +RRT+++L+++LP +T
Sbjct: 486 SHFKKRFMNPILRARDPANRYNELAVEKGEERSKEMIEITQRFTLRRTNSILAEFLPPRT 545
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+ ++ K T+ Q + ++++ + +KG ++LS IT LKK+CN P L+
Sbjct: 546 DMILFCKPTEAQVSAFKDILQGAQI--DLKGLN----ANSSLSLITLLKKVCNSPSLI-- 597
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD-DKIVLVS 521
+D F ++ + + +A Y+ S KL VL +L I+ TD +K+V+VS
Sbjct: 598 ----SSDSFYHS-TLENSKISAKYQRALN----SGKLKVLMALLERIRNGTDGEKVVVVS 648
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLN 581
NYTQTLD+ E L + K RLDGS K+R +V +FN+ F F+LS+K+GG GLN
Sbjct: 649 NYTQTLDIIENLMRSADMKTCRLDGSTQSKRRDSIVTSFNRDPTMFAFLLSAKSGGVGLN 708
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
LIGA+RL++FD DWNP+ D QAM+R+ RDGQK+PC++YR ++ G I+EK++QRQ K +L
Sbjct: 709 LIGASRLILFDNDWNPSVDLQAMSRIHRDGQKRPCYIYRLITAGCIDEKILQRQLAKHSL 768
Query: 642 SS---CVVDCEEDVARH--FSMSELRSLFQLEENTISDTHDKIKCS 682
S C E A F+ +L++LF + + S+THD I CS
Sbjct: 769 SQKFLCDNKAENGHADDDLFNKEDLKNLFTVMTDVSSNTHDLI-CS 813
>gi|159470413|ref|XP_001693354.1| hypothetical protein CHLREDRAFT_117345 [Chlamydomonas reinhardtii]
gi|158277612|gb|EDP03380.1| predicted protein [Chlamydomonas reinhardtii]
Length = 526
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 221/514 (42%), Positives = 308/514 (59%), Gaps = 28/514 (5%)
Query: 184 TLQCITLMWTLLRQGPLAK-PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSK 242
TLQ I +WTLL G + P + +++ P+SLV NW E+ W G RVA + +D
Sbjct: 1 TLQAIAALWTLLSDGVHGRRPTCVRPLVLCPASLVANWGKELEFWCG-RVAPVVVDDTRG 59
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
++ + P +LV+ Y+TFRSH + K + +VLCDE H LKN +SQ
Sbjct: 60 DKVRYSM----------PYLVVLVMGYQTFRSHRDAVVKKNIDIVLCDEAHFLKNVDSQL 109
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
+A+ GL A+ R+LL+GTPIQN L E+++++ G+LG FR+ YE PI RG D+
Sbjct: 110 TKAVAGLPARMRLLLTGTPIQNKLQEFYTVMSTAVPGLLGELPAFRRTYELPIQRGSDAD 169
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI 422
ASDAE ER++ ++ + ++RR+ + KYLP K EQVV KM+ LQ LY +
Sbjct: 170 ASDAEAALGMERMDAMLALCGTYMLRRSCNTMKKYLPPKVEQVVFCKMSTLQARLYNFFL 229
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-----MDKIQTGADG------F 471
S AV + N + ++KK+C HPDLV D ++GADG F
Sbjct: 230 NSPAVHVVLL--RNILTSSSFSHCALAVKKMCCHPDLVSTGSCADGCKSGADGRPVVTGF 287
Query: 472 ENAMNIL-PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT-TDDKIVLVSNYTQTLDL 529
E + + A YK G S K+ VL+ ML ++ + + DK+VLVSNYT+ LD+
Sbjct: 288 EGCLPLFGEASVAPVYKPGSCQAYHSGKVAVLEMMLKAVRDSGSGDKVVLVSNYTEALDI 347
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRL 588
E + + + ++RLDG +KKR +V+ FN ++ F+ +LSSKAGG GLN+IGANRL
Sbjct: 348 LEGMCRAHAWAFLRLDGGCDVKKRQPLVDCFNDPAHPSFLLLLSSKAGGVGLNIIGANRL 407
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
V+FDPDWNPAND QAMARVWR GQKK ++YR L+TGSIEEK+ QRQ K+ LS+ +VD
Sbjct: 408 VLFDPDWNPANDLQAMARVWRQGQKKKVWIYRLLTTGSIEEKVYQRQVAKQGLSAAIVDN 467
Query: 649 EEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
D +R FS ELR+LF++ T DTH IKCS
Sbjct: 468 SNDQSRTFSAEELRALFEVNTTTRCDTHGAIKCS 501
>gi|302309194|ref|NP_986455.2| AGL212Wp [Ashbya gossypii ATCC 10895]
gi|299788244|gb|AAS54279.2| AGL212Wp [Ashbya gossypii ATCC 10895]
gi|374109700|gb|AEY98605.1| FAGL212Wp [Ashbya gossypii FDAG1]
Length = 903
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 237/604 (39%), Positives = 352/604 (58%), Gaps = 66/604 (10%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV-RIE--------------DAYGCIMADE 178
+V VVVDP+LS LR HQR G+KFMY+CV G+ R E D GC++ADE
Sbjct: 240 EVEVVVDPILSKKLRQHQRTGIKFMYDCVRGLARSEKDDDRTVMILEYDSDVKGCLLADE 299
Query: 179 MGLGKTLQCITLMWTLLRQGP------------LAKPLIDKAIIVAPSSLVKNWCNEITK 226
MGLGKT I L+WTLL+Q P + + K ++V P +L+ NW E K
Sbjct: 300 MGLGKTCMTIALIWTLLKQHPRPSSVPCSQLGVALQGICQKVLVVCPVTLIGNWKKEFIK 359
Query: 227 WLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHASVLH--KN 282
WL R+ L + + E D N + +F++ + +L++ YE + S L K+
Sbjct: 360 WLPMNRIGILTLSSKNTPEKDKNDVRNFLRV---QRTYQVLILGYEKLLNVFSELDQAKS 416
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
++ L++CDEGHRLKN S+ + L L+ +R+V+L+GTPIQNDL E++++++F+N GILG
Sbjct: 417 KLDLLICDEGHRLKNSSSKILKCLTDLEIERKVILTGTPIQNDLNEFYTIINFINPGILG 476
Query: 343 TAQEFRKQYETPILRGQD--SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
T F++ Y TPI R +D + +D + R + LI I + ++RRTS++++ YLP
Sbjct: 477 TFAHFKRVYITPITRARDVNNKHNDQIVSLGESRSQDLIEITKKFILRRTSSIIADYLPP 536
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
+T+ VV K T Q + + ++ V N+ LG+ IT KK+CN P LV
Sbjct: 537 RTDIVVFCKPTQHQLDAFNQVLVGTRVD-FQNMSFNSSLGL-----ITLFKKICNSPSLV 590
Query: 461 MDK--IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD-KI 517
Q+ +G A+ I A S SGKL VL ++L I +D+ K+
Sbjct: 591 SSDSYFQSKVNGGTPALRI-----AQSTTSGKL--------KVLMSLLHQIAHRSDNEKV 637
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGG 577
V++SNYTQTLD+ L Y+RLDGS K+R +V FN++ F F+LS+K+GG
Sbjct: 638 VVISNYTQTLDIIGNLMSSASLSYLRLDGSTPTKERDAIVNDFNRSQTIFGFLLSAKSGG 697
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+ QRQ
Sbjct: 698 VGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKIFQRQLM 757
Query: 638 KKALSSCVVD--CEEDVARH-FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVK--- 691
K LS +D C++ + + F +L+ LF ++ T+S+THD + CS +G + +
Sbjct: 758 KNNLSKKFLDDHCDDKSSDNVFEQEDLKDLFSVQSGTLSNTHD-LLCSCEGSGEEFEDTN 816
Query: 692 -PPP 694
PPP
Sbjct: 817 TPPP 820
>gi|344238474|gb|EGV94577.1| DNA repair and recombination protein RAD54-like [Cricetulus
griseus]
Length = 306
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/296 (62%), Positives = 231/296 (78%), Gaps = 8/296 (2%)
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
LKKLCNHP L+ DK +G DGFE+ ++I P GY S + +LS K++VLD +LA+
Sbjct: 12 LKKLCNHPALIYDKCVSGEDGFEDTLDIFPPGYT----SKAVEPQLSGKMLVLDYILAMT 67
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFI 568
+ + DK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+
Sbjct: 68 RSRSSDKVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFV 127
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
FMLSSKAGGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IE
Sbjct: 128 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIE 187
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
EK+ QRQ+HKKALSSCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN
Sbjct: 188 EKIFQRQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNRR 247
Query: 689 QVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
QV PPP SDCT DL+ W+H T+KR L D +L+ W A ++FVF+ S + ++
Sbjct: 248 QVWPPPDGSDCTSDLAQWNHSTDKRGLQDEVLQAAWDASPTAITFVFHHRSHEEQR 303
>gi|363749975|ref|XP_003645205.1| hypothetical protein Ecym_2678 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888838|gb|AET38388.1| Hypothetical protein Ecym_2678 [Eremothecium cymbalariae
DBVPG#7215]
Length = 919
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 233/589 (39%), Positives = 347/589 (58%), Gaps = 64/589 (10%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV-RIE--------------DAYGCIMADE 178
+V ++VDP+LS LRPHQR GVKFMY+C+ G+ R E D GC++ADE
Sbjct: 254 EVEIIVDPLLSKTLRPHQRIGVKFMYDCIRGLSRPENDDVQKDITLEYDGDIKGCLLADE 313
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKP--------------LIDKAIIVAPSSLVKNWCNEI 224
MGLGKT ITL+WTLL+Q P KP + K ++V P +L+ NW E
Sbjct: 314 MGLGKTYMTITLIWTLLKQHP--KPSNVPCSQSGVALQGMCHKILVVCPVTLIGNWKKEF 371
Query: 225 TKWLG-GRVAALPIDGGSKAEID-NKLNSFMQTYGRRPVNPILVISYETFRSHASVLH-- 280
TKWL ++ L + + E D + + +F++ + +L++ YE + S L
Sbjct: 372 TKWLPLNKIGVLTLSNKNTPEKDKSDVRNFLRV---QRTYHVLILGYEKLLAVVSELEQG 428
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
KN++GL++CDEGHRLKN S+ + L L R+V+L+GTPIQNDL E++++++F+N GI
Sbjct: 429 KNKLGLLVCDEGHRLKNANSKILKCLTDLDIDRKVILTGTPIQNDLNEFYTIINFINPGI 488
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKA--NERLEQLIGIVNRCLIRRTSALLSKYL 398
LG+ F++ Y PI R +D +E+ ++ + + LI I R +RRTS++++ YL
Sbjct: 489 LGSFSCFKRTYINPITRARDVNNRFSEKIQSLGESKSQDLIEITKRFTLRRTSSIIANYL 548
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P KT+ V+ K T Q E + L+ + + + ++ LG+ IT KK+CN P
Sbjct: 549 PPKTDLVIFCKPTVHQIETFKMLLLAGQID-FQRLQTSSSLGL-----ITLFKKVCNSPS 602
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL-SAKLMVLDTMLAVIKMTTD-DK 516
L+ + ++N + K KL+ + S KL VL ++L+ I+ TD +K
Sbjct: 603 LI-----SSDPYYQNTIQ-------NHGKFAKLVNSIDSGKLKVLMSLLSHIRNNTDGEK 650
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAG 576
+V+VSNYTQTLD+ + L +VRLDGS K+R +V FN + N F F+LS+K+G
Sbjct: 651 VVIVSNYTQTLDIIQGLMASSSLSFVRLDGSTPAKERDSIVSLFNSSPNVFGFLLSAKSG 710
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GLNLIGA+RL++FD DWNP+ D QAM+R+ RDGQK+PCF+YR ++TG I+EK+ QRQ
Sbjct: 711 GVGLNLIGASRLILFDNDWNPSVDLQAMSRIHRDGQKRPCFIYRLVTTGCIDEKIFQRQL 770
Query: 637 HKKALSSCVVDCEEDVARH---FSMSELRSLFQLEENTISDTHDKIKCS 682
K LS +D D + F +L+ LF ++ T +THD I CS
Sbjct: 771 MKNNLSKKFLDNHLDEKTNDNLFEKEDLKDLFTIQTATKCNTHDLI-CS 818
>gi|50294037|ref|XP_449430.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528744|emb|CAG62406.1| unnamed protein product [Candida glabrata]
Length = 920
Score = 387 bits (995), Expect = e-104, Method: Compositional matrix adjust.
Identities = 242/598 (40%), Positives = 348/598 (58%), Gaps = 76/598 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV-----------------RIEDAYGCIMA 176
+V ++VDP+L +LR HQR GVKFMY+C+ G+ R D GCI+A
Sbjct: 254 EVDIIVDPLLCKMLRNHQRIGVKFMYDCLLGLETNLTAESTDDKSCRLERDSDIKGCILA 313
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAK---------PL---IDKAIIVAPSSLVKNWCNEI 224
D+MGLGKTL ITL+WTLL+Q P A PL I K +IV P +L+ NW E
Sbjct: 314 DDMGLGKTLMTITLIWTLLKQTPFASKVQCSQLGVPLSGMISKVVIVCPVTLIGNWKREF 373
Query: 225 TKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQ---TYGRRPVNPILVISYETFRSHASVL 279
KWLG R+ L ++ + ++D + +F++ TY +L++ YE + L
Sbjct: 374 KKWLGLNRIGILTLNPKNNVDMDKISVRNFIKVNRTY------QVLILGYEKVLTVQEEL 427
Query: 280 --HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
K+++ L++CDEGHRLKN S+ + L L ++V+L+GTPIQNDL E+F+++ FVN
Sbjct: 428 LKQKDKLDLLICDEGHRLKNGASKILKVLKSLDIDKKVILTGTPIQNDLNEFFTIIDFVN 487
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAERTK----ANERLEQLIGIVNRCLIRRTSAL 393
G+LGT F+K Y PI R +D ++ TK E+ QLI R ++RR++ +
Sbjct: 488 PGVLGTYASFKKLYINPISRARD--INNKFNTKVIEQGEEKSNQLIEFTKRFILRRSNNI 545
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKK 452
LSK+LP KT+ ++ + T Q + + ++I++ VR M NT LG+ L +KK
Sbjct: 546 LSKFLPPKTDIILFCRPTIEQIKAFRDIIEN--VRVDMNNITFNTSLGLINL-----MKK 598
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
+CN P L+ + D + + N+ + S KS S KL VL +L IK T
Sbjct: 599 VCNSPSLLCN------DPYYQS-NVDSNIFTVSNKSNS-----SGKLTVLLELLLEIKAT 646
Query: 513 TD-DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
+ +K+V+VSNYTQ+LD+ + L RLDG+ K+R +V TFN N F F+L
Sbjct: 647 SPMEKVVIVSNYTQSLDIIQGLMNSNQLSNCRLDGATPAKQRDMLVNTFNNNPNIFGFLL 706
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+KAGG GLNLIGA+RLV+FD DWNPA D QAM+R+ R+GQK+PC++YR ++TG I+EK+
Sbjct: 707 SAKAGGVGLNLIGASRLVLFDNDWNPAVDLQAMSRIHREGQKRPCYIYRLITTGCIDEKI 766
Query: 632 MQRQAHK-----KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC 684
+QRQ K K LSS D F S+L+ LF + +NT S+THD I RC
Sbjct: 767 LQRQLMKHNLTRKFLSSNTSDTGSANDDLFDKSDLKDLFTIHQNTKSNTHDLI--CRC 822
>gi|6599160|emb|CAB63724.1| hypothetical protein [Homo sapiens]
Length = 580
Score = 387 bits (993), Expect = e-104, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 338/597 (56%), Gaps = 60/597 (10%)
Query: 183 KTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGG 240
KTLQCI+L+WTL QGP KP+I K +IV P SLV NW E KWLG R+ +D
Sbjct: 1 KTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQ- 59
Query: 241 SKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
D+K+ F+++ +L+ISYE + + L++CDEGHRLKN
Sbjct: 60 -----DHKVEEFIKSI----FYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAI 110
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
+T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN GILG+ +RK YE PI+ ++
Sbjct: 111 KTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSRE 170
Query: 361 SCASDAERTKANERLE-QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
AS+ E+ + L+ ++ +RRT +++KYLP K E VV + LQ ELY
Sbjct: 171 PSASEEEKELGEREEQLNLLASLDSLYLRRTQEIINKYLPPKIENVVFCRPGALQIELYR 230
Query: 420 NLIKSDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHPDLVMDKIQ-----TGADG--- 470
L+ S VR ++G EN+ L I +LKKLCNHP L+ + I+ + D
Sbjct: 231 KLLNSQVVRFCLQGLLENSP----HLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEE 286
Query: 471 ---FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQT 526
++ +++ P Y + K S KL VL +LAVI ++ +K+VLVSNYTQT
Sbjct: 287 KSLYKGLLSVFPADYNPLLFTEKE----SGKLQVLSKLLAVIHELRPTEKVVLVSNYTQT 342
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGA 585
L++ + + K GY Y RLDG I +R ++V+ FN + S+ FIF+LSSKAGG GLNLIG
Sbjct: 343 LNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGG 402
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
+ L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEEK+ QRQ K+ L V
Sbjct: 403 SHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAV 462
Query: 646 VDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCV-----NGIQVKPPPLESDC 699
VD + FS+ EL++LF L E++ THD + C C G ++ + DC
Sbjct: 463 VDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGEEVHTGDSLEKFIVSRDC 521
Query: 700 ----------------TDDLSCWHHVTEKRW-LVDPILKHCWGAGVSFVFYQHSTKA 739
L W H + L DP L+ VSF+F +T+A
Sbjct: 522 QLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-TENVSFIFQNITTQA 577
>gi|448099761|ref|XP_004199216.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
gi|359380638|emb|CCE82879.1| Piso0_002634 [Millerozyma farinosa CBS 7064]
Length = 857
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 229/596 (38%), Positives = 348/596 (58%), Gaps = 42/596 (7%)
Query: 99 ARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFM 158
R +L+ + ++LV+ PP LS DK+ VV P+LS LRPHQ + V F+
Sbjct: 197 VRSSLY-TVSQDSLVMSKPPGLSP--------DKVVDVVVD-PILSKHLRPHQSDAVCFL 246
Query: 159 YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP---LAKPLIDKAIIVAPSS 215
Y+C+ G + G ++ADEMGLGKTL I ++WTLL+Q P + P+ K +I P S
Sbjct: 247 YDCIMGFKNFGGNGTLLADEMGLGKTLTTIAVIWTLLKQNPYLEVDSPVCKKVLITCPVS 306
Query: 216 LVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
L++NW E KWLG R+ L ++ A D+K+ + ++G+ V +++ISYE +
Sbjct: 307 LIQNWSKEFKKWLGLNRIGILALNSKQNAA-DDKVQ--ISSFGKTRVYQVMIISYEKVLT 363
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
L + L++CDEGHRLK ++ Q L ++ K ++LL+GTPIQNDL E++++V+
Sbjct: 364 CRKELMDLNIDLLVCDEGHRLKTATNKVMQTLNQMQIKMKILLTGTPIQNDLYEFYNIVN 423
Query: 335 FVNQGILGTAQEFRKQYETPILRGQD-SCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F+N G+LGT F+K++ PI R +D +C + E+ +L+ + + ++RR+S++
Sbjct: 424 FINPGVLGTPSHFQKEFVKPISRARDMNCTNKVILDFGEEKSNELLTLTRQFVLRRSSSV 483
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK--GGENTKLGMTALSSITSLK 451
LS LP KT+ ++ + LQ ++ + S A ++ N LG+ IT +K
Sbjct: 484 LSHVLPDKTDIIIFCPPSSLQLFMFKAISSSQAFNSFLQSQASVNNSLGI-----ITVMK 538
Query: 452 KLCNHPDLVM-DKIQTGADGFENAMNILPTGYAASYKSGK--LLIELSAKLMVLDTMLAV 508
KLCN P L+ DK+ I Y SGK LLI L +L +
Sbjct: 539 KLCNSPSLLANDKLFKEIIKSCQESKIDLESLHKRYSSGKVNLLIPL---------LLEI 589
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-- 566
++ +KIVL+SNYTQTLDLFE + + ++RLDGS K R +V FN ++ E
Sbjct: 590 CELK--EKIVLISNYTQTLDLFENILRKLNISFLRLDGSTLGKSRDNIVNEFNNSTFEKA 647
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
+F+LS+K+GG GLNLIGA+RL++FD DWNP+ D QAMAR+ RDGQKKP F+YR +TG
Sbjct: 648 SVFLLSAKSGGFGLNLIGASRLILFDNDWNPSVDLQAMARIHRDGQKKPVFIYRLFTTGC 707
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKC 681
I+EK+ QRQ K+ LS VD +E F +++L+ +F + T +THD ++C
Sbjct: 708 IDEKIFQRQLMKQKLSEKFVDNKEGSQLDLFDINDLKDIFTIHYGTKCNTHDLLQC 763
>gi|190345413|gb|EDK37294.2| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC
6260]
Length = 888
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 224/572 (39%), Positives = 332/572 (58%), Gaps = 39/572 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ +D L ++LRPHQ+E V F++ECVTG R G ++ADEMGLGKTL I L+W L+R
Sbjct: 253 IDIDSKLDSVLRPHQKEAVAFLHECVTGQRSYQGKGALLADEMGLGKTLSTIALIWKLVR 312
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
+ + +K +IV P +L+ NW E KW+ R+ L I+G A D + ++
Sbjct: 313 RNSDGVQVCNKVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAADKQ---DIKN 369
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G+ V +L++ YE + AS L + + L++CDEGHRLK+ ++ + L L ++++
Sbjct: 370 FGKNRVYNVLIMGYEKVLTCASELSEIKFDLLVCDEGHRLKSSTNKVLKVLKHLDVEKKI 429
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+L+GTPIQNDL+E+F++V F+N GILG+ F+K Y ILR +D ++ E + L
Sbjct: 430 VLTGTPIQNDLVEFFTIVDFINPGILGSFSSFQKDYIRHILRSRDVNCTNKEIIDRGDLL 489
Query: 376 E-QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+LI + N +RRTS +LS +L KT+ ++ K T LQ L+ ++ +S + + G
Sbjct: 490 SSKLIALTNEFTLRRTSDILSSFLTTKTDVILFCKPTTLQLSLFEDIKRSKTFKASYSGS 549
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVM--DKIQ----TGAD-GFENAMNILPTGYAASYK 487
LG+ IT KK+CN P L+ K++ +G+D G +N +G
Sbjct: 550 RGGILGL-----ITLFKKICNSPSLLAPEGKVEESELSGSDFGLNVELNNKTSGKLLVLI 604
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
L I+ +K+VLVSNYTQTL L E+ K +RLDG+
Sbjct: 605 PLLLEIQ-----------------RLGEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGT 647
Query: 548 MTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
K+R K+V FNK+S E IF+LS+KAGG GLNL+GA+RL++FD DWNP+ D QAMA
Sbjct: 648 TANKERDKLVNQFNKSSAESTMIFLLSAKAGGVGLNLVGASRLILFDNDWNPSVDLQAMA 707
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSL 664
R+ RDGQK+P F+YR L+TG I+EK+ QRQ K LS +D + D F +L+ L
Sbjct: 708 RIHRDGQKRPVFIYRLLTTGCIDEKIFQRQLMKNNLSDKFLDNKVDSKTDVFDSDDLKDL 767
Query: 665 FQLEENTISDTHDKIKCSRCVNGIQVKPPPLE 696
F + E T S THD ++C C ++ PLE
Sbjct: 768 FSVSE-TSSSTHDLLEC-ECGGDGELAEVPLE 797
>gi|260941370|ref|XP_002614851.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720]
gi|238851274|gb|EEQ40738.1| hypothetical protein CLUG_04866 [Clavispora lusitaniae ATCC 42720]
Length = 885
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 227/581 (39%), Positives = 339/581 (58%), Gaps = 38/581 (6%)
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
+A +LVL P +A+D V VDP+L+ L+PHQR+GV F+Y C+ G+
Sbjct: 265 SAAPSLVLPAPKIPNAND------------VSVDPLLTKHLKPHQRDGVSFVYSCLLGIH 312
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--KPLIDKAIIVAPSSLVKNWCNEI 224
+ +G ++ADEMGLGKTL IT++WTLL+Q P K + K +I P SL+ NW E
Sbjct: 313 QPNYFGALLADEMGLGKTLMTITVIWTLLKQSPFPGQKKVASKVLICCPVSLIDNWRREF 372
Query: 225 TKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
TKWLG R+ L ++ + +K + + +G+ V +L++SYE S + L
Sbjct: 373 TKWLGTYRIGVLCLNNKQVSPAKDKDD--IVNFGKNNVYQVLIMSYEKTLSCSKELDALN 430
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
+ +++CDEGHRLK+ ++ ++ L L ++R+LL+GTPIQNDL E++++++F+N GILGT
Sbjct: 431 LDILVCDEGHRLKSGSNRVFKVLSALSVEKRLLLTGTPIQNDLNEFYTIINFINPGILGT 490
Query: 344 AQEFRKQYETPILRGQDSCASDAERTK-ANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
EF+K Y PILR +D D + + ++ +LI + ++RRT ++S L KT
Sbjct: 491 QSEFQKNYLRPILRARDVNCHDLKIIREGKDKSAELIQLTKSFILRRTKDIISNCLTRKT 550
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+ ++ T +QK L+ + KS M+ L M I +K+CN P L+ +
Sbjct: 551 DVIIFCAPTKVQKSLFEAVSKSSKFNSVMRSETKDVLSM-----ILMFRKICNSPSLLHN 605
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
+ + ++ P +S +G +K+ VL +L + T +K+VLVSN
Sbjct: 606 DPLFASFLHDTELSSSP---LSSRTTG-------SKVNVLVPLLLEFR-TVGEKVVLVSN 654
Query: 523 YTQTLDLFER-LSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLN 581
Y QTLD E LSKL +Y RLDGS K R K+V FNK IF+LS+KAGG GLN
Sbjct: 655 YAQTLDFLETVLSKL-NLQYCRLDGSTPAKVRDKLVLDFNKCPTHKIFLLSAKAGGVGLN 713
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
L+GA+RL++FD DWNP+ D QAMARV R GQ KP F+YR +TG+I+EK+ QRQ K L
Sbjct: 714 LVGASRLILFDNDWNPSVDLQAMARVHRYGQTKPVFIYRLFTTGAIDEKIFQRQLMKNNL 773
Query: 642 SSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKC 681
S +D + A + F +L+ LF + + T +THD I+C
Sbjct: 774 SDMFLDEKSSSASNIFDFEDLKDLFTIAD-TNCNTHDLIEC 813
>gi|409044603|gb|EKM54084.1| hypothetical protein PHACADRAFT_29344 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1116
Score = 383 bits (984), Expect = e-103, Method: Compositional matrix adjust.
Identities = 231/603 (38%), Positives = 331/603 (54%), Gaps = 51/603 (8%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP AP A+V+ +P +AH K+ V VV+DP+++ LRPHQ EGVKFMYECV
Sbjct: 372 HDPDAPGAVVMKSPD--TAHIAKYNKKNAPVVPVVIDPIIARKLRPHQIEGVKFMYECVM 429
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWC 221
++ D GCI+ADEMG+GKTLQ ITL+WTLL+Q P A P++ K +IV P +L+KNW
Sbjct: 430 AMQGHDGRGCILADEMGMGKTLQTITLVWTLLKQNPYAGLGPIVGKVMIVCPVTLIKNWK 489
Query: 222 NEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK 281
NE KWLG + K+ I +NS ++ +L+I YE R+ S L
Sbjct: 490 NEFHKWLGRDRLGIFTGDKDKSTIKQFVNSR--------IHHVLIIGYERLRTVISELQY 541
Query: 282 --NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+GL++CDEGHRLK+ ++T L RR++LSGTPIQNDL E+ ++ F N
Sbjct: 542 CIPPIGLIICDEGHRLKSASNKTSTMFEVLTTPRRIILSGTPIQNDLGEFHAMADFCNPD 601
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
+LG F+K YE PIL+ + S ER RLEQL+ ++RR +++L YLP
Sbjct: 602 LLGNYNNFKKLYEVPILKSRAPGCSTKERELGEARLEQLLETAKSFVLRRDASILKNYLP 661
Query: 400 VK----TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN 455
K E VV I T LQ++++ ++ +D + ++ L + + L K+ N
Sbjct: 662 PKRLHVDEYVVFITPTQLQRDIFRQILTADKLDNLVRNSTAESLALIGM-----LTKVSN 716
Query: 456 HPDLV---MDKI-QTGADG---------FENAMNILPTGYAASYKSGKLLIELSAKLMVL 502
P L+ DK + G D F A +LP ++ + LS KL+ L
Sbjct: 717 SPILLKAAADKAREQGRDAEGELIKKNVFMEAARLLPE------RAQVDDVSLSGKLIAL 770
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
+L + TD+K ++VS+YT TL++ E K + Y Y+RLDGS +KR V FNK
Sbjct: 771 ANLLRALYKGTDEKCIVVSHYTSTLNIIEAFCKKKQYTYLRLDGSTAAQKRQDYVNEFNK 830
Query: 563 T--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
+ FIF+LSSKAGG GLNLIGA+RL + D DWNP+ Q + + DG + +
Sbjct: 831 SLQRQRFIFLLSSKAGGVGLNLIGASRLCLIDSDWNPS---QWLG--YTDGTSRAVLRWH 885
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVV--DCEEDVARHFSMSELRSLFQLEENTISDTHDK 678
+ +I EK+ QRQ K LS + E + F+ +LR +F + NT THD
Sbjct: 886 GANVLAIAEKIYQRQVTKLGLSDSFLGKGGSESKSDSFTRKDLRDIFTIHPNTACHTHDL 945
Query: 679 IKC 681
++C
Sbjct: 946 LEC 948
>gi|149239807|ref|XP_001525779.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449902|gb|EDK44158.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1139
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/562 (37%), Positives = 329/562 (58%), Gaps = 41/562 (7%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V V +DP L++ LRPHQ EGV FMYECV G R GC++ADEMGLGKTL IT +WTL
Sbjct: 491 VKVSIDPHLASKLRPHQIEGVTFMYECVMGFRDFVGNGCLLADEMGLGKTLMTITTIWTL 550
Query: 195 LRQGPLA---KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLN 250
L+Q P KP+++K +IV P +L+ NW E KWLG ++ L ++ + + +N
Sbjct: 551 LKQNPFPDQKKPIVNKVLIVCPVTLINNWKAEFKKWLGTNKLNVLTLNNPMSDDKRDIVN 610
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+GR V +L+I+YE +H L L++CDEGHRLKN ++ L L
Sbjct: 611 -----FGRLNVYQVLIINYEKVLAHLEELQTVNFDLLVCDEGHRLKNSSNKVLINLHKLL 665
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD-SCASDAERT 369
+R++L+GTPIQN L+E+ +L+ F+N +L + F++++ PI + +D +C + +
Sbjct: 666 IPKRIVLTGTPIQNYLVEFHTLISFINPAVLPDMKTFQRKFINPITQARDVNCFNPEVKR 725
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
K E ++LI + ++ ++RRT LL YL KT+ ++ + T LQ +++ LI+S +
Sbjct: 726 KGEELSKELIRLTHKFILRRTQDLLEGYLTPKTDILLFVPPTQLQIDIF-QLIRSSEKFK 784
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
++ G +T+L+ I +K+CN P L+ D F I + S SG
Sbjct: 785 YLEPG------LTSLALINVFRKICNSPSLL------ATDEF--YQKIATNTFKLSTSSG 830
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
K+ + + L + + ++ VL+SNYT+TLDL E + + +Y RLDGS
Sbjct: 831 KIHVLIPLLLEITEC---------KERTVLISNYTKTLDLLEHVLRKLNLRYTRLDGSTP 881
Query: 550 IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
R K+V FN+ +F+LSSK+GG G+NL+GA+RL++FD DWNP+ D Q+++R+ R
Sbjct: 882 NNMRNKLVNEFNRNEEIHVFLLSSKSGGMGINLVGASRLILFDNDWNPSTDLQSLSRIHR 941
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE----DVARHFSMSELRSLF 665
DGQ KPCF+YR + G I+EK+ QRQ K LSS +D + DV F +L++LF
Sbjct: 942 DGQTKPCFIYRLFTAGCIDEKIFQRQLMKSKLSSKFLDNDNASKTDV---FEQEDLKNLF 998
Query: 666 QLEENTISDTHDKIKCSRCVNG 687
++ + S+TH+ + CS +G
Sbjct: 999 EVNVGSKSNTHELLGCSCAGDG 1020
>gi|146419519|ref|XP_001485721.1| hypothetical protein PGUG_01392 [Meyerozyma guilliermondii ATCC
6260]
Length = 888
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 226/568 (39%), Positives = 334/568 (58%), Gaps = 31/568 (5%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ +D L +LRPHQ+E V F++ECVTG R G ++ADEMGLGKTL I L+W L+R
Sbjct: 253 IDIDSKLDLVLRPHQKEAVAFLHECVTGQRSYQGKGALLADEMGLGKTLSTIALIWKLVR 312
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
+ + +K +IV P +L+ NW E KW+ R+ L I+G A D + ++
Sbjct: 313 RNSDGVQVCNKVLIVCPVTLIANWNREFKKWIDINRLGVLSINGKQGAAADKQ---DIKN 369
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G+ V +L++ YE + AS L + + L++CDEGHRLK+ ++ + L L ++++
Sbjct: 370 FGKNRVYNVLIMGYEKVLTCASELSEIKFDLLVCDEGHRLKSSTNKVLKVLKHLDVEKKI 429
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+L+GTPIQNDL+E+F++V F+N GILG F+K Y ILR +D ++ E + L
Sbjct: 430 VLTGTPIQNDLVEFFTIVDFINPGILGLFSSFQKDYIRHILRSRDVNCTNKEIIDRGDLL 489
Query: 376 E-QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
+LI + N +RRTS +LS +L KT+ ++ K T LQ L+ ++ +S + + G
Sbjct: 490 SSKLIALTNEFTLRRTSDILSSFLTTKTDVILFCKPTTLQLSLFEDIKRSKTFKASYSGS 549
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD---GFENAMNILPTGYAASYKSGKL 491
LG+ IT KK+CN P L+ + + G + +N+ +L
Sbjct: 550 RGGILGL-----ITLFKKICNSPSLLAPEGKVEESELLGLDFGLNV------------EL 592
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
+ S KL+VL +L I+ +K+VLVSNYTQTL L E+ K +RLDG+ K
Sbjct: 593 NNKTSGKLLVLIPLLLEIQRL-GEKVVLVSNYTQTLKLLEQSVNKLNMKSLRLDGTTANK 651
Query: 552 KRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
+R K+V FNK S E IF+LS+KAGG GLNL+GA+RL++FD DWNP+ D QAMAR+ R
Sbjct: 652 ERDKLVNQFNKLSAESTMIFLLSAKAGGVGLNLVGASRLILFDNDWNPSVDLQAMARIHR 711
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLE 668
DGQK+P F+YR L+TG I+EK+ QRQ K LS +D + D F +L+ LF +
Sbjct: 712 DGQKRPVFIYRLLTTGCIDEKIFQRQLMKNNLSDKFLDNKVDSKTDVFDSDDLKDLFSVS 771
Query: 669 ENTISDTHDKIKCSRCVNGIQVKPPPLE 696
E T S THD ++C C ++ PLE
Sbjct: 772 E-TSSSTHDLLEC-ECGGDGELAEVPLE 797
>gi|207345463|gb|EDZ72281.1| YGL163Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 405
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 200/408 (49%), Positives = 270/408 (66%), Gaps = 12/408 (2%)
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+ ++++ Q GR V P+L+ISYET R + L VGL+L DEGHRLKN +S T+
Sbjct: 4 VSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFT 63
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL + RRV+LSGTPIQNDL EYF+L+ F N G+LG+ EFRK +E PILRG+D+ A+
Sbjct: 64 ALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADAT 123
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
D E TK +L++L IV++ +IRRT+ +L+KYLP K E V+ + + LQ ELY LIKS
Sbjct: 124 DKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKS 183
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI--LPTGY 482
R +K G L +I LKKLCNHP+L+ + + + + +P
Sbjct: 184 ----REVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYNMPGSK 239
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
A ++ + SAK +L+ L IK +DDKIVL+SNYTQTLDL E++ + + Y V
Sbjct: 240 ARDVQT-----KYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLIEKMCRYKHYSAV 294
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDG+M+I KR K+V+ FN EFIF+LSSKAGGCG+NLIGANRL++ DPDWNPA D
Sbjct: 295 RLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQ 354
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
QA+ARVWRDGQKK CF+YRF+STG+IEEK++ + ++ CE
Sbjct: 355 QALARVWRDGQKKDCFIYRFISTGTIEEKILSKTIYENEFEFMRGRCE 402
>gi|388855888|emb|CCF50463.1| related to RAD54-DNA-dependent ATPase of the Snf2p family [Ustilago
hordei]
Length = 1070
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 227/594 (38%), Positives = 333/594 (56%), Gaps = 37/594 (6%)
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
DP P+A+V+ P +AH K V VV+DP L+ LRPHQ +GVKF+YE V G
Sbjct: 290 DPNDPDAIVMKRPD--AAHQKKYNTKGHPIVDVVLDPQLAKALRPHQVQGVKFLYERVMG 347
Query: 165 VRI--EDAYGCIMADEMGLGKTLQCITLMWTLLRQG---PLAKPLIDKAIIVAPSSLVKN 219
+ + GCI+AD+MGLGKTLQ I L+ TL +Q I +A++V P +LVKN
Sbjct: 348 MHANSDKGRGCILADQMGLGKTLQTIALILTLAKQNCYYTSRSATIHRALVVCPLTLVKN 407
Query: 220 WCNEITKWLGGR---VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
W E KW+G V ++ D G K ++ + R ++VI YE R+
Sbjct: 408 WKREFRKWIGNNALNVLSIDQDRGRKD---------VERFARSSSYNVMVIGYEKLRTVI 458
Query: 277 SVL-HKNE-VGLVLCDEGHRLKNCESQTYQALMGLK-AKRRVLLSGTPIQNDLLEYFSLV 333
++ H N V L++CDEGHRLKN E+Q L RR++LSGTPIQN L E +LV
Sbjct: 459 EIVKHANPPVDLIVCDEGHRLKNKEAQITTIFDDLSFCNRRIILSGTPIQNHLSELHALV 518
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
FV+ LGT EFR+ +E PI+R + S + R L + N ++RRT+ +
Sbjct: 519 SFVDDEALGTYDEFRRIFEEPIIRSRAPHCSRQIQATGQARAAALKRLTNDVILRRTADI 578
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L +LP K E V+ + Q +Y +++ S+ VR ++G L I L+KL
Sbjct: 579 LVDFLPPKKEMVLFCSPSQEQLRIYQSILASNHVRSILQGEPGN-----GLLQIGVLRKL 633
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL---IELSAKLMVLDTMLAVIK 510
CN P+L++ ++ A+ G+ S+ + S KL+ L +L ++
Sbjct: 634 CNTPELLLKDCESSGQTPTKAL----LGHLGSFFPPNFVRNEARYSGKLICLMNLLETVR 689
Query: 511 MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS--NEFI 568
T+DK+VLVS++T TLD E + + + Y Y+RLDG +R +V FN+ + F+
Sbjct: 690 AQTEDKVVLVSSFTSTLDTVEAMVRKKRYSYLRLDGKTPQDERMAMVNQFNRQAVDKSFV 749
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LS+K+GG GLNLIGANRLV+ D DWNP+ D QAMAR+ RDGQ K C++YR L +G+++
Sbjct: 750 FLLSAKSGGVGLNLIGANRLVLIDSDWNPSTDLQAMARIHRDGQNKVCYIYRLLLSGTMD 809
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARH-FSMSELRSLFQLEENTISDTHDKIKC 681
EK+ QRQ K LS ++D E+ A FS EL+ +F L ++ +H ++ C
Sbjct: 810 EKIYQRQISKLGLSDSLMDSEKKSASDTFSQQELKDIFTLHLDSACISHRQLVC 863
>gi|118383249|ref|XP_001024779.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila]
gi|89306546|gb|EAS04534.1| SNF2 family N-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 1046
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 204/536 (38%), Positives = 315/536 (58%), Gaps = 21/536 (3%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V +D L+N +R HQR GVKFM+EC++G+R D GCI+AD MGLGKTLQ I L+WTL+R
Sbjct: 304 VYIDVYLNNSMRIHQRLGVKFMFECISGLRGPDIGGCILADSMGLGKTLQTIALIWTLIR 363
Query: 197 QGPLA--KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQ 254
+ P + PLI K ++VAP SL+ +W E+ KWLG I G + + F
Sbjct: 364 RNPHSGTSPLIRKVVVVAPVSLLGSWNKEVKKWLGDARLIPKIALGKRETVIRICKEFAS 423
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
+ + +L+ISYE FR H L N L++ DEGHRLKN +T+++ +K RR
Sbjct: 424 SSAK-----MLLISYEQFRMHVETLS-NACDLLIFDEGHRLKNMNIKTFRSFNSIKCNRR 477
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++L+GTP+QN L E++S V FVN I ++F+ + PIL S AS KA R
Sbjct: 478 IILTGTPLQNSLDEFYSCVKFVNPNIFENEKQFKFVFSDPILAALKSDASADAVEKAAVR 537
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
++L I++R ++RR + +L K LP ++E + +K+T Q LY +I++ + + G
Sbjct: 538 SKELTHIISRFVLRRKADILEKLLPPRSEYFIFLKLTPFQNMLYKKMIQARYNKSELDTG 597
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
E A +T ++KL NHP L+ + G + P Y +
Sbjct: 598 EG------AFGLLTIMRKLLNHPQLIYTDV--GNQTSQEFKQYFPQDYQLDDWEASFKFK 649
Query: 495 LSAKLMVLDTMLAV-IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ L LD M + I + ++I++VS +TQTLD+ + + K + K+VRLDGS+ +KR
Sbjct: 650 FISDL--LDQMRQIEIAQKSTERIIIVSYWTQTLDVLQIMIKQKNLKFVRLDGSVNAQKR 707
Query: 554 AKVVETFNKTSNEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
++++ F +N+ +F+L AGG GLNL ANR+V+ + +WNP+ND Q M R+WRDGQ
Sbjct: 708 QELIDRFQDPTNDIKVFLLCGSAGGTGLNLSAANRMVLMEANWNPSNDLQVMGRIWRDGQ 767
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
KP +YR ++ G++EEK++QRQ K+ LS VVD E+ + + ++ +L+ LF+ +
Sbjct: 768 TKPVHIYRLVACGTMEEKVLQRQFLKEDLSQNVVD-EKMIVKQYNNDKLKQLFEFK 822
>gi|302801027|ref|XP_002982270.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii]
gi|300149862|gb|EFJ16515.1| hypothetical protein SELMODRAFT_421707 [Selaginella moellendorffii]
Length = 825
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 249/690 (36%), Positives = 369/690 (53%), Gaps = 99/690 (14%)
Query: 43 VDNEDEPNSKLPMTKEEMSEHE-----NLIRQILAKPFKVPILNYTGGG-YST-KALGVR 95
+DN + SK ++ +E+ E+ N + ++L + +P Y G +ST +
Sbjct: 118 LDNNGKSISKRKISGKEIKENSSLEVFNFVIEVLDE---IPEEEYLSGKIFSTSRPTFPS 174
Query: 96 REGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ---VHVVVDPVLSNILRPHQR 152
EG+ + P L P Q+ D L ++ ++ VVVDP +++ LRPHQR
Sbjct: 175 SEGSDITVESARNPGRERLSRPMQILEKDQLVLNMAEVANGAAPVVVDPYIASKLRPHQR 234
Query: 153 EGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVA 212
EGVKFMYECV G+R GC++ADEMGLGKT+Q I L+WTLLRQG P + +A +V
Sbjct: 235 EGVKFMYECVMGLRSRTFTGCLLADEMGLGKTVQVIALIWTLLRQGSGGVPAVRRAAVVC 294
Query: 213 PSSLVKNWCNEITKWLGG-RVAALPIDGGSKAE---IDNKLNSFMQTYGRRPVNPILVIS 268
P +L +NW E+ KWLG R+ A+ +D +A ID K +SF P+L+ S
Sbjct: 295 PLTLTRNWGKEVRKWLGSERLKAMVVDCAREAAEKIIDFKNDSFC---------PLLITS 345
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCE--------SQTYQALMGLKAKRRVLL--- 317
YE R H ++ + L++CDE HRLK+CE ++T +L L +R+LL
Sbjct: 346 YEILRKHKDIVASTNLELLICDEAHRLKSCENNQWLSKGNKTIASLASLNCNKRILLVRF 405
Query: 318 --------------SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
+GTP QN+L E+++L+ F N +LG+ E++ Y +PI + +D A
Sbjct: 406 CSLHGFLTPGSDWQTGTPAQNNLSEFYALLDFANPELLGSYNEYKNIYASPIEQSRDRNA 465
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S AE+ +ER E+L + + C++RRTS + ++LP K+E V K+ D+Q LY +K
Sbjct: 466 SHAEKELGSERSEELKQMTSFCILRRTSEINKEHLPPKSEYAVFCKLHDVQISLYEIFVK 525
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ--TGAD-----GFENAMN 476
S V RTM + + + LS+I +L+KL +HP L+ ++ T A+ F A
Sbjct: 526 SQFV-RTMLNSDIQRAHV--LSAIGALRKLSSHPGLLQSDMKHVTSAEIKNQPFFHRAEE 582
Query: 477 ILP-TGYAASYKS-GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLS 534
+L + AS + + LS K + L +L + + +D+IV+ SN+TQTLDL E +
Sbjct: 583 LLDLSDVQASLRDVVRHNWSLSGKFVCLQHLL-LATIQCNDRIVVASNFTQTLDLIEAMC 641
Query: 535 KLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
+K+VRLDG I +R +VE RLV+ DPD
Sbjct: 642 NEHSWKFVRLDGGTMISERQPLVE----------------------------RLVLVDPD 673
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD------- 647
WNPAND Q M+R+WR+GQ KP +YR LSTGSIEEK+ QRQ KK L+S D
Sbjct: 674 WNPANDAQVMSRIWREGQPKPVKIYRLLSTGSIEEKIYQRQIMKKDLTSFFGDQSTYQPT 733
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHD 677
C+ + FS ELR L +L T +T+D
Sbjct: 734 CKRTNDQKFSRQELRELLKLPSETKCETYD 763
>gi|145350886|ref|XP_001419826.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580058|gb|ABO98119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 821
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 241/632 (38%), Positives = 333/632 (52%), Gaps = 66/632 (10%)
Query: 73 KPFKVPILNYTGG-GYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKD 131
K F P+ G G +T + + LH A ALVL T D + D
Sbjct: 171 KSFVAPVRGIGGAVGSATTSEAKKTFAPEAPLHSDVADGALVLSTLDT----DFHRRDY- 225
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE-----DAYGCIMADEMGLGKTLQ 186
+ VV DP +S LRPHQR+GV+FMYE V G+R GC++A EMGLGKTLQ
Sbjct: 226 RTACAVVCDPFISRFLRPHQRDGVQFMYEAVMGLRTSVHTNRAHTGCLLAHEMGLGKTLQ 285
Query: 187 CITLMWTLLRQGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKA 243
I L+WTLL+Q P +P + ++ P+SL NW E KWLG R ++GG K
Sbjct: 286 VIALVWTLLKQSPFKRGQPTCRRVVVCVPASLTGNWALEFRKWLGEERCDPKVVEGGDK- 344
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT- 302
E F RR +L+ SYET R+ A V+ + V L++CDE HRLKN T
Sbjct: 345 EARKSFEEFALPSQRR--YNVLITSYETLRAQADVVARANVDLLVCDEAHRLKNATQSTK 402
Query: 303 -YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
QAL LK RRVLL+GTPIQN+L E + ++ F G+LG FRK Y PI + +
Sbjct: 403 GAQALASLKCHRRVLLTGTPIQNNLDELWGVMDFAAPGLLGDLDSFRKIYSGPIEKASER 462
Query: 362 CASDAERTKANERLEQLIGIVNRCL-IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
A + N R E++ ++ + R+ + + LP KTE VV ++++++QK LY +
Sbjct: 463 GAKEEVVRIGNARREEVGRLIGPFIHSRKADEINASLLPPKTEYVVFVRLSEVQKGLYVD 522
Query: 421 LIKSDAVRRTMK--GGENTKLGMTALSSITSLKKLCNHPDL---VMDKIQTGADGFENAM 475
+K ++ + G ++ L +I +L+KLCN L V D + +
Sbjct: 523 QLKQKSMLSMLGRIGKTQDAESISPLQAIQTLQKLCNAAALATEVSDPVAS--------- 573
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
S+KL VL M + D++IV+VS +T TLDL +L +
Sbjct: 574 --------------------SSKLAVLRAMFRA--LANDERIVVVSGFTTTLDLIAKLCE 611
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
KY RL GS K+R +V TFN + I +LS+KAGG GLNL+GANRLV+ D W
Sbjct: 612 SEHLKYDRLQGSTPPKERTSIVRTFNNSGK--ILLLSTKAGGVGLNLVGANRLVLVDSSW 669
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV--------VD 647
NPA+D QA ARVWR+GQ KPC +YR LSTG+IEE+M QRQ K AL+ + +
Sbjct: 670 NPAHDLQAQARVWREGQTKPCSIYRLLSTGTIEERMFQRQELKGALARTLGFKSTSGNNN 729
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKI 679
+ F+ +ELR LF ++T DT D+I
Sbjct: 730 SAGSSSSTFTQAELRDLFSYVKDTRCDTADRI 761
>gi|254567481|ref|XP_002490851.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|238030647|emb|CAY68571.1| DNA-dependent ATPase [Komagataella pastoris GS115]
gi|328351234|emb|CCA37634.1| DNA repair and recombination protein RAD54B [Komagataella pastoris
CBS 7435]
Length = 840
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 232/587 (39%), Positives = 352/587 (59%), Gaps = 53/587 (9%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
VVVDP+LS LRPHQREGVKF+Y C+ G + GCI+ADEMGLGKTL ITL+WTLL+
Sbjct: 201 VVVDPLLSQHLRPHQREGVKFLYNCLDGSKELPHKGCILADEMGLGKTLTTITLIWTLLK 260
Query: 197 QGPL--AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
Q + +P + K ++V P +L+ NW E KWLG RV+ L + S E D + +
Sbjct: 261 QNQVDHKRPAVKKVLVVCPVTLIHNWKREFRKWLGMNRVSILEMSSASNVEEDKR---SV 317
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
+GR V IL++ YE + + + + V L++CDEGHRLKN ++ ++L + R
Sbjct: 318 INFGRTRVYQILILGYEKLQKLTNEISQINVDLLVCDEGHRLKNSNNKVMKSLTSFQIPR 377
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD-SCASDAERTKAN 372
+++L+GTPIQNDL E++++++FV GI+G F + Y PIL+ ++ +C + N
Sbjct: 378 KIILTGTPIQNDLNEFYNIINFVQPGIVGDFASFNRDYMRPILQAREINCLNRKIIKAGN 437
Query: 373 ERLEQLIGIVNRCLIRRTSA-LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
E+ L+ + + ++RR + + + +LP KTE ++ + MT+LQ+ELY ++I+++ + +
Sbjct: 438 EKSNSLVELTQKFILRRKAKDINTNFLPPKTELILMVPMTELQQELYKDIIETNQAKLGL 497
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
N L I L+K+CN P L+ D+ N N SGK+
Sbjct: 498 INDRNF-----FLQKILILRKICNSPSLLKDEPDFARYNLGNRFN-----------SGKI 541
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
KL VL +L + TT++K V+VSN+T+TLD+ + + + +KY RLDGS K
Sbjct: 542 ------KLTVL--LLRKLFETTNEKCVIVSNFTKTLDVLQLIIEHNNWKYHRLDGSS--K 591
Query: 552 KRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
R K+V FN++ + FI +LSSKAGG GLNLIGA+RL++FD DWNP+ D QAMARV R
Sbjct: 592 GRDKIVRDFNESPQKDRFIMLLSSKAGGVGLNLIGASRLILFDNDWNPSVDIQAMARVHR 651
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD----CEEDVARHFSMSELRSLF 665
DGQK+ F+YR + G+I+EK++QRQ K+ LS +D ++DV F+ +L+ LF
Sbjct: 652 DGQKRHTFIYRLYTKGTIDEKILQRQLMKQNLSDKFLDDNDSSKDDV---FNDYDLKDLF 708
Query: 666 QLEENTISDTHDKIKC---------SRCVNGIQVKPPPLES-DCTDD 702
++ +T THD ++C + + + K PLE+ D TDD
Sbjct: 709 TVDLDTNCSTHDLMECLCNGRLRDPTPVLEAEECKTKPLEAVDDTDD 755
>gi|339250730|ref|XP_003374350.1| DNA repair protein Rhp54 [Trichinella spiralis]
gi|316969354|gb|EFV53467.1| DNA repair protein Rhp54 [Trichinella spiralis]
Length = 328
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 184/331 (55%), Positives = 235/331 (70%), Gaps = 7/331 (2%)
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
+Q +LY + S + ++ + AL+ IT+LKKLCNHP L+ +K DGFE
Sbjct: 1 MQMKLYERFLNSKTMASQLRDACTGNMPSKALALITNLKKLCNHPALIYEKCIEKTDGFE 60
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
N ++ P G++ ++ E S K+ VLD +LA +K TDDK+VLVSNYTQTLDLFE+
Sbjct: 61 NCSDLFPPGFSVK---KQIRPEWSGKMRVLDGLLAYVKANTDDKVVLVSNYTQTLDLFEQ 117
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNK---TSNEFIFMLSSKAGGCGLNLIGANRLV 589
L LR Y +VRLDGSMT KKRAK+V FN ++ F+FMLSSKAGGCGLNLIGANRLV
Sbjct: 118 LCILRNYGFVRLDGSMTKKKRAKIVADFNDPQVGNSTFVFMLSSKAGGCGLNLIGANRLV 177
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND QAMARVWRDGQKK CF+YR L+TGSIEEK+ QRQ HKKALSSCVVD E
Sbjct: 178 MFDPDWNPANDGQAMARVWRDGQKKICFIYRLLATGSIEEKIFQRQTHKKALSSCVVDNE 237
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E++A FS +L+ LF+++ +TISDTHD +KC RC+ G++ PP ++D DL+ WHH
Sbjct: 238 ENLASLFSSDQLKDLFRMKSDTISDTHDSLKCKRCIGGVESISPPEDADTNSDLALWHHS 297
Query: 710 TEKRWLVDPILKHCWGAGV-SFVFYQHSTKA 739
+KR + D +K W +G+ +F FYQ S A
Sbjct: 298 KDKRRIPDNAIKAIWESGLMTFCFYQKSHDA 328
>gi|385302190|gb|EIF46334.1| dna-dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 547
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 222/556 (39%), Positives = 333/556 (59%), Gaps = 39/556 (7%)
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLA--KPLI-DKAIIVAPSSLVKNWCNEITKWLGG 230
+ADEMGLGKTLQ I+L+WTLL+Q P KP+I +K +I P +LV NW E KWLG
Sbjct: 4 FLADEMGLGKTLQTISLIWTLLKQTPYVGQKPIISNKVLICCPVTLVANWKKEFHKWLGR 63
Query: 231 RV---AALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
+ + L +DG ++ K + + V +L++ YE +S L + + L+
Sbjct: 64 KPNSPSVLALDGAQQS-FRQKDRQIVHGFSNTKVYKVLIVGYEKMQSLEKELAEAKFDLL 122
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDEGHRLKN S++++AL L +RR++L+GTPIQNDL E+++L+ FVN G+LG+ +EF
Sbjct: 123 VCDEGHRLKNSLSKSFKALQRLDIRRRIILTGTPIQNDLTEFYNLISFVNPGVLGSFKEF 182
Query: 348 RKQYETPILRGQDS-CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
+K++ PILR +++ C S A + +R E L+ + ++RRT+A L KYLP +++ V+
Sbjct: 183 QKKFIRPILRSRETGCRSKAVISLGKQRTETLVQETKKFILRRTNAELVKYLPKRSDYVL 242
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMK-------GGENTKLGMT--ALSSITSLKKLCNHP 457
+ + LQ EL+ L K+ + M+ G K +T +LS +T+ +K+CN P
Sbjct: 243 FVPPSRLQLELFRLLAKTKKYTKIMEEEEELQSAGSRAKPSVTKDSLSLMTTFRKICNSP 302
Query: 458 -----DLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
D + +I A G + KSGK I L KL+ L + + T
Sbjct: 303 SLLEEDXLFREICDDASG-SGPGSAFAEQLGKKVKSGK--INLLMKLLAL-----IYRNT 354
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE--FIFM 570
D+K+++VSN+TQ LD+ E+ + Y RLDGS K R+K+V++FNK++ E F+F+
Sbjct: 355 QDEKVIVVSNFTQVLDVIEKTIQSLRLSYSRLDGSTPSKDRSKLVDSFNKSTKEACFVFL 414
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGG GLNL+GA+RL++FD DWNP+ D QAMAR+ R+GQK+ +YR L++G I+EK
Sbjct: 415 LSSKAGGMGLNLVGASRLILFDNDWNPSVDLQAMARIHREGQKRHVRIYRLLTSGCIDEK 474
Query: 631 MMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
+ QRQ K+ LS V D A FS S+JR +F + E+ THD + C +G+
Sbjct: 475 IFQRQLIKRNLSDRFVDDSASSDADFFSYSDJRDIFTVSEDCQCGTHDLMXCX--CDGLG 532
Query: 690 VKPPPLESDCTDDLSC 705
K E DCT D C
Sbjct: 533 TK----ELDCTQDDEC 544
>gi|308808065|ref|XP_003081343.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS)
[Ostreococcus tauri]
gi|116059805|emb|CAL55512.1| RA54B_CHICK DNA repair and recombination protein RAD54B (ISS)
[Ostreococcus tauri]
Length = 792
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 231/595 (38%), Positives = 325/595 (54%), Gaps = 54/595 (9%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECV 162
LH A NALVL T + + D + VV DP ++ LRPHQR+G+KFM+ECV
Sbjct: 166 LHSDVAENALVLST----RETNFYRRDV-RTACPVVCDPFIAKFLRPHQRDGLKFMFECV 220
Query: 163 TGVRI-----EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSS 215
G+R + GC++A EMGLGKTLQ I L+WTLL+Q P + P + +I P+S
Sbjct: 221 MGLRASAHTNKAHTGCLLAHEMGLGKTLQVIALVWTLLKQSPFKRGCPTCRRVVICVPAS 280
Query: 216 LVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS 274
LV NW E KWLG R+ ++GG K + F + RR +L+ SYET +
Sbjct: 281 LVGNWAAEFKKWLGPERIDPKVVEGGDK-DAQKSFEEFALSSQRR--YNVLITSYETLTA 337
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQT--YQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
+ L + + L++CDE HRLKN T AL LK RRVLL+GTP+QNDL E + +
Sbjct: 338 KSEALARANIDLLVCDEAHRLKNASQTTKGAMALSSLKCHRRVLLTGTPVQNDLDELWGV 397
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL-IRRTS 391
+ F G++G F+ Y TPI + + A + N R +++ ++ + R+
Sbjct: 398 MDFACPGLMGDLSSFKTIYATPIEKAGERGAKEDVVRIGNARRDEVSKLIGPFIHSRKAD 457
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLK 451
+ + LP KTE VV I++T+ Q+ LY +K+ +++ + T ++ LS+I +L+
Sbjct: 458 EINASLLPPKTEYVVFIRLTETQRALYVEQLKAKSMQAMLGRIGKTDDAISPLSAIQTLQ 517
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
KLCN L AS IE S+KL VL +M +
Sbjct: 518 KLCNAAAL------------------------ASEAHRDDPIETSSKLCVLRSMFRA--L 551
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
+D++IV+VS +T TLDL L + KY RL GS K R +V FN T I +L
Sbjct: 552 PSDERIVIVSGFTTTLDLIALLCEGEKLKYDRLQGSTPPKDRTAIVRKFNTTGR--ILLL 609
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+KAGG GLNL+GANRLV+ D WNPA+D QA AR+WR+GQ K C +YR LSTG+IEE+M
Sbjct: 610 STKAGGVGLNLVGANRLVLVDSSWNPAHDLQAQARIWREGQTKKCTIYRLLSTGTIEERM 669
Query: 632 MQRQAHKKAL-------SSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKI 679
QRQ K +L S+ + F+ +ELR LF L ++T DT D+I
Sbjct: 670 FQRQELKGSLARTLGFKSTSTASNGGGSSSTFTQAELRDLFSLVKDTKCDTADRI 724
>gi|213402947|ref|XP_002172246.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus
yFS275]
gi|212000293|gb|EEB05953.1| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces japonicus
yFS275]
Length = 749
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 224/570 (39%), Positives = 333/570 (58%), Gaps = 49/570 (8%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
A HDP AP+ALV+ ++ D ++ V VV+DP L+ IL+PHQ+EGV F+Y C
Sbjct: 98 ARHDPNAPDALVM---ERMQPWDEMR------NVDVVIDPRLAKILQPHQKEGVSFLYNC 148
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKN 219
+ + ++YG I+ADEMGLGKTLQ IT++WTLL+Q P+A P + K +IV+P +L++N
Sbjct: 149 LMSIGRHNSYGAILADEMGLGKTLQTITVLWTLLKQNPIANAAPPLKKIMIVSPVTLLQN 208
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH-ASV 278
W NE KWLG + I +K+ ++ F + G + +LV YE RS
Sbjct: 209 WKNEFIKWLGTERIHVMI---AKSTVE-----FKEFIGNVSYSVVLV-GYEKVRSFLQDN 259
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ +++ LV+CDEGHRLK+ SQT AL LK KRR+LL+GTPIQNDL+E++++V+F+
Sbjct: 260 IDCDKIDLVVCDEGHRLKSMNSQTGIALQKLKTKRRLLLTGTPIQNDLMEFYAMVNFIMP 319
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LG+ FR QYE PILR + AS N RLE+L + ++RR +LS+ L
Sbjct: 320 GVLGSQTSFRSQYELPILRSRLVNASTKNVLLGNARLERLARYASTFVLRRKIDVLSETL 379
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPD 458
P +T+ + +K + Q+ LY + RT+ EN K LS++T L LCN
Sbjct: 380 PPRTDVTIFLKPSRSQELLYEEHLDKFWKDRTL---ENEK--TFPLSTLTELNCLCNSTR 434
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ + T S LI S+K L ++L K + K V
Sbjct: 435 LIQHQENTDL-------------------SLNDLIASSSKFEFLKSLLLEFK-NSQLKCV 474
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEF--IFMLSSKAG 576
+VS +T+TL+L E L K + RLDGS R +V+ FN ++ E +F+LS+K+G
Sbjct: 475 IVSQFTETLNLIEILLKHLLITHCRLDGSTPTNTRQSLVDQFNCSTYEHLSVFLLSNKSG 534
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GLNL+GANRL++F+P WNPA D QA+ R++R GQ + +Y LSTG ++E++ RQ
Sbjct: 535 GAGLNLVGANRLILFEPSWNPAYDLQALGRIYRYGQNRSVLIYTLLSTGMLDEQIYIRQH 594
Query: 637 HKKALSSCVVDCEEDVARH-FSMSELRSLF 665
K LS+ +D + ++ F M ++++LF
Sbjct: 595 TKTGLSNAFMDSDTSTLKYKFQMKDMKNLF 624
>gi|301629662|ref|XP_002943956.1| PREDICTED: DNA repair and recombination protein RAD54-like [Xenopus
(Silurana) tropicalis]
Length = 359
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 201/335 (60%), Positives = 238/335 (71%), Gaps = 21/335 (6%)
Query: 1 RRSLAPSQLSKR----SPEDSPGIKTFPPPVKK--------EKRSCTSRKPLGSVDNEDE 48
RRSLAPSQL+KR S ED + P K+ E RKPL + N
Sbjct: 2 RRSLAPSQLAKRKQGSSSEDEEWCEDAVPKRKRLSSNKDIRENWISPFRKPLAQLTNRP- 60
Query: 49 PNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTA 108
T + +HE IR IL+KPFK+PI NY GG +ALG+++ G R+ALHDP
Sbjct: 61 -------TCLDSKQHEAFIRSILSKPFKIPIPNYQGG-LGLRALGIKKAGIRRALHDPFE 112
Query: 109 PNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIE 168
ALVLY PPQLSAHDLLK+DK+K+ VHVVVDPVL +LRPHQREGVKF++ECVTG RI
Sbjct: 113 EGALVLYEPPQLSAHDLLKVDKEKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIS 172
Query: 169 DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL 228
++G IMADEMGLGKTLQCITL+WTLLRQ P AKP I+KA++V PSSLVKNW NE++KWL
Sbjct: 173 GSHGSIMADEMGLGKTLQCITLIWTLLRQSPDAKPEIEKAVVVCPSSLVKNWYNEVSKWL 232
Query: 229 GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVL 288
GGR+ L IDGGSK EID KL+ FM +G R + IL+ISYETFR HA VLH+ VGLV+
Sbjct: 233 GGRIQPLAIDGGSKEEIDKKLSGFMNQHGMRVPSAILIISYETFRLHAEVLHRGSVGLVI 292
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
CDEGHRLKN E+QTYQAL L RRVL+SG P +
Sbjct: 293 CDEGHRLKNSENQTYQALNSLNTVRRVLISGHPFR 327
>gi|344228983|gb|EGV60869.1| hypothetical protein CANTEDRAFT_137339 [Candida tenuis ATCC 10573]
Length = 878
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 214/574 (37%), Positives = 331/574 (57%), Gaps = 38/574 (6%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V++DP+LS +LRPHQ+EGV FMY V G A G ++AD+MGLGKTL ITL+WTL++
Sbjct: 200 VIIDPILSKVLRPHQKEGVSFMYNGVMGYSF-GANGVLLADDMGLGKTLMSITLIWTLIK 258
Query: 197 Q--GPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
Q P K +K +I+ P +L+ NW E KWL ++ L +D S + +
Sbjct: 259 QSPNPEKKNEANKVLIMCPVTLINNWRREFKKWLNINQIGILVVDNNSTNYKQD-----L 313
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
+ + + ++++SYE + + + L++CDEGH+LKN +++ + L + +
Sbjct: 314 RNFSKSSAYQVMIMSYERLLNCEEEMLDIKFDLLVCDEGHKLKNNTNKSLKILTNMDVSK 373
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
+VLLSGTPIQN+L E+++L++F+N G GT F+K++ PI ++ + E K +
Sbjct: 374 KVLLSGTPIQNNLTEFYTLINFINPGAFGTFTSFQKKFIKPIEMSREVNCYNKEVIKMGK 433
Query: 374 RL-EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
++L I ++RRT+ +L KYL KT+ ++ +K + Q EL+ +LI S+
Sbjct: 434 TASKELSSITKTFVLRRTNDILFKYLSSKTDVLLFVKPSHQQLELF-DLIMSNCSFADYD 492
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
L+ I KK+CN P L+ D +N N L GY +
Sbjct: 493 N-------NNVLNLINVFKKICNSPSLLQD---------DNLFNSLSGGYKTELSTS--- 533
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
S K+ +L ML I +K+V+VSNYT+TLDL E++ K ++++RLDGS
Sbjct: 534 ---SGKIDLLIMMLIEIINEKKEKLVIVSNYTKTLDLLEKVLKKLNFEFLRLDGSTNPST 590
Query: 553 RAKVVETFNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
R ++ FN S IF+LSSK+GG G+NLIGA+RL++FD DWNP+ND QAM+R++RD
Sbjct: 591 RTSIINQFNNVSFPRYPIFLLSSKSGGFGINLIGASRLILFDNDWNPSNDLQAMSRIYRD 650
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQ KP F+YRF +TG ++EK+ QRQ K LS ++ + + F M++L+ LF + E
Sbjct: 651 GQLKPVFIYRFFTTGCLDEKIFQRQLMKNNLSDKFLNDSKANSNVFDMNDLKDLFTVHEY 710
Query: 671 TISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLS 704
T +THD ++C C G Q LE + +D L+
Sbjct: 711 TNCNTHDLLECD-C--GGQGDTQQLEPEVSDILT 741
>gi|47225441|emb|CAG11924.1| unnamed protein product [Tetraodon nigroviridis]
Length = 908
Score = 364 bits (935), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 214/543 (39%), Positives = 302/543 (55%), Gaps = 56/543 (10%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDPTAP ALV+ P S H V VV+DP L+ LRPHQREG+ F+YE
Sbjct: 142 KPRHDPTAPGALVMPRPS--STHQWSNNKSGLPVVDVVMDPHLNVHLRPHQREGLVFLYE 199
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R +G I+ADEMGLGKTLQ + L WTLL+QGP +P++ + ++V P SLV+N
Sbjct: 200 CVMGMRSAGCHGAILADEMGLGKTLQSVALSWTLLKQGPYGGRPVVKRVLVVTPGSLVQN 259
Query: 220 WCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSF------------MQTYGRRPVNPILV 266
W E KWLG R+ +D A + +SF M+ + P++ +LV
Sbjct: 260 WGKEFNKWLGRERIQVFTVDQVRPAGGEGVRSSFLIRRVGCLQDHRMEHFVSSPLHSVLV 319
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
ISYE + K + GL++CDEGHRLKN +T AL L RRV+L+GTP+QNDL
Sbjct: 320 ISYEMLLRCLEQVQKVDFGLIVCDEGHRLKNSSIKTSSALNSLSCSRRVILTGTPVQNDL 379
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E+++++ FVN GILG++ +R+ YE PILR + ++ ER ER +L +
Sbjct: 380 QEFYAIIEFVNPGILGSSTAYRRVYEEPILRSRQPSCAEEERVLGEERAAELSRLTGTFT 439
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RRT ++++YLP + + + + LQ +Y L+ ++ G T L+
Sbjct: 440 LRRTQEIINRYLPPRLDWTLFCAPSPLQLHVYQRLLCHRVFTSCLQAGAQAH---THLAC 496
Query: 447 ITSLKKLCNHPDLVMDKIQ-------------------------TGADGFENAMNILPTG 481
IT+LKKLCNHP L+ +Q TG + + L
Sbjct: 497 ITALKKLCNHPALLYSAVQYPSSPTPAEVVRADRAGVCLRREEPTGGSEEPSFYDGLAEL 556
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
SY SG+L S KL+VL +L I+ ++ D++V+VSNYT+TLDL
Sbjct: 557 SPESYSSGELSTADSGKLLVLSELLGAIRQLSPSDRVVVVSNYTKTLDL----------L 606
Query: 541 YVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
LDG M +R ++V++FN S F+F+LSSKAGG GLNL+GA+ LV++D DWNPAN
Sbjct: 607 QDLLDGHMPTGQRQRLVDSFNSPFSQNFLFLLSSKAGGLGLNLVGASHLVLYDIDWNPAN 666
Query: 600 DDQ 602
D Q
Sbjct: 667 DIQ 669
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH--FSMSELRSLFQLEENTISDTHDK 678
+ G+IEE++ QRQ K+ LS VVD + A H FS +ELR LF L +T THD
Sbjct: 776 WFPAGTIEERVFQRQVSKQGLSGTVVDLGK-AAEHTSFSTNELRDLFSL-TDTPCLTHDL 833
Query: 679 IKCSRCVNGIQVK 691
+ CS ++G V+
Sbjct: 834 LGCSCSMDGSVVE 846
>gi|389741791|gb|EIM82979.1| hypothetical protein STEHIDRAFT_133763 [Stereum hirsutum FP-91666
SS1]
Length = 1102
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 224/619 (36%), Positives = 331/619 (53%), Gaps = 66/619 (10%)
Query: 103 LHDPTAPNALVLYTPPQLSAHDLLKIDK-----DKIQVHVVVDPVLSNILRPHQREGVKF 157
LHDP A A+V+ P + + K +K + V VV+DPVL+ LRPHQ EGVKF
Sbjct: 322 LHDPDAEGAVVMKAP---TEEHMTKYNKKYSLPNSPVVPVVIDPVLARRLRPHQVEGVKF 378
Query: 158 MYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL----LRQGPLAK--PLIDKAIIV 211
MYE V G+R + GCI+ADEM T+ W L L Q P P++ K +IV
Sbjct: 379 MYESVMGLRKHEGNGCILADEM--------FTIRWPLTSTPLEQNPYIDRGPVVGKVLIV 430
Query: 212 APSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYET 271
P +L+ NW NE KWLG + + K+ I +NS ++ +L++ YE
Sbjct: 431 CPVTLINNWKNEFHKWLGRDRVGIFVGDKDKSAIKQFINS--------KIHHVLIVGYER 482
Query: 272 FRS--HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
RS +A +L +GL++ DEGHRLK+ +++T + LK RRV+LSGTP+QN L EY
Sbjct: 483 LRSVMYAPILPP--IGLIIADEGHRLKSADNKTSKMFEALKTPRRVILSGTPVQNSLREY 540
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
F++ F N G+L FR+ YETPILR + + E+ R QL I ++RR
Sbjct: 541 FAMADFCNPGLLDDYNTFRRVYETPILRSRTPGCTKKEQELGEARSAQLQAISRSFVLRR 600
Query: 390 TSALLSKYLPVK--------------------TEQVVCIKMTDLQKELYTNLIKSDAVRR 429
+ +L YLP K E +V + T LQ +++ ++ D +
Sbjct: 601 EAGILKNYLPPKRKYCIYERRQPRLRHSAILLDEYIVFVTPTLLQLSIFSKILNPDKLDN 660
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS---- 485
++ L + I L K+ N P L+ + NI T
Sbjct: 661 IIQSSTAESLAL-----INMLTKISNSPILLKAVADKAKAKAKGEGNIAKTSAVEEAVKL 715
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
+G + ++S +TML TD+K ++VS+YT TL++ E K + Y ++RLD
Sbjct: 716 LPNGAQVHDVSLSGNFDNTMLNDPPQRTDEKCIVVSHYTSTLNILEEFCKKKSYTFLRLD 775
Query: 546 GSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
G KR ++V TFNK+S E F+F+LSSKAGG GLNLIGA+RL + D DWNP++D Q+
Sbjct: 776 GQTPAGKRQELVNTFNKSSQERCFMFLLSSKAGGVGLNLIGASRLCLIDSDWNPSHDLQS 835
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE-EDVARHFSMSELR 662
MAR+ RDGQ++ F+YRF++ G+I+EK+ QRQ K LS+ + + + E + F+ ELR
Sbjct: 836 MARIHRDGQRREVFIYRFMTAGTIDEKIFQRQTTKLGLSTLIGNTKSESKSDSFTPKELR 895
Query: 663 SLFQLEENTISDTHDKIKC 681
+F + +T TH+ + C
Sbjct: 896 DIFTIHPHTSCHTHELLDC 914
>gi|323450080|gb|EGB05963.1| hypothetical protein AURANDRAFT_1051, partial [Aureococcus
anophagefferens]
Length = 531
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 217/559 (38%), Positives = 315/559 (56%), Gaps = 42/559 (7%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY-----GCIMADEMGLGKTLQCITLM 191
VVV P+L+ LRPHQREGV+F+Y+CV G+R E A+ G I+AD+MGLGKTLQ + L+
Sbjct: 1 VVVPPLLAQFLRPHQREGVQFLYDCVAGLR-EYAHDYSGQGAILADDMGLGKTLQTVALV 59
Query: 192 WTLLRQGPLAKPLIDKAIIVA-PSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
+ LL++G + K I+VA P SLV NW E KW+ R A +A +D K+
Sbjct: 60 YALLQRGSVGDGSPVKRIVVACPCSLVPNWKAEFDKWVNARAATKSERVDCRA-VDGKVG 118
Query: 251 SFMQTY--GRRPVNPILVISYETFRSHASVLHKNEVG--LVLCDEGHRLKNCESQTYQAL 306
+ + RP + +L+ISYE+ + H + L + L++CDE RLK ++Q AL
Sbjct: 119 EAIDAFLSPGRPFH-VLLISYESLKLHVAKLSASATACDLLVCDEAQRLKGRKTQLSAAL 177
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L+ RR+LL+GTP+QNDL E+F+L F N G+LGT FRK ++ PI +G A+
Sbjct: 178 GSLRCARRILLTGTPVQNDLDEFFALADFANPGVLGTPDAFRKTFDAPIAKGLLRGAAPG 237
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+ A +R + L I R L+RR + L + +LP K QV+ + Q+ L+
Sbjct: 238 DVKLAQDRQKILSLIAGRFLLRRENKLNAAHLPPKLVQVLVCRPAAPQRRAIAALLGEKR 297
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
++ + G + L+ I KK+C+HP L D G D +++
Sbjct: 298 LQHALAGKQ-----ADVLAYIGRYKKICDHPSLDDD---AGCDARAR--------FSSER 341
Query: 487 KSGKLLIELSAKLMVLDTMLAVIKMTT-DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
KSGKL VL +L ++ +++V+V+N T +L+L RL G+ + LD
Sbjct: 342 KSGKL--------HVLYRLLRELRGNGGQERVVVVANQTSSLELVSRLCSREGWPWCMLD 393
Query: 546 GSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
G +K+R + + FN + E F F+LSS AGGCGLNLIG +RLV+FD WNPA D QA
Sbjct: 394 GKTPLKQRKLLNDEFNDPACEHHFCFLLSSTAGGCGLNLIGGSRLVLFDSSWNPATDKQA 453
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
AR WRDG + C+ YR L+ G+IEEK+ QRQ K+ L +CVV+ V F EL +
Sbjct: 454 AARCWRDGNPRRCYTYRLLTAGTIEEKIYQRQLAKEGL-ACVVEDRAQV-NVFDADELHN 511
Query: 664 LFQLEENTISDTHDKIKCS 682
LF ++ SDTH + C+
Sbjct: 512 LFAFDDAATSDTHACLGCA 530
>gi|63054489|ref|NP_593038.2| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe 972h-]
gi|38258935|sp|Q09772.3|RDH54_SCHPO RecName: Full=Meiotic recombination protein rdh54; AltName:
Full=ATP-dependent helicase rdh54; AltName:
Full=Meiotically up-regulated gene 34 protein; AltName:
Full=RAD54 protein homolog 2
gi|30519798|emb|CAA91068.3| ATP-dependent DNA helicase Rdh54 [Schizosaccharomyces pombe]
gi|31323296|gb|AAP44116.1| meiotic recombination factor Rdh54 [Schizosaccharomyces pombe]
Length = 811
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 218/606 (35%), Positives = 334/606 (55%), Gaps = 52/606 (8%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDPT ALV+ P K + V VV+DP LS L HQREGV F+Y+
Sbjct: 168 KPRHDPTVLGALVMSRP---------KTWDPRTHVDVVIDPFLSKHLYSHQREGVSFLYD 218
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVK 218
C+ G+ + Y I+ADEMGLGKTLQ IT++WTLL+Q A I+ A++VAP +L+K
Sbjct: 219 CLLGMEGKCGYSAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLK 278
Query: 219 NWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYET----FRS 274
NW NE WLG + I ++ Q + I++ YET R+
Sbjct: 279 NWENEFYNWLGHERIHVYIARCAED---------FQEFTSNKTYSIIITGYETVCTYLRN 329
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
+ + ++ L++CDE HRLK+ SQT+ L LK ++R+LL+GTP+QNDL EYFS+V+
Sbjct: 330 YGCGI---DIDLLICDEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVN 386
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
F+ G LGT F+ QYE PILR + AS + + RL++L + +RR + +L
Sbjct: 387 FIIPGSLGTPNSFKAQYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANIL 446
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
+K+LP +T+ V+ IK T Q+ +Y +++ KG L +T L K+C
Sbjct: 447 AKHLPPRTDIVLFIKPTHQQENVYGHVLDGFKSSVDQKG--------YYLKILTRLSKIC 498
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAAS--YKSGKLLIELSAKLMVLDTMLAVIKMT 512
N L+ ++ + N L T ++ +L+ S+KL +L +L +
Sbjct: 499 NSTILLRNEKE----------NFLSTELQDKHVFEQENMLLS-SSKLQILAALLKSFQRG 547
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEF-IFM 570
K V+VS Y +TL+L E + ++ +L GS +R +V FN +S EF + +
Sbjct: 548 C-QKAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLL 606
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCGLNL G+ RL++++P WNPA D QA++R++R GQK+P +Y FLS+G ++E+
Sbjct: 607 LSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDER 666
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSE-LRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
+ RQ K+ LSS +D + ++F E +++LF + T++ S ++ +
Sbjct: 667 IFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSYSKTETCLTYELAFDSDEIDSLT 726
Query: 690 VKPPPL 695
K PL
Sbjct: 727 KKKDPL 732
>gi|339256750|ref|XP_003370251.1| 7 transmembrane receptor [Trichinella spiralis]
gi|316965584|gb|EFV50276.1| 7 transmembrane receptor [Trichinella spiralis]
Length = 2083
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 327/581 (56%), Gaps = 48/581 (8%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIM--------------------- 175
V VD L+ LRPHQREG+ F+Y+C+ G + +G I+
Sbjct: 1461 VPVDISLAKNLRPHQREGILFLYKCIIGYHSTNRHGAILGKKKLFYFSHLIQRVAFFFQT 1520
Query: 176 --ADEMGLGKTLQCITLMWTLLRQGPL-AKPLIDKAIIVAPSSLVKNWCNEITKWLG-GR 231
ADEMGLGK+LQCI L+ TL+++GP + L+ + +++AP SL+ NW E KWL R
Sbjct: 1521 SVADEMGLGKSLQCIALVSTLMKRGPFDGRALLRRILLLAPCSLLDNWKKEFDKWLKLHR 1580
Query: 232 VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN-----EVGL 286
++ + + G +N + + ++SYETF HA+ L ++ +
Sbjct: 1581 LSIVLVRDGKDVNRACSMN-------HASLRSVTIVSYETFARHANRLQESGQSSSRFDM 1633
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
++CDE HRLKN + + +RR+LL+GTP+QN+L E + L N G+LG A +
Sbjct: 1634 LICDEAHRLKNPMVRASYLIRQFPVERRLLLTGTPVQNNLQELYVLCDLANPGLLGEAAQ 1693
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
FR +E PIL + A + ++ + ++L +V+ L+RRT ++ +YLP K E V
Sbjct: 1694 FRASFEKPILASMSAQADEDDQIYGRWKGDELRQLVSTFLLRRTRQIMRRYLPSKVEYAV 1753
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
K + LQ +L+ + + + ++ +T L ++K+C HP ++ + +Q
Sbjct: 1754 FCKPSTLQSKLFETVAEEARLALDQGTAAGSEFCLTFLDY---MRKICAHPAVLYNSLQQ 1810
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIK-MTTDDKIVLVSNYTQ 525
A G N + +L + Y A + + + S KL VL +L +++ +K+V+ SN+T+
Sbjct: 1811 -AVGRPN-VTVLLSCYPACFTDVGVRVGDSGKLTVLAQLLELVRRQYPAEKVVVASNFTE 1868
Query: 526 TLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIG 584
+L++ E G+ RLDGS + R ++V+ FN T+++ F+F+LS+KAGG GLNL
Sbjct: 1869 SLNIIESYCNGMGFSSFRLDGSTDVSSRQRMVDRFNTTTDDTFLFLLSTKAGGMGLNLTA 1928
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANRLV++D DWNPA D QAMAR+WRDGQ++ C +YR L+TGSIEE + QRQ K +
Sbjct: 1929 ANRLVLYDCDWNPAYDRQAMARIWRDGQRRVCHIYRLLTTGSIEENIFQRQIRKDDI-GL 1987
Query: 645 VVDCEEDVAR---HFSMSELRSLFQLEENTISDTHDKIKCS 682
VVD +++ + FS+ EL+ L + NT THD ++C+
Sbjct: 1988 VVDGNDEMKKTKMKFSIDELKHLLVYQANTACATHDAMQCN 2028
>gi|303280531|ref|XP_003059558.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459394|gb|EEH56690.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 553
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 219/564 (38%), Positives = 316/564 (56%), Gaps = 42/564 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K LHDP AP ALV+ T + +A + + VVVDP ++ LRPHQREGV++M+
Sbjct: 8 KPLHDPNAPGALVMCTTEEATAMNA------GPGIAVVVDPFVAKKLRPHQREGVRWMWR 61
Query: 161 CVTGV------RIEDA---YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIV 211
V G R DA GC++AD+MGLGK+LQ + L++T+L QGP P +A++V
Sbjct: 62 VVHGFEPVGDGRRRDADPHLGCLLADDMGLGKSLQSLALIYTMLHQGPRGTPTAKRALLV 121
Query: 212 APSSLVKNWCNEITKWLGGRVA--ALPIDGGS-KAEIDNKLNSFMQTYGRRPVN--PILV 266
P+SLV W E KWLGG A AL GG+ A+ K G+ + PILV
Sbjct: 122 CPASLVGAWGAECAKWLGGVRAQTALAEGGGTDAADAYEKWARGPPPGGKSAFDRWPILV 181
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE--SQTYQALMGLKAKRRVLLSGTPIQN 324
SYET R A V + L++CDE HRL+N + SQT AL + A RRVLL+GTP+QN
Sbjct: 182 TSYETLRRFAPVAAAAKPDLMICDEAHRLRNAQQGSQTLAALRTVDAPRRVLLTGTPVQN 241
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
DL EY +++ F G+LG +F +++ + RG + AS +E +A ++L + ++
Sbjct: 242 DLDEYAAVMDFACPGLLGHMSDFHRKFTAVVRRGGEPDASASEIERAKVAAKELNALTSK 301
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
++RR +++ + +LP KTE +V +T Q+ LY K V GGE T +AL
Sbjct: 302 RVLRREASVNAAHLPAKTEMIVFCSLTPTQRGLYEEGAK---VVGEWVGGEGTA---SAL 355
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNI-LPTGYAASYKSGKLLIELSAKLMVLD 503
+I L++L N V + E + L Y+ G I+ S KL L
Sbjct: 356 CAIGLLRQLANS---VDQALDAADAAAETDLRARLQKNVPPEYEGG---IDGSGKLATLR 409
Query: 504 TML-AVIKMTTD----DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
+L + KM +++V+VS ++ LD + + G RLDG + R+ +V
Sbjct: 410 ALLRELTKMDGSRDGGERVVVVSGFSAALDAAAVVCRDLGLPADRLDGRVPPNARSGLVR 469
Query: 559 TFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
FN+ S + +LS AGG GLNL+GA+RL++FD WNPA+D QAMARVWRDGQ +P +
Sbjct: 470 DFNRGSGGRVMLLSCVAGGAGLNLVGASRLILFDTSWNPAHDRQAMARVWRDGQTRPVTI 529
Query: 619 YRFLSTGSIEEKMMQRQ--AHKKA 640
YR L+ G++EEK+ QRQ HK+A
Sbjct: 530 YRLLAAGTVEEKVFQRQLMKHKEA 553
>gi|302679614|ref|XP_003029489.1| hypothetical protein SCHCODRAFT_111676 [Schizophyllum commune H4-8]
gi|300103179|gb|EFI94586.1| hypothetical protein SCHCODRAFT_111676, partial [Schizophyllum
commune H4-8]
Length = 1059
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 229/619 (36%), Positives = 328/619 (52%), Gaps = 60/619 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPV-LSNILRPHQREGVKFMY 159
K LHDP A A+V+ P + + K +K + V VV L LRPHQ EGVKF+Y
Sbjct: 315 KPLHDPAAEGAIVMKAP---TKDHIKKFNKKGLPVVPVVIDPVLGRRLRPHQVEGVKFLY 371
Query: 160 ECVTGVRIEDAYGCIMADEMGLGKTLQC----ITLMWTL-------------------LR 196
ECV G+R + GCI+ADEMGLGKTLQ I+L+ L LR
Sbjct: 372 ECVMGLRKHEGQGCILADEMGLGKTLQVGCMRISLLLHLTVLCEDDHPRMDAAETKSVLR 431
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQT 255
+D+ + KNW +E KWLG RV D +K L +F+
Sbjct: 432 AHASGTEGLDRMPSIPGEQHTKNWKSEFHKWLGRDRVGVTVCDNSNKG-----LQTFLHG 486
Query: 256 YGRRPVNPILVISYETFRSHASVLHK-----NEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ V L+I YE R+ V++K VGL++CDEGHRLK+ ++T LK
Sbjct: 487 GKHQHV---LIIGYERLRT---VVNKITTCIPPVGLIICDEGHRLKSANNKTTTMFKALK 540
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
RRV+LSGTPIQNDL E+ ++ F N G+L Q FR+ YE PI++ + A+ E
Sbjct: 541 TPRRVILSGTPIQNDLSEFHAMADFCNPGLLDDYQTFRRVYEIPIVKSRTPEATPKELEI 600
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
RL QL+ I N ++RR + LL YLP K E +V +K T LQ +Y ++ D V
Sbjct: 601 GEGRLAQLLTISNSFVLRRDAGLLGNYLPPKHEHIVFVKPTQLQISMYQKILHPDKVDDF 660
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK 490
+ G + L + + +LKK+ N P LV + ++ A +
Sbjct: 661 VNGSQADTLAL-----LNTLKKVSNSPILVKAAHDKDKESSRTSIAKSAVADAVTVLQPD 715
Query: 491 LLIE---LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGS 547
++ LS KL+++ +L I TD+K+V VS+YT +L++ + YKY RLDG+
Sbjct: 716 ARVDDMTLSGKLILVSKLLKYIYEHTDEKVVFVSHYTSSLNILSAYCDRKRYKYNRLDGN 775
Query: 548 MTIKKRAKVVETFNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
KR + V FNK++ + FIF+LS G G+NL GA+RL++FD DWNP+ D Q+ A
Sbjct: 776 TPPAKRQEYVNQFNKSTQRSNFIFLLS----GVGINLTGASRLILFDCDWNPSYDLQSAA 831
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL--SSCVVDCEEDVARHFSMSELRS 663
R RDGQK+P VYRF++ G I+EK+ QRQ K L S + +D + F+ +LR
Sbjct: 832 RCHRDGQKRPVHVYRFMTAGLIDEKIYQRQVTKLGLSSSLMGSESSKDKSDSFTRKDLRD 891
Query: 664 LFQLEENTISDTHDKIKCS 682
+F++ +T +THD + CS
Sbjct: 892 IFRVYADTGCNTHDLLDCS 910
>gi|170577655|ref|XP_001894090.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158599485|gb|EDP37070.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 805
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 218/594 (36%), Positives = 328/594 (55%), Gaps = 61/594 (10%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
D D + VD ++ LRPHQ++GV FMY C+ G ++ADEMGLGKT+Q I
Sbjct: 152 DDDGFVRRIAVDVQIARHLRPHQKDGVAFMYRCLKN----SHGGALLADEMGLGKTVQTI 207
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNK 248
+L+ L+++ KP+I K IIV P+SL+ NW E +W + + ++ K
Sbjct: 208 SLITALVKKRLNQKPIIRKCIIVVPTSLLNNWYAEFMRW-SPQTQTMLFRILKSTDV-KK 265
Query: 249 LNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
L S+ R + I ++SYE A+ L V L++CDE HR+KN + + L
Sbjct: 266 LISY------RNTSMIAIVSYEMIARTAAKLSVVSVDLLVCDEAHRIKNLNGRLREQLQI 319
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L A+RR+LL+GTP+QNDL E++SLV+F + + EF+ E E
Sbjct: 320 LHAQRRLLLTGTPMQNDLEEFYSLVNFARPDLFISFLEFKNLCEM-------------ES 366
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
T+ NE L ++ ++RRT+ ++ LP K + +V + + LQ +Y NL K
Sbjct: 367 TRFNELLSEV-------MLRRTAEVIHDLLPPKIDYIVWCRPSALQCSIYKNLKKF---- 415
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD----KIQTGADGFENAMNILPTGYAA 484
L L+ I +L+KLCNHP L+ K QT N +
Sbjct: 416 ----------LPYDHLTLIDALRKLCNHPFLLYQSMVVKRQTCKVEEREFYNAFLQSFPN 465
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
++ + L S KL V +LA + ++K+V+VSN+TQTLDL E L + Y +RL
Sbjct: 466 TFNAFSLSTTDSGKLNVFVELLATFR-EQEEKVVIVSNFTQTLDLLEELCRTLYYTILRL 524
Query: 545 DGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DGS KKR ++VE FN SN+ + F+LS+KAGG GLNL+GANR+++FD DWNPA D QA
Sbjct: 525 DGSTEAKKRMEIVEEFNSLSNKNYAFLLSAKAGGLGLNLVGANRMILFDSDWNPAVDMQA 584
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
MAR+WR GQ+KPC ++R ++ G+++EK++QRQ K +L++ V + HFS EL+
Sbjct: 585 MARIWRQGQEKPCHIFRLITAGTVDEKILQRQIKKSSLNTIVEMVPVESLTHFSDEELQD 644
Query: 664 LFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESD---CTDDLSCWH----HVT 710
+F L ++ +TH ++C +C +G P LE D +D+ S ++ HVT
Sbjct: 645 VFTLRDDAECETHFLLEC-QC-DGRGFLPEELEVDQEISSDENSAFYPDVEHVT 696
>gi|340502773|gb|EGR29425.1| snf2 family n-terminal domain protein [Ichthyophthirius
multifiliis]
Length = 632
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 199/523 (38%), Positives = 304/523 (58%), Gaps = 35/523 (6%)
Query: 158 MYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA--KPLIDKAIIVAPSS 215
MYEC+TG R + GCI+AD MGLGKTLQ I L+W LLR+ P + KP ++K IIV P S
Sbjct: 1 MYECITGKRGTEISGCILADSMGLGKTLQTIALIWVLLRRNPFSSCKPFLNKVIIVTPVS 60
Query: 216 LVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSH 275
L+ W EI KWLG I G + ++ F +Y + +L+ISY+ FR+H
Sbjct: 61 LLGVWKKEIRKWLGDERLIPKIAIGKREDVITTCKEFAGSYQK-----VLLISYDQFRTH 115
Query: 276 ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHF 335
+ +K L++ DEGH+LKN +T++ ++ KRR++L+GTP+QN L E +S + F
Sbjct: 116 VKIFNK-ICDLLIFDEGHKLKNMNIKTFKQFDLIQCKRRIILTGTPLQNSLNELYSCIKF 174
Query: 336 VNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLS 395
VN I ++F+ + PI+ + AS+ +A R ++L I+ + ++RR + +L
Sbjct: 175 VNPFIFENDKQFKSLFSDPIIASIKTDASEEIIKQAKMRSKELSNIIQKFVLRRKADILE 234
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN 455
K LP K E + +KMT+LQK LY+ V++ EN +T L TS++K+ N
Sbjct: 235 KLLPPKYEFYIFLKMTELQKMLYS------KVQQNYDFNENQTAVLTLL---TSIRKILN 285
Query: 456 HPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIK----- 510
HP ++ Q + FE P + + + S K L +L IK
Sbjct: 286 HPQILYTD-QENKNSFE-FKQYFPHDFQLNDWAN------SVKTQFLKDILYQIKDQQKL 337
Query: 511 MTTDDKIVLVSNYTQTLDLFERL---SKLRGYKYVRLDGSMTIKKRAKVVETF-NKTSNE 566
+KI++VS YTQTLDL ++L + +K +RLDGS+ +R K+++ F ++ SN
Sbjct: 338 KNQKEKIIIVSYYTQTLDLIQQLINQHESEHFKILRLDGSVQSTQRQKLIDQFQDQNSNY 397
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
IF+L +KAGG GLNL ANR+++ + DWNP+ND Q M R+WRDGQ K ++YR TG+
Sbjct: 398 NIFLLCAKAGGTGLNLTAANRMILMEVDWNPSNDLQVMGRIWRDGQTKNVYIYRLFCTGT 457
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
+EEK++QRQ K+ LSS V+D ++ + +H L+ LFQ ++
Sbjct: 458 MEEKILQRQFLKEDLSSNVIDEKQIIQQH-DQDNLKMLFQYDK 499
>gi|255077082|ref|XP_002502193.1| SNF2 super family [Micromonas sp. RCC299]
gi|226517458|gb|ACO63451.1| SNF2 super family [Micromonas sp. RCC299]
Length = 786
Score = 348 bits (893), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 228/637 (35%), Positives = 327/637 (51%), Gaps = 82/637 (12%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K LHDP P ALVL T + A L D V VVVDP ++ LRPHQREGV++MY
Sbjct: 75 KPLHDPNDPGALVLCTAAEAEA---LSGDGSP-GVAVVVDPYIAGKLRPHQREGVRWMYR 130
Query: 161 CVTGVRIEDA--YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVK 218
+ G+ + GC++AD+MGLGK+LQ I L+WT+L+QGP P + ++V P+SLV
Sbjct: 131 VLHGLEPDAGPHTGCLLADDMGLGKSLQSIALVWTMLKQGPRGVPTAKRVLLVCPASLVG 190
Query: 219 NWCNEITKWLGG-RVAALPIDGGS--KAEIDNKLNSFMQTYGRRPVN--PILVISYETFR 273
W E KWLGG R A +GG A+ K Q + P+LV SYET R
Sbjct: 191 AWGAEFNKWLGGVRAQAALAEGGGVDAADAYEKWRRGTQPGTESAFDCWPVLVTSYETLR 250
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCE--SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFS 331
+ + + E L++CDE HRL+N + SQT AL + RRVLL+GTPIQN+L EY +
Sbjct: 251 RLSPIAARAEPDLLICDEAHRLRNAQQGSQTLAALRAVDVPRRVLLTGTPIQNNLDEYAA 310
Query: 332 LVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTS 391
++ F G+LG EF +++ P+ RG + A+ A+ A +L + ++RR +
Sbjct: 311 VMDFACPGLLGPVAEFHRRFTAPVQRGSEPNATSADVAGAQRAANELARLTAGRVLRREA 370
Query: 392 ALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSL 450
++ + +LP KTE VV K T++Q+ +Y K V+ +G + AL +I L
Sbjct: 371 SINAAHLPAKTEMVVFCKPTEMQRAMYEQGAK--IVQGWTEGKAGASTATAAALCAIGLL 428
Query: 451 KKLCNHPDLVMDKIQTGA-----DGFENA------------------------------- 474
++L N D V+ K + GF+N
Sbjct: 429 RQLANSVDQVVKKTSAKSKRGSKGGFDNESPPSKQARIEKEDDNGGLSDGDESDEGEISA 488
Query: 475 --------------MNILPTGYAASYK-SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
+ +P+GY+ K SGKL A L L +A +++V+
Sbjct: 489 GSSTKDADDLRAKLSSSVPSGYSGGVKGSGKL-----ATLRTLLREMASNSSGDGERMVV 543
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCG 579
VS ++ LDL L G RLDG + R+ +V FN + +LS AGG G
Sbjct: 544 VSGFSAALDLAAGLCAELGLATDRLDGRVPPDARSGLVRNFNAGRGGRVMLLSCVAGGAG 603
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ--AH 637
LNL+GA RLV+FD WNPA+D+QAMARVWRDGQ +P +YR L+ G++EEK+ QRQ H
Sbjct: 604 LNLVGACRLVLFDTSWNPAHDNQAMARVWRDGQTRPVTIYRLLAAGTVEEKVFQRQLLKH 663
Query: 638 KKALSSC-------VVDCEEDVARHFSMSELRSLFQL 667
++A ++ + DV R F+ EL L +
Sbjct: 664 REAAAAGYGGESIGGDGGKTDVGR-FTRDELSELVRF 699
>gi|402586718|gb|EJW80655.1| type III restriction enzyme, partial [Wuchereria bancrofti]
Length = 660
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 217/588 (36%), Positives = 322/588 (54%), Gaps = 76/588 (12%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
D D + VD ++ LRPHQ++GV FMY C+ G G I+ADEMGLGKT+Q I
Sbjct: 3 DDDGFVRRIAVDVQIARHLRPHQKDGVAFMYRCLKGSH----GGAILADEMGLGKTVQTI 58
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW------LGGRVAALPIDGGSK 242
+L+ L+++ KP+I K IIV P+SL+ NW E KW + RV
Sbjct: 59 SLITALIKKRLNQKPIIRKCIIVVPTSLLNNWYAEFMKWSPQTQTMLFRVL--------- 109
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
KL + R + I ++S+E A+ L V L++CDE HR+KN +
Sbjct: 110 -----KLTDLEKLISYRNTSMIAIVSHEMIARTAAKLSVVSVDLLVCDEAHRIKNLNGRL 164
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
+ L L A+RR+LL+GTP+QNDL E++SLV+F + + EF+ E
Sbjct: 165 REQLQILHAQRRLLLTGTPMQNDLEEFYSLVNFARPDLFISFSEFKNLCEM--------- 215
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK---TEQVVCIKMTDLQKELYT 419
E T+ NE L ++ ++RRT+ ++ LP K + +V + + LQ +Y
Sbjct: 216 ----EPTRFNELLAEV-------MLRRTAEVIHDLLPPKKQVVDYIVWCRPSALQCSIYK 264
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD----KIQT----GADGF 471
NL K L L+ I +L+KLCNHP L+ K QT G F
Sbjct: 265 NLKKF--------------LPYDHLTLIDALRKLCNHPSLLYQSMIVKRQTCKVVGEREF 310
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
NA L + ++ + L S KL V +L + ++K+V+VSN+TQTLDL E
Sbjct: 311 YNA---LLQSFPNTFSAFSLSTTDSGKLNVFVELLGTFR-EQEEKVVIVSNFTQTLDLLE 366
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVM 590
L + Y +RLDGS KKR ++VE FN SN+ + F+LS+KAGG GLNL+GANR+++
Sbjct: 367 ELCRTLYYTILRLDGSTEAKKRMEIVEEFNSLSNKNYAFLLSAKAGGLGLNLVGANRMIL 426
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
FD DWNPA D QAMAR+WR GQ++PC ++R ++ G+++EK++QRQ K +L++ V
Sbjct: 427 FDSDWNPAVDMQAMARIWRQGQERPCHIFRLVTAGTVDEKILQRQIKKSSLNTVVEMVPV 486
Query: 651 DVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESD 698
+ HFS EL+ +F L + +TH ++C +C +G + P L++D
Sbjct: 487 ESVTHFSDEELQDIFTLRDEAECETHCLLEC-QC-DGRGLLPEQLQAD 532
>gi|47211680|emb|CAF92844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 295
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 206/293 (70%), Gaps = 50/293 (17%)
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
++VLD +LA+ K TTDDK+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRA++VE
Sbjct: 1 MLVLDYILAITKTTTDDKVVLVSNYTQTLDLFEKLCRSRRYSYVRLDGTMSIKKRARMVE 60
Query: 559 TFNKTS--------------------------NEFIFMLSSKAGGCGLNLIGANRLVMFD 592
FN+ S EFIFMLSSKAGGCGLNLIGANRLVMFD
Sbjct: 61 RFNEASVSGGAGSTRPPGSGCSWASPLRLWQSPEFIFMLSSKAGGCGLNLIGANRLVMFD 120
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLS------------------------TGSIE 628
PDWNPAND+QAMARVWRDGQ+K C++YR L+ TG+IE
Sbjct: 121 PDWNPANDEQAMARVWRDGQRKTCYIYRLLAVRAAQTRCRRRRCAAVTGVCVCPQTGTIE 180
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
EK++QRQAHKKALSSCVVD E++V RHFS+ ELR LF L E+T+SDTHD+ +C RCVNG
Sbjct: 181 EKILQRQAHKKALSSCVVDEEQNVERHFSLGELRELFTLNEDTVSDTHDRFRCRRCVNGR 240
Query: 689 QVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
+V+PP +DCT DLS W+H +K+ L D +LK CW A VSFVF+Q S + +K
Sbjct: 241 EVRPPAEGADCTSDLSQWNHCFDKKGLRDQVLKACWDAAVSFVFHQRSHETQK 293
>gi|145482121|ref|XP_001427083.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394162|emb|CAK59685.1| unnamed protein product [Paramecium tetraurelia]
Length = 761
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 200/546 (36%), Positives = 310/546 (56%), Gaps = 50/546 (9%)
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
VD L LR HQ EGV+FM ECVTG + + GCI+AD MGLGKTLQ ITLMW L++
Sbjct: 141 VDQFLYKQLRAHQIEGVRFMLECVTGKKGKSIRGCILADSMGLGKTLQAITLMWILIQSH 200
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG-GSKAEIDNKLNSFMQTYG 257
I K +I P SL+ NW EI KWLG + P+ G+K E++ ++ F+ +
Sbjct: 201 E-----ISKIVITCPVSLIGNWEKEIKKWLGP-MRLQPLSAIGTKDEVNKQVKYFLYS-- 252
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
P N +L+ SYETFR+ + + K + L++CDEGHRLKN +T QA+ LK KRR++L
Sbjct: 253 --PYN-LLLTSYETFRNICNEIDK-VIDLLICDEGHRLKNSNIKTVQAMNQLKCKRRIVL 308
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SGTPIQN++ E+++ FVN GI + + F+ ++ PI + +S R ++
Sbjct: 309 SGTPIQNNMKEFYACCDFVNPGIFSSYKTFKLVFQDPIEMSMEKGSSAETVELGKLRSQE 368
Query: 378 LIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
L + ++ ++RR +LSK+LP K E ++ MT Q+ LY +R+++ N+
Sbjct: 369 LSSLTSQFILRRKPEILSKFLPSKFEYLIFCTMTPQQQVLY---------KRSLQLCPNS 419
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
+ + L+K+ HP L+ D A+ ++ + + K+L++
Sbjct: 420 -----VMMQLNLLRKVTTHPKLIEDDESQAAEKL-----VVQDYQSVKFNCLKILVDQCK 469
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
+ ++K+V+ S Y QTLD E K++RLDG + K+R +V
Sbjct: 470 E--------------QNEKVVINSYYRQTLDQIEHNLIQWNLKFLRLDGKVVQKQRLTLV 515
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+ FNK + +F+L+ K+GG GLNL+GAN+++ + DWNPAND Q M R+WRDGQ+K
Sbjct: 516 DEFNKDKDITVFLLNGKSGGTGLNLVGANKMICVEVDWNPANDSQVMGRIWRDGQQKQVH 575
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT---ISD 674
+YR ++ G+ EEK+MQRQ K+ LS +VD E+ + F+ EL+ L +++ I D
Sbjct: 576 IYRLITCGTYEEKIMQRQLTKENLSQNIVD-EKSLQNQFTTEELKDLLTYKDSQKCYIFD 634
Query: 675 THDKIK 680
DK++
Sbjct: 635 QSDKLE 640
>gi|328856433|gb|EGG05554.1| hypothetical protein MELLADRAFT_87820 [Melampsora larici-populina
98AG31]
Length = 593
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 190/490 (38%), Positives = 294/490 (60%), Gaps = 40/490 (8%)
Query: 209 IIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVI 267
+IV P +LVKNW E+ KWLG R+ DG S ++ + P I++I
Sbjct: 1 MIVCPVTLVKNWAREMNKWLGRSRLNMFVADGKSN----------IKHFTSSPYYNIIII 50
Query: 268 SYETFRSHASVLHK--NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
YE R+ + ++ +GL++ DEGHRLK+ E++T QAL LK RRV+LSGTPIQN+
Sbjct: 51 GYERLRTLSQEINAVYPPIGLIIADEGHRLKSIEAKTTQALRTLKTHRRVVLSGTPIQNN 110
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L EY+++V FVN GIL Q F+K++E PI + ++ ++ +++ R ++L + +
Sbjct: 111 LNEYYAMVDFVNPGILSDFQTFKKKFEQPIAKSREPGSTPSQKALGRSRADELAELSDSY 170
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
++RR S +++ +LP + + + I + QK++Y + S +R G + +L +
Sbjct: 171 VLRRGSDVIAHHLPPRHDYCLFIDLAAAQKKIYAATLASPEIRAVFSGESSQQLVL---- 226
Query: 446 SITSLKKLCNHPDLVMDK--IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
I +LKKLCN L++++ IQ A +NA + P + I+LS K++ L
Sbjct: 227 -INTLKKLCNSAGLLINETSIQNLA---KNASTLFPAWVTRND------IKLSGKMIALA 276
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
+ L ++ TD+KI+LVSN+T TLD+ E + + Y RLDG KR +V+TFN+
Sbjct: 277 SFLKILHAKTDEKIILVSNFTSTLDVIEAHCRSQNYSLCRLDGKTPQTKRDDIVQTFNRM 336
Query: 564 S--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+ ++F+F+LSSK+GG GLNLIGA+RL++FD DWNPA D QAMAR+WR GQKK C +YRF
Sbjct: 337 TARSQFVFLLSSKSGGVGLNLIGASRLILFDSDWNPATDLQAMARIWRQGQKKACHIYRF 396
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH-------FSMSELRSLFQLEENTISD 674
L+TG+I+E + QRQ K L++ ++ + V+R F+ EL+ LF+L T
Sbjct: 397 LATGTIDECIFQRQVTKTGLATDLIK-DAGVSREVLDRGNTFTSDELKRLFELHTGTPCH 455
Query: 675 THDKIKCSRC 684
THD + C RC
Sbjct: 456 THDLLGC-RC 464
>gi|145350214|ref|XP_001419509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579741|gb|ABO97802.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 341 bits (875), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 205/559 (36%), Positives = 304/559 (54%), Gaps = 29/559 (5%)
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HD A +ALV T + + + V DP +S LR HQR G ++MY +
Sbjct: 36 HDAEARDALVFATETECERY-AEATNGTARAASVTCDPFVSGKLREHQRAGARWMYRALH 94
Query: 164 GVRIEDAY------GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLV 217
G+ EDA G ++ADEMGLGK+LQ + ++WT+LRQGP KP +A+ V P+SL+
Sbjct: 95 GIG-EDAASEGGTRGVLLADEMGLGKSLQVLAVLWTMLRQGPCGKPTARRAVFVCPASLI 153
Query: 218 KNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN-----PILVISYET 271
NW E TKWLGG RV A +G ++A +D + + + + P+LV+SYET
Sbjct: 154 GNWGAEFTKWLGGVRVQASLAEGNAEA-VDAACDRWCAEPAKGSKSSFDRWPVLVMSYET 212
Query: 272 FRSHASVLHKNEVGLVLCDEGHRLKNC-ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYF 330
R A + + L++CDE HRL+N SQT AL + A RVLL+GTPIQN+L EY
Sbjct: 213 ARRLAPRVRAMKPELMVCDEAHRLRNAMGSQTMTALREINAPMRVLLTGTPIQNNLNEYA 272
Query: 331 SLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT 390
+++ F GILG ++F++ + PI R + AS + + + ++L ++ R
Sbjct: 273 AVLDFAQPGILGPLEDFQRDFTQPIQRQYERGASKEQIAQGRKVADELNRRTKGKILSRK 332
Query: 391 SALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSL 450
S+ + YLP KTE VV ++T Q++ Y K V + G AL +I L
Sbjct: 333 SSTNAAYLPKKTELVVLCRLTSAQRQAYEAGAK--LVESWTSSDTSASSGAAALCAIGIL 390
Query: 451 KKLCNHPDLVMDKIQ-TGADGFENAM-NILPTGYAASYKSGKLLIELSAKLMVLDTMLAV 508
++ N D ++ + D + AM LP YA I+ S K +L ML
Sbjct: 391 RQTANEVDQILARTSGKSVDDLKAAMAKALPRDYAGG-------IDGSGKFTILRRMLEA 443
Query: 509 IKMTTD--DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE 566
+K D +++V+VS Y+ +L E + K RLDG++ + R +V+ FN
Sbjct: 444 LKERGDPTERVVVVSGYSASLATAEDICKKLNVTTSRLDGTVAVDLRTSIVKNFNSGQGG 503
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
+ +LS AGG GLNL+GANRL++ D WNPA+D QAM R+WRDGQ KP +YR +S G+
Sbjct: 504 QVMLLSVVAGGAGLNLVGANRLILMDVSWNPAHDRQAMGRIWRDGQTKPVTIYRLVSAGT 563
Query: 627 IEEKMMQRQAHKKALSSCV 645
+E+K+ +RQ K+ L + V
Sbjct: 564 VEQKVFERQLGKEVLKNTV 582
>gi|341886127|gb|EGT42062.1| hypothetical protein CAEBREN_11522 [Caenorhabditis brenneri]
Length = 922
Score = 338 bits (868), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 207/566 (36%), Positives = 311/566 (54%), Gaps = 60/566 (10%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
+ VV DP + LR HQ+EG++F++E + D+ G I+AD+MGLGK++Q + W L
Sbjct: 231 IAVVADPRFAKQLRDHQKEGIRFIFERLKS----DSGGAILADDMGLGKSIQTMAATWAL 286
Query: 195 LRQGPLAKPLI-DKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM 253
LR P I + +I+ PSSLV NW E KW R+ P A+ ++S+
Sbjct: 287 LRGSKAPSPQIANSCLIIVPSSLVNNWKAEFEKWW--RLMRFP---AVMAQTAKDISSYQ 341
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
T + P LVISY+ + H L +++CDEGH+LKN + + + L+ L+ R
Sbjct: 342 STVKQMPY---LVISYDMAQRHVEKLRMIHFDIIVCDEGHKLKNLDGKLRRTLLSLEIPR 398
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R++L+GTP+QND E++SL+ FV GT EFRK N+
Sbjct: 399 RLILTGTPMQNDFDEFYSLLDFVRPNEFGTLAEFRKM--------------------CND 438
Query: 374 RLEQLIGIVNRCLIRRTSALLS-KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
EQL +++ C++RRT+A ++ +LP K E ++ + +Q+ +++ + M
Sbjct: 439 NPEQLNELIDDCMLRRTAADVNLTHLPEKHEYILFCAASQIQQNIHSEICD------YMT 492
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD--GFENAMNILPTGYAASYKSGK 490
G ALS I ++L NHP L++D ++ D G ++ I G
Sbjct: 493 GD--------ALSLIFFARQLANHPKLLLDNLREKNDKPGSKSLKQIQKHSALLLAFDGL 544
Query: 491 LL----IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
+ ++ S KL+ L ML + + V+VSNY +TLD+ E+L + +K RLDG
Sbjct: 545 NMPRGGVKESGKLIALVEMLKCFR-GLQECAVIVSNYIETLDMIEQLCEYLDFKVFRLDG 603
Query: 547 SMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
++ R K+V+ FN + IF+LS+KAGG GLNLIGA+RLV+FD DWNPAND QAMA
Sbjct: 604 KTQVQDRQKLVKHFNDQRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQQAMA 663
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE--DVARHFSMSELRS 663
R+WRDGQ +PC +YR ++TG+IEEKM+QRQ K L CV+D E + F+ EL+
Sbjct: 664 RIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIEVGESVSTFTDEELKD 722
Query: 664 LFQLE-ENTISDTHDKIKCSRCVNGI 688
+F + T +THD C NG+
Sbjct: 723 IFTFTGDQTECNTHDLCGCPCDGNGM 748
>gi|412990619|emb|CCO17991.1| DNA repair and recombination protein RAD54 [Bathycoccus prasinos]
Length = 821
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 224/600 (37%), Positives = 326/600 (54%), Gaps = 65/600 (10%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K ++ APNA VLY + + + +V+DP ++ LRPHQ+ GVKFM E
Sbjct: 198 KPVYSIDAPNACVLYDGQKPNTIG---------PIPLVLDPSIARFLRPHQKRGVKFMLE 248
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID----------KAII 210
+ E GC+++ ++GLGKTLQ I L+WT+LRQ P +P D KAII
Sbjct: 249 SCLNITSETRSGCLLSHDVGLGKTLQVIALIWTMLRQSP--RPSYDVHRDIRCSITKAII 306
Query: 211 VAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNK--LNSFMQTYGRRPVNPILVIS 268
P++LV NW NE KWL ++ IDG + ++ K L + +R + +LV S
Sbjct: 307 AVPATLVGNWKNEFKKWLDLKIEIEAIDGSNTSDAAKKQLLKEWALENQKRRL--VLVCS 364
Query: 269 YETFRSHASVLHKNEVGLVLCDEGHRLKNCE-SQTYQALMGLKAKRRVLLSGTPIQNDLL 327
YET R++A +L +N+ L++CDE HRLK + S+T L L K RVLLSGT +QN+L
Sbjct: 365 YETLRANAHLL-ENKAQLLVCDEAHRLKAKDGSKTLDGLKKLNCKMRVLLSGTAVQNNLA 423
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER----TKANERLEQLIGIVN 383
E++SL+ F N G+L Q FRK Y+ P R D+ A++ E+ +A E+ ++
Sbjct: 424 EFYSLMDFANPGVLNDYQTFRKVYQLPAERANDTKATEEEKMIGKARAKAIFEKTAIFID 483
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
RC S + LP KTE + + +T+ Q++ Y K+ + MK +N
Sbjct: 484 RCA---KSDVHIDGLPPKTEYCLFLSLTEAQQKSY----KAVCDQVIMKRVDN------P 530
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
L + L+K+CN ++ + ++ + L A + +E S KL VL
Sbjct: 531 LVACGVLQKVCNGIGMLSSSSSSSSNELQ-----LAIQEANKVTTTTDPLETSVKLRVLK 585
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERL--SKLRGYKYVRLDGSMTIKKRAKVVETFN 561
++ + +D++V+VS +T TLD+ E+ S G ++ RLDG+ KR ++V TFN
Sbjct: 586 KIVD-LSQKMNDRVVVVSGWTSTLDIIEKALSSTSPGLRFTRLDGTTPSHKRTQLVTTFN 644
Query: 562 KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+F+LS KAGG GLNLIGANRLV+FD DWNPAND QA AR+ RDGQ K F+YR
Sbjct: 645 NGHGGSVFLLSRKAGGVGLNLIGANRLVLFDCDWNPANDLQATARIHRDGQMKNTFIYRL 704
Query: 622 LSTGSIEEKMMQRQAHKKALS-SCVVDCEEDVA------------RHFSMSELRSLFQLE 668
LS ++EEK+ QRQ K AL+ S C E+ + FS ELR LF+ E
Sbjct: 705 LSAFTLEEKIFQRQCQKGALARSMGFACVENATNNKDDDDEDNDPKTFSSDELRKLFKFE 764
>gi|344250512|gb|EGW06616.1| DNA repair and recombination protein RAD54B [Cricetulus griseus]
Length = 498
Score = 338 bits (867), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 190/412 (46%), Positives = 258/412 (62%), Gaps = 15/412 (3%)
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L++CDEGHRLKN +T AL L ++RV+L+GTP+QNDL E+F+LV FVN GILG+
Sbjct: 16 LLICDEGHRLKNSSIKTTAALFSLPCEKRVILTGTPVQNDLQEFFALVDFVNPGILGSLP 75
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
+RK YE PI+ ++ +S E+ R +L + R ++RRT +++KYLP K E V
Sbjct: 76 SYRKIYEEPIIMSREPSSSKEEKELGERRAVELSCLTGRFILRRTQEVINKYLPPKIENV 135
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
V + LQ ELY L+ S +VR ++G EN+ T L I +LKKLCNHP L+ +
Sbjct: 136 VFCQPVALQTELYRKLLSSQSVRFCLQGLLENS----THLICIGALKKLCNHPCLLFSSV 191
Query: 465 QTG--ADGFEN-AMNI---LPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKI 517
++ + EN MN+ L T Y Y + S KL VL +LA I ++ +K+
Sbjct: 192 KSKEFSSSDENEEMNLCKGLLTLYPTGYDPLQFSENESGKLQVLVKLLAAIHELRPTEKV 251
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAG 576
VLVSNY QTL++ E + K GY RLDG + +R ++V+ FN K S +FIF+LSSKAG
Sbjct: 252 VLVSNYRQTLNILEGICKRHGYACARLDGQTPVSQRQQIVDNFNSKYSTDFIFLLSSKAG 311
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEEK+ QRQ
Sbjct: 312 GVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQI 371
Query: 637 HKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
K+ LS VVD + FS+ EL+ LF L EN+ THD + C C G
Sbjct: 372 SKQGLSGAVVDLTKSSEHIQFSVEELKDLFTLHENSQCVTHDLLDC-ECTGG 422
>gi|224013540|ref|XP_002296434.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968786|gb|EED87130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1089
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 214/592 (36%), Positives = 310/592 (52%), Gaps = 95/592 (16%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIE---------------------------- 168
+ V +S +LRPHQREG+ F++ CVTGV E
Sbjct: 339 INVPASISTVLRPHQREGIAFLWNCVTGVNGELNRAMERSWMNNNSKGGTMDGDSEDSDE 398
Query: 169 ----------DAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVK 218
G ++ADEMGLGKTL I ++ R + + I+V PSSLV
Sbjct: 399 DVGKKGGGVVVPRGAVLADEMGLGKTLMTIATIYAFHR-----RQRDRRFIVVCPSSLVS 453
Query: 219 NWCNEITKWLGG-----RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP----ILVISY 269
NW E KWLG RV A G + + N L SF+ P P +L++SY
Sbjct: 454 NWAKEFDKWLGKASQPKRVIA---KNGGEEGLRN-LRSFV------PPKPQQAEVLILSY 503
Query: 270 ETFRSHASVLHK-NEVGLVLCDEGHRLKNCE-SQTYQALMGLKAKRRVLLSGTPIQNDLL 327
E FR HA ++ K +G+++ DEGHRLKN SQT AL + A+ R+L++GTPIQN+L
Sbjct: 504 ELFRLHAKIISKATRIGILVVDEGHRLKNTAGSQTLSALNSVDAEARILITGTPIQNNLS 563
Query: 328 EYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLI 387
E++++ +F GILG +FR+ YE P+ + +S + K E+ ++L I + +I
Sbjct: 564 EFYNVANFALPGILGELSDFRRLYERPMSQANQKNSSKTQNEKGREQSKKLDAITSTFVI 623
Query: 388 RRTSA-LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
RR +L LP +TE ++ + T+ Q ELY + S+ R++ T L+
Sbjct: 624 RRLQKDVLKSLLPPRTELLLFCRPTERQCELYREI--SNRASRSIGSIRGRDDNDTPLTL 681
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
+T ++KLC HP L+ N + + + SGKL+ VL +++
Sbjct: 682 LTEVRKLCTHPSLL------------NKDDSSLSASDDASLSGKLI--------VLSSLI 721
Query: 507 AVIK-MTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
I+ DK+++ SN+T L + E + + + ++RLDGS+ R +V++FN S
Sbjct: 722 ESIREHHPTDKVIITSNFTTALTVVENSILRKKNLPFIRLDGSVDNASRQPIVDSFNNNS 781
Query: 565 --NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
+ F F LSSKAGGCGLNLIGANRL+M D DWNPA D Q MARV+R GQKKPC++YR
Sbjct: 782 VNHSFAFTLSSKAGGCGLNLIGANRLIMVDADWNPATDQQVMARVYRQGQKKPCYIYRMF 841
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDC----EEDVARHFSMSELRSLFQLEEN 670
+TG++EE + QRQ K L+ D E A FS ELR F L+E+
Sbjct: 842 TTGTVEEVIFQRQTQKGNLAKLANDGGSRNEGKTAAKFSAEELRDCFTLKED 893
>gi|119612120|gb|EAW91714.1| hCG2009220, isoform CRA_d [Homo sapiens]
Length = 499
Score = 334 bits (857), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 200/491 (40%), Positives = 283/491 (57%), Gaps = 47/491 (9%)
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN GILG+
Sbjct: 16 LLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLS 75
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
+RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYLP K E V
Sbjct: 76 SYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENV 135
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
V + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP L+ + I
Sbjct: 136 VFCRPGALQIELYRKLLNSQVVRFCLQGLLENSP----HLICIGALKKLCNHPCLLFNSI 191
Query: 465 Q-----TGADG------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI-KMT 512
+ + D ++ +++ P Y + K S KL VL +LAVI ++
Sbjct: 192 KEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEK----ESGKLQVLSKLLAVIHELR 247
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFML 571
+K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FIF+L
Sbjct: 248 PTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLL 307
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
SSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IEEK+
Sbjct: 308 SSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKI 367
Query: 632 MQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCV----- 685
QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 368 YQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGEEVH 426
Query: 686 NGIQVKPPPLESDC----------------TDDLSCWHHVTEKRW-LVDPILKHCWGAGV 728
G ++ + DC L W H + L DP L+ V
Sbjct: 427 TGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-TENV 485
Query: 729 SFVFYQHSTKA 739
SF+F +T+A
Sbjct: 486 SFIFQNITTQA 496
>gi|385302472|gb|EIF46602.1| dna repair and recombination protein rad54 [Dekkera bruxellensis
AWRI1499]
Length = 567
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 174/332 (52%), Positives = 226/332 (68%), Gaps = 12/332 (3%)
Query: 118 PQLSAHDLLKIDKDK------IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
P S +DLL I+ D+ V VV+DP L+ +LRPHQ GVKF+Y C +G+ A
Sbjct: 232 PNRSLNDLLDINPDEDPSSKFPNVPVVIDPKLAKVLRPHQISGVKFLYRCTSGMVDAKAX 291
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-G 230
CIMADEMGLGKTLQC+TLMWTL++QGP + I+K IIV PSSLV+NW NEI KWLG G
Sbjct: 292 XCIMADEMGLGKTLQCLTLMWTLMKQGPRGRKTINKCIIVCPSSLVRNWANEIDKWLGKG 351
Query: 231 RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN-EVGLV 287
+ L +DG S I + L + G V P+L+ISYET R + ++H + EVGL+
Sbjct: 352 SLKYLAMDGRSTKGITVGDALTRWANAKGSSIVTPVLIISYETLRRN--IMHLDCEVGLI 409
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
L DEGHRLKN +S T+ AL L RRV+LSGTPIQNDL EYFSL+ F N G+LG+ EF
Sbjct: 410 LADEGHRLKNGDSLTFNALNSLNCTRRVILSGTPIQNDLSEYFSLLTFANPGLLGSRAEF 469
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
RK YE ILRG+DS A+D ER K +++L L +V+R +IRRT+ +LSKYLPVK E V+
Sbjct: 470 RKDYELDILRGRDSLATDXEREKGDQKLRDLTDVVSRFIIRRTNDILSKYLPVKYEYVIF 529
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
+++DLQK+LY + S ++R M+G + L
Sbjct: 530 CELSDLQKKLYKYFLTSPEIKRLMRGQHSQPL 561
>gi|392902165|ref|NP_001255913.1| Protein Y116A8C.13, isoform a [Caenorhabditis elegans]
gi|34556097|emb|CAB55149.2| Protein Y116A8C.13, isoform a [Caenorhabditis elegans]
Length = 833
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 310/555 (55%), Gaps = 57/555 (10%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECV--TGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VD + LRPHQ+ G++F+++ + + G I+AD+MGLGK+LQ + W L
Sbjct: 196 VTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGAILADDMGLGKSLQTMAATWAL 255
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQ 254
L+ A+ L + +I+ PSSLV NW E KW R+ P A N + ++
Sbjct: 256 LKGSKTAQQLANSCLIIVPSSLVNNWKAEFDKWW--RLMRFP---AVIALTANDITTYQS 310
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
T + P LVISY+ + H L +++CDEGH+LKN + + + L+ L+ RR
Sbjct: 311 TIK---LMPYLVISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRR 367
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++L+GTP+QND E++SL+ FV + G+ EFRK ++R
Sbjct: 368 LILTGTPMQNDFEEFYSLLDFVRPSVFGSIVEFRKM--------------------CSDR 407
Query: 375 LEQLIGIVNRCLIRRTSALLS-KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
EQL +++ C++RRT+A + K+LP K E ++ + +QK +++ + M G
Sbjct: 408 PEQLNELIDECMLRRTAADVDLKHLPEKHEYILFCAASPIQKHVHSEICD------YMTG 461
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD---GFENAMNILPTGYAASYKSGK 490
ALS I ++L NHP L++D ++ + +++ +L A + G
Sbjct: 462 D--------ALSLIFFARQLANHPKLLLDNLREKTEKSKAHKHSPLLLAFDGAHMPRGG- 512
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
++ S KL L M+ ++ + V+VSNY +TLD+ ++L + +K +RLDG +
Sbjct: 513 --VKESGKLTALVDMIKCFRLL-QECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQV 569
Query: 551 KKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
R K+V TFN + IF+LS+KAGG GLNLIGA+RLV+FD DWNPAND QAMAR+WR
Sbjct: 570 PDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQQAMARIWR 629
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE--DVARHFSMSELRSLFQL 667
DGQ +PC +YR ++TG+IEEKM+QRQ K L CV+D E D F+ +L+ +F
Sbjct: 630 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIEVGDTIATFTDEDLKDIFTF 688
Query: 668 EEN-TISDTHDKIKC 681
+ T +THD +C
Sbjct: 689 TGSATECNTHDLCEC 703
>gi|392902167|ref|NP_001255914.1| Protein Y116A8C.13, isoform b [Caenorhabditis elegans]
gi|290457487|emb|CBK19482.1| Protein Y116A8C.13, isoform b [Caenorhabditis elegans]
Length = 720
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 201/555 (36%), Positives = 310/555 (55%), Gaps = 57/555 (10%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECV--TGVRIEDAYGCIMADEMGLGKTLQCITLMWTL 194
V VD + LRPHQ+ G++F+++ + + G I+AD+MGLGK+LQ + W L
Sbjct: 83 VTVDTRFARHLRPHQKSGIQFIFDRLRRGSGKNGGGGGAILADDMGLGKSLQTMAATWAL 142
Query: 195 LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQ 254
L+ A+ L + +I+ PSSLV NW E KW R+ P A N + ++
Sbjct: 143 LKGSKTAQQLANSCLIIVPSSLVNNWKAEFDKWW--RLMRFP---AVIALTANDITTYQS 197
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
T + P LVISY+ + H L +++CDEGH+LKN + + + L+ L+ RR
Sbjct: 198 TIK---LMPYLVISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRR 254
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++L+GTP+QND E++SL+ FV + G+ EFRK ++R
Sbjct: 255 LILTGTPMQNDFEEFYSLLDFVRPSVFGSIVEFRKM--------------------CSDR 294
Query: 375 LEQLIGIVNRCLIRRTSALLS-KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
EQL +++ C++RRT+A + K+LP K E ++ + +QK +++ + M G
Sbjct: 295 PEQLNELIDECMLRRTAADVDLKHLPEKHEYILFCAASPIQKHVHSEICDY------MTG 348
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD---GFENAMNILPTGYAASYKSGK 490
ALS I ++L NHP L++D ++ + +++ +L A + G
Sbjct: 349 D--------ALSLIFFARQLANHPKLLLDNLREKTEKSKAHKHSPLLLAFDGAHMPRGG- 399
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
++ S KL L M+ ++ + V+VSNY +TLD+ ++L + +K +RLDG +
Sbjct: 400 --VKESGKLTALVDMIKCFRLL-QECTVIVSNYIETLDMIQQLCEYLNFKVLRLDGKTQV 456
Query: 551 KKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
R K+V TFN + IF+LS+KAGG GLNLIGA+RLV+FD DWNPAND QAMAR+WR
Sbjct: 457 PDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQQAMARIWR 516
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE--DVARHFSMSELRSLFQL 667
DGQ +PC +YR ++TG+IEEKM+QRQ K L CV+D E D F+ +L+ +F
Sbjct: 517 DGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIEVGDTIATFTDEDLKDIFTF 575
Query: 668 EEN-TISDTHDKIKC 681
+ T +THD +C
Sbjct: 576 TGSATECNTHDLCEC 590
>gi|219128189|ref|XP_002184301.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404102|gb|EEC44050.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 975
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 219/612 (35%), Positives = 321/612 (52%), Gaps = 80/612 (13%)
Query: 116 TPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC-----VTGVRIED- 169
+PPQ S + L +V + + ++LRPHQ EGV+F+++ V+G D
Sbjct: 294 SPPQSSTNLL---------ANVPLPASVRSVLRPHQEEGVEFLWQALAPMAVSGNEQNDT 344
Query: 170 ---AYGCIMADEMGLGKTLQCITLMWTLLRQ-----GPLA-KPL-------IDKAIIVAP 213
A G I+ADEMGLGKTL I ++ L R+ PL+ KP + I+V P
Sbjct: 345 QSPARGAILADEMGLGKTLMTIAIIAGLHRRQRDKTTPLSVKPSQLLCFGSFQQFIVVCP 404
Query: 214 SSLVKNWCNEITKWLG--GRVAALPIDGGSKAEIDNKLNSFMQTY---------GRRPVN 262
SSLV NW E KW+G + + I G + + + M+ Y + +
Sbjct: 405 SSLVTNWAREFDKWIGRASQPKRVVIQKGGEEGV-----AAMRAYCAGMLKKKKQLQKIG 459
Query: 263 PILVISYETFRSHASVLHKN-EVGLVLCDEGHRLKNCE-SQTYQALMGLKAKRRVLLSGT 320
+L++SY+ R L GL++ DEGHRLKN S T AL L A R+ ++ T
Sbjct: 460 QVLIVSYDLLRRQVEHLQDACAFGLLVVDEGHRLKNTSGSLTLTALESLTADARLCITAT 519
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN+L E+++LV+FV +LG+ EFR ++ PI A+ ++ + ER L
Sbjct: 520 PMQNNLSEFYNLVNFVRPDVLGSLNEFRDSFDRPISAANHKHATPSQIATSRERSSALET 579
Query: 381 IVNRCLIRRTSA-LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
+ ++RR A +L LP + E ++ + ++ Q+ LY L + GG T
Sbjct: 580 LTKPFILRRLQADVLKSMLPPRVETLLFCRPSETQRALYHQLTAR------ISGGSCTDG 633
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
G AL ++T+L+K+C HP + D N+ P K I LS K+
Sbjct: 634 GTDALKTLTTLRKICTHPSICNDD------------NVKPWNRPEKGPCLKYDIALSGKM 681
Query: 500 MVLDTMLAVIKMTT-DDKIVLVSNYTQTLDLFERLS-KLRGYKYVRLDGSMTIKKRAKVV 557
VLD +L I+ +DKIV+VSNYT L + E L R ++RLDG +R +V
Sbjct: 682 TVLDKLLQSIRENAPNDKIVVVSNYTSALTIVESLILGPRKLGFLRLDGGTESSQRQPLV 741
Query: 558 ETFNKTSNEFIF--MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
E+FN++ E +F +LSSKAGGCGLNL+GANRL++ DPDWNPA+D QAM RV+R GQ KP
Sbjct: 742 ESFNRSHPEKVFCLLLSSKAGGCGLNLVGANRLLLLDPDWNPASDVQAMGRVYRQGQTKP 801
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC-------EEDVARHFSMSELRSLFQL- 667
C++YR +TG++EE ++QRQ K L++ VD D FS EL + F L
Sbjct: 802 CWIYRLFTTGTVEEVILQRQLQKGNLTAWTVDGGKSSRQNSSDSRAKFSKEELTAAFTLK 861
Query: 668 EENTISDTHDKI 679
+E I DT K+
Sbjct: 862 DEYCICDTKQKM 873
>gi|308807621|ref|XP_003081121.1| DNA-dependent ATPase, stimulates strand exchange by modifying the
topology of double-stranded DNA; i (ISS) [Ostreococcus
tauri]
gi|116059583|emb|CAL55290.1| DNA-dependent ATPase, stimulates strand exchange by modifying the
topology of double-stranded DNA; i (ISS) [Ostreococcus
tauri]
Length = 730
Score = 325 bits (834), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 199/583 (34%), Positives = 315/583 (54%), Gaps = 43/583 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKD-KIQVHVVVDPVLSNILRPHQREGVKFMY 159
+++HD +A AL T + ++ +K + Q+ V DP +S LR HQR G ++MY
Sbjct: 47 RSMHDASARGALTFATATE--CEEMCSREKHARCQLGVTCDPYVSGKLREHQRAGARWMY 104
Query: 160 ECVTGVRIED-----AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPS 214
+ G+ + G ++ADEMGLGK+LQ + ++WT+L QGP +P +A++V P+
Sbjct: 105 RALHGLDERERSNAGTRGVVLADEMGLGKSLQVLAVLWTMLTQGPSGEPTCRRAVLVCPA 164
Query: 215 SLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM---QTYGRRPVN--PILVISY 269
SL+ NW E KWLGG A + G+ +D + + +T + + P+LV+SY
Sbjct: 165 SLIGNWGAEFKKWLGGVRAQASLCEGNAEAVDAACDRWCAEPRTDSKSAFDRWPVLVMSY 224
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNC-ESQTYQALMGLKAKRRVLLSGTPIQNDLLE 328
ET R A + L++CDE HRL+N SQT AL ++A RVLL+GTP+QN+L E
Sbjct: 225 ETARRLAPRVRAMRPELMICDEAHRLRNAMGSQTMTALREIEAPMRVLLTGTPVQNNLNE 284
Query: 329 YFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIR 388
Y +++ F GILG+ ++F++ + PI R + AS+ E K + E+L + ++
Sbjct: 285 YAAVLDFAQPGILGSLEDFQRDFAQPIQRQYERGASEQEIAKGRKMAEELNRRTSGKILS 344
Query: 389 RTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT 448
R ++ + YLP KTE VV T Q+ Y + K V K + G AL +I
Sbjct: 345 RKASTNAAYLPKKTEIVVLCPPTQSQRMAYESGAK--LVETWTKKDNSASFGAAALCAIG 402
Query: 449 SLKKLCNHPDLVM------DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA----- 497
L++ N D ++ ++QT A+ E + + A + + + EL A
Sbjct: 403 ILRQAANEVDQILMQANSVAEVQTDAEK-ELDVEVESDAIARATTTETSVDELKAVMADA 461
Query: 498 -------------KLMVLDTMLAVIKMTTD--DKIVLVSNYTQTLDLFERLSKLRGYKYV 542
K VL ML +K D +++V+VS Y+ +L +++ K
Sbjct: 462 LPSGYGGGIDGSGKFTVLQRMLEALKDRGDCLERVVIVSGYSASLASADKICKKLDLPTS 521
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
RLDG++ + R +V+ FN + +LS AGG GLNL+GANRL++ D WNPA+D Q
Sbjct: 522 RLDGTVPVDLRTSIVKDFNNGDGGQVMLLSVVAGGAGLNLVGANRLILMDVSWNPAHDRQ 581
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
AM RVWRDGQ+KP +YR +++G++E+K+ +RQ K+ L + V
Sbjct: 582 AMGRVWRDGQRKPVTIYRLITSGTVEQKVFERQLGKEVLKNTV 624
>gi|300175571|emb|CBK20882.2| unnamed protein product [Blastocystis hominis]
Length = 571
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 194/517 (37%), Positives = 294/517 (56%), Gaps = 38/517 (7%)
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE-ITKWLG-GRVAALP 236
MGLGKTL I+L++T L Q P +KPLI A++ PSSLV NW E I KW+G R+ +
Sbjct: 1 MGLGKTLTAISLIFTSLTQSPWSKPLISSAVVTCPSSLVDNWGAEFIRKWIGRDRIRCIV 60
Query: 237 I-DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYET----------FRSHASVLHKNEVG 285
+ + GSKAE K+ F+ G V +LV+SYE +R +A ++ ++ G
Sbjct: 61 LKEKGSKAE--EKIRDFVMQSGLNRV--VLVVSYEVRLLFSPSFKMYRKYADAINGSKAG 116
Query: 286 LVLCDEGHRLKNCESQ-TYQALMGLKAKRRVLLSGTPIQNDL----------LEYFSLVH 334
L++CDEGHRLK+ T +L+ ++RRVLLSGTPIQNDL E F+L
Sbjct: 117 LLVCDEGHRLKSSTGNATIDSLLQFPSRRRVLLSGTPIQNDLEVGVDRPPNQQELFALSE 176
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA-L 393
FVN G+ + FR+ + PI G+ SDA+R A R +L I ++ ++RRT+A +
Sbjct: 177 FVNPGVFSSLASFRQLFVRPIEAGRRKGCSDADRDLAAMRSAELSRITDQFILRRTTASI 236
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L LP K + + Q++LY LI+ GG+ +L +T L + L+ L
Sbjct: 237 LRASLPPKITHYLFTPLASKQRQLYEKLIELQRGSLAEHGGDAGQLTLTFLHA---LRLL 293
Query: 454 CNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
C HP L+ + +Q+ +A++ L A ++ + S K+ ++ +LA I T
Sbjct: 294 CVHPSLIRESVQS-----TSALSSLLPILDADDQNQRDFTSQSVKMEAVELLLASILSHT 348
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLS 572
D++I+++S+YTQ LD + + Y RLDG + +R +V +FN + +++ +F+LS
Sbjct: 349 DEQILVISSYTQILDYLGSFCDSKKWGYFRLDGQTDVAQRQSLVNSFNHRYTSKRLFILS 408
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
++AGG GLN+ GA+R+VM +P WNPA D Q++AR WR GQ + FVYR GSIEE M+
Sbjct: 409 ARAGGVGLNITGASRVVMLEPAWNPAIDLQSIARAWRFGQTRRVFVYRLFVAGSIEEVML 468
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
QRQ KKA++ VD E+R +F+L+E
Sbjct: 469 QRQLLKKAIADVAVDHTAMGEGKLDREEMREVFRLKE 505
>gi|412990836|emb|CCO18208.1| Snf2 family protein [Bathycoccus prasinos]
Length = 793
Score = 315 bits (806), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 217/610 (35%), Positives = 320/610 (52%), Gaps = 91/610 (14%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKID---------KDKIQ-VHVVVDPVLSNILRPH 150
K LHDP APNALVL T + K+D K+K+ V VV+DP ++ LR H
Sbjct: 49 KPLHDPCAPNALVLVTAEEARK----KLDDESGFGGREKNKVPCVAVVMDPNIARKLRKH 104
Query: 151 QREGVKFMYECVTG---------------------VRIEDAYGCIMADEMGLGKTLQCIT 189
Q+EGV++MY + G I + G ++AD+MGLGKTLQ +
Sbjct: 105 QKEGVRWMYRKLFGFDDENKKNNNNSEISSNRNSNTNIIENSGVLLADDMGLGKTLQVLA 164
Query: 190 LMWTLLRQGP---LAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI 245
L WT+L+Q P L KP + ++ P++LV NW NE KW+G R + DGG++ +
Sbjct: 165 LAWTVLKQTPFPTLKKPF-KRILVTCPATLVGNWGNESKKWIGNVRAQCVTADGGAE-NV 222
Query: 246 DNKLNSFMQT---YGRRPVN------PILVISYETFRSHA-SVLHKNEVGLVLCDEGHRL 295
+ +++T +P+ PIL+ SYET R A + + L+ CDE HRL
Sbjct: 223 ERAFQKWIETNENVEEKPMQSSFDRFPILIASYETMRKMALRIPNHARPDLLYCDEAHRL 282
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN---QGILG--TAQEFRKQ 350
K+ +QT AL + AK RVL++GTPIQN+L+E+ +++ V + I G + +EF++
Sbjct: 283 KSDSNQTVDALKAVNAKHRVLMTGTPIQNNLMEFAAILDVVQPRAKAIFGWNSLEEFKEM 342
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL-LSKYLPVKTEQVVCIK 409
YE PI+ + S A+ ++ + E QL + + ++RR + L L +YL KTE ++
Sbjct: 343 YERPIMEARASEANAEQKKRGKELEAQLRKVTKKRILRRKAELVLKEYLVPKTEYLMLCN 402
Query: 410 MTDLQKELYTNLIKSDAVRRTMKGGEN-----TKLGMTALSSITSLKKLCNHPDLVMDKI 464
M+ QK Y + G N T ALS+I L++ N +D I
Sbjct: 403 MSGKQKRCY-------------EAGSNYFKKNTNKNNNALSAIGILRQCANSAKHCLDAI 449
Query: 465 QTGA---DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTD------- 514
F N I + + E S KL L +L +K +
Sbjct: 450 GRSTVLDKTFSNT--IRDAAEKKEEEDDEGEEECSGKLSALCLLLQSLKGINEKNRSVNN 507
Query: 515 ---DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
++V+VS Y+ LD ++L K G RLDGS+ KR+++V FN T N + +L
Sbjct: 508 GNYQRVVIVSGYSDQLDDADKLCKREGLTTTRLDGSVDKDKRSEMVRNFN-TGNVDVMLL 566
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S +AGG GLNLIGAN L++ D WNPA+D QAMARVWRDGQ+KP FVYR S G++EE++
Sbjct: 567 SVRAGGAGLNLIGANCLILMDASWNPADDRQAMARVWRDGQQKPVFVYRLASLGTVEERV 626
Query: 632 MQRQAHKKAL 641
+ RQ K++L
Sbjct: 627 LLRQLGKESL 636
>gi|440799275|gb|ELR20330.1| DNA repair and recombination protein RAD54, putative [Acanthamoeba
castellanii str. Neff]
Length = 509
Score = 311 bits (798), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 172/436 (39%), Positives = 249/436 (57%), Gaps = 45/436 (10%)
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+ NDL E++S++ FVN GILG ++FRK +E PI+ G+ A++ E+ + R + L +
Sbjct: 51 MNNDLEEFYSMIEFVNPGILGEREKFRKVFEEPIMAGRQPGATEKEKAIGDARSKMLSSL 110
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+ ++RRT+ +L KYLP K E V ++ LQK +Y + VR MK T
Sbjct: 111 TSIFILRRTADILRKYLPPKVEYTVFCRLAPLQKAIYRAI-----VREKMKVALETGRRD 165
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
ALSSIT LKKLCNHP LV Q + + + P + A + +LS K ++
Sbjct: 166 DALSSITMLKKLCNHPSLVYSMCQKNPEANKATLEAFPAKFQALESNP----QLSGKFLL 221
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
LD++L I+ T D+IV+ L + R + Y +LDG +K+R +V+ FN
Sbjct: 222 LDSLLKEIRKRTKDRIVIA-----------HLCRFRSWGYFQLDGGTPVKQRQNLVDQFN 270
Query: 562 KT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
+ EFIF+LSSKAGG GLNLIGANRL++FDPDWNPAND QAMARV RDGQKK FVYR
Sbjct: 271 NPFATEFIFLLSSKAGGVGLNLIGANRLILFDPDWNPANDLQAMARVHRDGQKKKVFVYR 330
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
FL+TG+IEEK+ QRQ K+ LSS VVD + + F++ +LR LF+ NT+ +THD +
Sbjct: 331 FLATGTIEEKIYQRQITKQGLSSSVVDAKTETKTQFTLDDLRDLFKYRSNTLCETHDLLD 390
Query: 681 CSRCVNGI------------------QVKPPPL-----ESDCT-DDLSCWHHVTEKRWLV 716
C C+ + Q++P + + D + ++L W H ++
Sbjct: 391 CKCCITKVEKEDGEEDDGFIDDDDADQIEPGYIVRRVKKKDFSGEELEGWDHYPSVEYVQ 450
Query: 717 DPILKHCWGAGVSFVF 732
D +LK ++F+F
Sbjct: 451 DEMLKRAVQETITFIF 466
>gi|297741293|emb|CBI32424.3| unnamed protein product [Vitis vinifera]
Length = 1112
Score = 311 bits (797), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/428 (42%), Positives = 261/428 (60%), Gaps = 43/428 (10%)
Query: 106 PTAPNALVLYTPPQL--SAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
P + LVL+ P + A +L+ I VVDP+L LRPHQREGV+FM++CV+
Sbjct: 142 PAGIDPLVLWHPEESEEQADNLMPI---------VVDPLLVRFLRPHQREGVQFMFDCVS 192
Query: 164 GVR-IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCN 222
G+ + GCI+AD+MGLGKTLQ ITL++TLLRQG K ++ KAIIV P+SLV NW
Sbjct: 193 GLSSTANISGCILADDMGLGKTLQSITLLYTLLRQGFDGKAMVKKAIIVTPTSLVSNWEA 252
Query: 223 EITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVL-HK 281
EI KW+G RV + + ++ ++ ++SF T P+ +L++SYETFR H+S H
Sbjct: 253 EIKKWVGERVQLVALCESTRDDVVFGIDSF--TSPHSPLQ-VLIVSYETFRMHSSKFSHS 309
Query: 282 NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGIL 341
L++CDE HRLKN ++ T +AL L KRRVLLSGTP+QNDL E+F++V+F N GIL
Sbjct: 310 GSCDLLICDEAHRLKNDQTLTNRALAALACKRRVLLSGTPMQNDLEEFFAMVNFTNPGIL 369
Query: 342 GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVK 401
G A FR+ YETPI+ G++ A++ E+ ER +L VN+ ++RRT+ALLS +LP K
Sbjct: 370 GDATYFRRYYETPIICGREPTAAEEEKKLGAERSAELSSTVNQFILRRTNALLSNHLPPK 429
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA-LSSITSLKKLCNHPDLV 460
+VVC +++ LQ ELY + I S V++ + N ++ + L+ IT+LKKLCNHP +
Sbjct: 430 IVEVVCCRLSPLQSELYNHFIHSKNVKKVI----NEEMKQSKILAYITALKKLCNHPKVF 485
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
G +N M+IL + L+++ M +I M DD
Sbjct: 486 ------GIRELKNQMHILKVWRVIN-------------LVLMKVMTILISMMIDDD---A 523
Query: 521 SNYTQTLD 528
N+++ L+
Sbjct: 524 QNFSRMLE 531
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 142/332 (42%), Positives = 190/332 (57%), Gaps = 56/332 (16%)
Query: 457 PDLVM-DKIQTG---ADGFENAMNILP----TGYAASYKSGK-LLIELSAKLMVLDTMLA 507
PDL++ D +++G GFE+ M P +G + ++ G+ + +ELS K+ VL +LA
Sbjct: 665 PDLLIYDTVKSGNQGTSGFEDCMRFFPPEMFSGRSGAWTGGEGIWVELSGKMHVLARLLA 724
Query: 508 VIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF-NKTSNE 566
++ TDD+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V F + +E
Sbjct: 725 HLRQKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLDGTTSINKRQKLVNRFSDPLKDE 784
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
F+F+LSSKAGGCGLNLIG NRLV+FDPDWNPAND QA ARVWRDGQKK ++YRFLSTG+
Sbjct: 785 FVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGT 844
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVAR----HFSMSELRSLFQLEENTISDTHDKIKCS 682
IEEK+ QRQ K+ L + ++D + S +LR LF EN S+ H+K+ C+
Sbjct: 845 IEEKVFQRQMSKEGLQKVIQQEQKDSLKTQGNFLSTEDLRDLFSFHENVRSEIHEKMNCN 904
Query: 683 RCVN------------GIQVKPPPLES---DCTD-------------------------- 701
RC N G + K +S DC D
Sbjct: 905 RCQNYDERPESVREEDGFESKNEGCQSYQMDCDDIGGFAGITGCLHKLKRSEKQVGTALE 964
Query: 702 -DLSCWHHVTEKRWLVDPILKHCWGAGVSFVF 732
DL W H + D I + G V+FVF
Sbjct: 965 EDLGSWGHHFFSTSVPDAIFQASAGDEVTFVF 996
>gi|302765559|ref|XP_002966200.1| hypothetical protein SELMODRAFT_407530 [Selaginella moellendorffii]
gi|300165620|gb|EFJ32227.1| hypothetical protein SELMODRAFT_407530 [Selaginella moellendorffii]
Length = 814
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 215/625 (34%), Positives = 324/625 (51%), Gaps = 95/625 (15%)
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQ---VHVVVDPVLSNILRPHQRE 153
EG+ + P L P Q+ D L ++ ++ VVVDP +++ LRPHQRE
Sbjct: 179 EGSDITVESARNPGRERLSRPMQILEKDQLVLNMAEVANGAAPVVVDPYIASKLRPHQRE 238
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAP 213
GVKFMYECV G+R GC++ADEMGLGKT+Q I L+WTLLRQ
Sbjct: 239 GVKFMYECVMGLRSRTFTGCLLADEMGLGKTVQVIALIWTLLRQ---------------- 282
Query: 214 SSLVKNWCNEITKWLGG-RVAALPIDGGSKAE---IDNKLNSFMQTYGRRPVNPILVISY 269
+ KWLG R+ A+ +D +A ID K +SF P+L+ SY
Sbjct: 283 ----------VRKWLGSERLKAMVVDCAREAAEKIIDFKNDSFC---------PLLITSY 323
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCE--------SQTYQALMGLKAKRRVLL---- 317
E R H ++ + L++CDE HRLK+CE ++T +L L +R+LL
Sbjct: 324 EILRKHKDIVASTNLELLICDEAHRLKSCENNQWFSKGNKTIASLASLNCNKRILLVRFC 383
Query: 318 -------------SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
+GTP QN+L E+++L+ F N +LG+ E++ Y +PI + +D AS
Sbjct: 384 SLHGFLTPGSDWQTGTPAQNNLSEFYALLDFANPELLGSYNEYKNIYASPIEQSRDRNAS 443
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
AE+ +ER E+L + + C++RRTS + ++LP K+E V K+ D+Q LY +KS
Sbjct: 444 HAEKELGSERSEELKQMTSFCILRRTSEINKEHLPPKSEYAVFCKLHDVQISLYEIFVKS 503
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ--TGAD-----GFENAMNI 477
V RTM + + + LS+I +L+KL +HP L+ ++ T A+ F A +
Sbjct: 504 QFV-RTMLNSDIQRAHV--LSAIGALRKLSSHPGLLQSDMKHVTSAEIKNQPFFHRAEEL 560
Query: 478 LP-TGYAASYKS-GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
L + AS + + LS K + L +L + + +D+IV+ SN+TQTLDL E +
Sbjct: 561 LDLSDVQASLRDVVRHDWSLSGKFVCLQHLL-LATIQCNDRIVIASNFTQTLDLIEAMCN 619
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNKTSNEF-IFMLSSKAGGCGLNLIGANRLVMFDPD 594
+K+VRLDG I +R +VE FN+ E IF+LSSKAGG GLNLIGANR + D
Sbjct: 620 EHSWKFVRLDGGTMISERQSLVERFNRRIGEASIFLLSSKAGGTGLNLIGANRQQLSDAR 679
Query: 595 WNPANDDQAMARVWRDG--QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
++ + + + R + +++P K +Q H + S+ C+
Sbjct: 680 FSRSRLESSKRRAGDESNMERRPAET----------SKNIQASVHWQ--STYQPTCKRTN 727
Query: 653 ARHFSMSELRSLFQLEENTISDTHD 677
+ FS ELR L +L T +T+D
Sbjct: 728 DQKFSRQELRELLKLPSETKCETYD 752
>gi|324505729|gb|ADY42457.1| DNA repair and recombination protein RAD54B [Ascaris suum]
Length = 746
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 199/560 (35%), Positives = 311/560 (55%), Gaps = 68/560 (12%)
Query: 121 SAHDLLKIDKDKIQVH----VVVDPVLSNILRPHQREGVKFMYECVTGVRIED-AYGCIM 175
S++D + ++K+++ V VV+D L+ LRPHQ+EG+ F++ R++D G I+
Sbjct: 203 SSYDFV-VNKNEVDVSGEDAVVLDGPLARHLRPHQKEGLTFLFR-----RLKDPGGGVIL 256
Query: 176 ADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAAL 235
ADEMGLGK++Q I+L+W LL+Q K I++AP+SL+ NW E KWL L
Sbjct: 257 ADEMGLGKSVQAISLLWILLKQLKQKGATSMKFILIAPTSLIGNWRCEFNKWLPHSEQLL 316
Query: 236 -PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHR 294
P+ S+ + FM G +P+L+ISY+ A +L K L++CDE HR
Sbjct: 317 FPVTKTSE------VRKFMAYSG---YSPVLLISYDVVVRCAELLEKISFALMICDEAHR 367
Query: 295 LKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETP 354
LKN Q++ L+ +RR+LL+GTPIQND+ E+FSL+ G+ +FR
Sbjct: 368 LKNFNGNLRQSVSRLRTERRLLLTGTPIQNDMSEFFSLLDLAKPAAFGSLAQFRSMM--- 424
Query: 355 ILRGQDSCASDAERTKANER-LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
ANE + + +++ L+RRT+ + LP + E V+ +++ +
Sbjct: 425 ----------------ANEDGMHDIQLLLSEILLRRTADVNFNNLPPRHEYVLWCRLSKV 468
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTA---LSSITSLKKLCNHPDLVMDKIQTGADG 470
Q+ +Y +I G+ + L+ I L+KLCNHP ++ + +
Sbjct: 469 QQLIYNRII-----------------GLASSDHLAIIDMLRKLCNHPSILYQSLTSKHGA 511
Query: 471 FENAMNILPT----GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
F + + L + +S++ I S KL V M+ ++ T++K+V+VSN+T+T
Sbjct: 512 FNSCESTLNATVLRAFPSSFEPNCSTIVDSGKLSVFVKMMVSLR-ETNEKVVVVSNFTKT 570
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSSKAGGCGLNLIGA 585
LD+ + K RLDGS+ +R ++V+ FN +S +F+LS+KAGG GLNLIGA
Sbjct: 571 LDMLSEVCKGIFCTVTRLDGSVVPHRRMQLVDEFNTSSLPNHVFLLSTKAGGVGLNLIGA 630
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
+RLV+FD DWNPA D QAMAR+WRDGQK PC +YR ++ G+I+EK++QRQ K L + V
Sbjct: 631 SRLVLFDSDWNPAFDVQAMARIWRDGQKMPCHIYRLVTAGTIDEKILQRQVMKSGLGT-V 689
Query: 646 VDCEEDVARHFSMSELRSLF 665
V+ + R F + L L
Sbjct: 690 VELDSLNERRFPLGRLLVLL 709
>gi|351708119|gb|EHB11038.1| DNA repair and recombination protein RAD54-like protein
[Heterocephalus glaber]
Length = 241
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/233 (61%), Positives = 184/233 (78%), Gaps = 5/233 (2%)
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
LKKLCNHP L+ DK DGFE A++I P GY+ S + +LS K++VLD +LAV
Sbjct: 12 LKKLCNHPALIHDKCVEEEDGFEGALDIFPPGYS----SKSIEPQLSGKMLVLDYILAVT 67
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF-NKTSNEFI 568
+ + DK+VLVSNYTQTLDLFE+L +++ Y YVRLDG+M+IKKRAKVVE F + +S +F+
Sbjct: 68 QSCSSDKVVLVSNYTQTLDLFEKLCQMQRYFYVRLDGTMSIKKRAKVVERFYSPSSPDFV 127
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
FMLSSKAGGCGLNL GANRLVMFDPDWNPAND+QAMA+VW DGQKK ++Y LS +I+
Sbjct: 128 FMLSSKAGGCGLNLTGANRLVMFDPDWNPANDEQAMAQVWCDGQKKTWYIYHLLSAETIK 187
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
EK+ Q Q+HKKAL SCVVD E+DV HFS+ +L+ LF L+E ++SDTHD+++C
Sbjct: 188 EKIFQWQSHKKALRSCVVDKEQDVEWHFSLGQLKELFILDEASLSDTHDRLQC 240
>gi|440640145|gb|ELR10064.1| hypothetical protein GMDG_04465 [Geomyces destructans 20631-21]
Length = 554
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 172/430 (40%), Positives = 251/430 (58%), Gaps = 19/430 (4%)
Query: 264 ILVISYETFRSHASVLHKNE-VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+L++ YE R A L + V LV+ DEGHRLK ++ QA+ GL ++++LSGTP+
Sbjct: 20 VLIVGYERMRGIAEELGQGAGVDLVIVDEGHRLKKETNKAAQAIKGLSTLKKIILSGTPL 79
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QNDL E+F +V F+N + +A F+K +ETPILR + AS+ ER R +L +
Sbjct: 80 QNDLTEFFVMVDFLNPDLFKSASSFKKNFETPILRSRQPNASERERELGEARQAELSEMT 139
Query: 383 NRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA---VRRTMKGGENTKL 439
+ ++RRT+ + + +LP KTE VV K T Q ++Y +++S A R K + L
Sbjct: 140 QQFILRRTAEVQAHFLPQKTEFVVFCKPTTAQAQIYEEILESPAFMGARNGYKAAQAQAL 199
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADG--FENAMNILPTGYAASYKSGKLLIELSA 497
G+ I L+K+CN P L++ + A E+A + + K+ L+ S
Sbjct: 200 GL-----INILRKVCNSPQLLLPSSKKSAAKRVGEDAEDAVEGISEERLKAP--LLATST 252
Query: 498 KLMVLDTMLAVIK---MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
K+ VLD +L I T +K+V+VSN+T TLDL ++ +RLDG +R
Sbjct: 253 KMRVLDGLLKAIAEDPHNTKEKVVIVSNFTATLDLLQKHLAQLSLPLLRLDGDTPTNRRQ 312
Query: 555 KVVETFNKTS--NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
+V FNKTS F +LS+KAGG GLNL+GA+RL++FD DWNPA D QAMARV R GQ
Sbjct: 313 DIVNEFNKTSARKNFALLLSAKAGGVGLNLVGASRLILFDVDWNPATDLQAMARVHRPGQ 372
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
+KP F+YR L G ++EK+ QRQ KK L+ +VD +++ A FS ELR LF L+ +
Sbjct: 373 EKPTFIYRLLMAGGMDEKIYQRQLTKKGLADSIVDNKKNGAV-FSADELRDLFTLDTTSD 431
Query: 673 SDTHDKIKCS 682
THD + C+
Sbjct: 432 CKTHDLLGCN 441
>gi|223992919|ref|XP_002286143.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
gi|220977458|gb|EED95784.1| rad54-like protein [Thalassiosira pseudonana CCMP1335]
Length = 549
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 180/539 (33%), Positives = 293/539 (54%), Gaps = 32/539 (5%)
Query: 143 LSNILRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL 200
+++ L P+QR G+++M+E CV A GC+ DEMGLGKT+Q + + +
Sbjct: 29 INDRLFPYQRIGLRWMWELYCVG------AGGCV-GDEMGLGKTVQVSSFLGAMA----- 76
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
A ID ++V P++++ +W +E+ W G R + G + + ++F T
Sbjct: 77 ANRFIDSVLVVCPATMLSHWLSELAVWAPGLRRIMVHRSGETDDYEEQGADAFCGT---- 132
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
+LV +YE+ R V + V+ DEG +++N +++ A+ L+ R+L+SG
Sbjct: 133 --GIVLVTTYESIRRSPDVYASFDWSYVVLDEGQKIRNPDAEVTLAVKRLRTPNRLLMSG 190
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TPIQNDL E +SL FV G LGT F ++ PI RG S AS + A L
Sbjct: 191 TPIQNDLRELWSLFDFVFPGRLGTLPAFEAEFAEPIKRGGYSNASPMQVQLAYRCAIVLR 250
Query: 380 GIVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
++N L+RR + + +P KTEQV+ +++ Q+ LY + ++SD V M+G
Sbjct: 251 DLINPYLLRRQKKDIKEVHRMPGKTEQVLFCRLSSKQRSLYEDYLRSDEVMGVMRGS--- 307
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
+ L ++T L+K+CNHPDLV+ D + + Y + +E+S
Sbjct: 308 ---VQLLKAVTVLRKICNHPDLVVGPDGRTLDSVQEESSSDNDDDGCFYGDERF-VEVSG 363
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
KL VL +L + + +L + +TL++ E+ ++ + +K+ RLDG+ + R K+V
Sbjct: 364 KLQVLAKILPLWH-KQGHRFILFCQWRKTLNIIEQFTRKQNWKFARLDGNTNVASRQKLV 422
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+ FN + F +++++ GG GLN+ GANR+V+FDPDWNP D QA R WR GQKK
Sbjct: 423 DKFNNDESYFCMLMTTRTGGVGLNVTGANRVVIFDPDWNPQTDAQARERAWRFGQKKDVT 482
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
VYR ++ G+IEEK+ QRQ K A+++ V+ + R FS +L+ LF L+ ++I T
Sbjct: 483 VYRLITAGTIEEKIYQRQIFKTAITNQVLQ-DPKQRRLFSQKDLKDLFTLKADSIDSTE 540
>gi|290973846|ref|XP_002669658.1| DEAD/DEAH box helicase [Naegleria gruberi]
gi|284083208|gb|EFC36914.1| DEAD/DEAH box helicase [Naegleria gruberi]
Length = 1029
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 176/497 (35%), Positives = 272/497 (54%), Gaps = 40/497 (8%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q T + L G L + +II+AP++++K W EI W
Sbjct: 311 GGILGDEMGLGKTVQITTFLAGLHFSG-----LFEPSIIIAPATVMKQWQEEINTWWPEL 365
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
RV + G+KA + S ++ P N +L+ +YE+ R + VL + G ++ D
Sbjct: 366 RVVIMHTSQGTKANFE----SLIEKVSSCP-NGVLITTYESLRIYQDVLTSKKWGYIILD 420
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGH+++N ++ A + R++L+GTPIQN+L E +SL F G LGT F Q
Sbjct: 421 EGHKIRNPDAALTLACKRFETPHRIILTGTPIQNNLKELWSLFDFCYPGKLGTLPVFLTQ 480
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+ PI +G S A+ + A + L ++ L+RR + LP K E V+ K+
Sbjct: 481 FSIPITQGGYSNATKFQVQTAYKCSCVLRDLIKPYLLRRMKKDVKHQLPEKKENVIFCKL 540
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
TD Q ++Y +KS V T+ G +IT+L+K+CNHPDL+ + +
Sbjct: 541 TDKQVKIYDEYLKSREVTGTLDGEH------LLFKAITNLRKVCNHPDLICTEKK----- 589
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
P + A KSGK+ MV++ +L++ K + +++L S + LD+F
Sbjct: 590 --------PDDFGAVEKSGKM--------MVVEKLLSLWK-EQNHRVLLFSQSKKMLDVF 632
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVM 590
E + R Y Y R+DG +K+R+ ++ FN F+F+L++K GG G+NLIGANR+++
Sbjct: 633 EPFLQERDYTYSRMDGDTPVKERSVLINQFNSDDKIFVFLLTTKVGGLGVNLIGANRIIL 692
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
FDPDWNP+ D QA+ R WR GQ K VYR +++G+IEEKM RQ K+ LS+ V+ +
Sbjct: 693 FDPDWNPSTDLQALERAWRLGQTKQVTVYRLMTSGTIEEKMYHRQIFKQFLSNKVLK-DP 751
Query: 651 DVARHFSMSELRSLFQL 667
R F ++L LF L
Sbjct: 752 RQKRFFKSNDLYELFTL 768
>gi|324502629|gb|ADY41155.1| DNA excision repair protein ERCC-6, partial [Ascaris suum]
Length = 1156
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 287/547 (52%), Gaps = 44/547 (8%)
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
V V N L +Q+ GV+++ E E G I+ADEMGLGKT+Q I + L
Sbjct: 257 VPNVCWNKLFKYQKTGVRWLSELH-----EQCVGGILADEMGLGKTIQVICFLRALAFSQ 311
Query: 199 PLAKPL----IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFM 253
+ + +++ P++L+ W E W R+A L G + + L+ F
Sbjct: 312 AETRGFGFRGLGPVLLICPTTLMHQWLKEFHNWFPLCRIAVLHSSGCFRGPQSHLLSKF- 370
Query: 254 QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
TY R L+ SY TF L V+ DEGH+++N +Q +A+ ++
Sbjct: 371 STY--RKDGCTLLTSYSTFTKKRKALANANWHYVILDEGHKIRNPGAQMTRAVKEVRTPH 428
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R++L+G+P+QN L E +SL+ FV G LG Q F +++ PI +G + AS + A +
Sbjct: 429 RLILTGSPLQNSLKELWSLMDFVYPGRLGALQTFTEKFAIPITQGGYANASAIQVRTAYK 488
Query: 374 RLEQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
L +N ++RR ++ LP KTEQV+ +T Q+ Y + I S R +
Sbjct: 489 CACVLRDAINPYILRRMKKDVEMTVQLPSKTEQVLFCNITPCQRTFYKDYISSRECARIL 548
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL---PTGYAASYKS 488
GG M A + +L+KLCNHPDLV TG N N+ + A+ +S
Sbjct: 549 AGG------MDAFVGLITLRKLCNHPDLV-----TGGPNKHNEYNVTLDEEMDFGAASRS 597
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLVSNYTQTLDLFERLSKLRGYKYVRLDG 546
GK+++ + A++K+ D K++L S Q L L E+ GY+Y+R+DG
Sbjct: 598 GKMIV-----------LKALLKLWKDQNQKVLLFSQSRQMLTLLEKFVIKEGYEYLRMDG 646
Query: 547 SMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
S I R +VE FN + F+F+L++K GG G+NL GANR+V+FDPDWNP+ D QA R
Sbjct: 647 STPIGSRQPLVEKFNTNEDIFLFLLTTKVGGLGVNLTGANRVVIFDPDWNPSTDVQARER 706
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
WR GQ++ VYR L++G+IEEK+ QRQ K+ L++ V+ + R F ++L LF
Sbjct: 707 AWRIGQERAVTVYRLLTSGTIEEKIYQRQIFKQFLANRVL-VDPKQRRFFKTNDLHELFT 765
Query: 667 L-EENTI 672
L +E TI
Sbjct: 766 LGDEKTI 772
>gi|221052138|ref|XP_002257645.1| DNA repair protein rad54 [Plasmodium knowlesi strain H]
gi|193807475|emb|CAQ37981.1| DNA repair protein rad54, putative [Plasmodium knowlesi strain H]
Length = 1052
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 159/408 (38%), Positives = 239/408 (58%), Gaps = 32/408 (7%)
Query: 68 RQILAKPFKVPILNYTGGG--YSTKALG--VRREG-----------ARKALHDPTAPNAL 112
+ L PFK P+ + Y K LG VRR G + A D N +
Sbjct: 39 KTTLFHPFKNPLPGFVSDKSLYVKKTLGAKVRRTGWINLTNCIPRRSEGAEPDEQKENEI 98
Query: 113 VLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYG 172
+ P L + KI+ VDP+L+ LR HQREGV F++EC+ +R E G
Sbjct: 99 KDFVPLILYEDENNKIE---------VDPILAQFLREHQREGVTFVFECLMNLRDEKISG 149
Query: 173 CIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRV 232
CI+AD+MGLGKTLQ I++++TLL+QG KP + + +I+ P+SL+ NW +EI KWL GR
Sbjct: 150 CILADDMGLGKTLQSISVLYTLLKQGINKKPAVRRCLILCPASLINNWNDEINKWLPGRC 209
Query: 233 AALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEG 292
++ +K +I +KL F Y + +++ SYE FR + L K+ + +++CDE
Sbjct: 210 NVTCVNDNAKEKILSKLEGFKYDYK----STVIICSYECFRINNESLDKSSIDMIICDEA 265
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
HRLKN +++TY ++ L A++R+LLSGTPIQNDL E+F+L+ N + FRK+Y
Sbjct: 266 HRLKNDKTKTYMSIYNLSARKRLLLSGTPIQNDLSEFFALISLCNPDLFDDTILFRKKYA 325
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PIL G+D A++ E+ A+ERL +L I N+ ++RRT+ LLSK LPVK + IK+
Sbjct: 326 NPILIGRDKDATEKEQQIASERLAELSTITNKFILRRTNNLLSKVLPVKYLINIFIKLNP 385
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
+Q+ LY +K +R +K ++T + L +I L+K+CNHP L+
Sbjct: 386 IQEALYMLFLKD---KRILKNDQSTN-RVNVLINIKKLEKICNHPLLL 429
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 148/242 (61%), Gaps = 6/242 (2%)
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
+S K +L +L IK T DK+V+VSNYTQTLD E L + YK+VRLDG + IKKR
Sbjct: 542 MSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCRENSYKFVRLDGGINIKKRH 601
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
KV+ F +++ FIF+LSSK+GGCG+NLI +NRLV+ DPDWNPAND QA+ARVWR+GQKK
Sbjct: 602 KVINDFTHSNDIFIFLLSSKSGGCGINLISSNRLVLLDPDWNPANDKQALARVWREGQKK 661
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
C++YRF TG+I+EK+ QRQ K LSS +V S ++ LF NT+ +
Sbjct: 662 ICYIYRFFCTGTIDEKVYQRQISKDGLSSMIVTNTNLCKDQLSDENVKKLFNYRMNTLCE 721
Query: 675 THDKIKCSRCV------NGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGV 728
THD I+C+RC + LE +D++ W H + D IL A
Sbjct: 722 THDNIECTRCTIKNCTEKNEENFSEQLEDFEEEDVNTWAHHQSVETVPDEILVKAVKAAT 781
Query: 729 SF 730
+
Sbjct: 782 DY 783
>gi|121714457|ref|XP_001274839.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL
1]
gi|119402993|gb|EAW13413.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus clavatus NRRL
1]
Length = 1221
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 282/543 (51%), Gaps = 60/543 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L P+I
Sbjct: 423 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQTIAFLAGLHYSKKLDGPII---- 473
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNK------LNSFMQTYGRRPVN 262
+V P++++K W NE +W RV+ L G I N+ L S +YG R +
Sbjct: 474 VVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMINIRNESSREDALLSQSYSYGSRALT 533
Query: 263 P-----------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+LV +Y +++A L E G + DEGH+++N +
Sbjct: 534 SNQKAARKVVKRVVEEGHVLVTTYSGIQTYAPFLIPVEWGCAILDEGHKIRNPNTSITIH 593
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ RV+LSGTP+QN+L E +SL FV LGT FR Q+E PI +G + AS+
Sbjct: 594 CKELRTPHRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASN 653
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
+ A + E L ++ L++R ++ LP KTEQV+ K+T Q+E Y ++S+
Sbjct: 654 LQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKSQREAYETFLRSE 713
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
++ +KG G + L+K+CNHPDL K+++ G+ N
Sbjct: 714 DMQSILKGRRQVLYG------VDILRKICNHPDLQNHKLESHQVGYGNGNR--------- 758
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRL 544
S K+ V+ ++L + + T K +L + + LD+ E+ + L G+ + R+
Sbjct: 759 ----------SGKMQVVKSLLELWR-DTGHKTLLFAQHRIMLDILEKFVNSLSGFNHRRM 807
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG+ I+ R +V+ FN N +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 808 DGTTPIQHRQAMVDEFNNDPNLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQAR 867
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ VYR ++ G+IEEK+ RQ K+ L++ ++ + F +S+L L
Sbjct: 868 ERAWRLGQKREVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDPKQRQTSFQLSDLYDL 927
Query: 665 FQL 667
F L
Sbjct: 928 FSL 930
>gi|320581583|gb|EFW95803.1| DNA dependent ATPase [Ogataea parapolymorpha DL-1]
Length = 1003
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 175/554 (31%), Positives = 290/554 (52%), Gaps = 78/554 (14%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+QR GV++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 263 YQRTGVQWLWELYS-----HKTGGIIGDEMGLGKTVQVISFLAGLHYSGKLTKPVL---- 313
Query: 210 IVAPSSLVKNWCNEITKWL----------------GGRV------------AALPIDGGS 241
+V P++++ WC E +W G RV ++LP DG +
Sbjct: 314 VVCPATVLSQWCKEFHRWWPALRVVILHSIGTGMTGKRVEDSDDDEEDADLSSLPSDGRA 373
Query: 242 KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
K +D+ +N+ +++ +Y R ++ L V+ DEGH+++N +S
Sbjct: 374 KELVDSVINN----------GHVIITTYVGVRIYSRYLLPVRWNYVVLDEGHKIRNPDSH 423
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
A LK R++LSGTPIQN+L+E +SL FV G LGT F+KQ+ PI G +
Sbjct: 424 VTLACKQLKTPNRIILSGTPIQNNLVELWSLFDFVFPGRLGTLPVFQKQFCVPINIGGYA 483
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
A++ + + L +++ L+RR A ++K LP K+E V+ K+TD+Q++LY +
Sbjct: 484 NATNVQVQTGYKCAVILRDLISPYLLRRVKADVAKDLPKKSEMVLFCKLTDVQRKLYEDF 543
Query: 422 IKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTG 481
+ S+ + + ++G N AL I L+K+CNHPDLV K++
Sbjct: 544 LNSEDINKILRGKRN------ALFGIDVLRKICNHPDLVDLKLR---------------- 581
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK- 540
++ + L + KL V+ +L V + K ++ + Q LD+ + + Y+
Sbjct: 582 -KKHQRTAEQLEARAGKLQVVHALLDVW-FSEGRKTLIFTQTRQMLDILQDFMEALNYET 639
Query: 541 -----YVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
++R+DG+ I +R +V+ FN +F+L+++ GG G+NL GA+R++++DPDW
Sbjct: 640 ESKFSFMRMDGTTPISQRQSMVDQFNTNPMYNVFLLTTRVGGLGVNLTGASRVIIYDPDW 699
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NP+ D QA R WR GQKK +YR + GSIEEK+ RQ K+ L++ ++ + R
Sbjct: 700 NPSTDVQARERAWRLGQKKDVVIYRLMMAGSIEEKIYHRQIFKQLLTNKILK-DPKQKRF 758
Query: 656 FSMSELRSLFQLEE 669
F M++L LF L E
Sbjct: 759 FKMNDLHELFTLAE 772
>gi|449296949|gb|EMC92968.1| hypothetical protein BAUCODRAFT_42604, partial [Baudoinia
compniacensis UAMH 10762]
Length = 1182
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 292/553 (52%), Gaps = 63/553 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + +L L KP+I
Sbjct: 377 YQKTGVQWLWELYS-----QQVGGIIGDEMGLGKTIQIISFLASLHYSDKLTKPII---- 427
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS------KAEIDNKLNSFMQTYGRRPV- 261
+V P++++K W NE +W RV+ L G +A I++ L M YGR+
Sbjct: 428 VVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDIKREARIEDDLEVDM--YGRKKAT 485
Query: 262 ------------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y +++A +L + + DEGH+++N +
Sbjct: 486 MNKGHKAAKRIVDRVVRDGHVLVTTYSGLQTYAELLIPTDWEYAVLDEGHKIRNPNTAIT 545
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ RV+LSGTP+QN+L E +SL FV LGT FR Q+E PI +G + A
Sbjct: 546 IYCKELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRSQFEIPIKQGGYANA 605
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+E+V+ K+T LQ+E Y +
Sbjct: 606 SNLQVETAMKCAETLKDTISPYLLQRFKVDVAADLPKKSERVLFCKLTKLQREAYEWFLA 665
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S+ ++ + G AL + L+K+CNHPDLV K + G+ Y
Sbjct: 666 SEEMKSILSGKRQ------ALYGVDILRKICNHPDLVEHKTLSKKAGYN---------YG 710
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYV 542
+ +KSGK+ V+ +L + K K +L + + LD+ E + + G+ Y
Sbjct: 711 SGHKSGKM--------QVVKALLEIWKRDGH-KTLLFAQHRIMLDILETFIQGMDGFNYR 761
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ +IK R +V+ FNK + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 762 RMDGNTSIKDRQDLVDEFNKDQDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQ 821
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F + +L
Sbjct: 822 ARERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPRQRQTFQLRDLH 880
Query: 663 SLFQLEENTISDT 675
LF L E+ +T
Sbjct: 881 DLFTLGESRDGET 893
>gi|70982085|ref|XP_746571.1| DNA repair protein Rhp26/Rad26 [Aspergillus fumigatus Af293]
gi|66844194|gb|EAL84533.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
Af293]
gi|159122195|gb|EDP47317.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus fumigatus
A1163]
Length = 1214
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 286/550 (52%), Gaps = 60/550 (10%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L+ L +Q+ GV++++E + G I+ DEMGLGKT+Q I + L L +
Sbjct: 416 LNPYLFDYQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQAIAFLAGLHYSKKLDR 470
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNS----FMQTY- 256
P+I +V P++++K W NE +W RV+ L G I ++ + QTY
Sbjct: 471 PVI----VVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRSESSREDALLSQTYS 526
Query: 257 ------------GRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
R+ V +LV +Y ++++ L E G + DEGH+++N
Sbjct: 527 SNSRGITSNQKAARKVVKRVVEEGHVLVTTYSGLQTYSHFLIPVEWGCAILDEGHKIRNP 586
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+ L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI +G
Sbjct: 587 NTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQG 646
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ AS+ + A + E L ++ L++R ++ LP KTEQV+ K+T Q+ Y
Sbjct: 647 GYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKPQRMAY 706
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
+ +KS+ + +KG G + L+K+CNHPDL K+Q+ G+ NA
Sbjct: 707 ESFLKSEEMESILKGRRQILYG------VDILRKICNHPDLQNHKMQSHQSGYGNANK-- 758
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LR 537
S K+ V+ ++L + + T K +L + + LD+ E+ + L
Sbjct: 759 -----------------SGKMQVVKSLLELWR-DTGHKTLLFAQHRIMLDILEKFVRSLS 800
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
G+ Y R+DG+ I+ R +V+ FN N +F+L++K GG G+NL GA+R++++DPDWNP
Sbjct: 801 GFNYRRMDGTTPIQNRQTMVDEFNNDPNIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 860
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFS 657
+ D QA R WR GQK+ VYR ++ G+IEEK+ RQ K+ L++ ++ + F
Sbjct: 861 STDVQARERAWRLGQKRDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTSFQ 920
Query: 658 MSELRSLFQL 667
+S+L LF L
Sbjct: 921 LSDLYDLFAL 930
>gi|425777849|gb|EKV16005.1| DNA repair protein Rhp26/Rad26, putative [Penicillium digitatum
PHI26]
gi|425782618|gb|EKV20517.1| DNA repair protein Rhp26/Rad26, putative [Penicillium digitatum
Pd1]
Length = 1117
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 181/562 (32%), Positives = 298/562 (53%), Gaps = 67/562 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+S L P+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L L K
Sbjct: 328 ISRFLFPYQKIGVQWLWELH-----QQTVGGIIGDEMGLGKTIQAISYLAALHHSKKLTK 382
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG------GSKAEIDNKLNSFM-- 253
P AIIV P++L+K W NE +W RV+ L G G ++ +N L+S M
Sbjct: 383 P----AIIVCPATLMKQWVNEFHRWWPPFRVSILHSSGSGMINLGKESSRENALSSEMMG 438
Query: 254 ----------QTYGRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
Q +R + +LV +Y +S+A L E G + DEGH+++N
Sbjct: 439 SRNSRQLSAGQKADKRIIKRVTEEGHVLVTTYSGLQSYADALVDVEWGCAILDEGHKIRN 498
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
++ + L+ R++LSGTP+QN L++ +SL FV LG F+ Q+E PI +
Sbjct: 499 PDAGITFSCKELRTPHRIILSGTPMQNSLVDLWSLFDFVFPMRLGNLVTFKNQFEIPIRQ 558
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS+ + A + E L ++ L++R A ++ LP+K+EQV+ K+T LQ+ +
Sbjct: 559 GGYASASNLQVQTAAKCAETLKDAISPYLLQRFKADVTSDLPMKSEQVIFCKLTQLQRTI 618
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + SD ++ ++G N+ G I L+K+ NHPDL ++A+
Sbjct: 619 YKRFLGSDDMKSIVRGKRNSLFG------IDILRKISNHPDLA-----------DHALRS 661
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKL 536
Y + +SG K+ VL +L V + T K ++ + LD+ E+ L L
Sbjct: 662 READYGDAERSG--------KMKVLKGLLEVWR-DTGHKTLVFTQGRLMLDIIEKFLGVL 712
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
G+ R+DG+ IK+R +V+ FN +F+L+++ GG G+NL GA+R++++DPDWN
Sbjct: 713 GGFNSRRMDGTTPIKERQNLVDEFNNNPEIHVFLLTTRVGGIGVNLTGADRVIIYDPDWN 772
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
P+ D QA R WR GQK+ ++R ++ G+IEEK+ RQ K+ L++ + + F
Sbjct: 773 PSTDLQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKIT-RDPHQREGF 831
Query: 657 SMSELRSLFQLEENTISDTHDK 678
+S+L LF T++D +D+
Sbjct: 832 QLSDLYDLF-----TLTDENDE 848
>gi|295662396|ref|XP_002791752.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226279878|gb|EEH35444.1| DNA repair and recombination protein RAD26 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 1234
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 178/557 (31%), Positives = 292/557 (52%), Gaps = 60/557 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L KP+ I
Sbjct: 426 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLTKPI----I 476
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPVNP--- 263
+V P +++K W NE +W RV+ L G + ++ ++ +++ P P
Sbjct: 477 VVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRRESYADARLESQIWDPNQPRKA 536
Query: 264 -------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+LV +Y ++++S+L E G + DEGH+++N ++
Sbjct: 537 TKEQKAAKKILDRVLAKGHVLVTTYSGLQTYSSLLIPVEWGCSILDEGHKIRNPDTAITI 596
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI +G + AS
Sbjct: 597 HCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANAS 656
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S
Sbjct: 657 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKIQRSAYQAFLGS 716
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K + G+ Y +
Sbjct: 717 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKTLSTKPGY---------NYGS 761
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
+ KSG K+ V+ +L + K T K +L + + LD+ ER K + G+KY R
Sbjct: 762 AAKSG--------KMQVVKALLELWK-ETGHKSLLFAQHRIMLDILERFIKSMTGFKYQR 812
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN IF+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 813 MDGNTPIKLRQSLVDEFNNNPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 872
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 873 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILR-DPKQRQTFHMSDLHD 931
Query: 664 LFQLEENTISDTHDKIK 680
LF L + ++T + K
Sbjct: 932 LFTLGNDGPTETSELFK 948
>gi|429860233|gb|ELA34975.1| DNA repair protein rhp26 [Colletotrichum gloeosporioides Nara gc5]
Length = 1143
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 179/536 (33%), Positives = 285/536 (53%), Gaps = 50/536 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GV ++ E E G I+ DEMGLGKT+Q I ++ L L KP+I
Sbjct: 387 LFAYQKTGVHWLAELY-----EQGVGGIIGDEMGLGKTVQAIAMVAALHYSKKLDKPVI- 440
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS-------KAEIDNKLNSFMQTYGR 258
+V P++++K W NE +W RV+ L G +++D+ S + R
Sbjct: 441 ---VVVPATVMKQWVNEFHRWWPPLRVSILHSSGSGMMNQHEDDSDLDDGGESTNRVAAR 497
Query: 259 RPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R VN +LV +Y +S+ L ++ G + DEGH+++N ++ A L
Sbjct: 498 RIVNRVVKHGHVLVTTYAGLQSYNEELLQHSWGYAILDEGHKIRNPNAEITVACKHLNTV 557
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTPIQN+L E +SL F+ LGT FR Q+E PI +G + A++ + A
Sbjct: 558 NRVILSGTPIQNNLTELWSLFDFIFPMRLGTLVSFRTQFELPIKQGGYANATNLQVMTAE 617
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ L +++ L++R ++ LP KTEQV+ K+T Q YT I SDAV
Sbjct: 618 KCATTLKETISQYLLQRLKIDVASDLPEKTEQVLFCKLTQSQLTAYTRFISSDAV----- 672
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
GE AL I L+K+CNHPDL+ D+++ A + KSGK+
Sbjct: 673 -GEIMTRKRKALYGIDILRKICNHPDLLDDRLKRDA----------KYDWGDPAKSGKM- 720
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDGSMTIK 551
+++ +L + K K +L S L++ E+ + ++ G YVR+DG I+
Sbjct: 721 -------QMVNELLPMWKRFGH-KTLLFSQTKLMLNILEKFIRRMDGVSYVRMDGDTPIE 772
Query: 552 KRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
+R +++ FN + +F+L+++ GG G+NL GA R++++DPDWNP+ D QA R WR G
Sbjct: 773 QRQALIDRFNHDPSIDVFLLTTRTGGLGINLTGATRIIIYDPDWNPSTDMQARERAWRLG 832
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
Q KP +YR +++G+IEEK+ RQ K+ +++ V+ + A +F +S+L LF
Sbjct: 833 QTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRA-NFDLSDLYDLFSF 887
>gi|226289757|gb|EEH45241.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb18]
Length = 1236
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 295/557 (52%), Gaps = 60/557 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L KP+ I
Sbjct: 426 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLTKPI----I 476
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G S++ D +L S +
Sbjct: 477 VVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRSESYADARLESQIWDPDQPRRA 536
Query: 254 ---QTYGRRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q ++ ++ +LV +Y ++++S+L + G + DEGH+++N ++
Sbjct: 537 TKEQKAAKKILDRVLAKGHVLVTTYSGLQTYSSLLIPVDWGCSILDEGHKIRNPDTAITI 596
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI +G + AS
Sbjct: 597 HCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANAS 656
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S
Sbjct: 657 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKIQRSAYQAFLGS 716
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K + G+ Y +
Sbjct: 717 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKTLSTKPGY---------NYGS 761
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
+ KSG K+ V+ +L + K T K +L + + LD+ ER K + G+KY R
Sbjct: 762 AAKSG--------KMQVVKALLELWK-ETGHKSLLFAQHRIMLDILERFIKSMTGFKYQR 812
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN IF+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 813 MDGNTPIKLRQSLVDEFNNNPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 872
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 873 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILR-DPKQRQTFQMSDLHD 931
Query: 664 LFQLEENTISDTHDKIK 680
LF L + ++T + K
Sbjct: 932 LFTLGNDGPTETSELFK 948
>gi|225682364|gb|EEH20648.1| DNA repair and recombination protein RAD26 [Paracoccidioides
brasiliensis Pb03]
Length = 1236
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 295/557 (52%), Gaps = 60/557 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L KP+ I
Sbjct: 426 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLTKPI----I 476
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G S++ D +L S +
Sbjct: 477 VVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMINLRSESYADARLESQIWDPDQPRRA 536
Query: 254 ---QTYGRRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q ++ ++ +LV +Y ++++S+L + G + DEGH+++N ++
Sbjct: 537 TKEQKAAKKILDRVLAKGHVLVTTYSGLQTYSSLLIPVDWGCSILDEGHKIRNPDTAITI 596
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI +G + AS
Sbjct: 597 HCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANAS 656
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S
Sbjct: 657 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKIQRSAYQAFLGS 716
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K + G+ Y +
Sbjct: 717 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKTLSTKPGY---------NYGS 761
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
+ KSG K+ V+ +L + K T K +L + + LD+ ER K + G+KY R
Sbjct: 762 AAKSG--------KMQVVKALLELWK-ETGHKSLLFAQHRIMLDILERFIKSMTGFKYQR 812
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN IF+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 813 MDGNTPIKLRQSLVDEFNNNPEIHIFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 872
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 873 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILR-DPKQRQTFQMSDLHD 931
Query: 664 LFQLEENTISDTHDKIK 680
LF L + ++T + K
Sbjct: 932 LFTLGNDGPTETSELFK 948
>gi|242018945|ref|XP_002429929.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514975|gb|EEB17191.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1234
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 200/587 (34%), Positives = 303/587 (51%), Gaps = 74/587 (12%)
Query: 125 LLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE-CVTGV-RIED--AYGCIMADEMG 180
+L D + + +VVD L L+PHQREGVKFM++ C + R+E+ GCI+A MG
Sbjct: 547 VLDFDPETREELLVVDENLVCNLKPHQREGVKFMWDSCFESLKRMEEDSGSGCILAHCMG 606
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG---RVAALPI 237
LGKTLQ ITL TLL + ++ I+ P S V+NW E WL R+ +
Sbjct: 607 LGKTLQVITLSHTLLTNNTGVQSIL----ILCPLSTVQNWVKEFYYWLKKCKKRIKIFEV 662
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG------------ 285
++ K + G +L++SY FR + KNE
Sbjct: 663 VTCKTKKLKIKKIKSWKENG-----GVLIMSYNGFRLMTNN-KKNENSKYLTAFLNPGPD 716
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
LV+CDEGH LKN +S + LK RR++L+GTP+QN+L+EYF +V FV ILGT +
Sbjct: 717 LVVCDEGHLLKNEKSCLALCVSQLKTLRRIVLTGTPLQNNLIEYFCMVEFVKPSILGTKR 776
Query: 346 EFRKQYETPILRGQ--DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
EF + PI GQ DS SD K R L +V + R +L LP K E
Sbjct: 777 EFMNGFVNPIKNGQFEDSTQSDVRIMK--RRAHVLHSLVEGFIQRFGYYVLKSLLPEKQE 834
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
V+ I +T+ Q+ELY +K+ A EN L ++ + L+K+ HP +
Sbjct: 835 YVIKICLTETQEELYRTFVKNYA-----NFSENKSL----FNTFSWLQKIWTHPRVFHHA 885
Query: 464 IQTGADGFENAMNILPTGYAASYKS-GKLL-------IELSAKLMVLDTMLAVIKMTTDD 515
+ T ++ + + +A ++ K+L I S KL++L +L + D
Sbjct: 886 LDTVSNDVDKT-----SQFAMAFADCNKILKEEEFTEIRASGKLVLLFQILKICHQ-AGD 939
Query: 516 KIVLVSNYTQTLDLFERLSKL---------------RGYKYVRLDGSMTIKKRAKVVETF 560
K+++ S Y TL+L E + G Y R+DG+ + R + F
Sbjct: 940 KLLVFSQYLTTLNLIEYFLRFVNDNNNKNDECNTWVTGVDYYRIDGTTNSQSRFDYCKKF 999
Query: 561 NKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
N +N+ + ++S++AGG G+NL+ ANR+++FD WNP++D Q++ RV+R GQ+K C++
Sbjct: 1000 NDKNNKRLRLLLISTRAGGLGINLVSANRVIIFDVSWNPSHDLQSIFRVYRFGQRKTCYI 1059
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
YRFLS ++EEK+ QRQ K +L+ ++D E + RHFSM L+ LF
Sbjct: 1060 YRFLSEATMEEKIYQRQVTKLSLAHRIID-EHQIERHFSMVNLQELF 1105
>gi|440640373|gb|ELR10292.1| hypothetical protein GMDG_04676 [Geomyces destructans 20631-21]
Length = 1241
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 299/573 (52%), Gaps = 62/573 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GV+++ E G I+ DEMGLGKT+Q ++ + L L KP+I
Sbjct: 427 LYDYQKTGVQWLGELYAS-----QVGGIVGDEMGLGKTIQVVSFIAALHFSKQLNKPVI- 480
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS------KAEIDNKLNSFMQTYG-- 257
+VAP+++++ W NE +W RV+ L G + ++++ +T G
Sbjct: 481 ---VVAPATVLQQWVNEFHRWWPALRVSILHTSGSGMLNVRQEGRVEDEEEDITRTRGGK 537
Query: 258 ---------RRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
+R V+ +LV +Y +++ +L E G + DEGH+++N +
Sbjct: 538 KEPKAKKAAKRIVDRVIKQGHVLVTTYAGLQTYGDLLVPVEWGYAVLDEGHKIRNPNTTV 597
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
L+ R++LSGTP+QN+L+E +SL F+ LGT FR Q+E PI G +
Sbjct: 598 TIYCKELQTPNRIILSGTPLQNNLIELWSLFDFIYPMRLGTLVNFRNQFEIPIKLGGYAN 657
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI 422
A++ + A + E L ++ LI+R A ++ LP KTEQV+ K+T Q++ Y +
Sbjct: 658 ATNLQILTATKCAETLKEVIGPYLIQRLKADVASDLPKKTEQVLFCKLTKPQRQAYEEFL 717
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY 482
KS+ + + T+ +L I L+K+CNHPDL+ +++
Sbjct: 718 KSEEMVSILN---RTR---QSLYGIDILRKVCNHPDLLEPRLRN---------------- 755
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKY 541
A YK G S K+ V+ ++ + K DKI+L S Q L++ E K L G+ Y
Sbjct: 756 RAGYKWGN--ANKSGKMQVVKALIMMWK-AKGDKILLFSQGVQMLNIIEEFVKSLGGFTY 812
Query: 542 VRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
+R+DG IK+R +V FN+ IF+L++K GG G+NL GANR+++FDPDWNP+ D
Sbjct: 813 LRMDGGTPIKERQTMVTNFNENPGINIFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDV 872
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA R WR GQKK +YR +S G+IEEK+ RQ K+ L+ ++ + + F M +L
Sbjct: 873 QARERAWRLGQKKEVTIYRLMSAGTIEEKIYHRQIFKQFLADKILK-DPKQRQTFHMKDL 931
Query: 662 RSLFQL--EENTISDTHDKIKCSRCVNGIQVKP 692
LF L E++ ++T + K + +V+P
Sbjct: 932 YDLFTLGSSEDSTTETGEIFKGTEVKFKREVEP 964
>gi|344274673|ref|XP_003409139.1| PREDICTED: DNA excision repair protein ERCC-6 [Loxodonta africana]
Length = 1501
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 276/526 (52%), Gaps = 36/526 (6%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 514 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 568
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP 263
+ +IV P++++ W E W A+ D GS KL + Y +
Sbjct: 569 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRDIARY-----HG 623
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+Q
Sbjct: 624 ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQ 683
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
N+L E +SL FV G LGT F +Q+ PI G S AS + A + L +N
Sbjct: 684 NNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTIN 743
Query: 384 RCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
L+RR + +S LP K EQV+ ++TD Q E+Y N I S V R + G M
Sbjct: 744 PYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFIDSKEVYRILNGE------M 797
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
S + +L+K+CNHPDL G + LP G + + G + S K++V
Sbjct: 798 QIFSGLVALRKICNHPDLF--------SGGPRHLTGLPDGESEEDQFG--YWKRSGKMIV 847
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
++++L I +++L S Q LD+ E + R Y Y+++DG+ TI R ++ +N
Sbjct: 848 VESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRARKYSYLKMDGTTTIASRQPLITRYN 906
Query: 562 KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 907 EDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYRL 966
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 967 LTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1011
>gi|344232266|gb|EGV64145.1| hypothetical protein CANTEDRAFT_122352 [Candida tenuis ATCC 10573]
Length = 1010
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 189/582 (32%), Positives = 300/582 (51%), Gaps = 77/582 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 265 LFDYQKTCVQWLWELYN-----QKTGGIIGDEMGLGKTIQVISFIAGLHYSGLLEKPVL- 318
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGR--VAALPIDGGSKAEID-NKLNSFMQ--------- 254
IV P++++ W NE KW V I G +ID NKL F+Q
Sbjct: 319 ---IVVPATVLNQWVNEFHKWWPALRCVILHSIGSGMGQKIDENKLEQFLQQEEGATGKV 375
Query: 255 -------TYGRRPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
++ VN + L+ +Y R ++ L G + DEGH+++N S+
Sbjct: 376 FKGVRTQINAQQVVNSVMESGHVLITTYVGLRIYSKHLLTKSWGYCVLDEGHKIRNPNSE 435
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
+K R++LSGTPIQN+L+E +SL FV G LGT F +Q+ PI G +
Sbjct: 436 ISLLCKRVKTANRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFEQQFSLPINMGGYA 495
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
AS+ + + + L +++ L+RR +++ LP K E V+ +K+T Q+++Y +
Sbjct: 496 NASNLQVQTSYKCATILRDLISPYLLRRLKHDVARDLPKKEEMVLFVKLTHYQQQMYESF 555
Query: 422 IKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTG 481
++S+ +R MKG N +G + L+K+CNHPDLV G E+
Sbjct: 556 LESEDLRAIMKGKRNMLMG------VDVLRKICNHPDLV-----NGNKSSED-------- 596
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER----LSKLR 537
Y S +SGK+ E++ KL+ L + + K+++ Q LD+ ER ++K+
Sbjct: 597 YGNSKRSGKM--EVTRKLIQLWAL-------HNHKMLIFCQTRQMLDILERFLHRITKID 647
Query: 538 G--------YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
G ++Y+R+DG+ I KR +V+ FN +F+L++K GG G+NL GA+R++
Sbjct: 648 GNNMETGEPFEYLRMDGTTPIGKRQYLVDRFNTDPKISVFLLTTKVGGLGINLTGADRII 707
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
++DPDWNP+ D QA R WR GQK+ +YR + TGSIEEK+ RQ K L++ ++ +
Sbjct: 708 IYDPDWNPSTDMQARERAWRLGQKRDIVIYRLMITGSIEEKIYHRQIFKTFLTNKILK-D 766
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVK 691
R F M++L LF L + D+ SR V Q K
Sbjct: 767 PKQRRFFKMNDLHDLFSLGDQ--DDSEQTSNSSRSVIKKQAK 806
>gi|326434134|gb|EGD79704.1| hypothetical protein PTSG_10689 [Salpingoeca sp. ATCC 50818]
Length = 1641
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 281/542 (51%), Gaps = 44/542 (8%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ V L + L P+Q E V+++ T G ++ DEMGLGKT+Q I + L+
Sbjct: 671 IYVPGFLWSKLYPYQHECVRWLASLQT-----SGVGGVLGDEMGLGKTIQVIAFLAGLMY 725
Query: 197 QGP-------LAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNK 248
P + + ++V P+++V +W E +W RV L G +
Sbjct: 726 GTPTTSVRRHVRRSSNGAILVVCPATVVHHWVREFHRWWAPFRVCVLHSSGNYEGR---- 781
Query: 249 LNSFMQTYGRRPVNPILVISYETFRS-HASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
S ++ R +L+ +Y T R+ H +L ++ + DEGH+++N ++Q
Sbjct: 782 -ESLVRRIARGGAGHVLITTYSTLRTAHTDILVRHRWHYAVLDEGHKIRNPDAQVTIIAK 840
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
LK + R+LL+GTPIQN+L E +SL FV+ G LG F ++ TP++ G + A++ +
Sbjct: 841 QLKTEHRLLLTGTPIQNNLKELWSLFDFVHPGRLGQLPTFTNEFITPMMVGSYANATEKQ 900
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSD 425
A L + C++ R+ A + LP + EQ++ K+TD Q+ LY + + S
Sbjct: 901 VHAAYRCACVLRDTIRPCMLHRSKADVQAQISLPPRNEQILFCKLTDDQRALYEHFLASR 960
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
V ++G +TA I L+K+CNHPDL + AD P Y S
Sbjct: 961 DVGEILRGE------LTAFHGIDLLRKICNHPDLA----PSLAD---------PPDY--S 999
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
S L E S K++VL +L I +++L Q L++ E K Y Y+RLD
Sbjct: 1000 DPSVPLPWERSGKMIVLRQLLR-IWFQKQHRVLLFCQTRQMLNMLESFIKYEHYTYLRLD 1058
Query: 546 GSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
G++++K+R ++ FN FIF+L+++ GG GLNL GA+R+++FDPDWNP+ D QA
Sbjct: 1059 GTVSVKQRQPLIRYFNDNPEVFIFILTTRTGGLGLNLTGADRVIIFDPDWNPSVDVQAKE 1118
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R WR GQ+KP +YR L+ G+IEEK+ RQ K+ L+ V+ + R F S+L LF
Sbjct: 1119 RAWRIGQQKPVTIYRLLTAGTIEEKIYHRQVFKQLLTFKVMK-DPKQRRFFKSSDLHELF 1177
Query: 666 QL 667
L
Sbjct: 1178 VL 1179
>gi|340376710|ref|XP_003386875.1| PREDICTED: DNA repair protein rhp26-like [Amphimedon queenslandica]
Length = 1230
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 282/529 (53%), Gaps = 48/529 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL----LRQGPLAK 202
L +Q+ GVK+++E + G IM DEMGLGKT++ I + L +R +
Sbjct: 357 LYRYQQTGVKWLWELHS-----QQAGGIMGDEMGLGKTIEMIGFLAGLKISNVRSHVTRE 411
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID----GGSKAEIDNKLNSFMQTYGR 258
+ ++V P++++ W +E W A+ D GGSKA + ++ S
Sbjct: 412 LGLGPILVVCPATVLHQWVHEFHSWYPPFRVAILHDTGSYGGSKASLLKRMVS------- 464
Query: 259 RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
N ++V +Y + R +L +++ V+ DEGH+++N ++ A R++LS
Sbjct: 465 --ANGVIVTTYASVRLQTDLLLRHQWEYVILDEGHKIRNPDADITLACKQFPTPHRIILS 522
Query: 319 GTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
G+P+QN+L E +SL FV G LGT F +Q+ PI G + AS + A L
Sbjct: 523 GSPVQNNLKELWSLFDFVYPGKLGTLPVFLEQFSVPITLGGYAHASQTQVETAYRCACIL 582
Query: 379 IGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTK 438
+N L+RR + + LP K EQV+ ++TD Q+ELY IK V M+GG+
Sbjct: 583 RDTINPYLLRRLKSDVKLQLPNKNEQVLFCRLTDYQRELYEEYIKGPEVEAMMRGGKQI- 641
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAK 498
S + +L+KLCNHPDLV ++ D E + Y +SGK++
Sbjct: 642 -----FSGLMTLRKLCNHPDLVAGGVR---DSEEES-------YGFWRRSGKMI------ 680
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
V++++L + + KI+L S Q L + E+ Y Y+R+DG+ +I R K+++
Sbjct: 681 --VIESLLKMW-LGQKHKILLFSQSRQMLYILEKFLISNSYTYLRMDGTTSIGARQKLIK 737
Query: 559 TFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
FN+ + F+F+L+++ GG G+NL GA+R++++DPDWNP+ D QA R WR GQ KP +
Sbjct: 738 DFNEDPSIFVFLLTTRVGGLGVNLTGADRVLIYDPDWNPSTDTQARERAWRIGQTKPVTI 797
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
YR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 798 YRLLTGGTIEEKVYHRQIFKQFLTNRVLR-DPRQRRFFKSNDLYELFTL 845
>gi|268534396|ref|XP_002632329.1| Hypothetical protein CBG00336 [Caenorhabditis briggsae]
Length = 753
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 188/564 (33%), Positives = 286/564 (50%), Gaps = 85/564 (15%)
Query: 141 PVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLL----- 195
P + LR HQ+EG+KF+++ + ++G GK T+
Sbjct: 122 PRFARHLRDHQKEGIKFIFDRL---------------KVGEGKKKWAERFWQTIWDWEKV 166
Query: 196 --RQGPLAKPLIDKA---IIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
R P +K + A +I+ PSSLV NW +E KW R+ P A
Sbjct: 167 YKRWQPRSKTVSQIAQSCLIIVPSSLVNNWKSEFEKWW--RLMRFPAVIALTAMDIKSYQ 224
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ ++T P LVISY+ + H L +++CDEGH+LKN + + + L+ L+
Sbjct: 225 TTIKTM------PYLVISYDLAQRHVEKLRACRFDVMVCDEGHKLKNLDGRLRKTLLSLE 278
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
RR++L+GTP+QND E++S+++FV + FR
Sbjct: 279 IPRRLILTGTPMQNDFDEFYSILNFVCPAKFDSLPRFR--------------------LM 318
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
N+ +EQL I++ C++RRT+A + LP E ++ + +QK +++ +
Sbjct: 319 CNDDVEQLNEIIDECMLRRTAAGIPFSLP--DEYILFCAASRIQKAIHSEICD------Y 370
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-----QTGADGFENAMNILPTGYAAS 485
M G LS I ++L NHP L++D + +TG + A T +
Sbjct: 371 MTGD--------PLSLIFFARQLANHPKLLLDNLREKNSKTGEKSLKQAQK--HTALLLA 420
Query: 486 YKSGKL---LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
+ + + S KL L ML +M + +V VSNY +TLD+ E+L ++
Sbjct: 421 FDGPNMPRGAAKESGKLYALADMLKCFRMLQECTVV-VSNYIETLDMIEQLCAYLEFRVF 479
Query: 543 RLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
RLDG ++ R K+V FN + IF+LS+KAGG GLNLIGA+RLV+FD DWNPAND
Sbjct: 480 RLDGKTQVQDRQKLVRNFNDQRDPSNIFLLSTKAGGVGLNLIGASRLVLFDSDWNPANDQ 539
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE--DVARHFSMS 659
QAMAR+WRDGQ +PC +YR ++TG+IEEKM+QRQ K L CV+D E D F+
Sbjct: 540 QAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKKTGL-GCVIDAIEVGDTVSTFTDE 598
Query: 660 ELRSLFQLE-ENTISDTHDKIKCS 682
+L+ +F ++T +THD CS
Sbjct: 599 DLKDIFTFTGDDTECNTHDLCDCS 622
>gi|115387749|ref|XP_001211380.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624]
gi|114195464|gb|EAU37164.1| hypothetical protein ATEG_02202 [Aspergillus terreus NIH2624]
Length = 1192
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 179/542 (33%), Positives = 281/542 (51%), Gaps = 58/542 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEI-TKWLGG 230
G I+ DEMGLGKT+Q I + L L KP AI+V P++++K W E T W
Sbjct: 413 GGIIGDEMGLGKTIQVIAFLAGLHYSKKLTKP----AIVVCPATVMKQWVTEFHTWWPAF 468
Query: 231 RVAALPIDGGSKAEI---------------DNKLNSFMQTYGRRPV------NPILVISY 269
RV+ L G I D++ +S GRR V +LV +Y
Sbjct: 469 RVSILHTSGSGMVNIRNESRREEALLSQTWDSRASSSGLKAGRRVVKRVVEEGHVLVTTY 528
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
S+AS+L E G + DEGH+++N + L+ R++LSGTP+QN+L E
Sbjct: 529 SGLLSYASLLIPVEWGCAILDEGHKIRNPNTAITIHAKELRTPHRIILSGTPMQNNLTEL 588
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
+SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L++R
Sbjct: 589 WSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQR 648
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LP K+EQV+ ++T LQ++ Y + S ++ ++G AL I
Sbjct: 649 FKIDVAADLPKKSEQVLFCRLTKLQRQSYKAFLASQEMQSILRGRRQ------ALYGIDI 702
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
L+K+CNHPDL K + + A+Y E S K+ V+ ++L +
Sbjct: 703 LRKICNHPDLQSHKF---------------SAHKAAYGGA----EKSGKMQVVRSLLELW 743
Query: 510 KMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
+ T K +L + + LD+ E+ + L G Y R+DG+ I +R +V+ FNK + +
Sbjct: 744 R-DTGHKTLLFAQHRIMLDILEKFVNSLSGINYRRMDGTTPIAQRQSMVDEFNKDPSLHL 802
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ +YR ++ G+IE
Sbjct: 803 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDMQARERAWRLGQKREVTIYRLMTAGTIE 862
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGI 688
EK+ RQ K+ L++ ++ + + F MS+L LF L + D H + S+ N
Sbjct: 863 EKIYHRQVFKQFLTNKIL-RDPKQRQTFQMSDLHDLFSLGD----DEHGPTETSKIFNNA 917
Query: 689 QV 690
+
Sbjct: 918 DI 919
>gi|328772759|gb|EGF82797.1| hypothetical protein BATDEDRAFT_9561, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 912
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 179/567 (31%), Positives = 294/567 (51%), Gaps = 86/567 (15%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM----WTLLRQGPLAK 202
L P+QR VK+++E G ++ DEMGLGKT+Q I+ + ++ L +GP+
Sbjct: 245 LFPYQRTCVKWLWELYC-----QEVGGLVGDEMGLGKTIQIISFLAGLGFSRLLKGPV-- 297
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG---GSKAEIDNKLNSFMQTYGR 258
IIV P+++++ W E KW RVA L G GS+A + +++M
Sbjct: 298 ------IIVCPATVLRQWVQEFHKWWPPFRVAILHSTGSGLGSEAHDRDSESTYMSDESE 351
Query: 259 R----------------------PVNP----------------ILVISYETFRSHASVLH 280
P+ +LV +Y R HA +L
Sbjct: 352 ENEYFLDKKRPKKKGKRSDTLHYPIKSKSKARALVANIVKNGHVLVTTYAAIRIHADILL 411
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
+ + DEGH+++N +S+ A K R++LSGTPIQN+L+E +S+ FV G
Sbjct: 412 PVKWAYCVLDEGHKIRNPDSEVTMACKRFKTPHRIILSGTPIQNNLIELWSIYDFVFPGR 471
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LGT F+ Q+ TPI G + A++ + A + L +++ L+RR + ++ LP
Sbjct: 472 LGTLPVFQTQFATPINLGGYANANNVQVQTAYKCACILRDMISPYLLRRMKSDVATDLPK 531
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K+EQV+ +++D Q+ Y + S ++ ++G + L+ I L+K+CNHPDL+
Sbjct: 532 KSEQVLFCRLSDAQRREYEKFLSSKELKGILEGK------LRILAGIDVLRKICNHPDLL 585
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
+ AD Y A +SGK++ V+ +L + K +++L
Sbjct: 586 E---RNNAD--------FSANYGAVSRSGKMI--------VVKALLQMWKRQGH-RVLLF 625
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
Q LD+ E K GY Y+R+DGS +I++R+K+V+ +N+ + F+F+L++K GG G+
Sbjct: 626 CQTRQMLDILELFIKNEGYAYLRMDGSTSIQQRSKIVDCYNEDESYFVFLLTTKVGGLGI 685
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NL ANR+++FDPDWNP+ D QA R WR GQKK +YR +++G+IEEK+ RQ K+
Sbjct: 686 NLTSANRVIIFDPDWNPSTDMQARERAWRLGQKKSVTIYRLMTSGTIEEKIYHRQIFKQF 745
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQL 667
L++ ++ + R F ++L LF L
Sbjct: 746 LTNKILK-DPRQRRFFKSNDLHDLFML 771
>gi|156082193|ref|XP_001608585.1| DNA repair protein rhp54 [Plasmodium vivax Sal-1]
gi|148801524|gb|EDL42923.1| DNA repair protein rhp54, putative [Plasmodium vivax]
Length = 1064
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 237/399 (59%), Gaps = 17/399 (4%)
Query: 71 LAKPFKVPILNYTGGG--YSTKALG--VRREGARKALHDPTAPNALVLYTPPQLSAHDLL 126
L PFK P+ + Y K LG VRR G + + + Q A ++
Sbjct: 42 LFHPFKSPLPGFVSDRRLYVQKTLGAKVRRTGWLNLMKNSIPRRSDEAEASEQNKADEIK 101
Query: 127 K-----IDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
I + V VDP+L+ LR HQREGV F++EC+ +R + GCI+AD+MGL
Sbjct: 102 NEFVPLILYESENSKVEVDPILAQFLREHQREGVTFVFECLMNLRDDRISGCILADDMGL 161
Query: 182 GKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGS 241
GKTLQ I++++TLL+QG KP + + +I+ P+SL+ NW +EI KWL GR ++ +
Sbjct: 162 GKTLQSISVLYTLLKQGIDKKPAVRRCLILCPASLINNWNDEINKWLPGRCNVTCVNDNA 221
Query: 242 KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
K +I +KL F Y ++ +++ SYE FR + L K+ + +++CDE HRLKN +++
Sbjct: 222 KEKIVSKLEGF--KYDQKST--VIICSYECFRINNDSLDKSSIDMIICDEAHRLKNDKTK 277
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
TY ++ L A++R+LLSGTPIQNDL E+F+L+ N + FRK+Y PIL G+D
Sbjct: 278 TYMSIYKLAARKRLLLSGTPIQNDLSEFFALISLCNPDLFDDTNSFRKKYANPILIGRDK 337
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
A++ E+ A+ERL +L I N+ ++RRT+ LLSK LPVK + IK+ +Q+ LY
Sbjct: 338 DATEKEQEVASERLAELSTITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYVLF 397
Query: 422 IKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
+K +R +K ++T + L +I L+K+CNHP L+
Sbjct: 398 LKD---KRILKNEQSTN-KVNVLINIKKLEKICNHPLLL 432
Score = 224 bits (572), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/242 (45%), Positives = 150/242 (61%), Gaps = 6/242 (2%)
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
+S K +L +L IK T DK+V+VSNYTQTLD E L K YK+VRLDG ++IKKR
Sbjct: 525 MSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKENFYKFVRLDGGISIKKRH 584
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
KV+ F +S+ FIF+LSSK+GGCG+NLI +NRL++ DPDWNPAND QA+ARVWR+GQKK
Sbjct: 585 KVISDFTHSSDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKK 644
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
C++YR TG+I+EK+ QRQ K LSS +V S ++ LF + NT+ +
Sbjct: 645 ICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVTNTNFSKDQLSDENVKKLFNYKMNTLCE 704
Query: 675 THDKIKCSRCV------NGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGV 728
THD I+C+RC ++ LE +D++ W H + D IL A
Sbjct: 705 THDNIECTRCTIRNSTEKEVENFSEQLEDFEEEDVNTWAHHQNVESVPDEILAKAVKAAT 764
Query: 729 SF 730
+
Sbjct: 765 DY 766
>gi|302411025|ref|XP_003003346.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
gi|261358370|gb|EEY20798.1| DNA repair and recombination protein RAD26 [Verticillium albo-atrum
VaMs.102]
Length = 1117
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 187/570 (32%), Positives = 296/570 (51%), Gaps = 57/570 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 352 LFSYQKTGVQWLAELYS-----QNVGGIVGDEMGLGKTVQAIAFIAALHYSKKLTKPVI- 405
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS-----KAEIDNKLNSFMQTYGRRP 260
IVAP+++++ W NE +W RV+ L G + + D + +S + R
Sbjct: 406 ---IVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHSGRRDKSVRK 462
Query: 261 V-------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
+ +LV +Y +++ L E + DEGH+++N ++ L+
Sbjct: 463 IVDRVVKHGHVLVTTYNGLQTYQDELLHVEWDYAVLDEGHKIRNPNAEITVLCKELRTPN 522
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R++LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + A++ + A +
Sbjct: 523 RIILSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEK 582
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
E L +++ L++R ++ LP KTE+V+ KMTD Q E Y + SDAV + +
Sbjct: 583 CAETLKEAISQYLLQRLKIDVAADLPSKTERVLFCKMTDRQLEAYKQFLNSDAVNQILSA 642
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
+ G I L+K+CNHPDL+ +Q A G++ + KSGK+L
Sbjct: 643 RRKSLYG------IDILRKICNHPDLIDPHLQNKA-GYD---------WGDPEKSGKML- 685
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDGSMTIKK 552
V+ +L + K K +L S L++ E+ L L KYVR+DG +I+K
Sbjct: 686 -------VVRNLLQIWK-KLGHKTLLFSQSKMMLNVIEKFLGGLETVKYVRMDGETSIEK 737
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN IF+L+++ GG G+NL GANR+++FDPDWNP+ D QA R WR GQ
Sbjct: 738 RQSLIDQFNTDPEIDIFLLTTRTGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRLGQ 797
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENT 671
+ +YR ++ G+IEEK+ RQ K+ +++ V+ D ++ A F +S+L LF
Sbjct: 798 TRSVEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLKDPKQRAA--FDLSDLYDLFTF--GN 853
Query: 672 ISDTHDKIKCSRCVNGIQVK----PPPLES 697
D+ I S + QVK PP E+
Sbjct: 854 SQDSKGNIDRSSILKDAQVKFDGTTPPKEN 883
>gi|170593189|ref|XP_001901347.1| DNA excision repair protein ERCC-6 [Brugia malayi]
gi|158591414|gb|EDP30027.1| DNA excision repair protein ERCC-6, putative [Brugia malayi]
Length = 1103
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 186/539 (34%), Positives = 285/539 (52%), Gaps = 55/539 (10%)
Query: 147 LRPHQREGVKFMYE----CVTGVRIEDAYGCIMADEMGLGKTLQCIT----LMWTLLRQG 198
L +Q+ GV+++ E CV G I+ADEMGLGKT+Q I+ L ++ L
Sbjct: 231 LYKYQKTGVRWLNELHNQCVGG---------ILADEMGLGKTVQVISFLRGLAFSCLEDR 281
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG---GSKAEIDNKLNSFMQ 254
+ + +I+ P++L++ W E W RVA L I G G A++ K+ Q
Sbjct: 282 GFSFSGLGPVLIICPTTLIRQWLKEFRTWFPLCRVAILHISGSFHGQSAQLIRKM-VVSQ 340
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
+ G +L+ SY TF + L ++ DEGH+++N ++Q A+ ++ R
Sbjct: 341 SDG-----SVLLTSYGTFAKNRKHLIDKVWHYIILDEGHKIRNPDAQITLAVKEIRTPHR 395
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++LSG+P+QN L E +SL+ FV G LG + F ++ PI +G + A+ + A +
Sbjct: 396 LILSGSPLQNSLRELWSLIDFVYPGRLGALKSFMDKFSIPITQGGYANATAVQVRTAYKC 455
Query: 375 LEQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
L +N L+RR +S +LP KTEQV+ +T Q++LY + S R +
Sbjct: 456 ACILRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRKLYEEYLSSRECDRILS 515
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP---TGYAASYKSG 489
G M A + +L+KLCNHPDLV TG N ++ G+ A +SG
Sbjct: 516 GK------MDAFVGLITLRKLCNHPDLV-----TGGPNKFNDYDVTADEEMGFGAPCRSG 564
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
K+ VL +L + K K++L S Q L + E+ Y+Y+R+DG+
Sbjct: 565 KM--------QVLKALLKLWKRQGQ-KVLLFSQSRQMLTILEKFVIQERYEYLRMDGTTV 615
Query: 550 IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
++ R +VE FNK + FIF+L+++ GG G+NL GANR+V+FDPDWNP+ D QA R WR
Sbjct: 616 VRSRQLLVEEFNKNNKIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWR 675
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS-CVVDCEEDVARHFSMSELRSLFQL 667
GQ++ +YR L+ G+IEEK+ RQ K LS+ +VD + R F +EL LF L
Sbjct: 676 IGQERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQ--RRFFKTNELHELFCL 732
>gi|346977297|gb|EGY20749.1| DNA repair and recombination protein RAD26 [Verticillium dahliae
VdLs.17]
Length = 1116
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 291/567 (51%), Gaps = 57/567 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 355 YQKTGVQWLAELYS-----QNVGGIVGDEMGLGKTVQAIAFIAALHYSKKLTKPVI---- 405
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN------ 262
IVAP+++++ W NE +W RV+ L G + GRR +
Sbjct: 406 IVAPATVLRQWVNEFHRWWPALRVSILHSSGSGMINLREDDTDEETHNGRRDKSVRKIVD 465
Query: 263 ------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+LV +Y +++ L E + DEGH+++N ++ L+ R++
Sbjct: 466 RVVKHGHVLVTTYNGLQTYQDELLHVEWDYAVLDEGHKIRNPNAEITVLCKELRTPNRII 525
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + A++ + A + E
Sbjct: 526 LSGTPVQNNLSELWSLFDFIYPMRLGTLVTFRTQFEVPIKQGGYAGATNLQILTAEKCAE 585
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L +++ L++R ++ LP KTE+V+ KMTD Q E Y + SDAV + +
Sbjct: 586 TLKEAISQYLLQRLKIDVAADLPSKTERVLFCKMTDRQLEAYKQFLNSDAVNQILSARRK 645
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
+ G I L+K+CNHPDL+ +Q A G++ + KSGK+L
Sbjct: 646 SLYG------IDILRKICNHPDLIDPHLQNKA-GYD---------WGDPEKSGKML---- 685
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDGSMTIKKRAK 555
V+ +L + K K +L S L++ E+ L L KYVR+DG +I+KR
Sbjct: 686 ----VVRNLLQIWK-KLGHKTLLFSQSKMMLNVIEKFLGGLETVKYVRMDGETSIEKRQS 740
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
+++ FN IF+L+++ GG G+NL GANR+++FDPDWNP+ D QA R WR GQ +
Sbjct: 741 LIDRFNTDPEIDIFLLTTRTGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRLGQTRS 800
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQLEENTISD 674
+YR ++ G+IEEK+ RQ K+ +++ V+ D ++ A F +S+L LF D
Sbjct: 801 VEIYRLMTAGTIEEKIYHRQIFKQFMTNKVLKDPKQRAA--FDLSDLYDLFTF--GNSQD 856
Query: 675 THDKIKCSRCVNGIQVK----PPPLES 697
+ I S + QVK PP E+
Sbjct: 857 SKGNIDRSSILKDAQVKFDGTTPPKEN 883
>gi|380480210|emb|CCF42568.1| SNF2 super family protein [Colletotrichum higginsianum]
Length = 1153
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/563 (32%), Positives = 289/563 (51%), Gaps = 58/563 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ G+ ++ E E G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 386 LFAYQKTGIHWLAELY-----EQGVGGIIGDEMGLGKTVQAIAFVAALHYSKKLDKPVI- 439
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPV-- 261
+V P+++++ W NE +W RV+ L G + D+ S ++ GR
Sbjct: 440 ---VVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMVNVNEDDDDESHYRS-GRNGAAA 495
Query: 262 ----------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+LV +Y +S+ L E G + DEGH+++N ++ A L
Sbjct: 496 HHIVKRVVKHGHVLVTTYAGLQSYEDDLLSQEWGYAILDEGHKIRNPNAEVTIACKKLNT 555
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
R++LSGTPIQN+L+E +SL F+ LGT FR Q+E PI G + A++ A
Sbjct: 556 PHRLILSGTPIQNNLVELWSLFDFIFPMRLGTLVNFRHQFEMPIRMGGHANATNLAVLTA 615
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+ L +++ L++R ++ LP KTEQV+ K+T Q E Y I SDAV + M
Sbjct: 616 EKCATTLKETISQYLLQRLKTDVASDLPEKTEQVLFCKLTPEQNEEYVRFIHSDAVSQIM 675
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLV--MDKIQTGADGFENAMNILPTGYAASYKSG 489
AL I L+K+CNHPDLV K Q G D + + +SG
Sbjct: 676 ARKRQ------ALYGIDILRKICNHPDLVNVSKKSQPGYD------------WGSPRRSG 717
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF-ERLSKLRGYKYVRLDGSM 548
KL ++ +L+ + K +L S L++ E + K+ G +Y+R+DG +
Sbjct: 718 KL--QMVGELLPMWKRFG-------HKTLLFSQTKIMLNILQEFIGKMEGMRYLRMDGEV 768
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
++KR +++ FN + +F+L++K GG G+NL GA R+V++DPDWNP+ D QA R W
Sbjct: 769 AVEKRQALIDRFNNDPSIDVFLLTTKTGGLGVNLTGATRIVIYDPDWNPSTDLQARERAW 828
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
R GQ KP +YR +++G+IEEK+ RQ K+ +++ V+ + A +F +S+L LF
Sbjct: 829 RLGQTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRA-NFDLSDLYDLFSFG 887
Query: 669 ENTISDTHDKIKCSRCVNGIQVK 691
+N S + S+ G +VK
Sbjct: 888 DN--SHSMASANRSKVFEGAEVK 908
>gi|312071855|ref|XP_003138800.1| hypothetical protein LOAG_03215 [Loa loa]
Length = 1112
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 281/541 (51%), Gaps = 49/541 (9%)
Query: 147 LRPHQREGVKFMYE----CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL----LRQG 198
L +Q+ GV+++ E CV G I+ADEMGLGKT+Q I+ + L L
Sbjct: 250 LYKYQKTGVRWLNELHNQCVGG---------ILADEMGLGKTVQVISFLRALAFSRLEDR 300
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYG 257
+ + +I+ P++L+ W E W RVA L G + + +
Sbjct: 301 GFSFFGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIRKMVVA-- 358
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
R +L+ SY TF + L V+ DEGH+++N E+Q A+ ++ R++L
Sbjct: 359 -RSDGNVLLTSYGTFARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPHRLIL 417
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SG+P+QN L E +SLV FV G LG F ++ PI +G + A+ + A +
Sbjct: 418 SGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYKCACI 477
Query: 378 LIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L +N L+RR +S +LP KTEQV+ +T Q+ LY + S R + G
Sbjct: 478 LRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLYEEYLSSHECSRILSGKT 537
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVM---DKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ +G+ +L+KLCNHPDL+ +K + EN M+ + A +SGK+
Sbjct: 538 DAFVGLI------TLRKLCNHPDLITGGPNKFNDYSVTAENEMD-----FGAPCRSGKM- 585
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
VL +L + K D K++L S Q L + E+ GY+Y+R+DG+ ++
Sbjct: 586 -------QVLKALLKLWKQQ-DQKVLLFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVRS 637
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +VE FNK FIF+L+++ GG G+NL GANR+V+FDPDWNP+ D QA R WR GQ
Sbjct: 638 RQLLVEKFNKVDEIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRIGQ 697
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSS-CVVDCEEDVARHFSMSELRSLFQLEENT 671
++ +YR L+ G+IEEK+ RQ K LS+ +VD + R F +EL LF L ++
Sbjct: 698 ERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQ--RRFFKTNELHELFCLGDSK 755
Query: 672 I 672
+
Sbjct: 756 V 756
>gi|393911645|gb|EFO25268.2| hypothetical protein LOAG_03215 [Loa loa]
Length = 1113
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 184/541 (34%), Positives = 281/541 (51%), Gaps = 49/541 (9%)
Query: 147 LRPHQREGVKFMYE----CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL----LRQG 198
L +Q+ GV+++ E CV G I+ADEMGLGKT+Q I+ + L L
Sbjct: 250 LYKYQKTGVRWLNELHNQCVGG---------ILADEMGLGKTVQVISFLRALAFSRLEDR 300
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYG 257
+ + +I+ P++L+ W E W RVA L G + + +
Sbjct: 301 GFSFFGLGPVLIICPTTLIHQWLKEFHTWFPLCRVAILHSSGSFHGQNPQLIRKMVVA-- 358
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
R +L+ SY TF + L V+ DEGH+++N E+Q A+ ++ R++L
Sbjct: 359 -RSDGNVLLTSYGTFARNRKHLVDKIWHYVILDEGHKIRNPEAQITLAVKEVRTPHRLIL 417
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SG+P+QN L E +SLV FV G LG F ++ PI +G + A+ + A +
Sbjct: 418 SGSPLQNSLRELWSLVDFVYPGRLGALHSFMDKFSIPITQGGYANATAVQVRTAYKCACI 477
Query: 378 LIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L +N L+RR +S +LP KTEQV+ +T Q+ LY + S R + G
Sbjct: 478 LRDAINPYLLRRLKKDVEMSIHLPTKTEQVLFCNITPCQRSLYEEYLSSHECSRILSGKT 537
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVM---DKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ +G+ +L+KLCNHPDL+ +K + EN M+ + A +SGK+
Sbjct: 538 DAFVGLI------TLRKLCNHPDLITGGPNKFNDYSVTAENEMD-----FGAPCRSGKM- 585
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
VL +L + K D K++L S Q L + E+ GY+Y+R+DG+ ++
Sbjct: 586 -------QVLKALLKLWKQQ-DQKVLLFSQSRQMLTILEKFVIQEGYEYLRMDGTTPVRS 637
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +VE FNK FIF+L+++ GG G+NL GANR+V+FDPDWNP+ D QA R WR GQ
Sbjct: 638 RQLLVEKFNKVDEIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRIGQ 697
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSS-CVVDCEEDVARHFSMSELRSLFQLEENT 671
++ +YR L+ G+IEEK+ RQ K LS+ +VD + R F +EL LF L ++
Sbjct: 698 ERAVTIYRLLTGGTIEEKIYHRQIFKVFLSNRILVDPRQ--RRFFKTNELHELFCLGDSK 755
Query: 672 I 672
+
Sbjct: 756 V 756
>gi|408391786|gb|EKJ71154.1| hypothetical protein FPSE_08660 [Fusarium pseudograminearum CS3096]
Length = 1163
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 283/543 (52%), Gaps = 53/543 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 401 YQKTGVQWLAELY-----KQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLRRPVI---- 451
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSFM------QTYGR 258
+VAP++L++ W +E +W RV+ L G K E + L+ + Q
Sbjct: 452 VVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEYDLDHYKPLATKSQNAAS 511
Query: 259 RPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R VN + LV +Y +++A L E + DEGH+++N ++ L
Sbjct: 512 RIVNGVAKSGHVLVTTYTGLQTYADTLLPVEWDYAVLDEGHKIRNPNAEITVTCKELNTP 571
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 572 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQGGYANASNLQVMTAE 631
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L + L++R ++ LP KTEQV+ K+T+ Q + Y IKSD V +
Sbjct: 632 KCAEALKETIGEYLLQRLKVDVAADLPEKTEQVLFCKLTEGQHKAYETFIKSDEVSAIL- 690
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
N + +L I L+K+CNHPDL +DK G A Y G
Sbjct: 691 ---NRR--RQSLYGIDILRKICNHPDL-LDK---------------SLGKKAGYDFGN-- 727
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+LSAKL + +L + + K +L S Q LD+ E+ G YVR+DG + +
Sbjct: 728 PKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDR 787
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN++ + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 788 RQTMIDKFNESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 847
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KKP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF NT
Sbjct: 848 KKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLFSF--NTG 904
Query: 673 SDT 675
D
Sbjct: 905 KDA 907
>gi|452822792|gb|EME29808.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 924
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 192/579 (33%), Positives = 303/579 (52%), Gaps = 57/579 (9%)
Query: 147 LRPHQREGVKFMYEC-VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
L P+Q+ GV++++E GV G I+ DEMGLGKT+Q I L+ +L L P+
Sbjct: 198 LFPYQQVGVQWLWELHCQGV------GGIVGDEMGLGKTIQVIVLLASLSYSHLLPGPVC 251
Query: 206 DKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
IVAP++L+ W E T W RV + G D L + I
Sbjct: 252 ----IVAPATLLSQWKREFATWWPSFRVRIMHKSAG-----DGDLWIVEDIIEQ---GDI 299
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
LV SYE R + ++ V+ DEGHR++N +++ K R++++G P+QN
Sbjct: 300 LVTSYEQVRRFHEYILVHKWDYVILDEGHRIRNPDAEITLVCKRFKTVHRIIMTGAPLQN 359
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
L E +SL FV G LGT F +Q+ PI G A+ + A + L +V+
Sbjct: 360 RLKELWSLFDFVYPGKLGTLPVFEEQFSVPITLGSYLNATPLQVHTAYKCASVLRNLVSP 419
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
L+RR ++ LP K EQ++ K+T Q+ELY + S +++ ++G N L
Sbjct: 420 YLLRRLKKDVALQLPKKQEQILFCKLTKEQRELYKKYLNSRELQKVLQGSVN------ML 473
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
++++ L+K+CNHPDL ENA+ Y ++GKL +VLD
Sbjct: 474 TAVSVLRKICNHPDLYD----------ENALED-DRRYGEWTRAGKL--------VVLDQ 514
Query: 505 MLAVIKMTTDDKIVLVSNYTQT-LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
+L + + DD VL+ + ++ LD+ E ++ R Y Y+R+DG +++R K++++FN+
Sbjct: 515 VL--LSWSKDDSRVLIFSQSRAMLDILEMFARQRRYTYLRMDGETAMQERMKLIDSFNQD 572
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
F+F+L++K GG G+NL GANR+V++DPDWNP+ D QA R WR GQK+ +YR ++
Sbjct: 573 DEVFLFLLTTKVGGLGINLTGANRVVLYDPDWNPSTDLQARERAWRIGQKRDVIIYRLVT 632
Query: 624 TGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQL--EENTISDTHDKIK 680
+G+IEEK+ RQ K+ L++ V+ D ++ R F +L LF L E ++T D
Sbjct: 633 SGTIEEKIYHRQIFKQLLTNKVLKDAQQ--TRFFRPKDLFDLFTLGDEYEDGTETGDLFS 690
Query: 681 CSRCV--NGIQVKPPPLESDC--TDDLSCWHHVTEKRWL 715
+ V G + + E DC +D +C E R L
Sbjct: 691 GTSAVEWTGSRFQRSENEEDCAESDKDNCIESTNETRLL 729
>gi|255936215|ref|XP_002559134.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583754|emb|CAP91771.1| Pc13g07020 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1116
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/555 (32%), Positives = 292/555 (52%), Gaps = 63/555 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+S L +Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L K
Sbjct: 328 ISRFLFSYQKTGVQWLWELH-----QQTVGGIIGDEMGLGKTIQAISYLAALHHSKKFTK 382
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG------GSKAEIDNKLNS-FMQ 254
P AI+V P++L+K W NE +W RV+ L G G ++ +N L S M
Sbjct: 383 P----AIVVCPATLMKQWVNEFHRWWPPFRVSILHSSGSGMINIGKESSRENALTSEMMG 438
Query: 255 TYGRRPVNP-----------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
++ R ++ +LV +Y +S+A L E G + DEGH+++N
Sbjct: 439 SHSSRHLSAGQKAAKKIIKRVTEDGHVLVTTYSGLQSYADALVDVEWGCAILDEGHKIRN 498
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
++ + L+ R++LSGTP+QN L++ +SL FV LG F+ Q+E PI +
Sbjct: 499 PDAGITFSCKELRTPHRIILSGTPMQNSLVDLWSLFDFVFPMRLGNLVTFKNQFEIPIRQ 558
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS+ + A + E L ++ L++R A ++ LP+K+EQV+ K+T LQ+ +
Sbjct: 559 GGYASASNLQVQTAAKCAETLKDAISPYLLQRFKADVTSDLPLKSEQVIFCKLTQLQRTI 618
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + SD ++ ++G N+ G I L+K+ NHPDL +++ + +A
Sbjct: 619 YKRFLGSDDMKSIIRGRRNSLYG------IDILRKISNHPDLADHTLRSREADYGDA--- 669
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKL 536
E S K+ VL +L V + T K +L + LD+ E+ L L
Sbjct: 670 ----------------ERSGKMKVLKGLLEVWR-DTGHKTLLFTQGRLMLDIIEKFLGVL 712
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
G+ R+DG+ IK+R +V FN N +F+L+++ GG G+NL GA+R++++DPDWN
Sbjct: 713 GGFNCRRMDGTTPIKERQSLVNDFNNDPNIHVFLLTTRVGGIGVNLTGADRVIIYDPDWN 772
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
P+ D QA R WR GQK+ ++R ++ G+IEEK+ RQ K+ L++ + + F
Sbjct: 773 PSTDLQARERAWRLGQKRDVTIFRLMTKGTIEEKIYHRQIFKQFLTNKIT-RDPHQREGF 831
Query: 657 SMSELRSLFQL-EEN 670
+S+L LF L +EN
Sbjct: 832 QLSDLYDLFTLTDEN 846
>gi|342884633|gb|EGU84838.1| hypothetical protein FOXB_04619 [Fusarium oxysporum Fo5176]
Length = 1160
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/533 (33%), Positives = 281/533 (52%), Gaps = 51/533 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 400 YQKTGVQWLAELY-----KQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLRRPVI---- 450
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSFM------QTYGR 258
+VAP++L++ W +E +W RV+ L G K E + L+ F + +
Sbjct: 451 VVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEYDLDHFQPLATKSEKAAQ 510
Query: 259 RPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R VN + LV +Y +++A L E + DEGH+++N ++ L
Sbjct: 511 RIVNGVVKSGHVLVTTYTGLQTYAETLLPVEWDYAVLDEGHKIRNPNAEITVTCKELNTP 570
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 571 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQGGYANASNLQVMTAE 630
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L + L++R ++ LP KTEQV+ K+TD Q + Y IKSD V +
Sbjct: 631 KCAEALKETIGEYLLQRLKVDVAADLPEKTEQVLFCKLTDGQHKAYETFIKSDEVSAIL- 689
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
N + +L I L+K+CNHPDL +DK G A Y G
Sbjct: 690 ---NRR--RQSLYGIDILRKICNHPDL-LDKT---------------LGKKAGYDFGN-- 726
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+LSAKL + +L + + K +L S Q L++ E+ G YVR+DG + +
Sbjct: 727 PKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCISECGISYVRMDGETPVDQ 786
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN++ + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 787 RQPMIDRFNESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 846
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
KKP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF
Sbjct: 847 KKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLF 898
>gi|417406531|gb|JAA49919.1| Putative snf2 family dna-dependent atpase domain-containing protein
[Desmodus rotundus]
Length = 1486
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 175/527 (33%), Positives = 281/527 (53%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 504 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFQ 558
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G S + + + + +G
Sbjct: 559 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSSTHKKEKLIQDIVHCHG----- 613
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 614 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPM 672
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 673 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 732
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G T++
Sbjct: 733 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNG--ETQI- 789
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
S +T+L+K+CNHPDL + ++ + GY + S K++
Sbjct: 790 ---FSGLTALRKICNHPDLFSGGPKNHKGISDDELEEDRFGY----------WKRSGKMI 836
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I + +++L S Q LDL E + + Y Y+++DG+ TI R ++ F
Sbjct: 837 VVESLLK-IWHKQNQRVLLFSQSRQMLDLLEVFLRAQKYSYLKMDGTTTIASRQPLIARF 895
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
NK ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 896 NKETSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 955
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 956 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFSL 1001
>gi|310789538|gb|EFQ25071.1| SNF2 family domain-containing protein [Glomerella graminicola
M1.001]
Length = 1153
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 184/560 (32%), Positives = 282/560 (50%), Gaps = 52/560 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GV ++ E E G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 387 LFAYQKTGVNWLAELY-----EQGVGGIIGDEMGLGKTVQAIAFVAALHYSKILDKPVI- 440
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPV-- 261
+V P+++++ W NE +W RV+ L G + D+ + + P
Sbjct: 441 ---VVVPATVMQQWVNEFHRWWPALRVSILHSSGSGMINVNEDDDDEPYSGSGKNGPAAR 497
Query: 262 ---------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+LV +Y S+ L E G + DEGH+++N + A L
Sbjct: 498 QIIKRVVKHGHVLVTTYAGLHSYQDELLSYEWGYAVLDEGHKIRNPNADITIACKKLNTP 557
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
R++LSGTPIQN+L+E +SL F+ LGT FR+Q+E PI G + A++ A
Sbjct: 558 HRLILSGTPIQNNLVELWSLFDFIYPMRLGTLVSFRQQFEMPIRMGGHANATNLAVLTAE 617
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ L +++ L++R ++ LP KTEQV+ K+T Q E Y I SDAV + M
Sbjct: 618 KCATTLKEAISKYLLQRLKTDVASDLPEKTEQVLFCKLTPEQNEEYVRFIHSDAVSQIMA 677
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
AL I L+K+CNHPDLV N+ G Y G
Sbjct: 678 KKRQ------ALYGIDILRKICNHPDLV---------------NVRKKGQPG-YDWGN-- 713
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF-ERLSKLRGYKYVRLDGSMTIK 551
S+KL + +L + K K +L S LD+ E + K+ G Y+R+DG + ++
Sbjct: 714 PRRSSKLQTVGELLPLWKRFGH-KTLLFSQTKIMLDILQEFIGKMEGMNYLRMDGEVAVE 772
Query: 552 KRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
KR +++ FN + +F+L++K GG G+NL GA R+V++DPDWNP+ D QA R WR G
Sbjct: 773 KRQALIDRFNHDPSIHVFLLTTKTGGLGVNLTGATRIVIYDPDWNPSTDLQARERAWRLG 832
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
Q KP +YR +++G+IEEK+ RQ K+ +++ V+ + A +F +S+L LF +N
Sbjct: 833 QTKPVAIYRLMTSGTIEEKIYHRQIFKQFMTNKVLKDPKQRA-NFDLSDLYDLFSFGDN- 890
Query: 672 ISDTHDKIKCSRCVNGIQVK 691
S + S+ G +VK
Sbjct: 891 -SHSMASANRSKVFEGAEVK 909
>gi|302892777|ref|XP_003045270.1| transcription-coupled repair protein CSB/RAD26 [Nectria
haematococca mpVI 77-13-4]
gi|256726195|gb|EEU39557.1| transcription-coupled repair protein CSB/RAD26 [Nectria
haematococca mpVI 77-13-4]
Length = 1164
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 278/535 (51%), Gaps = 51/535 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 401 YQKTGVQWLAELY-----KQHVGGIVGDEMGLGKTVQLIAFLAALHYSKKLTRPVI---- 451
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSFM------QTYGR 258
+VAP++L++ W +E +W RVA L G K E + L+ F + R
Sbjct: 452 VVAPATLLRQWVSEFHRWWPPLRVAILHASGSGMMDPKVEDEADLDHFKPLATKSEKAAR 511
Query: 259 RPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R VN + LV +Y +++A L + DEGH+++N ++ L
Sbjct: 512 RIVNGVVKNGHVLVTTYAGLQTYADTLLPVHWDYAVLDEGHKIRNPNAEITVTCKELNTP 571
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 572 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQGGYANASNLQVMTAE 631
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+TD Q++ Y +KSD V +
Sbjct: 632 KCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTDGQRKAYETFLKSDEVSSILS 691
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ L I L+K+CNHPDL +DK G Y G
Sbjct: 692 RTRQS------LYGIDILRKICNHPDL-LDK---------------SLGSKPGYDFGN-- 727
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+LSAKL + +L + + K +L S Q L++ E+ + YVR+DG + +
Sbjct: 728 PKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCIRECDISYVRMDGETPVDQ 787
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN+ N +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 788 RQPMIDKFNEDPNIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 847
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
KKP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF
Sbjct: 848 KKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLFSF 901
>gi|46111317|ref|XP_382716.1| hypothetical protein FG02540.1 [Gibberella zeae PH-1]
Length = 1163
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 283/543 (52%), Gaps = 53/543 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 401 YQKTGVQWLAELY-----KQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLRRPVI---- 451
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSFM------QTYGR 258
+VAP++L++ W +E +W RV+ L G K E + L+ + Q
Sbjct: 452 VVAPATLLRQWVSEFHRWWPPLRVSILHASGSGMMNPKFEDEYDLDHYKPLATKSQKAAS 511
Query: 259 RPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R VN + LV +Y +++A L E + DEGH+++N ++ L
Sbjct: 512 RIVNGVAKSGHVLVTTYTGLQTYADTLLPVEWDYAVLDEGHKIRNPNAEITVTCKELNTP 571
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 572 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQGGYANASNLQVMTAE 631
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L + L++R ++ LP KTEQV+ K+T+ Q + Y IKSD V +
Sbjct: 632 KCAEALKETIGEYLLQRLKVDVAADLPEKTEQVLFCKLTEGQHKAYETFIKSDEVSAIL- 690
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
N + +L I L+K+CNHPDL +DK G A Y G
Sbjct: 691 ---NRR--RQSLYGIDILRKICNHPDL-LDK---------------SLGKKAGYDFGN-- 727
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+LSAKL + +L + + K +L S Q LD+ E+ G YVR+DG + +
Sbjct: 728 PKLSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLDIIEKCIGECGISYVRMDGETPVDR 787
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN++ + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 788 RQTMIDKFNESPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 847
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KKP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF NT
Sbjct: 848 KKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLFSF--NTG 904
Query: 673 SDT 675
D
Sbjct: 905 KDA 907
>gi|255726894|ref|XP_002548373.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134297|gb|EER33852.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 1043
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 289/554 (52%), Gaps = 69/554 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 281 LFDYQKTCVQWLWELYS-----QKTGGILGDEMGLGKTIQIISFLAGLHYSGLLDKPVL- 334
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDN----KLNSFMQTYG----- 257
IV P++++ W NE +W + GS N KL F++
Sbjct: 335 ---IVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMNGKNINEAKLEEFLENADPNSSK 391
Query: 258 ------RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
+ +N +LV +Y R ++ L E G V+ DEGH+++N +
Sbjct: 392 SSLSGVKSQINAKEIIDRVMEKGHVLVTTYVGLRIYSKYLLPREWGYVVLDEGHKIRNPD 451
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
S +K R++LSGTPIQN+L+E +SL FV G LGT F++Q+ PI G
Sbjct: 452 SDISLTCKMIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQQFSIPINIGG 511
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
+ +++ + A + L +++ ++RR + ++K LP K E V+ +K+T Q+ELY
Sbjct: 512 YANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAKDLPKKNEMVLFVKLTKPQQELYE 571
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
++S+ + +KG N +G I L+K+CNHPDLV + +AM +
Sbjct: 572 KFLQSEDLDSILKGKRNMLMG------IDILRKICNHPDLV----------YRDAM-MKK 614
Query: 480 TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER----LSK 535
Y +SGK+ VL +L + + + D K +L Q LD+ E+ L
Sbjct: 615 KSYGDPSRSGKM--------QVLKNLLQIWQ-SEDHKTLLFCQTRQMLDILEKFVANLPL 665
Query: 536 LRG--YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
L G + Y+R+DGS I +R +V+ FN+ N +F+L++K GG G+NL GA+R++++DP
Sbjct: 666 LNGGEFNYLRMDGSTPISRRQMLVDKFNRDPNMHVFLLTTKVGGLGVNLTGADRVIIYDP 725
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNP+ D QA R WR GQKK +YR ++TGSIEEK+ RQ K L++ ++ +
Sbjct: 726 DWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNKIL-KDPKQR 784
Query: 654 RHFSMSELRSLFQL 667
R F ++L LF L
Sbjct: 785 RFFKANDLHDLFTL 798
>gi|238492801|ref|XP_002377637.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus
NRRL3357]
gi|220696131|gb|EED52473.1| DNA repair protein Rhp26/Rad26, putative [Aspergillus flavus
NRRL3357]
Length = 1076
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 278/530 (52%), Gaps = 54/530 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L KP+I IV P++++K W NE +W
Sbjct: 315 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTKPVI----IVCPATVMKQWVNEFHRWWPPF 370
Query: 231 RVAALPIDGGSKAEIDNKLNS----FMQTY-----------GRRPV------NPILVISY 269
RV+ L G I N+ + QT+ GR+ V +LV +Y
Sbjct: 371 RVSILHTSGSGMVNIRNESSREDALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTY 430
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
+++ +L E G + DEGH+++N + L+ R++LSGTP+QN+L E
Sbjct: 431 SGLQTYTPLLIPVEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTEL 490
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
+SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L++R
Sbjct: 491 WSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQR 550
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LP K+EQV+ K+T LQ++ Y + + S+ ++ ++G G +
Sbjct: 551 FKVDVAADLPKKSEQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYG------VDI 604
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
L+K+CNHPDL K+ + G+ N + S K+ V+ ++L +
Sbjct: 605 LRKICNHPDLQSHKLTSHKAGYGNP-------------------DKSGKMQVVKSLLELW 645
Query: 510 KMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
K T K +L + + LD+ ++ L G+ Y R+DG+ I R +V+ FN + +
Sbjct: 646 K-DTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHV 704
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G+IE
Sbjct: 705 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIE 764
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDK 678
EK+ RQ K+ L++ ++ + + F +S+L LF L E+ T K
Sbjct: 765 EKIYHRQIFKQFLTNKILK-DPKQRQTFQLSDLHDLFSLGEDGQGPTETK 813
>gi|396491459|ref|XP_003843573.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
gi|312220152|emb|CBY00094.1| similar to DNA repair protein Rhp26/Rad26 [Leptosphaeria maculans
JN3]
Length = 1224
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/554 (32%), Positives = 283/554 (51%), Gaps = 63/554 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L L KP+ I
Sbjct: 418 YQKTGVQWLWELYS-----QNVGGIIGDEMGLGKTIQAISFVAGLHYSKLLTKPV----I 468
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQ------TYGRRPV- 261
+V P++++K W NE +W RV+ L G +D + M+ +YG
Sbjct: 469 VVCPATVMKQWVNEFHRWWPALRVSILHTSGSGM--LDTQREDRMERELELRSYGDYDTT 526
Query: 262 ------------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y ++++ L E + DEGH+++N +
Sbjct: 527 LTGAGKAAKKILEKVKRDGHVLVTTYSGLQTYSEFLIPTEWECAILDEGHKIRNPNTAIT 586
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI RG + A
Sbjct: 587 IHCKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANA 646
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ E A E L V+ L++R ++ LP K EQV+ K+T Q+ Y +
Sbjct: 647 SNLEFETAVRCAETLKDAVSPYLLQRFKVDVATDLPQKKEQVLFCKLTRQQRAAYEGFLA 706
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S+ ++ G N G + L+K+CNHPDL KI + G++ Y
Sbjct: 707 SNDMKSITDGKRNMLFG------VDYLRKVCNHPDLTEHKILSKKPGYD---------YG 751
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYV 542
A +SG K+ V+ +L++ K K +L + + LD+ ++ S L G +
Sbjct: 752 APNRSG--------KMQVVKELLSLWK-KGGHKTLLFAQHRIMLDILQKFVSHLPGINWR 802
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG IK+R +V+ FN + +F+L++K GG G+NL GANR++++DPDWNP+ D Q
Sbjct: 803 RMDGETPIKERQNLVDEFNNNPDLDVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQ 862
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR +S G+IEEK+ RQ K+ L++ V+ + + F MS+L
Sbjct: 863 ARERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFQMSDLH 921
Query: 663 SLFQLEENTISDTH 676
LF L ENT +T
Sbjct: 922 DLFTLGENTEGETE 935
>gi|67541879|ref|XP_664707.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4]
gi|40742118|gb|EAA61308.1| hypothetical protein AN7103.2 [Aspergillus nidulans FGSC A4]
gi|259483574|tpe|CBF79076.1| TPA: DNA repair protein Rhp26/Rad26, putative (AFU_orthologue;
AFUA_4G03840) [Aspergillus nidulans FGSC A4]
Length = 1193
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 291/549 (53%), Gaps = 63/549 (11%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L +Q+ GV++M+E + G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 397 LLFDYQKTGVQWMWELH-----QQQVGGIIGDEMGLGKTIQAIAFLAGLHYSKRLTKPII 451
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI---DNKLNSFMQTYG---- 257
+V P++++K W NE +W RV+ L G I ++ ++ M YG
Sbjct: 452 ----VVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESSREDALM--YGTYWS 505
Query: 258 --------------RRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
+R V +LV +Y +S+AS+L E G + DEGH+++N +
Sbjct: 506 GGSSSGLKAARKVVKRVVEEGHVLVTTYSGLQSYASLLIPVEWGGTILDEGHKIRNPNTS 565
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI +G +
Sbjct: 566 ITMHAKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYA 625
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
AS+ + A + E L ++ L++R ++ LP K+EQV+ ++T Q++ Y
Sbjct: 626 NASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCRLTKPQRQAYEAF 685
Query: 422 IKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTG 481
+ S+ ++ ++G G + L+K+CNHPDL K+ + N PT
Sbjct: 686 LGSEEMQSILRGRRQVLYG------VDILRKICNHPDLQNHKLLYAKPNYGN-----PT- 733
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYK 540
KSGK+ V+ ++L + K T K +L + + LD+ E+ K L G+
Sbjct: 734 -----KSGKM--------QVVRSLLELWK-ETGHKTLLFAQHRIMLDILEKFVKSLSGFN 779
Query: 541 YVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Y R+DG+ I+ R +V+ FNK + +F+L++K GG G+NL GA+R++++DPDWNP+ D
Sbjct: 780 YRRMDGTTPIQHRQTMVDEFNKDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTD 839
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QA R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F +S+
Sbjct: 840 VQARERAWRLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQLSD 898
Query: 661 LRSLFQLEE 669
L LF L E
Sbjct: 899 LYDLFALGE 907
>gi|239615027|gb|EEQ92014.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis ER-3]
gi|327349863|gb|EGE78720.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis ATCC 18188]
Length = 1260
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 289/552 (52%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L KP+ I
Sbjct: 431 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHHSRILTKPV----I 481
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI------DNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G + D +L S +
Sbjct: 482 VVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMVNLRRESYADARLESQLWEPDQPRGL 541
Query: 254 ---QTYGRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q +R + +LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 542 TKEQKAAKRILKRVLEEGHVLVTTYSGLQTYCSLLIPVDWGCAILDEGHKIRNPDTAITI 601
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN L E +SL FV LGT FR Q+E PI +G + AS
Sbjct: 602 HCKELRTAHRLILSGTPMQNSLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANAS 661
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S
Sbjct: 662 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKIQRSAYEAFLGS 721
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K + + Y +
Sbjct: 722 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKTLSKKSSY---------NYGS 766
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
+ KSG K+ ++ ++L + + T K +L + + LD+ ER K L G+KY R
Sbjct: 767 ASKSG--------KMQIVKSLLELWR-DTGHKTLLFAQHRIMLDILERFIKSLSGFKYQR 817
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 818 MDGNTPIKLRQSMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 877
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 878 RERSWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 936
Query: 664 LFQLEENTISDT 675
LF L + ++T
Sbjct: 937 LFTLGNDGPTET 948
>gi|119487132|ref|XP_001262421.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL
181]
gi|119410578|gb|EAW20524.1| DNA repair protein Rhp26/Rad26, putative [Neosartorya fischeri NRRL
181]
Length = 1214
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 176/550 (32%), Positives = 285/550 (51%), Gaps = 60/550 (10%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L+ L +Q+ GV++++E + G I+ DEMGLGKT+Q I + L L
Sbjct: 416 LNPYLFDYQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQTIAFLAGLHYSKKLDG 470
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNS----FMQTYG 257
P+I +V P++++K W NE +W RV+ L G I ++ + QTY
Sbjct: 471 PVI----VVCPATVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIRSESSREDALLAQTYS 526
Query: 258 -----------------RRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
+R V +LV +Y ++++ L E G + DEGH+++N
Sbjct: 527 SSSRGFTSNQKAARKVVKRVVEEGHVLVTTYSGLQTYSHFLIPVEWGCAILDEGHKIRNP 586
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+ L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI +G
Sbjct: 587 NTSITIHCKELRTPHRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQG 646
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ AS+ + A + E L ++ L++R ++ LP KTEQV+ K+T Q+ Y
Sbjct: 647 GYANASNLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKPQRMAY 706
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
+ +KS+ + +KG G + L+K+CNHPDL K+Q+ G+ NA
Sbjct: 707 ESFLKSEEMESILKGRRQILYG------VDILRKICNHPDLQNHKLQSHQLGYGNANK-- 758
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LR 537
S K+ V+ ++L + + T K +L + + LD+ E+ + L
Sbjct: 759 -----------------SGKMQVVKSLLELWR-DTGHKTLLFAQHRIMLDILEKFVRSLS 800
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
G+ + R+DG+ I+ R +V+ FN N +F+L++K GG G+NL GA+R++++DPDWNP
Sbjct: 801 GFNHRRMDGTTPIQNRQTMVDEFNNDPNIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNP 860
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFS 657
+ D QA R WR GQK+ VYR ++ G+IEEK+ RQ K+ L++ ++ + F
Sbjct: 861 STDVQARERAWRLGQKRDVSVYRLMTAGTIEEKIYHRQIFKQFLTNKILRDPKQRQTSFQ 920
Query: 658 MSELRSLFQL 667
+S+L LF L
Sbjct: 921 LSDLYDLFAL 930
>gi|261188034|ref|XP_002620434.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis SLH14081]
gi|239593445|gb|EEQ76026.1| DNA repair and recombination protein RAD26 [Ajellomyces
dermatitidis SLH14081]
Length = 1260
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 289/552 (52%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L KP+ I
Sbjct: 431 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHHSRILTKPV----I 481
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI------DNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G + D +L S +
Sbjct: 482 VVCPPTVMKQWVNEFHRWWAPFRVSILHTSGSGMVNLRRESYADPRLESQLWEPDQPRGL 541
Query: 254 ---QTYGRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q +R + +LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 542 TKEQKAAKRILKRVLEEGHVLVTTYSGLQTYCSLLIPVDWGCAILDEGHKIRNPDTAITI 601
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN L E +SL FV LGT FR Q+E PI +G + AS
Sbjct: 602 HCKELRTAHRLILSGTPMQNSLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANAS 661
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S
Sbjct: 662 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKIQRSAYEAFLGS 721
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K + + Y +
Sbjct: 722 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKTLSKKSSY---------NYGS 766
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
+ KSG K+ ++ ++L + + T K +L + + LD+ ER K L G+KY R
Sbjct: 767 ASKSG--------KMQIVKSLLELWR-DTGHKTLLFAQHRIMLDILERFIKSLSGFKYQR 817
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 818 MDGNTPIKLRQSMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 877
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 878 RERSWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 936
Query: 664 LFQLEENTISDT 675
LF L + ++T
Sbjct: 937 LFTLGNDGPTET 948
>gi|83774735|dbj|BAE64858.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 977
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 276/522 (52%), Gaps = 54/522 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L KP+I IV P++++K W NE +W
Sbjct: 310 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTKPVI----IVCPATVMKQWVNEFHRWWPPF 365
Query: 231 RVAALPIDGGSKAEIDNKLNS----FMQTY-----------GRRPV------NPILVISY 269
RV+ L G I N+ + QT+ GR+ V +LV +Y
Sbjct: 366 RVSILHTSGSGMVNIRNESSREDALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTY 425
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
+++ +L E G + DEGH+++N + L+ R++LSGTP+QN+L E
Sbjct: 426 SGLQTYTPLLIPVEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTEL 485
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
+SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L++R
Sbjct: 486 WSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQR 545
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LP K+EQV+ K+T LQ++ Y + + S+ ++ ++G G +
Sbjct: 546 FKIDVAADLPKKSEQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYG------VDI 599
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
L+K+CNHPDL K+ + G+ N + S K+ V+ ++L +
Sbjct: 600 LRKICNHPDLQSHKLTSHKAGYGNP-------------------DKSGKMQVVKSLLELW 640
Query: 510 KMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
K T K +L + + LD+ ++ L G+ Y R+DG+ I R +V+ FN + +
Sbjct: 641 K-DTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHV 699
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G+IE
Sbjct: 700 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIE 759
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
EK+ RQ K+ L++ ++ + + F +S+L LF L E+
Sbjct: 760 EKIYHRQIFKQFLTNKILK-DPKQRQTFQLSDLHDLFSLGED 800
>gi|281211032|gb|EFA85198.1| SNF2-related domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1376
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 171/500 (34%), Positives = 264/500 (52%), Gaps = 38/500 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q V++M+E + G I+ DEMGLGKT+Q I+ + +L L P
Sbjct: 600 LFEYQVTCVRWMWELHS-----QESGGIIGDEMGLGKTIQIISFLASLHYSKMLCGP--- 651
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILV 266
A+I+AP++L+ NW EI KW L + + +L + T G IL+
Sbjct: 652 -ALIIAPATLLSNWVKEIHKWWPPFRVILFHSSNNTKQTQKQLVETIATKGH-----ILL 705
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+YE R + +L K+ V+ DEGH+++N ++ ++ R++LSG+PIQN L
Sbjct: 706 TTYEGVRINQDILLKHHWEYVILDEGHKIRNPDADITLSVKQFPTCHRIILSGSPIQNKL 765
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E +SL F+ G LGT F Q+ PI G + AS + A + L +++ +
Sbjct: 766 TELWSLFDFIFPGKLGTLPIFMSQFSVPINLGGYANASSLQVQTAYKCAVALRDLISPYM 825
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RR A + + LP K EQV+ +T Q+ LY + S+ + M G +N L +
Sbjct: 826 LRRVKADVLQSLPSKNEQVLLCPLTPFQERLYMKFLSSNEAKDVMDGKKN------LLYA 879
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
I LKK+CNHPD+ ++ G +E S+KL V+ +L
Sbjct: 880 IDILKKICNHPDI---------------LHKDDDDKDKPDDYGN--VERSSKLKVVQEIL 922
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE 566
+ + K++L Q LD+ E K Y+Y R+DG+ +IK R +VE FN
Sbjct: 923 PMWQQQ-GHKVLLFCQTRQMLDIVEEFIKNSNYQYRRMDGTTSIKVRQTLVEEFNNDPIL 981
Query: 567 FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
FIF+L++K GG G+NL GANR+++FDPDWNP+ D QA RV+R GQKK +YR ++TG+
Sbjct: 982 FIFLLTTKVGGLGINLTGANRVILFDPDWNPSTDIQARERVYRIGQKKTVTIYRLMTTGT 1041
Query: 627 IEEKMMQRQAHKKALSSCVV 646
IEEK+ RQ +K+ LS+ ++
Sbjct: 1042 IEEKIYHRQIYKQFLSNKIL 1061
>gi|171687146|ref|XP_001908514.1| hypothetical protein [Podospora anserina S mat+]
gi|170943534|emb|CAP69187.1| unnamed protein product [Podospora anserina S mat+]
Length = 1197
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 296/570 (51%), Gaps = 60/570 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 418 YQKTGVQWLAELYA-----QQVGGIVGDEMGLGKTVQLISFVAALHYSKMLNKPVI---- 468
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALP---------IDGGSKAEIDNKLNSFMQTYGRR 259
+VAP+++++ W NE +W RV+ L +D G K ++++ + +
Sbjct: 469 VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMFNVLDEGKKEDVEDNWDKKSPAKSSK 528
Query: 260 PVNPI----------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
I LV +Y +++ VL E G + DEGH+++N + L
Sbjct: 529 AAKKIVDKVVKHGHVLVTTYAGLQTYGDVLIPVEWGYAVLDEGHKIRNPNTAITIYCKEL 588
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ R++LSGTP+QN+L E +SL F+ LGT FR Q+E PI G + A++ +
Sbjct: 589 RTPNRIILSGTPMQNNLTELWSLFDFIFPMRLGTLVSFRTQFEVPIKLGGYANATNLQIM 648
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
A + E L ++ L++R ++ LP K+EQV+ K++ Q+E Y +KSD +
Sbjct: 649 TAQKCAETLKEAISPYLLQRLKVDVAADLPKKSEQVLFCKLSKPQREAYELFLKSDEMAS 708
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ + L I L+K+CNHPDL+ +++ Y G
Sbjct: 709 ILDRSRQS------LYGIDILRKICNHPDLLNPRLKN----------------EPGYLWG 746
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSM 548
+E S K+ V+ ++L + K K +L S TQ LD+ E +L +Y+R+DG
Sbjct: 747 S--VEKSGKMAVVQSLLPMWKRLGH-KTLLFSQGTQMLDIIEAFVQRLDDVRYLRMDGKT 803
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
IK+R +V+ FN + +F+L++K GG G+NL GANR+++FDPDWNP+ D QA R W
Sbjct: 804 PIKQRQTLVDQFNNDPSLDVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAW 863
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQL 667
R GQK+ +YR ++ G+IEEK+ RQ K+ LS+ V+ D ++ +F++++L LF L
Sbjct: 864 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQT--NFNLNDLHDLFSL 921
Query: 668 E--ENTISDTHDKIKCSRCVNGIQVKPPPL 695
E+ +++T K S N ++ P L
Sbjct: 922 SSYEDGMTETSQLFKGSEAKNFMKSGPKEL 951
>gi|328698146|ref|XP_001952559.2| PREDICTED: DNA excision repair protein ERCC-6 [Acyrthosiphon pisum]
Length = 1136
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 285/542 (52%), Gaps = 51/542 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCIT----LMWTLLRQGPLAK 202
L +Q+ G+K+++E + G I+ DEMGLGKT+Q I L W+ L+
Sbjct: 289 LYKYQKIGIKWLWELH-----QQGSGGILGDEMGLGKTIQMIVFFGALYWSRLKDKITGI 343
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
+ ++IV P++L+ W E KW RV L G K + + + + G
Sbjct: 344 RGLGPSLIVCPATLMHQWVEEFHKWCPPIRVVVLHETGVYKGKPGDLIKEVWSSKG---- 399
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
IL+ +Y H + L KN V+ DEGH+++N +S+ A LK+ R+++SG+P
Sbjct: 400 --ILITTYNGLLQHINNLLKNNWHYVILDEGHKIRNPDSKITVAAKQLKSSHRIIISGSP 457
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQN L E +SL F+ LGT F K + PI G + A++ + T A + L
Sbjct: 458 IQNHLKELWSLFDFIFPSKLGTLPAFIKSFAVPITHGGYANATELQITTAYKCATILKDT 517
Query: 382 VNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIK-SDAVRRTMKGGENTK 438
++ L+RR A + + LP K EQV+ ++T+ QK +Y ++ SD + M G
Sbjct: 518 ISPYLLRRMKADIQSHISLPDKNEQVLFCRLTEEQKTMYRGYLEHSDIISEIMNGSCKVF 577
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAK 498
+G I+ L+ +CNHPD+ ++TGA G+ KSGK++
Sbjct: 578 VG------ISRLRTICNHPDIFQTNLETGAFGYWK-------------KSGKMI------ 612
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
V++ +L + K +++L + + L++F++ + Y Y++L+G+ +I R ++
Sbjct: 613 --VVEALLKMWK-KQGHRVLLFTQSVKMLNIFQKFIIEQNYSYLKLEGATSIGSRQPIIN 669
Query: 559 TFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
FNK + F+ +L++K GG G+NLIGA+R+++FDPDWNPA D QA R WR GQ +
Sbjct: 670 KFNKDPSIFVMILTTKVGGLGVNLIGADRVIIFDPDWNPATDLQARERAWRIGQTNSVTI 729
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE---ENTISDT 675
YR L+ G+IEEK+ RQ K+ LS+ V+ + R F + L LF L+ +N + +T
Sbjct: 730 YRLLTAGTIEEKIYHRQIFKQFLSNKVL-VDPKQRRFFKSNYLYELFTLQDVDDNGVVET 788
Query: 676 HD 677
D
Sbjct: 789 TD 790
>gi|449018067|dbj|BAM81469.1| DNA repair and recombination protein RAD26 [Cyanidioschyzon merolae
strain 10D]
Length = 917
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 175/540 (32%), Positives = 272/540 (50%), Gaps = 49/540 (9%)
Query: 147 LRPHQREGVKFMYEC-VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
L P+Q+EG+ +++ V G G I+ DEMGLGKT+Q I + L G L P++
Sbjct: 187 LFPYQKEGLVWLWSLHVQGT------GGILGDEMGLGKTVQIIAFLAALDYSGLLKGPIL 240
Query: 206 DKAIIVAPSSLVKNWCNEITKW---LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+VAP +++ W E+ W L RV + G A N+ P
Sbjct: 241 ----VVAPVTVLDQWRRELETWWPRLQVRVLHAVLGIGESALQPNQC----------PSQ 286
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
I + +YE R HAS V+ DEGHR++N E++ + L R+L++G P+
Sbjct: 287 VIFITNYEHLRIHASWFTSRRWDYVILDEGHRIRNPEAEVTRVCKQLNTVHRILMTGAPL 346
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN L E +SL F+ G LGT Q F +++ PI G + A+ A+ A L ++
Sbjct: 347 QNRLCELWSLFDFIYPGRLGTLQSFEEEFSIPISLGGFANATPAQVHIAYRCASTLRDLI 406
Query: 383 NRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT 442
L+RR ++ LP K E V+ ++T Q+ +Y N + + V R G N
Sbjct: 407 APYLLRRLKRDVALQLPQKQEHVLLCRLTPEQRRIYQNYLNAIDVERAADGQLNL----- 461
Query: 443 ALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVL 502
L IT+L+K+CNHP L + G E + L S KL+ L
Sbjct: 462 -LPIITTLRKICNHPRLAAADLHVS--GSERKL---------------LRQSTSGKLLAL 503
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D +L ++ T+ + ++ S L L E+ + Y+R+DG + RA++V+ FN
Sbjct: 504 DRLLHQLR-ETNHRALIFSQTRSMLTLLEKTLNKGQFTYLRMDGETNVALRAELVDRFNH 562
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
S+ F F+L+++ GG GLNLIGA+R++++DPDWNPA+D QA R WR GQ++P VYR L
Sbjct: 563 DSSIFAFLLTTRVGGLGLNLIGADRVIIYDPDWNPASDTQARERAWRIGQERPVVVYRLL 622
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+ G+IEEK+ RQ K LS V+ + R F ++ L L E+ + +++ +
Sbjct: 623 TRGTIEEKIYHRQIFKTFLSEKVLH-DPRKRRFFKRKDIHELLTLHEDATDEDFVQVQAT 681
>gi|212536498|ref|XP_002148405.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces marneffei
ATCC 18224]
gi|210070804|gb|EEA24894.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces marneffei
ATCC 18224]
Length = 1157
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 290/562 (51%), Gaps = 62/562 (11%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
IL +Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 368 ILFDYQKTGVQWLWELY-----QQQVGGIIGDEMGLGKTIQVISFLAGLHHSRKLTKPVI 422
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFM----- 253
+VAP++++K W E +W RV+ L G +++ +N LN M
Sbjct: 423 ----VVAPATVMKQWVTEFHRWWPPFRVSILHTSGSGMINVRNESNRENALNDEMWDPSR 478
Query: 254 -------QTYGRRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
Q ++ V +LV +Y +++A VL + + DEGH+++N +
Sbjct: 479 PYTMTKAQKTAKKIVQRVVEEGHVLVTTYSGLQTYAPVLIPVDWDCAILDEGHKIRNPNT 538
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
L+ R++LSGTP+QN+L E +SL FV LGT +FR Q+E PI +G
Sbjct: 539 SITIHCKELRTPHRLILSGTPMQNNLSELWSLFDFVFPMRLGTLVDFRNQFEFPIRQGGY 598
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ AS+ + A E L ++ L++R ++ LP K+EQV+ K++ LQ++ Y
Sbjct: 599 ANASNLQVQTAARCAETLKEAISPYLLQRFKVDVASDLPKKSEQVLFCKLSPLQRKAYEQ 658
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
+ S + G G + L+K+CNHPDLV K+ + T
Sbjct: 659 FLNSQECNSILAGRRQVLYG------VDMLRKICNHPDLVTHKLFSAT-----------T 701
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGY 539
GY KSGK+ V+ +L + + T K +L + + L++ E+ + L G+
Sbjct: 702 GYGEPSKSGKM--------KVVKALLELWR-DTGHKTLLFAQHRIMLNILEKFVNTLSGF 752
Query: 540 KYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
Y R+DG I +R +V+ FN + + +F+L++K GG G+NL GA+R++++DPDWNP+
Sbjct: 753 NYRRMDGETPIHRRQLLVDEFNNSPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPST 812
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D QA R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ V+ + + F MS
Sbjct: 813 DMQARERAWRLGQKREVAIYRLMTAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFEMS 871
Query: 660 ELRSLFQLEENTISDTHDKIKC 681
L LF L E ++T K
Sbjct: 872 NLHDLFSLGEEGQTETSSMFKT 893
>gi|344303600|gb|EGW33849.1| hypothetical protein SPAPADRAFT_133417 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1042
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 176/559 (31%), Positives = 288/559 (51%), Gaps = 72/559 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 271 LFDYQKTCVQWLWELYS-----QKTGGIIGDEMGLGKTIQIISFIAGLHYSGLLDKPVL- 324
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAE--IDNKLNSFMQTYG------ 257
+V P++++ W NE KW R L G E + KL SF++T+
Sbjct: 325 ---VVVPATVLNQWVNEFHKWWPPLRCIILHSIGSGMGEKVSEEKLESFLETHDPHASTS 381
Query: 258 -----RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+ +N +L+ +Y R ++ + E G V+ DEGH+++N +S
Sbjct: 382 SLRGIKSQINAQEIIDRVMEKGHVLITTYVGLRIYSKHILPREWGYVILDEGHKIRNPDS 441
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
+K R++LSGTPIQN+L+E +SL F+ G LGT F++Q+ PI G
Sbjct: 442 DISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFIFPGRLGTLPVFQQQFSIPINMGGY 501
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ AS+ + + L ++ L+RR + +++ LP K E V+ +K+T +Q++LY
Sbjct: 502 ANASNVQVQTGYKCAVILRDLITPYLLRRLKSDVAQDLPKKNEMVLFVKLTRIQQDLYEK 561
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
+ S+ + +KG N +G + L+K+CNHPDL+ +I G+
Sbjct: 562 FLHSEELNSILKGKRNVLMG------VDMLRKICNHPDLINREILMYKKGY--------- 606
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL------- 533
Y KSGK+ VL +L + + + + K +L Q LD+ E+
Sbjct: 607 NYGNPAKSGKM--------QVLKNLLQLWQ-SQNHKTLLFCQTRQMLDILEKFVANLHVL 657
Query: 534 ----SKLRGY-KYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRL 588
+ GY Y+R+DG I KR +V+ FN + +F+L++K GG G+NL GA+R+
Sbjct: 658 DEEGNDSTGYFNYLRMDGGTPISKRQTLVDKFNTDLTQHVFLLTTKVGGLGVNLTGADRV 717
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
+++DPDWNP+ D QA R WR GQK+ +YR ++TGSIEEK+ RQ K L++ ++
Sbjct: 718 IIYDPDWNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILK- 776
Query: 649 EEDVARHFSMSELRSLFQL 667
+ R F +++L LF L
Sbjct: 777 DPKQRRFFKINDLHDLFTL 795
>gi|330801436|ref|XP_003288733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
gi|325081209|gb|EGC34733.1| hypothetical protein DICPUDRAFT_153008 [Dictyostelium purpureum]
Length = 1544
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 178/521 (34%), Positives = 278/521 (53%), Gaps = 43/521 (8%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q GV+++YE + ++A G I+ DEMGLGKT+Q ++ + +L L P
Sbjct: 727 LFEYQVTGVRWLYE----LHCQEA-GGIVGDEMGLGKTIQIVSFLASLHYSRRLGGP--- 778
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILV 266
A+IVAP++L+ NW E KW L S D+ + + + G IL+
Sbjct: 779 -ALIVAPATLLSNWVKEFHKWWPPFRVGLFHSSSSSLSKDDIVKK-IASKGH-----ILL 831
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
++E R H +L ++ V+ DEGH+++N +++ + + R++LSG+PIQN L
Sbjct: 832 TTFEQIRIHQDILLEHHWDYVILDEGHKIRNPDAEVTLSCKQFQTCHRIILSGSPIQNKL 891
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E +SL FV G LGT F+ Q+ PI G + AS + A + L +++ +
Sbjct: 892 TELWSLFDFVYPGKLGTLPIFKTQFSLPISVGGFANASPIQVQTAYKCAVALRDLISPYM 951
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RR A + K LP K EQV+ +T+ Q++LY + S+ ++ ++G N AL
Sbjct: 952 LRRIKADVLKSLPSKNEQVLMCPLTNFQEKLYLEFLDSNDIKSVLEGRRN------ALYG 1005
Query: 447 ITSLKKLCNHPDLV-MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
I LKK+ NHPD++ MD P Y I SAKL V+D +
Sbjct: 1006 IDILKKISNHPDILHMDPHDEDR----------PEDYGN--------INRSAKLRVVDQI 1047
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFE-RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
L + DK++L Q LD+ E + + Y+R+DG+ ++K R +VE FN
Sbjct: 1048 LPLW-YKQGDKVLLFCQTRQMLDIVEAYIRNSTTFNYLRMDGTTSVKHRQSLVEEFNLDE 1106
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
FIF+L++K GG GLNL GANR+++FDPDWNP+ D QA RV+R GQKK +YR ++
Sbjct: 1107 KLFIFLLTTKVGGLGLNLTGANRVILFDPDWNPSTDTQARERVYRIGQKKSVTIYRLVTL 1166
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
G+IEEK+ RQ +K+ L++ ++ + R F + LF
Sbjct: 1167 GTIEEKIYHRQIYKQFLTNKIL-KDPRQKRFFKSKHFKELF 1206
>gi|398408155|ref|XP_003855543.1| SNF2 family DNA repair and recombination protein, partial
[Zymoseptoria tritici IPO323]
gi|339475427|gb|EGP90519.1| SNF2 family DNA repair and recombination protein [Zymoseptoria
tritici IPO323]
Length = 1207
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 174/542 (32%), Positives = 287/542 (52%), Gaps = 58/542 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 402 YQKTGVQWLWELFS-----QQVGGIIGDEMGLGKTIQIISFLAGLHYSNKLTKPII---- 452
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS------KAEIDNKL--NSFMQ------ 254
+V P++++K W NE +W RV+ L G + +++L +SF +
Sbjct: 453 VVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDLRRETSFEDELEEDSFQRKRTHSK 512
Query: 255 --TYGRRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+R +N +LV +Y +++A +L + + DEGH+++N +
Sbjct: 513 GYNSAKRILNRVVRDGHVLVTTYSGLQTYAELLIPTDWEYAVLDEGHKIRNPNTSITIFC 572
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L+ RV+LSGTP+QN+L E +SL FV LGT F+ Q+E PI +G + AS+
Sbjct: 573 KELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKSQFEVPIKQGGYANASNL 632
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+ A + E L ++ L++R ++ LP K+E+V+ K+T LQ++ Y ++SD
Sbjct: 633 QVETAMKCAETLKDTISPYLLQRFKVDVAADLPKKSERVLFCKLTKLQRDAYEWFLRSDD 692
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
+ M G AL I L+K+CNHPDLV K + + Y
Sbjct: 693 MSSIMNGKRQ------ALYGIDILRKICNHPDLVEHKTLSKKTSY---------AYGTGS 737
Query: 487 KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLD 545
KSGK+ V+ +L + K K +L + + LD+ E + ++G+ Y R+D
Sbjct: 738 KSGKM--------QVVKALLEIWKRNGH-KTLLFAQHRIMLDILESFIQGMKGFNYRRMD 788
Query: 546 GSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
G+ +IK R +V+ FNK N +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 789 GNTSIKDRQDLVDEFNKDQNLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARE 848
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F + +L LF
Sbjct: 849 RAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFHLKDLHDLF 907
Query: 666 QL 667
L
Sbjct: 908 TL 909
>gi|391873750|gb|EIT82758.1| transcription-coupled repair protein CSB/RAD26 [Aspergillus oryzae
3.042]
Length = 1196
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 276/522 (52%), Gaps = 54/522 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L KP+I IV P++++K W NE +W
Sbjct: 423 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTKPVI----IVCPATVMKQWVNEFHRWWPPF 478
Query: 231 RVAALPIDGGSKAEIDNKLNS----FMQTY-----------GRRPV------NPILVISY 269
RV+ L G I N+ + QT+ GR+ V +LV +Y
Sbjct: 479 RVSILHTSGSGMVNIRNESSREDALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTY 538
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
+++ +L E G + DEGH+++N + L+ R++LSGTP+QN+L E
Sbjct: 539 SGLQTYTPLLIPVEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTEL 598
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
+SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L++R
Sbjct: 599 WSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQR 658
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LP K+EQV+ K+T LQ++ Y + + S+ ++ ++G G +
Sbjct: 659 FKIDVAADLPKKSEQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYG------VDI 712
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
L+K+CNHPDL K+ + G+ N + S K+ V+ ++L +
Sbjct: 713 LRKICNHPDLQSHKLTSHKAGYGNP-------------------DKSGKMQVVKSLLELW 753
Query: 510 KMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
K T K +L + + LD+ ++ L G+ Y R+DG+ I R +V+ FN + +
Sbjct: 754 K-DTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHV 812
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G+IE
Sbjct: 813 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIE 872
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
EK+ RQ K+ L++ ++ + + F +S+L LF L E+
Sbjct: 873 EKIYHRQIFKQFLTNKILK-DPKQRQTFQLSDLHDLFSLGED 913
>gi|317156769|ref|XP_001825991.2| DNA repair protein Rhp26/Rad26 [Aspergillus oryzae RIB40]
Length = 1192
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 276/522 (52%), Gaps = 54/522 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L KP+I IV P++++K W NE +W
Sbjct: 419 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTKPVI----IVCPATVMKQWVNEFHRWWPPF 474
Query: 231 RVAALPIDGGSKAEIDNKLNS----FMQTY-----------GRRPV------NPILVISY 269
RV+ L G I N+ + QT+ GR+ V +LV +Y
Sbjct: 475 RVSILHTSGSGMVNIRNESSREDALLSQTWDSRRSLGGLKAGRKVVKRVVEEGHVLVTTY 534
Query: 270 ETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEY 329
+++ +L E G + DEGH+++N + L+ R++LSGTP+QN+L E
Sbjct: 535 SGLQTYTPLLIPVEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNLTEL 594
Query: 330 FSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRR 389
+SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L++R
Sbjct: 595 WSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYLLQR 654
Query: 390 TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITS 449
++ LP K+EQV+ K+T LQ++ Y + + S+ ++ ++G G +
Sbjct: 655 FKIDVAADLPKKSEQVLFCKLTKLQRQAYKSFLGSEEMQSILRGRRQVLYG------VDI 708
Query: 450 LKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
L+K+CNHPDL K+ + G+ N + S K+ V+ ++L +
Sbjct: 709 LRKICNHPDLQSHKLTSHKAGYGNP-------------------DKSGKMQVVKSLLELW 749
Query: 510 KMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
K T K +L + + LD+ ++ L G+ Y R+DG+ I R +V+ FN + +
Sbjct: 750 K-DTGHKTLLFAQHRIMLDILQKFVESLSGFNYRRMDGTTPIAHRQSMVDEFNNNPDLHV 808
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G+IE
Sbjct: 809 FLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAGTIE 868
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
EK+ RQ K+ L++ ++ + + F +S+L LF L E+
Sbjct: 869 EKIYHRQIFKQFLTNKILK-DPKQRQTFQLSDLHDLFSLGED 909
>gi|358399258|gb|EHK48601.1| hypothetical protein TRIATDRAFT_53490 [Trichoderma atroviride IMI
206040]
Length = 1133
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 285/539 (52%), Gaps = 51/539 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + + G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 376 YQKTGVQWLAELY-----KQSVGGIIGDEMGLGKTVQLIAFIAALHYSKKLKKPVI---- 426
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVN 262
+VAP++L++ W +E +W RV+ L G ++ E D + S M T +
Sbjct: 427 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDEYDVEHFSPMATKSEKAAR 486
Query: 263 PI----------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
I LV +Y +++A L E + DEGH+++N ++ L
Sbjct: 487 KIVKGVVQKGHVLVTTYTGLQTYADELLHVEWDYAVLDEGHKIRNPNAEITVTCKELNTP 546
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT F++Q+E PI +G + AS+ + A
Sbjct: 547 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQGGYANASNLQVMTAE 606
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+T+ Q++ Y I SD V +
Sbjct: 607 KCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTESQRKAYERFIGSDEVAAIL- 665
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
N K +L I L+K+CNHPDL +DK LP+ Y KL
Sbjct: 666 ---NRK--RQSLYGIDILRKICNHPDL-LDKS-------------LPSKPGYDYGDPKL- 705
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
SAKL + +L + + K++L S Q L++ E+ + G Y+R+DG I +
Sbjct: 706 ---SAKLQLTKDLLQKVMIPNGHKMLLFSQGKQMLNIIEKCIRECGISYLRMDGETPIDQ 762
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 763 RQPMIDKFNTDPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 822
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF +++T
Sbjct: 823 SKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLFTFDKHT 880
>gi|358379983|gb|EHK17662.1| hypothetical protein TRIVIDRAFT_160093 [Trichoderma virens Gv29-8]
Length = 1133
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 173/539 (32%), Positives = 282/539 (52%), Gaps = 51/539 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 376 YQKTGVQWLAELY-----KQNVGGIIGDEMGLGKTVQLIAFIAALHYSKKLKKPVI---- 426
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSF--MQTYGRRPVN 262
+VAP++L++ W +E +W RV+ L G AE D + F M T +
Sbjct: 427 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPAAEDDYDVEHFSPMATKSEKAAR 486
Query: 263 PI----------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
I LV +Y +++A +L E + DEGH+++N ++ L
Sbjct: 487 KIVRGVVQKGHVLVTTYTGLQTYADLLLGVEWDYAVLDEGHKIRNPNAEITVTCKELNTP 546
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
R++LSGTPIQN+L E +SL F+ LGT F++Q+E PI +G + AS+ + A
Sbjct: 547 NRLILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQGGYANASNLQVMTAE 606
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+T+ Q++ Y ++SD V +
Sbjct: 607 KCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTEGQRKAYETFLRSDEVSAILN 666
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ G I L+K+CNHPDL +DK Y Y+ G
Sbjct: 667 RTRQSLYG------IDILRKICNHPDL-LDK---------------SLAYKPGYEVGN-- 702
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
++SAKL + +L + + K +L S Q L++ E+ + G Y+R+DG I +
Sbjct: 703 PKMSAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCIRNCGITYLRMDGETPIDQ 762
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 763 RQPMIDKFNSDPDIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 822
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF ++NT
Sbjct: 823 NKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLFTFDKNT 880
>gi|389582103|dbj|GAB64503.1| DNA repair protein rhp54, partial [Plasmodium cynomolgi strain B]
Length = 712
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 244/407 (59%), Gaps = 33/407 (8%)
Query: 71 LAKPFKVPILNYTGGG--YSTKALG--VRREG---------ARKA----LHDPTAPNALV 113
L PFK P+ + Y K LG VRR G R++ +++ N +
Sbjct: 44 LFHPFKSPLPGFVSDKNLYVQKTLGAKVRRTGWINLTKNSIPRRSDETEINEQKKENEIK 103
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
P + D +K+K++V DP+L+ LR HQREGV F++EC+ +R + GC
Sbjct: 104 NEFIPLILYED----EKNKVEV----DPILAQFLREHQREGVTFVFECLMNLRDDKISGC 155
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
I+AD+MGLGKTLQ I++++TLL+QG KP + + +I+ P+SL+ NW +EI KWL GR
Sbjct: 156 ILADDMGLGKTLQSISVLYTLLKQGIDKKPAVRRCLILCPASLINNWNDEINKWLPGRCN 215
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
++ +K +I +KL F Y ++ +++ SYE FR + L K+ + +++CDE H
Sbjct: 216 VTCVNDNAKEKIVSKLEGF--KYDQKST--VIICSYECFRINNESLDKSTIDMIICDEAH 271
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN +++TY ++ L A++R+LLSGTPIQNDL E+F+L+ N + FRK+Y
Sbjct: 272 RLKNDKTKTYMSIYKLTARKRLLLSGTPIQNDLSEFFALISLCNPDLFDDTNLFRKKYAN 331
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
PIL G+D A++ E+ A+ERL +L I N+ ++RRT+ LLSK LPVK + IK+ +
Sbjct: 332 PILIGRDKDATEKEQEIASERLAELSTITNKFILRRTNNLLSKVLPVKYLINIFIKLNPI 391
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
Q+ LY +K ++ +K ++T + L +I L+K+CNHP L+
Sbjct: 392 QESLYVLFLKD---KKILKNEQSTN-KVNVLINIKKLEKICNHPLLL 434
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/152 (59%), Positives = 115/152 (75%)
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
+S K +L +L IK T DK+V+VSNYTQTLD E L K YK+VRLDG ++IKKR
Sbjct: 547 MSCKFQLLHFLLKTIKQNTTDKVVIVSNYTQTLDYMEILCKENFYKFVRLDGGISIKKRH 606
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
KV+ F +S+ FIF+LSSK+GGCG+NLI +NRL++ DPDWNPAND QA+ARVWR+GQKK
Sbjct: 607 KVINDFTHSSDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKK 666
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
C++YR TG+I+EK+ QRQ K LSS +V
Sbjct: 667 ICYIYRLFCTGTIDEKVYQRQISKDGLSSMIV 698
>gi|315041194|ref|XP_003169974.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
118893]
gi|311345936|gb|EFR05139.1| DNA repair and recombination protein RAD26 [Arthroderma gypseum CBS
118893]
Length = 1226
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/563 (31%), Positives = 293/563 (52%), Gaps = 63/563 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + + L P+ I
Sbjct: 400 YQKTGVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPI----I 450
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVN 262
+V P +++K W NE +W RV+ L G S+++ +++ S + +G R
Sbjct: 451 VVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGV--WGDRNAT 508
Query: 263 P-------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y ++++S+L + G+ + DEGH+++N ++
Sbjct: 509 SQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSIT 568
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + A
Sbjct: 569 IHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFELPIRTGGYANA 628
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y +
Sbjct: 629 SNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPKKSEQVLFCKLTKVQRAAYEAFLA 688
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S + ++G AL I L+K+CNHPDL KI + + Y
Sbjct: 689 SGEMSSILRGRRE------ALYGIDMLRKICNHPDLTQHKILSQKTDYN---------YG 733
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYV 542
+ KSG K+ V+ ++L + K T K +L + + LD+ ER + G+ Y
Sbjct: 734 SGAKSG--------KMQVVKSLLELWK-ETGHKTLLFAQHRIMLDILERFIRGFDGFNYR 784
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 785 RMDGNTPIKARQSMVDEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDMQ 844
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++
Sbjct: 845 ARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDIQ 903
Query: 663 SLFQLEENTISDTHDKIKCSRCV 685
LF L + ++T K + V
Sbjct: 904 DLFTLGNDGPTETSQMFKDADVV 926
>gi|241959152|ref|XP_002422295.1| ATP-dependent helicase, putative; DNA repair and recombination
protein rad26 homologue, putative [Candida dubliniensis
CD36]
gi|223645640|emb|CAX40300.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1054
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/553 (32%), Positives = 295/553 (53%), Gaps = 68/553 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E T G I+ DEMGLGKT+Q I+ + L G L KP+
Sbjct: 274 LFDYQKTCVQWLWELYT-----QKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLDKPV-- 326
Query: 207 KAIIVAPSSLVKNWCNEITKW---LGGRVAALPIDGGSKAEIDNKLNSFMQT-------- 255
+IV P++++ W NE +W L + G S A ++KL ++++
Sbjct: 327 --LIVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMSGAVSESKLEEYLESTDPDSTQS 384
Query: 256 --YG-RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+G + +N +LV +Y R ++ + E G V+ DEGH+++N +S
Sbjct: 385 SLHGIKSQINAQEIIDRVMEKGHVLVTTYVGLRIYSKHILPREWGYVVLDEGHKIRNPDS 444
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
+K R++LSGTPIQN+L+E +SL FV G LGT F++Q+ PI G
Sbjct: 445 DISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQQFSIPINIGGY 504
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ +++ + A + L +++ ++RR + +++ LP K E V+ +K+T +Q+ELY +
Sbjct: 505 ANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYES 564
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
++S+ + +KG N +G + L+K+CNHPDLV D N
Sbjct: 565 FLQSEDLESILKGKRNVLMG------VDILRKICNHPDLVY------RDTLMKKKN---- 608
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER----LSKL 536
Y KSG K+ VL +L + + + K +L Q LD+ E+ LS +
Sbjct: 609 -YGDPAKSG--------KMQVLKNLLRLWQH-ENHKTLLFCQTRQMLDILEKFVANLSLI 658
Query: 537 RG--YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
G +KY+R+DGS I KR +V+ FN+ + +F+L++K GG G+NL GA+R++++DPD
Sbjct: 659 NGGDFKYLRMDGSTPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPD 718
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNP+ D QA R WR GQK+ +YR ++TGSIEEK+ RQ K L++ ++ + R
Sbjct: 719 WNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILK-DPKQRR 777
Query: 655 HFSMSELRSLFQL 667
F ++L LF L
Sbjct: 778 FFKANDLHDLFTL 790
>gi|124512694|ref|XP_001349480.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7]
gi|23499249|emb|CAD51329.1| DNA repair protein rad54, putative [Plasmodium falciparum 3D7]
Length = 1239
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 153/401 (38%), Positives = 238/401 (59%), Gaps = 23/401 (5%)
Query: 71 LAKPFKVPILNYTGGG--YSTKALGV--RREG----ARKALHDPTAPNALVLYTPPQLSA 122
L PFK P+ + Y K LGV RR G + ++ + +
Sbjct: 50 LFHPFKNPLPGFVSDKTLYLKKTLGVKVRRTGWINLMKNSIPRRSDETEEQEKIEEVIKK 109
Query: 123 HD---LLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEM 179
H+ L K + DKI+V DP+L+ LR HQREGV+F++EC+ ++ + GCI+AD+M
Sbjct: 110 HEPLILYKDENDKIEV----DPILAQYLREHQREGVQFVFECLMNIKDDKISGCILADDM 165
Query: 180 GLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG 239
GLGKTLQ IT+++TLL+QG K + + +I+ P+SL+ NW +EI+KW+ R ++
Sbjct: 166 GLGKTLQSITVLYTLLKQGFHKKCAVRRCLILCPASLINNWNDEISKWIPNRCNVTCVND 225
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
+K +I +KL F Y + +L+ SYE FR + L K+ + +++CDE HRLKN +
Sbjct: 226 NAKEKIVSKLEGF--KYDIQST--VLICSYECFRINNEFLDKSSIDMIICDEAHRLKNDK 281
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
++TY ++ L AK+R+LLSGTPIQNDL E+++L+ N + FRK++ PIL G+
Sbjct: 282 TKTYTSIYNLTAKKRLLLSGTPIQNDLGEFYALISLCNPDLFDDINLFRKKFANPILIGR 341
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
D A++ E+ A+ERL +L I N+ ++RRT+ LLSK LPVK + IK+ +Q+ LY
Sbjct: 342 DKDATEKEQEIASERLTELSNITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYV 401
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
+K + + +NT + L +I L+K+CNHP L+
Sbjct: 402 LFLKDKKILK----NDNTNNKVNVLINIKKLEKICNHPLLL 438
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 99/181 (54%), Positives = 132/181 (72%), Gaps = 1/181 (0%)
Query: 509 IKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI 568
IK T+DK+V+VSNYTQTLD E L K YK+VRLDG + IKKR KV+ F +++ FI
Sbjct: 622 IKQNTNDKVVIVSNYTQTLDYMEILCKENMYKFVRLDGGINIKKRHKVINDFTHSADIFI 681
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSK+GGCG+NLI +NRL++ DPDWNPAND QA+ARVWR+GQKK C++YR TG+I+
Sbjct: 682 FLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKKICYIYRLFCTGTID 741
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNG 687
EK+ QRQ K LS+ +V S ++ LF + NT+S+THD I+C+RC +NG
Sbjct: 742 EKVYQRQISKDGLSNMIVTTTNLSKDQMSDENVKKLFNYKMNTVSETHDNIECNRCNLNG 801
Query: 688 I 688
+
Sbjct: 802 V 802
>gi|405953464|gb|EKC21121.1| DNA excision repair protein ERCC-6 [Crassostrea gigas]
Length = 1410
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 281/528 (53%), Gaps = 44/528 (8%)
Query: 150 HQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL--- 204
+QR GV +++E C + G I+ DEMGLGKT+Q I + LRQ LA
Sbjct: 446 YQRVGVSWLWELHCQSA-------GGIIGDEMGLGKTIQMIAFL-AALRQSKLASKHFKY 497
Query: 205 --IDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
+ IIV P++++ W E KW RVA L G ++ + S ++ G
Sbjct: 498 CGLGPVIIVTPTTVMSQWVKEFHKWWPLFRVAILHSSGSFTGAEEDLIWSIVKDRG---- 553
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ S+ T H + + V+ DEGH+++N ++Q QA + R++LSG+P
Sbjct: 554 --VLITSFTTLVVHQDKVLPYDWHYVVLDEGHKIRNPDAQVTQACKQFRTPHRIILSGSP 611
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQN+L E +SL FV G LGT +F + + PI++G + A++ + A + L
Sbjct: 612 IQNNLKELWSLFDFVFPGKLGTLPDFLQHFSIPIVQGGYANATEIQVQTAYKCACVLRDT 671
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + LP K EQV+ ++TD Q+++Y ++S + + G
Sbjct: 672 INPYLLRRMKADVKIDLPSKNEQVLFCRLTDEQRDVYLEYLQSRECQAILSGK------Y 725
Query: 442 TALSSITSLKKLCNHPDLVMD--KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
+ + +L+K+CNHPD+ K+ G D L GY + S K+
Sbjct: 726 QIFAGLITLRKICNHPDICTGGPKLLIGED--TQGDPTLEYGY----------WKRSGKM 773
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
+V++ +L + K +++L S LD+FE + + Y Y+R+DG I R ++ T
Sbjct: 774 IVVEALLKLWKQQGH-RVLLFSQSRAMLDIFESFVQNQKYCYLRMDGGTPISSRQALITT 832
Query: 560 FNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
+N+ + ++F+L+++ GG G+NL GANR+++FDPDWNP+ D QA R WR GQ K +Y
Sbjct: 833 YNQDPSIYLFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDTQARERTWRIGQTKQVTIY 892
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
R L++G+IEEK+ RQ K+ L++ V+ + R F ++L LF+L
Sbjct: 893 RLLTSGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFEL 939
>gi|346327353|gb|EGX96949.1| DNA repair protein Rhp26/Rad26 [Cordyceps militaris CM01]
Length = 1152
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/533 (33%), Positives = 280/533 (52%), Gaps = 51/533 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++M E G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 398 YQKTGVQWMAELYN-----QRVGGIVGDEMGLGKTVQLIAFVAALHSSKKLKRPVI---- 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSFM------QTYGR 258
+VAP++L++ W +E +W RV+ L G AE D L+ F R
Sbjct: 449 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPAAEDDYDLDHFRPMASKSANAAR 508
Query: 259 RPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R + +LV +Y +++A L K E + DEGH+++N ++ L
Sbjct: 509 RIIRGVVTKGHVLVTTYTGLQTYADELLKVEWEYAVLDEGHKIRNPNAEITVTCKELNTP 568
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTPIQN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 569 NRVILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFRAQFEIPIRQGGYANASNLQVMTAE 628
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+TD Q++ Y +KSD V +
Sbjct: 629 KCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTDGQRKAYETFLKSDEVAAIL- 687
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
N + +L I L+K+CNHPDL+ K+ A G+E Y S +L
Sbjct: 688 ---NRR--WQSLYGIDILRKICNHPDLLDKKLSQKA-GYE-------------YGSPRL- 727
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
S KL + +L + + K++L S L++ E+ + G Y+R+DG + +
Sbjct: 728 ---STKLQLTKDLLQNVMIPNGHKMLLFSQGKLMLNIIEKCMRDCGISYLRMDGETPVDQ 784
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 785 RQPMIDRFNNDPDVHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 844
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF
Sbjct: 845 NKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLF 896
>gi|150864673|ref|XP_001383607.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
gi|149385929|gb|ABN65578.2| DNA dependent ATPase [Scheffersomyces stipitis CBS 6054]
Length = 1067
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 187/592 (31%), Positives = 302/592 (51%), Gaps = 85/592 (14%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 279 LFDYQKTCVQWLWELYS-----QKTGGIIGDEMGLGKTIQVISFVAGLHYSGLLDKPVL- 332
Query: 207 KAIIVAPSSLVKNWCNEITKW-----------LGGRVAALPIDGGSKAEIDNKLNSFMQT 255
+V P++++ W NE +W +G + G S + KL F++
Sbjct: 333 ---VVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGM------GKSAVRSEEKLEEFLEN 383
Query: 256 Y-------GRRPVNP----------------ILVISYETFRSHASVLHKNEVGLVLCDEG 292
R +N +LV +Y R ++ + E G V+ DEG
Sbjct: 384 SDPTQSKNSLRGINSQINAKEIVDRVMEKGHVLVTTYVGLRIYSKHILPREWGYVVLDEG 443
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
H+++N +S +K R++LSGTPIQN+L+E +SL FV G LGT F++Q+
Sbjct: 444 HKIRNPDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQQFS 503
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PI G + AS+ + + L +++ L+RR + +++ LP K E V+ +K+T
Sbjct: 504 IPINMGGYANASNIQVQTGYKCAVILRDLISPYLLRRLKSDVAQDLPKKNEMVLFVKLTQ 563
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
+Q+ELY + S+ + +KG N +G + L+K+CNHPDLV D E
Sbjct: 564 VQQELYEKFLHSEELSSILKGRRNVLMG------VDILRKICNHPDLV------NRDILE 611
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
+ N Y KSGK+ VL +L + + + + K +L Q LD+ E+
Sbjct: 612 HKKNY---NYGNPVKSGKM--------QVLKNLLQLWQ-SQEHKTLLFCQTRQMLDILEK 659
Query: 533 L-SKLR-------GYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
+ LR + Y+R+DGS I KR +V+ FN N +F+L++K GG G+NL G
Sbjct: 660 FVANLRLLDIDHEYFTYLRMDGSTPIAKRQDLVDKFNSDPNLHVFLLTTKVGGLGVNLTG 719
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
A+R++++DPDWNP+ D QA R WR GQKK +YR ++TGSIEEK+ RQ K L++
Sbjct: 720 ADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLTNK 779
Query: 645 VVDCEEDVARHFSMSELRSLFQL-EENTI-SDTHDKIKCSRC-VNGIQVKPP 693
++ + R F +++L LF L ++N + ++T D S G + + P
Sbjct: 780 ILK-DPKQRRFFKVNDLHDLFTLGDQNEVGTETGDMFNGSETNFGGNKTRAP 830
>gi|242795848|ref|XP_002482676.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus
ATCC 10500]
gi|218719264|gb|EED18684.1| DNA repair protein Rhp26/Rad26, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1210
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 179/562 (31%), Positives = 291/562 (51%), Gaps = 62/562 (11%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L +Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 421 VLFDYQKTGVQWLWELY-----QQQVGGIIGDEMGLGKTIQVISFLAGLHHSRLLNKPVI 475
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFM----- 253
+VAP++++K W E +W RV+ L G S++ +N L + M
Sbjct: 476 ----VVAPATVMKQWVTEFHRWWPPFRVSILHTSGSGMINVRSESNRENALTNEMWDPSR 531
Query: 254 -------QTYGRRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
Q ++ V +LV +Y +++A VL + + DEGH+++N +
Sbjct: 532 PYTMTKAQKTAKKIVQRVVEEGHVLVTTYSGLQTYAPVLIPVDWDCAILDEGHKIRNPNT 591
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
L+ R++LSGTP+QN+L E +SL FV LGT +FR Q+E PI +G
Sbjct: 592 SITIHCKELRTPHRLILSGTPMQNNLSELWSLFDFVFPMRLGTLVDFRNQFEFPIRQGGY 651
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ AS+ + A E L ++ L++R ++ LP K+EQV+ K++ LQ++ Y
Sbjct: 652 ANASNLQVQTAARCAETLKDAISPYLLQRFKVDVASDLPKKSEQVLFCKLSPLQRKAYEQ 711
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
+ S G G + L+K+CNHPDLV K+ + T
Sbjct: 712 FLNSQECNSIFAGRRQVLYG------VDMLRKICNHPDLVTHKLFSTT-----------T 754
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGY 539
GY + KSGK+ V+ +L + K T K +L + + L++ E+ + L G+
Sbjct: 755 GYGDASKSGKM--------QVVKALLELWK-DTGHKTLLFAQHRIMLNILEKFVNTLSGF 805
Query: 540 KYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
Y R+DG I +R +V+ FN + + +F+L++K GG G+NL GA+R++++DPDWNP+
Sbjct: 806 NYRRMDGDTPIHRRQLLVDEFNNSPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPST 865
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D QA R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ V+ + + F MS
Sbjct: 866 DMQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFEMS 924
Query: 660 ELRSLFQLEENTISDTHDKIKC 681
L LF L E ++T + K
Sbjct: 925 NLHDLFSLGEEGQTETSNMFKT 946
>gi|432950140|ref|XP_004084404.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1121
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/574 (30%), Positives = 294/574 (51%), Gaps = 61/574 (10%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L +QREGV F+Y G+ + G I+AD+MGLGKT+Q I+ + G
Sbjct: 136 LHDKLYGYQREGVSFLY----GLYRDGRKGGILADDMGLGKTIQVISFL-----SGMYDN 186
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
LI +++ P+SL+ NW E ++W G RV G SKAE L + G
Sbjct: 187 ELIKHTLLIMPTSLITNWIKEFSRWTPGMRVKEF--HGASKAERTRSLEKVQRRSG---- 240
Query: 262 NPILVISYETFRSHASVLHKNE-----VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y ++ L + V+ DE H++KN S+T ++ + +K RVL
Sbjct: 241 --VVITTYNMLLNNWQQLSSYQGKEFCWDYVILDEAHKIKNTSSKTAKSAYAIPSKNRVL 298
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTP+QN+L E ++L F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 299 LTGTPVQNNLREMWALFDFACQGTLLGTGKTFKTEYENPITRAREKDATPGEKALGSRMS 358
Query: 376 EQLIGIVNRCLIRRTSALLSK---------------------------YLPVKTEQVVCI 408
+ L+ I+ +RRT A + + L K + +V
Sbjct: 359 DNLMAIIKPYFLRRTKAEVQRNELCEKEKLHSSAENQEDQPDPAAAMPQLKRKNDLIVWT 418
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
++ +Q+E+Y I D ++ + + L+ +T LKKLC+HP L+
Sbjct: 419 YLSAVQEEIYRQFIDLDCIKELLLTTR------SPLAELTVLKKLCDHPRLLSTDALARL 472
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
ENA + G A LI S KL L +L ++ + ++ ++Y + LD
Sbjct: 473 GLEENAADAAAHGIADV--PDHTLISESGKLAFLVALLERLR-EEGQRTLIFAHYRKVLD 529
Query: 529 LFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANR 587
+ ER+ RG+K +RLDG++T I +R +++ F K + +F+L+++ GG G+ L ANR
Sbjct: 530 IIERILNNRGFKVLRLDGTITQITERERLISLFQKDRSYSVFLLTTQVGGVGITLTAANR 589
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
+V++DP WNPA D QA+ R +R GQ + +YR ++ G++EEK+ +RQ K +L
Sbjct: 590 VVIYDPSWNPATDAQAVDRAYRIGQTENVVIYRLITCGTVEEKIYRRQVFKDSLIRQNTG 649
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+FS EL+ LF LE+ S T +++
Sbjct: 650 DKKNPFRYFSKQELKELFTLEDTRSSSTQLQLQA 683
>gi|302509748|ref|XP_003016834.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
gi|291180404|gb|EFE36189.1| hypothetical protein ARB_05127 [Arthroderma benhamiae CBS 112371]
Length = 1220
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 293/563 (52%), Gaps = 63/563 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + + L P+ I
Sbjct: 393 YQKTGVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPI----I 443
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVN 262
+V P +++K W NE +W RV+ L G S+++ +++ S + +G R
Sbjct: 444 VVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGV--WGDRNST 501
Query: 263 P-------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y ++++S+L + G+ + DEGH+++N ++
Sbjct: 502 TQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSIT 561
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + A
Sbjct: 562 IHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANA 621
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y +
Sbjct: 622 SNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPKKSEQVLFCKLTKVQRAAYEAFLA 681
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S + ++G AL I L+K+CNHPDL K IL T
Sbjct: 682 SGEMSSILRGRRE------ALYGIDMLRKICNHPDLTQHK-------------ILSTKTD 722
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYV 542
+Y SG S K+ V+ ++L + K T K +L + + LD+ ER + G+ Y
Sbjct: 723 YNYGSGA----KSGKMQVVKSLLELWK-DTGHKTLLFAQHRIMLDILERFIRGFDGFNYR 777
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 778 RMDGNTPIKVRQSMVDEFNNNPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQ 837
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++
Sbjct: 838 ARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDIQ 896
Query: 663 SLFQLEENTISDTHDKIKCSRCV 685
LF L + ++T K + V
Sbjct: 897 DLFTLGNDGPTETSQMFKDADIV 919
>gi|402072696|gb|EJT68413.1| DNA repair and recombination protein RAD26, partial [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 1071
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 283/542 (52%), Gaps = 58/542 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E E G I+ DEMGLGKT+Q I+ + L L +P+I
Sbjct: 371 YQKTGVRWLSEL-----FEQNVGGIVGDEMGLGKTVQLISFVAALHYSQKLTRPVI---- 421
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI-------DNKLNSFMQTYGR--- 258
+VAP++L++ W NE +W RV+ L G ++ D++L+S + +
Sbjct: 422 VVAPATLLRQWVNEFHRWWPPLRVSILHSSGSGMLDVRSEGRLEDDELSSSDEEAPKKKR 481
Query: 259 ----------RPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
R V +LV +Y +++ +L E + DEGH+++N +
Sbjct: 482 GAKAAKKIVDRVVKDGHVLVTTYAGLQAYGGILIPVEWDYAVLDEGHKIRNPNTALTVYC 541
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L+ RV+LSGTPIQN+L+E +SL F+ LGT EFR E PI G + A++
Sbjct: 542 KELRTANRVILSGTPIQNNLVELWSLFDFIYPMRLGTLHEFRNNIEIPIRLGGYANATNL 601
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+ A + E L ++ L++R A ++ LP K+EQV+ ++T +Q+ Y + S
Sbjct: 602 QIMTAQKCAETLKDAISPYLLQRVKADVAADLPKKSEQVLFCRLTQIQRSAYEQFLSSKE 661
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
+ + + G + G I L+K+CNHPDL +D G + + ++
Sbjct: 662 MDQILNGTRKSFFG------IDQLRKVCNHPDL-LDPSVRGDPSYR---------WGSAS 705
Query: 487 KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR-GYKYVRLD 545
KSGK+ V+ +L + K K +L S TQ LD+ E + + G +Y+R+D
Sbjct: 706 KSGKM--------QVVKALLHMWKRFGH-KTLLFSQGTQMLDILEAFVRRQDGIRYLRMD 756
Query: 546 GSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
G IK R +V+ FN T IF+L++K GG G+NL GA+R+++FDPDWNP+ D QA
Sbjct: 757 GRTPIKDRQTLVDQFNNTPELDIFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDVQARE 816
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R WR GQKK +YR ++ G+IEEK+ QRQ K+ L++ V+ +M +L +LF
Sbjct: 817 RAWRLGQKKEVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVLKDPSQRNGFATMQDLHNLF 876
Query: 666 QL 667
L
Sbjct: 877 TL 878
>gi|327302918|ref|XP_003236151.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892]
gi|326461493|gb|EGD86946.1| DNA repair protein Rhp26/Rad26 [Trichophyton rubrum CBS 118892]
Length = 1225
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 293/563 (52%), Gaps = 63/563 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + + L P+ I
Sbjct: 398 YQKTGVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPI----I 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVN 262
+V P +++K W NE +W RV+ L G S+++ +++ S + +G R
Sbjct: 449 VVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGV--WGDRNST 506
Query: 263 P-------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y ++++S+L + G+ + DEGH+++N ++
Sbjct: 507 SQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSIT 566
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + A
Sbjct: 567 IHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANA 626
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y +
Sbjct: 627 SNLQVQTAAKCAETLRDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKVQRAAYEAFLA 686
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S + ++G AL I L+K+CNHPDL K IL T
Sbjct: 687 SGEMSSILRGRRE------ALYGIDMLRKICNHPDLTQHK-------------ILSTKTD 727
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYV 542
+Y SG S K+ V+ ++L + K T K +L + + LD+ ER + G+ Y
Sbjct: 728 YNYGSGA----KSGKMQVVKSLLELWK-DTGHKTLLFAQHRIMLDILERFIGGFNGFNYR 782
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 783 RMDGNTPIKVRQSMVDEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQ 842
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++
Sbjct: 843 ARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDIQ 901
Query: 663 SLFQLEENTISDTHDKIKCSRCV 685
LF L + ++T K + V
Sbjct: 902 DLFTLGNDGPTETSQMFKDADIV 924
>gi|225555676|gb|EEH03967.1| DNA dependent ATPase [Ajellomyces capsulatus G186AR]
Length = 1276
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 291/552 (52%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L +K L I
Sbjct: 431 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHH----SKKLTKSVI 481
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G S++ D +L S +
Sbjct: 482 VVCPPTVMKQWVNEFHRWWAPFRVSILHSSGSGMVNLRSESFADARLESQLWEPDQPRRL 541
Query: 254 ---QTYGRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q +R + +LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 542 PKEQKAAKRILKRVLEEGHVLVTTYSGLQTYRSLLIPVDWGCAILDEGHKIRNPDTAITI 601
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL F LGT FR Q+E PI G + AS
Sbjct: 602 HCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMRLGTLVNFRNQFEFPIRTGGYANAS 661
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T LQ+ Y + S
Sbjct: 662 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKLQRSAYEAFLGS 721
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K+ + + Y +
Sbjct: 722 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKVLSKKPSYN---------YGS 766
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVR 543
+ KSGK+ V+ ++L + + T K +L + + LD+ ER + + G+KY R
Sbjct: 767 ASKSGKM--------QVVKSLLELWR-DTGHKTLLFAQHRIMLDILERFIISMGGFKYQR 817
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R K+V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 818 MDGNTPIKFRQKMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 877
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 878 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 936
Query: 664 LFQLEENTISDT 675
LF L + ++T
Sbjct: 937 LFTLGNDGRTET 948
>gi|302652597|ref|XP_003018145.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
gi|291181757|gb|EFE37500.1| hypothetical protein TRV_07841 [Trichophyton verrucosum HKI 0517]
Length = 1240
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 177/563 (31%), Positives = 293/563 (52%), Gaps = 63/563 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + + L P+ I
Sbjct: 413 YQKTGVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPI----I 463
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVN 262
+V P +++K W NE +W RV+ L G S+++ +++ S + +G R
Sbjct: 464 VVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGV--WGDRNST 521
Query: 263 P-------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y ++++S+L + G+ + DEGH+++N ++
Sbjct: 522 SQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSIT 581
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + A
Sbjct: 582 IHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANA 641
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y +
Sbjct: 642 SNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPKKSEQVLFCKLTKVQRAAYEAFLA 701
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S + ++G AL I L+K+CNHPDL K IL T
Sbjct: 702 SGEMSSILRGRRE------ALYGIDMLRKICNHPDLTQHK-------------ILSTKTD 742
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYV 542
+Y SG S K+ V+ ++L + K T K +L + + LD+ ER + G+ Y
Sbjct: 743 YNYGSGA----KSGKMQVVKSLLELWK-DTGHKTLLFAQHRIMLDILERFIRGFDGFNYR 797
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 798 RMDGNTPIKVRQSMVDEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQ 857
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++
Sbjct: 858 ARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDIQ 916
Query: 663 SLFQLEENTISDTHDKIKCSRCV 685
LF L + ++T K + V
Sbjct: 917 DLFTLGNDGPTETSQMFKDADIV 939
>gi|154271055|ref|XP_001536381.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
NAm1]
gi|150409604|gb|EDN05048.1| DNA repair and recombination protein RAD26 [Ajellomyces capsulatus
NAm1]
Length = 1275
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 291/552 (52%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L +K L I
Sbjct: 431 YQKTGVQWLWELY-----QQKVGGIIGDEMGLGKTIQVIAFLAGLHH----SKKLTKSVI 481
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G S++ D +L S +
Sbjct: 482 VVCPPTVMKQWVNEFHRWWAPFRVSILHSSGSGMVNLRSESFADARLESQLWEPDQPRRL 541
Query: 254 ---QTYGRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q +R + +LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 542 PKEQKAAKRILKRVLEEGHVLVTTYSGLQTYRSLLIPVDWGCAILDEGHKIRNPDTAITI 601
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL F LGT FR Q+E PI G + AS
Sbjct: 602 HCKELRTAHRLILSGTPMQNNLTELWSLFDFAFPMRLGTLVNFRNQFEFPIRTGGYANAS 661
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP K+EQV+ K+T LQ+ Y + S
Sbjct: 662 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKSEQVLFCKLTKLQRSAYEAFLGS 721
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + ++G AL I L+K+CNHPDL K+ + + Y +
Sbjct: 722 NEMSSILRGRRE------ALYGIDMLRKICNHPDLPEHKVLSKKPSYN---------YGS 766
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVR 543
+ KSGK+ V+ ++L + + T K +L + + LD+ ER + + G+KY R
Sbjct: 767 ASKSGKM--------QVVKSLLELWR-DTGHKTLLFTQHRIMLDILERFIISMGGFKYQR 817
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R K+V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 818 MDGNTPIKFRQKMVDEFNNNPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 877
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 878 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 936
Query: 664 LFQLEENTISDT 675
LF L + ++T
Sbjct: 937 LFTLGNDGRTET 948
>gi|358341364|dbj|GAA49064.1| DNA excision repair protein ERCC-6 [Clonorchis sinensis]
Length = 1267
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 287/549 (52%), Gaps = 47/549 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-------------LR 196
+QR GV ++++ + G I+ DEMGLGKT+Q I + L L
Sbjct: 152 YQRTGVNWLWQLH-----QKQSGGILGDEMGLGKTIQIIAFLAGLHYSEFLVTGKSGHLG 206
Query: 197 QGPLAKPL---IDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSF 252
GP + A+IV P+++++ W E +W RVA L G K NS
Sbjct: 207 PGPSHRHSTGDFASALIVCPATVLQQWLREFHQWYPAMRVAILHSTGSGY----QKPNSL 262
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVG--LVLCDEGHRLKNCESQTYQALMGLK 310
+++ G P +L+ +Y+T ++ VL E ++ DEGH++KN E++ A+
Sbjct: 263 IRSMGNHP-GSVLLTTYQTLVTYQDVLTAVEPSWTYLILDEGHKIKNPEAEVTHAVKRFA 321
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R++LSG+P+QN+L E +SL FV+ G LG EF +Q+ PI +G + AS +
Sbjct: 322 TSHRLILSGSPMQNNLRELWSLFDFVSPGRLGPLPEFMQQFAIPITQGGYASASPLQVET 381
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
A L ++ LIRR + LP K+EQV+ ++T+ Q++LY +S +
Sbjct: 382 AYRCACTLRDLLMPFLIRRLKTDVQIQLPAKSEQVLFCRLTNYQRQLYREFAESQLCKDL 441
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVM----DKIQTGADGFENAMNILPTGYAASY 486
+ G N +++ L+KLCNHPDLV D I G + E+ +++ + Y
Sbjct: 442 LNGKGN------VFTALILLRKLCNHPDLVTGGPRDHILLGDELPEDDVDVTTVSRISEY 495
Query: 487 KSGKL-LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLD 545
+ S+K++V+ ++L T K++L S + L L ERL G Y+R+D
Sbjct: 496 GWTRFGCPRRSSKMLVVASLLRTWS-TQGHKVLLFSQSRRMLCLLERLLITLGITYLRMD 554
Query: 546 GSMTIKKRAKVVETFNKTS-----NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
GS + +R +++ FN+++ N F+F+L+++ GG G+NL ANR+++FDPDWNP D
Sbjct: 555 GSTPVSQRPALIDRFNRSTDSSAENIFVFLLTTRVGGLGINLTAANRVLIFDPDWNPMTD 614
Query: 601 DQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE 660
QA R WR GQ + +YR L++G+IEEK+ RQ K+ L++ V+ R F ++
Sbjct: 615 LQARERAWRIGQTQDVIIYRLLTSGTIEEKIYHRQIFKQFLTNRVLKNPRQ-QRFFKTND 673
Query: 661 LRSLFQLEE 669
L+ L ++
Sbjct: 674 LQELLSFDD 682
>gi|326471229|gb|EGD95238.1| DNA repair and recombination protein RAD26 [Trichophyton tonsurans
CBS 112818]
Length = 1225
Score = 273 bits (697), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 176/563 (31%), Positives = 293/563 (52%), Gaps = 63/563 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + + L P+ I
Sbjct: 398 YQKTGVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPI----I 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVN 262
+V P +++K W NE +W RV+ L G S+++ +++ S + +G R
Sbjct: 449 VVCPPTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGV--WGDRNST 506
Query: 263 P-------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+LV +Y ++++S+L + G+ + DEGH+++N ++
Sbjct: 507 SQRGNKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSIT 566
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + A
Sbjct: 567 IHCKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANA 626
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y +
Sbjct: 627 SNLQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPKKSEQVLFCKLTKVQRAAYEAFLA 686
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S + ++G AL I L+K+CNHPDL K +L T
Sbjct: 687 SGEMSSILRGRRE------ALYGIDMLRKICNHPDLTQHK-------------VLSTKTD 727
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYV 542
+Y SG S K+ V+ ++L + K T K +L + + LD+ ER + G+ Y
Sbjct: 728 YNYGSGA----KSGKMQVVKSLLELWK-DTGHKTLLFAQHRIMLDILERFIRGFDGFNYR 782
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 783 RMDGNTPIKVRQSMVDEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQ 842
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++
Sbjct: 843 ARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDIQ 901
Query: 663 SLFQLEENTISDTHDKIKCSRCV 685
LF L + ++T K + V
Sbjct: 902 DLFTLGNDGPTETSQMFKDADIV 924
>gi|392867317|gb|EAS29452.2| DNA repair and recombination protein RAD26 [Coccidioides immitis
RS]
Length = 1213
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 284/552 (51%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L P+ I
Sbjct: 413 YQKTGVQWLWELY-----QQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLDAPI----I 463
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPVNP--- 263
+V P +++K W NE +W RV+ L G I +++ + + P P
Sbjct: 464 VVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYRPTRM 523
Query: 264 -------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 524 SGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGCAILDEGHKIRNPDTAITI 583
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS
Sbjct: 584 HCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRAGGYANAS 643
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP KTEQV+ K+T LQ+ Y + S
Sbjct: 644 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKLQRAAYEAFLSS 703
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + M+G + G + L+K+CNHPDL K + + Y
Sbjct: 704 NEMSAIMRGRRDVLFG------VDILRKICNHPDLPEHKTLSQKANY---------NYGN 748
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
S KSG K+ V+ +L + + T K +L + + LD+ E+ K L G+ Y R
Sbjct: 749 SAKSG--------KMQVVKALLELWR-DTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRR 799
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 800 MDGNTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQA 859
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 860 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 918
Query: 664 LFQLEENTISDT 675
LF L +N ++T
Sbjct: 919 LFTLGDNGPTET 930
>gi|119178020|ref|XP_001240720.1| hypothetical protein CIMG_07883 [Coccidioides immitis RS]
Length = 1198
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 284/552 (51%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L P+ I
Sbjct: 398 YQKTGVQWLWELY-----QQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLDAPI----I 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPVNP--- 263
+V P +++K W NE +W RV+ L G I +++ + + P P
Sbjct: 449 VVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYRPTRM 508
Query: 264 -------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 509 SGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGCAILDEGHKIRNPDTAITI 568
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS
Sbjct: 569 HCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRAGGYANAS 628
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP KTEQV+ K+T LQ+ Y + S
Sbjct: 629 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKLQRAAYEAFLSS 688
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + M+G + G + L+K+CNHPDL K + + Y
Sbjct: 689 NEMSAIMRGRRDVLFG------VDILRKICNHPDLPEHKTLSQKANY---------NYGN 733
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
S KSG K+ V+ +L + + T K +L + + LD+ E+ K L G+ Y R
Sbjct: 734 SAKSG--------KMQVVKALLELWR-DTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRR 784
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 785 MDGNTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQA 844
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 845 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 903
Query: 664 LFQLEENTISDT 675
LF L +N ++T
Sbjct: 904 LFTLGDNGPTET 915
>gi|320034068|gb|EFW16014.1| DNA repair and recombination protein RAD26 [Coccidioides posadasii
str. Silveira]
Length = 1198
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 284/552 (51%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L P+ I
Sbjct: 398 YQKTGVQWLWELY-----QQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLDAPI----I 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPVNP--- 263
+V P +++K W NE +W RV+ L G I +++ + + P P
Sbjct: 449 VVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYRPTRM 508
Query: 264 -------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 509 SGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGCAILDEGHKIRNPDTAITI 568
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS
Sbjct: 569 HCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRAGGYANAS 628
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP KTEQV+ K+T LQ+ Y + S
Sbjct: 629 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKLQRAAYEAFLSS 688
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + M+G + G + L+K+CNHPDL K + + Y
Sbjct: 689 NEMSAIMRGRRDVLFG------VDILRKICNHPDLPEHKTLSQKANY---------NYGN 733
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
S KSG K+ V+ +L + + T K +L + + LD+ E+ K L G+ Y R
Sbjct: 734 SAKSG--------KMQVVKALLELWR-DTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRR 784
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 785 MDGNTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQA 844
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 845 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 903
Query: 664 LFQLEENTISDT 675
LF L +N ++T
Sbjct: 904 LFTLGDNGPTET 915
>gi|443708226|gb|ELU03433.1| hypothetical protein CAPTEDRAFT_20149 [Capitella teleta]
Length = 777
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 280/548 (51%), Gaps = 44/548 (8%)
Query: 172 GCIMADEMGLGKTLQCITLMWTL----LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW 227
G I+ DEMGLGKT+Q I + L L G ++ L ++++ P++++ W E KW
Sbjct: 10 GGILGDEMGLGKTIQVIAFLAGLENSQLALGRESRGL-GPSLVICPTTVLHQWVKEFHKW 68
Query: 228 LGGR-VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
R VA L G N + S + G ILV +Y + H +L
Sbjct: 69 WPQRRVAVLHHSGSYSGSEVNLIRSIIGAKG------ILVTAYSSVLLHQDLLLPQSWHY 122
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
+ DEGH+++N +Q A LK RV+LSG+P+QN+L E +SL F+ G LGT +
Sbjct: 123 AILDEGHKIRNPNAQITVACKQLKTCHRVILSGSPVQNNLKELWSLFDFIFPGKLGTLPD 182
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL--SKYLPVKTEQ 404
F + + PI++G S A+ A + L +N L+RR A + S LP K EQ
Sbjct: 183 FMQHFSVPIVQGGYSNATQVAVQTAYKCACVLRDTINPYLLRRMKADVKESLSLPAKNEQ 242
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
V+ ++T+ Q+E+Y + S + GG + +L+K+CNHPDL
Sbjct: 243 VLFCRLTEHQREVYKEYLDSKECNSILSGG------FMVFPGLVTLRKVCNHPDL----- 291
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYT 524
+ G + ++ A+ K G + S K+ VLD +L + K + +++L S
Sbjct: 292 ---STGGPSLFHVDDEEEEAAKKFG--FWKRSGKMQVLDPLLRLWK-KQNHRVLLFSQSR 345
Query: 525 QTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
Q L++ + + RGY Y R+DG I R ++ +FN+ + FIF+L+++ GG G+NL G
Sbjct: 346 QMLEILQSYVEERGYVYRRMDGGTPISARQPLINSFNEDPSVFIFLLTTRVGGLGINLTG 405
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANR+V++DPDWNP+ D QA R WR GQ K VYR L+ G+IEEK+ RQ K+ L++
Sbjct: 406 ANRVVIYDPDWNPSTDLQARERAWRIGQLKDVTVYRLLTAGTIEEKIYHRQIFKQFLTNR 465
Query: 645 VVDCEEDVARHFSMSELRSLFQLEEN----------TISDTHDKIKCSRCVNGIQVKPPP 694
V+ + R F ++L LF L ++ + T K + R V G+ VK P
Sbjct: 466 VLK-DPKQRRFFKANDLYELFTLTDDDPKMQTETSAIFAGTGSKFEGER-VKGL-VKQSP 522
Query: 695 LESDCTDD 702
E+ D
Sbjct: 523 FEAPAASD 530
>gi|66813000|ref|XP_640679.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
gi|60468700|gb|EAL66702.1| SNF2-related domain-containing protein [Dictyostelium discoideum AX4]
Length = 1655
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 176/510 (34%), Positives = 271/510 (53%), Gaps = 50/510 (9%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
G I+ DEMGLGKT+Q ++ + +L L P A+IVAP++L+ NW E KW
Sbjct: 815 GGIVGDEMGLGKTVQIVSFLASLHYSRRLGGP----ALIVAPATLLSNWIKEFHKWWPPF 870
Query: 232 VAAL---------PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKN 282
L DG K +I K+ IL+ ++++ R + +L K
Sbjct: 871 RVGLFHSSGSGGGGNDGSDKEDIVKKIAE---------KGHILLTTFDSIRINQEILLKY 921
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
V+ DEGH+++N +++ + L+ RV+LSG+PIQN L E +SL FV G LG
Sbjct: 922 HWEYVILDEGHKIRNPDAEITLSCKQLQTPHRVILSGSPIQNKLTELWSLFDFVFPGRLG 981
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
T F+ Q+ PI G + AS + A + L +++ ++RR + + K LP K
Sbjct: 982 TLPIFKSQFSLPISVGGFANASPIQVQAAYKCAVALRDLISPYMLRRVKSDVLKSLPSKN 1041
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-M 461
EQV+ +T Q++LY + S+ ++ + G N AL I LKK+CNHPD++ M
Sbjct: 1042 EQVLMCPLTPFQEKLYLEFLDSNDIKSVLDGRRN------ALYGIDILKKICNHPDILHM 1095
Query: 462 DKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
D P Y IE SAKL V++T+L + DK++L
Sbjct: 1096 DASDEDR----------PHDYGN--------IERSAKLKVVETILPLW-FKQGDKVLLFC 1136
Query: 522 NYTQTLDLFER-LSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
Q LD+ E+ + + Y+R+DG+ +I++R +VE FN + FIF+L++K GG GL
Sbjct: 1137 QTRQMLDIVEQYIRDSTQFNYLRMDGTTSIRQRQCLVEQFNIDPSLFIFLLTTKVGGLGL 1196
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NL GANR+++FDPDWNP+ D QA RV+R GQKK +YR ++ G+IEEK+ RQ +K+
Sbjct: 1197 NLTGANRVILFDPDWNPSTDMQARERVYRIGQKKAVTIYRLITLGTIEEKIYHRQIYKQF 1256
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
L++ ++ + R F + LF +N
Sbjct: 1257 LTNKILK-DPRQKRFFKSKHFKDLFTYTKN 1285
>gi|406864834|gb|EKD17877.1| DNA repair protein rhp26 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 1202
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 286/540 (52%), Gaps = 57/540 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E G I+ DEMGLGKT+Q I+ + L L +P+I
Sbjct: 413 YQKTGVQWLGELYA-----QQVGGIVGDEMGLGKTIQIISFLAGLHYSKKLTRPII---- 463
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGR-------- 258
+VAP+++++ W NE +W RV+ L G + + +++ + YGR
Sbjct: 464 VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVGSEGRMDDSQEIYGRSNGKSKSS 523
Query: 259 --------RPV--NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
R V +LV +Y +++A VL + + DEGH+++N +
Sbjct: 524 KAAKKIVDRVVKHGHVLVTTYAGLQTYADVLIPVDWDYAVLDEGHKIRNPNTAITIYCKE 583
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L+ RV+LSGTP+QN+L+E +SL FV LGT FR+ +E PI G + A++ +
Sbjct: 584 LRTPNRVILSGTPLQNNLVELWSLFDFVFPMRLGTLVNFRQAFEVPIKLGGYANATNLQV 643
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
A + E L ++ L++R ++ LP K+EQV+ K+T Q+E Y + SD +
Sbjct: 644 LTATKCAETLKAAISPYLLQRLKVDVASDLPKKSEQVLFCKLTKPQREAYEMFLSSDEMT 703
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
M + T+ +L I L+K+CNHPDL+ +++ G G+ + KS
Sbjct: 704 SIM---DRTR---QSLYGIDILRKICNHPDLLDPRLK-GKPGYR---------WGNPNKS 747
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVRLDGS 547
GK+ V+ +L + K K +L S L++ E K L G+ Y+R+DGS
Sbjct: 748 GKM--------QVVKALLEMWK-GFGHKTLLFSQGVLMLNIIEEFVKGLNGFNYLRMDGS 798
Query: 548 MTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
+IK+R +V+ FN + +F+L++K GG G+NL GANR+++FDPDWNP+ D QA R
Sbjct: 799 TSIKERQTLVDRFNNDPDLHVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERA 858
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WR GQKK +YR ++ G+IEEK+ RQ K+ L++ ++ + + F M +L LF L
Sbjct: 859 WRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMKDLYDLFTL 917
>gi|303315667|ref|XP_003067838.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107514|gb|EER25693.1| SNF2 family N-terminal domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1213
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 175/552 (31%), Positives = 284/552 (51%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L P+ I
Sbjct: 413 YQKTGVQWLWELY-----QQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLDAPI----I 463
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTYGRRPVNP--- 263
+V P +++K W NE +W RV+ L G I +++ + + P P
Sbjct: 464 VVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMINIKKESRAEDTLTSEIWDPYRPTRM 523
Query: 264 -------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+LV +Y +++ S+L + G + DEGH+++N ++
Sbjct: 524 SGGQKAAKRILKRVLEDGHVLVTTYAGLQTYTSLLIPVDWGCAILDEGHKIRNPDTAITI 583
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS
Sbjct: 584 HCKELRTPHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRAGGYANAS 643
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP KTEQV+ K+T LQ+ Y + S
Sbjct: 644 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTKLQRAAYEAFLSS 703
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + M+G + G + L+K+CNHPDL K + + Y
Sbjct: 704 NEMSAIMRGRRDVLFG------VDILRKICNHPDLPEHKTLSQKANY---------NYGN 748
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
S KSG K+ V+ +L + + T K +L + + LD+ E+ K L G+ Y R
Sbjct: 749 SAKSG--------KMQVVKALLELWR-DTGHKTLLFAQHRIMLDILEKFIKSLTGFNYRR 799
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 800 MDGNTPIKVRQGMVDEFNNDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQA 859
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 860 RERAWRLGQKRDVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 918
Query: 664 LFQLEENTISDT 675
LF L +N ++T
Sbjct: 919 LFTLGDNGPTET 930
>gi|340518576|gb|EGR48817.1| predicted protein [Trichoderma reesei QM6a]
Length = 1153
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 281/539 (52%), Gaps = 51/539 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + + G I+ DEMGLGKT+Q I + L L KP+I
Sbjct: 399 YQKTGVQWLAELY-----KQSVGGIIGDEMGLGKTVQLIAFIAALHYSKKLKKPVI---- 449
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSF--MQTYGRRPVN 262
+VAP++L++ W +E +W RV+ L G AE + L F M T +
Sbjct: 450 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPSAEDEYDLEHFSPMATRSNKAAK 509
Query: 263 PI----------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
I L+ +Y +++A L E + DEGH+++N ++ L
Sbjct: 510 RIVRGVVQKGHVLITTYTGLQTYAEELLNVEWDYAVLDEGHKIRNPNAEITVTCKELNTP 569
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
R++LSGTPIQN+L E +SL F+ LGT F++Q+E PI +G + AS+ + A
Sbjct: 570 NRLILSGTPIQNNLTELWSLFDFIYPMRLGTLVNFKQQFEIPIRQGGYANASNLQVMTAE 629
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+T+ Q+ Y ++SD V +
Sbjct: 630 KCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTEGQRNAYQTFLRSDEVSAILN 689
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ G I L+K+CNHPDL +DK + G+E + K+
Sbjct: 690 KTRQSLYG------IDILRKICNHPDL-LDKSLSQKAGYE-------------FGDPKM- 728
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
SAKL + +L + + K +L S Q L++ E+ + G Y+R+DG I +
Sbjct: 729 ---SAKLQLTKDLLQKVMIPNGHKTLLFSQGKQMLNIIEKCIRNCGITYLRMDGETPIDQ 785
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 786 RQPMIDKFNSDPDIHVFIMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 845
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF + NT
Sbjct: 846 NKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLFTFDGNT 903
>gi|19075591|ref|NP_588091.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe 972h-]
gi|74698399|sp|Q9UR24.1|RHP26_SCHPO RecName: Full=DNA repair protein rhp26; AltName: Full=RAD26 homolog
gi|5902438|dbj|BAA84456.1| Rhp26 [Schizosaccharomyces pombe]
gi|6562902|emb|CAB62827.1| SNF2 family helicase Rhp26 [Schizosaccharomyces pombe]
Length = 973
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 284/564 (50%), Gaps = 69/564 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAY----GCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+RPH F Y+ + + Y G I+ DEMGLGKT+Q ++ + +L G K
Sbjct: 273 IRPHL-----FRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQK 327
Query: 203 PLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDG---------------GSKAEID 246
P A+IV P++L+K W NE T W RV L G S++E +
Sbjct: 328 P----ALIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAE 383
Query: 247 N-----KLNSFMQTYGRRPVN---------PILVISYETFRSHASVLHKNEVGLVLCDEG 292
KL ++ R N IL+ +Y R + ++ E G + DEG
Sbjct: 384 ESKTSIKLRGASSSFHRYAKNLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEG 443
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
H+++N +S+ + ++ R++LSGTPIQN+L E ++L FV G LGT F+ Q+
Sbjct: 444 HKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFA 503
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PI G + AS+ + A + L +++ L+RR ++ LP K+EQV+ K+T
Sbjct: 504 LPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTP 563
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
LQ++ Y + ++ +++ + G G I L+K+CNHPDLV + + +
Sbjct: 564 LQRKAYQDFLQGSDMQKILNGKRQMLYG------IDILRKICNHPDLVTREYLLHKEDY- 616
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE- 531
Y KSGKL V+ +L + K + +L S Q LD+ E
Sbjct: 617 --------NYGDPEKSGKL--------KVIRALLTLWK-KQGHRTLLFSQTRQMLDILEI 659
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L L Y R+DGS +I R +V+ FNK +F+L+++ GG G+NL GA+R+++F
Sbjct: 660 GLKDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLTGADRVILF 719
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNP+ D QA R WR GQKK VYR ++ G+IEEK+ RQ K+ L++ ++ +
Sbjct: 720 DPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPK 778
Query: 652 VARHFSMSELRSLFQLEENTISDT 675
R F M++L LF L +N T
Sbjct: 779 QRRFFKMTDLHDLFTLGDNKTEGT 802
>gi|307209151|gb|EFN86289.1| DNA excision repair protein ERCC-6 [Harpegnathos saltator]
Length = 1005
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 179/541 (33%), Positives = 284/541 (52%), Gaps = 35/541 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW-----TLLRQGPLA 201
L +Q+ V++++E + G ++ G ++ DEMGLGKT+Q I + LL
Sbjct: 260 LYRYQKIAVQWLWE-LHGRKL----GGLLGDEMGLGKTVQVIAFLAGLDCSELLSHNGRF 314
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
+ L I++ P +L++ W +W RV L GG K + ++ + S +QT G
Sbjct: 315 RGL-GPTIVICPVTLMEQWVKHFHEWWPFVRVVVLHHTGGYKGDPEDLIES-LQTGG--- 369
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
IL+ISY H ++ ++ V+ DEGH ++N + + +A+ L+ R+LL+G+
Sbjct: 370 ---ILIISYNGVLKHKDLIISSQWHYVILDEGHTIRNPQVKISRAVKRLQTPHRLLLTGS 426
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN L E +SL F+ G LGT F + +PI RG A+ + A + L
Sbjct: 427 PMQNSLKELWSLFDFILPGKLGTLPVFLEHCASPITRGGYVNATPLQEATALQVATMLKD 486
Query: 381 IVNRCLIRRTSALLSKYL--PVKTEQVVCIKMTDLQKELYTNLIKSDAV----RRTMKGG 434
+ L+RRT + +L P K EQV+ +TD QK+LY + S+ V
Sbjct: 487 TITPYLLRRTKTDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSEDVSFILHEKTNHH 546
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
E+ + L ++++L+K+CNHPDL + Q ++ + L + ++GK+ +
Sbjct: 547 ESGRYRARFLIALSALRKICNHPDLFLYTRQLDSEEDIDLSEELLEKFGYWKRAGKMTVV 606
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
S L I +++L + Q + + E L + GY Y+RLDGS + +R
Sbjct: 607 RS---------LLKIWQKQGHRVLLFTQGIQMIHILESLLQHEGYTYLRLDGSTAMSQRQ 657
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
V++ FN + F+F+L+++ GG GLNL GANR++++DPDWNPA D QA AR WR GQ K
Sbjct: 658 HVIQMFNNNPSYFVFLLTTRVGGLGLNLTGANRVIIYDPDWNPATDAQARARAWRIGQNK 717
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
+YR ++ G+IEEKM RQ K LS+ V+D E R F S+L LF L E T +
Sbjct: 718 QVTIYRLITAGTIEEKMYHRQIFKLLLSNKVLD-EPRQRRLFKTSDLVELFNLNEPTNGE 776
Query: 675 T 675
T
Sbjct: 777 T 777
>gi|153792503|ref|NP_001093563.1| DNA excision repair protein ERCC-6-like [Danio rerio]
gi|182645387|sp|A2BGR3.1|ERC6L_DANRE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
Length = 1451
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 298/589 (50%), Gaps = 80/589 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I+ + G
Sbjct: 101 LYDKLYDHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTIQVISFL-----SGMYDA 151
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L + ++V P+SL+KNW E KW G RV G SK E + L + G
Sbjct: 152 ELANHTLLVMPTSLIKNWVREFAKWTPGMRVKEF--HGSSKTERNRNLERIQRKGG---- 205
Query: 262 NPILVISYETFRSHASVLHKN-----EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ L N + V+ DE H++K ++T ++ + AK RVL
Sbjct: 206 --VIITTYQMLINNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVL 263
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTP+QN+L E ++L F QG +LGT++ F+ +YE PI R ++ A+ E+
Sbjct: 264 LTGTPVQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRIS 323
Query: 376 EQLIGIVNRCLIRRTSALLSK-----------------------------YLPVKTEQVV 406
+ L I+ +RRT A + + L K + +V
Sbjct: 324 QNLTDIIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIV 383
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--I 464
++ +Q+++Y I D ++ + + L+ +T LKKLC+HP L+ + I
Sbjct: 384 WTYLSSVQEDIYNKFISLDQIKELLT------TTRSPLAELTVLKKLCDHPRLLSQRAVI 437
Query: 465 QTG-----------ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
Q G +D E+A++ + S LIE S KL + +++ ++
Sbjct: 438 QLGLERGSDSELVHSDESESAVSQIDN------ISDHTLIEESGKLQFVVSLMECLR-EE 490
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLS 572
+ ++ S + LD+ ER+ + R ++ +RLDG++T + +R K + F IF+L+
Sbjct: 491 GHRTLIFSQSRKMLDIMERVLRNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYTIFLLT 550
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
++ GG G+ L GANR+V+FDP WNPA D QA+ R +R GQ + +YR ++ G++EEK+
Sbjct: 551 TQVGGVGITLTGANRVVIFDPSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIY 610
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+RQ K +L +++ R+FS ELR LF+LE+ S T +++
Sbjct: 611 RRQVFKDSLIRQTTGDKKNPFRYFSKQELRELFKLEDTRSSSTQQQLQA 659
>gi|410915574|ref|XP_003971262.1| PREDICTED: transcriptional regulator ATRX-like [Takifugu rubripes]
Length = 1807
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 183/598 (30%), Positives = 298/598 (49%), Gaps = 86/598 (14%)
Query: 133 IQVHVVVDPVLSNILRPHQREGVKFMYEC----VTGVRIEDAYGCIMADEMGLGKTLQCI 188
+QVH L L+PHQ +GV+FM++C V + GCI+A MGLGKTLQ +
Sbjct: 1028 VQVH----RNLVTRLKPHQVDGVQFMWDCCCESVKKTKSSHGSGCILAHCMGLGKTLQVV 1083
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDN- 247
T T+L L A++V P + V NW E KW V + ++ G + N
Sbjct: 1084 TFFHTVLLSDNLT---FRTALVVCPLNTVLNWVYEFEKWQRN-VGSDRVNVGHLVAVKNL 1139
Query: 248 --KLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG---------------LVLCD 290
+L + + Y ++V+ YE +R + N+ V+CD
Sbjct: 1140 SDRLAALQKWYRE---GGVMVMGYELYRILSLAPKTNDEASRKELKRILVDPGPDFVVCD 1196
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGH L+N S+ +AL +K +RRV+L+GTP+QN+L+EY + +F+ +LG+ +EFR +
Sbjct: 1197 EGHMLRNNGSRISKALNAIKTRRRVVLTGTPLQNNLVEYHCMANFIKNNLLGSLREFRNR 1256
Query: 351 YETPILRGQ--DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
+ PI GQ DS + D K +R L ++ C+ R+ ++L+++LP K E V+ +
Sbjct: 1257 FINPIQNGQCADSTSKDVRLMK--KRAHVLHAMLAGCVQRKDYSVLAEFLPPKQEYVLAV 1314
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
++T LQ +LY + + +M + G +L + NHP +
Sbjct: 1315 RITPLQYKLYRHYLDHITTVGSMTANIRGRTGANLFKDFHALSHIWNHPWCLQ------- 1367
Query: 469 DGFENAMNILPTGYAASYKSG----------KLLIELSAKL------MVLDTMLAVIKMT 512
+E ++ T S+K G LL E K+ MVL + +
Sbjct: 1368 LNWERKLHTYITSPVTSWKQGASDENKGWFRNLLTEADGKIMEHSGKMVLLFKILRLAAE 1427
Query: 513 TDDKIVLVSNYTQTLDLFERL-----------------------SKLRGYKYVRLDGSMT 549
++K+++ S +LDL E S + Y R+DGS+
Sbjct: 1428 LEEKVLVFSQSLFSLDLIETFLQTSHSLAMPSLANVGSFLLSASSFNKNVNYFRIDGSVG 1487
Query: 550 IKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
+ R K ++ FN N + +LS+KAG G+NL+ A+R+V+FD WNP+ D Q++ RV
Sbjct: 1488 AELRKKWMDEFNDAPNSRCNLLLLSTKAGSLGINLVAASRVVIFDASWNPSYDVQSIYRV 1547
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
+R GQ +P F+YRFL+ G++EEK+ RQ K++LS+ VVD ++ + RH+++ EL L+
Sbjct: 1548 YRFGQVRPVFIYRFLAQGTMEEKIYDRQVTKQSLSNRVVD-QQQIERHYTLHELTELY 1604
>gi|407927052|gb|EKG19957.1| SNF2-related protein [Macrophomina phaseolina MS6]
Length = 1254
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 284/544 (52%), Gaps = 62/544 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L G L KP+I
Sbjct: 440 YQKTGVQWLWELYS-----QQVGGIIGDEMGLGKTVQAISFVAGLHYSGKLTKPVI---- 490
Query: 210 IVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGS------KAEIDNKLNSFMQTYGRRPV- 261
+V P++++K W E T W RV+ L G +++I+ + S +T+ R
Sbjct: 491 VVCPATVMKQWVTEFHTWWPALRVSILHSSGSGMMDVKRESQIERDIES--RTFNNRKRL 548
Query: 262 -----------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+LV +Y S+ L E + DEGH+++N +S+
Sbjct: 549 SKSERAAKKIVDRVRTDGHVLVTTYSGLASYGEFLIPTEWEYAILDEGHKIRNPDSRVTI 608
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L+E +SL F+ LGT EFR Q+E PI G + AS
Sbjct: 609 YCKELRTANRLILSGTPMQNNLVELWSLFDFIYPMRLGTLPEFRNQFENPIRFGGYANAS 668
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP KTE+V+ ++T Q++ Y + +KS
Sbjct: 669 NLQVETAMQCAEILKETISPYLLQRFKVDVAADLPKKTERVLFCRLTVTQRQAYEDFLKS 728
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ ++G AL I L+K+CNHPDL+ K +A + Y +
Sbjct: 729 PEMNSILEGKRQ------ALFGIDILRKVCNHPDLIHHK---------SARHKSDPKYGS 773
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVR 543
KSGK+ V+ ++ + K K +L + + LD+ ER K Y+R
Sbjct: 774 GSKSGKM--------QVVKELVQMWKKKGH-KTLLFAQHRIMLDILERFVKKAADINYLR 824
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DGS IK R +V+ FN SN +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 825 MDGSTNIKDRQDLVDRFNNDSNMHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQA 884
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F + +L
Sbjct: 885 RERAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQLKDLHD 943
Query: 664 LFQL 667
LF L
Sbjct: 944 LFTL 947
>gi|260801499|ref|XP_002595633.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
gi|229280880|gb|EEN51645.1| hypothetical protein BRAFLDRAFT_200949 [Branchiostoma floridae]
Length = 1464
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 277/534 (51%), Gaps = 41/534 (7%)
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
N L +Q+ GV++++E + G IM DEMGLGKT+Q I ++ L + +
Sbjct: 513 NKLYKYQQTGVRWLWELHS-----QQAGGIMGDEMGLGKTIQAIVFLYGLQYGNVRNRGI 567
Query: 205 IDKAI------IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYG 257
+ K I +VAP +++ W E W RVA L G D + + G
Sbjct: 568 MTKYIGLGPCLVVAPVTVLHQWVREFHTWFPRVRVAILHESGTFTTSKDRLIREIARDRG 627
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
+LV SY+ L + V+ DEGH+++N +++ A + R++L
Sbjct: 628 ------VLVTSYQEVNLRQDSLLHYDWHYVILDEGHKIRNPDAKVTLACKQFRTPHRIIL 681
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SG+P+QN+L E +SL FV G LGT F +Q+ PI +G + A+ + A +
Sbjct: 682 SGSPMQNNLRELWSLCDFVFPGKLGTLPVFMEQFSVPITQGGYANATPVQVQTAYKCACV 741
Query: 378 LIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L +N L+RR ++ LP K+EQV+ ++T+ QKE Y + + S ++ + G
Sbjct: 742 LRDTINPYLLRRMKNDVKMNLNLPNKSEQVLFCRITEEQKEAYKDYLGSRECQQILDGQ- 800
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMD--KIQTGADGFENAMNILPTGYAASYKSGKLLI 493
+ + +L+K+CNHPDLV +I G D + + +K
Sbjct: 801 -----YQVFAGLITLRKICNHPDLVTGGPRIMVGTD----ESTLTKDQHYGYWKR----- 846
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
S K++V++T+L + +++L S Q LDL E + + Y Y+R+DG+ TI R
Sbjct: 847 --SGKMIVVNTLLKMWH-KQGHRVLLFSQSKQMLDLMEEFVQDQSYTYMRMDGTTTISSR 903
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
+ FNK ++ F+F+L+++ GG G+NL GANR+++FDPDWNP+ D QA R WR GQ
Sbjct: 904 QPKITKFNKDTSIFVFLLTTRVGGLGVNLTGANRVIIFDPDWNPSTDMQARERAWRIGQS 963
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K +YR L+TG+IEEK+ RQ K+ L++ V+ + R F +++ LF L
Sbjct: 964 KDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVLK-DPRQRRFFKSNDMYELFTL 1016
>gi|451847747|gb|EMD61054.1| hypothetical protein COCSADRAFT_124441 [Cochliobolus sativus
ND90Pr]
Length = 1221
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 280/543 (51%), Gaps = 59/543 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q ++ + L L KP+I
Sbjct: 402 YQKTGVQWLWELYS-----QNVGGIIGDEMGLGKTIQAVSFVAGLHYSRLLTKPVI---- 452
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQ--TYGRRPV--- 261
+V P++++K W NE +W RV+ L G + ++++ M+ YG
Sbjct: 453 VVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRREDRIEREMELRNYGDYDTTLT 512
Query: 262 ----------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+LV +Y +++A L E + DEGH+++N +
Sbjct: 513 GAGKAAKKILEKVKRDGHVLVTTYSGLQTYAEFLIPTEWECAILDEGHKIRNPNTAITIH 572
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI RG + AS+
Sbjct: 573 CKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASN 632
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E A E L V+ L++R A ++ LP K EQV+ K+T Q++ Y + + S+
Sbjct: 633 LEFETAVRCAETLKDAVSPYLLQRFKADVATDLPQKKEQVLFCKLTKQQRQAYESFLASE 692
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
+R G G + L+K+CNHPDL K + G++ Y +
Sbjct: 693 DMRSIANGKRQMLYG------VDYLRKICNHPDLTEHKTLSKKPGYD---------YGNA 737
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRL 544
KSGK+ V+ +L++ K K +L + + LD+ ++ +S+L + R+
Sbjct: 738 NKSGKM--------QVVKELLSLWK-KGGHKTLLFAQHRIMLDILQKFISQLPDINWRRM 788
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG IK R +V+ FN N +F+L++K GG G+NL GANR++++DPDWNP+ D QA
Sbjct: 789 DGETPIKDRQNMVDEFNTDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQAR 848
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ +YR +S G+IEEK+ RQ K+ L++ V+ + + F MS+L L
Sbjct: 849 ERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFQMSDLHDL 907
Query: 665 FQL 667
F L
Sbjct: 908 FTL 910
>gi|301783501|ref|XP_002927161.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1481
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 277/527 (52%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 501 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFK 555
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + +G
Sbjct: 556 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAHCHG----- 610
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 611 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 669
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 670 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 729
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++T+ Q +Y N I S V R + G
Sbjct: 730 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFIDSKEVYRILNGD------ 783
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL + G +N +I P G + G + S K++
Sbjct: 784 MQIFSGLVALRKICNHPDLF-------SGGPKNPKDI-PDGELEEDQFG--YWKRSGKMI 833
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ I R ++ +
Sbjct: 834 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRY 892
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 893 NEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 952
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 953 LLTAGTIEEKIFHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 998
>gi|400599789|gb|EJP67480.1| transcription-coupled repair protein CSB/RAD26 [Beauveria bassiana
ARSEF 2860]
Length = 1154
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 172/533 (32%), Positives = 278/533 (52%), Gaps = 51/533 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 400 YQKTGVQWLAELY-----KQRVGGIVGDEMGLGKTVQLIAFLAALHSSKKLKRPVI---- 450
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS----KAEIDNKLNSFMQTYG------R 258
+VAP++L++ W +E +W RV+ L G AE D L+ F G R
Sbjct: 451 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMLNPTAEDDYDLDHFRPVAGKSVKAAR 510
Query: 259 RPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R + + LV +Y +++A L + E + DEGH+++N ++ L
Sbjct: 511 RIIRAVVDKGHVLVTTYTGLQTYAEELLRVEWEYAVLDEGHKIRNPNAEITVTCKELNTP 570
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 571 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQGGYANASNLQVMTAE 630
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+TD Q++ Y + SD V +
Sbjct: 631 KCAEALKETISEYLLQRLKVDVAADLPEKTEQVLFCKLTDGQRKAYETFLGSDEVSAILN 690
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ G I L+K+CNHPDL+ K+ A GY Y S +L
Sbjct: 691 RRRQSLYG------IDILRKICNHPDLLDKKLSEKA------------GY--DYGSPRL- 729
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
S KL + +L + + K++L S L++ E+ + G Y+R+DG + +
Sbjct: 730 ---STKLQLTKDLLQNVMIPNGHKMLLFSQGKLMLNIIEKCMRDCGISYLRMDGETPVDQ 786
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 787 RQPMIDRFNNDPDVHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 846
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF
Sbjct: 847 NKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLF 898
>gi|317034915|ref|XP_001400735.2| DNA repair protein Rhp26/Rad26 [Aspergillus niger CBS 513.88]
Length = 1214
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 276/522 (52%), Gaps = 57/522 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L +P+I +V P++++K W NE +W
Sbjct: 437 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTRPVI----VVCPATVMKQWVNEFHRWWPPF 492
Query: 231 RVAALPIDGGSKAEIDNKLN----------SFMQTYG------------RRPVNP--ILV 266
RV+ L G I N+ + + T G +R V +LV
Sbjct: 493 RVSILHTSGSGMVNIRNESSREDALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLV 552
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+Y +++AS++ E G + DEGH+++N + L+ R++LSGTP+QN+L
Sbjct: 553 TTYSGLQTYASLVIPIEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNL 612
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E +SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L
Sbjct: 613 TELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYL 672
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
++R ++ LP K+EQV+ K+T Q++ Y + S+ ++ + G G
Sbjct: 673 LQRFKIDVAADLPKKSEQVLFCKLTKPQRQAYEAFLGSEEMKSILNGRRQVLFG------ 726
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
+ L+K+CNHPDL K+ + TGY + KSGK+ V+ ++L
Sbjct: 727 VDILRKICNHPDLQNHKLMSST-----------TGYGSGSKSGKM--------QVVKSLL 767
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
+ K T K +L + + LD+ E+ + L G+ Y R+DG+ I+ R +V+ FN +
Sbjct: 768 ELWK-DTGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAMVDEFNNDPS 826
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G
Sbjct: 827 LHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAG 886
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+IEEK+ RQ K+ L++ ++ + + F +S+L LF L
Sbjct: 887 TIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQLSDLHDLFSL 927
>gi|294657478|ref|XP_459783.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
gi|199432721|emb|CAG88022.2| DEHA2E10934p [Debaryomyces hansenii CBS767]
Length = 1157
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 286/562 (50%), Gaps = 75/562 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 360 LFDYQKTCVQWLWELYS-----QKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLEKPVL- 413
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG---GSKA-EIDNKLNSFMQTYGRRPV 261
+V P++++ W NE +W R L G G A + K+ +F++T V
Sbjct: 414 ---VVVPATVMNQWVNEFHRWWPPLRCVILHSIGSGMGKNAIHSEEKIEAFLETTDPSSV 470
Query: 262 NP------------------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+LV +Y R ++ + + G V+ DEGH+++N
Sbjct: 471 KNDSFKGINSHMRAKEIIDTVMEKGHVLVTTYVGLRIYSKFILPRQWGYVVLDEGHKIRN 530
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+S +K R++LSGTPIQN+L+E +SL F+ G LGT F +Q+ PI
Sbjct: 531 PDSDISLTCKQIKTYNRIILSGTPIQNNLIELWSLFDFIFPGRLGTLPVFEQQFSVPINM 590
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS+ + + L +++ L+RR + +++ LP K E V+ +K+T Q++L
Sbjct: 591 GGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVAQDLPKKNEMVLFVKLTQYQQDL 650
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + S+ + +KG N +G + L+K+CNHPDLV +I +
Sbjct: 651 YEKFLSSEDLHAILKGKRNILMG------VDILRKICNHPDLVDREILQRRKNY------ 698
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL---- 533
Y KSGKL VL +L + +M + +L Q LD+ E+
Sbjct: 699 ---NYGNPAKSGKL--------QVLKNLLQLWQMQGH-RTLLFCQTKQMLDILEKFVTNL 746
Query: 534 -------SKLRG-YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGA 585
++RG + Y+R+DGS I +R +V+TFN+ +F+L++K GG G+NL GA
Sbjct: 747 PSLNENGEEVRGTFNYLRMDGSTNIGRRQALVDTFNEDKQYHVFLLTTKVGGLGINLTGA 806
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
+R++++DPDWNP+ D QA R WR GQKK +YR ++ GSIEEK+ RQ K L++ +
Sbjct: 807 DRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKI 866
Query: 646 VDCEEDVARHFSMSELRSLFQL 667
+ + R F +++L LF L
Sbjct: 867 LK-DPKQRRFFKVNDLHDLFSL 887
>gi|451996821|gb|EMD89287.1| hypothetical protein COCHEDRAFT_1180734 [Cochliobolus
heterostrophus C5]
Length = 1221
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 280/543 (51%), Gaps = 59/543 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q ++ + L L KP+I
Sbjct: 402 YQKTGVQWLWELYS-----QNVGGIIGDEMGLGKTIQAVSFVAGLHYSKLLTKPVI---- 452
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQ--TYGRRPV--- 261
+V P++++K W NE +W RV+ L G + ++++ M+ YG
Sbjct: 453 VVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRREDRIEREMELRNYGDYDTTLT 512
Query: 262 ----------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+LV +Y +++A L E + DEGH+++N +
Sbjct: 513 GAGKAAKKILEKVKRDGHVLVTTYSGLQTYAEFLIPTEWECAVLDEGHKIRNPNTAITIH 572
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI RG + AS+
Sbjct: 573 CKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASN 632
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E A E L V+ L++R A ++ LP K EQV+ K+T Q++ Y + + S+
Sbjct: 633 LEFETAVRCAETLKDAVSPYLLQRFKADVATDLPQKKEQVLFCKLTKQQRQAYESFLASE 692
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
+R G G + L+K+CNHPDL K + G++ Y +
Sbjct: 693 DMRSIANGKRQMLYG------VDYLRKICNHPDLTEHKTLSKKPGYD---------YGNA 737
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRL 544
KSGK+ V+ +L++ K K +L + + LD+ ++ +S+L + R+
Sbjct: 738 SKSGKM--------QVVKELLSLWK-KGGHKTLLFAQHRIMLDILQKFISQLPDINWRRM 788
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG IK R +V+ FN N +F+L++K GG G+NL GANR++++DPDWNP+ D QA
Sbjct: 789 DGETPIKDRQNMVDEFNTDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQAR 848
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ +YR +S G+IEEK+ RQ K+ L++ V+ + + F MS+L L
Sbjct: 849 ERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFQMSDLHDL 907
Query: 665 FQL 667
F L
Sbjct: 908 FSL 910
>gi|336271287|ref|XP_003350402.1| hypothetical protein SMAC_02114 [Sordaria macrospora k-hell]
gi|380090924|emb|CCC11457.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1172
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 288/557 (51%), Gaps = 60/557 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 396 YQKTGVQWLAELYA-----QQVGGIVGDEMGLGKTVQLISFVAALHYSRKLDKPVI---- 446
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNK--LNSFMQTYGRRPVNP--- 263
+VAP+++++ W NE +W RV+ L G + N+ L+ YG+R
Sbjct: 447 VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVRNEGELDDREDDYGKRKPKKSSQ 506
Query: 264 --------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+LV +Y +++ VL + G + DEGH+++N + L
Sbjct: 507 AAKRIVERVVKHGHVLVTTYAGLQTYGDVLIPVDWGYAVLDEGHKIRNPNTAITIYCKEL 566
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI G + A++ +
Sbjct: 567 RTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQFEIPIKLGGYANATNLQIM 626
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
A + E L ++ L++R ++ LP K+EQV+ K++ Q+E Y +KSD +
Sbjct: 627 TAQKCAETLKETISPYLLQRLKVDVAADLPKKSEQVLFCKLSKPQREAYELFLKSDDMTA 686
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ + L I L+K+CNHPDL+ +++ SY+ G
Sbjct: 687 ILNRTRQS------LYGIDILRKICNHPDLLDPRLKDDP----------------SYQWG 724
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR-GYKYVRLDGSM 548
S K+ V+ ++L + K K +L TQ LD+ E + + G Y+R+DG
Sbjct: 725 S--TNKSGKMAVVKSLLPMWKRLGH-KTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKT 781
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
+K R +V+ FN + IF+L++K GG G NL GANR+++FDPDWNP+ D QA R W
Sbjct: 782 PVKDRQTLVDQFNNNPDLHIFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERAW 841
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQL 667
R GQKK +YR ++ G+IEEK+ RQ K+ LS+ V+ D ++ + F++++L LF L
Sbjct: 842 RLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTS--FNLNDLHDLFSL 899
Query: 668 E--ENTISDTHDKIKCS 682
E+ ++T + K S
Sbjct: 900 SSYEDGKTETAELFKGS 916
>gi|70951871|ref|XP_745142.1| DNA repair protein rad54 [Plasmodium chabaudi chabaudi]
gi|56525372|emb|CAH78699.1| DNA repair protein rad54, putative [Plasmodium chabaudi chabaudi]
Length = 1032
Score = 270 bits (691), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 208/324 (64%), Gaps = 8/324 (2%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ VDP+L+ LR HQREGV+F++EC+ ++ E GCI+AD+MGLGKTLQ I++++TLL+
Sbjct: 122 IEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLLK 181
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
QG KP + + +I+ P+SL+ NW +EI KWL R ++ +K +I +KL F Y
Sbjct: 182 QGYNKKPAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDNAKEKIVSKLEGF--KY 239
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ IL+ SYE FR + + K+ + +++CDE HRLKN +++TY ++ L AK+R+L
Sbjct: 240 DLKST--ILICSYECFRINNESIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLL 297
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQNDL E+F+L+ N + FRK++ PIL G+D A++ E+ A+ERL
Sbjct: 298 LSGTPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLA 357
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+L I N+ ++RRT+ LLSK LPVK + +K+ +Q+ LY + + +N
Sbjct: 358 ELSTITNKFILRRTNNLLSKVLPVKYLINIFVKLNPIQEALYV----LFLKDKKLLKSDN 413
Query: 437 TKLGMTALSSITSLKKLCNHPDLV 460
+ + L +I L+K+CNHP L+
Sbjct: 414 SNNKVNVLINIKKLEKICNHPLLL 437
Score = 232 bits (592), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 151/228 (66%), Gaps = 2/228 (0%)
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
LS+K +L +L IK T+DK+V+VSNYTQTLD E L K YK+VRLDG ++IKKR
Sbjct: 536 LSSKFQLLHFLLKTIKQDTNDKVVIVSNYTQTLDYMEILCKENHYKFVRLDGGISIKKRH 595
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
KV+ F T + FIF+LSSK+GGCG+NLI +NRL++ DPDWNPAND QA+ARVWR+GQKK
Sbjct: 596 KVISDFTNTDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKK 655
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
C++YR TG+I+EK+ QRQ K LSS +V S ++ LF ++NTI +
Sbjct: 656 ICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVTNTNLSKDQLSDENVKKLFNYKQNTICE 715
Query: 675 THDKIKCSRC--VNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPIL 720
THD I+C+RC + +V LE +D++ W H + D IL
Sbjct: 716 THDNIECNRCNFKDNTEVYSEQLEDFEEEDVNTWAHHLNIDTVPDAIL 763
>gi|350639251|gb|EHA27605.1| hypothetical protein ASPNIDRAFT_184433 [Aspergillus niger ATCC
1015]
Length = 1179
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 276/522 (52%), Gaps = 57/522 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L +P+I +V P++++K W NE +W
Sbjct: 425 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTRPVI----VVCPATVMKQWVNEFHRWWPPF 480
Query: 231 RVAALPIDGGSKAEIDNKLN----------SFMQTYG------------RRPVNP--ILV 266
RV+ L G I N+ + + T G +R V +LV
Sbjct: 481 RVSILHTSGSGMVNIRNESSREDALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLV 540
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+Y +++AS++ E G + DEGH+++N + L+ R++LSGTP+QN+L
Sbjct: 541 TTYSGLQTYASLVIPIEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNL 600
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E +SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L
Sbjct: 601 TELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYL 660
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
++R ++ LP K+EQV+ K+T Q++ Y + S+ ++ + G G
Sbjct: 661 LQRFKIDVAADLPKKSEQVLFCKLTKPQRQAYEAFLGSEEMKSILNGRRQVLFG------ 714
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
+ L+K+CNHPDL K+ + TGY + KSGK+ V+ ++L
Sbjct: 715 VDILRKICNHPDLQNHKLMSST-----------TGYGSGSKSGKM--------QVVKSLL 755
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
+ K T K +L + + LD+ E+ + L G+ Y R+DG+ I+ R +V+ FN +
Sbjct: 756 ELWK-DTGHKTLLFTQHRIMLDILEKFVNSLSGFNYRRMDGTTPIQHRQAMVDEFNNDPS 814
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G
Sbjct: 815 LHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAG 874
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+IEEK+ RQ K+ L++ ++ + + F +S+L LF L
Sbjct: 875 TIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQLSDLHDLFSL 915
>gi|134081405|emb|CAK46446.1| unnamed protein product [Aspergillus niger]
Length = 1223
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/522 (32%), Positives = 276/522 (52%), Gaps = 57/522 (10%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L +P+I +V P++++K W NE +W
Sbjct: 446 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTRPVI----VVCPATVMKQWVNEFHRWWPPF 501
Query: 231 RVAALPIDGGSKAEIDNKLN----------SFMQTYG------------RRPVNP--ILV 266
RV+ L G I N+ + + T G +R V +LV
Sbjct: 502 RVSILHTSGSGMVNIRNESSREDALLSQAWNASSTRGMPSGLKAARKVVKRVVEEGHVLV 561
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+Y +++AS++ E G + DEGH+++N + L+ R++LSGTP+QN+L
Sbjct: 562 TTYSGLQTYASLVIPIEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNNL 621
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E +SL FV LGT FR Q+E PI +G + AS+ + A + E L ++ L
Sbjct: 622 TELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPYL 681
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
++R ++ LP K+EQV+ K+T Q++ Y + S+ ++ + G G
Sbjct: 682 LQRFKIDVAADLPKKSEQVLFCKLTKPQRQAYEAFLGSEEMKSILNGRRQVLFG------ 735
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
+ L+K+CNHPDL K+ + TGY + KSGK+ V+ ++L
Sbjct: 736 VDILRKICNHPDLQNHKLMSST-----------TGYGSGSKSGKM--------QVVKSLL 776
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN 565
+ K T K +L + + LD+ E+ + L G+ Y R+DG+ I+ R +V+ FN +
Sbjct: 777 ELWK-DTGHKTLLFTQHRIMLDILEKFVNSLSGFSYRRMDGTTPIQHRQAMVDEFNNDPS 835
Query: 566 EFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTG 625
+F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++ G
Sbjct: 836 LHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTAG 895
Query: 626 SIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+IEEK+ RQ K+ L++ ++ + + F +S+L LF L
Sbjct: 896 TIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQLSDLHDLFSL 936
>gi|449475946|ref|XP_004154596.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA repair and
recombination protein RAD26-like [Cucumis sativus]
Length = 840
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 190/607 (31%), Positives = 315/607 (51%), Gaps = 76/607 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V V P ++ L HQREGVKF+Y ++ +G I+ D+MGLGKT+Q I + +
Sbjct: 99 VQVPPSINCRLLEHQREGVKFLYGLY-----KNGHGGILGDDMGLGKTIQTIAFLAAVYA 153
Query: 197 ------QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
Q D +IV+P+S++ NW NE +KW VA G ++ I +KL
Sbjct: 154 KDGDGIQKETCGKKKDPILIVSPTSVIHNWENEFSKWANFSVAVY--HGTNRDLIYDKLE 211
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ +L+ S++T+R H +L + + +++ DE HRLKN +S+ Y A G+K
Sbjct: 212 A--------GAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHRLKNEKSKLYSACAGIK 263
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
+R L+GT +QN ++E F+L V G LGT + FR+ ++ P+ GQ S A +
Sbjct: 264 TLKRFGLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEPLKHGQRSTAPERFIRI 323
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPV-KTEQVVCIKMTDLQKELY----------- 418
A+ER + L ++++ ++RRT +L + K + VV M++LQK +Y
Sbjct: 324 ADERKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQC 383
Query: 419 -----------TNLIKSDAVRRTMKGG-------ENTKLGMTA------LSSITSLKKLC 454
+ L +++ +RT++ G + G + L + L+++
Sbjct: 384 LINKDLPCGCGSPLTQAECCKRTVRNGIIWPYLHRDNPEGCDSCPFCIVLPCLVKLQQIS 443
Query: 455 NHPDLVM-------DKIQTGADGFENAM---NILPTGYAASYKSGKLLIELS--AKLMVL 502
NH +L+ +K + A+ F +A+ +I G +A +S L ++ K+ L
Sbjct: 444 NHLELIKPNPKDDPEKQRRDAE-FASAVYGSDIDLVGGSAQNESFMALSDVRHCGKMRAL 502
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
D + + + DKI+L S + LD+ E+ +GY + RLDGS R +V+ FN
Sbjct: 503 DKLFSSW-TSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGSTPTNMRQSLVDDFNS 561
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
+ ++ +F++S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R L
Sbjct: 562 SPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLL 621
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE----NTISDTHDK 678
+ GS+EE + RQ +K+ LS+ V + + R+F + FQ E N SD DK
Sbjct: 622 AAGSLEELVYSRQVYKQQLSNIAVSGKME-KRYFEGVQDCKEFQGELFGICNLFSDLSDK 680
Query: 679 IKCSRCV 685
+ S +
Sbjct: 681 LFTSEII 687
>gi|281346214|gb|EFB21798.1| hypothetical protein PANDA_016920 [Ailuropoda melanoleuca]
Length = 1488
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 280/534 (52%), Gaps = 45/534 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-----------LRQG 198
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L RQ
Sbjct: 501 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQV 555
Query: 199 PLAKPL--IDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
L + + IIV P++++ W E T W RVA L G + + +
Sbjct: 556 LLCRLFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAHC 615
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G IL+ SY R + +++ V+ DEGH+++N + A + R+
Sbjct: 616 HG------ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRI 669
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSG+P+QN+L E +SL F+ G LGT F +Q+ PI G S AS + A +
Sbjct: 670 ILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 729
Query: 376 EQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
L +N L+RR + +S LP K EQV+ ++T+ Q +Y N I S V R + G
Sbjct: 730 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHRVYQNFIDSKEVYRILNG 789
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
M S + +L+K+CNHPDL + G +N +I P G + G
Sbjct: 790 D------MQIFSGLVALRKICNHPDLF-------SGGPKNPKDI-PDGELEEDQFG--YW 833
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S K++V++++L I +++L S Q LD+ E + + Y Y+++DG+ I R
Sbjct: 834 KRSGKMIVVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASR 892
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK
Sbjct: 893 QPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQK 952
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 953 KQVTVYRLLTAGTIEEKIFHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1005
>gi|452988763|gb|EME88518.1| hypothetical protein MYCFIDRAFT_46188 [Pseudocercospora fijiensis
CIRAD86]
Length = 1208
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 180/588 (30%), Positives = 299/588 (50%), Gaps = 72/588 (12%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L G + KP+I
Sbjct: 407 YQKTGVQWLWELYS-----QQVGGIIGDEMGLGKTIQIISFLAGLHYSGKIQKPII---- 457
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFM------------- 253
+V P++++K W NE +W RV+ L G ++ +N+ +
Sbjct: 458 VVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDVGRENRYEEALEAEDYSSKKTLSK 517
Query: 254 -QTYGRRPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
Q +R ++ + LV +Y +++A +L + + DEGH+++N +
Sbjct: 518 GQKAAKRILDTVTKQGHVLVTTYSGLQTYAELLIPTDWEYAVLDEGHKIRNPNTAITIYC 577
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L RV+LSGTP+QN+L E +SL FV LGT F+ Q+E PI G + AS+
Sbjct: 578 KELCTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKNQFEIPIKHGGYANASNL 637
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+ A + E L ++ L++R ++ LP K+E+V+ K+T LQ+E Y + S+
Sbjct: 638 QVETAMKCAETLKDAISPYLLQRFKVDVAADLPKKSERVLFCKLTKLQREAYQWFLDSED 697
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
++ M G AL + L+K+CNHPDLV + + + Y
Sbjct: 698 MKSIMNGKRQ------ALYGVDILRKICNHPDLVEHRTLSKKSEYN---------YGDGR 742
Query: 487 KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLD 545
KSGK+ V+ ++L K K +L + + LD+ ER + + G+ Y R+D
Sbjct: 743 KSGKM--------QVVKSLLQEWKRDGH-KTLLFAQHRIMLDILERFIGNMAGFSYRRMD 793
Query: 546 GSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
G+ IK+R +V+ FN + +F+L++K GG G+NL GANR++++DPDWNP+ D QA
Sbjct: 794 GTTPIKERQNLVDEFNNDPDLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDVQARE 853
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F + +L LF
Sbjct: 854 RAWRLGQKREVLIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQLKDLHDLF 912
Query: 666 QLEENTISDTHD-KIKCSRCVNGIQVK--------PPPLESDCTDDLS 704
T+ D+ D + + G +VK P + DDLS
Sbjct: 913 -----TLGDSADGQTETGNIFKGTEVKFKQGNLSTPEDGTAPAGDDLS 955
>gi|126272865|ref|XP_001366076.1| PREDICTED: DNA excision repair protein ERCC-6 [Monodelphis domestica]
Length = 1492
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 181/534 (33%), Positives = 279/534 (52%), Gaps = 45/534 (8%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 501 LFKYQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNY 555
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G NK +Q R
Sbjct: 556 RFEGLGPTVIVCPTTVMHQWVREFHTWWPPFRVAILHETGS----YTNKKVKLIQEIAR- 610
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
+ IL+ SY R ++ ++ V+ DEGH+++N + A + R++LSG
Sbjct: 611 -CHGILITSYSYIRLMQDNINNHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 669
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L
Sbjct: 670 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 729
Query: 380 GIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR + +S LP K EQV+ ++TD Q+++Y N I S V R + G
Sbjct: 730 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQRKVYQNFIDSKEVYRILNGE--- 786
Query: 438 KLGMTALSSITSLKKLCNHPDLVMD--KIQTGA--DGFENAMNILPTGYAASYKSGKLLI 493
M S + +L+K+CNHPDL KI G D E A GY
Sbjct: 787 ---MQVFSGLVALRKICNHPDLFSGGPKIIKGIPDDELEEADQF---GY----------W 830
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S K++V++++L I +++L S Q L L E + R Y Y+++DG+ TI R
Sbjct: 831 KRSGKMIVVESLLK-IWHKQGHRVLLFSQSRQMLHLLEVFLRARDYSYLKMDGTTTIASR 889
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK
Sbjct: 890 QPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQK 949
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K VYR L+ G+IEEK+ RQ K+ L++ ++ + R F ++L LF L
Sbjct: 950 KQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRILK-DPKQRRFFKSNDLYELFTL 1002
>gi|68483751|ref|XP_714234.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
gi|46435782|gb|EAK95157.1| hypothetical protein CaO19.607 [Candida albicans SC5314]
gi|238880196|gb|EEQ43834.1| hypothetical protein CAWG_02085 [Candida albicans WO-1]
Length = 1055
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 294/553 (53%), Gaps = 68/553 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E T G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 271 LFDYQKTCVQWLWELYT-----QKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLDKPVL- 324
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGR--VAALPIDGGSKAEI-DNKLNSFMQT-------- 255
+V P++++ W NE +W + I G + ++KL ++++
Sbjct: 325 ---VVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMNGSVSESKLEEYLESTDPDATQS 381
Query: 256 --YG-RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+G + +N +LV +Y R ++ + E G V+ DEGH+++N +S
Sbjct: 382 SLHGIKSQINAQEIVDRVMEKGHVLVTTYVGLRIYSKHILPREWGYVVLDEGHKIRNPDS 441
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
+K R++LSGTPIQN+L+E +SL FV G LGT F++++ PI G
Sbjct: 442 DISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINIGGY 501
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ +++ + A + L +++ ++RR + +++ LP K E V+ +K+T +Q+ELY +
Sbjct: 502 ANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYES 561
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
++S+ + +KG N +G + L+K+CNHPDLV D N
Sbjct: 562 FLQSEDLESILKGKRNVLMG------VDILRKICNHPDLVY------RDTLMKRKN---- 605
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER----LSKL 536
Y KSGK+ VL +L + + + + K +L Q LD+ E+ LS +
Sbjct: 606 -YGDPAKSGKM--------QVLKNLLRLWQ-SENHKTLLFCQTRQMLDILEKFVANLSLI 655
Query: 537 RG--YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
G + Y+R+DGS I KR +V+ FN+ + +F+L++K GG G+NL GA+R++++DPD
Sbjct: 656 NGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPD 715
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNP+ D QA R WR GQK+ +YR ++TGSIEEK+ RQ K L++ ++ + R
Sbjct: 716 WNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILK-DPKQRR 774
Query: 655 HFSMSELRSLFQL 667
F ++L LF L
Sbjct: 775 FFKANDLHDLFTL 787
>gi|68483838|ref|XP_714194.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
gi|46435735|gb|EAK95111.1| hypothetical protein CaO19.8240 [Candida albicans SC5314]
Length = 1055
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 175/553 (31%), Positives = 294/553 (53%), Gaps = 68/553 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E T G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 271 LFDYQKTCVQWLWELYT-----QKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLDKPVL- 324
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGR--VAALPIDGGSKAEI-DNKLNSFMQT-------- 255
+V P++++ W NE +W + I G + ++KL ++++
Sbjct: 325 ---VVVPATVLNQWVNEFHRWWPPLRCIILHSIGSGMNGSVSESKLEEYLESTDPDATQS 381
Query: 256 --YG-RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+G + +N +LV +Y R ++ + E G V+ DEGH+++N +S
Sbjct: 382 SLHGIKSQINAQEIVDRVMEKGHVLVTTYVGLRIYSKHILPREWGYVVLDEGHKIRNPDS 441
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
+K R++LSGTPIQN+L+E +SL FV G LGT F++++ PI G
Sbjct: 442 DISLTCKKIKTVNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQEFSIPINIGGY 501
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+ +++ + A + L +++ ++RR + +++ LP K E V+ +K+T +Q+ELY +
Sbjct: 502 ANSNNLQVKTAYKCAVVLRDLISPYMLRRLKSDVAQDLPKKNEMVLFVKLTKIQQELYES 561
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
++S+ + +KG N +G + L+K+CNHPDLV D N
Sbjct: 562 FLQSEDLESILKGKRNVLMG------VDILRKICNHPDLVY------RDTLMKRKN---- 605
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER----LSKL 536
Y KSGK+ VL +L + + + + K +L Q LD+ E+ LS +
Sbjct: 606 -YGDPAKSGKM--------QVLKNLLRLWQ-SENHKTLLFCQTRQMLDILEKFVANLSLI 655
Query: 537 RG--YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPD 594
G + Y+R+DGS I KR +V+ FN+ + +F+L++K GG G+NL GA+R++++DPD
Sbjct: 656 NGGDFNYLRMDGSTPISKRQMLVDAFNQDPDMHVFLLTTKVGGLGVNLTGADRVIIYDPD 715
Query: 595 WNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR 654
WNP+ D QA R WR GQK+ +YR ++TGSIEEK+ RQ K L++ ++ + R
Sbjct: 716 WNPSTDIQARERAWRLGQKRDITIYRLMTTGSIEEKIYHRQIFKTFLTNKILK-DPKQRR 774
Query: 655 HFSMSELRSLFQL 667
F ++L LF L
Sbjct: 775 FFKANDLHDLFTL 787
>gi|363732948|ref|XP_420137.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Gallus gallus]
Length = 1280
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 180/571 (31%), Positives = 295/571 (51%), Gaps = 64/571 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQREGV F+Y + E G I+AD+MGLGKT+Q I + G LI +
Sbjct: 95 HQREGVAFLYR----LHREGRPGGILADDMGLGKTIQIIAFL-----SGMFDSELIRHVL 145
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P++LV +W E +W G RV G SK E L + G I++ S
Sbjct: 146 LIMPTTLVSSWLAEFARWTPGLRVKEF--HGTSKTERTRNLEKIQRKNG------IVITS 197
Query: 269 YE----TFRSHASVLHKNEV-GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
Y+ ++ AS ++ V ++ DE H++K ++T + + + AK R+LL+GTP+Q
Sbjct: 198 YQMLINNWKQLASCHGQDFVWDYIILDEAHKIKCPSNKTTKCVYAIPAKHRLLLTGTPLQ 257
Query: 324 NDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
N+L E +SL F QG +LGTA+ FR +YE PI R ++ A+ E+ + E L+ I+
Sbjct: 258 NNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKALGLKISENLMTII 317
Query: 383 NRCLIRRT-----------------------SALLSKYLPVKTEQVVCIKMTDLQKELYT 419
+RRT SA + L K + VV + + +Q+++Y
Sbjct: 318 KPYFLRRTKDDIKKNHAEKSDTPLPEDPREPSAPVMPSLTRKNDFVVWVYLAPVQEKIYR 377
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--IQTGADG------- 470
N + D V+ + + L+ +T LKKLC+HP L+ + Q DG
Sbjct: 378 NFLCLDHVKEVLTTTR------SPLAELTVLKKLCDHPRLLSARACTQLDLDGQEYLEQD 431
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
E+ +L + S + LI+ S K++ L +L ++ + ++ S + LD+
Sbjct: 432 HESEAAVLSGANKIDHLSDETLIQESGKMLFLVGLLGRLR-EEGHRTLVFSQSRKMLDII 490
Query: 531 ERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
ER+ R +K +R+DG++T + +R K + F + +F+L+++ GG G+ L ANR+V
Sbjct: 491 ERVLSSRQFKIMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTTQVGGVGITLTAANRVV 550
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+FDP WNPA D QA+ R +R GQK+ +YR ++ G++EEK+ +RQ K +L +
Sbjct: 551 IFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDK 610
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIK 680
++ R+FS ELR LF LE+ S T +++
Sbjct: 611 KNPFRYFSKQELRELFTLEDTRTSTTQIQLQ 641
>gi|345564545|gb|EGX47506.1| hypothetical protein AOL_s00083g315 [Arthrobotrys oligospora ATCC
24927]
Length = 1145
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 186/567 (32%), Positives = 287/567 (50%), Gaps = 73/567 (12%)
Query: 136 HVVVDPV-----LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
H+V D ++ L +Q+ V +++ + + G I+ DEMGLGKT+Q I
Sbjct: 370 HIVDDGFKLPGDIAQSLFDYQKTAVNWLW----NLHAKQHTGGILGDEMGLGKTIQTIAF 425
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL-----------GGRVAALPIDG 239
+ L L KP++ IVAP++++K WCNE KW G + ++ D
Sbjct: 426 IAGLHYSQLLTKPVL----IVAPATVLKQWCNEFHKWWPCLRVSILHSSGSGMLSIAADK 481
Query: 240 GSKAEIDNKLN----------SFMQTYGRRPVNP------ILVISYETFRSHASVLHKNE 283
++ ID+ S Q ++ V+ IL+ +Y ++ +L +
Sbjct: 482 KAEETIDDDEGLLEVLESAAPSKAQKAAKKIVDKVKAKGHILISTYTGLSTYHKLLLDTD 541
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
V+ DEGH+++N E++ A L++ R +LSGTPIQN+L E +SL FV G LG
Sbjct: 542 WECVVLDEGHKIRNPEAKITIAAKQLRSTTRFILSGTPIQNNLRELWSLFDFVYPGKLGI 601
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
Q F + PI G + A+ + A + L ++N ++RR A ++ LP K +
Sbjct: 602 YQVFNENIAIPIKLGGYAGANSTQIHTAFKCAVVLRELINPYMLRRLKADVA-VLPPKQD 660
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MD 462
QV+ + QKE Y N IKS + G + L+ I L+K+CNHPDL +
Sbjct: 661 QVLFCNLVVEQKEAYENYIKSPEAFDILSGKRDV------LAGIDVLRKICNHPDLCNRE 714
Query: 463 KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLV 520
K+ D Y +SGK+ I + ++K D K ++
Sbjct: 715 KLSIDHD----------YDYGNPVRSGKMQI-----------VKGLLKAWEKDNLKCLIF 753
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
S TQ LD+ E+ K + Y+Y+RLDG+ IK R +V+ +N +F+L++K GG GL
Sbjct: 754 SQGTQMLDILEKFVK-KKYRYLRLDGTTDIKLRQSMVDQYNNDPTLQVFLLTTKVGGYGL 812
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NL GA R+++FDPDWNP+ND QA R WR GQK +YR LS G+IEEK+ QRQ +K+
Sbjct: 813 NLTGATRIIIFDPDWNPSNDMQARERSWRLGQKHEVRIYRLLSRGTIEEKIYQRQLYKQF 872
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ +++ E R F M ++R LF L
Sbjct: 873 LTKKILEDPEQ-RRAFRMDDMRDLFTL 898
>gi|296813433|ref|XP_002847054.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
113480]
gi|238842310|gb|EEQ31972.1| DNA repair and recombination protein RAD26 [Arthroderma otae CBS
113480]
Length = 1233
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 296/563 (52%), Gaps = 63/563 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + L L P+I
Sbjct: 398 YQKTGVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLKGPII---- 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDG------GSKAEIDNKL--------NSFMQ 254
+V P +++K W NE W RV+ L G S+++ +++ NS Q
Sbjct: 449 VVCPPTVMKQWVNEFHDWWPPFRVSILHTSGIGMVNLKSESQAEDRYTSGAWGDRNSTSQ 508
Query: 255 TYG---RRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
G RR + +LV +Y ++++S+L + G+ + DEGH+++N ++
Sbjct: 509 RGGKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWGIAVLDEGHKIRNPDTSITIH 568
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS+
Sbjct: 569 CKELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANASN 628
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
+ A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S
Sbjct: 629 LQVQTAAKCAETLKDAISPYLLQRFKMDVAADLPKKSEQVLFCKLTKVQRAAYEAFLASG 688
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
+ ++G AL I L+K+CNHPDL K + L T Y +
Sbjct: 689 EMSSILRGRRE------ALYGIDMLRKICNHPDLTQHKTLS-----------LKTDY--N 729
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY---KYV 542
Y SG S K+ V+ ++L + + T K +L + + LD+ ER +RG+ Y
Sbjct: 730 YGSGAK----SGKMQVVKSLLELWR-DTGHKTLLFAQHRIMLDILERF--IRGFDRFNYR 782
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 783 RMDGNTPIKVRQTMVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQ 842
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++
Sbjct: 843 ARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDMQ 901
Query: 663 SLFQLEENTISDTHDKIKCSRCV 685
LF L + ++T K + V
Sbjct: 902 DLFTLGNDGPTETSQMFKDADVV 924
>gi|156064177|ref|XP_001598010.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980]
gi|154690958|gb|EDN90696.1| hypothetical protein SS1G_00096 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1103
Score = 269 bits (688), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 175/543 (32%), Positives = 279/543 (51%), Gaps = 60/543 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 419 YQKTGVQWLSELYN-----QQVGGIIGDEMGLGKTIQIISFLAGLHYSKKLTKPII---- 469
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDN--KLNS------FMQTYGRRP 260
+VAP+++++ W NE +W RV+ L G + N +L + QT + P
Sbjct: 470 VVAPATVLRQWVNEFHRWWPALRVSILHSSGTGMLNVRNEGRLEDEEDDIIYGQTTKKAP 529
Query: 261 VNP---------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+ +LV +Y ++++ L + + DEGH+++N +
Sbjct: 530 KSQKLAQKIVDRVVKHGHVLVTTYAGLQTYSDTLINVDWDYAVLDEGHKIRNPNTAVTIY 589
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ RV+LSGTP+QN L+E +SL FV LGT FR+ +E PI G + A++
Sbjct: 590 CKELRTPNRVILSGTPMQNGLIELWSLFDFVFPMRLGTLVNFRQSFEVPIKIGGYANATN 649
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
+ A + E L ++ L++R ++ LP K+EQV+ K+T Q++ Y + SD
Sbjct: 650 LQVLTATKCAETLKDAISPYLLQRLKVDVAADLPKKSEQVLFCKLTRPQRDAYEMFLASD 709
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
++ + + L I L+K+CNHPDL+ +++T +
Sbjct: 710 EMKSILNRTRQS------LYGIDILRKICNHPDLLDKRLKT----------------KPN 747
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRL 544
YK G S K+ V+ +L + K K +L S Q LD+ E KL G+ Y+R+
Sbjct: 748 YKWGNG--NKSGKMQVVKALLQMWK-GYGHKTLLFSQGVQMLDILEEFVKKLGGFNYLRM 804
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG IK R +V+ FN N +F+L++K GG G+NL GANR+++FDPDWNP+ D QA
Sbjct: 805 DGGTAIKDRQTLVDQFNNDPNMHVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQAR 864
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQKK +YR ++ G+IEEK+ RQ K+ L++ ++ + + F+M +L L
Sbjct: 865 ERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFAMKDLYDL 923
Query: 665 FQL 667
F L
Sbjct: 924 FTL 926
>gi|402465772|gb|EJW01437.1| hypothetical protein EDEG_00031 [Edhazardia aedis USNM 41457]
Length = 793
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 287/543 (52%), Gaps = 57/543 (10%)
Query: 136 HVVVDPVLSNI----LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM 191
H++ D V+ + L +Q+E +K+ YE + G ++ADEMGLGKTLQ I +
Sbjct: 238 HIIEDIVVPSFIWEKLFDYQKESIKWFYELY-----KKEVGAVLADEMGLGKTLQVIAFL 292
Query: 192 WTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNS 251
L + LI + PS+L+ W E K+ L I K+ DN
Sbjct: 293 SALYISNKIKFTLI-----IVPSTLLNQWVTEFKKFF----PFLRIILIHKSHTDNISKL 343
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
F + +++ISY+ ++++ S L ++ DEGH++KN +S + L
Sbjct: 344 FKEI---TKCFCVVLISYDGYKTYGSHLRNINFDYIVLDEGHKIKNKDSNISLQISRLVC 400
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
K +++LSGTPIQN+L E +++ +FVN G+LGT +EF +YE PI G A++ KA
Sbjct: 401 KNKIVLSGTPIQNNLKELWAIFNFVNYGLLGTHEEFVTEYEDPIKNGGYRGATEEVVHKA 460
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+ L ++ ++RR + ++ LP KT+ V+ K+TD+Q+ LY ++S+ + + +
Sbjct: 461 YTKSRMLRNLIKPFIMRRLKSEVAGELPNKTDLVIFCKLTDIQESLYQKELESEFIYKIL 520
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
G + + + + SL+K+CNHP L ++YK
Sbjct: 521 IGKQ------SCMPGLMSLRKICNHPYLFTRN--------------------STYKDD-- 552
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL---RGYKYVRLDGSM 548
+++ S K+ +D +L K ++ K L+ +TQ + + E L + Y+++DG
Sbjct: 553 IVKNSGKMKKVDELLQ--KWRSEGKKALI--FTQMIGMIELLEIYMAENDFSYLKMDGKT 608
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
++K R + ++ FN N F F+L+++ GG GLNL+GA+R++++DPDWNP+ D QA R +
Sbjct: 609 SLKTREEYIDKFNSDDNIFAFLLTTRVGGLGLNLVGASRIIIYDPDWNPSTDSQAKERAY 668
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
R GQ+K +YR ++ G+IEEK+ RQ K LS ++ + +++ F +L LF E
Sbjct: 669 RYGQEKDVKIYRLIAAGTIEEKIYNRQIFKNMLSQKIL-SDPKLSKFFEKDDLNELFTYE 727
Query: 669 ENT 671
+ T
Sbjct: 728 KPT 730
>gi|449444556|ref|XP_004140040.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Cucumis sativus]
Length = 880
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 313/606 (51%), Gaps = 74/606 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
V V P ++ L HQREGVKF+Y ++ +G I+ D+MGLGKT+Q I + +
Sbjct: 139 VQVPPSINCRLLEHQREGVKFLYGLY-----KNGHGGILGDDMGLGKTIQTIAFLAAVYA 193
Query: 197 ------QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
Q D +IV+P+S++ NW NE +KW VA G ++ I +KL
Sbjct: 194 KDGDGIQKETCGKKKDPILIVSPTSVIHNWENEFSKWANFSVAVY--HGTNRDLIYDKLE 251
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLK 310
+ +L+ S++T+R H +L + + +++ DE HRLKN +S+ Y A G+K
Sbjct: 252 A--------GAIEVLITSFDTYRIHGGILSEVKWEILIIDEAHRLKNEKSKLYSACAGIK 303
Query: 311 AKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTK 370
+R L+GT +QN ++E F+L V G LGT + FR+ ++ P+ GQ S A +
Sbjct: 304 TLKRFGLTGTIMQNKIMELFNLFDLVAPGSLGTREHFREFFDEPLKHGQRSTAPERFIRI 363
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSKYLPV-KTEQVVCIKMTDLQKELY----------- 418
A+ER + L ++++ ++RRT +L + K + VV M++LQK +Y
Sbjct: 364 ADERKQHLAAVLHKYMLRRTKQETIGHLMLGKEDNVVFCAMSELQKRVYRRMLQLPDIQC 423
Query: 419 -----------TNLIKSDAVRRTMKGG-------ENTKLGMTA------LSSITSLKKLC 454
+ L +++ +RT++ G + G + L + L+++
Sbjct: 424 LINKDLPCGCGSPLTQAECCKRTVQNGIIWPYLHRDNPEGCDSCPFCIVLPCLVKLQQIS 483
Query: 455 NHPDLVMDKIQTGADG------FENAM---NILPTGYAASYKSGKLLIELS--AKLMVLD 503
NH +L+ + ++ F +A+ +I G +A +S L ++ K+ LD
Sbjct: 484 NHLELIKPNPKDDSEKQRRDAEFASAVYGSDIDLVGGSAQNESFMALSDVRHCGKMRALD 543
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
+ + + DKI+L S + LD+ E+ +GY + RLDGS R +V+ FN +
Sbjct: 544 KLFSSW-TSQGDKILLFSYSVRMLDILEKFIVRKGYSFSRLDGSTPTNMRQSLVDDFNSS 602
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
++ +F++S++AGG GLNL+ ANR+V+FDP+WNPA D QA R +R GQK+ V+R L+
Sbjct: 603 PSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLA 662
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE----NTISDTHDKI 679
GS+EE + RQ +K+ LS+ V + + R+F + FQ E N SD DK+
Sbjct: 663 AGSLEELVYSRQVYKQQLSNIAVSGKME-KRYFEGVQDCKEFQGELFGICNLFSDLSDKL 721
Query: 680 KCSRCV 685
S +
Sbjct: 722 FTSEII 727
>gi|389630280|ref|XP_003712793.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae
70-15]
gi|351645125|gb|EHA52986.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae
70-15]
gi|440469732|gb|ELQ38833.1| DNA repair and recombination protein RAD26 [Magnaporthe oryzae Y34]
Length = 1197
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 180/555 (32%), Positives = 284/555 (51%), Gaps = 63/555 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 393 YQKTGVRWLAELY-----EQNVGGIVGDEMGLGKTVQLISFVAALHYSKKLKKPVI---- 443
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDN--KLNSFMQTYG--------- 257
+VAP++L++ W NE +W RV+ L G +I N ++ Y
Sbjct: 444 VVAPATLLQQWVNEFHRWWPPLRVSILHSSGSGMYDIRNEGRIEDDDDGYSSDESTQKSK 503
Query: 258 --------RRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+R V+ +LV +Y +++ +L E + DEGH+++N +
Sbjct: 504 KSKGAAAAKRIVDRVVESGHVLVTTYAGLQTYGDILIPVEWDYAVLDEGHKIRNPNTSLT 563
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ RV+LSGTPIQN+L+E +SL F+ LGT EFR E PI G + A
Sbjct: 564 VYCKELRTPNRVILSGTPIQNNLVELWSLFDFIYPMRLGTLHEFRNNIEIPIKMGGYANA 623
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
++ + A + E L ++ L++R A ++ LP K+EQV+ ++T+ Q++ Y +
Sbjct: 624 TNLQIMAAQKCAETLKDAISPYLLQRVKADVATDLPKKSEQVLFCRLTESQRQAYEQFLA 683
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S A+ + + G + G I L+K+CNHPDLV ++ N +
Sbjct: 684 SQAMDQILSGTRKSLFG------IDYLRKVCNHPDLVEPSLR----------NDHHYNWG 727
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYV 542
++ KSGK+ V+ +L + K K +L S TQ LD+ E K Y+
Sbjct: 728 SANKSGKM--------QVVKALLQMWK-KFGHKTLLFSQGTQMLDILEDFVRKQDDITYL 778
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG IK R +V+ FN + +F+L++K GG G NL GA+R++++DPDWNP+ D Q
Sbjct: 779 RMDGKTAIKDRQAMVDQFNNSPGIDLFLLTTKVGGLGTNLTGADRVIIYDPDWNPSTDVQ 838
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQKK +YR ++ G+IEEK+ QRQ K+ L++ V+ +M++L
Sbjct: 839 ARERAWRLGQKKEVTIYRLMTAGTIEEKIYQRQIFKQFLTNKVLKDPSQRTAFATMNDLH 898
Query: 663 SLFQL--EENTISDT 675
LF L EN ++T
Sbjct: 899 DLFTLSSHENGKTET 913
>gi|432112497|gb|ELK35235.1| DNA excision repair protein ERCC-6 [Myotis davidii]
Length = 1489
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 276/534 (51%), Gaps = 45/534 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-----------LRQG 198
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L RQ
Sbjct: 500 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQV 554
Query: 199 PLAKPL--IDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
L + + IIV P++++ W E T W RVA L G + +
Sbjct: 555 LLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHRKEKLIRDIAHC 614
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G IL+ SY R + +++ V+ DEGH+++N + A + R+
Sbjct: 615 HG------ILITSYSYIRLRQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRI 668
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSG+P+QN+L E +SL FV G LGT F +Q+ PI G S AS + A +
Sbjct: 669 ILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 728
Query: 376 EQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
L +N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 729 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNG 788
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
M S + +L+K+CNHPDL +T +N G+
Sbjct: 789 E------MQVFSGLIALRKICNHPDLFSGGPKTTRGISDNEPEEDQFGH----------W 832
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
S K++V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R
Sbjct: 833 RRSGKMIVVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASR 891
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQ+
Sbjct: 892 QPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQR 951
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 952 KQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1004
>gi|401828407|ref|XP_003887917.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392998925|gb|AFM98936.1| superfamily II DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 687
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 293/560 (52%), Gaps = 55/560 (9%)
Query: 132 KIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM 191
KI+ V L + L +Q++GV++M + ++ G ++AD+MGLGKT+Q I +
Sbjct: 128 KIRQGFSVPGFLWDTLFEYQKDGVEWMLKLY-----KEEKGGVLADDMGLGKTVQMIVFL 182
Query: 192 WTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNS 251
L + G I + +I+ P+++V W I +W +
Sbjct: 183 SVLFQSG-----YISRVLILCPATIVSQW---ILEW-------------------KRFYP 215
Query: 252 FMQTY---GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
F++ Y R + ++SYE F++ L + +++ DEGH++KN +Q ++
Sbjct: 216 FVRVYFGFSERSGEGVYLMSYERFKAREKGLVWD---ILILDEGHKIKNRNAQITLSVKK 272
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
++A+ + +LSGTPIQN+L E +S+ FVN G+LG+ F +++E I RG AS+ +
Sbjct: 273 VRARSKFVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFHEEFEEVIRRGGYRSASNLQV 332
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
+A + L ++ ++RRT + +S LP K +++V +T +Q ELY +++S V
Sbjct: 333 ERAYKHSLMLRSLIEPYILRRTKSQISHKLPSKEDKIVFCTLTPVQVELYNRVLESKHVM 392
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVM-DKIQTGADGFENAMNILPTGYAASYK 487
+ + G N LS I+ L+K+CNHP L K+ D N G A
Sbjct: 393 KVLTGKANL------LSGISMLRKVCNHPRLFFPGKVDGPEDCSSETCNEKNDGKAEISL 446
Query: 488 SGKL---LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
G+ L+ S K+ +L +L K K+++ S + LD+ E +R Y Y+R+
Sbjct: 447 EGEERYGLVSSSCKIKILMDLLKKWK-EEGSKVLVFSQTIRMLDIIEMC--IRKYTYLRM 503
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG R+ +V+ FN+ + FIF+L++K GG GLNLIGA+R+V++DPDWNP+ D QA
Sbjct: 504 DGRTATSVRSSLVDRFNRDEDVFIFLLTTKVGGLGLNLIGASRIVIYDPDWNPSTDTQAK 563
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQ+K +YRF+ +IEEK+ Q+Q K L V+ + R F+ S + L
Sbjct: 564 ERAWRYGQRKDVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL-SNPRLNRFFNKSCINEL 622
Query: 665 FQLEENTISD---THDKIKC 681
F + +D H+ KC
Sbjct: 623 FSFTMTSGADEVRMHESHKC 642
>gi|300797826|ref|NP_001178272.1| DNA excision repair protein ERCC-6 [Bos taurus]
Length = 1481
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 275/527 (52%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 500 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 554
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + + +G
Sbjct: 555 GLGPTIIVCPTTVMHQWVKEFHTWWPAFRVAVLHETGSFTHKKEKLVRDIARCHG----- 609
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 610 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 668
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 669 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 728
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 729 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE------ 782
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + +P + G + S K++
Sbjct: 783 MQIFSGLVALRKICNHPDLF--------SGGPKNLKGIPDEELGEDQFG--YWKRSGKMI 832
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ I R ++ +
Sbjct: 833 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRY 891
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 892 NEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 951
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 952 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 997
>gi|402880149|ref|XP_003903675.1| PREDICTED: DNA excision repair protein ERCC-6 [Papio anubis]
Length = 1494
Score = 269 bits (687), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 511 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 565
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 566 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 620
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 621 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 679
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 680 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 739
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 740 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 793
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 794 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 843
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 844 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 902
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 903 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 962
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 963 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1008
>gi|109088973|ref|XP_001107536.1| PREDICTED: DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1496
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 513 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 567
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 568 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 622
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 623 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 681
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 682 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 741
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 742 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 795
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 796 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 845
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 846 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 904
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 905 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 964
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 965 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1010
>gi|441657345|ref|XP_004091168.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Nomascus leucogenys]
Length = 1492
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 275/527 (52%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 509 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 563
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 564 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 618
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 619 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 677
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 678 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 737
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 738 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE------ 791
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + + G + S K++
Sbjct: 792 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDEELEADQFG--YWKRSGKMI 841
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ T+ R ++ +
Sbjct: 842 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTVASRQPLITRY 900
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 901 NEDTSIFVFLLTTRVGGLGINLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 960
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 961 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1006
>gi|355562411|gb|EHH19005.1| hypothetical protein EGK_19625 [Macaca mulatta]
Length = 1493
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>gi|410975581|ref|XP_003994209.1| PREDICTED: DNA excision repair protein ERCC-6 [Felis catus]
Length = 1485
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 280/543 (51%), Gaps = 38/543 (6%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------L 195
+ N L +Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L
Sbjct: 494 LFKNFLSMYQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRT 548
Query: 196 RQGPLAKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQ 254
R + IIV P++++ W E T W RVA L G + + +
Sbjct: 549 RGSNYRFKGLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDIAH 608
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
+G IL+ SY R + +++ V+ DEGH+++N + A + R
Sbjct: 609 CHG------ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHR 662
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++LSG+P+QN+L E +SL F+ G LGT F +Q+ PI G S AS + A +
Sbjct: 663 IILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKC 722
Query: 375 LEQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
L +N L+RR + +S LP K EQV+ ++T+ Q ++Y N I S V R +
Sbjct: 723 ACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQLKVYQNFIDSKEVYRILN 782
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G M S + +L+K+CNHPDL G + +P + G
Sbjct: 783 GD------MQIFSGLVALRKICNHPDLF--------SGGPKNLRGIPDEELEEDQFG--Y 826
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+ S K++V++++L I +++L S Q LD+ E + + Y Y+++DG+ I
Sbjct: 827 WKRSGKMIVVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIAS 885
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R ++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQ
Sbjct: 886 RQPLITRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQ 945
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTI 672
KK VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L +
Sbjct: 946 KKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTLTSPDV 1004
Query: 673 SDT 675
S +
Sbjct: 1005 SQS 1007
>gi|383416487|gb|AFH31457.1| DNA excision repair protein ERCC-6 [Macaca mulatta]
Length = 1495
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 512 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 566
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 567 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 621
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 622 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 680
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 681 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 740
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 741 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 794
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 795 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 844
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 845 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 903
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 904 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 963
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 964 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1009
>gi|355782760|gb|EHH64681.1| hypothetical protein EGM_17967 [Macaca fascicularis]
Length = 1495
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 512 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 566
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 567 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 621
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 622 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 680
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 681 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 740
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 741 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 794
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 795 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 844
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 845 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 903
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 904 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 963
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 964 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1009
>gi|380796601|gb|AFE70176.1| DNA excision repair protein ERCC-6, partial [Macaca mulatta]
Length = 1101
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 173/530 (32%), Positives = 275/530 (51%), Gaps = 38/530 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 115 LFKYQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNY 169
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 170 RFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG-- 227
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ SY R + + + V+ DEGH+++N + A + R++LSG
Sbjct: 228 ----ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 283
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L
Sbjct: 284 SPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 343
Query: 380 GIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 344 DTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE--- 400
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
M S + +L+K+CNHPDL G + LP + G + S
Sbjct: 401 ---MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSG 447
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
K++V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++
Sbjct: 448 KMIVVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLI 506
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK
Sbjct: 507 TRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVT 566
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 567 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 615
>gi|126522468|gb|AAI32448.1| Ercc6 protein [Mus musculus]
Length = 1157
Score = 268 bits (686), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 276/527 (52%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 182 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 236
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + + +G
Sbjct: 237 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRDIVYCHG----- 291
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+L+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 292 -VLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 350
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 351 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 410
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S AV R + G EN
Sbjct: 411 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNG-ENQ--- 466
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
S + +L+K+CNHPDL + + E+ + G+ S K++
Sbjct: 467 --IFSGLVALRKICNHPDLFSGGPKNASGPPEDELEEEQFGH----------WRRSGKMI 514
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L + +++L S Q L + E + Y Y+++DG+ TI R ++ +
Sbjct: 515 VVESLLKIWHRQ-GQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKY 573
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 574 NEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 633
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 634 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 679
>gi|119613505|gb|EAW93099.1| hCG32740, isoform CRA_e [Homo sapiens]
Length = 1356
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>gi|350592895|ref|XP_003483566.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1481
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 178/547 (32%), Positives = 282/547 (51%), Gaps = 41/547 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 499 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 553
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + +G
Sbjct: 554 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSFTHKKEKLVRDIAHCHG----- 608
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 609 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPM 667
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 668 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 727
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 728 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE------ 781
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G F+ +P + G + S K++
Sbjct: 782 MQIFSGLVALRKICNHPDL----FSGGPKNFKG----IPGEELEEDQFG--YWKRSGKMI 831
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 832 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRY 890
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 891 NEDASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 950
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L T DT +
Sbjct: 951 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL---TSPDTSQSTE 1006
Query: 681 CSRCVNG 687
S G
Sbjct: 1007 TSAIFAG 1013
>gi|50289791|ref|XP_447327.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526637|emb|CAG60264.1| unnamed protein product [Candida glabrata]
Length = 1071
Score = 268 bits (686), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 290/564 (51%), Gaps = 80/564 (14%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L +Q+ GV+++YE R G I+ DEMGLGKT+Q + L L+ P++
Sbjct: 296 LLFNYQKTGVQWLYELFQQRR-----GGIIGDEMGLGKTIQVTAFLAALHHSNLLSGPVL 350
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGS------------------KAEIDN 247
IV P++++K WCNEI +W A + G+ K+E++N
Sbjct: 351 ----IVCPATVMKQWCNEIHQWWPPFRAVILHSIGAGMNDKSNLTEDEIENMIIKSELEN 406
Query: 248 ----------KLNSFMQTYGRRPVN---------PILVISYETFRSHASVLHKNEVGLVL 288
KL S ++T G N I++ +Y R H+ L +
Sbjct: 407 TDFHDYENASKLKSKVET-GMHMQNLISKVVADGHIIITTYVGLRIHSDKLLNVNWSYCV 465
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
DEGH+++N +S+ LK K R++LSGTPIQN+L+E +SL F+ G LGT F+
Sbjct: 466 LDEGHKIRNPDSEISLTCKKLKCKNRIILSGTPIQNNLVELWSLFDFIYPGRLGTLPVFQ 525
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
+Q+ PI G + A++ + L +++ L+RR A ++K LP K E V+
Sbjct: 526 QQFVQPINMGGYANATNTQVQTGYRCAVALRDLISPYLLRRVKADVAKDLPKKKEMVLFC 585
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
K+T+ Q+ Y + SD + + +KGG+ L I L+K+CNHPDL+
Sbjct: 586 KLTEFQRRKYLEFLSSDELSQ-IKGGKR-----HVLYGIDILRKICNHPDLL------DR 633
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
D +N +GY +SG K+ V+ +L + K + K +L + Q LD
Sbjct: 634 DYIKNT-----SGYGDPKRSG--------KMQVVKQLLKLWK-SEGHKTLLFTQSRQMLD 679
Query: 529 LFERLSK-----LRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLI 583
+ E K L +Y+R+DG+ +I+ R +V+ FN S + +F+L+++ GG G+NL
Sbjct: 680 ILEEFIKFKEPELSDIRYLRMDGTTSIQVRQTLVDRFNNESYD-VFLLTTRVGGLGVNLT 738
Query: 584 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS 643
GANR++++DPDWNP+ D QA R WR GQK+ +YR + +G+IEEK+ RQ K+ L +
Sbjct: 739 GANRIIIYDPDWNPSTDLQARERAWRIGQKREVSIYRLMISGTIEEKIYHRQIFKQFLMN 798
Query: 644 CVVDCEEDVARHFSMSELRSLFQL 667
V+ + R F EL+ LF L
Sbjct: 799 KVL-SDPKQKRFFKTKELQDLFSL 821
>gi|327290056|ref|XP_003229740.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 296/574 (51%), Gaps = 60/574 (10%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + + G
Sbjct: 63 LHDKLFEHQKEGVAFLYNLYHKKR----QGGILADDMGLGKTIQIIAFLSGMFDAG---- 114
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
L+ +++ P +LV NW E W+ G + G SK E + L + G
Sbjct: 115 -LVRSVLLIMPVTLVNNWMREFANWVPG-IRVKVFHGTSKKEREQNLEQIQRRTG----- 167
Query: 263 PILVISYETFRSHASVLHKNE-----VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
+L+ SY+ ++ L + V+ DE H++K+ ++T +++ G+ A R+LL
Sbjct: 168 -VLLTSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVYGIPAVNRILL 226
Query: 318 SGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
+GTP+QN+L E ++L F QG +LGTA+ F+ +YE+PI++ ++ A+ E+ + +
Sbjct: 227 TGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLGEKALGLKISQ 286
Query: 377 QLIGIVNRCLIRRTS----------------------ALLSKYLPVKTEQVVCIKMTDLQ 414
L+ I+ +RR+ AL LP K + +V + + +Q
Sbjct: 287 NLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDFIVWVYLAPMQ 346
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENA 474
+++Y N + D ++ + + L+ +T LKKLC+HP L+ + + G E +
Sbjct: 347 EDIYRNFLSLDHIKELLMTTR------SPLAELTVLKKLCDHPRLLSAQA-CASLGLEVS 399
Query: 475 MNILPTGYAA-------SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
PT + S KLLIE S KL+ L +L ++ +V S + L
Sbjct: 400 EYSEPTDQSTLSMTQDIKRVSDKLLIEESGKLVFLVALLEKLQEEGHQTLVF-SQSRKML 458
Query: 528 DLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGAN 586
D+ E + R ++ +R+DG++T + +R K V F + +F+L+++ GG GL L A
Sbjct: 459 DIIEHILTKRSFRLMRVDGTVTCLAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLTSAT 518
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
R+V+FDP WNPA D QA+ R +R GQK+ +YR ++ G++EEK+ +RQ K +L
Sbjct: 519 RVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQQST 578
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
+++ R+F+ ELR LF LE+ T S T +++
Sbjct: 579 GDKKNPYRYFTQQELRELFTLEDTTSSATQLQLQ 612
>gi|327290729|ref|XP_003230074.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 697
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 177/575 (30%), Positives = 297/575 (51%), Gaps = 62/575 (10%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + + G
Sbjct: 63 LHDKLFEHQKEGVAFLYNLYHKKR----QGGILADDMGLGKTIQIIAFLSGMFDAG---- 114
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
L+ +++ P +LV NW E W+ G + G SK E + L + G
Sbjct: 115 -LVRSVLLIMPVTLVNNWMREFANWVPG-IRVKVFHGTSKKEREQNLEQIQRRTG----- 167
Query: 263 PILVISYETFRSHASVLHKNE-----VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
+L+ SY+ ++ L + V+ DE H++K+ ++T +++ G+ A R+LL
Sbjct: 168 -VLLTSYQMVLANWEQLSNLDGQPFVWNYVILDEAHKIKSPSAKTTKSVYGIPAVNRILL 226
Query: 318 SGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
+GTP+QN+L E ++L F QG +LGTA+ F+ +YE+PI++ ++ A+ E+ + +
Sbjct: 227 TGTPVQNNLRELWALFDFACQGSLLGTAKTFKMEYESPIMKAREKDATLGEKALGLKISQ 286
Query: 377 QLIGIVNRCLIRRTS----------------------ALLSKYLPVKTEQVVCIKMTDLQ 414
L+ I+ +RR+ AL LP K + +V + + +Q
Sbjct: 287 NLMAIIKPYFLRRSKGEILKLNSERSVCLTGEERDYIALEMPSLPRKNDFIVWVYLAPMQ 346
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGAD-GFEN 473
+++Y N + D ++ + + L+ +T LKKLC+HP L+ Q A+ G E
Sbjct: 347 EDIYRNFLSLDHIKELLMTTR------SPLAELTVLKKLCDHPRLL--SAQACANLGLEV 398
Query: 474 AMNILPTGYAA-------SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
+ PT + S KLLIE S KL+ L +L ++ +V S +
Sbjct: 399 SEYSEPTDQSTLSMTQDIKRVSDKLLIEESGKLVFLVALLEKLQEEGHQTLVF-SQSRKM 457
Query: 527 LDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGA 585
LD+ E + R ++ +R+DG++T + +R K V F + +F+L+++ GG GL L A
Sbjct: 458 LDIIEHILTKRSFRLMRVDGTVTCLAEREKRVRQFQMDKSYSVFLLTTQVGGVGLTLTSA 517
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
R+V+FDP WNPA D QA+ R +R GQK+ +YR ++ G++EEK+ +RQ K +L
Sbjct: 518 TRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIQQS 577
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
+++ R+F+ ELR LF LE+ T S T +++
Sbjct: 578 TGDKKNPYRYFTQQELRELFTLEDTTSSATQLQLQ 612
>gi|348560752|ref|XP_003466177.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia porcellus]
Length = 1477
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 273/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 514 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 568
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKL-NSFMQTYGRRPVN 262
+ +IV P++++ W E W A+ + GS A KL +G
Sbjct: 569 GLGPTMIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYAHRKEKLIRDIAHCHG----- 623
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 624 -ILITSYSYVRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPM 682
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL FV G LGT F +Q+ PI G + AS + A L +
Sbjct: 683 QNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYRCACVLRDTI 742
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V + + G
Sbjct: 743 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYQILNGE------ 796
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 797 MQIFSGLVALRKICNHPDLF--------SGGPKNLGGLPDEELEEGQFG--YWKRSGKMI 846
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L + +++L S Q L + E + RGY Y+++DGS TI R ++ +
Sbjct: 847 VVESLLKIWHRQ-GQRVLLFSQSRQMLHILEVFLRARGYSYLKMDGSTTIASRQPLITRY 905
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK+ VYR
Sbjct: 906 NQDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYR 965
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 966 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1011
>gi|296220127|ref|XP_002756186.1| PREDICTED: DNA excision repair protein ERCC-6 [Callithrix jacchus]
Length = 1490
Score = 268 bits (685), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 273/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 508 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 562
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 563 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 617
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 618 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 676
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 677 QNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 736
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 737 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE------ 790
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 791 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 840
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 841 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 899
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ + F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 900 NEDKSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 959
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 960 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1005
>gi|361131939|gb|EHL03554.1| putative DNA repair and recombination protein RAD26 [Glarea
lozoyensis 74030]
Length = 1207
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 282/544 (51%), Gaps = 63/544 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + + G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 430 YQKTGVQWLGELYS-----QSVGGIVGDEMGLGKTIQIISFLAGLHYSKKLTKPII---- 480
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQTY-GRRPVNP-- 263
+VAP+++++ W NE +W RV+ L G + + K + Y G P
Sbjct: 481 VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVGREEKYEEIDEMYTGHTTKKPSK 540
Query: 264 -----------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+LV +Y +++A VL E + DEGH+++N +
Sbjct: 541 SSRSAQKIVDRVVEHGHVLVTTYAGLQTYADVLIPVEWDYAVLDEGHKIRNPNTGITIHC 600
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L+ RV+LSGTP+QN+L+E +SL FV LGT FR+ +E PI G + A++
Sbjct: 601 KELRTPNRVILSGTPMQNNLVELWSLFDFVFPMRLGTLVNFRQAFEVPIRLGGYANATNL 660
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+ A + E L ++ L++R ++ LP K+EQV+ K+T Q+E Y + SD
Sbjct: 661 QVLTATKCAETLKATISPYLLQRLKVDVAADLPKKSEQVLFCKLTKPQREAYEMFLSSDE 720
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
+ + + L I L+K+CNHPDL+ +++ G G++ +
Sbjct: 721 MTSILNHSRKS------LYGIDILRKICNHPDLLDPRLR-GKPGYK---------WGNPN 764
Query: 487 KSGKLLIELSAKLMVLDTMLAVIKMTTD--DKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
KSGK+ + + A+++M + K +L S Q L++ E K L G+ Y+R
Sbjct: 765 KSGKMQV-----------VKALVQMWKNMGHKTLLFSQGVQMLNIIEEFIKSLDGFNYLR 813
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG +K R +V+ FN + IF+L++K GG G+NL GANR+++FDPDWNP+ D QA
Sbjct: 814 MDGGTNVKDRQTLVDRFNNDPDMHIFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQA 873
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQKK ++R ++ G+IEEK+ RQ K+ L++ ++ + + F M +L
Sbjct: 874 RERAWRLGQKKEVTIFRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMKDLYD 932
Query: 664 LFQL 667
LF L
Sbjct: 933 LFSL 936
>gi|452839797|gb|EME41736.1| hypothetical protein DOTSEDRAFT_73948 [Dothistroma septosporum
NZE10]
Length = 1271
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 285/542 (52%), Gaps = 58/542 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E G I+ DEMGLGKT+Q I+ + L G + KP+ +
Sbjct: 459 YQKTGVQWLWELYA-----QQVGGIIGDEMGLGKTIQIISFLAGLHYSGKIDKPV----V 509
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--------DNKLNSFMQ------ 254
+V P++++K W NE +W RV+ L G ++ D + + F +
Sbjct: 510 VVCPATVMKQWVNEFHRWWPPLRVSILHTSGSGMLDVRREESFEDDLEEDGFSRKSTHSK 569
Query: 255 --TYGRRPVNP------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL 306
+R V+ +LV +Y +++A +L + + DEGH+++N +
Sbjct: 570 GYKQAKRIVDKVLRDGHVLVTTYSGLQTYAELLIPTDWQYAVLDEGHKIRNPNTAITIYC 629
Query: 307 MGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDA 366
L+ RV+LSGTP+QN+L E +SL FV LGT F+ Q+E PI +G + AS+
Sbjct: 630 KELRTHNRVILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFKNQFEIPIRQGGYANASNL 689
Query: 367 ERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDA 426
+ A + E L ++ L++R ++ LP K+E+V+ K+T LQ++ Y + S+
Sbjct: 690 QVETAMKCAETLKDAISPYLLQRFKVDVAADLPKKSERVLFCKLTKLQRDAYEWFLNSED 749
Query: 427 VRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASY 486
++ M G AL I L+K+CNHPDLV K + ++ Y
Sbjct: 750 MKSIMAGKRQ------ALYGIDILRKICNHPDLVEHKTLSKKTNYK---------YGIGS 794
Query: 487 KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVRLD 545
K G K+ V+ +L + K K +L + + LD+ E+ + + G+ Y R+D
Sbjct: 795 KCG--------KMQVVKALLEIWKRNG-HKTLLFAQHRIMLDILEKFVQGMEGFNYRRMD 845
Query: 546 GSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
G+ +IK R +V+ FNK + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 846 GNTSIKDRQDLVDEFNKDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARE 905
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R WR GQK+ +YR ++ G+IEEK+ RQ K+ LS+ ++ + + F + +L LF
Sbjct: 906 RAWRLGQKREVEIYRLMTAGTIEEKIYHRQIFKQFLSNKIL-RDPKQRQTFQLRDLHDLF 964
Query: 666 QL 667
L
Sbjct: 965 TL 966
>gi|440902038|gb|ELR52884.1| DNA excision repair protein ERCC-6 [Bos grunniens mutus]
Length = 1488
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 278/534 (52%), Gaps = 45/534 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-----------LRQG 198
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L RQ
Sbjct: 500 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQV 554
Query: 199 PLAKPL--IDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
L + + IIV P++++ W E T W RVA L G + + + +
Sbjct: 555 LLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPAFRVAVLHETGSFTHKKEKLVRDIARC 614
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G IL+ SY R + +++ V+ DEGH+++N + A + R+
Sbjct: 615 HG------ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRI 668
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSG+P+QN+L E +SL F+ G LGT F +Q+ PI G S AS + A +
Sbjct: 669 ILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 728
Query: 376 EQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
L +N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 729 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNG 788
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
M S + +L+K+CNHPDL G + +P + G
Sbjct: 789 E------MQIFSGLVALRKICNHPDLF--------SGGPKNLKGIPDEELGEDQFG--YW 832
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S K++V++++L I +++L S Q LD+ E + + Y Y+++DG+ I R
Sbjct: 833 KRSGKMIVVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASR 891
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK
Sbjct: 892 QPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQK 951
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 952 KQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1004
>gi|124487019|ref|NP_001074690.1| DNA excision repair protein ERCC-6 [Mus musculus]
gi|189442813|gb|AAI67234.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [synthetic construct]
Length = 1481
Score = 268 bits (685), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 276/527 (52%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 506 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 560
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + + +G
Sbjct: 561 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSYTHKKERLIRDIVYCHG----- 615
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+L+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 616 -VLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 674
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 675 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 734
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S AV R + G EN
Sbjct: 735 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKAVYRILNG-ENQ--- 790
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
S + +L+K+CNHPDL + + E+ + G+ S K++
Sbjct: 791 --IFSGLVALRKICNHPDLFSGGPKNASGPPEDELEEEQFGH----------WRRSGKMI 838
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L + +++L S Q L + E + Y Y+++DG+ TI R ++ +
Sbjct: 839 VVESLLKIWHRQ-GQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKY 897
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 898 NEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 957
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 958 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1003
>gi|403276713|ref|XP_003930033.1| PREDICTED: DNA excision repair protein ERCC-6 [Saimiri boliviensis
boliviensis]
Length = 1492
Score = 268 bits (684), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 509 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 563
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 564 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 618
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 619 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 677
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 678 QNNLRELWSLFDFIFPGKLGTLPVFLEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 737
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 738 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE------ 791
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 792 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 841
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 842 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 900
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 901 NEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 960
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 961 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1006
>gi|297686445|ref|XP_002820759.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein ERCC-6
[Pongo abelii]
Length = 1493
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASSVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>gi|47222591|emb|CAG02956.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1174
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 183/579 (31%), Positives = 293/579 (50%), Gaps = 113/579 (19%)
Query: 133 IQVHVVVDPVLSNILRPHQREGVKFMYEC----VTGVRIEDAYGCIMADEMGLGKTLQCI 188
+QVH D V S L+PHQ +GV+FM++C V GCI+A MGLGKTLQ +
Sbjct: 591 VQVHR--DLVTS--LKPHQVDGVQFMWDCCCESVKEANSSHGSGCILAHCMGLGKTLQVV 646
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW---LGG-RVAALPIDGGSKAE 244
T T+L L A+++ P + V NW E KW +G RV P D
Sbjct: 647 TFFHTVLLSENLK---FRTALVICPLNTVLNWVYEFKKWQRNMGSERVDVCPAD-----H 698
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV---------------GLVLC 289
I +L + + Y ++++ YE +R + N+ V+C
Sbjct: 699 IRGRLRALQKWYRE---GGVMIMGYEMYRLLSQTAKTNDEVWRNELKGILVNPGPDFVVC 755
Query: 290 DEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRK 349
DEGH L+N S +AL +K +RRV+L+GTP+QN+L+EY +V+F+ +LG+ +EFR
Sbjct: 756 DEGHILRNDASGISKALNAIKTRRRVVLTGTPLQNNLVEYHCMVNFIKNDLLGSLREFRN 815
Query: 350 QYETPILRGQ--DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
++ PI GQ DS + D K +R L ++ C+ R+ ++L+++LP K E V+
Sbjct: 816 RFINPIQNGQCADSTSRDVRVMK--KRAHVLHAMLAGCVQRKDYSVLAEFLPPKQEFVIA 873
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
+++T LQ +LY +D I
Sbjct: 874 VRITPLQCKLYR---------------------------------------YYLDHITGT 894
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT--DDKIVLVSNYTQ 525
+DG + L TG A ++E S K+++L +++M ++K+++ S +
Sbjct: 895 SDGNKRWFRNLLTGDAK-------IMEHSGKMVLL---FKILRMAEELEEKVLVFSQFLL 944
Query: 526 TLDLFERLSKL-----------------RGYKYVRLDGSMTIKKRAKVVETFNKTSNEF- 567
+LDL ER + + Y R+DGS+ + R K + FN +N
Sbjct: 945 SLDLIERYLQTSHAATGLSSSVKVSRWEKNVDYFRIDGSVGPQLRKKWADEFNNAANNRC 1004
Query: 568 -IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGS 626
+ ++S+KAG G+NL+ A+R+V+FD WNP+ D Q++ RV+R GQ +P FVYRFL+ G+
Sbjct: 1005 KLLLISTKAGSLGINLVAASRVVIFDASWNPSYDVQSVYRVYRFGQVRPVFVYRFLAQGT 1064
Query: 627 IEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
+EEK+ RQ K++LS+ VVD ++ + RHF++ EL L+
Sbjct: 1065 MEEKIYDRQVTKQSLSNRVVD-QQQIERHFTLHELTELY 1102
>gi|426364707|ref|XP_004049439.1| PREDICTED: piggyBac transposable element-derived protein 3-like
isoform 1 [Gorilla gorilla gorilla]
Length = 1493
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>gi|354548455|emb|CCE45191.1| hypothetical protein CPAR2_702030 [Candida parapsilosis]
Length = 1011
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 290/557 (52%), Gaps = 72/557 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 314 LFDYQKTCVQWLWELYS-----QKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLRKPVL- 367
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG---GSKAEI-DNKLNSFMQTYG---- 257
IV P++++ W NE +W R L G G A++ + K+ +M+ +
Sbjct: 368 ---IVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMGENAKVSEAKMEEYMENWDPQTS 424
Query: 258 -------RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
+ +N +L+ +Y R ++ + E G + DEGH+++N
Sbjct: 425 KSSLKGIKTQINAQKIVDRVVAKGHVLITTYVGLRIYSKYILPQEWGYCVLDEGHKIRNP 484
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+S +K R++LSGTPIQN+L E +SL F+ G LGT F++Q+ PI G
Sbjct: 485 DSDISLTCKQIKTVNRIILSGTPIQNNLTELWSLFDFIFPGRLGTLPVFQQQFSIPINVG 544
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ +++ + A + L +++ L+RR ++K LP K+E V+ +K+T +Q++LY
Sbjct: 545 GYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKNDVAKDLPKKSEMVLFVKLTRIQQDLY 604
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
++S+ + +KG N +G+ L +K+CNHPDLV + +A+ +
Sbjct: 605 EKFLESEDLNSILKGKRNVLMGVDVL------RKICNHPDLV----------YRDAL-MH 647
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL----- 533
+ Y KSGK+ VL +L + + + K +L Q LD+ E+
Sbjct: 648 KSNYGDPKKSGKM--------QVLKNLLQLWQ-SEGHKTLLFCQTRQMLDILEKFVSNLP 698
Query: 534 ---SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVM 590
+ + + Y+R+DGS I +R +V+ FN N +F+L++K GG G+NL GA+R+++
Sbjct: 699 CLNDQAQYFTYLRMDGSTAISQRQSLVDEFNNDPNVHVFLLTTKVGGLGVNLTGADRVII 758
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
+DPDWNP+ D QA R WR GQKK +YR ++TGSIEEK+ RQ K L + ++ +
Sbjct: 759 YDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILK-DP 817
Query: 651 DVARHFSMSELRSLFQL 667
R F ++L LF L
Sbjct: 818 KQRRFFKTNDLHDLFTL 834
>gi|190347304|gb|EDK39551.2| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC
6260]
Length = 1117
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 290/558 (51%), Gaps = 71/558 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +QR V++++E + G I+ DEMGLGKT+Q ++ + L G L KP+I
Sbjct: 320 LFQYQRTCVQWLWELYS-----QKTGGIIGDEMGLGKTIQVVSFIAGLHYSGLLDKPVI- 373
Query: 207 KAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGG--------SKAEIDNKL-------- 249
+V P++++ W NE T W R A L G S+ +I+N +
Sbjct: 374 ---VVVPATVMMQWVNEFHTWWPPLRCAILHSIGSGMSKSALTSEEKIENMMANDDFDLN 430
Query: 250 -NSFM-QTYG--------RRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+ F+ Q G R V+ +L+ +Y R ++ + ++ G + DEGH+++N
Sbjct: 431 EDKFLAQQKGLSNAKNIVDRVVSKGHVLITTYVGLRVYSKYILPHQWGYAVLDEGHKIRN 490
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
S LK R++LSGTPIQN+L+E +SL FV G LGT F +Q+ PI
Sbjct: 491 PNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFEQQFSIPINM 550
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS+ + + L +++ L+RR + +++ LP K E V+ +K+T Q+++
Sbjct: 551 GGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSDVAQDLPKKEEMVLFVKLTQYQQDM 610
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + S+ + +KG N L+ + +L+K+CNHPDLV ++ G+
Sbjct: 611 YEKFLSSEDLHAILKGKRN------MLTGVDTLRKICNHPDLVDRELLLRKKGY------ 658
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL---- 533
Y KSGK+L VL +L + + + + +L Q LD+ E+L
Sbjct: 659 ---NYGIPNKSGKML--------VLKGLLQLWQ-SQGHRTLLFCQTKQMLDILEKLLVNL 706
Query: 534 ----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
+ Y+R+DGS I KR +V+ FN +N +F+L++K GG G+NL GA+R++
Sbjct: 707 TRISDGTEYFNYMRMDGSTPISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLTGADRVI 766
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
++DPDWNP+ D QA R WR GQK+ +YR ++ G+IEEK+ RQ K L++ ++ +
Sbjct: 767 IYDPDWNPSTDIQARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILK-D 825
Query: 650 EDVARHFSMSELRSLFQL 667
R F +++L LF L
Sbjct: 826 PKQRRFFKVNDLHDLFTL 843
>gi|50548883|ref|XP_501912.1| YALI0C16643p [Yarrowia lipolytica]
gi|49647779|emb|CAG82232.1| YALI0C16643p [Yarrowia lipolytica CLIB122]
Length = 1085
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 185/591 (31%), Positives = 296/591 (50%), Gaps = 75/591 (12%)
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
N L +Q+ V++++E T G I+ DEMGLGKT+Q I+ + L G L KP+
Sbjct: 293 NALFDYQKTCVQWLWELHT-----QKTGGIIGDEMGLGKTIQIISFLAGLHHSGLLTKPV 347
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGG-RVAAL---------------------------- 235
I +V P++++K W E KW RV L
Sbjct: 348 I----VVCPATVMKQWVEEFHKWWPALRVVILHSMGEGSKGKKKRKGEIDSDDDDDEMIR 403
Query: 236 PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
P +K ++ F + ++V +Y +S+ S+L E G + DEGH++
Sbjct: 404 PTPSSTKNLVETIDKVFKDGH-------VVVTTYAGLKSYRSLLLDREWGYCILDEGHKI 456
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
+N +SQ LK R++LSGTPIQN+L E +SL+ FV G LGT F Q+ PI
Sbjct: 457 RNPDSQITLDCKQLKTVHRLILSGTPIQNNLTELWSLLDFVCPGRLGTLPVFHSQFAVPI 516
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
G + A++ + A + L ++ L+RR ++ LP K E+V+ K+TD Q+
Sbjct: 517 NVGGYANATNIQVQTAYKCAVVLRDLIAPYLLRRMKTDVATDLPKKEEKVLFCKLTDSQR 576
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-QTGADGFENA 474
Y +KS+ ++ + G + G I L+K+CNHPDL +I + AD +
Sbjct: 577 LHYKGFLKSEELKSILAGKRQSLFG------IDILRKICNHPDLASREILKKTADYY--- 627
Query: 475 MNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL- 533
Y KSGK+ V+ ++ + K + +L Q L++ E
Sbjct: 628 -------YGDPAKSGKM--------QVVKALVDLWK-KQGHRTLLFCQTRQMLEILEDFF 671
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ + KY+R+DG+ I KR +V+T+NK ++ +F+L+++ GG G+NL GANR+++FDP
Sbjct: 672 ANMPDIKYLRMDGTTPISKRQDMVDTYNKDTSYDLFLLTTRVGGLGVNLTGANRVIIFDP 731
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDV 652
DWNP+ D QA R WR GQK+ VYR ++ G+IEEK+ RQ K+ L++ ++ D ++
Sbjct: 732 DWNPSTDLQARERSWRLGQKRNVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILKDAKQ-- 789
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDL 703
R F M+++ LF L++ T + S I+ K P + DD
Sbjct: 790 RRFFKMNDIHDLFSLDDGEGDTTETGMIFSGSEKKIENKKPEKKMKDDDDF 840
>gi|397475294|ref|XP_003809078.1| PREDICTED: DNA excision repair protein ERCC-6 [Pan paniscus]
Length = 1491
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 508 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 562
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 563 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 617
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 618 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 676
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 677 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 736
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 737 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 790
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 791 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 840
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 841 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 899
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 900 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 959
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 960 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1005
>gi|189204870|ref|XP_001938770.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985869|gb|EDU51357.1| DNA repair and recombination protein RAD26 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 1246
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 182/567 (32%), Positives = 288/567 (50%), Gaps = 62/567 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I L+ L L KP+ I
Sbjct: 419 YQKTGVQWLWELYS-----QNVGGIIGDEMGLGKTIQAIGLVAGLHYSKKLTKPV----I 469
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQ--TYGRRPV--- 261
+V P++++K W NE +W RV+ L G + +++L M+ YG
Sbjct: 470 VVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRREDRLEQEMELRKYGDYDTTLT 529
Query: 262 ----------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+LV +Y +++A L E + DEGH+++N +
Sbjct: 530 GAGKAAKKVLEKVKRDGHVLVTTYSGLQTYAEFLIPTEWECAILDEGHKIRNPNTAITIH 589
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI RG + AS+
Sbjct: 590 CKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASN 649
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E A + E L V+ L++R ++ LP K EQV+ K+T Q++ Y + S+
Sbjct: 650 LEFETAVQCAETLKDAVSPYLLQRFKVDVATDLPQKKEQVLFCKLTRQQRQAYEAFLASE 709
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
MK N K M L + L+K+CNHPDL K + G++ Y
Sbjct: 710 ----DMKSIANGKRQM--LFGVDFLRKICNHPDLTEHKTLSKKPGYD---------YGNP 754
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRL 544
+SG K+ V+ +L++ K K +L + + LD+ ++ +S+L + R+
Sbjct: 755 NRSG--------KMQVVKELLSLWK-KGGHKTLLFAQHRIMLDILQKFISQLPDINWRRM 805
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG IK R +V+ FN + +F+L++K GG G+NL GANR++++DPDWNP+ D QA
Sbjct: 806 DGDTPIKDRQNLVDEFNNNPDLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQAR 865
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ +YR +S G+IEEK+ RQ K+ L++ V+ + + F MS+L L
Sbjct: 866 ERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFQMSDLHDL 924
Query: 665 FQLEENTISDTHDKIKCSRCVNGIQVK 691
F L + + + + G +VK
Sbjct: 925 FTL---GVENVEGETETGSLFRGSEVK 948
>gi|4557565|ref|NP_000115.1| DNA excision repair protein ERCC-6 [Homo sapiens]
gi|416959|sp|Q03468.1|ERCC6_HUMAN RecName: Full=DNA excision repair protein ERCC-6; AltName:
Full=ATP-dependent helicase ERCC6; AltName: Full=Cockayne
syndrome protein CSB
gi|182181|gb|AAA52397.1| excision repair protein [Homo sapiens]
gi|27501924|gb|AAO13487.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
gi|119613500|gb|EAW93094.1| hCG32740, isoform CRA_a [Homo sapiens]
gi|119613503|gb|EAW93097.1| hCG32740, isoform CRA_a [Homo sapiens]
Length = 1493
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>gi|426255946|ref|XP_004021608.1| PREDICTED: DNA excision repair protein ERCC-6 [Ovis aries]
Length = 1481
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 170/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 500 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 554
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + +G
Sbjct: 555 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSFTHKKERLVRDIAHCHG----- 609
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 610 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPM 668
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 669 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 728
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 729 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNGE------ 782
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL ++ + + GY + S K++
Sbjct: 783 MQIFSGLVALRKICNHPDLFSGGPKSLKGAPDEELGEDEFGY----------WKRSGKMI 832
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ I R ++ +
Sbjct: 833 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLIARY 891
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 892 NEDTSVFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 951
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 952 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 997
>gi|327286256|ref|XP_003227847.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1310
Score = 268 bits (684), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/568 (31%), Positives = 294/568 (51%), Gaps = 66/568 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQREGV F+Y G+ + G I+AD+MGLGKT+Q I + G + I +
Sbjct: 88 HQREGVAFLY----GLYRDGKKGGILADDMGLGKTIQIIAFL-----SGMFDEEHIKSVL 138
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P++L+ NW E W G RV G AE + L + +G IL+ +
Sbjct: 139 LIVPTTLISNWTKEFASWTPGLRVKVF--HGTCIAERNRNLEWIQRRHG------ILLTT 190
Query: 269 YE----TFRSHASVLHKNEV-GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
Y+ ++ AS +K V + DE H++K ++T +++ + +K R+LL+GTP+Q
Sbjct: 191 YQMVLNNWQQLASFGNKEFVWDYAILDEAHKIKTPSAKTTKSVHAIPSKNRILLTGTPVQ 250
Query: 324 NDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
N+L E ++L F QG +LGT + FR +YE PI R + A+ E+ + E L+ I+
Sbjct: 251 NNLKELWALFDFACQGSLLGTMKTFRMEYENPITRARAKDATPGEKALGLKISENLMSII 310
Query: 383 NRCLIRRTS----------------ALLSK-------YLPVKTEQVVCIKMTDLQKELYT 419
+RR+ AL SK LP K + +V + + +Q+E+Y
Sbjct: 311 KPYFLRRSKDELKKTVNLEQKSNLPALQSKDAAPPMPSLPRKNDFIVWVYLAPIQEEIYR 370
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK------IQTGA----D 469
I D ++ + + L+ + LKKLC+HP L+ + ++T + D
Sbjct: 371 KFISLDHIKELLMTTR------SPLAELNILKKLCDHPRLLSARACSQLGLETSSCYDLD 424
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
G EN N + + S ++LIE S KL+ L +L ++ + ++ S + LD+
Sbjct: 425 GDENEANDV-LHQNIEHLSDQVLIEESGKLLFLVALLDRLQ-EEGHRTLVFSQSRKMLDI 482
Query: 530 FERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRL 588
ER+ R +K +R+DG++T + +R K + F K S +F+L+++ GG GL L A R+
Sbjct: 483 IERILTRRRFKLMRIDGTVTHLTEREKRIGMFQKNSEYSVFLLTTQVGGVGLTLTAATRV 542
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
V+FDP WNPA D QA+ R +R GQK +YR ++ G++EEK+ +RQ K +L
Sbjct: 543 VIFDPSWNPATDAQAVDRAYRIGQKANVVIYRLITCGTVEEKIYRRQVFKDSLIRQSTGE 602
Query: 649 EEDVARHFSMSELRSLFQLEENTISDTH 676
+++ R+FS ELR LF LE+ S T
Sbjct: 603 KKNPYRYFSNQELRELFTLEDPRSSSTQ 630
>gi|330932428|ref|XP_003303771.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1]
gi|311319996|gb|EFQ88126.1| hypothetical protein PTT_16121 [Pyrenophora teres f. teres 0-1]
Length = 1250
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 287/567 (50%), Gaps = 62/567 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L KP+ I
Sbjct: 419 YQKTGVQWLWELYS-----QNVGGIIGDEMGLGKTIQAIGFVAGLHYSKKLTKPV----I 469
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQ--TYGRRPV--- 261
+V P++++K W NE +W RV+ L G + +++L M+ YG
Sbjct: 470 VVCPATVMKQWVNEFHRWWPALRVSILHTSGSGMLDTRREDRLEQEMELRRYGDYDTTLT 529
Query: 262 ----------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+LV +Y +++A L E + DEGH+++N +
Sbjct: 530 GAGKAAKKVLEKVKRDGHVLVTTYSGLQTYAEFLIPTEWECAILDEGHKIRNPNTAITIH 589
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI RG + AS+
Sbjct: 590 CKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASN 649
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E A + E L V+ L++R ++ LP K EQV+ K+T Q++ Y + S+
Sbjct: 650 LEFETAVQCAETLKDAVSPYLLQRFKVDVATDLPQKKEQVLFCKLTRQQRQAYEGFLASE 709
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
MK N K M L + L+K+CNHPDL K + G++ Y
Sbjct: 710 ----DMKSIANGKRQM--LFGVDFLRKICNHPDLTEHKTLSKKPGYD---------YGNP 754
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRL 544
+SG K+ V+ +L++ K K +L + + LD+ ++ S+L + R+
Sbjct: 755 NRSG--------KMQVVKELLSLWK-KGGHKTLLFAQHRIMLDILQKFVSQLPDINWRRM 805
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG IK R +V+ FN + + +F+L++K GG G+NL GANR++++DPDWNP+ D QA
Sbjct: 806 DGETPIKDRQNLVDEFNNSPDLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQAR 865
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ +YR +S G+IEEK+ RQ K+ L++ V+ + + F MS+L L
Sbjct: 866 ERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFQMSDLHDL 924
Query: 665 FQLEENTISDTHDKIKCSRCVNGIQVK 691
F L + + + + G +VK
Sbjct: 925 FTL---GVENVEGETETGNLFRGSEVK 948
>gi|392512974|emb|CAD27013.2| RAD26-LIKE DNA REPAIR AND RECOMBINATION PROTEIN [Encephalitozoon
cuniculi GB-M1]
Length = 687
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 286/543 (52%), Gaps = 65/543 (11%)
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
V L + L P+Q++GV++M D G ++AD+MGLGKT+Q I + LL
Sbjct: 135 VPGFLWSSLFPYQQDGVRWMLRLY-----RDEKGGVLADDMGLGKTIQVIVFLGALLHS- 188
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGR 258
++ KA+I+ P+++V W +E W + F++ +
Sbjct: 189 ----RVVSKALILCPATIVSQWMDE---W-------------------KRFYPFVRIFFG 222
Query: 259 RP---VNPILVISYETFRSHASVLHKNEVGLVLC-DEGHRLKNCESQTYQALMGLKAKRR 314
P + ++SYE F++ KN + VL DEGHR+KN +Q ++ +++ R
Sbjct: 223 FPNEDCEGVYLMSYEKFKAGV----KNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGR 278
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
+LSGTPIQN+L E +S+ FVN G+LG+ F +++E I RG AS+ + KA
Sbjct: 279 FVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRH 338
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L ++ ++RRT + +S LP K +++V +T Q ELY +++S + + + G
Sbjct: 339 SLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGK 398
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVM-DKIQTGADGFENAMNI---------LPTGYAA 484
N LS I+ L+K+CNHP L+ K+ D E A + LP G
Sbjct: 399 ANL------LSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALELP-GADV 451
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
SY L+ S K+ +L +L + + +K+++ S + LD+ ER +R Y Y+R+
Sbjct: 452 SYD----LVSSSCKIKILVDLLKKWR-SEGNKVLVFSQTIRMLDIIERC--VRKYTYLRM 504
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG R +V+ FN+ + F+F+L++K GG GLNL GA+R+V++DPDWNP+ D QA
Sbjct: 505 DGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAK 564
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQKK +YRF+ +IEEK+ Q+Q K L V+ ++R F+ S + L
Sbjct: 565 ERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL-SNPRLSRFFNKSCINEL 623
Query: 665 FQL 667
F
Sbjct: 624 FSF 626
>gi|348570656|ref|XP_003471113.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1263
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 178/572 (31%), Positives = 290/572 (50%), Gaps = 75/572 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 117 LYNQLFEHQKEGIAFLYSLYRDER----KGGILADDMGLGKTVQIIAFL-----SGMFDA 167
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
L+ +++ P++L+ W E +KW G + G SK E LN Q G
Sbjct: 168 SLVHHVLLIMPTNLISMWMKEFSKWTPG-IRVKTFHGPSKNERTRSLNRVQQKNG----- 221
Query: 263 PILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+++ +Y+ +F A V V+ DE H++K+ +++ + + A+
Sbjct: 222 -VIITTYQMLINNWQQLSSFNGQAFVW-----DYVILDEAHKIKSSSTKSAICVRAVPAR 275
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ ER
Sbjct: 276 NRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGERALG 335
Query: 372 NERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVC 407
+ E L+ I+ +RRT ++ K L K E ++
Sbjct: 336 LKISENLMEIIKPYFLRRTKEVVQKKKSDISEVRYTEVNSGVDAICEMPSLSRKNELIIW 395
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV------- 460
I++ LQ E+Y + D ++ +K + L+ I LKKLC+HP L+
Sbjct: 396 IRLVPLQVEIYRKFVSLDHIKELLKET------CSPLAEIGVLKKLCDHPRLLSTRACHL 449
Query: 461 --MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
++ +T A EN N L S+ + L+E S K++ L +L ++ +V
Sbjct: 450 LHLETAKTSAQD-ENKENSLGID-DISHVTDDTLMEESGKMIFLIDLLKRLRDEGHQTLV 507
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGG 577
S Q L++ ERL + + +K +R+DG++T + +R K + F + + +F+L+++ GG
Sbjct: 508 F-SQSRQILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGG 566
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ
Sbjct: 567 VGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVF 626
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
K +L +++ R+FS ELR LF +E+
Sbjct: 627 KGSLIRQTTGDKKNPFRYFSKQELRELFMIED 658
>gi|146416597|ref|XP_001484268.1| hypothetical protein PGUG_03649 [Meyerozyma guilliermondii ATCC
6260]
Length = 1117
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 177/558 (31%), Positives = 289/558 (51%), Gaps = 71/558 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +QR V++++E G I+ DEMGLGKT+Q ++ + L G L KP+I
Sbjct: 320 LFQYQRTCVQWLWELYL-----QKTGGIIGDEMGLGKTIQVVSFIAGLHYSGLLDKPVI- 373
Query: 207 KAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGG--------SKAEIDNKL-------- 249
+V P++++ W NE T W R A L G S+ +I+N +
Sbjct: 374 ---VVVPATVMMQWVNEFHTWWPPLRCAILHSIGSGMSKSALTSEEKIENMMANDDFDLN 430
Query: 250 -NSFM-QTYG--------RRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+ F+ Q G R V+ +L+ +Y R ++ + ++ G + DEGH+++N
Sbjct: 431 EDKFLAQQKGLSNAKNIVDRVVSKGHVLITTYVGLRVYSKYILPHQWGYAVLDEGHKIRN 490
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
S LK R++LSGTPIQN+L+E +SL FV G LGT F +Q+ PI
Sbjct: 491 PNSHITLTCKQLKTHNRIILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFEQQFSIPINM 550
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS+ + + L +++ L+RR + +++ LP K E V+ +K+T Q+++
Sbjct: 551 GGYANASNVQVQTGYKCAVVLRDLISPYLLRRLKSDVAQDLPKKEEMVLFVKLTQYQQDM 610
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + S+ + +KG N L+ + +L+K+CNHPDLV ++ G+
Sbjct: 611 YEKFLSSEDLHAILKGKRN------MLTGVDTLRKICNHPDLVDRELLLRKKGY------ 658
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL---- 533
Y KSGK+L VL +L + + + + +L Q LD+ E+L
Sbjct: 659 ---NYGIPNKSGKML--------VLKGLLQLWQ-SQGHRTLLFCQTKQMLDILEKLLVNL 706
Query: 534 ----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
+ Y+R+DGS I KR +V+ FN +N +F+L++K GG G+NL GA+R++
Sbjct: 707 TRISDGTEYFNYMRMDGSTPISKRQGLVDMFNNNTNYDVFLLTTKVGGLGVNLTGADRVI 766
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
++DPDWNP+ D QA R WR GQK+ +YR ++ G+IEEK+ RQ K L++ ++ +
Sbjct: 767 IYDPDWNPSTDIQARERAWRLGQKRDIVIYRLMTAGTIEEKIYHRQIFKTFLTNKILK-D 825
Query: 650 EDVARHFSMSELRSLFQL 667
R F +++L LF L
Sbjct: 826 PKQRRFFKVNDLHDLFTL 843
>gi|384497021|gb|EIE87512.1| hypothetical protein RO3G_12223 [Rhizopus delemar RA 99-880]
Length = 778
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 173/554 (31%), Positives = 276/554 (49%), Gaps = 82/554 (14%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
G I+ DEMGLGKT+Q I + +L L +++V P++++K W E KW +
Sbjct: 61 GGILGDEMGLGKTIQIIAFLSSLYYSNVLGPG--QASVVVCPATVMKQWVQEFHKWWPPQ 118
Query: 232 VAALPIDGGSKAEIDNKLN-------------------------------------SFMQ 254
A+ GS + N + S +
Sbjct: 119 RIAILHSSGSGIKTGNYTSTDDEESDEEMEEVEEEYEPDRRGGQAKRRKGKRHPARSLLG 178
Query: 255 TYGRRPVNP----------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
T + V+ +L+ +Y +++ VL K+ G V+ DEGH+++N +S+T
Sbjct: 179 TKAGKRVSALVDKYIKLGGVLITTYSGVQTYREVLLKHRWGYVILDEGHKIRNPDSETTL 238
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
A+ K+ R++LSGTPIQN+L E +SL FV G LGT F+ Q+ PI G + A+
Sbjct: 239 AIKQFKSPHRIILSGTPIQNNLKELWSLFDFVFPGRLGTLPIFQSQFSVPISIGGYANAT 298
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + L ++N L+RR ++ LP K EQV+ K+T Q+ Y I+S
Sbjct: 299 NIQVQTAYKCACMLRDLINPYLLRRMKVDVAADLPKKNEQVLFCKLTKPQRRAYLQFIQS 358
Query: 425 ---DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTG 481
DA+ + L I ++K+CNHPDLV AM
Sbjct: 359 KEMDAILERRR---------QVLYGIDIVRKICNHPDLV-----------NLAMTDRNPD 398
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
Y S +SGK++ V+ +L + K +++L Q LD+ ER+ + + Y+Y
Sbjct: 399 YGNSDRSGKMV--------VVKALLKLWK-AQKHRVLLFCQTRQMLDIIERMIRDQEYRY 449
Query: 542 VRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
+R+DG+ I +R +V +N + F+F+L++K GG GLNL GA+R+++FDPDWNP+ D
Sbjct: 450 MRMDGTTPIHQRIAMVNEYNDNKHLFVFLLTTKVGGLGLNLTGADRVILFDPDWNPSTDV 509
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA R WR GQ K +YR +++G+IEEK+ RQ +K+ L++ ++ + R F S L
Sbjct: 510 QARERAWRLGQTKDVTIYRLMTSGTIEEKIYHRQIYKQFLTNKILK-DPKQKRFFDASNL 568
Query: 662 RSLFQLEENTISDT 675
+SLF L +T
Sbjct: 569 QSLFTLASEDAEET 582
>gi|149235383|ref|XP_001523570.1| DNA repair and recombination protein RAD26 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146452979|gb|EDK47235.1| DNA repair and recombination protein RAD26 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 1159
Score = 267 bits (682), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 286/561 (50%), Gaps = 72/561 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 329 LFDYQKTCVQWLWELYL-----QKTGGIIGDEMGLGKTIQIISFIAGLHYSGLLEKPVL- 382
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEID-----NKLNSFMQTYG---- 257
+V P++++ W NE +W + GS D KL FM+ +
Sbjct: 383 ---VVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMSKDKKISEEKLEEFMEDWDPKTS 439
Query: 258 -------RRPVNP------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
+ +N +LV +Y R ++ + + G + DEGH+++N
Sbjct: 440 KSSLKGIKSQINAREILDKVQEKGHVLVTTYVGLRMYSKYILPRQWGYCILDEGHKIRNP 499
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+S +K RV+LSGTPIQN+L E +SL FV G LGT F +Q+ PI G
Sbjct: 500 DSDISLTCKQIKTVNRVILSGTPIQNNLTELWSLFDFVFPGRLGTLPVFEQQFSVPIKIG 559
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ +++ + A + L +++ L+RR +++ LP K E V+ +++T Q+ELY
Sbjct: 560 GYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKKDVAQDLPKKNEMVLFVRLTKEQQELY 619
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
+ S+ + +KG N +G + +L+K+CNHPDL+ + A+ +
Sbjct: 620 EKFLDSEEMDSIVKGKRNVLVG------VDTLRKICNHPDLI----------YREAL-MH 662
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL----- 533
Y KSGK+ VL +L + + + D K +L Q LD+ E+
Sbjct: 663 RANYGDPSKSGKM--------QVLKNLLQLWQ-SEDHKTLLFCQTRQMLDILEKFVANLH 713
Query: 534 ---SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVM 590
+ + + Y+R+DG+ I +R ++V+TFN + + +F+L++K GG G+NL GA+R+++
Sbjct: 714 LLGDESKKFNYLRMDGNTPISRRQQLVDTFNNSPDLHVFLLTTKVGGLGVNLTGADRVII 773
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
+DPDWNP+ D QA R WR GQKK +YR ++TGSIEEK+ RQ K L + ++ +
Sbjct: 774 YDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILK-DP 832
Query: 651 DVARHFSMSELRSLFQLEENT 671
R F S+L LF L + T
Sbjct: 833 KQRRLFKNSDLHDLFSLGDQT 853
>gi|326485451|gb|EGE09461.1| DNA repair and recombination protein RAD26 [Trichophyton equinum
CBS 127.97]
Length = 1035
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 289/559 (51%), Gaps = 63/559 (11%)
Query: 154 GVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAP 213
GVK+++E + G I+ DEMGLGKT+Q I + + L P+ I+V P
Sbjct: 212 GVKWLWELY-----QQQVGGIIGDEMGLGKTIQVIAFLAGIHYSKKLKGPI----IVVCP 262
Query: 214 SSLVKNWCNEITKWLGG-RVAALPIDGG------SKAEIDNKLNSFMQTYGRRPVNP--- 263
+++K W NE +W RV+ L G S+++ +++ S + +G R
Sbjct: 263 PTVMKQWVNEFHRWWPPFRVSILHTSGSGMVNIKSESQAEDRYTSGV--WGDRNSTSQRG 320
Query: 264 ----------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
+LV +Y ++++S+L + + + DEGH+++N ++
Sbjct: 321 NKAARRILKRVLEDGHVLVTTYAGLQTYSSLLIPVDWSIAVLDEGHKIRNPDTSITIHCK 380
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS+ +
Sbjct: 381 ELRTSHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANASNLQ 440
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
A + E L ++ L++R ++ LP K+EQV+ K+T +Q+ Y + S +
Sbjct: 441 VQTAAKCAETLKDAISPYLLQRFKMDVAADLPKKSEQVLFCKLTKVQRAAYEAFLASGEM 500
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYK 487
++G AL I L+K+CNHPDL K +L T +Y
Sbjct: 501 SSILRGRRE------ALYGIDMLRKICNHPDLTQHK-------------VLSTKTDYNYG 541
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVRLDG 546
SG S K+ V+ ++L + K T K +L + + LD+ ER + G+ Y R+DG
Sbjct: 542 SGA----KSGKMQVVKSLLELWK-DTGHKTLLFAQHRIMLDILERFIRGFDGFNYRRMDG 596
Query: 547 SMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA R
Sbjct: 597 NTPIKVRQSMVDEFNNDPDLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARER 656
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+++ LF
Sbjct: 657 AWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQMSDIQDLFT 715
Query: 667 LEENTISDTHDKIKCSRCV 685
L + ++T K + V
Sbjct: 716 LGNDGPTETSQMFKDADIV 734
>gi|58265682|ref|XP_569997.1| DNA supercoiling [Cryptococcus neoformans var. neoformans JEC21]
gi|57226229|gb|AAW42690.1| DNA supercoiling, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 993
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 225/377 (59%), Gaps = 18/377 (4%)
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSGTP+QNDL EY+++V+F G+LG F K YE PIL+ + S + ER
Sbjct: 426 VLSGTPVQNDLGEYWAMVNFACPGVLGKYSAFAKHYEKPILKSRTPNCSAKDVELGRERA 485
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L + ++RRT+A+L YLP K E V+ I + LQ + +NL+ + V ++G
Sbjct: 486 NDLAKLSKEFVLRRTAAVLENYLPPKYEYVIFIAPSLLQLSVLSNLLDPNIVGSFIRG-- 543
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVM---DKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G +L+ I ++K+ N P L+ D++ D +A + + +
Sbjct: 544 ---YGAQSLALIDLMRKISNSPMLLKRRDDELARANDDLGSATSAAISAIPSDANIND-- 598
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+ S K+++LD ML I T++K+V+VSN+T TLDL + L KL+ Y Y+RLDGS K+
Sbjct: 599 VTTSGKMLMLDKMLHSIYQCTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTPPKQ 658
Query: 553 RAKVVETFNKTSNE---FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
R ++V+ FNK F+F+LS+KAGG GLNLIG +RL++FD DWNP+ D QAMAR+ R
Sbjct: 659 RQELVDRFNKDKGRQESFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMARIHR 718
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD---CEEDVAR-HFSMSELRSLF 665
DGQK+P ++YRFL+T +I+EK+ QRQ K LS ++D E+ ++ FS +ELR +F
Sbjct: 719 DGQKRPVYIYRFLTTNAIDEKIYQRQITKTGLSDQMMDQTRTEKQTSKDSFSAAELRDIF 778
Query: 666 QLEENTIS-DTHDKIKC 681
L T THD + C
Sbjct: 779 TLNVRTDGCQTHDLLGC 795
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/179 (44%), Positives = 101/179 (56%), Gaps = 15/179 (8%)
Query: 102 ALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYEC 161
AL +P A A+V+ P L K+ I V VV+DPVL N+LR HQ+EGVKFMY C
Sbjct: 292 ALFNPHAEGAVVMPRP----GEKLAKLKGTTI-VDVVLDPVLGNLLRDHQKEGVKFMYSC 346
Query: 162 VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKN 219
V G+ + GCI+ADEMGLGKTLQ I L++T+L+Q P A +I KAIIV P +LV N
Sbjct: 347 VMGMTGAEGEGCILADEMGLGKTLQTIALIYTMLKQSPFANQTSIIGKAIIVCPVTLVDN 406
Query: 220 WCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN---PILVISYETFRSH 275
W E KW+ RV L D S + N L + VN P ++ Y F H
Sbjct: 407 WRKEFKKWVDRRVNVLVADVLSGTPVQNDLGEYWAM-----VNFACPGVLGKYSAFAKH 460
>gi|258577009|ref|XP_002542686.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
gi|237902952|gb|EEP77353.1| hypothetical protein UREG_02202 [Uncinocarpus reesii 1704]
Length = 1203
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 287/552 (51%), Gaps = 60/552 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I + L L P+ I
Sbjct: 405 YQKTGVQWLWELH-----QQRVGGIIGDEMGLGKTIQVIAFLAGLHYSKKLTGPV----I 455
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI------DNKLNSFM--------- 253
+V P +++K W NE +W RV+ L G I +++L S +
Sbjct: 456 VVCPPTVMKQWVNEFHRWWPPLRVSILHTSGSGMVNIKKESYAEDRLMSEIWEPDRPTRL 515
Query: 254 ---QTYGRRPV------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
Q RR + +L+ +Y +++AS+L + + DEGH+++N ++
Sbjct: 516 PGGQKGARRILKRVLEDGHVLITTYAGLQTYASLLIPVDWSCAILDEGHKIRNPDTAITI 575
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI G + AS
Sbjct: 576 HCKELRTAHRLILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIRTGGYANAS 635
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
+ + A + E L ++ L++R ++ LP KTEQV+ K+T +Q+ Y + S
Sbjct: 636 NLQVQTAAKCAETLKDAISPYLLQRFKIDVAADLPKKTEQVLFCKLTRVQRAAYEAFLGS 695
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ + M+G + G + L+K+CNHPDL + + + Y +
Sbjct: 696 NEMASIMRGRRDVLYG------VDILRKICNHPDLPEHRTLSQKSDY---------NYGS 740
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYVR 543
KSG K+ V+ +++ + K T K +L + + LD+ E+ K L G+ Y R
Sbjct: 741 GVKSG--------KMQVVKSLIELWK-ETGHKTLLFAQHRIMLDILEKFMKSLPGFNYRR 791
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG+ IK R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA
Sbjct: 792 MDGNTPIKIRQSIVDEFNTDPDIHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDLQA 851
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRS 663
R WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ ++ + + F MS+L
Sbjct: 852 RERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFQMSDLHD 910
Query: 664 LFQLEENTISDT 675
LF L + ++T
Sbjct: 911 LFTLGNDGPTET 922
>gi|449329940|gb|AGE96207.1| rad26-like DNA repair and recombination protein [Encephalitozoon
cuniculi]
Length = 695
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 286/543 (52%), Gaps = 65/543 (11%)
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
V L + L P+Q++GV++M D G ++AD+MGLGKT+Q I + LL
Sbjct: 143 VPGFLWSSLFPYQQDGVRWMLRLY-----RDEKGGVLADDMGLGKTIQVIVFLGALLHS- 196
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGR 258
++ KA+I+ P+++V W +E W + F++ +
Sbjct: 197 ----RVVSKALILCPATIVSQWMDE---W-------------------KRFYPFVRIFFG 230
Query: 259 RP---VNPILVISYETFRSHASVLHKNEVGLVLC-DEGHRLKNCESQTYQALMGLKAKRR 314
P + ++SYE F++ KN + VL DEGHR+KN +Q ++ +++ R
Sbjct: 231 FPNEDCEGVYLMSYEKFKAGV----KNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGR 286
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
+LSGTPIQN+L E +S+ FVN G+LG+ F +++E I RG AS+ + KA
Sbjct: 287 FVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRH 346
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L ++ ++RRT + +S LP K +++V +T Q ELY +++S + + + G
Sbjct: 347 SLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGK 406
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVM-DKIQTGADGFENAMNI---------LPTGYAA 484
N LS I+ L+K+CNHP L+ K+ D E A + LP G
Sbjct: 407 ANL------LSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALELP-GADV 459
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
SY L+ S K+ +L +L + + +K+++ S + LD+ ER +R Y Y+R+
Sbjct: 460 SYD----LVSSSCKIKILVDLLKKWR-SEGNKVLVFSQTIRMLDIIERC--VRKYTYLRM 512
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG R +V+ FN+ + F+F+L++K GG GLNL GA+R+V++DPDWNP+ D QA
Sbjct: 513 DGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAK 572
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQKK +YRF+ +IEEK+ Q+Q K L V+ ++R F+ S + L
Sbjct: 573 ERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL-SNPRLSRFFNKSCINEL 631
Query: 665 FQL 667
F
Sbjct: 632 FSF 634
>gi|347836765|emb|CCD51337.1| similar to DNA repair protein Rhp26/Rad26 [Botryotinia fuckeliana]
Length = 1209
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 286/560 (51%), Gaps = 62/560 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 437 YQKTGVQWLSELHN-----QQVGGIIGDEMGLGKTIQMISFLAGLHYSKKLTKPVI---- 487
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNS--------FMQTYGRRP 260
+VAP+++++ W NE +W RV+ L G + N+ + QT + P
Sbjct: 488 VVAPATVLRQWVNEFHRWWPALRVSILHSSGTGMLNVGNEDRLEDDDDEILYGQTTKKAP 547
Query: 261 VNP---------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+ +LV +Y +++++ L + + DEGH+++N +
Sbjct: 548 KSQKLAQKIVDRVVKHGHVLVTTYAGLQTYSNTLINVDWDYAVLDEGHKIRNPNTAVTIY 607
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ RV+LSGTP+QN L+E +SL FV LGT FR+ +E PI G + A++
Sbjct: 608 CKELRTPNRVILSGTPMQNGLVELWSLFDFVFPMRLGTLVNFRQAFEVPIKIGGYANATN 667
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
+ A + E L ++ L++R ++ LP K+EQV+ K+T Q++ Y + SD
Sbjct: 668 LQVLTATKCAETLKDAISPYLLQRLKVDVAADLPKKSEQVLFCKLTRPQRDAYEMFLASD 727
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
++ + + G I L+K+CNHPDL+ +++ D
Sbjct: 728 DMKSILNRSRQSLYG------IDILRKICNHPDLLDKRLKNKPD---------------- 765
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRL 544
YK G S K+ V+ +L + K K +L S Q LD+ E KL G+ Y+R+
Sbjct: 766 YKWGNG--NKSGKMQVVKALLQMWK-GYGHKTLLFSQGVQMLDILEEFVKKLGGFNYLRM 822
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG +K R +V+ FN +F+L++K GG G+NL GANR+++FDPDWNP+ D QA
Sbjct: 823 DGGTAVKDRQTLVDQFNNDPEMHVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQAR 882
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQKK +YR ++ G+IEEK+ RQ K+ L++ ++ + + F+M +L L
Sbjct: 883 ERAWRLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFAMKDLYDL 941
Query: 665 FQL--EENTISDTHDKIKCS 682
F L ++ I++T + K +
Sbjct: 942 FTLGDQDGGITETGEMFKGT 961
>gi|82705590|ref|XP_727033.1| DNA repair protein RAD54 [Plasmodium yoelii yoelii 17XNL]
gi|23482686|gb|EAA18598.1| DNA repair protein RAD54-like-related [Plasmodium yoelii yoelii]
Length = 1163
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 134/324 (41%), Positives = 207/324 (63%), Gaps = 8/324 (2%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ VDP+L+ LR HQREGV+F++EC+ ++ E GCI+AD+MGLGKTLQ I++++TLL+
Sbjct: 244 IEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLLK 303
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
QG K + + +I+ P+SL+ NW +EI KWL R ++ +K +I +KL F Y
Sbjct: 304 QGYNKKAAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDSAKEKIVSKLEGF--KY 361
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ IL+ SYE FR + + K+ + +++CDE HRLKN +++TY ++ L AK+R+L
Sbjct: 362 DLKST--ILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLL 419
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQNDL E+F+L+ N + FRK++ PIL G+D A++ E+ A+ERL
Sbjct: 420 LSGTPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLA 479
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+L I N+ ++RRT+ LLSK LPVK + IK+ +Q+ LY + + +N
Sbjct: 480 ELSTITNKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEALYV----LFLKDKKLLKPDN 535
Query: 437 TKLGMTALSSITSLKKLCNHPDLV 460
+ + L +I L+K+CNHP L+
Sbjct: 536 SNNKVNVLINIKKLEKICNHPLLL 559
Score = 229 bits (583), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/216 (50%), Positives = 146/216 (67%), Gaps = 2/216 (0%)
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
LS+K +L +L IK T+DK+V+VSNYTQTLD E L + YK+VRLDG ++IKKR
Sbjct: 658 LSSKFQLLHFLLKTIKQETNDKVVIVSNYTQTLDYMEILCRENYYKFVRLDGGISIKKRH 717
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
KV+ F T + FIF+LSSK+GGCG+NLI +NRL++ DPDWNPAND QA+ARVWR+GQKK
Sbjct: 718 KVISDFTNTDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKK 777
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
C++YR TG+I+EK+ QRQ K LSS +V S ++ LF + NTI +
Sbjct: 778 ICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVTNTNLSKDQLSDENVKKLFNYKNNTICE 837
Query: 675 THDKIKCSRC--VNGIQVKPPPLESDCTDDLSCWHH 708
THD I+C+RC + +V LE +D++ W H
Sbjct: 838 THDNIECNRCNFKDNTEVYSEQLEDFEEEDVNTWAH 873
>gi|85014197|ref|XP_955594.1| DNA repair and recombination protein [Encephalitozoon cuniculi
GB-M1]
Length = 695
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 179/543 (32%), Positives = 286/543 (52%), Gaps = 65/543 (11%)
Query: 139 VDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
V L + L P+Q++GV++M D G ++AD+MGLGKT+Q I + LL
Sbjct: 143 VPGFLWSSLFPYQQDGVRWMLRLY-----RDEKGGVLADDMGLGKTIQVIVFLGALLHS- 196
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGR 258
++ KA+I+ P+++V W +E W + F++ +
Sbjct: 197 ----RVVSKALILCPATIVSQWMDE---W-------------------KRFYPFVRIFFG 230
Query: 259 RP---VNPILVISYETFRSHASVLHKNEVGLVLC-DEGHRLKNCESQTYQALMGLKAKRR 314
P + ++SYE F++ KN + VL DEGHR+KN +Q ++ +++ R
Sbjct: 231 FPNEDCEGVYLMSYEKFKAGV----KNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGR 286
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
+LSGTPIQN+L E +S+ FVN G+LG+ F +++E I RG AS+ + KA
Sbjct: 287 FVLSGTPIQNNLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRH 346
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L ++ ++RRT + +S LP K +++V +T Q ELY +++S + + + G
Sbjct: 347 SLMLRSLIEPYILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYNRVLESKHIMKVLTGK 406
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVM-DKIQTGADGFENAMNI---------LPTGYAA 484
N LS I+ L+K+CNHP L+ K+ D E A + LP G
Sbjct: 407 ANL------LSGISMLRKVCNHPRLLFPRKLGVSEDCEEEASDEKNGEDEALELP-GADV 459
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
SY L+ S K+ +L +L + + +K+++ S + LD+ ER +R Y Y+R+
Sbjct: 460 SYD----LVSSSCKIKILVDLLKKWR-SEGNKVLVFSQTIRMLDIIERC--VRKYTYLRM 512
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG R +V+ FN+ + F+F+L++K GG GLNL GA+R+V++DPDWNP+ D QA
Sbjct: 513 DGRTPTSSRPGLVDRFNEDEDVFLFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAK 572
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQKK +YRF+ +IEEK+ Q+Q K L V+ ++R F+ S + L
Sbjct: 573 ERAWRYGQKKGVEIYRFVCKDTIEEKVYQKQIFKDLLGKKVL-SNPRLSRFFNKSCINEL 631
Query: 665 FQL 667
F
Sbjct: 632 FSF 634
>gi|73997935|ref|XP_534944.2| PREDICTED: DNA excision repair protein ERCC-6 [Canis lupus
familiaris]
Length = 1486
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 274/527 (51%), Gaps = 39/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 506 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFK 560
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + +G
Sbjct: 561 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTQKKEKLIRDIAHCHG----- 615
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 616 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 674
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 675 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 734
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++T+ Q ++Y N I S V R + G
Sbjct: 735 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTEEQHKVYQNFIDSKEVYRILNGD------ 788
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL + G +N I + K S K++
Sbjct: 789 MQIFSGLVALRKICNHPDLF-------SGGPKNLKTIPDDDEEDQFGYWKR----SGKMI 837
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ I R ++ +
Sbjct: 838 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLITRY 896
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 897 NEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 956
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 957 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1002
>gi|326923687|ref|XP_003208066.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Meleagris gallopavo]
Length = 1498
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 272/538 (50%), Gaps = 41/538 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 504 LFKYQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNY 558
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G + + +G
Sbjct: 559 RYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIASCHG-- 616
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ SY R +H + V+ DEGH+++N + A + R++LSG
Sbjct: 617 ----ILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 672
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L
Sbjct: 673 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 732
Query: 380 GIVNRCLIRRTSA--LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR A +S LP K EQV+ ++TD Q+ +Y N I S V + + G
Sbjct: 733 DAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRRVYQNFIDSKEVYQILNGD--- 789
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL--IEL 495
M S + +L+K+CNHPDL F IL A + +
Sbjct: 790 ---MQVFSGLVALRKICNHPDL-----------FSGGPKILKCLPDADLEEADQFGYWKR 835
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S K++V++++L I +++ + Q L + E + R Y Y+R+DG+ TI R
Sbjct: 836 SGKMIVVESLLK-IWHKQGHRVLFFTQSRQMLQILEVFVRDRNYSYLRMDGTTTIASRQP 894
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
++ +N+ + FIF+L+++ GG G+NL GA+R++++DPDWNP+ D QA R WR GQKK
Sbjct: 895 LITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQ 954
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTIS 673
VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L +S
Sbjct: 955 VTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTLSSPDVS 1011
>gi|118092751|ref|XP_421656.2| PREDICTED: DNA excision repair protein ERCC-6 [Gallus gallus]
Length = 1495
Score = 266 bits (679), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 175/538 (32%), Positives = 273/538 (50%), Gaps = 41/538 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 502 LFKYQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNY 556
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G + + +G
Sbjct: 557 RYQGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAILHETGSYTNKKVKLIREIASCHG-- 614
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ SY R +H + V+ DEGH+++N + A + R++LSG
Sbjct: 615 ----ILITSYSYIRLMQDNIHSYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 670
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L
Sbjct: 671 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLR 730
Query: 380 GIVNRCLIRRTSA--LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR A +S LP K EQV+ ++TD Q+++Y N I S V + + G
Sbjct: 731 DAINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTDEQRQVYQNFIDSKEVYQILNGD--- 787
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL--IEL 495
M S + +L+K+CNHPDL F IL A + +
Sbjct: 788 ---MQVFSGLVALRKICNHPDL-----------FSGGPKILKCVPDADLEEADQFGYWKR 833
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S K++V++++L I +++ + Q L + E + R Y Y+R+DG+ TI R
Sbjct: 834 SGKMIVVESLLK-IWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQP 892
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
++ +N+ + FIF+L+++ GG G+NL GA+R++++DPDWNP+ D QA R WR GQKK
Sbjct: 893 LITRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQ 952
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTIS 673
VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L +S
Sbjct: 953 VTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTLSSPDVS 1009
>gi|219110099|ref|XP_002176801.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411336|gb|EEC51264.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 711
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 271/515 (52%), Gaps = 29/515 (5%)
Query: 168 EDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW 227
++ G I+ DEMGLGKT+Q + + L A + +I++P++++++W NE+ W
Sbjct: 6 QEEAGGIIGDEMGLGKTVQASSFIGVLA-----ASRKLKSVLIISPATMLQHWLNELAVW 60
Query: 228 LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLV 287
G L G E +SF T +++ +YE R + + ++ V
Sbjct: 61 APGLRRILIHQSGEDLETLPS-HSFCGT------GYVVLTTYENVRRNTDIYTEHAWSYV 113
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+ DE +++N ++ A ++ R+ +SGTPIQNDL E +SL FV G LGT F
Sbjct: 114 VLDEAQKIRNPDADITLACKRIRTPHRLAMSGTPIQNDLKELWSLFDFVFPGRLGTLPAF 173
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRT--SALLSKYLPVKTEQV 405
+++ I RG S AS + A L ++N L+RR + +P KTE V
Sbjct: 174 EQEFADTIKRGGYSNASPMQVQLAYRCAMVLRDLINPYLLRRQKKDVIEVSRMPGKTEHV 233
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
+ +++ Q+ LY + SD V + +KG + +++T L+K+CNHPDL D +
Sbjct: 234 LFCRLSQRQRALYEAFLLSDEVTKVVKGSKQL------FAAVTMLRKICNHPDLACDPDE 287
Query: 466 TGADGF-------ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
+ F + ++ + + K L+E S KL VL +L + K +++
Sbjct: 288 ASFESFVRNGYVNQGDLDEDLSDLDSDIGEEKSLVERSGKLEVLSKILPLWK-KQGHRVL 346
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGC 578
+ + + LD+ ERL L+ +K+ RLDG+ + R ++V+ FN + F + +++ GG
Sbjct: 347 IFCQWRKMLDIIERLIMLKEWKFGRLDGNTNVASRQRLVDQFNSDESYFGMLCTTRTGGV 406
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GLNL GANR++++DPDWNP D QA R WR GQ++ VYR ++ G+IEEK+ QRQ K
Sbjct: 407 GLNLTGANRIILYDPDWNPQTDAQARERAWRFGQEREVTVYRLITAGTIEEKIYQRQIFK 466
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTIS 673
ALS+ V+ + R FS +LR LF L+ + S
Sbjct: 467 TALSNKVLQ-DPRQRRLFSQKDLRDLFTLKADAGS 500
>gi|117558161|gb|AAI27105.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6 [Homo sapiens]
Length = 1493
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 273/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFCTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>gi|351700010|gb|EHB02929.1| DNA excision repair protein ERCC-6 [Heterocephalus glaber]
Length = 1488
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 273/534 (51%), Gaps = 45/534 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-----------LRQG 198
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L RQ
Sbjct: 508 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQV 562
Query: 199 PLAKPL--IDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQT 255
L + + IIV P++++ W E T W RVA L G +N +
Sbjct: 563 LLCRLFEGLGPTIIVCPTTVMHQWVKEFHTWWPSFRVAILHETGSCTHRKENLIRDIAHC 622
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G IL+ SY R + V+ DEGH+++N + A + R+
Sbjct: 623 HG------ILITSYSYIRLMQDDFSRQNWHYVILDEGHKIRNPNAAVTLACKQFRTPHRI 676
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSG+P+QN+L E +SL FV G LGT F +Q+ PI G + AS + A +
Sbjct: 677 ILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCA 736
Query: 376 EQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
L +N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V + + G
Sbjct: 737 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFINSKEVYKILNG 796
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
M S I +L+K+CNHPDL G + LP + G
Sbjct: 797 E------MQLFSGIVALRKICNHPDLF--------SGGPKNLGGLPDDELEEDQFG--YW 840
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S K++V++++L I +++L S Q L + E + + Y Y+++DG+ TI R
Sbjct: 841 KRSGKMIVVESLLK-IWHKQGQRVLLFSQSRQMLHILEVFLRAQKYSYLKMDGTTTIASR 899
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK
Sbjct: 900 QPLIARYNEDASIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQK 959
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+ VYR L G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 960 RQVTVYRLLMAGTIEEKIYHRQIFKQFLTNRVLK-DPKPRRFFKSNDLYELFTL 1012
>gi|367010744|ref|XP_003679873.1| hypothetical protein TDEL_0B05330 [Torulaspora delbrueckii]
gi|359747531|emb|CCE90662.1| hypothetical protein TDEL_0B05330 [Torulaspora delbrueckii]
Length = 1057
Score = 265 bits (677), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 286/564 (50%), Gaps = 78/564 (13%)
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
++L +Q+ V+++YE + G I+ DEMGLGKT+Q I + L L P+
Sbjct: 277 SLLFNYQKTCVQWLYELY-----QQKCGGIIGDEMGLGKTIQVIAFLAALHHSDMLDGPV 331
Query: 205 IDKAIIVAPSSLVKNWCNEITKW---------------LGGR--VAALPIDG-------- 239
+ IV P++++K WCNE+ W +G + +A ++G
Sbjct: 332 L----IVCPATVMKQWCNELHHWWPPLRAVILHAIGSGMGNKKSIAEEDLEGLIMSSDPS 387
Query: 240 -------GSKAEIDNKL--NSFMQTYGRRPVNP--ILVISYETFRSHASVLHKNEVGLVL 288
+ A++ KL N+ MQ+ + VN IL+ +Y R H +L G +
Sbjct: 388 QFSYEDFNNSAKVKGKLESNNNMQSLVDKVVNDGHILITTYVGLRIHRDILLNVNWGYAV 447
Query: 289 CDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFR 348
DEGH+++N +S LK R++LSGTPIQN+L E +SL F+ G LGT F+
Sbjct: 448 LDEGHKIRNPDSDISLTCKRLKTHHRIILSGTPIQNNLNELWSLFDFIFPGKLGTLPVFQ 507
Query: 349 KQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
+Q+ PI G + A++ + + L +++ L+RR A ++K LP K E V+
Sbjct: 508 QQFVQPISMGGYANATNVQVQAGYKCAVALRDLISPYLLRRVKADVAKDLPEKKEMVLFC 567
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA 468
K+T Q++ Y + S + + G G I L+K+CNHPDL +D+ +
Sbjct: 568 KLTQFQRKKYLEFLHSKELDQIKTGKRQVLFG------IDILRKICNHPDL-LDREE--- 617
Query: 469 DGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
+ ASY K S K+ V+ +L ++ K +L + Q LD
Sbjct: 618 -----------KRHQASYGDPK----RSGKMQVVKQLL-LLWHKQHHKTLLFTQSRQMLD 661
Query: 529 LFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLI 583
+ E L G K++R+DG+ I R +V+ FN + +F+L+++ GG G+NL
Sbjct: 662 ILEEFVSFKDESLSGLKFLRMDGTTNISTRQSLVDEFNNGDYD-VFLLTTRVGGLGVNLT 720
Query: 584 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS 643
GANR+++FDPDWNP+ D QA R WR GQK+ +YR + TGSIEEK+ RQ K+ L++
Sbjct: 721 GANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVTGSIEEKIYHRQIFKQFLTN 780
Query: 644 CVVDCEEDVARHFSMSELRSLFQL 667
++ + R F ++EL+ LF L
Sbjct: 781 KIL-SDPKQKRFFKVNELQDLFSL 803
>gi|354465787|ref|XP_003495358.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cricetulus
griseus]
Length = 1478
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 275/527 (52%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 503 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 557
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E W RVA L G + + + + +G
Sbjct: 558 GLGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHETGSYAHKKERLVRDIVHCHG----- 612
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+L+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 613 -VLITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 671
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 672 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 731
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G EN
Sbjct: 732 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNG-ENQ--- 787
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
S + +L+K+CNHPDL G ++ LP + G + S K++
Sbjct: 788 --IFSGLVALRKICNHPDLF--------SGGPKNLSGLPEDELEEDQFG--YWKRSGKMI 835
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q L + E + Y Y+++DG+ TI R ++ +
Sbjct: 836 VVESLLK-IWHKQGQRVLLFSQSRQMLHILEVFLRAHKYSYLKMDGTTTIASRQPLITKY 894
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 895 NEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 954
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 955 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1000
>gi|308512703|gb|ADO33005.1| cockayne syndrome protein [Biston betularia]
Length = 954
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 297/548 (54%), Gaps = 36/548 (6%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
+K ++Q ++V + L QR GVK+++E + G ++ DEMGLGKT+Q I
Sbjct: 161 EKHELQNGLLVPNFIWKQLYKFQRTGVKWLWELH-----QVQAGGMLGDEMGLGKTIQII 215
Query: 189 TLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNK 248
+ L + + +IIVAP++++ W + W A+ GS A NK
Sbjct: 216 AFLAGLSNTDMGSWGGLGPSIIVAPATVIYQWVSHFHFWCPHLRVAVLHHSGSHAGNHNK 275
Query: 249 L-NSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
L ++G I++I+Y ++ L + ++ DEGH+++N ++Q + +
Sbjct: 276 LIRDLHDSHG------IVLITYAGIVKYSKDLMSRKWHYIILDEGHKIRNPDTQVSKLVK 329
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
+ ++L++G+P+QN+L E +SL F+ G+LGT F + + PI +G + A++ +
Sbjct: 330 KFETPHKLLITGSPMQNNLQELWSLFDFMRPGLLGTYNAFMEHFAQPITQGGYANATEFQ 389
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSD 425
A E + L I+ ++RRT + + ++ LP K EQV+ +T Q++LY + S
Sbjct: 390 EATAMEIAKALKIIITPYMLRRTKSEVQEHIKLPEKNEQVLFCALTREQRDLYMGYLMST 449
Query: 426 AVRRTM----KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTG 481
VR + K GE + M L ++++L+K+CNHPDL + + Q E+ I
Sbjct: 450 TVRSILDKENKYGEPLRARM--LVALSTLRKICNHPDLYLYEAQ------EDLEAIDEEK 501
Query: 482 YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKY 541
+ +SGK+ V++++L + + + ++ S L + E+ + + +KY
Sbjct: 502 FGHWKRSGKM--------TVVNSLLKIWQ-KQGHRALIFSQSRAMLCVLEQYLQSQNFKY 552
Query: 542 VRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
+++DGS+ + +R +++TFN+ + +F+ +++ GG G+NL GA+R++++DPDWNPA DD
Sbjct: 553 LKMDGSVLVSQRQSLIKTFNENAEYLVFLSTTRVGGLGVNLTGADRVIVYDPDWNPATDD 612
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSEL 661
QA R WR GQ++ VYR L G+IEEK+ QRQ K LS+ ++ + + + S L
Sbjct: 613 QAKERAWRIGQERTVTVYRLLCAGTIEEKIYQRQIFKHFLSNKIL-VDPNQKNVLTTSTL 671
Query: 662 RSLFQLEE 669
+ LF EE
Sbjct: 672 QGLFNYEE 679
>gi|395858719|ref|XP_003801707.1| PREDICTED: DNA excision repair protein ERCC-6 [Otolemur garnettii]
Length = 1490
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/547 (31%), Positives = 278/547 (50%), Gaps = 41/547 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 509 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRYE 563
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + + +G
Sbjct: 564 GLGPTIIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDIAHCHG----- 618
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 619 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 677
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL FV G LGT F +Q+ PI G + AS + A + L +
Sbjct: 678 QNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTI 737
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V + G
Sbjct: 738 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKIYQNFVDSKEVYGILNGE------ 791
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 792 MQIFPGLIALRKICNHPDLF--------SGGTKNLKGLPEDELEEDQFG--YWKRSGKMI 841
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 842 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 900
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 901 NEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 960
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L T DT +
Sbjct: 961 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFSL---TSPDTSQSTE 1016
Query: 681 CSRCVNG 687
S G
Sbjct: 1017 TSAIFAG 1023
>gi|291233864|ref|XP_002736872.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Saccoglossus
kowalevskii]
Length = 1503
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 275/533 (51%), Gaps = 43/533 (8%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GVK+++E G I+ DEMGLGKT+Q I+ + L K D
Sbjct: 533 LYKYQKTGVKWLWELHC-----QQTGGIVGDEMGLGKTIQIISFLSGLKYSKLQIKG--D 585
Query: 207 KAI------IVAPSSLVKNWCNEITKWLGG-RVAALPIDG---GSKAEIDNKLNSFMQTY 256
K I IV P++++ W E W RVA G GSKA + + +++
Sbjct: 586 KYIGLGPVLIVCPTTVMHQWVREFHTWYPDFRVAIFHDSGSYSGSKASL---VYDIVKSR 642
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
G +LV SY R +L + + V+ DEGH+++N ++ QA + R++
Sbjct: 643 G------VLVTSYAAVRIQQDMLLRYQWDYVILDEGHKIRNPDADVTQACKQFRTPHRII 696
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSG+P+QN+L E +SL FV G LGT F +++ PI G S ASD + A +
Sbjct: 697 LSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMQEFSVPITMGGYSNASDVQVQTAYKCAC 756
Query: 377 QLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L +N L+RR ++ LP K EQV+ ++T Q ++Y I S + G
Sbjct: 757 VLRDTINPYLLRRMKQDVKVNLNLPDKNEQVLFCRLTPEQVDVYKEYIDSGECHAILTGR 816
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
+ + +L+K+CNHPD+ + +E+ +I +K
Sbjct: 817 ------YKVFAGLITLRKICNHPDISTGGPRVLKGDYEHDDDIPEEMRYGYWKK------ 864
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
S KL+V++++L + K +++L + Q LD+ + RGY Y+R+DGS I R
Sbjct: 865 -SGKLIVIESLLKLWK-KQGHRVLLFTQSKQMLDILDSFVTSRGYNYMRMDGSTPISSRQ 922
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
V FN+ + F+F+L+++ GG G+NLIGA+R+V++DPDWNP+ D QA R WR GQ K
Sbjct: 923 PAVNRFNQDKSVFVFLLTTRVGGLGVNLIGADRVVIYDPDWNPSTDMQARERAWRIGQNK 982
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+YR L++G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 983 QVTIYRLLTSGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKTNDLHELFTL 1034
>gi|198420785|ref|XP_002121862.1| PREDICTED: similar to DNA excision repair protein ERCC-6
(ATP-dependent helicase ERCC6) (Cockayne syndrome
protein CSB) [Ciona intestinalis]
Length = 1155
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 284/533 (53%), Gaps = 37/533 (6%)
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLL------RQG 198
N L +Q+ GVK+++E T G ++ DEMGLGKT+Q I+ + L R
Sbjct: 7 NKLYKYQQTGVKWLWELHT-----QHVGGVLGDEMGLGKTVQIISFLAGLHNSKIRDRDA 61
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYG 257
+ + +I+AP+++++ W E WL RVA L G + ++ +N+ + + G
Sbjct: 62 SYSYDGLGPVLIIAPATVMQQWLREFHTWLPLVRVAILHSSGSHRGSKNDLINNMVLSRG 121
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
+L+ SYE R +L V+ DEGH+++N ++ A+ R++L
Sbjct: 122 ------VLITSYERARLSIDMLMTKGWHYVILDEGHKIRNPQAAVTHAVKRFPTPHRIIL 175
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SG+PIQN L E +SL F+ G LGT F +Q+ PI++G + AS+ + A +
Sbjct: 176 SGSPIQNHLQELWSLFDFIYPGKLGTLPVFMEQFSVPIVQGGYANASEVQVETAYKCACV 235
Query: 378 LIGIVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L ++ L+RR + + LP K++QV+ +TD Q ++Y + SD V +
Sbjct: 236 LRDTISPYLLRRMKVDVQSHIKLPPKSDQVLFCSLTDEQVDVYKEYLDSDIVHSILCRRA 295
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
+G+ L+K+CNHPDL TG G + + GY S + G
Sbjct: 296 KIFVGLI------QLRKICNHPDLF-----TG--GHKLMVGEATPGYGDSRRFG--YWRR 340
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S K++V++++L + K K++L + + L + E K R Y Y+ + G +++ R
Sbjct: 341 SGKMVVVESLLRIWK-KQGKKVLLFTQSRKMLGILEDFVKSRSYCYLTMHGQTSVQARQP 399
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
+V+ FN+ + F+F+L+++ GG G+NLIGA+R+V++DPDWNP+ D QA R WR GQ K
Sbjct: 400 LVKKFNEDPSIFVFILTTRVGGLGVNLIGADRVVIYDPDWNPSTDTQAQERSWRIGQTKQ 459
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
+YR +++G+IEEK+ RQ K+ +++ V+ + R F +++ LF L+
Sbjct: 460 VTIYRLVTSGTIEEKIYHRQIFKQFMTNRVLK-DPKQRRFFKSNDVHELFTLK 511
>gi|224052526|ref|XP_002188227.1| PREDICTED: DNA excision repair protein ERCC-6 [Taeniopygia guttata]
Length = 1449
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 178/575 (30%), Positives = 288/575 (50%), Gaps = 42/575 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 464 LFKYQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSNMRTRGSNY 518
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G ++ +G
Sbjct: 519 RYQGLGPTVIVCPATVLHQWVKEFHTWWPPFRVAVLHETGSYTKSKVKLIHEIASCHG-- 576
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ SY R +H + V+ DEGH+++N + A + R++LSG
Sbjct: 577 ----ILITSYSYIRLMQDDIHTYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSG 632
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL F+ G LGT F +Q+ PI G AS + A + L
Sbjct: 633 SPMQNNLKELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVKTAYKCACVLR 692
Query: 380 GIVNRCLIRRTSA--LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR A +S LP K EQV+ ++T+ Q+++Y N I S V + + G
Sbjct: 693 DTINPYLLRRMKADVKMSLSLPDKNEQVLFCRLTEEQRQIYQNYINSKEVYQILNGD--- 749
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
M L +++L+K+CNHPD V D + +A P + +SGK++
Sbjct: 750 ---MQILLGLSTLRKICNHPDFVADSPRI-LKSVPDAEAEDPNQFGYWKRSGKMI----- 800
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
V++++L I +++ + Q + + E + R Y Y+R+DG+ + R +V
Sbjct: 801 ---VVESLLK-IWHKQGHRVLFFTQSRQMMQILEVFVRYRNYSYLRMDGTTAVASRQPLV 856
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+N+ + F+F+L+++ GG G+NL+GA+R++++DPDWNP+ D QA R WR GQKK
Sbjct: 857 TKYNEDKSIFLFLLTTRVGGIGVNLVGADRVIIYDPDWNPSVDTQARERAWRIGQKKEVT 916
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD-TH 676
VYR L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L +S T
Sbjct: 917 VYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQNRFFKSNDLYELFTLNSPDVSQGTE 975
Query: 677 DKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTE 711
+ + +QV PP D+ HV E
Sbjct: 976 TSAIFAGTGSDVQVPKPPANGTSKCDV----HVAE 1006
>gi|326429518|gb|EGD75088.1| Rad54b protein [Salpingoeca sp. ATCC 50818]
Length = 1070
Score = 265 bits (677), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 148/365 (40%), Positives = 213/365 (58%), Gaps = 24/365 (6%)
Query: 105 DPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTG 164
DP AP ALV+ P + H + V VVVDP L LRPHQR GV+F++ V G
Sbjct: 283 DPNAPGALVINHPAG-AKHQV---------VPVVVDPHLGVHLRPHQRVGVEFLWHSVVG 332
Query: 165 VRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEI 224
+ GCI+ DEMGLGKTLQCITL+WT L+Q KPL + ++V P SLV+NW E
Sbjct: 333 KPHVEGQGCILGDEMGLGKTLQCITLIWTALKQNHDGKPLARRVMVVCPGSLVRNWEQEF 392
Query: 225 TKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
KWLG R+ + K + ++ + V +L++SYE + + + K
Sbjct: 393 RKWLGRERIKVFVV----------KADKPVREFAAASVFSVLLLSYEMLLRNIADVSKLN 442
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
+ +V+CDE HRLKN ++T A+MGL+A+RR+ L+GTPIQNDL E+F++V F N GILGT
Sbjct: 443 LDIVVCDEAHRLKNTSAKTTMAMMGLRARRRIALTGTPIQNDLQEFFAIVDFCNPGILGT 502
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
FR+ YE PIL + A+ AER + R +L +++ +RRT + YLP K++
Sbjct: 503 QATFRRVYERPILESRQPTATPAERKLGDARATELTRMISSFCLRRTKEINLSYLPPKSD 562
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
V+ + + Q +LY L++S AV+ ++G + + L IT+LK LCN P ++ K
Sbjct: 563 YVLFCRPSQTQLQLYRALLRSTAVKSCLQGRLSAG---SHLVIITALKTLCNSPTILCRK 619
Query: 464 IQTGA 468
Q A
Sbjct: 620 GQPDA 624
Score = 182 bits (462), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/198 (46%), Positives = 135/198 (68%), Gaps = 11/198 (5%)
Query: 493 IELSAKLMVLDTMLAVIKM-TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
+ L K+ +L ML + ++++++VSN T+ L + L + Y ++RL G+
Sbjct: 699 VSLCGKMQLLSHMLQHWRAHPANERVLIVSNSTKVLSRVQALCEQCAYPFLRLQGNTPTH 758
Query: 552 KRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
KR ++V FN + ++F+F++SSKAGG GLN++GA+RL+++D DWNPAND QAMARVWRD
Sbjct: 759 KRLELVNRFNSRVRDDFVFLMSSKAGGVGLNIVGASRLILYDTDWNPANDLQAMARVWRD 818
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE--------EDVARHFSMSELR 662
GQK+ +VYRFL+TG+IEEK+ QRQ HK+ LS VVD + + VA FSM EL+
Sbjct: 819 GQKRHVYVYRFLTTGTIEEKIYQRQVHKQGLSGSVVDKQGSKKTAGTKQVA-GFSMEELK 877
Query: 663 SLFQLEENTISDTHDKIK 680
+F L E+T SDT+D +K
Sbjct: 878 DIFSLREDTKSDTNDLLK 895
>gi|270010822|gb|EFA07270.1| hypothetical protein TcasGA2_TC013301 [Tribolium castaneum]
Length = 1294
Score = 265 bits (677), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 185/590 (31%), Positives = 305/590 (51%), Gaps = 87/590 (14%)
Query: 137 VVVDPVLSNILRPHQREGVKFM----YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VD L+ +L+PHQ+ G++FM YE V ++ + GCI+A MGLGKTLQ ITL+
Sbjct: 641 VTVDHKLAKMLKPHQKSGIQFMWEACYESVEILKTKPGSGCILAHCMGLGKTLQVITLIH 700
Query: 193 TLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-----RVAALPIDGGSKAEIDN 247
TL P+ K ++V P S V NW NE K + I G +E N
Sbjct: 701 TLFTH-PVTK--TKHVLVVCPLSTVINWKNEFKKAFKQLDNPPDIYPYWIIKGDISEKIN 757
Query: 248 KLNSFMQTYGRRPVNPILVISYETFR---SHASVLHKNEV--------------GLVLCD 290
++++ QT G +L++ Y+ ++ + + L V L++CD
Sbjct: 758 IIHTWRQTGG------VLILGYDAYQIITNEKTALRITAVEKQRALEALVDPGPDLIVCD 811
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGH+LKN ++ QALM +K KRR++L+GTP+QN+L EY+ +V FV +LGT E+ +
Sbjct: 812 EGHQLKNGKTLKTQALMKVKTKRRIVLTGTPLQNNLKEYYFMVQFVKPHLLGTYLEYTNR 871
Query: 351 YETPILRGQ--DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCI 408
+ +PI+ GQ DS D + K +R L ++ + R ++LS YLP T+ + I
Sbjct: 872 FASPIMNGQFHDSTPGDIKLMK--KRTHVLTKMLKNTIHRVEGSVLSTYLPEITDYTIFI 929
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN-HP---------D 458
K+T LQ +LYT I + G+ + L T + + CN HP
Sbjct: 930 KLTPLQIDLYTRYID-------LVTGQASNLSSTFFHDV-RMTNFCNLHPYALHLHYSKP 981
Query: 459 LVMDKIQTGA-----DGFENAM---------NILPTGYAASYKSGKLLIELSAKL-MVLD 503
+ K +T +G +N + N+LP + + I S K+ ++LD
Sbjct: 982 TLKRKAKTAGLIENLEGDDNNVEHIRADWYKNLLPADVSTN-------INYSTKIKLILD 1034
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYK----YVRLDGSMTIKKRAKVVE 558
+ M ++K+++ Y LD+ E L + R ++ Y R+DG +++ R + +
Sbjct: 1035 IISEC--MRNNEKVLIFGQYLVELDIVEHFLKQFRNWRPNVDYYRMDGDTSVENRDILCK 1092
Query: 559 TFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
FN +F+L+ K GG GLNL GANR+++ + NP++D Q++ RV+R GQ++ C+V
Sbjct: 1093 KFNSNPTSKVFLLTHKVGGLGLNLTGANRVILIGSNHNPSHDSQSLYRVYRFGQERKCYV 1152
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
YR +S G++EEK+ R K ++S VVD + R + ++L+ +++ +
Sbjct: 1153 YRLVSLGTMEEKIYHRCVLKLSISGTVVD-KLHFDRRYKTTDLKEMYKYD 1201
>gi|360044828|emb|CCD82376.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1393
Score = 265 bits (676), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 175/562 (31%), Positives = 285/562 (50%), Gaps = 73/562 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL---------LRQ 197
L +QR+GVK++++ + G I+ DEMGLGKT+Q I L+ L R
Sbjct: 277 LFDYQRKGVKWLWDLH-----QKGCGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRSYRL 331
Query: 198 GPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTY 256
GP +IV P++++ W +E W RVA L G K N MQ
Sbjct: 332 GP--------TLIVCPATVLNQWMSEFHSWWPPIRVAILHSTGSGYG----KPNKLMQMI 379
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
P +L+ +Y T ++ +L V+ DEGH++KN E++ A+ R++
Sbjct: 380 TNNP-GSVLLTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLI 438
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSG+PIQN+L E +SL FV G LG EF +Q+ PI +G + AS + A +
Sbjct: 439 LSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCAC 498
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L ++ LIRR A + LP K+EQV+ ++TD Q++LY ++S + + G N
Sbjct: 499 TLRNLLKPYLIRRLKADVQIQLPAKSEQVLFCRLTDYQQKLYREYLESQVCKDLLNGKGN 558
Query: 437 TKLGMTALSSITSLKKLCNHPDLVM----------DKIQTGADGFENA-MNILPTGYAAS 485
S+ L+ LCNHPDL ++ ++ G EN ++ + +
Sbjct: 559 I------FPSLILLRNLCNHPDLATGGPRDSCFLNEEFESDKQGIENVCLSYSWSRFGCP 612
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLVSNYTQTLDLFERLSKLRGYKYVR 543
+S K+L+ + +++K D K++L S + L L ERL +L + Y+R
Sbjct: 613 RRSSKMLV-----------VASLLKNWYDQGHKVLLFSQSRRMLTLLERLVQLMKFSYLR 661
Query: 544 LDGSMTIKKRAKVVETFN-----------KTSNE---FIFMLSSKAGGCGLNLIGANRLV 589
+DG+ + +R +++ FN +TS+ F+F+L+++ GG G+NL ANR++
Sbjct: 662 MDGTTPVSQRHELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVL 721
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
++DPDWNP D QA R WR GQ + +YR L++G+IEEK+ RQ K+ L++ ++
Sbjct: 722 IYDPDWNPTTDLQARERAWRIGQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILKNP 781
Query: 650 EDVARHFSMSELRSLFQLEENT 671
R F ++L+ L E+ +
Sbjct: 782 RQ-QRFFKTNDLQELLTFEDES 802
>gi|213408929|ref|XP_002175235.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275]
gi|212003282|gb|EEB08942.1| SNF2 family helicase Rhp26 [Schizosaccharomyces japonicus yFS275]
Length = 983
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 278/538 (51%), Gaps = 68/538 (12%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q + + +L KP ++V P++L+K W E +W
Sbjct: 292 GGIIGDEMGLGKTVQIVAYLASLHYSRKFDKP----TLVVCPATLMKQWVGEFHRWWAPF 347
Query: 231 RVAALPIDG---GSKAE----------------------IDNKLNSFMQT------YGRR 259
RV L G SK E D ++N ++ + +
Sbjct: 348 RVVILHSTGSGLNSKREGRDYKDSASEGEDEEEESVLEAEDERVNPLRRSSASFHKFAEK 407
Query: 260 PVNP------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
++ IL+ +Y R ++ +L E G + DEGH+++N +++ L+
Sbjct: 408 LIDSTFERGHILITTYAGLRIYSDLLLPREWGYCILDEGHKIRNPDAEISILSKQLRTVN 467
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R++LSGTPIQN+L E ++L F+ G LGT F+ Q+ PI G + A++ + + +
Sbjct: 468 RIILSGTPIQNNLTELWNLFDFIFPGRLGTLPVFQNQFALPINIGGYANATNIQVQTSYK 527
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
L +++ L+RR ++ LP K+EQV+ K+T Q+ Y + S + + + G
Sbjct: 528 CACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPEQRIAYQQFLNSGDMNKILNG 587
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
G + L+K+CNHPDLVM + +G+E Y KSGKL
Sbjct: 588 KRQVLFG------VDVLRKICNHPDLVMREFLEHKEGYE---------YGDPKKSGKL-- 630
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDGSMTIKK 552
V+ +L + K + + + +L S Q LD+ E+ + + Y R+DG+ +I
Sbjct: 631 ------KVVQALLKLWK-SQNHRTLLFSQTRQMLDILEKAIGSMGDISYCRMDGTTSIGL 683
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +V+ FNKTS +F+L+++ GG G+NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 684 RQGLVDEFNKTSRYDVFLLTTRVGGLGINLTGADRVIIFDPDWNPSTDAQARERAWRLGQ 743
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
K+ VYR +S+G+IEEK+ RQ K+ L++ ++ + + R F M++L LF L+E+
Sbjct: 744 KRDVVVYRLMSSGTIEEKIYHRQIFKQFLTNKILK-DPNQRRFFKMNDLHDLFTLDED 800
>gi|307191137|gb|EFN74835.1| DNA excision repair protein ERCC-6 [Camponotus floridanus]
Length = 983
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 277/534 (51%), Gaps = 38/534 (7%)
Query: 149 PHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW-----TLLRQGPLAKP 203
P + V++++E + G +M DEMGLGKT+Q I + LL +
Sbjct: 197 PSDNDSVQWLWELHSR-----KLGGLMGDEMGLGKTVQVIAFLAGLDCSELLSHNGRYRG 251
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
L I+V P++L++ W W RV L GG + ++ + S +QT G
Sbjct: 252 L-GPTIVVCPATLMEQWVKHFHDWWPFFRVVVLHHSGGYNGDPESLIES-LQTGG----- 304
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
ILV SY H +L ++ V+ DEGH+++N +++ +A+ R+LLSG+P+
Sbjct: 305 -ILVTSYNGILKHKDLLVSSQWHYVILDEGHKIRNPQAKVSRAVKQFSTPHRLLLSGSPM 363
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN L E +SL F+ G LGT F + TPI RG + A+ + A + L +
Sbjct: 364 QNSLKELWSLFDFILPGKLGTLPVFLEHCATPITRGGYANATSLQEATALQVATMLKDTI 423
Query: 383 NRCLIRRTSALLSKYL--PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
++RRT + +L P K EQV+ +TD QK+LY + S+ V + N G
Sbjct: 424 TPYMLRRTKNDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSEDVTFILHEKNNHDTG 483
Query: 441 ---MTALSSITSLKKLCNHPDLVM--DKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
L ++++L+K+CNHPDL + + + D + + GY +
Sbjct: 484 RYRARFLIALSALRKICNHPDLFLYTREFDSDEDITLSEEQLEKFGY----------WKR 533
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
+ K+ V+ ++L I +++L + Q + + E L + GY Y+R+DG+ + +R +
Sbjct: 534 AGKMNVVRSLLK-IWHKQQHRVLLFTQGRQMMHILESLLQREGYTYLRMDGTTAMSQRQQ 592
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
+ TFN + F+F+L+++ GG G+NLIGA+R++++DPDWNPA D QA R WR GQ K
Sbjct: 593 TIHTFNNRPSYFVFLLTTRVGGLGVNLIGADRVIIYDPDWNPATDAQARERAWRIGQNKQ 652
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
VYR ++ G+IEEKM RQ K LS+ V+D + R F ++L LF L E
Sbjct: 653 VTVYRLITAGTIEEKMYHRQIFKLLLSNKVLD-DPRQRRLFKTTDLVELFNLNE 705
>gi|448116169|ref|XP_004202990.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
gi|359383858|emb|CCE79774.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
Length = 1116
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/587 (30%), Positives = 289/587 (49%), Gaps = 86/587 (14%)
Query: 133 IQVH-VVVDPVLSNILR----------PHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
+VH + D VL++ R +Q+ V++++E T G I+ DEMGL
Sbjct: 291 FKVHPTISDAVLNDSFRLPGDIYPSLFDYQKTCVQWLWELYT-----QKTGGIIGDEMGL 345
Query: 182 GKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWL------------G 229
GKT+Q I+ + L +K L D +IV P++++ W NE +W
Sbjct: 346 GKTIQVISFIAGL----HYSKRLEDPVLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGS 401
Query: 230 GRVAAL-----------------PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETF 272
G AL ++ S +N+L + IL+ +Y
Sbjct: 402 GMNKALISKEEKMEELLENADPFSVNKSSLKSYENELKAKDIVDSVFQKGHILITTYVGL 461
Query: 273 RSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSL 332
R ++ + + G + DEGH+++N +S+ +K RV+LSGTPIQN+L+E +SL
Sbjct: 462 RIYSKYILPRKWGYAILDEGHKIRNPDSEVSLTCKQIKTYNRVILSGTPIQNNLIELWSL 521
Query: 333 VHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSA 392
FV G LGT F++Q+ PI G + AS+ + + L +++ L+RR +
Sbjct: 522 FDFVFPGRLGTLPVFQQQFAVPINMGGYANASNVQVQTGYKCAVILRDLISPYLLRRLKS 581
Query: 393 LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKK 452
+++ LP K E V+ +K+T+ Q++LY + S+ V +KG N +G + L+K
Sbjct: 582 DVARDLPKKNEMVLFVKLTEYQQQLYEKFLDSEDVSAILKGKRNVLMG------VDILRK 635
Query: 453 LCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
+CNHPDL+ I + + Y KSG KL VL +L + K
Sbjct: 636 ICNHPDLIDRDILSHRRNY---------NYGDPRKSG--------KLQVLKNLLQLWKKE 678
Query: 513 TDDKIVLVSNYTQTLDLFERL-----------SKLRG-YKYVRLDGSMTIKKRAKVVETF 560
+ +L Q LD+ E+ + G + Y+R+DGS I R +V+TF
Sbjct: 679 G-HRTLLFCQTRQMLDILEKFVGNLKSISDEGDDIDGKFNYLRMDGSTPIAVRQSLVDTF 737
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N + +F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQKK +YR
Sbjct: 738 NNNNYYHVFLLTTKVGGLGINLTGADRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYR 797
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
++ GSIEEK+ RQ K L++ ++ + R F M++L LF L
Sbjct: 798 LMTAGSIEEKIYHRQIFKTFLTNKILK-DPKQRRFFRMNDLHDLFSL 843
>gi|448535812|ref|XP_003871023.1| Rad26 protein [Candida orthopsilosis Co 90-125]
gi|380355379|emb|CCG24897.1| Rad26 protein [Candida orthopsilosis]
Length = 1005
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/557 (31%), Positives = 291/557 (52%), Gaps = 72/557 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E + G I+ DEMGLGKT+Q I+ + L G L KP++
Sbjct: 308 LFDYQKTCVQWLWELYS-----QKTGGIIGDEMGLGKTIQIISFLAGLHYSGLLHKPVL- 361
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG---GSKAEI-DNKLNSFMQTY----- 256
+V P++++ W NE +W R L G G+ A+I + K+ +++T+
Sbjct: 362 ---VVVPATVMNQWVNEFHRWWPPLRCVILHSIGSGMGNDAKISEAKMEEYLETWDPQTS 418
Query: 257 ------------GRRPVNPI------LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
++ VN + L+ +Y R ++ + E G + DEGH+++N
Sbjct: 419 KKSLRGIKSQINAQKIVNTVVEKGHVLITTYVGLRIYSKYILPQEWGYCVLDEGHKIRNP 478
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
+S +K R++LSGTPIQN+L E +SL FV G LGT F++Q+ PI G
Sbjct: 479 DSDISLTCKQIKTVNRIILSGTPIQNNLTELWSLFDFVFPGRLGTLPVFQQQFSIPINVG 538
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ +++ + A + L +++ L+RR ++K LP K+E V+ +K+T +Q++LY
Sbjct: 539 GYANSNNLQVKTAYKCAVVLRDLISPYLLRRLKNDVAKDLPKKSEMVLFVKLTRVQQDLY 598
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
+ S+ + ++G N +G + L+K+CNHPDL+ + A+
Sbjct: 599 EKFLDSEDLNSILRGKRNVLMG------VDMLRKICNHPDLI----------YREALM-- 640
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL----- 533
+ ASY K S K+ VL +L + + K +L Q LD+ E+
Sbjct: 641 ---HKASYGDPKK----SGKMQVLKNLLQLWQ-NEGHKTLLFCQTRQMLDILEKFVSNLS 692
Query: 534 ---SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVM 590
++ + + Y+R+DGS I +R +V+ FN + +F+L++K GG G+NL GA+R+++
Sbjct: 693 LLNNESKHFTYLRMDGSTAISQRQNLVDEFNNDPSLHVFLLTTKVGGLGVNLTGADRVII 752
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
+DPDWNP+ D QA R WR GQKK +YR ++TGSIEEK+ RQ K L + ++ +
Sbjct: 753 YDPDWNPSTDIQARERAWRLGQKKDITIYRLMTTGSIEEKIYHRQIFKTFLQNKILK-DP 811
Query: 651 DVARHFSMSELRSLFQL 667
R F ++L LF L
Sbjct: 812 KQRRFFKNNDLHDLFTL 828
>gi|189239152|ref|XP_971094.2| PREDICTED: similar to Transcriptional regulator ATRX homolog
(ATP-dependent helicase XNP) (X-linked nuclear protein)
(dXNP) (d-xnp) [Tribolium castaneum]
Length = 1220
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 180/568 (31%), Positives = 300/568 (52%), Gaps = 65/568 (11%)
Query: 137 VVVDPVLSNILRPHQREGVKFM----YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
V VD L+ +L+PHQ+ G++FM YE V ++ + GCI+A MGLGKTLQ ITL+
Sbjct: 589 VTVDHKLAKMLKPHQKSGIQFMWEACYESVEILKTKPGSGCILAHCMGLGKTLQVITLIH 648
Query: 193 TLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSF 252
TL P+ K ++V P S V NW NE K I E N ++++
Sbjct: 649 TLFTH-PVTK--TKHVLVVCPLSTVINWKNEFKKAFKQLDNPPDIYPYWIIEKINIIHTW 705
Query: 253 MQTYGRRPVNPILVISYETFR---SHASVLHKNEV--------------GLVLCDEGHRL 295
QT G +L++ Y+ ++ + + L V L++CDEGH+L
Sbjct: 706 RQTGG------VLILGYDAYQIITNEKTALRITAVEKQRALEALVDPGPDLIVCDEGHQL 759
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN ++ QALM +K KRR++L+GTP+QN+L EY+ +V FV +LGT E+ ++ +PI
Sbjct: 760 KNGKTLKTQALMKVKTKRRIVLTGTPLQNNLKEYYFMVQFVKPHLLGTYLEYTNRFASPI 819
Query: 356 LRGQ--DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
+ GQ DS D + K +R L ++ + R ++LS YLP T+ + IK+T L
Sbjct: 820 MNGQFHDSTPGDIKLMK--KRTHVLTKMLKNTIHRVEGSVLSTYLPEITDYTIFIKLTPL 877
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSIT--SLKKLCNHPDLVMDKIQTGADGF 471
Q +LYT I + G+ + L T + +LK+ L+ + ++ +
Sbjct: 878 QIDLYTRYID-------LVTGQASNLSSTFFHDYSKPTLKRKAKTAGLI-ENLEGDDNNV 929
Query: 472 ENAM-----NILPTGYAASYKSGKLLIELSAKL-MVLDTMLAVIKMTTDDKIVLVSNYTQ 525
E+ N+LP + + I S K+ ++LD + M ++K+++ Y
Sbjct: 930 EHIRADWYKNLLPADVSTN-------INYSTKIKLILDIISEC--MRNNEKVLIFGQYLV 980
Query: 526 TLDLFER-LSKLRGYK----YVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
LD+ E L + R ++ Y R+DG +++ R + + FN +F+L+ K GG GL
Sbjct: 981 ELDIVEHFLKQFRNWRPNVDYYRMDGDTSVENRDILCKKFNSNPTSKVFLLTHKVGGLGL 1040
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NL GANR+++ + NP++D Q++ RV+R GQ++ C+VYR +S G++EEK+ R K +
Sbjct: 1041 NLTGANRVILIGSNHNPSHDSQSLYRVYRFGQERKCYVYRLVSLGTMEEKIYHRCVLKLS 1100
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLE 668
+S VVD + R + ++L+ +++ +
Sbjct: 1101 ISGTVVD-KLHFDRRYKTTDLKEMYKYD 1127
>gi|110289185|gb|ABB47753.2| SNF2 domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 1476
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 208/727 (28%), Positives = 350/727 (48%), Gaps = 113/727 (15%)
Query: 111 ALVLYTPPQLSAH----DLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE----CV 162
+ L P ++S + ++ + +++ + V + +S L+PHQ G++FM+E V
Sbjct: 675 GISLEAPSEVSEYVGDGHIVNLAREEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSV 734
Query: 163 TGVRIED-AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V+ D +GCI+A MGLGKT Q IT ++T++R L + A+IV P +++ NW
Sbjct: 735 KKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQLG---LRTALIVTPVNVLHNWK 791
Query: 222 NEITKWLGGRVAALPI---DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA-- 276
E KW L + + +A I L + G +L+I Y +FR+ +
Sbjct: 792 KEFIKWCPAESKPLRVYMLEDVPRANIQYLLKKWRIKGG------VLLIGYSSFRNLSLG 845
Query: 277 -SVLHK---NEV--------GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
S K NE+ +++CDE H +KN + T QAL ++ +RR+ L+G+P+QN
Sbjct: 846 RSARDKTVANEITNALQCGPDILVCDEAHIIKNRRADTTQALKQVRTQRRIALTGSPLQN 905
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER----LEQLIG 380
+L+EY+ +V FV +G LG++ EFR +++ PI GQ + ++ + N+R EQL G
Sbjct: 906 NLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILYEQLKG 965
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
V R + ++ LP K VV +K++ LQ++LY + + + E +
Sbjct: 966 FVQRMDMN----VVKNDLPEKKVFVVTVKLSQLQRKLYRRFLDVNGFSSSA-ASEKSFQR 1020
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTG--------------ADGFENAMNILPTGY---- 482
+ +L + NHP L+ Q G + +N N LP G
Sbjct: 1021 SGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVESFLMDESSSDDNIENYLPNGEKLRS 1080
Query: 483 ---AASYKSGKLLIE------------------LSAKLMVLDTMLAVIKMTTDDKIVLVS 521
S KS ++ E S K+++L +L+ DK ++ S
Sbjct: 1081 RNDQLSKKSSDVVNEESNWWENLLDENAYKEADYSGKMVLLLDILSSCS-ELGDKALVFS 1139
Query: 522 NYTQTLDLFE-RLSKL-----------RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI- 568
TLDL E LSKL +G + R+DGS +R +VE FN N +
Sbjct: 1140 QSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRIDGSTPSSERQNLVERFNDPENIRVK 1199
Query: 569 -FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
++S++AG G+NL ANR+++ D WNP +D QA+ RVWR GQ KP + YR ++ ++
Sbjct: 1200 CTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQAIYRVWRYGQTKPVYAYRLMAHATM 1259
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNG 687
EEK+ +RQ K+ L++ VVD + V+R S E+ LF+ + + + G
Sbjct: 1260 EEKIYKRQVTKEGLAARVVD-RQQVSRTISKEEMLHLFEFGDEELLEQSGSTMNGHSKVG 1318
Query: 688 IQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHC-WGAGVSFVFYQHST---KAEKSK 743
+ P P S+ T+ H+ R +V+ + H W A +++H T + E+ +
Sbjct: 1319 TEKPPTPNSSETTE------HLPLDRLMVNLLHDHSRWIAS----YHEHETLLQENEEER 1368
Query: 744 VVTEEEE 750
+ EE++
Sbjct: 1369 LTKEEQD 1375
>gi|303390601|ref|XP_003073531.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302678|gb|ADM12171.1| DNA repair and recombination protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 688
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 284/536 (52%), Gaps = 57/536 (10%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
L N L +QR+GV +M + G ++AD+MGLGKT+Q I + L
Sbjct: 138 FLWNSLFEYQRDGVAWMLGLYKREK-----GGVLADDMGLGKTIQMIVFLAVLFHNKS-- 190
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
I+KA+I+ P+++V W E W + F++ + P
Sbjct: 191 ---IEKALILCPATIVSQWMAE---W-------------------KRFYPFVRVFFGFPA 225
Query: 262 NP---ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
+ ++SYE F++ A L + + L DEGH++KN +Q ++ ++++ R +LS
Sbjct: 226 EDCRGVYLMSYEKFKARAKDLLWDTLVL---DEGHKIKNRNAQITLSVKKVRSRSRFVLS 282
Query: 319 GTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
GTPIQN+L E +S+ FVN G+LG+ F +++E I RG AS+ + KA L
Sbjct: 283 GTPIQNNLGELWSMFDFVNPGLLGSHTSFHEEFEEIIRRGGYKSASNLQVEKAYRHSLML 342
Query: 379 IGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTK 438
++ ++RRT + +S LP K ++++ +T +Q ELY +++S + + + G N
Sbjct: 343 RSLIEPYILRRTKSQISHKLPSKEDKIIFCTLTPIQIELYNRILESKHIMKVLIGKANL- 401
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTG-------ADGFENAMNILPTGYAASYKSGKL 491
LS I+ L+K+CNHP L + + + G A G +N L G +S
Sbjct: 402 -----LSGISMLRKVCNHPRLFIPRKEDGSEDLSEEASGEKNNEETL--GLLKKEESQYG 454
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
L+ S K+ +L +L K + +K+++ S + LD+ E+ + Y Y+R+DG +
Sbjct: 455 LVSSSCKIKILMDLLKKWK-SEGNKVLVFSQTIRMLDIIEKC--VEKYAYLRMDGRTSTS 511
Query: 552 KRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R+ +V+ FNK + F+F+L++K GG GLNL GA+R+V++DPDWNP+ D QA R WR G
Sbjct: 512 SRSSLVDRFNKDDSIFMFLLTTKVGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYG 571
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
Q+K +YRF+ +IEEK+ Q+Q K L V+ ++R F+ S + LF
Sbjct: 572 QRKGVEIYRFICKDTIEEKVYQKQIFKDLLGKKVL-SNPGLSRFFNKSCINELFSF 626
>gi|302814766|ref|XP_002989066.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
gi|300143167|gb|EFJ09860.1| hypothetical protein SELMODRAFT_450679 [Selaginella moellendorffii]
Length = 1043
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 177/570 (31%), Positives = 283/570 (49%), Gaps = 62/570 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + L + P +I
Sbjct: 299 YQKTGVKWLWELHSL-----KTGGIIGDEMGLGKTVQVIAFL-AALHHSRMYSP----SI 348
Query: 210 IVAPSSLVKNWCNEITKWL---------------GGRVAALPIDGGSKAEIDNKLNSFMQ 254
+V P +L W E+ KW G + A D D K ++ +
Sbjct: 349 VVCPVTLTFQWKREVEKWYPKFDVQVVHESAAPKGKKKEAEDSDASGDDSGDAKRDARLA 408
Query: 255 TYGR------RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
+ R + ++V +YE R L + G + DEGHR++N +++T
Sbjct: 409 RWDGVVEKTVRSPSGLIVTTYEQLRLLKDTLLDIDWGYAVLDEGHRIRNPDAETTLICKQ 468
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L+ R++++G PIQN L E +SL FV G LG F+ Q+ PI G + A+ +
Sbjct: 469 LQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFQAQFALPISIGGYANATSLQV 528
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
+ A + L ++ ++RR + + L KTE V+ +T+ Q+ Y + S V
Sbjct: 529 STAYKCAVTLRDLIMPYILRRMKSDVEAKLTKKTEHVLFCSLTETQRACYRAFLASSDVE 588
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
R +G +N AL I L+K+CNHPDL+ E + Y +S
Sbjct: 589 RIFEGSKN------ALYGIDILRKICNHPDLL-----------EREASEKHADYGLPDRS 631
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
GKL MV+ +L K ++++ Q LD+ E + +GY Y R+DGS
Sbjct: 632 GKL--------MVVSQVLNSWK-DQGHRVLVFCQTQQMLDIVEIFVESQGYTYRRMDGST 682
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
++K+R +++ FN++S+ F+F+L++K GG G NL GANR+++FDPDWNP+ D QA R W
Sbjct: 683 SVKQRPALIDEFNESSHVFVFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 742
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
R GQ K VYR ++ G+IEEK+ RQ +K+ L++ ++ + R F ++R LF L
Sbjct: 743 RIGQTKDVIVYRLITRGTIEEKVYHRQIYKQFLTNKILR-DPQQRRVFKSKDMRDLFVLH 801
Query: 669 ENTISDTHDKIKCSRCVNGIQVKPPPLESD 698
E+ DK + S +++ P ESD
Sbjct: 802 EDA---EGDKTETSNLFPELKL-PAAAESD 827
>gi|254568884|ref|XP_002491552.1| Protein involved in transcription-coupled repair nucleotide
excision repair of UV-induced DNA lesion [Komagataella
pastoris GS115]
gi|238031349|emb|CAY69272.1| Protein involved in transcription-coupled repair nucleotide
excision repair of UV-induced DNA lesion [Komagataella
pastoris GS115]
gi|328351939|emb|CCA38338.1| DNA excision repair protein ERCC-6 [Komagataella pastoris CBS 7435]
Length = 1088
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 181/563 (32%), Positives = 288/563 (51%), Gaps = 77/563 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 304 LFDYQKTCVQWLWELYL-----QKVGGILGDEMGLGKTVQIISFIAGLHYTKKLNKPVI- 357
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG----GSKAEIDNK--LNSFMQT--YG 257
+V P+++++ WCNE +W RV L G GS+ + N+ + ++ YG
Sbjct: 358 ---VVCPATVLRQWCNEFHRWWPPLRVVILHAIGTGLSGSRTSLQNEASIEKLLEEEEYG 414
Query: 258 RRPV--------------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+++ +Y R ++ L K + G + DEGH+++N
Sbjct: 415 STKSLASLKAESRVKELIDSVFTRGHVIITTYVGLRIYSKHLLKRDWGYAILDEGHKIRN 474
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
S L+ RV+LSGTPIQN+L E +SL F+ G LGT F+ Q+ PI
Sbjct: 475 PNSDISLTCKQLRTPNRVILSGTPIQNNLTELWSLFDFIFPGRLGTLPVFQNQFAIPINV 534
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + A++ + + L +++ L+RR A ++K LP K+E V+ K+T Q L
Sbjct: 535 GGYANATNLQVQVGYKCAVTLKDLISPYLLRRVKADVAKDLPKKSEMVLFCKLTAPQHAL 594
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV--MDKIQTGADGFENAM 475
Y ++SD + R ++G G I L+K+CNHPDLV K ++ D
Sbjct: 595 YEKFLRSDELSRILQGKRQVLYG------IDILRKICNHPDLVDVHAKRRSKKD------ 642
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LS 534
PT Y ++ KSGK+ V+ +L + K + K +L + Q LD+ E L
Sbjct: 643 ---PT-YGSASKSGKM--------QVVKKLLELWK-SQGHKTLLFTQTRQMLDILESFLE 689
Query: 535 KLRG----------YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
+L +K++R+DG+ +I R +V+ FN + +F+L+++ GG G+NL G
Sbjct: 690 RLNAKGAEEEDFVPFKFLRMDGTTSIGVRQSLVDVFNNDPSYNVFLLTTRVGGLGVNLTG 749
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
ANR++++DPDWNP+ D QA R WR GQKK +YR + GSIEEK+ RQ K+ L++
Sbjct: 750 ANRVIIYDPDWNPSTDVQARERAWRLGQKKDVTIYRLMIAGSIEEKIYHRQIFKQFLTNK 809
Query: 645 VVDCEEDVARHFSMSELRSLFQL 667
++ + R F M+EL+ LF L
Sbjct: 810 ILK-DPKQRRFFKMNELQDLFTL 831
>gi|354493473|ref|XP_003508866.1| PREDICTED: DNA excision repair protein ERCC-6 [Cricetulus griseus]
gi|344257931|gb|EGW14035.1| DNA excision repair protein ERCC-6-like [Cricetulus griseus]
Length = 1249
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 173/556 (31%), Positives = 285/556 (51%), Gaps = 64/556 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G L+++ +
Sbjct: 103 HQKEGIAFLYSLYKDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDASLVNRVL 153
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P+SL+ W E KW G RV G SK E L Q G +++ +
Sbjct: 154 LIMPTSLINTWVKEFAKWTPGMRVKTF--HGSSKDERTRNLTRIQQRNG------VIITT 205
Query: 269 YE----TFRSHASVLHKNEV-GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
Y+ ++ AS + V V+ DE H++K+ +++ + A R+LL+GTPIQ
Sbjct: 206 YQMLINNWQQLASFNGQEFVWDYVILDEAHKIKSASTKSAICARAVPASHRLLLTGTPIQ 265
Query: 324 NDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
N+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ + E L+ I+
Sbjct: 266 NNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGLKISENLMEII 325
Query: 383 NRCLIRRT-------------SALLSKYLPV-----------KTEQVVCIKMTDLQKELY 418
+RRT + L K L V K + +V I++ LQ+E+Y
Sbjct: 326 KPYFLRRTKEEVQTKKADNPEAGLSEKNLGVEAICEMPSLTRKNDFIVWIRLVPLQEEIY 385
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI----QTGADGF--- 471
+ D ++ + + L+ + LKKLC+HP L+ ++ G F
Sbjct: 386 RKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARVCHLLNLGTATFSVQ 439
Query: 472 -ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
EN + P + + + L++ S K++ L +L ++ +V S Q L++
Sbjct: 440 DENEQEVAPDVDSIHHLTDNALMQESGKMIFLVALLERLQDEGHQTLVF-SQSRQILNII 498
Query: 531 ERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
ERL + R +K +R+DG++T + +R K ++ F + +F+L+++ GG GL L A R+V
Sbjct: 499 ERLLRNRHFKTLRIDGTITHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTAATRVV 558
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L +
Sbjct: 559 IFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEK 618
Query: 650 EDVARHFSMSELRSLF 665
++ R+FS ELR LF
Sbjct: 619 KNPFRYFSKQELRELF 634
>gi|156841074|ref|XP_001643913.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114542|gb|EDO16055.1| hypothetical protein Kpol_1067p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 1053
Score = 263 bits (672), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/566 (31%), Positives = 282/566 (49%), Gaps = 78/566 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+ ++L +Q+ V+++YE + G I+ DEMGLGKT+Q I + +L G L
Sbjct: 273 IYSLLFNYQKTCVQWLYELN-----QQKCGGIIGDEMGLGKTIQIIAYLASLHHSGLLDG 327
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKW-------------------------------LGGR 231
P++ IV P++++K WCNE+ W +
Sbjct: 328 PIL----IVCPATVMKQWCNELHHWWPPLRTVILHAMGAGMSAKKKISEEELENLIMTSN 383
Query: 232 VAALPIDG-GSKAEIDNKLNSF--MQTYGRRPVNP--ILVISYETFRSHASVLHKNEVGL 286
A D S +++ ++L S +Q + VN +++ +Y R H+ L K
Sbjct: 384 AADFSYDEFTSSSKVKSQLESSRSIQELIDKVVNDGHVIITTYVGLRLHSDKLLKVNWSY 443
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
+ DEGH+++N +S+ L+ + R++LSGTPIQN+L E +SL F+ G LGT
Sbjct: 444 AVLDEGHKIRNPDSEISLTCKKLRTRNRIILSGTPIQNNLNELWSLFDFIFPGKLGTLPV 503
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F++Q+ PI G + A++ + + L +V+ L+RR A ++K LP K E V+
Sbjct: 504 FQQQFVMPINMGGYANATNIQVQTGYKCAVALRDLVSPYLLRRIKADVAKDLPDKREMVL 563
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
K+T Q+ Y + S + + G G I L+K+CNHPDL+
Sbjct: 564 FCKLTQFQRNKYIEFLNSKELGQIQNGKRQVLYG------IDILRKICNHPDLL------ 611
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
E L Y +SG K+ V+ +L + K K +L + Q
Sbjct: 612 -----EKENRTLNKAYGDPKRSG--------KMQVVKQLLLLWK-KEGHKTLLFTQSRQM 657
Query: 527 LDLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLN 581
LD+ E L+G+KY+R+DG+ I R +V+ FN N +F+L+++ GG G+N
Sbjct: 658 LDVLEDFISFKDEDLKGFKYLRMDGTTNISHRQSLVDKFN-NENYDVFLLTTRVGGLGVN 716
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
L GA+R+++FDPDWNP+ D QA R WR GQK+ +YR L TG+IEEK+ RQ K+ L
Sbjct: 717 LTGADRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLLITGTIEEKIYHRQLFKQFL 776
Query: 642 SSCVVDCEEDVARHFSMSELRSLFQL 667
++ ++ + R F M+EL LF L
Sbjct: 777 TNKIL-TDPKQKRFFKMNELHDLFSL 801
>gi|256075325|ref|XP_002573970.1| excision repair helicase ercc-6-related [Schistosoma mansoni]
Length = 1323
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 174/562 (30%), Positives = 285/562 (50%), Gaps = 73/562 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL---------LRQ 197
L +QR+GVK++++ + G I+ DEMGLGKT+Q I L+ L R
Sbjct: 207 LFDYQRKGVKWLWDLH-----QKGCGGIIGDEMGLGKTIQIIALLAGLHYSNIEDRSYRL 261
Query: 198 GPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTY 256
GP +IV P++++ W +E W RVA L G K N +Q
Sbjct: 262 GP--------TLIVCPATVLNQWMSEFHSWWPPIRVAILHSTGSGYG----KPNKLIQMI 309
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
P +L+ +Y T ++ +L V+ DEGH++KN E++ A+ R++
Sbjct: 310 TNNP-GSVLLTTYSTLVTYRDMLTSRNWSYVILDEGHKIKNPEAEATLAVKHFSTPHRLI 368
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSG+PIQN+L E +SL FV G LG EF +Q+ PI +G + AS + A +
Sbjct: 369 LSGSPIQNNLRELWSLFDFVCPGRLGPLPEFMQQFSIPITQGGYAAASPLQVETAYQCAC 428
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L ++ LIRR A + LP K+EQV+ ++TD Q++LY ++S + + G N
Sbjct: 429 TLRNLLKPYLIRRLKADVQIQLPAKSEQVLFCRLTDYQQKLYREYLESQVCKDLLNGKGN 488
Query: 437 TKLGMTALSSITSLKKLCNHPDLVM----------DKIQTGADGFENA-MNILPTGYAAS 485
S+ L+ LCNHPDL ++ ++ G EN ++ + +
Sbjct: 489 I------FPSLILLRNLCNHPDLATGGPRDSCFLNEEFESDKQGIENVCLSYSWSRFGCP 542
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLVSNYTQTLDLFERLSKLRGYKYVR 543
+S K+L+ + +++K D K++L S + L L ERL +L + Y+R
Sbjct: 543 RRSSKMLV-----------VASLLKNWYDQGHKVLLFSQSRRMLTLLERLVQLMKFSYLR 591
Query: 544 LDGSMTIKKRAKVVETFN-----------KTSNE---FIFMLSSKAGGCGLNLIGANRLV 589
+DG+ + +R +++ FN +TS+ F+F+L+++ GG G+NL ANR++
Sbjct: 592 MDGTTPVSQRHELIRRFNYRSTSDSEKIDRTSDHLDIFLFLLTTRVGGLGVNLTSANRVL 651
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
++DPDWNP D QA R WR GQ + +YR L++G+IEEK+ RQ K+ L++ ++
Sbjct: 652 IYDPDWNPTTDLQARERAWRIGQSRDVVIYRLLTSGTIEEKIYHRQIFKQFLTNRILKNP 711
Query: 650 EDVARHFSMSELRSLFQLEENT 671
R F ++L+ L E+ +
Sbjct: 712 RQ-QRFFKTNDLQELLTFEDES 732
>gi|321253974|ref|XP_003192917.1| DNA repair protein [Cryptococcus gattii WM276]
gi|317459386|gb|ADV21130.1| DNA repair protein, putative [Cryptococcus gattii WM276]
Length = 993
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 223/380 (58%), Gaps = 24/380 (6%)
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSGTP+QNDL EY+++V F G+LG F K YE PIL+ + S + ER
Sbjct: 426 VLSGTPVQNDLGEYWAMVDFACPGVLGKYSAFAKHYEKPILKSRTPNCSTKDVELGRERA 485
Query: 376 EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGE 435
L + ++RRT+A+L YLP K E V+ + + LQ + +NL+ V ++G
Sbjct: 486 NDLAKLSKEFVLRRTAAVLEHYLPPKYEYVIFVAPSLLQLRVLSNLLDPSIVGSFIRGH- 544
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVM---DKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G +L+ I ++K+ N P L+ D++ D +A T A S G
Sbjct: 545 ----GAQSLALIDLMRKISNSPMLLKRKDDELARADDDLGSA-----TSAAISAIPGDTN 595
Query: 493 IE---LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
I S K+++LD ML I +T++K+V+VSN+T TLDL + L KL+ Y Y+RLDGS
Sbjct: 596 INDVTTSGKMLLLDKMLHSIYQSTEEKVVVVSNWTSTLDLIQGLCKLKRYNYLRLDGSTP 655
Query: 550 IKKRAKVVETFNKT---SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
K+R ++V+ FNK F+F+LS+KAGG GLNLIG +RL++FD DWNP+ D QAMAR
Sbjct: 656 PKQRQELVDRFNKDKERQGSFVFLLSAKAGGVGLNLIGGSRLILFDSDWNPSTDLQAMAR 715
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD---CEEDVAR-HFSMSELR 662
+ RDGQK+P ++YR L+T +I+EK+ QRQ K LS ++D E+ + FS +ELR
Sbjct: 716 IHRDGQKRPVYIYRLLTTNAIDEKIYQRQITKTGLSDQMMDHKHSEKQTGKDSFSAAELR 775
Query: 663 SLFQLEENTIS-DTHDKIKC 681
+F L T THD + C
Sbjct: 776 DIFTLNVRTDGCQTHDLLGC 795
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/247 (38%), Positives = 128/247 (51%), Gaps = 31/247 (12%)
Query: 21 KTFPPPVKKEKRSCTSRKPLGSVDNE--DEPNSKLP-------MTKEEMSEHENLIRQIL 71
K F PP++KEK + T + +V++E P S LP + + +
Sbjct: 209 KAFRPPIQKEKFTSTKLSTIEAVEDEHRQSPISSLPKRSIPTPAAAQRAVAASSFYTKQS 268
Query: 72 AKPFKVPILNYTGGGYSTKALGVRREGAR----KALHDPTAPNALVLYTPPQLSAHDLLK 127
+KP+ I+ LG + R AL +P A A+V+ P A L K
Sbjct: 269 SKPYSERIV-----------LGEKSNKERLEWGGALFNPHAEGAVVMPRP----AEKLAK 313
Query: 128 IDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
+ I V VV+DP+L N+LR HQ+EGVKFMY CV G+ + GCI+ADEMGLGKTLQ
Sbjct: 314 LKGTTI-VDVVIDPILGNLLREHQKEGVKFMYSCVMGMTGAEGEGCILADEMGLGKTLQT 372
Query: 188 ITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEI 245
I L++T+L+Q P A +I KAIIV P +LV NW E KW+ RV L D S +
Sbjct: 373 IALIYTMLKQSPFANQTSIIGKAIIVCPVTLVNNWRKEFKKWVDRRVNVLVADVLSGTPV 432
Query: 246 DNKLNSF 252
N L +
Sbjct: 433 QNDLGEY 439
>gi|261335950|emb|CBH09283.1| putative DNA excision repair protein ERCC-6 [Heliconius melpomene]
Length = 944
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 284/530 (53%), Gaps = 36/530 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GVK+++E + G ++ DEMGLGKT+Q I + L + + +
Sbjct: 171 LYTYQKVGVKWVWELH-----QVQSGGLLGDEMGLGKTVQIIAFLAGLSKSDSGSWGGLG 225
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
II+AP++++ W + W RVA L G + ++G IL
Sbjct: 226 PTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSGSHGGNHQKLIKELHSSHG------IL 279
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
+I+Y + L + V+ DEGH+++N ++Q + + ++L++G+P+QN
Sbjct: 280 LITYNGIVKYIKDLLTKKWHYVILDEGHKIRNPDTQVSKLVKKFDTPHKILITGSPMQNS 339
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E +SL F+ G+LGT F + TPI +G + A+ + A E + L I+
Sbjct: 340 LQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANATQHQEATALEIAKALKNIITPY 399
Query: 386 LIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG--- 440
++RRT A + ++ LP K EQV+ +T Q++LY + VR + +++K G
Sbjct: 400 ILRRTKAEVQEHIKLPEKNEQVLFCALTREQRDLYMGYLMGSTVRSIL--DKDSKFGDPI 457
Query: 441 -MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
L ++T+L+K+CNHPDL + +E A + S+ + K S K+
Sbjct: 458 RARVLVALTTLRKICNHPDLYL---------YE-AHDDDEDIDEESFGNWKR----SGKM 503
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
V+ ++L I + + ++ S L + E+ + ++Y+++DGS+++ +R +++T
Sbjct: 504 SVVHSLLK-IWLKQGHRTLIFSQSRAMLCILEQHLQKHKFEYLKMDGSVSVAQRQNLIKT 562
Query: 560 FNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
FN+ + +F+ +++ GG G+NL GA+R++++DPDWNPA D+QA R WR GQ++ VY
Sbjct: 563 FNENAKYLVFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWRIGQQRNVTVY 622
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
R LS G+IEEK+ QRQ K LS+ ++ + + + S L++LF LE+
Sbjct: 623 RLLSAGTIEEKIYQRQIFKNFLSNKIL-VDPNQKNVLTTSNLQTLFNLED 671
>gi|431901320|gb|ELK08347.1| DNA excision repair protein ERCC-6 [Pteropus alecto]
Length = 1491
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 275/534 (51%), Gaps = 45/534 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-----------LRQG 198
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L RQ
Sbjct: 505 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQV 559
Query: 199 PLAKPL--IDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQT 255
L + + IIV P++++ W E W RVA L G + + + +
Sbjct: 560 LLCRLFDGLGPTIIVCPTTVMHQWVKEFHMWWPPFRVAILHESGSCTRKKEKLIRDIARC 619
Query: 256 YGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+G IL+ SY R + ++ V+ DEGH+++N + A + R+
Sbjct: 620 HG------ILITSYSYIRLMQDDISSHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRI 673
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
+LSG+P+QN+L E +SL F+ G LGT F +Q+ PI G S AS + A +
Sbjct: 674 ILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCA 733
Query: 376 EQLIGIVNRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
L +N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V R + G
Sbjct: 734 CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYRILNG 793
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
M S + +L+K+CNHPDL G + +P + G
Sbjct: 794 E------MQIFSGLIALRKICNHPDLF--------SGGPKNLKGIPDDELGEDQFG--YW 837
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S K++V++++L I +++L S Q L + E + + Y Y+++DG+ TI R
Sbjct: 838 KRSGKMIVVESLLK-IWHKQGQRVLLFSQSRQMLGILEIFLRAQNYSYLKMDGTTTIASR 896
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ +N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK
Sbjct: 897 QPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQK 956
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K VYR L+ G+IEEK+ RQ K+ L + V+ + R F ++L LF L
Sbjct: 957 KQVTVYRLLTAGTIEEKIYHRQIFKQFLINRVLK-DPKQRRFFKSNDLYELFTL 1009
>gi|430814726|emb|CCJ28090.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 876
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 284/549 (51%), Gaps = 61/549 (11%)
Query: 153 EGVKFMYEC-VTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIV 211
+G+++++E GV G I+ADEMGLGKT+Q + + L L+ P++ IV
Sbjct: 226 DGIQWLWELHCQGV------GGIIADEMGLGKTIQIVGFLGGLHYSQKLSGPIL----IV 275
Query: 212 APSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEI----------DNKLNSFMQTYGRR- 259
P+++++ W E KW RV L G + +I D+K ++ +
Sbjct: 276 CPATIMRQWVAEFHKWWPPFRVVILHTTGSALIDIKHEELEKQFEDDKFLKNTVSFKSKV 335
Query: 260 ------------PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
+ L+I+Y R + L N+ + DEGH+++N +S
Sbjct: 336 IKNIKKIIEKVKTLGHALIITYSGLRVYREYLFPNKWAYCILDEGHKIRNPDSDVSFICK 395
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
+K R++LSGTPIQN+L E +SL F+ G LGT F+ Q+ PI G + A++ +
Sbjct: 396 QIKTPHRIILSGTPIQNNLEELWSLFDFIFPGHLGTLPIFQSQFAIPINIGGYANATNIQ 455
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
A + L +++ L+RR A ++ LP K+EQV+ K+T+ QKE Y + + S +
Sbjct: 456 VQTAYKCACVLRDLISPYLLRRMKADMAVDLPSKSEQVLFCKLTEFQKEAYRSFLNSKDM 515
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYK 487
++G + G I L+K+CNHPDL+ + + E Y K
Sbjct: 516 DLILEGKKQILYG------IDILRKICNHPDLIYRETFLKNNDIE---------YGDPRK 560
Query: 488 SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDG 546
SGK+L V+ +L + K + +L + Q LD+ E+ + K+ + Y R+DG
Sbjct: 561 SGKML--------VIKEILKLWK-KQGHRTLLFAQTKQMLDILEKFIKKMDQFSYCRMDG 611
Query: 547 SMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMAR 606
+I R +V+ FN +++ IF+L++K GG G+NL GANR+++FDPDWNP+ D QA R
Sbjct: 612 GTSISSRQSLVDKFNNSNDIDIFLLTTKVGGLGINLTGANRVIIFDPDWNPSTDLQARER 671
Query: 607 VWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQ 666
WR GQKK +YR +++G+IEEK+ RQ K+ L++ ++ + R F ++L LF
Sbjct: 672 AWRLGQKKDVIIYRLMTSGTIEEKIYHRQIFKQFLTNKILK-DPKQRRFFKATDLYDLFS 730
Query: 667 LEENTISDT 675
L+ + T
Sbjct: 731 LKSDDTDGT 739
>gi|448113515|ref|XP_004202370.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
gi|359465359|emb|CCE89064.1| Piso0_001862 [Millerozyma farinosa CBS 7064]
Length = 1117
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 176/562 (31%), Positives = 279/562 (49%), Gaps = 75/562 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ V++++E T G I+ DEMGLGKT+Q I+ + L +K L D
Sbjct: 317 LFDYQKTCVQWLWELYT-----QKTGGIIGDEMGLGKTIQIISFIAGL----HYSKLLED 367
Query: 207 KAIIVAPSSLVKNWCNEITKWL------------GGRVAAL-----------------PI 237
+IV P++++ W NE +W G AL +
Sbjct: 368 PVLIVVPATVLNQWVNEFHRWWPPLRCVILHSIGSGMNKALVSKEEKMEELLENADPFAV 427
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+ S +N+L + IL+ +Y R ++ + + G + DEGH+++N
Sbjct: 428 NKSSLKSYENELKAKEIVDSVFQKGHILITTYVGLRIYSKYILPRKWGYAILDEGHKIRN 487
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+S +K RV+LSGTPIQN+L+E +SL FV G LGT F++Q+ PI
Sbjct: 488 PDSDVSLTCKQIKTYNRVILSGTPIQNNLIELWSLFDFVFPGRLGTLPVFQQQFAVPINM 547
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS+ + + L +++ L+RR + +++ LP K E V+ +K+T+ Q++L
Sbjct: 548 GGYANASNVQVQTGYKCAVILRDLISPYLLRRLKSDVARDLPKKNEMVLFVKLTEYQQQL 607
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y I S+ V +KG N +G + L+K+CNHPDL+ I + +
Sbjct: 608 YEKFIDSEDVSAILKGKRNVLMG------VDILRKICNHPDLIDRDILSHRRNY------ 655
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL---- 533
Y KSGKL VL +L + K + +L Q LD+ E+
Sbjct: 656 ---NYGDPRKSGKL--------QVLKNLLQLWKKEGH-RTLLFCQTRQMLDILEKFVGNL 703
Query: 534 -------SKLRG-YKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGA 585
+ G + Y+R+DGS I R +V+TFN + +F+L++K GG G+NL GA
Sbjct: 704 KSINDEGDDIDGKFNYLRMDGSTPIAVRQSLVDTFNNNNYCHVFLLTTKVGGLGINLTGA 763
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
+R++++DPDWNP+ D QA R WR GQKK +YR ++ GSIEEK+ RQ K L++ +
Sbjct: 764 DRVIIYDPDWNPSTDIQARERAWRLGQKKDITIYRLMTAGSIEEKIYHRQIFKTFLTNKI 823
Query: 646 VDCEEDVARHFSMSELRSLFQL 667
+ + R F M++L LF L
Sbjct: 824 LK-DPKQRRFFRMNDLHDLFSL 844
>gi|74007793|ref|XP_549075.2| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Canis lupus
familiaris]
Length = 1268
Score = 262 bits (670), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 286/567 (50%), Gaps = 64/567 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 114 LHNQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 164
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L+ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 165 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKTF--HGSSKDERTRNLNRIQQRNG---- 218
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K +++ + A+ R+L
Sbjct: 219 --VIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRIL 276
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ +
Sbjct: 277 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKIEYENPIMRAREKDATPGEKALGLKIS 336
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 337 ENLMAIIKSHFLRRTKEEVQKKSSTPEEIRFSEKNPDGDAICKMPSLSRKNDLIIWIRLR 396
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 397 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARARHLLSLG 450
Query: 468 ADGF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
+ F EN + + L+E S K++ L +L ++ +V S
Sbjct: 451 SVKFSVQGENEGEDASDVDHIDHVTDDTLMEESGKMIFLIELLRRLRDEGHQTLVF-SQS 509
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL L
Sbjct: 510 RQILNIIERLLKNRHFKILRVDGTVTHLVEREKRIHLFQQNKDYSVFLLTTQVGGVGLTL 569
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 570 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENIVVYRLITCGTVEEKIYRRQVFKDSLI 629
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEE 669
+++ R+F+ ELR LF +E+
Sbjct: 630 RQTTGDKKNPFRYFTKQELRELFTIED 656
>gi|301614708|ref|XP_002936822.1| PREDICTED: DNA excision repair protein ERCC-6-like [Xenopus
(Silurana) tropicalis]
Length = 1361
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 296/569 (52%), Gaps = 64/569 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 103 LYNKLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTIQVIGFL-----SGMFDS 153
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
LI ++V P++L+ NW E KW G RVA G SK E L + G
Sbjct: 154 ELIKYVLLVMPTTLISNWVKEFQKWTPGLRVAEF--HGTSKKERTRNLEKIQRMSG---- 207
Query: 262 NPILVISYETFRSHASVL-----HKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
I++ +Y+ ++ L + E ++ DE H++K ++T ++ + AK R+L
Sbjct: 208 --IIITTYQMLINNWQQLATYNGREFEWDYIILDEAHKIKTSSTKTAKSCHSIPAKNRIL 265
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E ++L F QG +LGT++ F+ +YE PI R ++ A+ E+ +
Sbjct: 266 LTGTPIQNNLREMWALYDFACQGTLLGTSKTFKMEYENPITRAREKDATPGEKALGLKIS 325
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------YLPVKTEQVVCIKMTDLQKEL 417
E L+ I+ +RRT + + L K + +V + ++ +Q+++
Sbjct: 326 ENLMKIIQPYFLRRTKSDVQNKKTERTRAQDTSQGPSMPSLTRKNDFIVWVYLSTIQEDV 385
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTA---LSSITSLKKLCNHPDLVMDK--IQTGADG-- 470
Y I D ++ +L MT L+ + LKKLC+HP L+ + IQ G +G
Sbjct: 386 YRKFISLDQIK---------ELLMTTRSPLAELNILKKLCDHPRLLSARACIQLGLEGDD 436
Query: 471 ---FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
E + L T + + S ++LIE S KL++L L + ++ S + L
Sbjct: 437 YHSNEEGDHELVTKF--DHLSDEILIEESGKLLLL-IDLLHKLKEEGHRTLVFSQSRKML 493
Query: 528 DLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANR 587
D+ +R+ + + +K +R+DG++ + +R K + F +N + +L+++ GG GL L A+R
Sbjct: 494 DMIDRILQNKNFKVMRIDGTVALPEREKRISIFQSNNNYSVLLLTTQVGGVGLTLTAADR 553
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
+V+FDP WNPA D QA+ R +R GQ++ +YR ++ G++EEK+ +RQ K++L
Sbjct: 554 VVIFDPSWNPATDAQAVDRAYRIGQQENVVIYRLITCGTVEEKIYRRQIFKESLIRQTTG 613
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTH 676
+++ R+FS EL+ LF LE+ S T
Sbjct: 614 DKKNPFRYFSKQELKELFSLEDTRTSSTQ 642
>gi|403417670|emb|CCM04370.1| predicted protein [Fibroporia radiculosa]
Length = 544
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 149/390 (38%), Positives = 221/390 (56%), Gaps = 27/390 (6%)
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
L+ RR++LSGTPIQNDL E+ ++ F N G+L FRK YETPIL+ + +S E
Sbjct: 4 ALRTPRRIILSGTPIQNDLGEFHAMADFCNPGLLDDYNIFRKVYETPILKSRAPGSSAKE 63
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
R QL I ++RR + +L KYLP K E VV + T +Q ++ ++ +D +
Sbjct: 64 TELGEARSAQLSAIARSFVLRRDATILKKYLPPKHEYVVFVTPTKVQLSIFNKILTADRL 123
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLV---MDKIQTGAD---------GFENAM 475
++ L + I L K+ N P L+ +D+ + AD E A+
Sbjct: 124 DNLVRNSTAESLAL-----INMLTKISNSPILLKATLDQAKNRADQGGDVIKKNAIEEAL 178
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
+LP ++ + LS KL L +L + TD+K ++VS+YT TL+L E K
Sbjct: 179 KLLPE------RARVDDVTLSGKLTALAHLLRALHKHTDEKCIIVSHYTSTLNLVEAFCK 232
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNKT--SNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
+ Y Y RLDG KR + V FNK+ + FIF+LSSKAGG GLNLIGA+RL + D
Sbjct: 233 KQAYTYHRLDGQTPAPKRQEYVNEFNKSNQAKRFIFLLSSKAGGVGLNLIGASRLCLIDS 292
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNP++D Q+MAR+ RDGQK+P F+YRFL+ G+I+EK+ QRQ K LS+ ++ +
Sbjct: 293 DWNPSHDLQSMARIHRDGQKRPVFIYRFLTAGTIDEKIYQRQVTKLGLSNSLMGDGPSAS 352
Query: 654 R--HFSMSELRSLFQLEENTISDTHDKIKC 681
+ F+ +L+ +F + +T THD ++C
Sbjct: 353 KSDSFTRKDLQDIFTIHPHTACHTHDLLEC 382
>gi|443429408|gb|AGC92693.1| DNA excision repair protein ERCC-6-like protein [Heliconius erato]
Length = 947
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 284/530 (53%), Gaps = 36/530 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L +Q+ GVK+++E + G ++ DEMGLGKT+Q I + L + + +
Sbjct: 176 LYTYQKVGVKWLWELH-----QVQSGGLLGDEMGLGKTVQIIAFLAGLSKSDSGSWGGLG 230
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
II+AP++++ W + W RVA L G + ++G IL
Sbjct: 231 PTIILAPATVIYQWVSHFHYWCPNLRVAVLHHSGSHGGNHQKLIRELHSSHG------IL 284
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
+I+Y + L + V+ DEGH+++N ++Q + + ++L++G+P+QN
Sbjct: 285 LITYNGIVKYIKDLLTKKWHYVILDEGHKIRNPDTQVSKLVKKFDTPHKILITGSPMQNS 344
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E +SL F+ G+LGT F + TPI +G + A+ + A E + L I+
Sbjct: 345 LQELWSLFDFMRPGLLGTYNAFMDHFATPITQGGYANATQHQEATALEIAKALKNIITPY 404
Query: 386 LIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG--- 440
++RRT A + ++ LP K EQV+ +T Q++LY + S VR + ++ K G
Sbjct: 405 ILRRTKAEVQEHIKLPEKNEQVLFCALTREQRDLYMGYLMSSTVRSIL--DKDFKFGDPF 462
Query: 441 -MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
L ++T+L+K+CNHPDL + +E A + S+ + K S K+
Sbjct: 463 RARVLVALTTLRKICNHPDLYL---------YE-AHDDDEEIDEESFGNWKR----SGKM 508
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
V+ ++L I + + ++ S L + E+ + ++Y+++DG++++ +R +++T
Sbjct: 509 SVVHSLLK-IWLKQGHRTLIFSQSRAMLCILEQHLQKHKFEYLKMDGTVSVAQRQNLIKT 567
Query: 560 FNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
FN+ + +F+ +++ GG G+NL GA+R++++DPDWNPA D+QA R WR GQ++ VY
Sbjct: 568 FNENAKYLVFLATTRVGGLGVNLTGADRVIIYDPDWNPATDNQAKERAWRIGQQRNVTVY 627
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
R LS G+IEEK+ QRQ K LS+ ++ + + + S L++LF LE+
Sbjct: 628 RLLSAGTIEEKIYQRQIFKNFLSNKIL-VDPNQKNVLTTSNLQTLFNLED 676
>gi|302824854|ref|XP_002994066.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
gi|300138072|gb|EFJ04853.1| hypothetical protein SELMODRAFT_236903 [Selaginella moellendorffii]
Length = 1046
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 283/571 (49%), Gaps = 62/571 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GVK+++E + G I+ DEMGLGKT+Q I + L + P +I
Sbjct: 302 YQKTGVKWLWELHSL-----KTGGIIGDEMGLGKTVQVIAFL-AALHHSRMYSP----SI 351
Query: 210 IVAPSSLVKNWCNEITKWL---------------GGRVAALPIDGGSKAEIDNKLNSFMQ 254
+V P +L W E+ KW G + A D D + ++ +
Sbjct: 352 VVCPVTLTFQWKREVEKWYPKFDVQVVHESAAPKGKKKEAEDSDASGDDSGDARRDARLA 411
Query: 255 TYGR------RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
+ R + ++V +YE R L + G + DEGHR++N +++T
Sbjct: 412 RWDGVVEKTVRSPSGLIVTTYEQLRLLKDTLLDIDWGYAVLDEGHRIRNPDAETTLICKQ 471
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L+ R++++G PIQN L E +SL FV G LG F+ Q+ PI G + A+ +
Sbjct: 472 LQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFQAQFALPISIGGYANATSLQV 531
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
+ A + L ++ ++RR + + L KTE V+ +T+ Q+ Y + S V
Sbjct: 532 STAYKCAVTLRDLIMPYILRRMKSDVEAKLTKKTEHVLFCSLTETQRACYRAFLASSDVE 591
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
R +G +N AL I L+K+CNHPDL+ E + Y +S
Sbjct: 592 RIFEGSKN------ALYGIDILRKICNHPDLL-----------EREASEKHADYGLPDRS 634
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM 548
GKL MV+ +L K ++++ Q LD+ E + +GY Y R+DGS
Sbjct: 635 GKL--------MVVSQVLNSWK-DQGHRVLVFCQTQQMLDIVEIFVESQGYTYRRMDGST 685
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
++K+R +++ FN++S+ F+F+L++K GG G NL GANR+++FDPDWNP+ D QA R W
Sbjct: 686 SVKQRPALIDEFNESSHVFVFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQARERAW 745
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLE 668
R GQ K VYR ++ G+IEEK+ RQ +K+ L++ ++ + R F ++R LF L
Sbjct: 746 RIGQTKDVIVYRLITRGTIEEKVYHRQIYKQFLTNKILRDPQQ-RRVFKSKDMRDLFVLH 804
Query: 669 ENTISDTHDKIKCSRCVNGIQVKPPPLESDC 699
E+ DK + S +++ P ESD
Sbjct: 805 EDA---EGDKTETSNLFPELKL-PAAAESDA 831
>gi|366988021|ref|XP_003673777.1| hypothetical protein NCAS_0A08380 [Naumovozyma castellii CBS 4309]
gi|342299640|emb|CCC67396.1| hypothetical protein NCAS_0A08380 [Naumovozyma castellii CBS 4309]
Length = 1079
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 282/565 (49%), Gaps = 82/565 (14%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L +Q+ V+++YE + G I+ DEMGLGKT+Q I + +L G L P++
Sbjct: 303 LLFNYQKTCVQWLYELY-----QQNCGGIIGDEMGLGKTIQIIAFLASLHHSGLLNGPVL 357
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGG------------------------ 240
IV P++++K WCNE+ W R L G
Sbjct: 358 ----IVCPATVMKQWCNELHHWWPPLRTIILHSTGSGMSTKKNFSEEELEQAMMNANPNE 413
Query: 241 -----------SKAEIDNKLNSFMQTYGRRPVNP--ILVISYETFRSHASVLHKNEVGLV 287
+KA +++ N +Q+ + +N I++ +Y R H+ L K
Sbjct: 414 LTCEDFQNRSKTKASLESTFN--IQSLIDKVINDGHIIITTYVGLRIHSEQLLKVNWAYA 471
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+ DEGH+++N +S +K R++LSGTPIQN+L+E +SL F+ G LGT F
Sbjct: 472 VLDEGHKIRNPDSDISLTCKKIKTPNRIILSGTPIQNNLIELWSLFDFIYPGKLGTLPVF 531
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
++Q+ PI G + A++ + + L +++ L+RR + ++K LP K E V+
Sbjct: 532 QQQFVMPINAGGYANATNIQVQTGVKCATALRNLISPYLLRRVKSDVAKDLPEKKEMVLF 591
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
K+T QK Y + S+ + + ++GG L I L+K+CNHPDL+
Sbjct: 592 CKLTQYQKNRYLEFLNSNELTQ-IRGGRR-----HVLYGIDILRKICNHPDLL------- 638
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
E T Y +SGK M + L ++ K +L + Q L
Sbjct: 639 ----EREERQYETDYGNPKRSGK---------MQVVKQLLLLWHKEGHKTLLFTQSRQML 685
Query: 528 DLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
D+ E+ S L KY+R+DG+ I KR +V+ FN + +F+L+++ GG G+NL
Sbjct: 686 DILEQFIQFKDSDLSVLKYLRMDGTSNISKRQGLVDQFNNEDYD-VFLLTTRVGGLGVNL 744
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
GANR++++DPDWNP+ D QA R WR GQK+ +YR + +GSIEEK+ RQ K+ L+
Sbjct: 745 TGANRIIIYDPDWNPSTDMQARERAWRIGQKREVSIYRLMVSGSIEEKIYHRQIFKQFLT 804
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+ ++ + R F M+ELR LF L
Sbjct: 805 NKIL-TDPKQKRFFKMNELRDLFTL 828
>gi|224098212|ref|XP_002194690.1| PREDICTED: DNA excision repair protein ERCC-6-like [Taeniopygia
guttata]
Length = 1170
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 295/574 (51%), Gaps = 62/574 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L HQREGV F+Y + E G I+AD+MGLGKT+Q I + G LI
Sbjct: 103 LFQHQREGVAFLYR----LHRERKPGGILADDMGLGKTIQVIAFL-----SGMFDAELIQ 153
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILV 266
+++ P++LV +W E +W G + G SK E L + G I++
Sbjct: 154 HVLLIMPTTLVSSWLAEFARWTPG-LRVKEFHGTSKTERTRNLERVQRKNG------IVI 206
Query: 267 ISYETFRSHASVL---HKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
SY+ ++ L H+ E ++ DE H++K ++T + + + A R+LL+GTP
Sbjct: 207 TSYQMLINNWKQLASRHEQEFVWDYIILDEAHKIKCPSNKTTKCVYAIPAHYRILLTGTP 266
Query: 322 IQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
+QN+L E +SL F QG +LGTA+ F+ +YE PI R ++ A+ E+ + E L+
Sbjct: 267 VQNNLREMWSLFDFACQGSLLGTAKTFKMEYENPITRAREKDATPGEKALGLKISENLMS 326
Query: 381 IVNRCLIRRTSALLSKY-----------------------LPVKTEQVVCIKMTDLQKEL 417
I+ +RRT + KY L K + VV + + +Q+E+
Sbjct: 327 IIKPYFLRRTKEDIKKYHADKADSPLSEDPSENKAPVMPSLTRKNDFVVWVYLAPVQEEI 386
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--IQTGADGFENAM 475
Y N + D V+ + + + L+ +T LKKLC+HP L+ + Q G + E++
Sbjct: 387 YRNFLCLDHVKEVLM------MNRSPLAELTILKKLCDHPRLLSTRACTQLGLEEEEDSE 440
Query: 476 N------ILPTG-YAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
I+ +G + S + +IE S K+ L +L ++ + ++ S + LD
Sbjct: 441 QDYRMEAIMFSGKNKIDHLSDETVIEESGKMQFLVGLLERLR-EEGHRTLVFSQSRKMLD 499
Query: 529 LFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANR 587
+ E + R ++ +R+DG++T + +R + + F + +F+L+++ GG G+ L A+R
Sbjct: 500 IIELVLSRRQFQILRIDGTVTHLTERERRINAFQTNTTYSVFLLTTQVGGVGITLTAASR 559
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
+V+FDP WNPA D QA+ R +R GQK+ +YR ++ G++EEK+ +RQ K +L
Sbjct: 560 VVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQTTG 619
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+FS ELR LF LE+ S T +++
Sbjct: 620 DKKNPFRYFSKQELRELFILEDTRTSATQIQLQS 653
>gi|348578047|ref|XP_003474795.1| PREDICTED: DNA excision repair protein ERCC-6-like [Cavia
porcellus]
Length = 1242
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 174/574 (30%), Positives = 288/574 (50%), Gaps = 79/574 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G ++AD+MGLGKT+Q I + G
Sbjct: 92 LYNQLFEHQKEGVAFLYSLYRDGR----KGGVLADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
L+ +++ P++L+ W E KW G + A G SK E L Q G
Sbjct: 143 SLVTHVLLIMPTNLISMWVKEFAKWTPG-MRAKTFHGPSKGERTRSLLRVQQKTG----- 196
Query: 263 PILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+L+ +Y+ +F A V V+ DE H++K+ +++ + A
Sbjct: 197 -VLITTYQMLINNWQQLSSFNGQAFVW-----DYVILDEAHKIKSSSTKSATYARAVPAS 250
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YETPI+RG++ A+ E+
Sbjct: 251 NRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYETPIVRGREKDATSGEKALG 310
Query: 372 NERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVC 407
+ E L+ I+ +RRT + K L K + ++
Sbjct: 311 LKMSENLMEIIKPYFLRRTKEEIQKNRLNIPEVGPTEKNLGVDTIYRMPSLSRKNDLIIW 370
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD----- 462
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+
Sbjct: 371 IRLVPLQEEIYKKFVSLDYIKELLMETH------SPLAELGVLKKLCDHPRLLSARACRL 424
Query: 463 ------KIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
KI + E++ ++ +A + L+E S K++ L ++L ++
Sbjct: 425 LHLEAIKISAQDENEEDSSDVDNLAHA----TDTTLMEESGKMLFLISLLKRLRDEGHQT 480
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKA 575
+V S Q L++ ERL K + +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 481 LVF-SQSRQILNIIERLLKNKHFKILRIDGTVTHLLEREKRISLFQQNKDYSVFLLTTQV 539
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ
Sbjct: 540 GGAGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQ 599
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
K +L +++ R+FS +LR LF +E+
Sbjct: 600 IFKDSLIRQTTGDKKNPFRYFSKQDLRELFTVED 633
>gi|453082990|gb|EMF11036.1| SNF2_N-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 1270
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 174/548 (31%), Positives = 280/548 (51%), Gaps = 56/548 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT Q I+ + L G + KP+I
Sbjct: 466 YQKTGVQWLWELYS-----QQVGGIVGDEMGLGKTCQVISFLAGLHYSGKITKPII---- 516
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS------KAEIDNKLNSFMQTYGRRPVN 262
++ P++L+K W +E +W RV L G +A ++ L+ + R N
Sbjct: 517 VLCPATLLKQWVDEFHRWWPPLRVTILHSSGSGMLDVKREARFEDDLDDDRRKKSRGRPN 576
Query: 263 P--------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
P +LV +Y ++A L + DEGH+++N ++
Sbjct: 577 PSVRNVIDRVVQDGHVLVTTYAGLVNYADQLLPVNWEYCVLDEGHKIRNPNAEITIFCKE 636
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
+ RV+LSGTP+QN+L E ++L FV LGT F+ Q+ PI +G + AS+ +
Sbjct: 637 IMTHNRVILSGTPMQNNLEELWTLFDFVFPMRLGTLVNFKNQFAIPIKQGGYANASNLQV 696
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
A + E L ++ L++R A ++ LP K E+V+ K+T LQ++ Y + S+ ++
Sbjct: 697 ETAMKCAETLKDAISPYLLQRFKADVATDLPKKIERVLFCKLTKLQRDAYQWFLDSEDMK 756
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
M G AL I L+K+CNHPDLV K + G+E Y KS
Sbjct: 757 SIMNGKRQ------ALYGIDILRKICNHPDLVEHKTLSKKAGYE---------YGIGTKS 801
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRLDGS 547
GK+ V+ +L + K K +L + + LD+ ER + + G Y R+DG+
Sbjct: 802 GKM--------QVVKELLKIWK-DKGHKTLLFAQHRIMLDILERFIGSMSGINYRRMDGT 852
Query: 548 MTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
IK R +V FN + +F+L++K GG G+NL GANR++++DPDWNP+ D QA R
Sbjct: 853 TDIKHRQDLVNEFNHDPDLHVFLLTTKVGGLGVNLTGANRIIIYDPDWNPSTDVQARERA 912
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WR GQK+ +YR ++ G+IEEK+ RQ K L++ ++ + ++F + +L LF L
Sbjct: 913 WRLGQKREVEIYRLMTAGTIEEKIYHRQLFKLFLTNKIL-RDPKQRQNFQLKDLHDLFTL 971
Query: 668 EENTISDT 675
E+ T
Sbjct: 972 GESVDGQT 979
>gi|363748402|ref|XP_003644419.1| hypothetical protein Ecym_1369 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888051|gb|AET37602.1| hypothetical protein Ecym_1369 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1037
Score = 261 bits (668), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 175/565 (30%), Positives = 276/565 (48%), Gaps = 82/565 (14%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L +Q+ V+++YE + G I+ DEMGLGKT+Q I+ + +L G L +P++
Sbjct: 271 LLFDYQKTCVQWLYELY-----QQKSGGIIGDEMGLGKTIQIISFLASLHHSGKLNRPVL 325
Query: 206 DKAIIVAPSSLVKNWCNEITKW-------------------------------LGGRVAA 234
++ P++++K WC E KW + +
Sbjct: 326 ----VICPATVLKQWCTEFHKWWPPFRTIILHSIGTGMVNKKKLTEQEIEEIIMKSKAEE 381
Query: 235 LPIDGGS-----KAEIDNKLNSFMQTYGRRPVN--PILVISYETFRSHASVLHKNEVGLV 287
D S K EI++ N +++ + +N +L+ +Y + HA L K + G V
Sbjct: 382 FSYDDYSNFERTKKEIESNYN--IKSLIDKVLNLGHVLITTYVGLKIHADELLKVDWGYV 439
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+ DEGH+++N S+ LK R++LSGTPIQN+L E +SL F+ G LGT F
Sbjct: 440 VLDEGHKIRNPNSEISLTCKRLKTHHRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVF 499
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
++Q+ PI + A++ + + L +++ L+RR L++ LP KTE V+
Sbjct: 500 QQQFAVPINSAGYANATNIQVQTGFKCAVALRDLISPYLLRRLKVDLARDLPKKTEMVLF 559
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
KMT +QK+ Y + SD + + G + G I L+K+CNHPDL+
Sbjct: 560 CKMTQVQKDKYLQFLNSDDLVKIKNGKKQVLFG------IDILRKICNHPDLL------- 606
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
E Y +SGK M + L I K +L + Q L
Sbjct: 607 ----EREFKKHNISYGDPKRSGK---------MQVVKRLLQIWHEQGHKALLFTQSRQML 653
Query: 528 DLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
D+ E L Y+R+DG I R ++ FNK + +F+L+++ GG G+NL
Sbjct: 654 DILESFISSKDPDLSHLTYLRMDGMTDIGHRHALISKFNKEPYD-VFLLTTRVGGLGVNL 712
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
GANR+++FDPDWNP+ D QA R WR GQK+ +YR + GSIEEK+ RQ K+ L+
Sbjct: 713 TGANRIIIFDPDWNPSTDIQARERAWRIGQKREVSIYRLMVAGSIEEKIYHRQIFKQFLT 772
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+ ++ + + R F M+EL LF L
Sbjct: 773 NKIL-SDPNQKRFFKMNELHDLFTL 796
>gi|50309923|ref|XP_454975.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644110|emb|CAH00062.1| KLLA0E22617p [Kluyveromyces lactis]
Length = 1033
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 177/565 (31%), Positives = 280/565 (49%), Gaps = 78/565 (13%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L P+Q+ V+++ E + G I+ DEMGLGKT+Q I + TL L P++
Sbjct: 264 LLFPYQKTCVQWLCELY-----QQGCGGIIGDEMGLGKTIQIIAFLATLHHSRKLNGPVL 318
Query: 206 DKAIIVAPSSLVKNWCNEITKW-----------LGG---RVAALPIDGGSKAEIDNKLNS 251
+V P++++K WCNE W +G + +P + K + + +
Sbjct: 319 ----VVCPATVMKQWCNEFHTWWPPFRAVILHSIGAGMNKGTQIPEEELEKMLMTSNYGT 374
Query: 252 FMQTYG--------------RRPVNP----------ILVISYETFRSHASVLHKNEVGLV 287
F TY R+ V I++ +Y R H+ L G
Sbjct: 375 F--TYNDYEKKEKTRTSLESRKSVKKLLEKVITDGHIIITTYVGLRLHSEALLNVRWGYA 432
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+ DEGH+++N +S LK + R++LSGTPIQN+L E +SL FV G LGT F
Sbjct: 433 ILDEGHKIRNPDSDISLTCKQLKTQNRIILSGTPIQNNLTELWSLFDFVYPGKLGTLPVF 492
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
++Q+ PI G + AS+ + + L +++ L+RR + ++K LP K E V+
Sbjct: 493 QQQFANPINMGGYANASNIQVKTGYKCAVALRDLISPYLLRRVKSDVAKDLPKKNEMVLF 552
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
K+T QK Y + SD + + KG L I L+K+CNHPDL +D +
Sbjct: 553 CKLTQYQKSKYLEFLHSDELMKIRKGKRQ------VLYGIDILRKICNHPDL-LDLKRKK 605
Query: 468 ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
+ +E+A Y +SGK M + L ++ + K +L + Q L
Sbjct: 606 MNDYEDA------DYGNPARSGK---------MQVVKQLLLLWHSQGHKTLLFTQSRQML 650
Query: 528 DLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
D+ + +L K++R+DG+ I R +V+ FN + +F+L+++ GG G+NL
Sbjct: 651 DILQEFISYKDPELSDLKFLRMDGTTNIGSRQSLVDKFNNEPYD-VFLLTTRVGGLGINL 709
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
GANR+++FDPDWNP+ D QA R WR GQK+ +YR + GSIEEK+ RQ K+ LS
Sbjct: 710 TGANRIIIFDPDWNPSTDMQARERAWRIGQKREVTIYRLMIAGSIEEKIYHRQIFKQFLS 769
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+ ++ + R F M++L LF L
Sbjct: 770 NKILK-DPKQKRFFKMNDLHDLFTL 793
>gi|125833380|ref|XP_688972.2| PREDICTED: DNA excision repair protein ERCC-6 [Danio rerio]
Length = 1390
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 273/527 (51%), Gaps = 37/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++M+E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 487 YQQTGVRWMWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYA 541
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G ++ + + + ++G
Sbjct: 542 GLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSKKEKLIPEIVASHG----- 596
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R +LSG+P+
Sbjct: 597 -ILITSYSYIRIMQDYIQRYDWHYVILDEGHKIRNPNAGVTTACKQFRTPHRFILSGSPM 655
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL FV G LGT F +Q+ PI G + AS + A + L +
Sbjct: 656 QNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANASPVQVQTAYKCACVLRDTI 715
Query: 383 NRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR A + LP K EQV+ ++T+ Q+++Y + S V + + G
Sbjct: 716 NPYLLRRMKADVKANLSLPDKNEQVLFCRLTEDQRQVYQTFLDSKEVYQILNG------D 769
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + +P + + S K++
Sbjct: 770 MQVFSGLIALRKICNHPDLFT--------GGPRLLRGIPHDQLTEEEHFGYW-KRSGKMI 820
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L + +++L + Q L++ E K G+ Y+++DG+ TI R ++ F
Sbjct: 821 VVESLLRLWH-KQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLIAQF 879
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ + F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQK+ VYR
Sbjct: 880 NQNKDIFVFILTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVTVYR 939
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F +++ LF L
Sbjct: 940 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDIYELFTL 985
>gi|327281442|ref|XP_003225457.1| PREDICTED: DNA excision repair protein ERCC-6-like [Anolis
carolinensis]
Length = 1441
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 270/532 (50%), Gaps = 41/532 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++++E G I+ DEMGLGKT+Q I + L R
Sbjct: 486 LFKYQQTGVRWLWELHC-----QQVGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNY 540
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ ++IV P++++ W E W RVA L G + I K+ +
Sbjct: 541 RFTGLGPSLIVCPTTVMHQWVKEFHNWWPPFRVAVLHETG---SYIKKKVKLIREIAA-- 595
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
N IL+ SY R +H+ V+ DEGH+++N + A R++LSG
Sbjct: 596 -CNGILITSYSYVRLLQESIHRYNWHYVILDEGHKIRNPNAAVTLACKQFSTPHRIILSG 654
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+PIQN+L E +SL FV G LGT F +Q+ PI G AS + A + L
Sbjct: 655 SPIQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYCNASPVQVKTAYKCACILR 714
Query: 380 GIVNRCLIRRTSA--LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR A +S LP K EQV+ ++TD Q E+Y I S V + + G
Sbjct: 715 DTINPYLLRRMKANVKMSLSLPDKNEQVLFCRLTDEQHEVYKRFIDSKEVYQILNGE--- 771
Query: 438 KLGMTALSSITSLKKLCNHPDLVMD--KIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
M S +T+L+K+CNHPD+ KI G E + + +K
Sbjct: 772 ---MQIFSGLTALRKICNHPDIFSGGPKILKGVPDEE----LNEEDHFGFWKR------- 817
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S K++V++++L I +++L + Q L + E K R Y YV++DG+ T+ R
Sbjct: 818 SGKMIVVESLLK-IWYKQGHRVLLFTQSRQMLHIIEAFLKQRSYSYVKMDGTTTVASRQP 876
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
++ FN+ ++ FIF+L+++ GG G+NL GA+R++++DPDWNP+ D QA R WR GQ K
Sbjct: 877 LISRFNEDTSIFIFLLTTRVGGLGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQTKE 936
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
VYR L+ G+IEEK+ RQ K+ L++ ++ + R F ++L LF L
Sbjct: 937 VTVYRLLTAGTIEEKIYHRQIFKQFLTNRILK-DPKQRRFFKSNDLYELFSL 987
>gi|326924270|ref|XP_003208353.1| PREDICTED: DNA excision repair protein ERCC-6-like [Meleagris
gallopavo]
Length = 1273
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 179/574 (31%), Positives = 291/574 (50%), Gaps = 64/574 (11%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L HQREGV F+Y E G I+AD+MGLGKT+Q I + G LI
Sbjct: 82 LFQHQREGVAFLYRLYR----EGRPGGILADDMGLGKTIQIIAFL-----SGMFDSELIR 132
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+++ P++L+ +W E +W G RV G SK E L + G I+
Sbjct: 133 HVLLIVPTTLISSWLAEFARWTPGLRVKEF--HGTSKIERTRNLEKIQRKNG------IV 184
Query: 266 VISYE----TFRSHASVLHKNEV-GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+ SY+ ++ AS ++ + ++ DE H++K ++T + + + AK R+LL+GT
Sbjct: 185 ITSYQMLINNWKQLASCHGQDFIWDYIILDEAHKIKCPSNKTTKCVYAIPAKHRLLLTGT 244
Query: 321 PIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
P+QN+L E +SL F QG +LGTA+ FR +YE PI R ++ A+ E+ + E L+
Sbjct: 245 PLQNNLQEMWSLFDFACQGSLLGTAKTFRMEYENPITRAREKDATVGEKALGLKISENLM 304
Query: 380 GIVNRCLIRRT-----------------------SALLSKYLPVKTEQVVCIKMTDLQKE 416
I+ +RRT SA + L K + VV + + +Q++
Sbjct: 305 TIIKPYFLRRTKDDIKKNHTEKSDTPLPEDPHEPSAPVMPSLTRKNDFVVWVYLAPVQEK 364
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--IQTGADGFE-- 472
+Y N + D V+ + + L+ +T LKKLC+HP L+ + Q DG E
Sbjct: 365 IYRNFLCLDHVKELLTTTR------SPLAELTVLKKLCDHPRLLSARACTQLDLDGQEYL 418
Query: 473 -----NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTL 527
+ +L + S + LI+ S K M+ L + ++ S + L
Sbjct: 419 EQDHGSEAAVLSGANKIDHLSDESLIQESGK-MLFLLGLLERLREEGHRTLVFSQSRKML 477
Query: 528 DLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGAN 586
D+ ER+ R +K +R+DG++T + +R K + F + +F+L+++ GG G+ L AN
Sbjct: 478 DIIERVLSSRRFKIMRIDGTVTHLTEREKRINAFQSNKDYSVFLLTTQVGGVGITLTAAN 537
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
R+V+FDP WNPA D QA+ R +R GQK+ +YR ++ G++EEK+ +RQ K +L
Sbjct: 538 RVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLIRQTT 597
Query: 647 DCEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
+++ R+FS ELR LF LE+ S T +++
Sbjct: 598 GDKKNPFRYFSKQELRELFTLEDTRTSTTQIQLQ 631
>gi|378733564|gb|EHY60023.1| DNA excision repair protein ERCC-6 [Exophiala dermatitidis
NIH/UT8656]
Length = 1204
Score = 261 bits (667), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 176/545 (32%), Positives = 276/545 (50%), Gaps = 61/545 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++YE T G I+ADEMGLGKT+Q I + L L KP+I
Sbjct: 396 YQKTGVQWLYELYT-----QQVGGIIADEMGLGKTVQIIAFLAGLHYSKKLRKPII---- 446
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLN--------SFMQTYGRRP 260
+V P++++K W NE +W RV L G I N+ + +F T +P
Sbjct: 447 VVCPATVMKQWVNEFHRWWPPFRVTILHSSGSGMINIRNEASKEDKLLDLAFDPTVRNKP 506
Query: 261 -----------VNPIL------VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+ PIL V +Y +++A +L E + DEGH+++N +
Sbjct: 507 LTSTQKAAQKMIRPILEEGGVLVTTYTGLQTYAPLLIPVEWDYAILDEGHKIRNPNTAIT 566
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
L+ R++LSGTP+QN+L+E +SL FV LGT FR Q+E PI +G + A
Sbjct: 567 IYCKELRTPNRIILSGTPMQNNLIELWSLFDFVFPMRLGTLVNFRNQFEIPIRQGGYANA 626
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S+ + A + E L ++ L++R ++ LP K+E+VV +T LQ+ Y +
Sbjct: 627 SNLQVQTAFKCAETLKEAISPYLLQRFKVDVASDLPKKSEKVVFCNLTPLQRAEYQRFLD 686
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S + + G L I L+K+CNHPDL K G++ Y
Sbjct: 687 SKEMEAIINGRRQ------PLYGIDILRKICNHPDLANHKYLAHKPGYK---------YG 731
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK-LRGYKYV 542
KSGK+ V+ +L K K +L + + LD+ E+ K L G+KY
Sbjct: 732 DPAKSGKM--------TVVGALLKSWK-GEGHKTLLFAQHRIMLDILEKFVKSLDGFKYR 782
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ I R +V+ FN + +F+L++K GG G+NL GA+R++++DPDWNP+ D Q
Sbjct: 783 RMDGNTPIPLRQSMVDEFNTDPDLHVFLLTTKVGGLGINLTGADRVIIYDPDWNPSTDLQ 842
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ + R + G+IEEK+ RQ K+ L++ ++ + + F +++L
Sbjct: 843 ARERAWRLGQKREVTICRLMIAGTIEEKIYHRQIFKQFLTNKILK-DPKQRQTFHLNDLH 901
Query: 663 SLFQL 667
LF L
Sbjct: 902 DLFSL 906
>gi|351705605|gb|EHB08524.1| DNA excision repair protein ERCC-6-like protein [Heterocephalus
glaber]
Length = 1181
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 174/569 (30%), Positives = 293/569 (51%), Gaps = 69/569 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 36 LYNQLFEHQKEGVAFLYSLYKDKR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 86
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ A+++ P++L+ W E +KW G RV G SK E LN Q G
Sbjct: 87 SLVNHALLIMPTNLISMWVKEFSKWTPGMRVKTF--HGPSKDERTRSLNRVQQRNG---- 140
Query: 262 NPILVISYETFRSHASVLH--KNEVGL---VLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ L +V + V+ DE H++K+ +++ + A R+L
Sbjct: 141 --VVITTYQMLINNWQQLSSCNGQVFVWDYVILDEAHKIKSSSTKSAICARAIPASNRLL 198
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ +
Sbjct: 199 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIVRAREKDATPGEKALGLKIS 258
Query: 376 EQLIGIVNRCLIRRTSALLSKY------------------------LPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 259 ENLMEIIKPYFLRRTKEEVQKTKSNIPEVRPTEKNSGVDAICEMPSLSRKNDLIIWIRLV 318
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI------- 464
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ ++
Sbjct: 319 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSTRVCHLLHLG 372
Query: 465 ---QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
+G DG E + + A ++ + L+E S K++ L +L ++ +V S
Sbjct: 373 TAKISGQDGNEEDSSDVD---AIAHVTDDTLMEESGKMIFLIDLLKRLRDEGHQTLVF-S 428
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
Q L++ ERL + + +K +R+DG++T + +R K + F + + +F+L+++ GG GL
Sbjct: 429 QSRQILNIIERLLRNKHFKILRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGL 488
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +
Sbjct: 489 TLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKGS 548
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEE 669
L +++ R+F+ ELR LF +E+
Sbjct: 549 LIRQTTGDKKNPYRYFNKQELRELFTVED 577
>gi|68072323|ref|XP_678075.1| DNA repair protein rad54 [Plasmodium berghei strain ANKA]
gi|56498427|emb|CAH96805.1| DNA repair protein rad54, putative [Plasmodium berghei]
Length = 860
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 206/324 (63%), Gaps = 9/324 (2%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ VDP+L+ LR HQREGV+F++EC+ ++ E GCI+AD+MGLGKTLQ I++++TLL+
Sbjct: 122 IEVDPILAQYLREHQREGVQFVFECLMNLKDEKISGCILADDMGLGKTLQSISVLYTLLK 181
Query: 197 QGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTY 256
QG K + + +I+ P+SL+ NW +EI KWL R ++ K +I +KL F Y
Sbjct: 182 QGYNKKAAVRRCLILCPASLINNWNDEINKWLPNRCTVTCVNDSVKEKIVSKLEGF--KY 239
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ IL+ SYE FR + + K+ + +++CDE HRLKN +++TY ++ L AK+R+L
Sbjct: 240 DLKST--ILICSYECFRINNDSIDKSAIDMIICDEAHRLKNDKTKTYTSIYKLSAKKRLL 297
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQNDL E+F+L+ N + FRK++ PIL G+D A++ E+ A+ERL
Sbjct: 298 LSGTPIQNDLGEFFALISLCNPDLFDDTNSFRKKFANPILIGRDKDATEKEQQIASERLA 357
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+L +N+ ++RRT+ LLSK LPVK + IK+ +Q+ LY + + +N
Sbjct: 358 EL-STINKFILRRTNNLLSKVLPVKYLINIFIKLNPIQEGLYV----LFLKDKKLLKSDN 412
Query: 437 TKLGMTALSSITSLKKLCNHPDLV 460
+ + L +I L+K+CNHP L+
Sbjct: 413 SNNKVNVLINIKKLEKICNHPLLL 436
Score = 230 bits (586), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 146/216 (67%), Gaps = 2/216 (0%)
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
LS+K +L +L IK T+DK+V+VSNYTQTLD E L K YK+VRLDG ++IKKR
Sbjct: 538 LSSKFQLLHFLLKTIKHETNDKVVIVSNYTQTLDYMEILCKENHYKFVRLDGGISIKKRH 597
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
KV+ F T + FIF+LSSK+GGCG+NLI +NRL++ DPDWNPAND QA+ARVWR+GQKK
Sbjct: 598 KVISDFTNTDDIFIFLLSSKSGGCGINLISSNRLILLDPDWNPANDKQALARVWREGQKK 657
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
C++YR TG+I+EK+ QRQ K LSS +V S ++ LF + NTI +
Sbjct: 658 ICYIYRLFCTGTIDEKVYQRQISKDGLSSMIVTNTNLSKDQLSDENVKKLFNYKNNTICE 717
Query: 675 THDKIKCSRC--VNGIQVKPPPLESDCTDDLSCWHH 708
THD I+C+RC + +V LE +D++ W H
Sbjct: 718 THDNIECNRCNFKDNTEVYSEQLEDFEEEDVNTWAH 753
>gi|432905593|ref|XP_004077453.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oryzias
latipes]
Length = 1424
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 272/530 (51%), Gaps = 37/530 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++M+E + + A G I+ DEMGLGKT+Q I+ + L R
Sbjct: 498 LYKYQQTGVRWMWE----LHCQQA-GGILGDEMGLGKTIQVISFLAGLSYSKLRTRGSNY 552
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G ++ + + +G
Sbjct: 553 RYAGLGPTVIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSKKEKLIPEIASCHG-- 610
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ SY R+ +L + + ++ DEGH+++N + A + R +LSG
Sbjct: 611 ----ILITSYSAVRNLQDILIRYDWHYIILDEGHKIRNPNAAVTAACKQFQTPHRFILSG 666
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L
Sbjct: 667 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCACVLR 726
Query: 380 GIVNRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR A + LP K EQV+ ++T+ Q+++Y + + S V + + G
Sbjct: 727 DTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQILNG---- 782
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
M S + +L+K+CNHPDL G + +P + S
Sbjct: 783 --DMQVFSGLIALRKICNHPDLF--------SGGPRMLKGIPEDQLTEEEHFGFW-RRSG 831
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
KL+V++++L + +++L S Q LD+ E + Y Y+++DG+ TI R ++
Sbjct: 832 KLIVVESLLRLW-FKQGHRVLLFSQSRQMLDILEVFVRENNYSYLKMDGTTTIASRQPLI 890
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+N+ + FIF+L++K GG G+NL GANR++++DPDWNP+ D QA R WR GQ
Sbjct: 891 ARYNQDRSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTLQVT 950
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+YR L+ G+IEEK+ RQ K+ L++ V+ + R F +++ LF L
Sbjct: 951 IYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDIYELFTL 999
>gi|367051024|ref|XP_003655891.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
gi|347003155|gb|AEO69555.1| hypothetical protein THITE_2120135 [Thielavia terrestris NRRL 8126]
Length = 1161
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 284/550 (51%), Gaps = 60/550 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 379 YQKTGVQWLAELYA-----QQVGGIVGDEMGLGKTVQLISFVAALHYSKMLHKPVI---- 429
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI-------------DNKLNSFMQT 255
+VAP+++++ W NE +W RV+ L G + DNK +
Sbjct: 430 VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMFNVHDEGELEDHVDDWDNKKPTRSSK 489
Query: 256 YGRRPVN------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
++ V+ +LV +Y +++ +L + G + DEGH+++N + L
Sbjct: 490 AAKKIVDRVVKNGHVLVTTYAGLQTYGDILIPVDWGYAVLDEGHKIRNPNTAITIYCKEL 549
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ R++LSGTP+QN+L E +SL F+ LGT FR Q+E PI G + A++ +
Sbjct: 550 RTPNRIILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQFEIPIRLGGYANATNLQIM 609
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
A + E L + L++R ++ LP K+EQV+ K++ Q+E Y +KSD +
Sbjct: 610 TAQKCAETLKETIRPYLLQRLKVDVAADLPKKSEQVLFCKLSRSQREAYELFLKSDEMAS 669
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ + L I L+K+CNHPDL+ ++T Y+ G
Sbjct: 670 ILNRTRQS------LYGIDILRKICNHPDLLDPALKT----------------KPGYQWG 707
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSM 548
+ S K+ V+ ++L + K K +L Q LD+ E +L Y+R+DG
Sbjct: 708 D--VSKSGKMAVVQSLLPMWKRLGH-KTLLFCQGVQMLDIIEAFVRRLDNITYIRMDGKT 764
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
+K+R +V+ FN + +F+L++K GG G+NL GANR+++FDPDWNP+ D QA R W
Sbjct: 765 PVKQRQALVDQFNTDAGLDVFLLTTKVGGLGVNLTGANRVIIFDPDWNPSTDVQARERAW 824
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQL 667
R GQK+ +YR ++ G+IEEK+ RQ K+ L++ V+ D ++ F +++L+ LF L
Sbjct: 825 RLGQKREVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQQTT--FHLNDLQDLFSL 882
Query: 668 E--ENTISDT 675
E+ +++T
Sbjct: 883 SSYEDGVTET 892
>gi|154301204|ref|XP_001551015.1| hypothetical protein BC1G_10272 [Botryotinia fuckeliana B05.10]
Length = 452
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 153/318 (48%), Positives = 190/318 (59%), Gaps = 56/318 (17%)
Query: 70 ILAKPFKVPILNYTGGGYSTK----ALGVRREGA---RKALHDPTAPNALVLYTP----- 117
+ K F VP++N GGGY+ LG+R +GA KALHDP+ A+VLY P
Sbjct: 136 MFRKRFSVPLINKDGGGYNPNRPPPTLGLR-QGAVFVAKALHDPSGEFAIVLYDPTIDEK 194
Query: 118 ---------------------------PQLS-----AH----DLLKIDK----DKIQVHV 137
P L AH ++L I K ++ +V V
Sbjct: 195 PRSIEQAKKEEEDAKKETEKKDGEPEKPVLKLDAPLAHKSLAEILGIKKVVEGERPKVPV 254
Query: 138 VVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQ 197
V+DP L+ +LRPHQ EGVKFMY CVTG+ + A GCIMADEMGLGKTLQCITLMWT+L+Q
Sbjct: 255 VIDPRLAKVLRPHQIEGVKFMYRCVTGMVDDRANGCIMADEMGLGKTLQCITLMWTMLKQ 314
Query: 198 GPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDG-GSKAEIDNKLNSFMQ 254
A KP I+KAII PSSLVKNW NE+ KWLG + IDG SK E+ +L +
Sbjct: 315 STDAGKPTINKAIIACPSSLVKNWANELVKWLGPDAIQPFAIDGKASKEELIQQLRQWAI 374
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
GR P++++SYET R + L ++GL+LCDEGHRLKN +SQT+ AL L RR
Sbjct: 375 ASGRSITRPVIIVSYETLRLYVDELKHTQIGLMLCDEGHRLKNGDSQTFVALNSLNVTRR 434
Query: 315 VLLSGTPIQNDLLEYFSL 332
V+LSGTPIQNDL EYFSL
Sbjct: 435 VILSGTPIQNDLTEYFSL 452
>gi|335306182|ref|XP_003360412.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sus scrofa]
Length = 1247
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 288/574 (50%), Gaps = 64/574 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +Q+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEYQKEGVAFLYSLYRDGR----RGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P+SL+ W E KW G RV G SK E L+ Q G
Sbjct: 143 SLVNHVLLIMPTSLISTWLREFVKWTPGMRVKTF--HGPSKDERTRNLSRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K +++ + A+ R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSLNGREFVWDYVILDEAHKIKTSSTKSAICARAIPARNRIL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEVQKKKSSNPEVRLSEEDPDADAICEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACQLLNLG 428
Query: 468 ADGFENAMNILPTGYAA----SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
A F I + S + L+E S K+ L +L ++ +V S
Sbjct: 429 AVRFSVQDEIEGEDSSGVDHIDQVSDETLMEESGKMTFLMDLLKRLRDEGHQTLVF-SQS 487
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL L
Sbjct: 488 RQILNILERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGLTL 547
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A+R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 548 TAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 607
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
+++ R+FS ELR LF +E+ S T
Sbjct: 608 RQTTGDKKNPFRYFSKQELRELFTIEDFQNSATQ 641
>gi|14140291|gb|AAK54297.1|AC034258_15 putative helicase [Oryza sativa Japonica Group]
Length = 1492
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 208/743 (27%), Positives = 349/743 (46%), Gaps = 129/743 (17%)
Query: 111 ALVLYTPPQLSAH----DLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE----CV 162
+ L P ++S + ++ + +++ + V + +S L+PHQ G++FM+E V
Sbjct: 675 GISLEAPSEVSEYVGDGHIVNLAREEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSV 734
Query: 163 TGVRIED-AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V+ D +GCI+A MGLGKT Q IT ++T++R L + A+IV P +++ NW
Sbjct: 735 KKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQLG---LRTALIVTPVNVLHNWK 791
Query: 222 NEITKWLGG-----RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRS-- 274
E KW RV L +A I L + G +L+I Y +FR+
Sbjct: 792 KEFIKWCPAELKPLRVYMLEDVPRCRANIQYLLKKWRIKGG------VLLIGYSSFRNLS 845
Query: 275 ------------------------HASVLHKNEVG--LVLCDEGHRLKNCESQTYQALMG 308
+ + N+ G +++CDE H +KN + T QAL
Sbjct: 846 LGRSARDKTVANEITNALQMWVLIQSIYICHNQCGPDILVCDEAHIIKNRRADTTQALKQ 905
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
++ +RR+ L+G+P+QN+L+EY+ +V FV +G LG++ EFR +++ PI GQ + ++ +
Sbjct: 906 VRTQRRIALTGSPLQNNLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTSDDV 965
Query: 369 TKANER----LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
N+R EQL G V R + ++ LP K VV +K++ LQ++LY +
Sbjct: 966 KIMNQRSHILYEQLKGFVQRMDMN----VVKNDLPEKKVFVVTVKLSQLQRKLYRRFLDV 1021
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG--------------ADG 470
+ + E + + +L + NHP L+ Q G +
Sbjct: 1022 NGFSSSA-ASEKSFQRSGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVESFLMDESSS 1080
Query: 471 FENAMNILPTGY-------AASYKSGKLLIE------------------LSAKLMVLDTM 505
+N N LP G S KS ++ E S K+++L +
Sbjct: 1081 DDNIENYLPNGEKLRSRNDQLSKKSSDVVNEESNWWENLLDENAYKEADYSGKMVLLLDI 1140
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFE-RLSKL-----------RGYKYVRLDGSMTIKKR 553
L+ DK ++ S TLDL E LSKL +G + R+DGS +R
Sbjct: 1141 LSSCS-ELGDKALVFSQSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRIDGSTPSSER 1199
Query: 554 AKVVETFNKTSNEFI--FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
+VE FN N + ++S++AG G+NL ANR+++ D WNP +D QA+ RVWR G
Sbjct: 1200 QNLVERFNDPENIRVKCTLISTRAGSLGINLHSANRVILLDGSWNPTHDLQAIYRVWRYG 1259
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENT 671
Q KP + YR ++ ++EEK+ +RQ K+ L++ VVD + V+R S E+ LF+ +
Sbjct: 1260 QTKPVYAYRLMAHATMEEKIYKRQVTKEGLAARVVD-RQQVSRTISKEEMLHLFEFGDEE 1318
Query: 672 ISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKHC-WGAGVSF 730
+ + G + P P S+ T+ H+ R +V+ + H W A
Sbjct: 1319 LLEQSGSTMNGHSKVGTEKPPTPNSSETTE------HLPLDRLMVNLLHDHSRWIAS--- 1369
Query: 731 VFYQHST---KAEKSKVVTEEEE 750
+++H T + E+ ++ EE++
Sbjct: 1370 -YHEHETLLQENEEERLTKEEQD 1391
>gi|320587466|gb|EFW99946.1| DNA repair protein rhp26 [Grosmannia clavigera kw1407]
Length = 1202
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 173/567 (30%), Positives = 295/567 (52%), Gaps = 63/567 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ V+++ E +++ G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 409 YQKTAVRWLAELYD-IKV----GGIIGDEMGLGKTVQLISFVAALHYSKRLDKPVI---- 459
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNK--LNSFMQTYGRRPV----- 261
+VAP+++++ W NE +W RV+ L G + ++ + ++G P+
Sbjct: 460 VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVHSEDLIEKDEISWGGSPLKRGSN 519
Query: 262 -------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMG 308
+LV +Y +++ +L + G + DEGH+++N +
Sbjct: 520 VAAKAIVDRVVQHGHVLVTTYAGLQTYGDILIPVDWGYAVLDEGHKIRNPNTALTVYCKE 579
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
L+ R++LSGTPIQN+L E +SL F+ LGT FR Q+E PI G + A++ +
Sbjct: 580 LRTPNRIILSGTPIQNNLTELWSLFDFIYPMRLGTLVTFRNQFEIPIRLGGYANATNLQI 639
Query: 369 TKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVR 428
A + E L ++ L++RT A ++ LP K+EQV+ K+T+ Q++ Y ++SD +
Sbjct: 640 MTAQKCAETLKDAISPYLLQRTKADVATDLPKKSEQVLFCKLTESQRQAYELFLRSDEMS 699
Query: 429 RTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKS 488
+ + L I L+K+CNHPDL +++ +G+ + + KS
Sbjct: 700 AILNRARQS------LYGIDILRKICNHPDLAEPQLKH-KEGYN---------WGSPSKS 743
Query: 489 GKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRG-YKYVRLDGS 547
GK+ V+ +L + K K +L TQ LD+ E ++ G +Y+R+DG
Sbjct: 744 GKM--------QVVKALLQMWKRFGH-KTLLFCQGTQMLDILEIFTQSLGDIQYLRMDGK 794
Query: 548 MTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARV 607
IK R +V+ FN +F+L++K GG G+NL GA+R+++FDPDWNP+ D QA R
Sbjct: 795 TPIKDRQTLVDRFNNDPQLNVFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDVQARERA 854
Query: 608 WRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
WR GQK+ +YR ++ G+IEEK+ RQ K+ L++ V+ + A F + +L LF L
Sbjct: 855 WRLGQKRQVTIYRLMTAGTIEEKIYHRQIFKQFLTNKVLKDPKQRA-SFGLHDLHDLFSL 913
Query: 668 E--ENTISDTHDKIKCSRCVNGIQVKP 692
E+ +++T + + N + + P
Sbjct: 914 GSYEDGVTETSELFRG----NEVHITP 936
>gi|348507212|ref|XP_003441150.1| PREDICTED: DNA excision repair protein ERCC-6 [Oreochromis
niloticus]
Length = 1436
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/530 (31%), Positives = 272/530 (51%), Gaps = 37/530 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q+ GV++M+E + + A G I+ DEMGLGKT+Q I+ + L R
Sbjct: 497 LYKYQQTGVRWMWE----LHCQQA-GGILGDEMGLGKTIQVISFLAGLSYSKLRTRGSNY 551
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 552 RYAGLGPTVIVCPATVMHQWVKEFHTWWPLFRVAVLHETGSFTSNKEKLIPEIAACHG-- 609
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ SY R+ L + ++ DEGH+++N + A + R +LSG
Sbjct: 610 ----ILITSYSAVRNMQETLQLYDWHYIILDEGHKIRNPNAGVTVACKQFRTPHRFILSG 665
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
+P+QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L
Sbjct: 666 SPMQNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCACVLR 725
Query: 380 GIVNRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
+N L+RR A + LP K EQV+ ++T+ Q+++Y + + S V + + G
Sbjct: 726 DTINPYLLRRMKADVKANLSLPDKNEQVLFCRLTEEQRQVYQSFLDSKEVYQILNGD--- 782
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
M S + +L+K+CNHPDL G + +P + + S
Sbjct: 783 ---MQVFSGLIALRKICNHPDLF--------SGGPRILRGIPEDQLTEEEHFGFW-KRSG 830
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
KL+V++++L + +++L + Q LD+ E + Y Y+++DG+ TI R ++
Sbjct: 831 KLIVVESLLRLW-FRQSHRVLLFTQSRQMLDILEVFVRENNYSYLKMDGTTTISSRQPLI 889
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+N+ + FIF+L++K GG G+NL GANR++++DPDWNP+ D QA R WR GQK+
Sbjct: 890 ARYNEDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVT 949
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+YR L+ G+IEEK+ RQ K+ L++ V+ + R F +++ LF L
Sbjct: 950 IYRLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDIYELFTL 998
>gi|322710752|gb|EFZ02326.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium anisopliae
ARSEF 23]
Length = 1162
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 278/533 (52%), Gaps = 51/533 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 398 YQKTGVQWLAELY-----KQNVGGIIGDEMGLGKTVQLIAFIAALHHSKMLERPVI---- 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAE--------------IDNKLNSFMQ 254
+VAP++L++ W +E +W RV+ L G + N+ + +
Sbjct: 449 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMMNPQFEDDYDVEHYRPVANRSLNAAR 508
Query: 255 TYGRRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
+ RR V+ +LV +Y +++A L E G + DEGH+++N ++ L
Sbjct: 509 SIVRRVVDKGHVLVTTYTGLQTYADELLPVEWGYAVLDEGHKIRNPNAEITVTCKELNTP 568
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 569 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQGGYANASNLQVMTAE 628
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L ++ L++R ++ LP KTEQV+ K+T+ Q++ Y + SD V +
Sbjct: 629 KCAEALKETISEYLLQRLKIDVAADLPEKTEQVLFCKLTEGQRKAYETFLGSDEVSAILN 688
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ G I L+K+CNHPDL+ + + TGY ++ S KL
Sbjct: 689 RRRQSLYG------IDILRKICNHPDLLDKSLGS------------KTGY--NFGSPKL- 727
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
SAKL + +L + + K +L S L++ E+ + Y+RLDG + +
Sbjct: 728 ---SAKLELTKDLLQKVMIPNGHKTLLFSQGKLMLNIIEKCMRECNISYLRLDGETPVDQ 784
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 785 RQPMIDRFNTDLSIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 844
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF
Sbjct: 845 NKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLF 896
>gi|410730645|ref|XP_003980143.1| hypothetical protein NDAI_0G04840 [Naumovozyma dairenensis CBS 421]
gi|401780320|emb|CCK73467.1| hypothetical protein NDAI_0G04840 [Naumovozyma dairenensis CBS 421]
Length = 1090
Score = 259 bits (663), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 184/599 (30%), Positives = 292/599 (48%), Gaps = 97/599 (16%)
Query: 118 PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
P +D+ KI D + ++L +Q+ V+++YE + G I+ D
Sbjct: 300 PDAKLNDIFKIPGD-----------IFSLLFNYQKTCVQWLYELH-----QQNSGGIIGD 343
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW---------- 227
EMGLGKT+Q I + +L G L P++ IV P++++K WCNE+ W
Sbjct: 344 EMGLGKTIQIIAFLASLHHSGLLDGPVL----IVCPATVMKQWCNELHHWWPPFRTIILH 399
Query: 228 -LGGRVAALPIDGGSKAEIDNKL-NSF--------MQTYGRRPVNP-------------- 263
+G + S E +N L NS +Q +R
Sbjct: 400 SIGSGMGINQKKNLSDEEFENLLMNSNPNDISYEDLQNNTKRKTKSHLENDINIQSLINT 459
Query: 264 ------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
I++ +Y R H+ L + DEGH+++N +S +K R++L
Sbjct: 460 VIEKGHIIITTYVGLRLHSDKLLNVNWSYAILDEGHKIRNPDSDISITCKKIKTHNRIIL 519
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
SGTPIQN+L+E +SL F+ G LGT F++Q+ PI G + AS+ + +
Sbjct: 520 SGTPIQNNLIELWSLFDFIYPGKLGTLPVFQQQFIIPINTGGYANASNIQVQTGIKCATA 579
Query: 378 LIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENT 437
L +++ L+RR ++K LP K E V+ K+T Q+ Y + S+ + + +KGG+
Sbjct: 580 LRDLISPYLLRRVKNDVAKDLPEKKEMVLFCKLTQYQRIKYLEFLNSNELTQ-IKGGKR- 637
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
L I L+K+CNHPDL+ D+ + D Y +SGK
Sbjct: 638 ----HVLYGIDILRKICNHPDLI-DRNEKQYD----------LDYGNPKRSGK------- 675
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL--SKLRGY-------KYVRLDGSM 548
M + L ++ K++L + Q LD+ E S+L+ + KY+R+DG+
Sbjct: 676 --MQVVKQLLLLWHNEKHKVLLFTQSRQMLDILENFINSELKSHSEFSTPLKYLRMDGTT 733
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
I R K+V+ FN + +F+L+++ GG G+NL GANR+++FDPDWNP+ D QA R W
Sbjct: 734 NISNRQKLVDQFNNEDYD-VFLLTTRVGGLGINLTGANRIIIFDPDWNPSTDMQARERAW 792
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
R GQK+ +YR + GSIEEK+ RQ K+ L++ ++ + R F M+ELR LF L
Sbjct: 793 RIGQKREVSIYRLMVAGSIEEKIYHRQIFKQFLTNKIL-TDPKQKRFFKMNELRDLFTL 850
>gi|410080572|ref|XP_003957866.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
gi|372464453|emb|CCF58731.1| hypothetical protein KAFR_0F01350 [Kazachstania africana CBS 2517]
Length = 1058
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 182/566 (32%), Positives = 287/566 (50%), Gaps = 78/566 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+ ++L +Q+ V+++YE + G I+ DEMGLGKT+Q I + +L G L
Sbjct: 282 IYSLLFGYQKTCVQWLYEL-----FQQQSGGIIGDEMGLGKTIQVIAFVASLHHSGLLNG 336
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKL------------- 249
P++ IV P++++K W NE+ W A + GS + KL
Sbjct: 337 PVL----IVCPATVMKQWVNELHHWWPPLRAIILHAIGSGMSMKKKLTEDELEQILLRST 392
Query: 250 ------NSFMQT----YG-----------RRPVNP--ILVISYETFRSHASVLHKNEVGL 286
N F ++ Y + VN IL+ +Y R H+ L K
Sbjct: 393 PDEFSYNDFQKSSKAKYALESDMNLVSLIDKVVNNGHILITTYVGLRIHSDKLLKINWAY 452
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
+ DEGH+++N S+ LK + R++LSGTPIQN+L E +SL F+ G LGT
Sbjct: 453 AILDEGHKIRNPNSEIAITCKKLKTRNRIILSGTPIQNNLNELWSLFDFILPGKLGTLPV 512
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F++Q+ PI G + AS+ + + L I++ L+RR + ++K LP K E V+
Sbjct: 513 FQQQFVMPINMGGYANASNIQVQTGYKCAVTLRDIISPYLLRRVKSDVAKDLPHKKEMVL 572
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
K+T Q+ Y + S + +KGG+ L I L+K+CNHPD ++DK
Sbjct: 573 FCKLTQYQRNKYIEFLNSKELSE-IKGGKR-----HVLYGIDILRKICNHPD-ILDK--- 622
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
D E+ ++ Y +SG K+ V+ +L + K K +L + Q
Sbjct: 623 --DKLEDDVS-----YGNPKRSG--------KMQVVKQLLLLWK-DEGHKTLLFTQSRQM 666
Query: 527 LDLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLN 581
LD+ E+ ++ Y+R+DG+ I KR ++V+ FN N +F+L+++ GG G+N
Sbjct: 667 LDILEQFISYKDPEMENINYLRMDGTTNISKRQELVDRFN-NENYDLFLLTTRVGGLGVN 725
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
L GANR+++FDPDWNP+ D QA R WR GQK+ +YR + +GSIEEK+ RQ K+ L
Sbjct: 726 LTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVSGSIEEKIYHRQIFKQFL 785
Query: 642 SSCVVDCEEDVARHFSMSELRSLFQL 667
++ ++ + R F M+EL LF L
Sbjct: 786 TNKIL-SDPKQKRFFKMNELHDLFSL 810
>gi|58331268|ref|NP_060139.2| DNA excision repair protein ERCC-6-like [Homo sapiens]
gi|121948339|sp|Q2NKX8.1|ERC6L_HUMAN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like; AltName:
Full=PLK1-interacting checkpoint helicase; AltName:
Full=Tumor antigen BJ-HCC-15
gi|84798788|gb|AAI11487.1| Excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Homo sapiens]
gi|155675838|gb|ABU25227.1| Plk1-interacting checkpoint helicase [Homo sapiens]
Length = 1250
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|338729291|ref|XP_001488364.3| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Equus
caballus]
Length = 1286
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 286/574 (49%), Gaps = 64/574 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +Q+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 134 LHNQLFEYQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 184
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 185 SLVNHVLLIMPTNLINMWIKEFAKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 238
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ + V+ DE H++K +++ + A R+L
Sbjct: 239 --VIITTYQMLINNWQQLSSLNSQQFVWDYVILDEAHKIKTSSTKSAICARAIPASNRIL 296
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + FR +YE PI R ++ A+ E+ +
Sbjct: 297 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKIS 356
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 357 ENLMAIIKPYFLRRTKEEVQKKKSSNPEVRLDEKNPDADAICEMPSLSRKNDLIIWIRLV 416
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 417 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACHLLNLG 470
Query: 468 ADGF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
A F EN + L+E S K++ L +L ++ +V S
Sbjct: 471 AVKFSVQDENEGEDSSDVDHLDKITDDTLMEESGKMIFLMDLLQRLRDEGHQTLVF-SQS 529
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL L
Sbjct: 530 RQILNIIERLLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLLTTQVGGVGLTL 589
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 590 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 649
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
+++ R+FS ELR LF +E+ S T
Sbjct: 650 RQTTGDKKNPFRYFSKQELRELFTIEDFQNSATQ 683
>gi|410257904|gb|JAA16919.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
gi|410349947|gb|JAA41577.1| excision repair cross-complementing rodent repair deficiency,
complementation group 6-like [Pan troglodytes]
Length = 1250
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|391327035|ref|XP_003738014.1| PREDICTED: DNA excision repair protein ERCC-6-like [Metaseiulus
occidentalis]
Length = 1213
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 172/540 (31%), Positives = 278/540 (51%), Gaps = 45/540 (8%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +Q+ VK+++E + G I+ DEMGLGKT+Q I + L R
Sbjct: 358 LWNKLYKYQQTCVKWLWELH-----QFKCGGIIGDEMGLGKTIQAIAFLRGL-RHSNTKL 411
Query: 203 PL-----IDKAIIVAPSSLVKNWCNEITKWL-GGRVAAL----PIDGGSKAEIDNKLNSF 252
P + I+V P++++ W E KW RV L G K+ + ++++S
Sbjct: 412 PGEAFRGLGPIILVTPATVMHQWVKEFHKWFPRQRVGVLHNSGSYSGRKKSTLIDEIHSS 471
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
T L+ SY+ + L + ++ DEGH+++N ++Q A+ +
Sbjct: 472 KGT---------LITSYQGIVMYQDDLIHHHWHYIILDEGHKIRNPDAQATLAVKQFRTP 522
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
R++LSG+PIQN+L E +SL FV G LGT F ++ PI G + A++ +
Sbjct: 523 HRLILSGSPIQNNLRELWSLFDFVFPGKLGTLPVFMAEFAVPITHGGYANATETQVAVGY 582
Query: 373 ERLEQLIGIVNRCLIRRTSALL--SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRT 430
L + L+RR + + S LP K+EQV+ K+T+ Q++LY ++S V++
Sbjct: 583 RCATILRDTIKPYLLRRMKSDVKTSINLPPKSEQVIFCKLTERQRDLYREYVESHEVKKI 642
Query: 431 MKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGK 490
+ G M + +L+K+CNHPDL DG + I + S G
Sbjct: 643 LDGR------MQIFVGLVNLRKICNHPDLY--------DGGPDKDIITSSRKVPSSSFG- 687
Query: 491 LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
+ S KLMV++ +L + +++L + Q L + E + R Y Y+ +DGS I
Sbjct: 688 -FYKRSGKLMVVEALLKLWSKQKQ-RVLLFTQSRQMLRILEEFVQNRHYTYLSMDGSTAI 745
Query: 551 KKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
R ++ FN+ S+ FIF+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR
Sbjct: 746 STRQPAIDRFNQDSSIFIFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDMQARERAWRI 805
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
GQ+K VYR ++ G+IEEK+ RQ K+ L++ V+ + R F +E+ LF L E+
Sbjct: 806 GQQKDVTVYRLMTAGTIEEKIYHRQIFKQFLTNRVLKNPKQ-RRFFKTNEMYELFTLSED 864
>gi|332861007|ref|XP_003317563.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Pan troglodytes]
Length = 1250
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|397467179|ref|XP_003805304.1| PREDICTED: DNA excision repair protein ERCC-6-like [Pan paniscus]
Length = 1250
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEDRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|302773596|ref|XP_002970215.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii]
gi|300161731|gb|EFJ28345.1| hypothetical protein SELMODRAFT_441095 [Selaginella moellendorffii]
Length = 1901
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 299/599 (49%), Gaps = 94/599 (15%)
Query: 137 VVVDPVLSNILRPHQREGVKFMY----ECVTGVRIED-AYGCIMADEMGLGKTLQCITLM 191
V + +S L+PHQ GV+FM+ E V V+ D GCI+A MGLGKTLQ I +
Sbjct: 966 VRIPASISKHLKPHQLCGVRFMWDNCIESVEKVKSGDVGLGCILAHSMGLGKTLQVIAFL 1025
Query: 192 WTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNS 251
+T++R L ++V P +++ NW E KW VA L + + + S
Sbjct: 1026 YTVMRNVDLN---FKTVLVVVPVNVLHNWKREFEKWRPAEVAPLEVSMLDTSRDNATRAS 1082
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNE---------------VGLVLCDEGHRLK 296
++++ + +++I Y FR+ ++ H + +V+CDEGH +K
Sbjct: 1083 LLKSWKEK--GGVMLIGYAAFRNLSTGSHVKDKETRDTLCKCLQDPGADIVVCDEGHTIK 1140
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ++ AL +K+ RR+ ++G+P+QN+L+EY+ +V FV G LG FR + + PI
Sbjct: 1141 NDKADITIALQRVKSGRRIAMTGSPLQNNLMEYYCMVDFVRPGFLGPQAIFRNKVQNPIA 1200
Query: 357 RGQ--DSCASDAERTKANERL--EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
GQ DS D ++ K + ++L G V RR +L LP K V+ ++++
Sbjct: 1201 NGQHADSTPDDVKKMKRTVHILHKRLSGFVQ----RRDMTVLKDELPPKCVWVISVRLSP 1256
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM----------- 461
LQK+LY + R +KL L K+ NHPDL+
Sbjct: 1257 LQKQLYKKFLSLCETGR-------SKL----FDHYHVLAKIWNHPDLLAIAKEQRLNEEF 1305
Query: 462 -------DKIQTG----------ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
D + G AD FE IL +S + ++E S K++++ T
Sbjct: 1306 IVDSEKEDSAENGQGCPKRASPEADSFEWCEEIL-------KESKRDVLENSGKMVLIMT 1358
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL-----------RGYKYVRLDGSMTIKKR 553
+L+ + + +K ++ S TLDL E +G +++RLDG+ T +R
Sbjct: 1359 LLS-LNSSRGEKTLVFSQSLHTLDLIENFLDTIPLGGSQDVWNKGKEWLRLDGNTTASRR 1417
Query: 554 AKVVETFNKTSNEFI--FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
++ + FN +N I ++S+KAG G N+ GANR+++ D WNP +D QA+ R WR G
Sbjct: 1418 QQIADIFNDPNNTAIKCLLISTKAGSLGTNMTGANRVIIVDGSWNPTHDLQALFRAWRYG 1477
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
Q KP FVYR L+ G++EEK+ RQ K+ +++ V+D + V RH + +L ++ L+++
Sbjct: 1478 QTKPVFVYRLLAYGTMEEKIYNRQLTKEGIAARVLDAHQ-VGRHLNADDLELMYTLDDD 1535
>gi|148682181|gb|EDL14128.1| mCG2900 [Mus musculus]
Length = 1217
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 291/577 (50%), Gaps = 74/577 (12%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G L++ +
Sbjct: 77 HQKEGIAFLYSLYKDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 127
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P++L+ W NE KW G RV G SK+E L Q G +++ +
Sbjct: 128 LIMPTNLINTWVNEFAKWTPGMRVKTF--HGSSKSERTRSLTRIQQRNG------VVITT 179
Query: 269 YE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
Y+ +F A V V+ DE H++K+ +++ + A R+LL+
Sbjct: 180 YQMLLNNWQQLASFNGQAFVW-----DYVILDEAHKIKSASTKSAVCARAIPASNRLLLT 234
Query: 319 GTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
GTP+QN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ + E
Sbjct: 235 GTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISEN 294
Query: 378 LIGIVNRCLIRRT------------SALLSKYLPV------------KTEQVVCIKMTDL 413
L+ I+ +RRT A L + P K + +V I++ L
Sbjct: 295 LMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPL 354
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGAD 469
Q+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 355 QEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACRLLNLGTA 408
Query: 470 GF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
F EN + + + K LI+ S K++ L ++L ++ +V S +
Sbjct: 409 TFSAQDENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVF-SQSIK 467
Query: 526 TLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
L++ ERL K + +K +R+DG++T + +R K ++ F + +F+L+++ GG GL L
Sbjct: 468 ILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA 527
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 528 ATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQ 587
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+F+ EL+ LF + + S T +++C
Sbjct: 588 TTGEKKNPFRYFTKQELKELFTVGDLQKSATQMQLQC 624
>gi|345492169|ref|XP_001602814.2| PREDICTED: DNA excision repair protein ERCC-6-like [Nasonia
vitripennis]
Length = 1154
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 274/532 (51%), Gaps = 28/532 (5%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW-----TLLRQGPLA 201
L +Q+ VK+M+E + G ++ DEMGLGKT+Q I + LL G
Sbjct: 315 LYKYQKVAVKWMWELHSR-----NLGGLLGDEMGLGKTVQVIAFLAGLDCSDLLSDGGRF 369
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
+ L ++IV P++L++ W W R L G + +ID L++
Sbjct: 370 RGL-GPSLIVCPATLLEQWVKHFHDWWPTLRAVILHQSGTFQGDIDELLHTLKD------ 422
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
ILV SY H L K + V+ DEGH+++N +++ + + R+LL+G+
Sbjct: 423 -GGILVTSYTGVLIHKEPLLKFKWHYVILDEGHKIRNPDAKVSKVVKAFLTPHRILLTGS 481
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN L E +SL F+ G LGT F + PI RG + AS + A + L
Sbjct: 482 PMQNSLKELWSLFDFILPGKLGTLPAFMEHCAGPITRGGYANASQLQEATALQVATMLKD 541
Query: 381 IVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM-KGGENT 437
+ ++RRT + + LP K EQV+ +T+ Q++LY ++SD V + + E
Sbjct: 542 AITPYMLRRTKFDVQHHVSLPDKNEQVLFCSLTEEQRQLYIQYLRSDDVSFVIHERREGG 601
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
+ L ++T+L+K+CNHPDL + + E+A + + K +
Sbjct: 602 RYRARLLVALTALRKICNHPDLFLYTDNNQEESDEDAALEVDENEMEKFGHWKR----AG 657
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
K+ V+ ++L + K +++L + Q + + E L + Y Y+R+DG+ + +R V
Sbjct: 658 KMTVVRSLLKIWK-KQGHRVLLFTQSRQMMHILEGLLQKEKYNYLRMDGTTPMGQRQLTV 716
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
FN+ + F+F+L+++ GG G+NL GANR++++DPDWNPA D QA R WR GQ+K
Sbjct: 717 TKFNQDPSYFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPATDAQARERAWRIGQEKSVT 776
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
VYR ++ G+IEEKM RQ K LS+ V++ + R F ++L LF L E
Sbjct: 777 VYRLITAGTIEEKMYHRQVFKILLSNKVLE-DPRQRRLFRTTDLTELFNLNE 827
>gi|449468564|ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
Length = 1221
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 173/553 (31%), Positives = 277/553 (50%), Gaps = 69/553 (12%)
Query: 150 HQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDK 207
+Q+ GV++++E C G I+ DEMGLGKT+Q ++ + L + KP
Sbjct: 397 YQKVGVQWLWELHCQRA-------GGIIGDEMGLGKTVQVLSFLGAL-HFSNIYKP---- 444
Query: 208 AIIVAPSSLVKNWCNEITKWLGGRVAAL---------------PIDGGSKAE----IDNK 248
+IIV P +LV+ W E KW +A + DG ++E D +
Sbjct: 445 SIIVCPVTLVRQWKREARKWCPRLLAEILHDSAHDPTYKNMREKSDGSDESEDSEGSDYR 504
Query: 249 LNSFMQTYGR---------RPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCE 299
NS + R R + +L+ +YE R L E G + DEGHR++N
Sbjct: 505 KNSQPKGTKRWDALINRVLRSESGLLITTYEQLRLLGDKLLDIEWGYAILDEGHRIRNPN 564
Query: 300 SQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ 359
++ L+ R++++G+PIQN L E +SL FV G LG F ++ PI G
Sbjct: 565 AEVTLVCKQLQTVHRIIMTGSPIQNKLKELWSLFDFVFPGKLGVLPVFEAEFAVPISVGG 624
Query: 360 DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYT 419
+ AS + + A L ++ L+RR A ++ +LP KTE V+ +T Q+ +Y
Sbjct: 625 YANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLPKKTEHVLFCSLTSEQRSVYR 684
Query: 420 NLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILP 479
+ S V+ + G N+ LS I ++K+CNHPDL+ + F+N P
Sbjct: 685 AFLASSEVKSILDGNRNS------LSGIDVMRKICNHPDLLERE-----HAFQNPDYGNP 733
Query: 480 TGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGY 539
E S K+ V++ +L V K +++L + Q LD+ ER GY
Sbjct: 734 --------------ERSGKMKVVEQVLKVWK-EQGHRVLLFAQTQQMLDILERFLVGGGY 778
Query: 540 KYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
Y R+DG +K+R +++ FN + F+F+L++K GG G NL GA+R+++FDPDWNP+
Sbjct: 779 TYRRMDGGTPVKQRMALIDEFNNSCEVFVFILTTKVGGLGTNLTGADRVIIFDPDWNPST 838
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMS 659
D QA R WR GQ++ VYR ++ G+IEEK+ RQ +K L++ ++ + R F
Sbjct: 839 DMQARERAWRIGQQRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ-KRFFKAR 897
Query: 660 ELRSLFQLEENTI 672
+++ LF L E+ +
Sbjct: 898 DMKDLFTLNEDGM 910
>gi|27414501|ref|NP_666347.2| DNA excision repair protein ERCC-6-like [Mus musculus]
gi|81873794|sp|Q8BHK9.1|ERC6L_MOUSE RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|22902399|gb|AAH37660.1| Excision repair cross-complementing rodent repair deficiency
complementation group 6 - like [Mus musculus]
gi|27368137|gb|AAN87172.1| excision repair cross-complementing rodent repair deficiency
complementation group 6 C-like [Mus musculus]
Length = 1240
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 291/577 (50%), Gaps = 74/577 (12%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G L++ +
Sbjct: 100 HQKEGIAFLYSLYKDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 150
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P++L+ W NE KW G RV G SK+E L Q G +++ +
Sbjct: 151 LIMPTNLINTWVNEFAKWTPGMRVKTF--HGSSKSERTRSLTRIQQRNG------VVITT 202
Query: 269 YE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
Y+ +F A V V+ DE H++K+ +++ + A R+LL+
Sbjct: 203 YQMLLNNWQQLASFNGQAFVW-----DYVILDEAHKIKSASTKSAVCARAIPASNRLLLT 257
Query: 319 GTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
GTP+QN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ + E
Sbjct: 258 GTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISEN 317
Query: 378 LIGIVNRCLIRRT------------SALLSKYLPV------------KTEQVVCIKMTDL 413
L+ I+ +RRT A L + P K + +V I++ L
Sbjct: 318 LMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPL 377
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGAD 469
Q+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 378 QEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACRLLNLGTA 431
Query: 470 GF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
F EN + + + K LI+ S K++ L ++L ++ +V S +
Sbjct: 432 TFSAQDENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVF-SQSIK 490
Query: 526 TLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
L++ ERL K + +K +R+DG++T + +R K ++ F + +F+L+++ GG GL L
Sbjct: 491 ILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA 550
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 551 ATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQ 610
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+F+ EL+ LF + + S T +++C
Sbjct: 611 TTGEKKNPFRYFTKQELKELFTVGDLQKSATQMQLQC 647
>gi|395862525|ref|XP_003803497.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1252
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 175/567 (30%), Positives = 281/567 (49%), Gaps = 64/567 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGVAFFYSLYRDGR----KGGILADDMGLGKTIQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFVKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----TFRSHASVLHKNEV-GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ +R +S + V V+ DE H++K +++ + A R+L
Sbjct: 197 --VIITTYQMLINNWRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R + A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACQLLNLG 428
Query: 468 ADGFE----NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
F N P + + L+E S K++ L +L ++ +V S
Sbjct: 429 TVKFSALDGNEGEDFPDMDHIDQITDETLMEESGKMIFLMDLLKRLRDEGHQTLVF-SQS 487
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
Q L++ E L K R +K +R+DG++T + +R K + F K + +F+L+++ GG GL L
Sbjct: 488 RQILNIIEHLLKNRHFKTLRIDGTITHLLEREKRINLFQKNKDYSVFLLTTQVGGVGLTL 547
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 548 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 607
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEE 669
+++ R+FS ELR LF +E+
Sbjct: 608 RQTTGEKKNPFRYFSKQELRELFTIED 634
>gi|26324980|dbj|BAC26244.1| unnamed protein product [Mus musculus]
Length = 1240
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 291/577 (50%), Gaps = 74/577 (12%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G L++ +
Sbjct: 100 HQKEGIAFLYSLYKDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 150
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P++L+ W NE KW G RV G SK+E L Q G +++ +
Sbjct: 151 LIMPTNLINTWVNEFAKWTPGMRVKTF--HGSSKSERTRSLTRIQQRNG------VVITT 202
Query: 269 YE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
Y+ +F A V V+ DE H++K+ +++ + A R+LL+
Sbjct: 203 YQMLLNNWQQLASFNGQAFVW-----DYVILDEAHKIKSASTKSAVCARAIPASNRLLLT 257
Query: 319 GTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
GTP+QN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ + E
Sbjct: 258 GTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISEN 317
Query: 378 LIGIVNRCLIRRT------------SALLSKYLPV------------KTEQVVCIKMTDL 413
L+ I+ +RRT A L + P K + +V I++ L
Sbjct: 318 LMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPL 377
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGAD 469
Q+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 378 QEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACRLLNLGTA 431
Query: 470 GF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
F EN + + + K LI+ S K++ L ++L ++ +V S +
Sbjct: 432 TFSAQDENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVF-SQSIK 490
Query: 526 TLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
L++ ERL K + +K +R+DG++T + +R K ++ F + +F+L+++ GG GL L
Sbjct: 491 ILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA 550
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 551 ATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQ 610
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+F+ EL+ LF + + S T +++C
Sbjct: 611 TTGEKKNPFRYFTKQELKELFTVGDLQKSATQMQLQC 647
>gi|326523023|dbj|BAJ88557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1220
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 270/548 (49%), Gaps = 66/548 (12%)
Query: 150 HQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDK 207
+Q+ GV++++E C G I+ DEMGLGKT+Q ++ + L G + KP
Sbjct: 411 YQKVGVQWLWELHCQRA-------GGIIGDEMGLGKTVQVLSFLGALHDSG-MYKP---- 458
Query: 208 AIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG----------SKAEIDNKLNSFMQTYG 257
+I++ P +L++ W E +KW + D S +E D +S +
Sbjct: 459 SIVICPVTLLQQWRREASKWYPKFKVEILHDSANSSSKKGKRYSDSESDVSWDSDQEEVT 518
Query: 258 R------------RPVNP---ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
R R VN +L+ +YE R L E G + DEGHR++N ++
Sbjct: 519 RVKPAQKWDDLISRVVNSGSGLLLTTYEQLRIIREKLLDIEWGYAVLDEGHRIRNPNAEV 578
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
L+ R++++G PIQN L E +SL FV G LG F ++ PI G +
Sbjct: 579 TLVCKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFETEFSVPITVGGYAN 638
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI 422
A+ + + A L ++ L+RR A ++ LP KTEQV+ +T Q+ Y +
Sbjct: 639 ATPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAQLPKKTEQVLFCSLTQEQRATYRAFL 698
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY 482
S V + G N+ G I L+K+CNHPDL+ + + N
Sbjct: 699 ASSEVEQIFDGNRNSLYG------IDVLRKICNHPDLLEREQAAQNPDYGN--------- 743
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
IE S K+ V++ +L V K +++L + Q LD+ E R Y+Y
Sbjct: 744 ----------IERSGKMKVVEQILKVWK-DQGHRVLLFAQTQQMLDILESFLTARDYQYR 792
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG K+R +++ FN T FIF+L++K GG G NL GANR+++FDPDWNP+ D Q
Sbjct: 793 RMDGLTPPKQRMALIDEFNNTDEIFIFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDMQ 852
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELR 662
A R WR GQK+ VYR ++ G+IEEK+ RQ +K L++ V+ + R F +++
Sbjct: 853 ARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKVLKNPQQ-RRFFKARDMK 911
Query: 663 SLFQLEEN 670
LF L+++
Sbjct: 912 DLFTLQDD 919
>gi|302793538|ref|XP_002978534.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii]
gi|300153883|gb|EFJ20520.1| hypothetical protein SELMODRAFT_443867 [Selaginella moellendorffii]
Length = 1858
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 182/599 (30%), Positives = 299/599 (49%), Gaps = 94/599 (15%)
Query: 137 VVVDPVLSNILRPHQREGVKFMY----ECVTGVRIED-AYGCIMADEMGLGKTLQCITLM 191
V + +S L+PHQ GV+FM+ E V V+ D GCI+A MGLGKTLQ I +
Sbjct: 970 VRIPASISKHLKPHQLCGVRFMWDNCIESVEKVKSGDVGLGCILAHSMGLGKTLQVIAFL 1029
Query: 192 WTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNS 251
+T++R L ++V P +++ NW E KW VA L + + + S
Sbjct: 1030 YTVMRNVDLN---FKTVLVVVPVNVLHNWKREFEKWRPAEVAPLEVSMLDTSRDNATRAS 1086
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNE---------------VGLVLCDEGHRLK 296
++++ + +++I Y FR+ ++ H + +V+CDEGH +K
Sbjct: 1087 LLKSWKEK--GGVMLIGYAAFRNLSTGSHVKDKETRDTLCKCLQDPGADIVVCDEGHTIK 1144
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ++ AL +K+ RR+ ++G+P+QN+L+EY+ +V FV G LG FR + + PI
Sbjct: 1145 NDKADITIALQRVKSGRRIAMTGSPLQNNLMEYYCMVDFVRPGFLGPQAIFRNKVQNPIA 1204
Query: 357 RGQ--DSCASDAERTKANERL--EQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
GQ DS D ++ K + ++L G V RR +L LP K V+ ++++
Sbjct: 1205 NGQHADSTPDDVKKMKRTVHILHKRLSGFVQ----RRDMTVLKDELPPKCVWVISVRLSP 1260
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM----------- 461
LQK+LY + R +KL L K+ NHPDL+
Sbjct: 1261 LQKQLYKKFLSLCETGR-------SKL----FDHYHVLAKIWNHPDLLAIAKEQRLNEEF 1309
Query: 462 -------DKIQTG----------ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
D + G AD FE IL +S + ++E S K++++ T
Sbjct: 1310 IVDSEKEDSAENGQGCPKRASPEADSFEWCEEIL-------KESKRDVLENSGKMVLIMT 1362
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL-----------RGYKYVRLDGSMTIKKR 553
+L+ + + +K ++ S TLDL E +G +++RLDG+ T +R
Sbjct: 1363 LLS-LNSSRGEKTLVFSQSLHTLDLIENFLDTIPLGGSQDVWNKGREWLRLDGNTTASRR 1421
Query: 554 AKVVETFNKTSNEFI--FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
++ + FN +N I ++S+KAG G N+ GANR+++ D WNP +D QA+ R WR G
Sbjct: 1422 QQIADIFNDPNNTAIKCLLISTKAGSLGTNMTGANRVIIVDGSWNPTHDLQALFRAWRYG 1481
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
Q KP FVYR L+ G++EEK+ RQ K+ +++ V+D + V RH + +L ++ L+++
Sbjct: 1482 QTKPVFVYRLLAYGTMEEKIYNRQLTKEGIAARVLDAHQ-VGRHLNADDLELMYTLDDD 1539
>gi|254582697|ref|XP_002499080.1| ZYRO0E03190p [Zygosaccharomyces rouxii]
gi|238942654|emb|CAR30825.1| ZYRO0E03190p [Zygosaccharomyces rouxii]
Length = 1052
Score = 258 bits (659), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 179/568 (31%), Positives = 285/568 (50%), Gaps = 82/568 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+ ++L +QR V+++YE + G I+ DEMGLGKT+Q I + L L
Sbjct: 276 IYSLLFNYQRTCVQWLYELY-----QQKCGGIIGDEMGLGKTIQVIAFLAALHHSNQLDG 330
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKW-----------LGGRVAA----------------- 234
P++ IV P++++K WC E W +G +A+
Sbjct: 331 PVL----IVCPATVMKQWCTEFHHWWPPFRTVILHSIGAGMASKKKMSEDELEDMIMSGD 386
Query: 235 --------LPIDGGSKAEI--DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEV 284
L +KA++ DN L + + + +L+ +Y R HA L K
Sbjct: 387 PNQFSYGDLENSSKTKAQVESDNLLQTLIDKVAKD--GHVLITTYVGLRIHADKLLKINW 444
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
+ DEGH+++N +S LK R++LSGTPIQN+L E +SL F+ G LGT
Sbjct: 445 AYGILDEGHKIRNPDSDISLTCKKLKTPNRLILSGTPIQNNLTELWSLFDFIFPGKLGTL 504
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
F++Q+ PI G + A++ + + L +++ L+RR A ++K LP K E
Sbjct: 505 PIFQQQFVQPINMGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPEKKEM 564
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI 464
V+ K+T +Q+ Y + S + +KGG+ L I L+K+CNHPDL +D+
Sbjct: 565 VLFCKLTQVQRRKYLEFLHSREL-EDIKGGKR-----RVLYGIDILRKICNHPDL-LDRD 617
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYT 524
+ + ASY K S K+ V+ +L + + K +L +
Sbjct: 618 ERSKE--------------ASYGDPK----RSGKMQVVKQLLLLWR-KEGHKALLFTQSR 658
Query: 525 QTLDLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCG 579
Q LD+ + +L G K++R+DG+ TI R +V+ FN+ + +F+L+++ GG G
Sbjct: 659 QMLDILQEFIAFKDQELTGLKFLRMDGTTTISIRQSLVDEFNR-GDYNVFLLTTRVGGIG 717
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
+NL GANR+++FDPDWNP+ D QA R WR GQK+ +YR + TGSIEEK+ RQ K+
Sbjct: 718 VNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVTGSIEEKIYHRQIFKQ 777
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQL 667
L++ ++ + R F M+EL LF L
Sbjct: 778 FLTNKIL-SDPKQKRFFKMNELHDLFTL 804
>gi|403308077|ref|XP_003944505.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saimiri
boliviensis boliviensis]
Length = 1253
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 175/568 (30%), Positives = 285/568 (50%), Gaps = 67/568 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWLKEFVKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S E V+ DE H++K +++ + A R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLRELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATAGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK-----------------------YLPVKTEQVVCIKMTD 412
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEVQKKTSNPDVKLNENNPDVDAICEMPSLSRKNDLIIWIRLVP 374
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--------I 464
LQ+E+Y + D ++ + + + L+ + LKKLC+HP L+ +
Sbjct: 375 LQEEIYRKFVSLDHIKELLMETQ------SPLAELGVLKKLCDHPRLLSTRACGLLNLRT 428
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLVSN 522
T + EN P S L+E S K++ L + ++K D+ + ++ S
Sbjct: 429 VTFSARDENEGEDSPDMGHIDQISDDTLMEESGKMIFL---MGLLKRLRDEGHQTLVFSQ 485
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLN 581
Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL
Sbjct: 486 SRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQVGGVGLT 545
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 546 LTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSL 605
Query: 642 SSCVVDCEEDVARHFSMSELRSLFQLEE 669
+++ R+FS ELR LF +E+
Sbjct: 606 IRQTTGEKKNPFRYFSKQELRELFTIED 633
>gi|383419435|gb|AFH32931.1| DNA excision repair protein ERCC-6-like [Macaca mulatta]
Length = 1252
Score = 258 bits (659), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGIAFLYRLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQITDNTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|297710314|ref|XP_002831842.1| PREDICTED: excision repair cross-complementing rodent repair
deficiency, complementation group 6-like [Pongo abelii]
Length = 1250
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACG 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|281338942|gb|EFB14526.1| hypothetical protein PANDA_015067 [Ailuropoda melanoleuca]
Length = 1218
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/571 (30%), Positives = 286/571 (50%), Gaps = 72/571 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 72 LHNQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 122
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L+ +++ P++L+ W E KW G RV A G SK E L+ Q G
Sbjct: 123 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKAF--HGPSKDERTRNLSRIQQRNG---- 176
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K +++ + A+ R+L
Sbjct: 177 --VIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRIL 234
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 235 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKIS 294
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 295 ENLMAIIKPYFLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLV 354
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI------- 464
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 355 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACHLLNLG 408
Query: 465 -----QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
GA+ E+A ++ + L+E S K++ L +L ++ +V
Sbjct: 409 SVKFSVQGANEGEDASDV----DHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVF 464
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGC 578
S Q L++ E L K R +K +R+DG++T + +R K + F + + +F+L+++ GG
Sbjct: 465 -SQSRQILNIIEHLLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGV 523
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K
Sbjct: 524 GLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 583
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
+L +++ R+F+ ELR LF +E+
Sbjct: 584 DSLIRQTTGDKKNPFRYFTKQELRELFTIED 614
>gi|109131186|ref|XP_001092609.1| PREDICTED: DNA excision repair protein ERCC-6-like isoform 2
[Macaca mulatta]
Length = 1252
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGIAFLYRLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQITDNTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|402910520|ref|XP_003917922.1| PREDICTED: DNA excision repair protein ERCC-6-like [Papio anubis]
Length = 1256
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 96 LHDQLFEHQKEGIAFLYRLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 146
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 147 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 200
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 201 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 253
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 254 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 313
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 314 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLII 373
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 374 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 427
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 428 LLNLGTFSAQDGNEGEDS-----PDVDHIDQITDNTLMEESGKMIFLMDLLKRLRDEGHQ 482
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 483 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQ 541
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 542 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRR 601
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 602 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 636
>gi|345325793|ref|XP_001505482.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 1292
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/578 (29%), Positives = 289/578 (50%), Gaps = 62/578 (10%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQREGV F+Y + G I+AD+MGLGKT+Q I + G
Sbjct: 93 LHHQLFEHQREGVAFLYSLFR----DGKKGGILADDMGLGKTIQIIAFL-----SGMFDA 143
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
L++ ++V P++L+ W E KW G + G SK E L + G
Sbjct: 144 ELVNYVLLVMPTTLISTWTREFAKWTPG-IRVKNFHGASKTERTKNLERIQRKTG----- 197
Query: 263 PILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
+++ +Y+ ++ S L+ E ++ DE H++K S+T + A R+LL
Sbjct: 198 -VIITTYQMLINNWQQLSSLNGREFVWDYLIFDEAHKIKTSASKTAICARSIPAHNRILL 256
Query: 318 SGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
+GTP+QN+L E +SL QG +LGT+ F+ +YE PI R ++ A+ E+ + E
Sbjct: 257 TGTPVQNNLQELWSLFDVACQGSLLGTSTTFKMEYENPITRAREKDATPGEKALGFKISE 316
Query: 377 QLIGIVNRCLIRRTSALLSKY------------------------LPVKTEQVVCIKMTD 412
L+ I+ +RRT + K L K + ++ +++T
Sbjct: 317 NLMTIIKPHFLRRTKEDVQKRTASQPKSNLSEKSQDDDLAPEMPSLSRKNDFIIWVRLTS 376
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT----GA 468
LQ+++Y + D ++ + T+ + L+ + LKKLC+HP L+ + T
Sbjct: 377 LQEDIYRKFVSLDHIKELLM---ETR---SPLAELGVLKKLCDHPRLLSARACTLLGLEG 430
Query: 469 DGFENAMNILPTGYAASYKSGKL----LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYT 524
GF + Y+ + G+L L+E S KLM L +L ++ +V S
Sbjct: 431 GGFSDQDENGTDHYSDINRIGQLPDQTLMEESGKLMFLMALLKRLQREGHQTLVF-SQSR 489
Query: 525 QTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLI 583
+ LD+ ERL +K +R+DG++ + +R K + F K + +F+L+++ GG GL L
Sbjct: 490 KMLDIIERLLTNTHFKILRVDGTIAQLGEREKRISLFQKNKDYSVFLLTTQVGGVGLTLT 549
Query: 584 GANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSS 643
A R+V+FDP WNPA D QA+ R +R GQK+ +YR ++ G++EEK+ +RQ K +L
Sbjct: 550 AATRVVIFDPSWNPATDAQAVDRAYRIGQKENVVIYRLITCGTVEEKIYRRQVFKDSLVR 609
Query: 644 CVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+FS ELR LF +E+ +S T +++
Sbjct: 610 QTTGDKKNPFRYFSKQELRELFVIEDFRLSKTQQQLQS 647
>gi|355704915|gb|EHH30840.1| DNA excision repair protein ERCC-6-like protein [Macaca mulatta]
Length = 1399
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 239 LHDQLFEHQKEGIAFLYRLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 289
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 290 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 343
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 344 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 396
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 397 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 456
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 457 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLII 516
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 517 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 570
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 571 LLNLGTFSAQDGNEGEDS-----PDVDHIDQITDNTLMEESGKMIFLMDLLKRLRDEGHQ 625
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 626 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQ 684
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 685 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRR 744
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 745 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 779
>gi|410901417|ref|XP_003964192.1| PREDICTED: DNA excision repair protein ERCC-6-like [Takifugu
rubripes]
Length = 1421
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 167/527 (31%), Positives = 269/527 (51%), Gaps = 37/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I+ + L R
Sbjct: 506 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQVISFLAGLSYSKLRTRGSNYRYA 560
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E T W RVA L G + + +G
Sbjct: 561 GLGPTIIVCPATVMHQWVKEFHTWWPPFRVAVLHETGSFTSNKKKLIPEIASCHG----- 615
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R L + V+ DEGH+++N ++ A + R +LSG+P+
Sbjct: 616 -ILITSYSAVRIMQDTLQGWDWHYVILDEGHKIRNPNARVTTACKQFRTPHRFILSGSPM 674
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L +
Sbjct: 675 QNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTI 734
Query: 383 NRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR A + LP K EQV+ K+T+ Q+++Y + + S V + + G
Sbjct: 735 NPYLLRRMKADVKANLSLPDKNEQVLFCKLTEEQRQVYQSFLDSKEVYQILNGD------ 788
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + +P + + S KL+
Sbjct: 789 MQVFSGLIALRKICNHPDLF--------SGGPRLLRGIPEDQLTEEEHFGFW-KRSGKLI 839
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L + +++L + Q L++ E + Y YV++DG+ I R ++ +
Sbjct: 840 VVESLLRLW-FRQGQRVLLFTQSRQMLNILEVFVRENKYSYVKMDGTTPISSRQPLIACY 898
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ + FIF+L++K GG G+NL GANR++++DPDWNP+ D QA R WR GQK+ +YR
Sbjct: 899 NEDKSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKQQVTIYR 958
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F +++ LF L
Sbjct: 959 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDIYELFTL 1004
>gi|301780254|ref|XP_002925544.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ailuropoda
melanoleuca]
Length = 1240
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 176/578 (30%), Positives = 288/578 (49%), Gaps = 72/578 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L+ +++ P++L+ W E KW G RV A G SK E L+ Q G
Sbjct: 143 TLVSHVLLIMPTNLISTWIKEFVKWTPGMRVKAF--HGPSKDERTRNLSRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K +++ + A+ R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSAICARAVPARNRIL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEVQKKKASTPEVRLGEKNPDVDAICEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI------- 464
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACHLLNLG 428
Query: 465 -----QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVL 519
GA+ E+A ++ + L+E S K++ L +L ++ +V
Sbjct: 429 SVKFSVQGANEGEDASDV----DHIDQITDDTLMEESGKMIFLIELLKRLRDEGHQTLVF 484
Query: 520 VSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGC 578
S Q L++ E L K R +K +R+DG++T + +R K + F + + +F+L+++ GG
Sbjct: 485 -SQSRQILNIIEHLLKNRHFKILRIDGTVTHLVEREKRINLFQQNKDYSVFLLTTQVGGV 543
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K
Sbjct: 544 GLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFK 603
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
+L +++ R+F+ ELR LF +E+ S T
Sbjct: 604 DSLIRQTTGDKKNPFRYFTKQELRELFTIEDFQNSATQ 641
>gi|355757463|gb|EHH60988.1| DNA excision repair protein ERCC-6-like protein [Macaca
fascicularis]
Length = 1252
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGIAFLYRLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQITDNTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKQNVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|115482344|ref|NP_001064765.1| Os10g0457700 [Oryza sativa Japonica Group]
gi|113639374|dbj|BAF26679.1| Os10g0457700, partial [Oryza sativa Japonica Group]
Length = 1319
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 193/640 (30%), Positives = 316/640 (49%), Gaps = 99/640 (15%)
Query: 111 ALVLYTPPQLSAH----DLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE----CV 162
+ L P ++S + ++ + +++ + V + +S L+PHQ G++FM+E V
Sbjct: 675 GISLEAPSEVSEYVGDGHIVNLAREEDEAPVRIPSSISAKLKPHQVSGIRFMWENVIQSV 734
Query: 163 TGVRIED-AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWC 221
V+ D +GCI+A MGLGKT Q IT ++T++R L + A+IV P +++ NW
Sbjct: 735 KKVKSGDKGFGCILAHNMGLGKTFQVITFLYTVMRCIQLG---LRTALIVTPVNVLHNWK 791
Query: 222 NEITKWLGGRVAALPI---DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA-- 276
E KW L + + +A I L + R +L+I Y +FR+ +
Sbjct: 792 KEFIKWCPAESKPLRVYMLEDVPRANIQYLLKKW------RIKGGVLLIGYSSFRNLSLG 845
Query: 277 -SVLHK---NEV--------GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
S K NE+ +++CDE H +KN + T QAL ++ +RR+ L+G+P+QN
Sbjct: 846 RSARDKTVANEITNALQCGPDILVCDEAHIIKNRRADTTQALKQVRTQRRIALTGSPLQN 905
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER----LEQLIG 380
+L+EY+ +V FV +G LG++ EFR +++ PI GQ + ++ + N+R EQL G
Sbjct: 906 NLMEYYCMVDFVREGYLGSSHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILYEQLKG 965
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
V R + ++ LP K VV +K++ LQ++LY + + + E +
Sbjct: 966 FVQRMDMN----VVKNDLPEKKVFVVTVKLSQLQRKLYRRFLDVNGFSSSA-ASEKSFQR 1020
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTG------ADGF--------ENAMNILPTGY---- 482
+ +L + NHP L+ Q G + F +N N LP G
Sbjct: 1021 SGFFAKYQTLALIWNHPGLLQMAKQKGNLRQEDVESFLMDESSSDDNIENYLPNGEKLRS 1080
Query: 483 ---AASYKSGKLLIE------------------LSAKLMVLDTMLAVIKMTTDDKIVLVS 521
S KS ++ E S K+++L +L+ DK ++ S
Sbjct: 1081 RNDQLSKKSSDVVNEESNWWENLLDENAYKEADYSGKMVLLLDILSSCS-ELGDKALVFS 1139
Query: 522 NYTQTLDLFE-RLSKL-----------RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFI- 568
TLDL E LSKL +G + R+DGS +R +VE FN N +
Sbjct: 1140 QSLSTLDLVEFYLSKLQVNGKEGKYWKQGKDWYRIDGSTPSSERQNLVERFNDPENIRVK 1199
Query: 569 -FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSI 627
++S++AG G+NL ANR+++ D WNP +D QA+ RVWR GQ KP + YR ++ ++
Sbjct: 1200 CTLISTRAGYIGINLHSANRVILLDGSWNPTHDLQAIYRVWRYGQTKPVYAYRLMAHATM 1259
Query: 628 EEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
EEK+ +RQ K+ L++ VVD + V+R S E+ LF+
Sbjct: 1260 EEKIYKRQVTKEGLAARVVD-RQQVSRTISKEEMLHLFEF 1298
>gi|322694140|gb|EFY85978.1| DNA repair protein Rhp26/Rad26, putative [Metarhizium acridum CQMa
102]
Length = 1162
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 275/533 (51%), Gaps = 51/533 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV+++ E + G I+ DEMGLGKT+Q I + L L +P+I
Sbjct: 398 YQKTGVQWLAELY-----KQNVGGIIGDEMGLGKTVQLIAFIAALHHSKMLERPVI---- 448
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS------KAEID--------NKLNSFMQ 254
+VAP++L++ W +E +W RV+ L G + E D N+ + +
Sbjct: 449 VVAPATLLRQWVSEFHRWWPPLRVSILHSSGSGMMNPRFEDEYDVEHYRPVANRSLNAAR 508
Query: 255 TYGRRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
RR V+ +LV +Y +++A L E G + DEGH+++N ++ L
Sbjct: 509 RIVRRVVDKGHVLVTTYTGLQTYADELLPVEWGYAVLDEGHKIRNPNAEITVTCKELNTP 568
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI +G + AS+ + A
Sbjct: 569 NRVILSGTPVQNNLTELWSLFDFIYPMRLGTLVNFRTQFEIPIRQGGYANASNLQVMTAE 628
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ E L + L++R ++ LP KTEQV+ K+T+ Q++ Y + SD V +
Sbjct: 629 KCAEALKETIGEYLLQRLKIDVAADLPEKTEQVLFCKLTEGQRKAYETFLGSDEVSAILN 688
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
+ G I L+K+CNHPDL +DK G Y G
Sbjct: 689 RRRQSLYG------IDILRKICNHPDL-LDK---------------SLGSKIGYNFGS-- 724
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+LSAKL + +L + + K +L S L++ E+ + Y+RLDG + +
Sbjct: 725 PKLSAKLELTKDLLQKVMIPKGHKTLLFSQGKLMLNIIEKCMRECNISYLRLDGETPVDQ 784
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +++ FN + +F+++++ GG G NL GA+R+++FDPDWNP+ D QA R WR GQ
Sbjct: 785 RQPMIDRFNADLSIHVFLMTTRTGGLGTNLTGADRIIIFDPDWNPSTDLQARERAWRLGQ 844
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
KP +YR ++ G+IEEK+ RQ K+ +++ V+ + + + +S+L LF
Sbjct: 845 NKPVKIYRLMTEGTIEEKIYHRQIFKQFMTNKVLKDPKQRS-SYDLSDLYDLF 896
>gi|303276396|ref|XP_003057492.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545]
gi|226461844|gb|EEH59137.1| ran-binding dexh-box helicase [Micromonas pusilla CCMP1545]
Length = 1514
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 266/528 (50%), Gaps = 44/528 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQ+ +K+++E + + A G ++ DEMGLGKT+Q + L R G L +
Sbjct: 647 HQKTSIKWLWE----IHCQRA-GGVVGDEMGLGKTVQVAAFLCALERSG-----LYQPTL 696
Query: 210 IVAPSSLVKNWCNEITKWL-----GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP- 263
IV P+++++ W E+ W G + A +K + R +P
Sbjct: 697 IVCPATMLRQWRRELRAWAPKLNCGILHESAVSAASRAAARGSKKQARCNIIRERVRDPK 756
Query: 264 -ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+L+ +YE R L G + DEGH+++N ++ L+ R++++G PI
Sbjct: 757 GVLLTTYEHLRVMRDHLLPVRWGYAILDEGHKIRNPDADVTICAKQLQTVHRLVMTGAPI 816
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN L E +SL F G LGT F+ Q+ PI G S AS + T A L ++
Sbjct: 817 QNRLAELWSLFDFCFPGKLGTLPVFQAQFAVPIQVGGYSNASQQQVTTAYRCASMLKELI 876
Query: 383 NRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT 442
+ L+RR A + LP KTEQV+ MT Q+E Y + S V ++G
Sbjct: 877 SPYLLRRMKADVDIQLPTKTEQVLFCPMTQEQREAYRAYVHSRDVEEILEGRRE------ 930
Query: 443 ALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVL 502
AL I L+K+ NHPDL+ + + AA K G+ +E S K +V
Sbjct: 931 ALGGIDVLRKIVNHPDLLERRTK-----------------AAHEKYGE--VERSGKQLVT 971
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
+L + K +++L S Q LD+ E + GY Y R+DG+ + +R +++ FN
Sbjct: 972 QKVLELWK-EQGHRVLLFSQTQQMLDILEAMVAKAGYPYRRMDGATPVSQRMTLIDEFNT 1030
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
+N F+F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQ + VYR +
Sbjct: 1031 DANVFVFLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQTREVTVYRLV 1090
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
+ G+IEEK+ RQ +K+ L+S V+ + R F +L LF EE+
Sbjct: 1091 TAGTIEEKVYHRQIYKEFLTSKVLK-DPKQRRFFKAKDLADLFTWEED 1137
>gi|426396380|ref|XP_004064422.1| PREDICTED: DNA excision repair protein ERCC-6-like [Gorilla gorilla
gorilla]
Length = 1249
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|345327989|ref|XP_001508174.2| PREDICTED: DNA excision repair protein ERCC-6 [Ornithorhynchus
anatinus]
Length = 882
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 168/526 (31%), Positives = 271/526 (51%), Gaps = 35/526 (6%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 118 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFK 172
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP 263
+ +IV P++++ W E W A+ D GS + K+ + G
Sbjct: 173 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYT--NKKVKLIHEIAG---CQG 227
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
IL+ SY R ++ + V+ DEGH+++N + A + R++LSG+P+Q
Sbjct: 228 ILITSYSYIRLMQDNINNYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQ 287
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
N+L E +SL FV G LGT F +Q+ PI G S AS + A + L +N
Sbjct: 288 NNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTIN 347
Query: 384 RCLIRRTSA--LLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
L+RR A +S LP K EQV+ ++T Q+E+Y N I S V + G M
Sbjct: 348 PYLLRRMKADVKMSLSLPDKNEQVLFCRLTAEQREVYQNFIDSKEVYSILSGE------M 401
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
+ +L+K+CNHPDL + G + N+ + G + S K++V
Sbjct: 402 QIFPGLMALRKMCNHPDLF-------SGGPKILKNVPDDELEEEDQFG--YWKRSGKMIV 452
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
++++L I +++L S Q L + E + + Y Y+++DG+ TI R ++ +N
Sbjct: 453 VESLLK-IWHKQGHRVLLFSQSRQMLHILEVFLRGQKYSYLKMDGTTTIASRQPLITRYN 511
Query: 562 KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRF 621
+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQK+ VYR
Sbjct: 512 EDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKRQVTVYRL 571
Query: 622 LSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 572 LTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 616
>gi|449666890|ref|XP_002155441.2| PREDICTED: DNA excision repair protein ERCC-6-like, partial [Hydra
magnipapillata]
Length = 1025
Score = 257 bits (657), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 276/535 (51%), Gaps = 41/535 (7%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +QR GV+++++ G I+ DEMGLGKT+Q I+ + L+
Sbjct: 262 LWNKLYKYQRVGVRWLWQLHA-----QEVGGIVGDEMGLGKTIQVISFLAGLVYSKKGNN 316
Query: 203 PL-----IDKAIIVAPSSLVKNWCNEITKWL-GGRVAALPIDGGSKAEIDNKLNSFMQTY 256
+ +IV P++++ W +E W RVA L G I + L + ++
Sbjct: 317 INNNKFGLGSVLIVCPATVMFQWVSEFHMWWPHFRVAILHSSG---TFIGSPL-TLIRAI 372
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ P IL+ +Y + +H L+K+ V+ DEGH+++N ++ A R++
Sbjct: 373 SKHP--GILITTYNSVLNHKKELYKHNWQYVILDEGHKIRNPDALITLACKQFNTSHRLI 430
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
L+GTP+QN L E +SL FV G LGT F ++ PI G + AS + A +
Sbjct: 431 LTGTPMQNSLKELWSLFDFVYPGRLGTLPVFMAEFSIPITMGGYANASSLQVQAAYKCCC 490
Query: 377 QLIGIVNRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L + +IRR + + +LP K+EQ++ K+T+ QK +Y I S V + G
Sbjct: 491 ILKDTITPYMIRRMKKDVQQTLFLPTKSEQILFCKLTEEQKAIYKEFISSRDVASILNGD 550
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL--L 492
M + L+K+CNHPDLV A+ + G AS
Sbjct: 551 ------MKIFPGLIKLRKICNHPDLV----SLAAE--------VEKGKPASLDDASCYGF 592
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+ S K++V++ +L + K +++L + Q LD+ E K + Y+R+DG+ ++K
Sbjct: 593 WKRSGKMIVVENLLRMWKHQ-GHRVLLFTQSKQMLDILEGFLKAAEHSYMRMDGTTSVKS 651
Query: 553 RAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
R +V+ F+++ N F+F+L+++ GG GLNLI ANR++++DPDWNP+ D QA R WR GQ
Sbjct: 652 RHGIVKKFHESKNIFVFLLTTRVGGLGLNLIAANRVIIYDPDWNPSVDSQARERSWRIGQ 711
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
K +YR L+TG+IEEK+ RQ K+ L++ V+ R F ++L LF L
Sbjct: 712 LKDVTIYRLLTTGTIEEKIYHRQIFKQFLTNRVL-TNPYQRRFFKNNDLHELFTL 765
>gi|156523172|ref|NP_001096000.1| DNA excision repair protein ERCC-6-like [Bos taurus]
gi|182645386|sp|A6QQR4.1|ERC6L_BOVIN RecName: Full=DNA excision repair protein ERCC-6-like; AltName:
Full=ATP-dependent helicase ERCC6-like
gi|151554062|gb|AAI49964.1| ERCC6L protein [Bos taurus]
gi|296470840|tpg|DAA12955.1| TPA: DNA excision repair protein ERCC-6-like [Bos taurus]
Length = 1242
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 287/569 (50%), Gaps = 68/569 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +Q+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLYEYQKEGIAFLYSLYRDGR----RGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P+SL+ W E KW G RV G SK E L Q G
Sbjct: 143 SLVNHVLLIMPTSLISTWLREFVKWTPGMRVKTF--HGPSKDERTRNLCRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K+ +++ + A R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKSSSTKSAICARAIPASNRIL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACGLLNLG 428
Query: 468 ADGFENAMNILPTGYAAS------YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
A F I G +S S L+E S K++ L +L ++ +V S
Sbjct: 429 AAKFSVQDEI--EGEDSSDVDHIDQISDDTLMEESGKMLFLMDLLKKLRDEGHQTLVF-S 485
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
+ L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL
Sbjct: 486 QSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGL 545
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
L A+R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +
Sbjct: 546 TLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 605
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEE 669
L +++ R+FS ELR LF +E+
Sbjct: 606 LIRQTTGDKKNPFRYFSKQELRELFTIED 634
>gi|194206164|ref|XP_001500332.2| PREDICTED: DNA excision repair protein ERCC-6 [Equus caballus]
Length = 1461
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 165/527 (31%), Positives = 267/527 (50%), Gaps = 61/527 (11%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 502 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 556
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + +G
Sbjct: 557 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAVLHETGSCTHRKEKLIRDIAHCHG----- 611
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + +++ V+ DEGH+++N + A + R++LSG+P+
Sbjct: 612 -ILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 670
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G + AS + A + L +
Sbjct: 671 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYANASPVQVKTAYKCACVLRDTI 730
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N I S V + G
Sbjct: 731 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFIDSKEVYGILNG------D 784
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHP GY + S K++
Sbjct: 785 MQVFSGLVALRKICNHP-----------------------GY----------WKRSGKMI 811
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ T+ R ++ +
Sbjct: 812 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTVASRQPLITRY 870
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 871 NEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 930
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 931 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 976
>gi|395855223|ref|XP_003800069.1| PREDICTED: DNA excision repair protein ERCC-6-like [Otolemur
garnettii]
Length = 1253
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 174/567 (30%), Positives = 282/567 (49%), Gaps = 64/567 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E +W G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIIPTNLINTWVKEFVEWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----TFRSHASVLHKNEV-GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ +R +S + V V+ DE H++K +++ + A R+L
Sbjct: 197 --VIITTYQMLINNWRQLSSFNGQEFVWDYVILDEAHKIKTSSTKSAICARAIPAINRLL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R + A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRARQKDATPGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEIQKKKSSNLEVRISEKNPDVGATCEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACQLLNLG 428
Query: 468 ADGFE----NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
F N P + + L+E S K++ L +L ++ +V S
Sbjct: 429 TVKFSALDGNEGEDFPDMDHIDQITDETLMEESGKMIFLMDLLKRLRDEGHQTLVF-SQS 487
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
Q L++ E L K R +K +R+DG++T + +R K + F K + +F+L+++ GG GL L
Sbjct: 488 RQILNIIEHLLKNRHFKTLRIDGTITHLLEREKRINLFQKNKDYSVFLLTTQVGGVGLTL 547
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 548 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 607
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEE 669
+++ R+FS ELR LF +E+
Sbjct: 608 RQTTGEKKNPFRYFSKQELRELFTIED 634
>gi|384254120|gb|EIE27594.1| hypothetical protein COCSUDRAFT_34894 [Coccomyxa subellipsoidea
C-169]
Length = 735
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 168/523 (32%), Positives = 262/523 (50%), Gaps = 37/523 (7%)
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPI 237
MGLGKT+Q + L G +P +IIV P+++++ W E+ W RV L
Sbjct: 1 MGLGKTVQLAVFLAGLHHSGRF-RP----SIIVCPATVLRQWLRELRLWYPPFRVIVLHE 55
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
S +Q IL+ SY+ R S L G + DEGH+++N
Sbjct: 56 SQRSGNAPRPSRQKLVQLVKNSQAG-ILLTSYDQLRLQRSELLAVNWGYAILDEGHKIRN 114
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
+++ L R+++SG+PIQN L E +SL FV G LGT FR Q+ PI
Sbjct: 115 PDAEITLVAKQLATVHRIIMSGSPIQNHLTELWSLFDFVFPGKLGTLPVFRAQFALPIQI 174
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
G + AS + + A + L ++ L+RR A +++ LP KTEQV+ +T Q++L
Sbjct: 175 GGYANASAMQVSTAFKCAVVLRDLIAPYLLRRRKADVAQQLPKKTEQVLFCSLTTDQRDL 234
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
Y + + SD V+ + N AL+ I L+K+CNHPDL+ + +
Sbjct: 235 YRSYLASDEVQDILNDRRN------ALAGIDILRKICNHPDLLQRRQWESTEK------- 281
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
Y +SGKL++ L VL K + + Q LD+ ER +
Sbjct: 282 ----YGDPVRSGKLVVALK----VLQHW-----KQQGHKALFFTQTQQMLDIVERAVQAA 328
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
G++Y R+DGS + RA++V+ FN F+F+L++K GG G+NL GA+R++++DPDWNP
Sbjct: 329 GFRYHRMDGSTAVGARARLVDDFNGNEQVFVFLLTTKVGGLGINLTGADRVLLYDPDWNP 388
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFS 657
+ D QA R WR GQK+ +YR +++G+IEEK+ RQ +K+ L+ V+ + R F
Sbjct: 389 STDMQARERAWRIGQKREVTIYRLITSGTIEEKVYHRQIYKQFLTEKVLQ-DPKQKRFFK 447
Query: 658 MSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCT 700
++ LF L + + S G++V PL+ D
Sbjct: 448 SKDIHDLFTLGDQYAGASETAHIFSSLHGGLEV---PLDPDSV 487
>gi|348536122|ref|XP_003455546.1| PREDICTED: DNA excision repair protein ERCC-6-like [Oreochromis
niloticus]
Length = 1270
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 167/584 (28%), Positives = 292/584 (50%), Gaps = 69/584 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L +QR+GV F+Y R G I+AD+MGLGKT+Q I+ + G
Sbjct: 104 LYDKLYDYQRDGVAFLYSLYRDGR----KGGILADDMGLGKTIQVISFL-----SGMYDN 154
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L +++ P+SL+ NW E +KW G RV G SK E L + G
Sbjct: 155 ELAKHTLLIMPTSLITNWTKEFSKWTPGMRVKEFH--GISKGERTRNLEKVQRRGG---- 208
Query: 262 NPILVISYETFRSHASVLHKNEV-----GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y ++ L + ++ DE H++K+ ++T ++ + +K RVL
Sbjct: 209 --VIITTYTMLLNNWQQLSTHNGKEFTWDYMILDEAHKIKSTTTKTAKSAYAIPSKNRVL 266
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTP+QN+L E ++L F QG +LGTA+ F+ +YE I R ++ A+ E+ +
Sbjct: 267 LTGTPVQNNLREMWALFDFACQGTLLGTAKTFKAEYENSITRAREKDATPGEKALGSRMS 326
Query: 376 EQLIGIVNRCLIRRTSALLSKY-------------------------------LPVKTEQ 404
E L+ I+ +RRT + + K L K +
Sbjct: 327 ENLMAIIKPYFLRRTKSEVQKNKTNRTHNKEHLEDKEDHVPNLEADSGAVMPKLTRKNDL 386
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK- 463
+V ++ +Q+++Y I D +R + + L+ + LKKLC+HP L+
Sbjct: 387 IVWTYLSAIQEDIYRQFISLDHIRELL------LTTRSPLAELNILKKLCDHPRLLSAAA 440
Query: 464 -----IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
++ A + + P+ ++ + LI S K++ L ++L ++ +V
Sbjct: 441 IAKLGLEESAAECQETTDTEPSDHSITSVPDDTLISESGKMVFLFSLLERLRQEGHRTLV 500
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGG 577
++Y + LD+ ER+ RG+K +RLDG++T I +R +++ F +F+L+++ GG
Sbjct: 501 F-AHYRKVLDIIERILSNRGFKVLRLDGTITQITERERLISLFQTDKRYSVFLLTTQVGG 559
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
G+ L ANR+V++DP WNPA D QA+ R +R GQ + +YR ++ G++EEK+ +RQ
Sbjct: 560 VGITLTAANRVVIYDPSWNPATDAQAVDRAYRIGQTENVVIYRLITCGTVEEKIYRRQVF 619
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K +L +++ R+FS EL+ LF LE+ S T +++
Sbjct: 620 KDSLIRQNTGDKKNPFRYFSKQELKELFTLEDTRSSSTQLQLQA 663
>gi|255720394|ref|XP_002556477.1| KLTH0H14300p [Lachancea thermotolerans]
gi|238942443|emb|CAR30615.1| KLTH0H14300p [Lachancea thermotolerans CBS 6340]
Length = 1037
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 174/559 (31%), Positives = 278/559 (49%), Gaps = 78/559 (13%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ V+++YE + G I+ DEMGLGKT+Q I + +L G L P++
Sbjct: 272 YQKTCVQWLYELY-----QQQCGGIIGDEMGLGKTIQIIAFLASLHHSGKLNGPIL---- 322
Query: 210 IVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDN----KLNS-FMQ--------- 254
+V P+++++ WC E T W R L G + +N KL FM
Sbjct: 323 VVCPATVLRQWCKEFHTWWPPFRAIILHSIGAGMTQKENLSEQKLEELFMNSNPEEFSFD 382
Query: 255 --TYGRRP-------------VNPI------LVISYETFRSHASVLHKNEVGLVLCDEGH 293
T +R +N + L+ +Y R H+ L G + DEGH
Sbjct: 383 AYTNSKRTKSILESSLTRDNLINKVVTDGHVLITTYVGLRIHSDKLLNVRWGYAVLDEGH 442
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
+++N ++ LK K R++LSGTPIQN+L E +SL F+ G LGT F++Q+
Sbjct: 443 KIRNPDADISLTCKQLKTKNRIILSGTPIQNNLTELWSLFDFIFPGRLGTLPVFQQQFSV 502
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
PI G + A++ + + L +++ L+RR A ++K LP K E V+ K+T
Sbjct: 503 PINMGGYANATNIQVQTGYKCAVALRNLISPYLLRRIKADVAKDLPRKNEMVLFCKLTQY 562
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q+ Y + S+ + + G G I L+K+CNHPDL+ + + D
Sbjct: 563 QRNKYLQFLNSEDLVKIKNGKRQVLFG------IDILRKICNHPDLLEREQRQNED---- 612
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
Y +SG K+ V+ +L + + K +L + Q LD+ ER
Sbjct: 613 -------SYGDPKRSG--------KMQVVKQLLKLWH-SQGHKTLLFTQSRQMLDILERF 656
Query: 534 -----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRL 588
+L Y+R+DG+ +I R +V++FN S + +F+L+++ GG G+NL GANR+
Sbjct: 657 ISYKDPELEELTYLRMDGTTSIGARQALVDSFNNGSYD-VFLLTTRVGGLGVNLTGANRI 715
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
++FDPDWNP+ D QA R WR GQ++ +YR + GSIEEK+ RQ K+ L++ ++
Sbjct: 716 IIFDPDWNPSTDMQARERAWRIGQRREVTIYRLMIAGSIEEKIYHRQIFKQFLTNKIL-T 774
Query: 649 EEDVARHFSMSELRSLFQL 667
+ R F M+EL+ LF L
Sbjct: 775 DPKQKRFFKMNELQDLFTL 793
>gi|296235754|ref|XP_002763033.1| PREDICTED: DNA excision repair protein ERCC-6-like, partial
[Callithrix jacchus]
Length = 1229
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 176/573 (30%), Positives = 285/573 (49%), Gaps = 77/573 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 68 LHDQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 118
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 119 SLVNHVLLIMPTNLMNTWLKEFVKWTPGMRVKTF--HGPSKDERTRNLNWIQQRNG---- 172
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S E V+ DE H++K +++ + A R+L
Sbjct: 173 --VIITTYQMLINNWQQLSSFRGQEFLWDYVILDEAHKIKTSSTKSAICARAVPASNRLL 230
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + FR +YE PI R ++ A+ E+ +
Sbjct: 231 LTGTPIQNNLRELWSLFDFACQGSLLGTLKTFRMEYENPITRAREKDATPGEKALGFKIS 290
Query: 376 EQLIGIVNRCLIRRTSALLSK-----------------------YLPVKTEQVVCIKMTD 412
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 291 ENLMAIIKPYFLRRTKEEVQKKTSNPDVKLNEKNPDVDAICEMPSLSRKNDLIIWIRLVP 350
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL------------- 459
LQ+E+Y + D ++ + + L+ + LKKLC+HP L
Sbjct: 351 LQEEIYRKFVSLDHIKELLMETR------SPLAELGILKKLCDHPRLLSARACGLLNLGT 404
Query: 460 VMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KI 517
V Q G +G ++ P + L+E S K++ L + ++K D+ +
Sbjct: 405 VTFSAQDGNEGEDS-----PDMDHIDQITDDTLMEESGKMIFL---MGLLKRLRDEGHQT 456
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAG 576
++ S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ G
Sbjct: 457 LVFSQSRQILNIIERLLKNRHFKILRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQVG 516
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ
Sbjct: 517 GVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQV 576
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
K +L +++ R+FS ELR LF +E+
Sbjct: 577 FKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 609
>gi|332263741|ref|XP_003280911.1| PREDICTED: DNA excision repair protein ERCC-6-like [Nomascus
leucogenys]
Length = 1250
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/575 (30%), Positives = 282/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHDQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWIKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEVRLNEKNPDIDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLRTFSAQDGNEGEDS-----PDVDHIDQITDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + + ML+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVLMLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>gi|334332813|ref|XP_001368542.2| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Monodelphis domestica]
Length = 1204
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 194/678 (28%), Positives = 321/678 (47%), Gaps = 98/678 (14%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ + ++ LR +QREG +F+Y + R GCI+ D+MGLGKT+Q I + +LR
Sbjct: 126 ICIPYTINRYLRDYQREGAQFLYGHYSLGR-----GCILGDDMGLGKTVQVIAFLAAVLR 180
Query: 197 QGPLAKPLIDKA---------------------IIVAPSSLVKNWCNEITKWLGGRVAAL 235
+ K + + +IVAP S++ NW +E+ W G
Sbjct: 181 KKGTRKDIENNMPEFLLKNKKKESSISAPKKMFLIVAPLSVLYNWKDELNTW--GYFKVT 238
Query: 236 PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
+ G K DN+LN Q I + +YET R L+ E ++ DE HR+
Sbjct: 239 ILHGNKK---DNELNRIKQGKCE-----IALTTYETLRLCLDDLNSIEWSAIIVDEAHRI 290
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
KN +++ + + LK R+ L+GT +QN++ E + ++ + G+LG+ F+KQ+ P+
Sbjct: 291 KNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAMPGLLGSMTYFKKQFSDPV 350
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
GQ A+ E + +++L ++ +RRT L+ LP K +++V +T+ QK
Sbjct: 351 EHGQRHTATKRELATGRKAMQRLARKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTEFQK 410
Query: 416 ELYTNLIKSDAVRRTMKGGE----------------NTKLGMTA----LSSITSLKKLCN 455
+Y +++++ V ++ E G T S + L+K+ N
Sbjct: 411 AVYQTVLETEDVTLILRAREPCTCHSGRKRKNCCYKTNSYGETVKALYFSYLAILQKVSN 470
Query: 456 HPDLVMDKIQTGADG-----------FENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
H L+ T F + + A++++ + S K+ VL
Sbjct: 471 HAALLQASSNTSKQQETHLKRICNQVFSKFKDFMQKSKDAAFETISD-PKYSGKMKVLQQ 529
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
+L K D K++L S T+ LD+ E+ G Y RLDGS ++R K+V+ FN T
Sbjct: 530 LLNHCKKNRD-KVLLFSFSTKLLDVLEQYCMATGLDYRRLDGSTKSEERVKIVKEFNSTQ 588
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+ I ++S+ AGG GLN +GAN +V+FDP WNPAND QA+ R +R GQ + V+R +S
Sbjct: 589 DINICLVSTMAGGLGLNFVGANVVVIFDPTWNPANDLQAIDRAYRIGQCRDVKVFRLISL 648
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSE-----------LRSLFQLEENTIS 673
G++EE M RQ +K+ L CVV E+ R+F + + +LF+L
Sbjct: 649 GTVEEIMYLRQVYKQQL-HCVVVGSENAKRYFEAVQGSKEHQGELFGIHNLFKLRSQGSC 707
Query: 674 DTHDKIKCSRCVNG--------IQVKPPPLESDCTDDLSCWHHVTEKRWLVDPILKH--- 722
T D ++ V ++ PP + + T+DL C H +K+ D +L+
Sbjct: 708 LTRDILEREGQVEAGVMTATTWLKEGPPTHKLEMTEDLECQEH--KKQGQSDEVLEKEAF 765
Query: 723 --CWGAGVSFVFYQHSTK 738
C+ GV V Y HS +
Sbjct: 766 DLCY--GVQEVAYIHSNQ 781
>gi|242002592|ref|XP_002435939.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
gi|215499275|gb|EEC08769.1| DNA excision repair protein ERCC-6, putative [Ixodes scapularis]
Length = 982
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 284/561 (50%), Gaps = 57/561 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL----LRQGPLAKPLI 205
+Q+ GV++++E G I+ DEMGLGKT+Q I L LR + +
Sbjct: 2 YQQTGVRWLWEL-----HRQNTGGIVGDEMGLGKTIQTIAFFAGLHHSNLRTLGDSFQGL 56
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN--- 262
+++ P++++ W E +W A+ D GS A L R VN
Sbjct: 57 GPVVLICPTTVMHQWVREFHRWYPPVRVAILHDSGSFAGSKETLV--------RQVNRDR 108
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+LV SY + +L ++E V+ DEGH+++N ++QT A + R++LSG+PI
Sbjct: 109 GVLVTSYAGVSKLSPMLLRHEWHYVVLDEGHKIRNPDAQTTLACKQFRTTHRIILSGSPI 168
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL FV G LGT F +++ PI +G S A+D + A + L +
Sbjct: 169 QNNLRELWSLFDFVFPGKLGTLPVFMQEFAVPITQGGYSNATDVQ--TAYKCASVLRDTI 226
Query: 383 NRCLIRRT--SALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
L+RR + LP K EQV+ ++TD Q++LY + + + + G +G
Sbjct: 227 KPYLLRRMKDDVQCNLQLPKKNEQVLFCRLTDHQRDLYRQYLDTPEIASILVGRLQVFVG 286
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENA-MNILPTGYAASYKSGKLLIELSAKL 499
+ +L+K+CNHPDL G F++ ++ LP + S K+
Sbjct: 287 LI------NLRKICNHPDL----FDGGPKVFKDTDLSTLPAEMRYGFPG------RSGKM 330
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
V++++L + K +++L + Q L + E+ + +GYKY+ + GS I R +
Sbjct: 331 AVVESLLKLWKRQ-GHRVLLFTQSRQMLLILEKFVQDQGYKYMVMTGSTPIASRQPAINK 389
Query: 560 FNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
FN ++ F+F+L+++ GG G+NL GA+R+V++DPDWNP+ D QA R WR GQ + +Y
Sbjct: 390 FNADTSVFVFLLTTRVGGLGVNLTGADRVVIYDPDWNPSTDTQARERAWRIGQLRDVTIY 449
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN--------- 670
R L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L ++
Sbjct: 450 RLLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKTNDLHELFCLADDAKQKRTETS 508
Query: 671 -----TISDTHDKIKCSRCVN 686
T SD K+K SR N
Sbjct: 509 AIFAGTGSDVKPKVKESRTKN 529
>gi|156344365|ref|XP_001621159.1| hypothetical protein NEMVEDRAFT_v1g145813 [Nematostella vectensis]
gi|156206838|gb|EDO29059.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/217 (60%), Positives = 157/217 (72%), Gaps = 8/217 (3%)
Query: 402 TEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS---ITSLKKLCNHPD 458
EQVVC ++T LQ +Y LI S A++ + G K G + SS ITSLKKLCNHP+
Sbjct: 5 VEQVVCCRLTPLQTAIYKRLIHSKALKIKLAEGSKGKPGGVSTSSLGFITSLKKLCNHPE 64
Query: 459 LVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
L+ +K Q +GFE + P + + ELS K+ VLD +LAV K T+DDK+V
Sbjct: 65 LIYEKAQMEDEGFEGVREMFPQKFDLK----NVQPELSGKMQVLDYILAVTKATSDDKVV 120
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGG 577
LVSNYTQTLDLFE+L + R Y++VRLDGSM+IKKR K+V+ FN +FIFMLSSKAGG
Sbjct: 121 LVSNYTQTLDLFEKLCRQRRYQHVRLDGSMSIKKRQKIVDRFNDPKGGDFIFMLSSKAGG 180
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK
Sbjct: 181 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 217
>gi|344281916|ref|XP_003412722.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Loxodonta africana]
Length = 1280
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 173/572 (30%), Positives = 287/572 (50%), Gaps = 74/572 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 140 LHNQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 190
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV A G SK E L+ Q G
Sbjct: 191 ALVNHVLLIMPTNLISTWVKEFVKWTPGMRVKAF--HGPSKDERTRNLSRIQQRNG---- 244
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K +++ + AK R+L
Sbjct: 245 --VIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKTSSTKSATCARAIPAKNRIL 302
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ QYE PI++ ++ A+ E+ +
Sbjct: 303 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMQYENPIIKAREKDATPGEKALGFKIS 362
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + + L K + ++ I++
Sbjct: 363 ENLMAIIKPYFLRRTKEEVQEKKLSNPEIRHSKKNPDVDAICEMPSLSRKNDLIIWIRLV 422
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI------- 464
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 423 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACCLLNLK 476
Query: 465 ------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
Q +G E + ++ G+ L+ E S K++ L +L ++ +V
Sbjct: 477 GSKFSSQNENEG-EGSSDV---GHIDQVTDATLINE-SGKMIFLMELLKRLRDEGHQTLV 531
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGG 577
S Q L+ E + K R +K +R+DG++T + +R K + F + + +F+L+++ GG
Sbjct: 532 F-SQSRQILNFIEHVLKNRHFKTLRIDGTITHLLEREKRINLFQQNKDYSVFLLTTQVGG 590
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ
Sbjct: 591 VGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQIF 650
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
K +L +++ R+FS ELR LF +E+
Sbjct: 651 KDSLRRQTTGDKKNPFRYFSKQELRELFTIED 682
>gi|408399646|gb|EKJ78744.1| hypothetical protein FPSE_01112 [Fusarium pseudograminearum CS3096]
Length = 1894
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 288/552 (52%), Gaps = 53/552 (9%)
Query: 130 KDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA---YGCIMADEMGLGKTLQ 186
K++ Q + V+ ++ ++ HQ +GV+F++ + + DA GC++A MGLGKT+Q
Sbjct: 902 KEEDQGLIYVNDHIARSIKQHQVDGVRFIWNQI----VRDASVRQGCLLAHTMGLGKTMQ 957
Query: 187 CITLMWTLLRQGPLAKPLI----------DKAIIVAPSSLVKNWCNEITKWL-GGRVAAL 235
IT++ L P + + +++ P++LV NW +E+ KW + AL
Sbjct: 958 VITVLVALAEASESQDPSVVAQIPKDLQNSRTLVLCPAALVDNWMDELLKWAPANALGAL 1017
Query: 236 PIDGGSKAEIDNK--LNSFMQTYGRRPVNPILVISYETFRS------HASVLHKNEVGLV 287
+ E + + S+ G +L++ Y+ F+ S L ++ +V
Sbjct: 1018 RKCTANTPEHERPSIVTSWASGKG------VLLVGYKMFQKLIDMSPELSNLLRDRPDVV 1071
Query: 288 LCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEF 347
+CDE H +KN ES+T A + K R+ L+G+P+ N++LEYF+++ +V LG EF
Sbjct: 1072 VCDEAHHMKNRESKTNIACSRFQTKSRIALTGSPLSNNVLEYFAMIDWVAPNFLGPYSEF 1131
Query: 348 RKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVC 407
R+ Y P+ RG +S AE+ +A L+ L +V + RR +L LP K E ++
Sbjct: 1132 REIYSAPVERGLYHDSSPAEKREAQMVLKALEQMVAPKVHRRNIVVLKGDLPPKQEFIIF 1191
Query: 408 IKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI--- 464
+ T+LQK+LY IK + G +T+ G ++I L +C+HP KI
Sbjct: 1192 VPPTELQKKLYRLYIKG-----VSREGADTQAG--TFAAIFHLGLICSHPKCFQAKISEI 1244
Query: 465 -------QTGADGFENAMNILPTGYAASYKSGKLLIE--LSAKLMVLDTMLAVIKMTTDD 515
+ G + ++ + + + +S L S K +L T+L + +D
Sbjct: 1245 IQNQLMSKVGEETDKSFPKTIIPEFTRTLESFADLDSPAFSWKTELLTTILNEAR-EVND 1303
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKA 575
K+++ S TLD E++ K +G RLDG + R + V+ FN+ S E +F++S+ A
Sbjct: 1304 KVLVFSQSLDTLDYLEKMCKTQGRTVSRLDGKTRVADRQQQVKDFNQGSKE-VFLISTAA 1362
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GG GLN+ GANR+V+FD +NP+++ QA+ R +R GQ+K FVYRF+ G+ E+ + RQ
Sbjct: 1363 GGVGLNIQGANRVVIFDIRYNPSHEQQAVGRAYRIGQQKKVFVYRFMVAGTFEDNLNNRQ 1422
Query: 636 AHKKALSSCVVD 647
K L+S VVD
Sbjct: 1423 VFKMQLASRVVD 1434
>gi|325179864|emb|CCA14266.1| hypothetical protein SORBIDRAFT_03g009030 [Albugo laibachii Nc14]
Length = 938
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 175/572 (30%), Positives = 282/572 (49%), Gaps = 59/572 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L PHQR+ +++++ E G I+ DEMGLGKT++ + + + +
Sbjct: 152 LYPHQRQCLEWLHWLH-----ERNTGGILGDEMGLGKTVEIVAYVAAMH-----GAHRLR 201
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNK-----LNSFMQTYGRRPV 261
+++ P+S++ W E KW L GS + NK ++ ++ + R
Sbjct: 202 SVLLLCPASVLLQWTREFHKWYPKMRITLLHSTGSGVVLSNKSYTELVHEIVENHRREDT 261
Query: 262 NP----------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ +++ +YE R + +L + V+ DEGHR++N ++ +
Sbjct: 262 SQQADNFTGTGGVILTTYENARQNQQLLLNIDWDYVVLDEGHRIRNPDADISLVCKQFRT 321
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
R++L+GTPIQN L E +SL FV G LGT F ++ PI G + AS + A
Sbjct: 322 VHRLILTGTPIQNHLRELWSLFDFVYPGKLGTLPTFEDEFVLPIKTGGYANASKMQVVMA 381
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYL--PVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
+ L ++N ++RRT + L P K E ++ ++T Q + Y ++S V R
Sbjct: 382 YKCALVLRDVINPYMLRRTKKEIQDTLELPEKMEHILFCRLTAYQHDQYEAYLRSPEVAR 441
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ + +I++L+ LCNHPDLV G AS
Sbjct: 442 VLS------YELRPFRAISTLRHLCNHPDLVK-----------------RAGDEASRSEN 478
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
IE S K++VL +LA+ K +++L + LD+ ERL + GY + RLDGS
Sbjct: 479 FGSIEKSGKMLVLCKILAMWK-DQGHRVLLFTQTRMMLDILERLMEHLGYNHCRLDGSTP 537
Query: 550 IKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
+K+R ++++ FN S FIF+L+++AGG G+NL GANR+V+FDPDWNP+ D QA R W
Sbjct: 538 VKERQRLLDKFNDAESGIFIFLLTTRAGGIGINLAGANRVVIFDPDWNPSTDMQARERSW 597
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL- 667
R GQ K +YR +++G+IEEK+ RQ K+ L++ V+ + R F+ LR LF L
Sbjct: 598 RIGQIKQVTIYRLITSGTIEEKIYHRQIFKQYLTTKVLH-DPKRKRCFNRHTLRDLFTLA 656
Query: 668 -----EENTISDTHDKIKCSRCVNGIQVKPPP 694
E TH+ ++ + V PP
Sbjct: 657 SGAQPEAKEGMKTHEGVETTDLFLAGHVPAPP 688
>gi|357162876|ref|XP_003579552.1| PREDICTED: DNA excision repair protein ERCC-6-like [Brachypodium
distachyon]
Length = 999
Score = 255 bits (652), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 294/560 (52%), Gaps = 65/560 (11%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L PHQREG+++++ V R G I+ D+MGLGKT+Q + L LI
Sbjct: 288 MLYPHQREGLRWLW--VLHCR---GTGGILGDDMGLGKTMQVSAFLAGLFHSR-----LI 337
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+ ++VAP +L+ +W E++ +G + G S N NS +Q R V IL
Sbjct: 338 RRVLVVAPKTLLTHWMKELS-VVGLKEKIRDYSGPSV----NIRNSELQYAFR--VGGIL 390
Query: 266 VISYETFRSHASVLHKN--------EVG----LVLCDEGHRLKNCESQTYQALMGLKAKR 313
+ +Y+ R++ ++ + E G V+ DEGH +KN ++Q Q+L+ +
Sbjct: 391 LTTYDIVRNNYKLMRGDFYNDADDEEEGRLWDYVILDEGHIIKNPKTQRAQSLLQIPCVH 450
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R+++SGTPIQN+L E ++L F ILG EF+ +YE PILRG D A++ E+ +
Sbjct: 451 RIVISGTPIQNNLKEMWALFFFCCPEILGDKDEFKTRYELPILRGNDKSATNREKHIGSN 510
Query: 374 RLEQLIGIVNRCLIRR--------TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
++L + +RR T + K L K E ++ +K+T Q++LY + S+
Sbjct: 511 VAKELRERIKPYFLRRMKSEVFLDTGSTDDKKLSKKNELIIWLKLTACQRQLYEAFLNSE 570
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-------QTGADGFEN----- 473
V +M+G + L++IT LKK+C+HP ++ + G DG N
Sbjct: 571 LVHSSMQG--------SPLAAITILKKICDHPLILTKRAAEGILEGMEGMDGLNNQEIGM 622
Query: 474 ----AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
A N+ A + ++ E+S KL + ++L + + +++ S + L+L
Sbjct: 623 VEKMAKNL--ADMAHDDDALQVDQEVSCKLSFIMSLLRKL-LEEGHHVLIFSQTRKMLNL 679
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
+ L GYK++R+DG+ I +R ++V+ F + IF+L+++ GG GL L A R++
Sbjct: 680 IQEAILLEGYKFLRIDGTTKISERERIVKDFQEGPGAQIFLLTTQVGGLGLTLTKAARVI 739
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+ DP WNP+ D+Q++ R +R GQ K VYR +++G+IEEK+ + Q K AL + +
Sbjct: 740 VVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEQK 799
Query: 650 EDVARHFSMSELRSLFQLEE 669
E R+FS +++ LF L E
Sbjct: 800 EQT-RYFSKRDIQELFSLPE 818
>gi|255076739|ref|XP_002502040.1| predicted protein [Micromonas sp. RCC299]
gi|226517305|gb|ACO63298.1| predicted protein [Micromonas sp. RCC299]
Length = 1481
Score = 255 bits (651), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 178/558 (31%), Positives = 275/558 (49%), Gaps = 59/558 (10%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQR +K+++E + + A G I+ DEMGLGKT+Q + L R G L +P +
Sbjct: 628 HQRTSIKWLWE----LHCQRA-GGIIGDEMGLGKTVQVSAFLCALERSG-LYRP----TL 677
Query: 210 IVAPSSLVKNWCNEITKWLGG-----------RVAALPIDGGSKAEIDNKL--NSFMQTY 256
+V P+++++ W E+ W +AL G+K KL +
Sbjct: 678 VVCPATMLRQWRRELRAWAPALRPVILHESAVSQSALADARGNKKSARLKLLRDCVADAK 737
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
G +L+ +YE R + G + DEGH+++N ++ L+ R++
Sbjct: 738 G------VLLTTYEHLRLMRDHVLSVRWGYAVLDEGHKIRNPDADVTICAKQLQTVHRLI 791
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
++G PIQN L E +SL F G LGT F+ Q+ PI G S AS + A
Sbjct: 792 MTGAPIQNRLSELWSLFDFCFPGKLGTLPVFQAQFAVPIQLGGYSNASQQQVVTAYRCAT 851
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L +++ L+RR A ++ LP KTEQV+ MT Q+E Y + I S V ++G
Sbjct: 852 MLKDLISPYLLRRMKADVNINLPKKTEQVLFCPMTGEQREAYRSYIHSRDVEEILEGRRE 911
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
AL I L+K+ NHPDL+ Q A S K G+ E S
Sbjct: 912 ------ALGGIDVLRKIVNHPDLLERTTQ-----------------AHSEKYGE--AERS 946
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
KL+V + +L + + + +L S Q LD+ E GY Y R+DG+ + R ++
Sbjct: 947 GKLLVTEKVLGLWR-EQGHRCLLFSQTQQMLDILEAAIARAGYTYRRMDGTTPVSHRMRL 1005
Query: 557 VETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
++ FN + F+F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQ K
Sbjct: 1006 IDEFNGDDDVFVFLLTTKVGGLGVNLTGADRVLLYDPDWNPSTDAQARERAWRIGQTKEV 1065
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE---NTIS 673
VYR ++ G+IEEK+ RQ +K+ L+S V+ + R F +L LF EE NT
Sbjct: 1066 TVYRLITAGTIEEKVYHRQIYKEFLTSKVLK-DPKQRRFFKAKDLADLFTWEEDNANTKP 1124
Query: 674 DTHDKIKCSRCVNGIQVK 691
D I+ + ++ +
Sbjct: 1125 GKEDAIETAELFTEVEAE 1142
>gi|242010572|ref|XP_002426039.1| DNA repair and recombination protein RAD26, putative [Pediculus
humanus corporis]
gi|212510049|gb|EEB13301.1| DNA repair and recombination protein RAD26, putative [Pediculus
humanus corporis]
Length = 1206
Score = 255 bits (651), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 286/541 (52%), Gaps = 37/541 (6%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
++ N L +QR GV++++E + I+ G I+ DEMGLGKT+Q I + L L+
Sbjct: 337 IIWNKLFKYQRVGVQWLWE----LNIQQC-GGILGDEMGLGKTIQIIAFLAGLSVSKLLS 391
Query: 202 KPLIDKAI----IVAPSSLVKNWCNEITKWL-GGRVAALPIDGGSKAEIDNKLNSFMQTY 256
+ + + IV P++++ W E KW RVA L G + + + + +++
Sbjct: 392 RHGYFRGLGPVLIVCPTTVMHQWVREFHKWWPQFRVALLHESGTYHGKKYDLIKNIIKSN 451
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
G IL+ SY T +S L + + V+ DEGH+++N +SQ + L R++
Sbjct: 452 G------ILITSYITCLQQSSDLQRQKWHYVILDEGHKIRNPDSQIAINIKLLNTPHRLI 505
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSG+PIQN+L E +SL F+ G LGT F ++ PI +G + AS + A +
Sbjct: 506 LSGSPIQNNLKELWSLFDFIFPGKLGTLPVFLAEFGVPITQGGYANASKVQVLTAYKCAT 565
Query: 377 QLIGIVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L ++ L+RR + + LP K EQV+ ++T+ QKELY N + S +V G
Sbjct: 566 VLRDTISPYLLRRAKEDVKTHINLPPKNEQVLFCRLTNEQKELYVNYLNSGSVNEIFNGK 625
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE-NAMNILPTGYAASYKSGKLLI 493
+ +G+ +L+K+CNHP L G + + + +P Y
Sbjct: 626 QKLFVGLI------NLRKICNHPHLY----SGGPKHVKLDDLEFIPEENKFGY------W 669
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ + K++V++T+L + K ++++ + + L + E + Y+Y++LDG+ I R
Sbjct: 670 KKAGKMIVMETLLKIWK-KQGHRVLIFTQSRKMLSILENFVLSQNYEYLKLDGTTNIGSR 728
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
++ FN+ +IF+ ++ GG G+NL GANR+V++DPDWNPA D QA R WR GQ+
Sbjct: 729 QPLINKFNEEKKYYIFLSTTHVGGLGVNLTGANRVVIYDPDWNPATDMQARERAWRIGQE 788
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTIS 673
+YR +++G+IEEK+ RQ K+ L++ V+ + R F ++L LF +++ S
Sbjct: 789 NQVTIYRLVTSGTIEEKIYHRQIFKQFLTNKVLK-DPSQRRFFKSNDLYELFTYKDDEYS 847
Query: 674 D 674
+
Sbjct: 848 N 848
>gi|426257224|ref|XP_004022232.1| PREDICTED: DNA excision repair protein ERCC-6-like [Ovis aries]
Length = 1242
Score = 254 bits (650), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 179/569 (31%), Positives = 288/569 (50%), Gaps = 68/569 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +Q+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLYEYQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P+SL+ W E KW G RV G SK E L Q G
Sbjct: 143 SLVNHVLLIMPTSLISIWLREFVKWTPGMRVKTF--HGPSKDERTRNLCRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K +++ + A R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKTSSTKSAICARAIPASNRIL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPQEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRT------------SALLSKYLP------------VKTEQVVCIKMT 411
E L+ I+ +RRT A LS+ P K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEVQKKKSSNPEAQLSEKSPDVGAICEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACGLLNLG 428
Query: 468 ADGFENAMNILPTGYAAS------YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
A F I G +S S L+E S K++ L +L ++ +V S
Sbjct: 429 AAKFSVQDEI--EGEDSSDVDHIDQISDDTLMEESGKMVFLMDLLKKLRDEGHQTLVF-S 485
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
+ L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL
Sbjct: 486 QSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGL 545
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
L A+R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +
Sbjct: 546 TLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 605
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEE 669
L +++ R+FS ELR LF +E+
Sbjct: 606 LIRQTTGDKKNPFRYFSKQELRELFTIED 634
>gi|358370560|dbj|GAA87171.1| DNA repair protein Rhp26/Rad26 [Aspergillus kawachii IFO 4308]
Length = 1223
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 165/523 (31%), Positives = 272/523 (52%), Gaps = 59/523 (11%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG- 230
G I+ DEMGLGKT+Q I+ + L L +P+I +V P++++K W NE +W
Sbjct: 446 GGIIGDEMGLGKTIQVISFLAGLHYSKKLTRPVI----VVCPATVMKQWVNEFHRWWPPF 501
Query: 231 RVAALPIDGGSKAEIDNK-------------------LNSFMQTYGRRPV------NPIL 265
RV+ L G I N+ + S ++ R+ V +L
Sbjct: 502 RVSILHTSGSGMVNIRNESSREDALLSQSWNSSSSRGMPSGLKA-ARKVVKRVVEEGHVL 560
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
V +Y +++AS++ E G + DEGH+++N + L+ R++LSGTP+QN+
Sbjct: 561 VTTYSGLQTYASLVIPIEWGCAVLDEGHKIRNPNTSITIHCKELRTPHRIILSGTPMQNN 620
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E +SL FV LGT FR Q+E PI +G + AS+ + A + E L ++
Sbjct: 621 LTELWSLFDFVFPMRLGTLVNFRNQFEFPIRQGGYANASNLQVQTAAKCAETLKDAISPY 680
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
L++R ++ LP K+EQV+ ++T Q++ Y + S+ ++ + G G
Sbjct: 681 LLQRFKIDVAADLPKKSEQVLFCRLTKPQRQAYEAFLGSEEMKSILNGRRQVLFG----- 735
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
+ L+K+CNHPDL K+ S +G S K+ V+ ++
Sbjct: 736 -VDILRKICNHPDLQNHKLM-------------------SSTAGYGGGSKSGKMQVVKSL 775
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERL-SKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
L + K T K +L + + LD+ E+ + L G+ Y R+DG+ I+ R +V+ FN
Sbjct: 776 LELWK-DTGHKTLLFTQHRIMLDILEKFVNSLSGFNYRRMDGTTPIQHRQAMVDEFNNDP 834
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+ +F+L++K GG G+NL GA+R++++DPDWNP+ D QA R WR GQK+ VYR ++
Sbjct: 835 SLHVFLLTTKVGGLGVNLTGADRVIIYDPDWNPSTDVQARERAWRLGQKRDVTVYRLMTA 894
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
G+IEEK+ RQ K+ L++ ++ + + F +S+L LF L
Sbjct: 895 GTIEEKIYHRQIFKQFLTNKIL-RDPKQRQTFQLSDLHDLFSL 936
>gi|390359838|ref|XP_780898.3| PREDICTED: DNA excision repair protein ERCC-6, partial
[Strongylocentrotus purpuratus]
Length = 1004
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 288/563 (51%), Gaps = 44/563 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL----I 205
+Q+ GVK+++E G I+ EMGLGKT++ I + L +K +
Sbjct: 52 YQKIGVKWLWELH-----RQKAGGILGHEMGLGKTIEMIAFLAGLRTSALPSKGFSYRGL 106
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
+IV P++++ W E W RVA L G + ++ + ++G +
Sbjct: 107 GPVLIVCPATVLHQWLKEFHTWYPEIRVAILHESGSHSGKRESLVRDMASSHG------V 160
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
L+ S+ T R +L + V+ DEGH+++N +++ A + R++L+G+P+QN
Sbjct: 161 LITSFSTVRLRQEMLLRYNWHYVILDEGHKIRNPDAEVTLACKQFRTPHRLILTGSPMQN 220
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
+L E +SL+ FV G LGT F +Q+ PI++G + AS + A + L V+
Sbjct: 221 NLRELWSLIDFVFPGKLGTLPVFMQQFSVPIVQGGYANASKVQVQTAYKCACILRDSVSP 280
Query: 385 CLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT 442
L+RR A + + LP K EQV+ +T+ Q ++Y + S ++G
Sbjct: 281 YLLRRLKADVKQALQLPSKNEQVLFCHLTEEQTQVYEEYLASKECNLILRGE------YK 334
Query: 443 ALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVL 502
+ + +L+K+CNHPDLV +G + N+ + G + + K++V+
Sbjct: 335 VFAGLITLRKICNHPDLV-----SGGPRIFSHQNLSDEDLTEEQRYG--YYKRAGKMIVV 387
Query: 503 DTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK 562
+++L + K + +++L S Q LD+ E K R Y Y+R+DG+ TI R ++ FN
Sbjct: 388 ESLLKLWK-EQNHRVLLFSQSKQMLDIMEDFVKDR-YSYMRMDGTTTISSRQPLITKFNS 445
Query: 563 TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFL 622
F+F+L+++ GG G+NL GANR++++DPDWNP+ D QA R WR GQ K +YR L
Sbjct: 446 DPRIFLFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERSWRIGQTKQVTIYRLL 505
Query: 623 STGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN----------TI 672
+ GSIEEK+ RQ K L++ V+ + R F ++L LF L +
Sbjct: 506 TAGSIEEKIYHRQIFKTFLTNRVLK-DPRQRRFFKSNDLFELFTLGSSDKGRSTETSAIF 564
Query: 673 SDTHDKIKCSRCVNGIQVKPPPL 695
+ T+ +++ ++ +G +V P+
Sbjct: 565 AGTNSEVRPNQSSSGSKVTKEPM 587
>gi|156098278|ref|XP_001615171.1| helicase [Plasmodium vivax Sal-1]
gi|148804045|gb|EDL45444.1| helicase, putative [Plasmodium vivax]
Length = 1399
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/525 (32%), Positives = 276/525 (52%), Gaps = 51/525 (9%)
Query: 125 LLKIDKDKIQVHVVVDPV-LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
LLK ++ + ++ P ++ ++P+Q EG+ ++Y+ RI I+ADEMGLGK
Sbjct: 294 LLKDANEEDETFIIKQPANINGCMKPYQIEGLNWLYQLYRH-RI----NGILADEMGLGK 348
Query: 184 TLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
TLQ I+L+ L K + K+II+ P S + NW EI KW + A G +
Sbjct: 349 TLQTISLLCYL----RFNKNIKRKSIIICPRSTLDNWYQEIKKWCT-EMKAFKYYGSKEQ 403
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+ N Y +L+ +YE S L + ++ DE HR+KN +S
Sbjct: 404 RRELNKNVLHTDY------DVLLTTYEIVIKDKSALFDIDWFFLVIDEAHRIKNDKSVLS 457
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
++ L+++ R+L++GTP+ N+L E +SL++F+ I ++EF + + D+
Sbjct: 458 SSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDN-- 515
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI- 422
K NE + QL I+ ++RR + + LP K E V + M+ LQK+LY++++
Sbjct: 516 ------KQNEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYVFVGMSKLQKKLYSDILS 569
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY 482
K+ V M G +N L + + L+K CNHP L DG E
Sbjct: 570 KNIDVINAMTGSKNQMLNI-----LMQLRKCCNHPYLF--------DGIE---------- 606
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
Y G LIE S K+ +LD +L +K + +++L S T+ LD+ + + + Y+Y+
Sbjct: 607 EPPYIEGNHLIETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRVLDIIDDYCRWKNYEYL 665
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
R+DGS +R + FN+ S FIF+LS++AGG G+NL A+ +++FD D+NP D
Sbjct: 666 RIDGSTVGDERQIRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDI 725
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
QAM R R GQKK VYRF++ S+EEK+++R A K L S ++
Sbjct: 726 QAMDRAHRIGQKKKVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 770
>gi|340905413|gb|EGS17781.1| putative DNA repair and recombination protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1159
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 167/526 (31%), Positives = 272/526 (51%), Gaps = 57/526 (10%)
Query: 183 KTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGS 241
KT+Q I+ + L L KP+I +VAP+++++ W NE +W RV+ L G
Sbjct: 402 KTVQLISFVAALHYSKKLTKPVI----VVAPATVLRQWVNEFHRWWPPLRVSILHSSGSG 457
Query: 242 KAEI--DNKLNSFMQTYGRRPVNP-------------------ILVISYETFRSHASVLH 280
+ + ++ ++ + P +LV +Y +++ +L
Sbjct: 458 MFNVRDEGEIEELVEDWNEEKKKPTRSNKAAKQIVDRVVKHGHVLVTTYAGLQTYGDILI 517
Query: 281 KNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGI 340
E G + DEGH+++N + L+ R++LSGTP+QN+L E +SL FV
Sbjct: 518 PVEWGYAVLDEGHKIRNPNAAITIYCKELRTPNRIILSGTPMQNNLTELWSLFDFVYPMR 577
Query: 341 LGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPV 400
LGT FR Q+E PI G + A++ + A + E L ++ L++R ++ LP
Sbjct: 578 LGTLVTFRAQFEIPIRLGGYANATNLQVMTAQKCAETLKEAISPYLLQRLKVDVAADLPK 637
Query: 401 KTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV 460
K EQV+ K++ Q++ Y +KS + + + G I L+K+CNHPDLV
Sbjct: 638 KREQVIFCKLSPEQRQAYELFLKSPEMAAILNRTRQSLYG------IDILRKICNHPDLV 691
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
K++ +YK G +E S K+ V+ ++L + K K +L
Sbjct: 692 DPKLKN----------------KPNYKWGS--VEKSGKMAVVQSLLPMWKRLGH-KTLLF 732
Query: 521 SNYTQTLDLFERLSK-LRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCG 579
TQ LD+ E K L G KY+R+DG IK R +V+ FN + +F+L++K GG G
Sbjct: 733 CQGTQMLDIIEAFVKTLDGIKYLRMDGKTPIKLRQTLVDQFNTDPDLDVFLLTTKVGGLG 792
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
+NL GANR++++DPDWNP+ D QA R WR GQK+ +YR ++ G+IEEK+ RQ K+
Sbjct: 793 VNLTGANRVIIYDPDWNPSTDVQARERAWRLGQKREVTIYRLMTAGTIEEKIYHRQIFKQ 852
Query: 640 ALSSCVV-DCEEDVARHFSMSELRSLFQLE--ENTISDTHDKIKCS 682
LS+ V+ D ++ A F++++L LF L E+ +++T + K S
Sbjct: 853 FLSNKVLKDPKQQTA--FNLNDLHDLFSLNSYEDGVTETSELFKSS 896
>gi|4733988|gb|AAD28668.1| putative chromodomain-helicase-DNA-binding protein [Arabidopsis
thaliana]
Length = 1738
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 273/511 (53%), Gaps = 50/511 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
++ LR +Q EG+ F+ + I+ADEMGLGKT+Q ++++ L +
Sbjct: 636 LIGGTLRDYQLEGLNFLVNSWL-----NDTNVILADEMGLGKTVQSVSMLGFLQNTQQIP 690
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + +V P S + NW E KWL G + + + E+ NK N + GR
Sbjct: 691 GPFL----VVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTND-VHKVGRPIK 745
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
L+ +YE +VL K + ++ DE HRLKN E+Q Y AL+ K ++L++GTP
Sbjct: 746 FNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTP 805
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN + E ++L+HF++ G EF + Y+ + +S E AN LE
Sbjct: 806 LQNSVEELWALLHFLDPGKFKNKDEFVENYK--------NLSSFNESELANLHLE----- 852
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGGENTKL 439
+ ++RR + K LP K E+++ ++M+ LQK+ Y +++ + + + ++G +
Sbjct: 853 LRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ---- 908
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL---S 496
++ L+ + LKK CNHP L FE+A + GY L ++ S
Sbjct: 909 -VSLLNIVVELKKCCNHPFL-----------FESADH----GYGGDINDNSKLDKIILSS 952
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
KL++LD +L ++ T ++++ S + LD+ LRG+++ RLDGS + R +
Sbjct: 953 GKLVILDKLLVRLR-ETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQA 1011
Query: 557 VETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
++ FN S++F F+LS++AGG G+NL A+ +V+FD DWNP ND QAM+R R GQ++
Sbjct: 1012 MDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEV 1071
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
+YRF+++ S+EE++++R K L V+
Sbjct: 1072 VNIYRFVTSKSVEEEILERAKRKMVLDHLVI 1102
>gi|308800854|ref|XP_003075208.1| Cockayne syndrome group B (ISS) [Ostreococcus tauri]
gi|116061762|emb|CAL52480.1| Cockayne syndrome group B (ISS), partial [Ostreococcus tauri]
Length = 1134
Score = 254 bits (649), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 265/529 (50%), Gaps = 45/529 (8%)
Query: 147 LRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
L PHQ+ +K+++E C G I+ DEMGLGKT+Q + + L G +
Sbjct: 339 LLPHQKTCLKWLWELHCQRA-------GGIIGDEMGLGKTVQVSSFLCALHHSG-----M 386
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG-SKAEIDNKLNSFMQTYGR--RPV 261
+IIV P+++++ W E+ W A + D S + K + + R
Sbjct: 387 YSPSIIVCPATMLRQWRRELRIWAPKLKATILHDSAMSSSSGKTKARERERVFDMCVRDG 446
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+ ILV +YE R + G + DEGH+++N ++ L+ R+++SG P
Sbjct: 447 DGILVTTYEQMRLFRDKICSVRWGYAVLDEGHKIRNPDADITIVSKQLQTVHRIVMSGAP 506
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQN L E +SL FV G LGT F+ Q+ PI G + AS+ + T A L +
Sbjct: 507 IQNRLSELWSLFDFVFPGKLGTLPVFQAQFAVPIQIGGYTNASNQQVTTAYRCAVTLKDL 566
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+ L+RR + LP KTEQV+ MT Q+E Y + S V + G
Sbjct: 567 IAPYLLRRMKCDVDVKLPEKTEQVLFCPMTQEQREAYRAYLASREVEEILDGSRE----- 621
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
AL I L+K+ NHPDL+ + Q ++ + +A +SGKL + L
Sbjct: 622 -ALGGIDVLRKIVNHPDLLERRTQAASEEYGDA-----------SRSGKLQVTLK----- 664
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
+L++ + + ++ S Q LD+ E GY Y R+DG+ +I R +++ FN
Sbjct: 665 ---VLSLWR-EQGHRCLVFSQTQQMLDILEAAVARAGYSYRRMDGNTSIGMRMSLIDEFN 720
Query: 562 KTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
F+F+L++K GG G+NL GANR+++FDPDWNP+ D QA R WR GQ+K VYR
Sbjct: 721 DNDKGIFVFLLTTKVGGLGVNLTGANRVMLFDPDWNPSTDAQARERAWRIGQQKEVTVYR 780
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
++ G+IEEK+ RQ +K+ L+S V+ + R F ++ LF +E
Sbjct: 781 LITAGTIEEKVYHRQIYKEFLTSKVLK-DPKQRRFFKARDMADLFTFDE 828
>gi|168023352|ref|XP_001764202.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella
patens subsp. patens]
gi|162684642|gb|EDQ71043.1| transcription-coupled repair protein CSB/RAD26 [Physcomitrella
patens subsp. patens]
Length = 802
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 260/533 (48%), Gaps = 68/533 (12%)
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKT+Q + + L G + +I+V P +L++ W E KW + D
Sbjct: 1 MGLGKTIQVLVFLAGLHNSG-----MYTPSIVVCPVTLLRQWKREAKKWYPAFNVEILHD 55
Query: 239 G-----------------GSKAEIDNKLNSFMQTYGRRPV------------------NP 263
GS E D + + + + +PV +
Sbjct: 56 SAVASQKSSNKKKRKPKRGSDEEFDEEESDYSENEQEKPVKVKKDRWDGMIDRVVDSSDG 115
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
I++ +YE R L G + DEGHR++N ++ T L+ R++++G PIQ
Sbjct: 116 IILTTYEQLRIVRDKLLDINWGYAILDEGHRIRNPDAGTTLICKQLQTVHRIIMTGAPIQ 175
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
N L E +SL FV G LG F+ Q+ PI G S A+ + + A L ++
Sbjct: 176 NRLTELWSLFDFVFPGKLGVLPVFQAQFSLPIAIGGYSNATPLQVSTAYRCAVVLRDLIM 235
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTA 443
L+RR + + +LP KTE V+ +T Q+ Y + S V + G N+ G
Sbjct: 236 PYLLRRMKSDVDAHLPKKTEHVLFCSLTKDQRSAYRAFLASSEVEQIFDGNRNSLFG--- 292
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLD 503
I L+K+CNHPDL+ + G + N IE S KL VL
Sbjct: 293 ---IDILRKICNHPDLLEREHSAGHPDYGN-------------------IERSGKLKVLA 330
Query: 504 TMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKT 563
+L + K T +++L + Q LD+ E +GY Y R+DG+ +K+R ++++ FN+
Sbjct: 331 QVLELWK-TQGHRVLLFTQTQQMLDIVENYVTSKGYVYRRMDGNTPVKQRMQLIDEFNEG 389
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
+ FIF+L++K GG G NLIGANR+V+FDPDWNP+ D QA R WR GQKK +YR ++
Sbjct: 390 DHVFIFILTTKVGGLGTNLIGANRVVIFDPDWNPSTDMQARERAWRIGQKKEVVIYRLIT 449
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL-EENTISDT 675
G+IEEK+ RQ +K L++ ++ + R F ++R LF L EEN ++T
Sbjct: 450 RGTIEEKVYHRQIYKHFLTNKILRDPQQ-RRFFKARDMRDLFTLQEENAATET 501
>gi|380029956|ref|XP_003698629.1| PREDICTED: DNA excision repair protein ERCC-6-like [Apis florea]
Length = 987
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 168/541 (31%), Positives = 284/541 (52%), Gaps = 36/541 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW-----TLLRQGPLA 201
L +Q+ V++++E +R + G ++ DEMGLGKT+Q I + LL G
Sbjct: 178 LYKYQKISVQWLWEL--HLR---SLGGLLGDEMGLGKTVQVIAFLAGLDCSELLSDGGRF 232
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
+ L I++ P++L++ W +W R+ L G ++ ++S +++ G
Sbjct: 233 RGL-GPTIVICPATLMEQWVKHFHEWWPLLRIVVLHQSGTYNGNLEYLIDS-LKSGG--- 287
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
I++ SY H +L N+ V+ DEGH+++N +++ +A+ R+LL+G+
Sbjct: 288 ---IIITSYSGMLKHKDLLVSNQWHYVILDEGHKIRNPQAKVSKAVKEFSTPHRLLLTGS 344
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN L E +SL F+ G LGT F + PI RG + A+ + A + L
Sbjct: 345 PMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEATALQVAMMLRD 404
Query: 381 IVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM---KGGE 435
+ ++RRT + + LP K EQV+ +T+ QK+LY + S V + E
Sbjct: 405 AITPYMLRRTKNDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLCSTDVSFILHEKNNIE 464
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
N K L ++++L+K+CNHPDL + +D + N + +SGK++
Sbjct: 465 NGKYRARLLIALSALRKICNHPDLYLYTSPIDSDEDIDISNETLEKFGYWKRSGKMI--- 521
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
V+ ++L + K +++L + Q + + E L + Y Y+R+DG+ + R +
Sbjct: 522 -----VVRSLLKIWK-KQGHRVLLFTQGRQMMHVLESLVQSEQYTYLRMDGTTPMSHRQE 575
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
+ +FN+ S+ FIF+L+++ GG G+NL GANR+V++DPDWNPA D QA R WR GQ K
Sbjct: 576 TIRSFNRDSSYFIFLLTTRVGGLGVNLTGANRVVIYDPDWNPATDAQARERAWRIGQNKN 635
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT 675
+YR ++ G+IEEK+ RQ K LS+ V++ + R F ++L LF E+T D
Sbjct: 636 VTIYRLITAGTIEEKIYHRQIFKILLSNKVLE-DPRQRRLFKTNDLVELFNFNEST--DD 692
Query: 676 H 676
H
Sbjct: 693 H 693
>gi|148886758|ref|NP_001092144.1| DNA excision repair protein ERCC-6-like [Rattus norvegicus]
gi|149042163|gb|EDL95870.1| similar to SNF2/RAD54 family protein (predicted) [Rattus
norvegicus]
Length = 1230
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/584 (29%), Positives = 293/584 (50%), Gaps = 82/584 (14%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G L++
Sbjct: 96 LFEHQKEGIAFLYSLYKNGR----KGGILADDMGLGKTVQIIAFL-----SGMFDASLVN 146
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+++ P++L+ W E KW G RV G SK E L Q G ++
Sbjct: 147 HVLLIMPTNLINTWVKEFAKWTPGMRVKTF--HGSSKNERIRNLTRIQQRNG------VV 198
Query: 266 VISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRV 315
+ +Y+ +F A V V+ DE H++K+ +++ + A R+
Sbjct: 199 ITTYQMLLNNWQQLASFNGQAFVW-----DYVILDEAHKIKSASTKSAVCARAVPASNRL 253
Query: 316 LLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ +
Sbjct: 254 LLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPIIRAREKDATPGEKALGFKM 313
Query: 375 LEQLIGIVNRCLIRRTS--------------------------ALLSKYLPVKTEQVVCI 408
E L+ I+ +RRT +LS L K + +V I
Sbjct: 314 SENLMEIIKPYFLRRTKEEVHMKKADKPEVRPGEKNSGVEDICEMLS--LTRKNDLIVWI 371
Query: 409 KMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----I 464
++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + +
Sbjct: 372 RLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACHLL 425
Query: 465 QTGADGF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIV 518
G F EN + + S L++ S K++ L +A+++ D+ + +
Sbjct: 426 NLGTVTFSAEDENEQEDASNMGSIDHLSDNALMQESGKMIFL---MALLERLQDEGHQTL 482
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGG 577
+ S Q L++ ERL K + +K +R+DG++T + +R K ++ F + +F+L+++ GG
Sbjct: 483 VFSQSRQILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGG 542
Query: 578 CGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAH 637
GL L A+R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ
Sbjct: 543 VGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVF 602
Query: 638 KKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K +L +++ R+F+ EL+ LF + + S T +++C
Sbjct: 603 KDSLIRQTTGDKKNPFRYFTKQELKELFTVGDLLNSATQMQLQC 646
>gi|342885837|gb|EGU85789.1| hypothetical protein FOXB_03637 [Fusarium oxysporum Fo5176]
Length = 1979
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 268/532 (50%), Gaps = 49/532 (9%)
Query: 147 LRPHQREGVKFMYECVT---GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP 203
++ HQ +GV+F++ + VR GC++A MGLGKT+Q IT++ L P
Sbjct: 1036 IKDHQIDGVRFIWNQIVRDPSVR----QGCLLAHTMGLGKTMQVITVLVALAEAAQSKDP 1091
Query: 204 LI----------DKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNK---LN 250
+ + +++ P++LV NW +E+ KW + S ++ + ++
Sbjct: 1092 SVVAQIPEDLREPRILVLCPAALVDNWIDELLKWAPADLLGELRKVSSNTPVEERAAVVS 1151
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASV------LHKNEVGLVLCDEGHRLKNCESQTYQ 304
S+ G +L + YE F+ ++ L N +V+ DE H++KN ESQT
Sbjct: 1152 SWASGRG------VLTLGYEMFKKIMNLSEELADLLTNRPDVVIADEAHKMKNRESQTNL 1205
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
A + K R+ L+G+P+ N +LEYF+++ +V LG EF Y +P+ RG + ++
Sbjct: 1206 ASSRFRTKSRIALTGSPLSNSVLEYFAMIDWVAPNFLGPFSEFSHIYASPVERGLYNDST 1265
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
AE+ +A RL+ L +V + R T A L LP K E ++ + T QK+LY I+
Sbjct: 1266 PAEKRRAQMRLKALEQLVAPKINRHTIAALKSDLPPKQEFIIFVPPTTPQKQLYQLYIRG 1325
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF----ENAMNILPT 480
A E T ++I L +C+HP K++ G +N P
Sbjct: 1326 VA-------REGTDSQAETFAAINHLGLICSHPRCFEAKVKAIQKGIRSNSDNEDKSFPK 1378
Query: 481 GYAASY-KSGKLLIELSAKLMVLDTMLAVIKM----TTDDKIVLVSNYTQTLDLFERLSK 535
+ ++ +L + L T L I + DK+++ S TLD E + +
Sbjct: 1379 SMIPEFLETLHSFRDLETPTLSLKTELLTIILDEARQVKDKVLIFSQSLHTLDYIENMCR 1438
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
++ RLDGS + R + + FN+ S E +F++S+ AGG GLN+ GANR+V+FD +
Sbjct: 1439 MQRRTVSRLDGSTPVPSRQRQTKDFNEGSKE-VFLISTTAGGVGLNIQGANRVVIFDVRY 1497
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
NP+++ QA+ R +R GQ+KP FVYRF+ G+ E+ + RQ K L+S VVD
Sbjct: 1498 NPSDEQQAVGRAYRIGQQKPVFVYRFMVAGTFEDNLHNRQVFKMQLASRVVD 1549
>gi|412988921|emb|CCO15512.1| DNA repair and recombination protein RAD26 [Bathycoccus prasinos]
Length = 1189
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 171/551 (31%), Positives = 268/551 (48%), Gaps = 72/551 (13%)
Query: 147 LRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKP- 203
L PHQ+ VK+++E C G I+ DEMGLGKT+Q + G L+K
Sbjct: 376 LLPHQKTAVKWLWELHCQRA-------GGIIGDEMGLGKTVQVAAFL------GALSKSN 422
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWL-----------GGRVAALPIDGGSKAEIDNKLNSF 252
L +++V P+++++ W E+ W AL + G++ N + +
Sbjct: 423 LYQASVVVCPATMLRQWRRELKIWAPELKPVVLHDSAITQDALKVANGNRK---NAMKNA 479
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
++ R P +++ +YE R L G + DEGH+++N E+ L+
Sbjct: 480 IRNATRDP-KGLVITTYECLRGMREDLLTVRWGYAVLDEGHKIRNPEADITVVSKRLRTV 538
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
R++++G P+QN L E +SL+ FV G LGT F+ Q+ PI G ASD T A
Sbjct: 539 HRIIMTGAPVQNRLSELWSLIDFVYPGKLGTLPVFQAQFAVPIQIGGYVNASDQAATTAY 598
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
L +++ L+RR L LP KTEQV+ MT+ Q++ Y + S V +
Sbjct: 599 RCAVALKDLISPYLLRRLKQDLDINLPDKTEQVLFCPMTENQRDAYKGFLSSREVEDIID 658
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G AL I L+K+ NHPDL+ + G Y +SGKL
Sbjct: 659 GRRE------ALGGIDVLRKIVNHPDLLERNSRAG-----------DANYGDPVRSGKLQ 701
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
+ L +L++ K + + ++ S Q LD+ E+ GY Y R+DG+ +
Sbjct: 702 VALK--------ILSMWK-SQGHRCLVFSQTQQMLDILEQAVANEGYTYRRMDGTTPVAH 752
Query: 553 RAKVVETFNKTSNE--------------FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
R +V++FN N F+F+L++K GG G+NL GANR+++FDPDWNP+
Sbjct: 753 RMGLVDSFNDAGNVGEEGVAAEDMQEPVFVFLLTTKVGGLGINLTGANRVLLFDPDWNPS 812
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSM 658
D QA R WR GQ K +YR ++TG+IEEK+ RQ +K+ L+ V+ + R F
Sbjct: 813 TDAQARERAWRIGQTKAVTIYRLITTGTIEEKVYHRQIYKEFLTGKVLK-DPKQRRFFKA 871
Query: 659 SELRSLFQLEE 669
++ LF ++
Sbjct: 872 RDMMDLFAYDD 882
>gi|260948588|ref|XP_002618591.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720]
gi|238848463|gb|EEQ37927.1| hypothetical protein CLUG_02050 [Clavispora lusitaniae ATCC 42720]
Length = 1186
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 261/543 (48%), Gaps = 86/543 (15%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
G I+ DEMGLGKT+Q I + L G L KP++ +V P++++ W NE +W
Sbjct: 421 GGILGDEMGLGKTIQVIAFLAGLHYSGLLDKPVL----LVVPATVMNQWVNEFHRWWP-- 474
Query: 232 VAALPIDGGSKAEIDNKLNSFMQTYGR-------------------RPVNP--------- 263
P+ + I + + S M+ R R N
Sbjct: 475 ----PL----RCVILHSIGSGMKNMARMEEELEEHLDEEGEGELSVRAANAQANASEMVQ 526
Query: 264 -------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+LV +Y R +A + +E G + DEGH+++N S A +K RV+
Sbjct: 527 RVLQHGHVLVTTYVGLRVYAKHILPHEWGYAVLDEGHKIRNPNSAISLACKRIKTHNRVI 586
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
LSGTPIQN+L+E +SL FV G LGT F +Q+ PI G + AS+ + +
Sbjct: 587 LSGTPIQNNLIELWSLFDFVFPGRLGTLPVFEQQFAIPINMGGYANASNLQVQTGYKCAV 646
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L +++ L+RR A +++ LP K+E V+ +K+T Q ++Y + S+ MKG
Sbjct: 647 VLRDLISPYLLRRLKADVAQDLPKKSEMVLFVKLTQYQHDMYEKFLGSEDAAAIMKGRRR 706
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
+G + L+K+CNHPDLV G+ Y + +SGK
Sbjct: 707 VLMG------VDILRKICNHPDLVDRTALLHKKGY---------NYGSPARSGK------ 745
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL------------SKLRGYKYVRL 544
M + L + + +L Q LD+ ER +Y+R+
Sbjct: 746 ---MQVARQLLQLWQAQGHRTLLFCQTRQMLDILERFVARMSCIDAQGAETSNPMRYLRM 802
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DGS I KR ++V+TFN +F+L++K GG G+NL GA+R+++FDPDWNP+ D QA
Sbjct: 803 DGSTPIGKRQQLVDTFNANEYYHVFLLTTKVGGLGVNLTGADRVIIFDPDWNPSTDIQAR 862
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ +YR ++ G+IEEK+ RQ K L++ ++ + R F ++L L
Sbjct: 863 ERAWRLGQKRDITIYRLMTAGTIEEKIYHRQIFKTFLTNKILK-DPKQRRFFKSADLHDL 921
Query: 665 FQL 667
F L
Sbjct: 922 FTL 924
>gi|169610587|ref|XP_001798712.1| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
gi|160702104|gb|EAT84675.2| hypothetical protein SNOG_08399 [Phaeosphaeria nodorum SN15]
Length = 1203
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 270/543 (49%), Gaps = 68/543 (12%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E + G I+ DEMGLGKT+Q I+ + L L KP+I
Sbjct: 394 YQKTGVQWLWELY-----QQNVGGIIGDEMGLGKTIQAISFVAGLHYSKQLTKPVI---- 444
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--DNKLNSFMQ--TYGRRPV--- 261
W NE KW RV+ L G + +++L M+ +YG
Sbjct: 445 ---------VWVNEFHKWWPALRVSILHTSGSGMLDTRREDRLEREMELRSYGDYDATLT 495
Query: 262 ----------------NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
+LV +Y ++++ L + + DEGH+++N +
Sbjct: 496 GAGKQAKKILERVKHDGHVLVTTYSGLQTYSEFLIPTDWECAILDEGHKIRNPNTSITIH 555
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L+ R++LSGTP+QN+L E +SL FV LGT FR Q+E PI RG + AS+
Sbjct: 556 CKELRTPNRIILSGTPMQNNLTELWSLFDFVFPMRLGTLVNFRNQFEFPIKRGGYANASN 615
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
E A + E L V+ L++R + ++ LP K EQV+ K+T Q+ Y + S+
Sbjct: 616 LEFETAVQCAETLKDAVSPYLLQRFKSDVATDLPQKKEQVLFCKLTRQQRLAYEGFLASE 675
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAAS 485
++ G L + L+K+CNHPDL K + G++ Y A
Sbjct: 676 DMKSISSGKRQM------LYGVDYLRKICNHPDLTEHKTLSKQPGYD---------YGAP 720
Query: 486 YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSKLRGYKYVRL 544
KSGK+ V+ +L++ K K +L + + LD+ ++ L + Y R+
Sbjct: 721 NKSGKM--------QVVKELLSLWKKGGH-KTLLFAQHRIMLDILQKFLDHIPEINYRRM 771
Query: 545 DGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAM 604
DG IK R +V+ FN N +F+L++K GG G+NL GANR++++DPDWNP+ D QA
Sbjct: 772 DGETAIKNRQDLVDEFNNDPNLHVFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDIQAR 831
Query: 605 ARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSL 664
R WR GQK+ +YR +S G+IEEK+ RQ K+ L++ V+ + + F MS+L L
Sbjct: 832 ERSWRLGQKREVEIYRLMSAGTIEEKIYHRQIFKQFLTNKVLK-DPKQRQTFQMSDLHDL 890
Query: 665 FQL 667
F L
Sbjct: 891 FTL 893
>gi|196008861|ref|XP_002114296.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
gi|190583315|gb|EDV23386.1| hypothetical protein TRIADDRAFT_11949 [Trichoplax adhaerens]
Length = 616
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 178/594 (29%), Positives = 291/594 (48%), Gaps = 73/594 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
++ LR +QREG++F+Y R G I+ D+MGLGKT+Q I + +L + +
Sbjct: 39 INRYLREYQREGIQFLYNNYKANR-----GSILGDDMGLGKTVQIIGFIAAVLNKSGTKE 93
Query: 203 PLIDKA---------------IIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDN 247
++ K +IV+P S++ NW +E+ W G K E
Sbjct: 94 DVMKKLWWKSSPSPTNKRQSFLIVSPGSVLYNWIDELNTW--GHFKVGRFHASHKDETLQ 151
Query: 248 KLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM 307
+L GR V ++ ++ET R++ L+ + V+ DE HRLK+ +S+ A+
Sbjct: 152 QLEK-----GRLDV---VLTTFETLRNYLDDLNSFKWLAVIVDEAHRLKDGKSKVTIAMK 203
Query: 308 GLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAE 367
+K +RR+ L+GT +QN L E++ L+ + N G LGT F+K YE+PI +G+ + E
Sbjct: 204 NIKCRRRIGLTGTAMQNRLSEFWCLLDWANPGCLGTLGTFQKDYESPIKQGRKFNVTKRE 263
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
+N + E+L + ++ +RRT AL+++ LP K E+VV +++LQ LY L+K+ V
Sbjct: 264 LANSNLKSEELTKLHSQWFLRRTKALIAEQLPKKDEKVVFCYLSELQNNLYEELLKNSDV 323
Query: 428 RRTMKGGE--------------------NTKLGMTALSSITSLKKLCNHPDLVMDKIQTG 467
++ E K+ + + K+ NH L++
Sbjct: 324 DLIVRQSEPCDCGSKKNRGKCCYQTNIKGEKINSLLMQYLQLFLKVANHVALLLPNSNQS 383
Query: 468 ADGFENAMNILPTGYA-----ASYKSGKLLIELS-----AKLMVLDTMLAVIKMTTD-DK 516
+ A I Y+ S S L+ LS K+ L+ +L IK D K
Sbjct: 384 EEQRNKAREICVRMYSNFPQFKSISSNASLLTLSDPLYCGKMKALEALL--IKFKKDGSK 441
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAG 576
++L S Q L++ E +G Y RLDG+ I++RA +V FN + ++S+KAG
Sbjct: 442 VLLFSYSVQLLNILETYIMCKGINYCRLDGNTRIEQRADIVRKFNNDPQISLCLISTKAG 501
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
GLN GAN +++FDP+WNPA+D QA R +R GQ+ VYR +++G+IEE M RQ
Sbjct: 502 SLGLNFTGANSVLIFDPNWNPAHDLQAQDRAYRIGQRCDVRVYRLITSGTIEEVMYLRQI 561
Query: 637 HKKALSSCVVD----------CEEDVARHFSMSELRSLFQLEENTISDTHDKIK 680
+K L++ + +D +H + + +LF L +S D IK
Sbjct: 562 YKLQLANVAMQNSKERRYFTGVADDKEQHGELFGIENLFSLRRRGVSLAEDIIK 615
>gi|47228866|emb|CAG09381.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1286
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 162/529 (30%), Positives = 271/529 (51%), Gaps = 37/529 (6%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I+ + L R
Sbjct: 392 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQVISFLAGLSYSKLRTRGSNYRYA 446
Query: 204 LIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ IIV P++++ W E W RVA L G + + + +G
Sbjct: 447 GLGPTIIVCPATVMHQWVREFHAWWPPFRVAVLHETGSFSSNKKKLIPEIVSCHG----- 501
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R L + + ++ DEGH+++N + A + R +LSG+P+
Sbjct: 502 -ILITSYSAVRIMQDTLQRWDWHYIILDEGHKIRNPNAGVTLACKQFRTPHRFILSGSPM 560
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL FV G LGT F +Q+ PI G S AS + A + L +
Sbjct: 561 QNNLKELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAFKCACVLRDTI 620
Query: 383 NRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR A + LP K EQV+ K+T+ Q+++Y + + S V + +
Sbjct: 621 NPYLLRRMKADVKANLSLPDKNEQVLFCKLTEEQRQVYRSFLDSKEVYQILN------RD 674
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M + +L+K+CNHPDL + G + + A + G + S KL+
Sbjct: 675 MQVFPGLIALRKICNHPDLF-------SGGPQFLRGVPEDQLAQEDRFG--FWKRSGKLI 725
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L + +++L + Q L++ E + Y Y+++DG+ +I R ++ +
Sbjct: 726 VVESLLRLW-FRQGQRVLLFTQSRQMLNILEVFVRENNYSYLKMDGTTSISSRQPLIARY 784
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ FIF+L++K GG G+NL GANR++++DPDWNP+ D QA R WR GQ + +YR
Sbjct: 785 NEDNSIFIFLLTTKVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQTQQVTIYR 844
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
L+ G+IEEK+ RQ K+ L++ V+ + R F +++ LF L +
Sbjct: 845 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDIYELFTLSD 892
>gi|449018707|dbj|BAM82109.1| chromodomain helicase DNA binding protein CHD [Cyanidioschyzon
merolae strain 10D]
Length = 2014
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 157/508 (30%), Positives = 265/508 (52%), Gaps = 50/508 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
LR +Q EG+ ++ C + G I+ADEMGLGKT+Q ++ + L R+ L P +
Sbjct: 361 LREYQLEGLNWLVHCWFKRQ-----GSILADEMGLGKTIQAVSFLDYLYREQHLRGPFL- 414
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP--- 263
+VAP S + +W E W + A+ G +A + + + TY V
Sbjct: 415 ---VVAPLSTLGHWKREFETWT--HMNAIVFHGNVRAR--DVILQYEWTYAGMSVRSGLF 467
Query: 264 ---ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+L+ +YE A+ L +++ DE HRLKN +S+ + L+G +++ RVLL+GT
Sbjct: 468 KWHVLITTYEIILQEANRLRGIPWAVIVVDEAHRLKNRQSKLFDELLGFRSEHRVLLTGT 527
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN+ LE FSL+HF+ +EF++ Y + E +E L
Sbjct: 528 PLQNNSLELFSLLHFLEPAKFPNEKEFQQAYGD---------------IRDAEAVENLKA 572
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
++ L+RR + K +P K E ++ +++T +QK+ Y L + + +GG+ +G
Sbjct: 573 LLRPYLLRRMKEDVEKAIPPKEETLISVELTRIQKQWYRALYEQNFAF-LEQGGKRNNVG 631
Query: 441 MTALSSITSLKKLCNHPDLV--MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAK 498
+ + L+K CNHP L+ +++I+T ++ G A + L+E S K
Sbjct: 632 -NLRNIVMELRKCCNHPYLIRGVEEIET--------QSLAALGEDALMRH---LVEASGK 679
Query: 499 LMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVE 558
L+++D +L V++ ++++ S + LD+ E RGYK+ RLDG + R + ++
Sbjct: 680 LVLVDKLLPVLR-EKGHRVLIFSQMIRVLDILEDYLHWRGYKFERLDGRVRGNDRQQSID 738
Query: 559 TFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFV 618
F K F+F+L ++AGG G+NL A+ +++FD DWNP ND QA AR R GQ++ V
Sbjct: 739 RFQKDPENFVFLLCTRAGGQGINLTVADTVIIFDSDWNPQNDVQAQARCHRIGQERDVKV 798
Query: 619 YRFLSTGSIEEKMMQRQAHKKALSSCVV 646
YR ++ G+ EE+M R + K L V+
Sbjct: 799 YRLITRGTYEEEMFDRASKKLGLDQAVL 826
>gi|403217339|emb|CCK71833.1| hypothetical protein KNAG_0I00420 [Kazachstania naganishii CBS
8797]
Length = 1085
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 285/568 (50%), Gaps = 81/568 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+ ++L +Q+ V+++YE + G I+ DEMGLGKT+Q I + +L G L
Sbjct: 308 IHSLLFNYQKTCVQWLYELY-----QQNCGGIVGDEMGLGKTIQVIAFLASLHHSGLLNG 362
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKW-----------LGG--------------------- 230
P++ IV P++++K WCNE W +G
Sbjct: 363 PIL----IVCPATVMKQWCNEFHIWWPPFRAVILHSMGSGMTQNRRTLNEEQLEEIIMNS 418
Query: 231 ---RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP--ILVISYETFRSHASVLHKNEVG 285
++ + SK + + + + + + VN +++ +Y R H+ L K +
Sbjct: 419 NPDDISYSDLQNPSKLKTSIESGTAIDSLIEKIVNDGHVVITTYVGLRIHSDKLLKVKWA 478
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
+ DEGH+++N +S LK R++LSGTPIQN+L E +SL F+ G LGT
Sbjct: 479 YAVLDEGHKIRNPDSDISLTCKKLKTPNRIILSGTPIQNNLNELWSLFDFIFPGKLGTLP 538
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
F++Q+ PI G + AS+ + + L +++ L+RR + ++K LP K E V
Sbjct: 539 VFQQQFVLPINMGGYANASNVQVQTGYKCAVALRDLISPYLLRRVKSDVAKDLPEKKEMV 598
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MDKI 464
+ K+T QK Y + S + + ++GG+ L I L+K+CNHPDL+ ++
Sbjct: 599 LFCKLTQYQKNKYMEFLNSSELDQ-IRGGKR-----HVLYGIDILRKICNHPDLLEKNEK 652
Query: 465 QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYT 524
Q D Y +SGK M + L ++ K +L +
Sbjct: 653 QNTRD------------YGNPKRSGK---------MQVVKQLILLWKKQGHKTLLFTQSR 691
Query: 525 QTLDLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCG 579
Q LD+ ER + +Y+R+DG+ I KR +V+ FNK + +F+L+++ GG G
Sbjct: 692 QMLDILERFVSVNDPEFSDIRYLRMDGTTNISKRQNLVDQFNKGPFD-LFLLTTRVGGLG 750
Query: 580 LNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
+NL GANR+++FDPDWNP+ D QA R WR GQK+ +YR + +G+IEEK+ RQ K+
Sbjct: 751 INLTGANRIIIFDPDWNPSTDLQARERAWRIGQKREVSIYRLMVSGTIEEKIYHRQIFKQ 810
Query: 640 ALSSCVVDCEEDVARHFSMSELRSLFQL 667
L++ +++ + R F M+EL+ LF L
Sbjct: 811 FLTNKILN-DPRQKRFFKMNELQDLFTL 837
>gi|332025493|gb|EGI65656.1| DNA excision repair protein ERCC-6 [Acromyrmex echinatior]
Length = 1020
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 272/536 (50%), Gaps = 38/536 (7%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL-- 204
L +Q+ VK+++E + G ++ DEMGLGKT++ I + L L+
Sbjct: 237 LYRYQKVAVKWLWELHSR-----KLGGLLGDEMGLGKTVEIIAFLAGLDCSELLSYHGRY 291
Query: 205 --IDKAIIVAPSSLVKNWCNEITKWL-GGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
+ IIV P++L++ W +W RV L GG + ++ + S +
Sbjct: 292 RGLGPTIIVCPATLMEQWVKHFHEWWPFFRVVVLHHSGGYNGDPESLIESLQ-------I 344
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
IL+ SY H +L ++ V+ DEGH+++N +++ +A+ R+LL+G+P
Sbjct: 345 GGILITSYNGVLKHKDLLVSSQWHYVILDEGHKIRNPQAKVSRAVKRFSTPHRLLLTGSP 404
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN L E +SL F+ G LGT F + PI RG + A+ + A + L
Sbjct: 405 MQNSLKELWSLFDFILPGKLGTLPVFLEHCAMPITRGGYTNATPLQEATALQIATMLKNT 464
Query: 382 VNRCLIRRTSALLSKYL--PVKTEQVVCIKMTDLQKELYTNLIKSDAV------RRTMKG 433
+ ++RRT + +L P K EQV+ +TD QK+LY + SD V R
Sbjct: 465 ITPYMLRRTKTDVKHHLTLPEKNEQVLFCSLTDEQKKLYKKYLCSDDVSFVLHERNYCSS 524
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
G + ALS+ L+K+CNHPDL + + +D + + + ++GK+ +
Sbjct: 525 GRYRARFLIALSA---LRKICNHPDLFLYTREQDSDEDIDLSDEQIEKFGYYKRAGKMTV 581
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
S L I +++L + Q + + E L + Y Y+R+DG+ + +R
Sbjct: 582 VRS---------LLKIWQKQGHRVLLFTQGRQMMHILESLLQREKYIYLRMDGTTAMSQR 632
Query: 554 AKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
+ ++ FN S+ F+F+L+++ GG G+NL GANR+V++DPDWNPA D QA R WR GQ
Sbjct: 633 QQTIQKFNNDSSYFVFLLTTRVGGLGINLTGANRVVIYDPDWNPATDAQARERAWRIGQN 692
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
K VYR ++ G+IEEK+ RQ K LS+ V+D E + F ++L LF L E
Sbjct: 693 KQVTVYRLITAGTIEEKIYHRQIFKLLLSNKVLD-EPRQRQLFKPTDLVELFNLNE 747
>gi|224085664|ref|XP_002307656.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222857105|gb|EEE94652.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1206
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 270/561 (48%), Gaps = 78/561 (13%)
Query: 147 LRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
L +Q+ GV++++E C G I+ DEMGLGKT+Q ++ + L + KP
Sbjct: 391 LFDYQKVGVQWLWELHCQRA-------GGIIGDEMGLGKTIQVLSFLGAL-HFSNMYKP- 441
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG------------------SKAEID 246
+I+V P +L++ W E KW L D S E +
Sbjct: 442 ---SIVVCPVTLLRQWKREAQKWYPRFHVELLHDSAQDVSCRDPLKKKRAQSYESDCETE 498
Query: 247 NKLNS-FMQTYGRRPVNP--------------ILVISYETFRSHASVLHKNEVGLVLCDE 291
+ L+S + + R N +L+ +YE R L E G + DE
Sbjct: 499 DSLDSDYEGSISCRKANKWDSLINRVFESDSGLLITTYEQLRLLGEKLLDFEWGYAVLDE 558
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHR++N ++ L+ R++++G PIQN L E +SL FV G LG F ++
Sbjct: 559 GHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVMPVFEAEF 618
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
PI G + AS + + A L ++ L+RR ++ +LP KTE V+ +T
Sbjct: 619 AVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKMDVNAHLPKKTEHVLFCSLT 678
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
Q+ +Y + S V + G N+ G I ++K+CNHPDL+
Sbjct: 679 SEQRSVYRAFLASTEVENILDGSRNSLYG------IDVMRKICNHPDLL----------- 721
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLVSNYTQTLDL 529
E + Y +SGK+ + + V+K+ + +++L + Q LD+
Sbjct: 722 EREHSYHNPDYGNPERSGKMKV-----------VAQVLKVWQEQGHRVLLFTQTQQMLDI 770
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
FE GY Y R+DGS IK R +++ FN + + FIF+L++K GG G NL GANR++
Sbjct: 771 FENFLNSGGYNYRRMDGSTPIKLRMSIIDEFNNSGDIFIFILTTKVGGLGTNLTGANRVI 830
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+FDPDWNP+ D QA R WR GQKK VYR ++ G+IEEK+ RQ +K L++ ++
Sbjct: 831 IFDPDWNPSTDMQARERAWRIGQKKDVTVYRLITGGTIEEKVYHRQIYKHFLTNKILKNP 890
Query: 650 EDVARHFSMSELRSLFQLEEN 670
+ R F +++ LF L ++
Sbjct: 891 QQ-RRFFRARDMKDLFTLNDD 910
>gi|297836766|ref|XP_002886265.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332105|gb|EFH62524.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1181
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 174/561 (31%), Positives = 274/561 (48%), Gaps = 76/561 (13%)
Query: 147 LRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
L +QR GV++++E C G I+ DEMGLGKT+Q ++ + +L + KP
Sbjct: 383 LFEYQRVGVQWLWELHCQRA-------GGIIGDEMGLGKTIQVLSFLGSL-HFSKMYKP- 433
Query: 205 IDKAIIVAPSSLVKNWCNEITKWL------------------GGRVAALPIDGGSKAEID 246
+II+ P +L++ W E KW G+ A D S+ +D
Sbjct: 434 ---SIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKANESDYDSECSVD 490
Query: 247 N----------KLNSFMQTYGRRPVNP---ILVISYETFRSHASVLHKNEVGLVLCDEGH 293
+ K +S + R +N +L+ +YE R L E G + DEGH
Sbjct: 491 SDHEQKSKNTKKWDSLIN----RVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGH 546
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
R++N S L+ R++++G PIQN L E +SL FV G LG F ++
Sbjct: 547 RIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSV 606
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
PI G + AS + + A L ++ L+RR A ++ +L KTE V+ +T
Sbjct: 607 PITVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVE 666
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q+ Y + S V + + G N+ G I ++K+CNHPDL+ E
Sbjct: 667 QRSTYRAFLASSEVEQILDGNRNSLYG------IDVMRKICNHPDLL-----------ER 709
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ Y +SGK+ V+ +L V K +++L S Q LD+ E
Sbjct: 710 EHSHQNPDYGNPERSGKM--------KVVAEVLKVWKQQGH-RVLLFSQTQQMLDILESF 760
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDP 593
Y Y R+DG +K+R +++ FN + + F+F+L++K GG G NL GANR+++FDP
Sbjct: 761 LVANEYSYRRMDGLTPVKQRMALIDEFNNSDDVFVFVLTTKVGGLGTNLTGANRVIIFDP 820
Query: 594 DWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVA 653
DWNP+ND QA R WR GQKK VYR ++ G+IEEK+ RQ +K L++ ++ +
Sbjct: 821 DWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ-R 879
Query: 654 RHFSMSELRSLFQLEENTISD 674
R F +++ LF L+++ S+
Sbjct: 880 RFFKARDMKDLFILKDDGDSN 900
>gi|395519787|ref|XP_003764023.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1197
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 169/565 (29%), Positives = 291/565 (51%), Gaps = 66/565 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q + + +
Sbjct: 96 LHDRLFEHQKEGVAFLYSLYKERR----KGGILADDMGLGKTVQILAFLSAMFD-----A 146
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L+ +++ P+SL+ W E KW G RVA G SK E LN + G
Sbjct: 147 ELVRFVLLIMPTSLISTWTKEFDKWTPGMRVATF--HGSSKNERIRNLNRIQRNNG---- 200
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ + +Y+ ++ S L E ++ DE H++K+ +++ A + K R+L
Sbjct: 201 --VAITTYQMLVNNWQQLSQLDGKEFVWDYLILDEAHKIKSSSTKSSIAARAIPVKNRIL 258
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT++ F+ +YE PI R ++ A+ E+ +
Sbjct: 259 LTGTPIQNNLYELWSLFDFACQGSLLGTSKTFKIEYENPITRAREKDATPGEKVLGLKIS 318
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ ++ +RRT + K +L K E ++ + +
Sbjct: 319 ENLMALIKPYFLRRTKEDIQKKSTNKPLRNLPEKNLDDDIIYEIPFLSRKNELIIWVYLV 378
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK------IQ 465
LQ+E+Y + + +++ + + L+ +T LKKLC+HP L+ + ++
Sbjct: 379 PLQEEIYRKFLSLNHIKQLLMETH------SPLAELTVLKKLCDHPRLLSARACSLLGLK 432
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD--KIVLVSNY 523
G E+ + + + L++ S K++ L +A++K D+ + ++ S
Sbjct: 433 EGNFSGEDESQMAHSNIQIDQVPHESLMQESGKVIFL---MALLKRLQDEGHQTLVFSQS 489
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
+ LD+ E L K +K +R+DG++T + +R + ++ F ++ + +F+L+S+ GG GL L
Sbjct: 490 RKLLDIIEHLLKKENFKTLRIDGTVTHLSERQRRIDLFQQSQDVSVFLLTSQVGGLGLTL 549
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A R+++FDP WNPA D QA+ RV+R GQK+ VYR +S G++EEK+ +RQ K +L
Sbjct: 550 TSATRVIIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLISCGTVEEKIYRRQVFKDSLI 609
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+++ AR+FS ELR LF +
Sbjct: 610 RQTTGDQKNPARYFSKQELRELFTI 634
>gi|384250118|gb|EIE23598.1| hypothetical protein COCSUDRAFT_47361 [Coccomyxa subellipsoidea
C-169]
Length = 1246
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 167/513 (32%), Positives = 269/513 (52%), Gaps = 50/513 (9%)
Query: 140 DPVLSNILRPHQREGVKFM-YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQG 198
D + + LR +Q EG+ ++ Y + CI+ADEMGLGKT+QC++ + L
Sbjct: 119 DFLRAGQLRDYQLEGLNWLIYSWMQN------NNCILADEMGLGKTIQCVSFIGYLSLWQ 172
Query: 199 PLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM--QTY 256
+A P + +V P S V NW E KWL + AL G SK+ + F +
Sbjct: 173 QIAGPYL----VVVPLSTVPNWIREFRKWLP-QCNALVYVGDSKSREVIRAFEFYTGKRS 227
Query: 257 GRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
GR +L+ ++E A+VL + + ++ DE HRLKN ES Y+ L + K ++L
Sbjct: 228 GRMYKFDVLITTFELVLKDAAVLSEIKWSYLVVDEAHRLKNNESALYRELATWQFKNKLL 287
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
++GTP+QN + E ++L+HF+ A++F ++ K E L
Sbjct: 288 VTGTPLQNSMKELWALLHFLEPSKFPNAEDFDARHSL----------------KKAEELT 331
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGG 434
QL + L+RR + K LP K E+++ + M+ LQK+ Y ++ + + + KGG
Sbjct: 332 QLHTELRPHLLRRVIKDVEKSLPPKNERILRVAMSPLQKQYYKWILTRNFKELNKGTKGG 391
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
L L+ IT LKK CNHP L FE+A + S +L +
Sbjct: 392 GQISL----LNIITELKKCCNHPFL-----------FESAESDFRGSNDDSKAVDRLTVS 436
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
+ K+++LD ++ +K T ++++ S + LD+ +LRG+++ RLDGS +R
Sbjct: 437 -AGKMVLLDKLMRRLK-ETGHRVLIFSQMVRMLDIISDYMRLRGFQHQRLDGSTPAAQRH 494
Query: 555 KVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQK 613
+ +E FN S +F F+LS++AGG G+NL A+ +++FD DWNP ND QAM+R R GQ
Sbjct: 495 QAMEHFNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQT 554
Query: 614 KPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
+ +YRFL++GS+EE +++R K L V+
Sbjct: 555 ETVNIYRFLTSGSVEEDILERAKQKMVLDHLVI 587
>gi|298705975|emb|CBJ29096.1| SNF2 family protein [Ectocarpus siliculosus]
Length = 1288
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 286/576 (49%), Gaps = 49/576 (8%)
Query: 122 AHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGL 181
D L + ++ +++D ++ L QR GV++M++ G I+ DEMGL
Sbjct: 394 GEDSLSANSAELGDGLILDDGIAQRLFQFQRTGVRWMWQL-----HRQGAGGIVGDEMGL 448
Query: 182 GKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAAL----- 235
GKT+Q + L ++ +A+I+ P++++ +W E+ W RV L
Sbjct: 449 GKTVQVSAFLGALH-----GSSVMRRALILCPATVLSHWMAELHIWAPQLRVVVLHRCVQ 503
Query: 236 ---PIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEG 292
+ G S KL + ++ P ++V SYE +S + L + DEG
Sbjct: 504 AFNAVSGNS-----GKLRALIRRILGWP-EVVVVASYEGMKSLKAFLLPCNWDYCVLDEG 557
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
R++N +++ ++ R++L+GTPIQN+L E +SL FV G LGT F ++
Sbjct: 558 QRIRNPDAEVTLICKQIRTVHRLILTGTPIQNNLRELWSLFDFVFPGRLGTLPAFEAEFA 617
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK--YLPVKTEQVVCIKM 410
PI G + AS + A L ++ L+RR L +LP KTEQV+ ++
Sbjct: 618 NPIRVGGYANASPMQARLAYRCALVLRDLIQPYLLRRQKKDLEDIIHLPAKTEQVLFCRL 677
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVM---DKIQT- 466
T Q+ LY+ ++S V+ + M A +I L+KLCNHPDLV D + T
Sbjct: 678 TSYQRRLYSEFLESTEVKSVLS------RTMRAFRAIGILRKLCNHPDLVCRFGDSVVTR 731
Query: 467 -------GADGFENAMNILPTGYAASYKS-GKLLIELSAKLMVLDTMLAVIKMTTDDKIV 518
G D +A A KS ++ S KL+VL +L + +++
Sbjct: 732 LASHQIWGGD--SDASEKEEDDTAEESKSDNDHEVQRSGKLLVLQQILPLWH-KQGHRVL 788
Query: 519 LVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGC 578
L S Q L + ER + Y RLDGS + R +++ FN + FI +L+++ GG
Sbjct: 789 LFSQTRQMLSIIERFVVNNEWSYGRLDGSTPVGNRQTLIDRFNNDESMFIMLLTTRTGGV 848
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NL GA+R+++FDPDWNP+ D QA R WR GQ++ VYR ++ G+IEEK+ RQ K
Sbjct: 849 GVNLTGADRVILFDPDWNPSTDMQARERSWRVGQRRQVTVYRLVTAGTIEEKIYHRQIFK 908
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEENTISD 674
AL++ V+ + R FS EL LF L ++ SD
Sbjct: 909 TALTNRVLQ-DPKQRRMFSADELGDLFTLGDDGASD 943
>gi|383861226|ref|XP_003706087.1| PREDICTED: DNA excision repair protein ERCC-6-like [Megachile
rotundata]
Length = 1127
Score = 252 bits (643), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 163/509 (32%), Positives = 265/509 (52%), Gaps = 29/509 (5%)
Query: 172 GCIMADEMGLGKTLQCITLMW-----TLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
G ++ DEMGLGKT+Q I + LL G + L I++ P++L++ W +
Sbjct: 345 GGLLGDEMGLGKTVQVIAFLAGLDCSELLSDGGRFRGL-GPTIVICPATLMEQWVKHFHE 403
Query: 227 WLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVG 285
W RV L G +++ ++S +Q G ILV SY + +H +L E
Sbjct: 404 WWPILRVVVLHQSGSYNGDLEYLIHS-LQCGG------ILVTSYSSMLNHKQILVSAEWH 456
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
V+ DEGH+++N +++ +A+ R+LL+G+P+QN L E +SL F+ G LGT
Sbjct: 457 YVILDEGHKIRNPQAKVSKAVKEFSTPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLP 516
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY--LPVKTE 403
F + PI RG + AS + A L + ++RRT + + LP K E
Sbjct: 517 AFLEHCAGPITRGGYANASPLQEATALHVATMLRDAITPYMLRRTKQDVQHHVSLPEKNE 576
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTM---KGGENTKLGMTALSSITSLKKLCNHPDLV 460
QV+ +T+ QK+LY + S+ V + K E + L ++++L+K+CNHPDL
Sbjct: 577 QVLFCSLTEEQKKLYKKYLCSEDVSFVLHEKKYVETGRYRARLLIALSALRKICNHPDLF 636
Query: 461 MDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLV 520
+ +D N + +SGK++ V+ ++L + K + +L
Sbjct: 637 VYSTPLDSDEDINMSEESLETFGYWKRSGKMI--------VVQSLLKIWK-KQGHRALLF 687
Query: 521 SNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
+ Q + + E L + Y Y+R+DG+ + +R + + FN S+ F+F+L+++ GG G+
Sbjct: 688 TQGRQMMHILESLVQHEKYSYLRMDGTTPMSQRQETIRLFNDDSSYFVFLLTTRVGGLGV 747
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NL GANR++++DPDWNPA D QA R WR GQ K +YR ++ G+IEEK+ RQ K
Sbjct: 748 NLTGANRVIIYDPDWNPATDAQARERAWRIGQSKNVTIYRLITAGTIEEKIYHRQIFKVL 807
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEE 669
LS+ V++ + R F S+L LF E
Sbjct: 808 LSNKVLE-DPRQRRLFKTSDLVELFNFNE 835
>gi|297744167|emb|CBI37137.3| unnamed protein product [Vitis vinifera]
Length = 1116
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 267/526 (50%), Gaps = 49/526 (9%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ GV++++E G I+ DEMGLGKT+Q ++ + L + KP +I
Sbjct: 404 YQKVGVQWLWELHC-----QQVGGIIGDEMGLGKTIQVLSFLGAL-HFSNMYKP----SI 453
Query: 210 IVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEI---DNKLNSFMQTYGRRPVNPILV 266
++ P +L++ W E KW + + + S + D+ +N + R + +L+
Sbjct: 454 VICPVTLLRQWKREAKKWYQNSLDSDDEENLSSKDTKKWDSLINRVL-----RSQSGLLI 508
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+YE R A L + G + DEGHR++N ++ L+ R++++G PIQN L
Sbjct: 509 TTYEQIRLQAGKLLDIKWGYAILDEGHRIRNPNAEVTILCKQLQTVHRIIMTGAPIQNKL 568
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E +SL FV G LG F ++ PI G + A+ + + A L ++ L
Sbjct: 569 AELWSLFDFVFPGKLGVLPVFEAEFAVPISVGGYANATPLQVSTAYRCAVVLRDLIMPYL 628
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RR A ++ LP KTE V+ +T Q+ +Y + S V + G N+ G
Sbjct: 629 LRRMKADVNAQLPNKTEHVLFCSLTTEQRSVYRAFLASSEVEQIFDGSRNSLYG------ 682
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
I ++K+CNHPDL+ + ++N Y +SGK+ + +
Sbjct: 683 IDVMRKICNHPDLLERE-----HAYQNP------DYGNPERSGKMKV-----------VA 720
Query: 507 AVIKMTTDD--KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
V+K + +++L + Q LD+ E GY Y R+DG IK R +++ FN +
Sbjct: 721 HVLKGWKEQGHRVLLFAQTQQMLDILENFLIAGGYVYRRMDGFTPIKHRMALIDEFNDSD 780
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+ FIF+L++K GG G NL GANR++++DPDWNP+ D QA R WR GQ + VYR ++
Sbjct: 781 DVFIFILTTKVGGLGTNLTGANRVIIYDPDWNPSTDMQARERAWRIGQTRDVTVYRLITR 840
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEEN 670
G+IEEK+ QRQ +K L++ ++ + R F +++ LF L ++
Sbjct: 841 GTIEEKVYQRQIYKHFLTNKILKNPQQ-KRFFKARDMKDLFVLNDD 885
>gi|238494328|ref|XP_002378400.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
gi|220695050|gb|EED51393.1| SNF2 family helicase/ATPase, putative [Aspergillus flavus NRRL3357]
Length = 1663
Score = 251 bits (642), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 292/570 (51%), Gaps = 74/570 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-- 194
+ +DP + ++PHQ G++FM+ + + E+ GC++A MGLGKT+Q I+L+ T+
Sbjct: 846 IYLDPQIGLRVKPHQLNGIQFMWREL--IEDENKQGCLLAHTMGLGKTMQVISLLATISA 903
Query: 195 --------LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI----DGGSK 242
+RQ A +++I+ PSSL++NW E W + P+ +
Sbjct: 904 AASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPLRKITTSATM 963
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRS---------HASVLHKNEVG-------- 285
E ++ + + G +L++SY+ FR+ L+ N+ G
Sbjct: 964 PERLQEVCDWNEEGG------VLIMSYDIFRTWILNRETNKRGKPLNDNDYGKVRDCLLE 1017
Query: 286 ---LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
+++ DE H++KN + QA M ++K R+ L+G+P+ N+L++Y+++++++ +G LG
Sbjct: 1018 GPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIAEGYLG 1077
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
EF+ ++ PI G ++ ER ++ +L+ L I+ + R ++L+ LP K
Sbjct: 1078 EFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGSLPTKV 1137
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
E V+ + +TDLQK+ Y D+ T+ G+ S + L CNHP D
Sbjct: 1138 EFVITVPLTDLQKQAY------DSYVETILQGKGAFGSAQLWSWLAILSLCCNHPSCFRD 1191
Query: 463 KIQTGADGFE------NAMNILP----TGYAASYKSGKLL---------------IELSA 497
K+ + A+ + + M ++P A S KL+ +E+S
Sbjct: 1192 KLLSRANDAQKINKRLDEMEMIPGDEPIAQAGLPDSEKLVSEQEQIFAKVPDIKALEMSH 1251
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
+ ++++++ + DKI++ S+ TLD E + + KY RLDG + R
Sbjct: 1252 RARIMNSIIDE-SIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDAT 1310
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+ FN S + ++++S++AGG GLN+ GANR+++FD ++P ++QA+ R +R GQ+KP F
Sbjct: 1311 KRFNLGSEKQVYLISTRAGGLGLNIPGANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVF 1370
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
VYRF++ G+ EE M + K L+ VVD
Sbjct: 1371 VYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1400
>gi|323454552|gb|EGB10422.1| hypothetical protein AURANDRAFT_10276, partial [Aureococcus
anophagefferens]
Length = 505
Score = 251 bits (642), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 263/533 (49%), Gaps = 53/533 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L PHQR V +++ + G + G I+ DEMGLGKT Q + L GP D
Sbjct: 16 LFPHQRRAVSWLW-ALHG----EGCGGIVGDEMGLGKTAQVGAFL-GALADGPRGPDRFD 69
Query: 207 ---KAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
A+I+AP++++ +W E+ W RV L S A D P
Sbjct: 70 VCRSALILAPTTMLSHWVRELHAWAPRARVVVLHR---SSARFDE---------AETPSC 117
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
+ V SY+ A L + DEG +L+N +S+ Q L+ RR+LLSGTP+
Sbjct: 118 VLCVASYDAVHRLADALLAVPWSYAVLDEGQKLRNPDSRVTQLCKRLRTPRRLLLSGTPV 177
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN L E +SL F G LGT + F ++ PI G + A A+ A L ++
Sbjct: 178 QNSLRELWSLFDFAVPGRLGTLKAFDQELAQPIRAGGFAGARPAQVQLAYRCAVALRDLI 237
Query: 383 NRCLIRRTSALLSKY------LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L+RRT A L+ LP KTE V+ ++ Q +LY +++ D VR+ + G
Sbjct: 238 QPYLLRRTKAALTAAGDSGVALPPKTEHVLLCALSQDQIDLYRHVLDGDDVRKALAGDGG 297
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
+ TA +I +L+K+CNHPDL + AAS S
Sbjct: 298 QQ--ATAFRAIAALRKICNHPDLYGGPPEG------------EPPGAASR---------S 334
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
+KL LD +L K ++++ S LD+ E L RG++Y R+DG R
Sbjct: 335 SKLAALDAVLVRWK-AQGHRVLVFSQTIAMLDVLEALVVARGWRYGRMDGGTAPAARQAT 393
Query: 557 VETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
+ FN +S F+ +L+++ GG GL+L+GA+R+V++DPDWNP D QA R WR GQ KP
Sbjct: 394 ADAFNASSKTFLMLLTTRTGGVGLSLVGADRVVLYDPDWNPQTDAQARERSWRLGQTKPV 453
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
+YR + G+IEEK+ RQ K+AL++ V+ + R FS SEL LF L +
Sbjct: 454 TIYRLVCAGTIEEKIYHRQIFKQALTNKVLS-DAKQRRLFSQSELGELFTLGD 505
>gi|328783971|ref|XP_001120586.2| PREDICTED: DNA excision repair protein ERCC-6-like [Apis mellifera]
Length = 1134
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 280/534 (52%), Gaps = 34/534 (6%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW-----TLLRQGPLA 201
L +Q+ V++++E +R + G ++ DEMGLGKT+Q I + LL G
Sbjct: 323 LYKYQKISVQWLWEL--HLR---SLGGLLGDEMGLGKTVQVIAFLAGLDCSELLSDGGRF 377
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
+ L II+ P++L++ W +W R+ L G ++ ++S +++ G
Sbjct: 378 RGL-GPTIIICPATLMEQWVKHFHEWWPILRIVVLHQSGTYNGNLEYLIHS-LKSGG--- 432
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
I++ SY H +L N+ V+ DEGH+++N +++ +A+ R+LL+G+
Sbjct: 433 ---IIITSYSGMLKHKDLLVSNQWHYVILDEGHKIRNPQAKVSKAVKEFSTPHRLLLTGS 489
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN L E +SL F+ G LGT F + PI RG + A+ + A + L
Sbjct: 490 PMQNSLKELWSLFDFILPGKLGTLPAFLEHCAGPITRGGYANATPLQEATALQVAMMLRD 549
Query: 381 IVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM---KGGE 435
+ ++RRT + + LP K EQV+ +T+ QK+LY ++S V + E
Sbjct: 550 AITPYMLRRTKNDVQHHVSLPEKNEQVLFCSLTEEQKKLYKKYLRSTDVSFILHEKNNIE 609
Query: 436 NTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL 495
N K L ++++L+K+CNHPDL + +D + + + SGK++
Sbjct: 610 NGKYRARLLIALSALRKICNHPDLYLYTTPIDSDEDIDISDETLEKFGYWKHSGKMI--- 666
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
V+ ++L + K +++L + Q + + E L + Y Y+R+DG+ + R +
Sbjct: 667 -----VVRSLLKIWK-KQGHRVLLFTQGRQMMHILESLIQNEQYTYLRMDGTTPMSHRQE 720
Query: 556 VVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
+ +FNK S+ FIF+L+++ GG G+NL GANR+V++DPDWNPA D QA R WR GQ K
Sbjct: 721 TIRSFNKDSSYFIFLLTTRVGGLGVNLTGANRVVIYDPDWNPATDAQARERAWRIGQNKN 780
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
+YR ++ G+IEEK+ RQ K LS+ V++ + R F ++L LF E
Sbjct: 781 VTIYRLITAGTIEEKIYHRQIFKILLSNKVLE-DPRQRRLFKTNDLVELFNFNE 833
>gi|255577952|ref|XP_002529848.1| DNA repair and recombination protein RAD26, putative [Ricinus
communis]
gi|223530676|gb|EEF32549.1| DNA repair and recombination protein RAD26, putative [Ricinus
communis]
Length = 1230
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/555 (30%), Positives = 270/555 (48%), Gaps = 71/555 (12%)
Query: 147 LRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
L +Q+ GV++++E C G I+ DEMGLGKT+Q ++ + L + KP
Sbjct: 400 LFEYQKVGVQWLWELHCQRA-------GGIIGDEMGLGKTIQVLSFLGAL-HFSNMYKP- 450
Query: 205 IDKAIIVAPSSLVKNWCNEITKWL-----------------GGRVAALPIDGGSKAEID- 246
+I++ P +L++ W E KW G R + D S+ +D
Sbjct: 451 ---SIVICPVTLLRQWKREAEKWYPRFHVELLHDSAQDLPHGKRAKSFDSDNESEGSLDS 507
Query: 247 -----------NKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRL 295
NK +S + + +L+ +YE R L E G + DEGHR+
Sbjct: 508 DYEGNISSKKANKWDSLINRVLKSEAG-LLITTYEQLRLLGEKLLDIEWGYAVLDEGHRI 566
Query: 296 KNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPI 355
+N ++ L+ R++++G PIQN L E +SL FV G LG F ++ PI
Sbjct: 567 RNPNAEVTLICKQLQTVHRIIMTGAPIQNKLSELWSLFDFVFPGKLGVLPVFEAEFAVPI 626
Query: 356 LRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQK 415
G + AS + + A L ++ L+RR ++ LP KTE V+ +T Q+
Sbjct: 627 SVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKVDVNAQLPKKTEHVLFCSLTAEQR 686
Query: 416 ELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAM 475
+Y + S V + + G N+ G I ++K+CNHPDL+ E
Sbjct: 687 SVYRAFLASTEVEQIIDGSRNSLYG------IDVMRKICNHPDLL-----------EREH 729
Query: 476 NILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSK 535
+ Y +SGK+ V+ +L V + +++L + Q LD+ E
Sbjct: 730 SCQNPDYGNPDRSGKM--------RVVAQVLKVWR-EQGHRVLLFAQTQQMLDILEIFLN 780
Query: 536 LRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
GY Y R+DG IK+R +++ FN +++ FIF+L++K GG G NL GANR+++FDPDW
Sbjct: 781 SGGYSYRRMDGLTPIKQRMALIDEFNNSNDVFIFILTTKVGGLGTNLTGANRVIIFDPDW 840
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NP+ D QA R WR GQK+ VYR ++ G+IEEK+ RQ +K L++ ++ + R
Sbjct: 841 NPSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ-RRF 899
Query: 656 FSMSELRSLFQLEEN 670
F +++ LF L ++
Sbjct: 900 FKARDMKDLFTLNDD 914
>gi|159126293|gb|EDP51409.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus A1163]
Length = 1827
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 288/567 (50%), Gaps = 69/567 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ +DP + ++PHQ G++FM+ + ++ E GC++A MGLGKT+Q I+L+ T+
Sbjct: 987 IYLDPHIGQRVKPHQLNGIQFMWREL--IQDEKQQGCLLAHTMGLGKTMQVISLLDTISA 1044
Query: 197 QGPLAKPLIDKAI----------IVAPSSLVKNWCNEITKWLG--GRVAALPIDGGSKAE 244
P I + + I+ PSSL+ NW E W R+ L S
Sbjct: 1045 AAASNDPKISEQVPECFHRSQTLILCPSSLIDNWYEEFLMWTPEESRIGPLRKVTASMIA 1104
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFR------------------SHASVLHKNEVG- 285
+ +L + + + IL++SY+ FR HA+V G
Sbjct: 1105 VSERLRE-VSDWDKE--GGILIMSYDIFRKWIHNKETKKMDKPLRDDEHANVKKWLLEGP 1161
Query: 286 -LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
+++ DE H++KN S +A + ++K R+ L+G+P+ N+L +YF++V ++ +G LG
Sbjct: 1162 NIIVADEAHKMKNSSSGISRAAVQFRSKSRIALTGSPLANNLTDYFTMVDWIAKGYLGEF 1221
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
EF Y PI G ++ ER K+ ++L+ L I+ + R +L +P K E
Sbjct: 1222 PEFNANYVEPIEEGLYVDSTHYERRKSLKKLQVLKEILEPKVNRAAITVLEGDMPPKVEF 1281
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN-HPDLVMDK 463
V+ + +T+LQ+ Y + + S ++G T++G L + ++ LCN HP DK
Sbjct: 1282 VITVPLTELQRAAYDSYVDS-----VVQG--KTEVGTAKLWTWMAILGLCNNHPACFRDK 1334
Query: 464 IQTGADGFENAMNIL--------PTGYAASYKSGKLLIE---------------LSAKLM 500
+ + A+ ++A + L P A S KL+ E LS +
Sbjct: 1335 LLSRANEAQSAGSSLDEMLPGDEPITQAGIPDSEKLVSEQERLFANVPDMNALNLSYRAQ 1394
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +++ + DK+++ S+ TL+ E + K+ Y RLDG I R ++F
Sbjct: 1395 LLDRIISE-SIKAGDKVLVFSHSIPTLNYVEHVLKISKRSYRRLDGKTPISTRQAATKSF 1453
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N S+E ++++S++AGG GLN+ GANR+V+FD +NP ++QA+ R +R GQ+KP FVYR
Sbjct: 1454 NTVSDEKVYLISTRAGGLGLNIPGANRVVIFDFSFNPIWEEQAVGRAYRLGQQKPVFVYR 1513
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVD 647
F++ G+ EE + + K L+ VVD
Sbjct: 1514 FIAGGTFEEIIYNKAIFKTQLAVRVVD 1540
>gi|444319130|ref|XP_004180222.1| hypothetical protein TBLA_0D01950 [Tetrapisispora blattae CBS 6284]
gi|387513264|emb|CCH60703.1| hypothetical protein TBLA_0D01950 [Tetrapisispora blattae CBS 6284]
Length = 1177
Score = 251 bits (640), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 271/542 (50%), Gaps = 74/542 (13%)
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKW---- 227
G I+ DEMGLGKT+Q I + +L L P+I IV P++++K WC EI KW
Sbjct: 397 GGIIGDEMGLGKTIQIIAFLASLHHSNLLNGPII----IVCPATVMKQWCAEIHKWWPPF 452
Query: 228 ----LGGRVAALPID---------------------------GGSKAEIDNKLNSFMQTY 256
L A + I+ SK + + + S + T
Sbjct: 453 RTIILHSIGAGMLINKKKMSEEEMENIIINSNPNEFTYEDFRNSSKIKTETETKSAIDTL 512
Query: 257 GRRPVNP--ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
+ +N I++ +Y R HA L K + DEGH+++N +S+ +K R
Sbjct: 513 VEKVINDGHIIITTYVGLRIHAESLLKVNWDYAILDEGHKIRNPDSEISLTCKKIKTYNR 572
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
++LSGTPIQN+L E +SL F+ G LGT F++Q+ PI G + A++ + +
Sbjct: 573 IILSGTPIQNNLNELWSLFDFIYPGKLGTLPVFQQQFVGPINVGGYANATNIQVQTGYKC 632
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L +++ L+RR A ++K LP K E V+ K+T+ Q++ Y + S + + +G
Sbjct: 633 AIALRNLISPYLLRRVKADVAKDLPKKKEMVLFCKLTEYQRKKYIEFLNSRELEQIKRGK 692
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
G I L+K+CNHPD++ K + + Y +SGK+
Sbjct: 693 RQVLFG------IDILRKICNHPDILDCKEEEKRQSIQ---------YGDPKRSGKM--- 734
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL-----SKLRGYKYVRLDGSMT 549
V+ T + ++ + K +L + Q LD+ E L+G KY+R+DG+ +
Sbjct: 735 -----QVVQTTTSFVE-EKNYKTLLFTQSRQMLDILEEFISYKDKDLQGIKYLRMDGTTS 788
Query: 550 IKKRAKVVETFNKTSNEF----IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMA 605
I R +V+ FN ++ +F+L+++ GG G+NLIGANR+++FDPDWNP+ D QA
Sbjct: 789 ISIRQTLVDKFNNDNDRDDNIDLFLLTTRVGGLGVNLIGANRIIIFDPDWNPSTDLQARE 848
Query: 606 RVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLF 665
R WR GQK+ +YR + G+IEEK+ RQ K+ L++ ++ + R F M EL LF
Sbjct: 849 RAWRIGQKREVSIYRLMINGTIEEKIYHRQIFKQFLTNKILLNDIKQKRFFKMHELHDLF 908
Query: 666 QL 667
L
Sbjct: 909 TL 910
>gi|440297057|gb|ELP89787.1| CHD3-type chromatin-remodeling factor PICKLE, putative [Entamoeba
invadens IP1]
Length = 1343
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 163/510 (31%), Positives = 263/510 (51%), Gaps = 63/510 (12%)
Query: 147 LRPHQREGVKFM-YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
LR +Q EGV ++ Y V + I+ADEMGLGKT+Q IT + L + P
Sbjct: 380 LRDYQIEGVNWLTYAFSKNVNV------ILADEMGLGKTIQTITFLRHLYDKCNYVGP-- 431
Query: 206 DKAIIVAPSSLVKNWCNEITKWLGGRVAALPI--DGGSKAEIDNKLNSFMQTYGRRPVNP 263
++V P S + NW E KW R+ + DG S+A I + M++ ++P
Sbjct: 432 --HLVVVPLSTINNWAKEFAKW-APRMNCIVYTGDGESRAIIRK---TEMESTSKKPKFN 485
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
+L+ ++E +L+ G + DE HRLKN E Q Y+AL+ L + ++L++GTP+Q
Sbjct: 486 VLLTTFELVIKDQGLLNLYHWGYLAVDEAHRLKNAEGQLYEALLNLHTECKLLITGTPLQ 545
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVN 383
N L E +SL+HF++ ++F K + + A E L++ +
Sbjct: 546 NTLKELWSLLHFLHPEQFPNFEDFEKTH----------------KVNAAEELQKFHSELK 589
Query: 384 RCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGGENTKLGM 441
++RR + K LP K E+++ + ++ LQK+ Y +I + A+++ +K + M
Sbjct: 590 PYILRRMKKEVEKSLPPKKERILRVGLSGLQKQYYRWIITKNESALKKAVK-----QQKM 644
Query: 442 TALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMV 501
+ ++ + LKKLCNHP L+ I G LIE K+++
Sbjct: 645 SLMNIMIELKKLCNHPLLINQSISYDEQG---------------------LIESCGKMVL 683
Query: 502 LDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN 561
LD +L +K ++++ S + LD+ K RG+ Y RLDGSM + R + +E FN
Sbjct: 684 LDKLLVELK-KDGHRVLIFSQMVRMLDILAEYMKKRGFSYQRLDGSMGKEPRQRAMEQFN 742
Query: 562 -KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
K S +F F+LS++AGG G+NL A+ ++++D DWNP ND QA AR R GQ+K +YR
Sbjct: 743 AKDSRDFCFLLSTRAGGLGINLTSADTVIIYDSDWNPQNDLQAQARCHRIGQEKMVNIYR 802
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
++ GS+EEK++ K L V+ E
Sbjct: 803 LVTEGSVEEKILMSAKKKMVLDHLVIQTME 832
>gi|397610434|gb|EJK60831.1| hypothetical protein THAOC_18757 [Thalassiosira oceanica]
Length = 486
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/315 (43%), Positives = 187/315 (59%), Gaps = 35/315 (11%)
Query: 398 LPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHP 457
L + QVVC +T++Q+ +Y +L S ++ ++G + + L SI L KLCNHP
Sbjct: 4 LSCRLVQVVCCNLTEIQQNMYQHLCTSKDMQHVLEGKQ-----VNCLGSIQMLMKLCNHP 58
Query: 458 DLVMD-------------------------KIQTGADGFENAMNILPTGYAASYKSGKLL 492
LV+D + + A G +P ++ ++
Sbjct: 59 SLVVDGDSSRNNNIGGRSGRNKKKVCYAEEEKSSAAPGANGIAKFMPYEAMGGGRNAPVM 118
Query: 493 IELSAKLMVLDTMLAVIKMTTD--DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTI 550
ELS K+ VL ++ ++ + DKIV+VSNYTQTLDL R+ + + + RLDGS+++
Sbjct: 119 PELSGKMFVLWRLMREMRKPGNGGDKIVIVSNYTQTLDLIGRMCRENSWGFCRLDGSISM 178
Query: 551 KKRAKVVETFNKTSNEFI-FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
KKR K+ + FN S+ I F+LSSKAGGCGLNLIG NRLV+FDPDWNPA D QA AR WR
Sbjct: 179 KKRQKMCDEFNDPSSSLIAFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAVDKQAAARCWR 238
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
DGQKK CF YRF++TG++EEK+ QRQ K+ L S V D E+ S +LR+LF+L
Sbjct: 239 DGQKKRCFTYRFMATGTVEEKIFQRQLSKEGLQSVVDDKEQ--VNALSTKDLRNLFKLRT 296
Query: 670 NTISDTHDKIKCSRC 684
T SDTHDK+KC RC
Sbjct: 297 GTPSDTHDKLKCERC 311
>gi|145359958|ref|NP_178970.3| chromatin remodeling 5 [Arabidopsis thaliana]
gi|330251136|gb|AEC06230.1| chromatin remodeling 5 [Arabidopsis thaliana]
Length = 1724
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 158/512 (30%), Positives = 273/512 (53%), Gaps = 50/512 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
++ LR +Q EG+ F+ + I+ADEMGLGKT+Q ++++ L +
Sbjct: 620 LIGGTLRDYQLEGLNFLVNSWL-----NDTNVILADEMGLGKTVQSVSMLGFLQNTQQIP 674
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + +V P S + NW E KWL G + + + E+ + + + RP+
Sbjct: 675 GPFL----VVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPI 730
Query: 262 N-PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
L+ +YE +VL K + ++ DE HRLKN E+Q Y AL+ K ++L++GT
Sbjct: 731 KFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGT 790
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN + E ++L+HF++ G EF + Y+ + +S E AN LE
Sbjct: 791 PLQNSVEELWALLHFLDPGKFKNKDEFVENYK--------NLSSFNESELANLHLE---- 838
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGGENTK 438
+ ++RR + K LP K E+++ ++M+ LQK+ Y +++ + + + ++G +
Sbjct: 839 -LRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ--- 894
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL--- 495
++ L+ + LKK CNHP L FE+A + GY L ++
Sbjct: 895 --VSLLNIVVELKKCCNHPFL-----------FESADH----GYGGDINDNSKLDKIILS 937
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S KL++LD +L ++ T ++++ S + LD+ LRG+++ RLDGS + R +
Sbjct: 938 SGKLVILDKLLVRLR-ETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQ 996
Query: 556 VVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
++ FN S++F F+LS++AGG G+NL A+ +V+FD DWNP ND QAM+R R GQ++
Sbjct: 997 AMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQE 1056
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
+YRF+++ S+EE++++R K L V+
Sbjct: 1057 VVNIYRFVTSKSVEEEILERAKRKMVLDHLVI 1088
>gi|70998502|ref|XP_753973.1| SNF2 family helicase/ATPase [Aspergillus fumigatus Af293]
gi|66851609|gb|EAL91935.1| SNF2 family helicase/ATPase, putative [Aspergillus fumigatus Af293]
Length = 1827
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/567 (29%), Positives = 289/567 (50%), Gaps = 69/567 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ +DP + ++PHQ G++FM+ + ++ E GC++A MGLGKT+Q I+L+ T+
Sbjct: 987 IYLDPHIGQRVKPHQLIGIQFMWREL--IQDEKQQGCLLAHTMGLGKTMQVISLLDTISA 1044
Query: 197 QGPLAKPLIDKAI----------IVAPSSLVKNWCNEITKWLG--GRVAALPIDGGSKAE 244
P I + + I+ PSSL+ NW E W R+ L S
Sbjct: 1045 AAASNDPKISEQVPECFHRSQTLILCPSSLIDNWYEEFLMWTPEESRIGPLRKVTASMIA 1104
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFR------------------SHASVLHKNEVG- 285
+ +L + + + IL++SY+ FR HA+V G
Sbjct: 1105 VSERLRE-VSDWDKE--GGILIMSYDIFRKWIHNKETKKMDKPLRDDEHANVKKWLLEGP 1161
Query: 286 -LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
+++ DE H++KN S +A + ++K R+ L+G+P+ N+L +YF++V ++ +G LG
Sbjct: 1162 NIIVADEAHKMKNSSSGISRAAVQFRSKSRIALTGSPLANNLTDYFTMVDWIAKGYLGEF 1221
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
EF+ Y PI G ++ ER K+ ++L+ L I+ + R +L +P K E
Sbjct: 1222 PEFKANYVEPIEEGLYVDSTHYERRKSLKKLQVLKEILEPKVNRAAITVLEGDMPPKVEF 1281
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN-HPDLVMDK 463
V+ + +T+LQ+ Y + + S ++G T++G L + ++ LCN HP DK
Sbjct: 1282 VITVPLTELQRAAYDSYVDS-----VVQG--KTEVGTAKLWTWMAILGLCNNHPACFRDK 1334
Query: 464 IQTGADGFENAMNIL--------PTGYAASYKSGKLLIE---------------LSAKLM 500
+ + A+ ++A + L P A S KL+ E LS +
Sbjct: 1335 LLSRANEAQSAGSSLDEMLPGDEPITQAGIPDSEKLVSEQERLFANVPDMNALNLSYRAQ 1394
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +++ + DK+++ S+ TL+ E + K+ Y RLDG I R ++F
Sbjct: 1395 LLDRIISE-SIKAGDKVLVFSHSIPTLNYVEHVLKISKRSYRRLDGKTPISTRQAATKSF 1453
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N S+E ++++S++AGG GLN+ GANR+V+FD +NP ++QA+ R +R GQ+KP FVYR
Sbjct: 1454 NTVSDEKVYLISTRAGGLGLNIPGANRVVIFDFSFNPIWEEQAVGRAYRLGQQKPVFVYR 1513
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVD 647
F++ G+ EE + + K L+ VVD
Sbjct: 1514 FIAGGTFEEIIYNKAIFKTQLAVRVVD 1540
>gi|119498439|ref|XP_001265977.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181]
gi|119414141|gb|EAW24080.1| SNF2 family helicase/ATPase, putative [Neosartorya fischeri NRRL 181]
Length = 1777
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 168/567 (29%), Positives = 287/567 (50%), Gaps = 69/567 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ +DP + ++PHQ G++FM+ + ++ E GC++A MGLGKT+Q I+L+ T+
Sbjct: 986 ISLDPHIGQRVKPHQLNGIQFMWREL--IQDEKQQGCLLAHTMGLGKTMQVISLLNTISA 1043
Query: 197 QGPLAKPLIDKAI----------IVAPSSLVKNWCNEITKWLG--GRVAALPIDGGSKAE 244
P I + + I+ PSSL+ NW E W R+ L S
Sbjct: 1044 AAASNDPKISEQVPECFHRSQTLILCPSSLIDNWYEEFLMWTPEESRIGPLRKVTASMIA 1103
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFR------------------SHASVLHKNEVG- 285
+ +L + + + IL++SY+ FR HA+V G
Sbjct: 1104 VSERLRE-VSDWDKE--GGILIMSYDIFRKWIHNKETKKMQKPLRDDEHANVKKWLLEGP 1160
Query: 286 -LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
+++ DE H++KN S +A + ++K R+ L+G+P+ N+L +YF++V ++ +G LG
Sbjct: 1161 NIIVADEAHKMKNSTSGISRAAVQFRSKSRIALTGSPLANNLTDYFTMVDWIAKGYLGEF 1220
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
EF+ Y P+ G ++ ER ++ ++L+ L I+ + R +L +P K E
Sbjct: 1221 PEFKANYVEPLEEGLYVDSTHYERRRSLKKLQVLKEILEPKVNRAAITVLEGDMPPKVEF 1280
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCN-HPDLVMDK 463
V+ + +T+LQ+ Y + + S ++G T++G L + ++ LCN HP DK
Sbjct: 1281 VITVPLTELQRAAYDSYVDS-----VVQG--KTEVGTAKLWTWMAILGLCNNHPACFRDK 1333
Query: 464 IQTGADGFENAMNIL--------PTGYAASYKSGKLLIE---------------LSAKLM 500
+ + A+ + A + L P A S KL+ E LS +
Sbjct: 1334 LLSRANEAQRAGSSLDEMLPGDEPITQAGIPDSEKLVSEQERLFANIPDMNALNLSYRAQ 1393
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +++ + DK+++ S+ TLD E + K+ Y RLDG I R ++F
Sbjct: 1394 LLDRIISE-SIKAGDKVLVFSHSIPTLDYVEHVLKISKRSYRRLDGKTPISTRQAATKSF 1452
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N S E ++++S++AGG GLN+ GANR+V+FD +NP ++QA+ R +R GQ+KP FVYR
Sbjct: 1453 NTVSEEKVYLISTRAGGLGLNIPGANRVVIFDFSFNPIWEEQAVGRAYRLGQQKPVFVYR 1512
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVD 647
F++ G+ EE + + K L+ VVD
Sbjct: 1513 FIAGGTFEEIIYNKAIFKTQLAVRVVD 1539
>gi|402587411|gb|EJW81346.1| hypothetical protein WUBG_07746 [Wuchereria bancrofti]
Length = 537
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 268/533 (50%), Gaps = 66/533 (12%)
Query: 179 MGLGKTLQCITLM----WTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLG-GRVA 233
MGLGKT+Q I+ + ++ L + + +I+ P++L++ W E W RVA
Sbjct: 1 MGLGKTVQVISFLRGLAFSCLEDRGFSFSGLGPVLIICPTTLIRQWLKEFRTWFPLCRVA 60
Query: 234 ALPIDG---GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
L G G A++ K+ R +L+ SY TF + L ++ D
Sbjct: 61 ILHSSGSFHGQSAQLIRKM------VISRSDGSVLLTSYGTFAKNRKHLVDKIWHYIILD 114
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGH+++N ++Q A+ ++ R++LSG+P+QN L E +SL+ FV G LG + F +
Sbjct: 115 EGHKIRNPDAQITLAVKEIRTPHRLILSGSPLQNSLRELWSLIDFVYPGRLGALKSFMDK 174
Query: 351 YETPILRGQDSCASDAERTKANE-----------------RLEQLIGIVNRCLIRRTSAL 393
+ PI +G + A+ + A + +++ IG ++R + R
Sbjct: 175 FSIPITQGGYANATAVQVRTAYKCACILRDLVSEDFIEEIYIKKCIGTLSRDFMERCDQS 234
Query: 394 LSK-----------YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMT 442
LS LP KTEQV+ +T Q++LY + S R + G M
Sbjct: 235 LSLKTLEKDVEMSIRLPTKTEQVLFCNITPCQRKLYEEYLSSRECDRILSGK------MD 288
Query: 443 ALSSITSLKKLCNHPDLVMDKIQTGADGFEN--AMNILPTGYAASYKSGKLLIELSAKLM 500
A + +L+KLCNHPDLV G + F + A + A +SGK+
Sbjct: 289 AFVGLITLRKLCNHPDLVTG----GPNKFNDYDATADEEMDFGAPCRSGKM--------Q 336
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
VL +L + K K++L S Q L + E+ Y+Y+R+DG+ ++ R +VE F
Sbjct: 337 VLKALLKLWK-RQGQKVLLFSQSRQMLTILEKFVIQERYEYLRMDGTTAVRSRQLLVEEF 395
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
NK + FIF+L+++ GG G+NL GANR+V+FDPDWNP+ D QA R WR GQ++ +YR
Sbjct: 396 NKNNEIFIFLLTTRVGGLGINLTGANRVVIFDPDWNPSTDIQARERAWRIGQERAVTIYR 455
Query: 621 FLSTGSIEEKMMQRQAHKKALSS-CVVDCEEDVARHFSMSELRSLFQLEENTI 672
L+ G+IEEK+ RQ K LS+ +VD + R F +EL LF L ++ I
Sbjct: 456 LLTGGTIEEKIYHRQIFKVFLSNRILVDPRQ--RRFFKTNELHELFCLGDSKI 506
>gi|391871480|gb|EIT80640.1| transcription regulator XNP/ATRX, DEAD-box superfamily [Aspergillus
oryzae 3.042]
Length = 1006
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 290/567 (51%), Gaps = 68/567 (11%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-- 194
+ +DP + ++PHQ G++FM+ + + E+ GC++A MGLGKT+Q I+L+ T+
Sbjct: 329 IYLDPQIGLRVKPHQLNGIQFMWREL--IEDENKQGCLLAHTMGLGKTMQVISLLATISA 386
Query: 195 --------LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDG-GSKAEI 245
+RQ A +++I+ PSSL++NW E W + P+ + A +
Sbjct: 387 AASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPLRKITTSATM 446
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRS---------HASVLHKNEVG----------- 285
+L +L++SY+ FR+ L+ N+ G
Sbjct: 447 PERLQEVCDWNEE---GGVLIMSYDIFRTWILNRETNKRGKPLNDNDYGKVRDCLLEGPN 503
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
+++ DE H++KN + QA M ++K R+ L+G+P+ N+L++Y+++++++ +G LG
Sbjct: 504 IIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIAEGYLGEFV 563
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
EF+ ++ PI G ++ ER ++ +L+ L I+ + R ++L+ LP K E V
Sbjct: 564 EFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGSLPTKVEFV 623
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
+ + +TDLQK+ Y D+ T+ G+ S + L CNHP DK+
Sbjct: 624 ITVPLTDLQKQAY------DSYVETILQGKGAFGSAQLWSWLAILSLCCNHPSCFRDKLL 677
Query: 466 TGADGFE------NAMNILP----TGYAASYKSGKLL---------------IELSAKLM 500
+ A+ + + M ++P A S KL+ +E+S +
Sbjct: 678 SRANDAQKINKRLDEMEMIPGDEPIAQAGLPDSEKLVSEQEQIFAKVPDIKALEMSHRAR 737
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
++++++ + DKI++ S+ TLD E + + KY RLDG + R + F
Sbjct: 738 IMNSIIDE-SIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDATKRF 796
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N S + ++++S++AGG GLN+ GANR+++FD ++P ++QA+ R +R GQ+KP FVYR
Sbjct: 797 NLGSEKQVYLISTRAGGLGLNIPGANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVFVYR 856
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVD 647
F++ G+ EE M + K L+ VVD
Sbjct: 857 FIAGGTFEEVMYNKAVFKTQLAFRVVD 883
>gi|389583592|dbj|GAB66326.1| helicase [Plasmodium cynomolgi strain B]
Length = 1455
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 170/525 (32%), Positives = 276/525 (52%), Gaps = 51/525 (9%)
Query: 125 LLKIDKDKIQVHVVVDPV-LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
LLK ++ + ++ P ++ ++P+Q EG+ ++Y+ RI I+ADEMGLGK
Sbjct: 333 LLKDANEEDETFIIKQPANINGCMKPYQIEGLNWLYQLYRH-RI----NGILADEMGLGK 387
Query: 184 TLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
TLQ I+L+ L K + K+II+ P S + NW EI KW + A G +
Sbjct: 388 TLQTISLLCYL----RFNKNIKRKSIIICPRSTLDNWYQEIKKWCT-EMKAFKYYGSKEQ 442
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+ N Y +L+ +YE S L + ++ DE HR+KN +S
Sbjct: 443 RRELNKNVLHTDY------DVLLTTYEIVIKDKSALFDIDWFFLVIDEAHRIKNDKSVLS 496
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
++ L+++ R+L++GTP+ N+L E +SL++F+ I ++EF + + D+
Sbjct: 497 SSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISLNDN-- 554
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI- 422
K +E + QL I+ ++RR + + LP K E V + M+ LQK+LY++++
Sbjct: 555 ------KQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYVFVGMSKLQKKLYSDILS 608
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY 482
K+ V M G +N L + + L+K CNHP L DG E
Sbjct: 609 KNIDVINAMTGSKNQMLNI-----LMQLRKCCNHPYLF--------DGIE---------- 645
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
Y G LIE S K+ +LD +L +K + +++L S T+ LD+ + + + Y+Y+
Sbjct: 646 EPPYVEGNHLIETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRVLDIIDDYCRWKNYEYL 704
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
R+DGS +R + FN+ S FIF+LS++AGG G+NL A+ +++FD D+NP D
Sbjct: 705 RIDGSTVGDERQIRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDI 764
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
QAM R R GQKK VYRF++ S+EEK+++R A K L S ++
Sbjct: 765 QAMDRAHRIGQKKKVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 809
>gi|366999540|ref|XP_003684506.1| hypothetical protein TPHA_0B04000 [Tetrapisispora phaffii CBS 4417]
gi|357522802|emb|CCE62072.1| hypothetical protein TPHA_0B04000 [Tetrapisispora phaffii CBS 4417]
Length = 1069
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 277/567 (48%), Gaps = 82/567 (14%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+L +Q+ ++++YE + G I+ DEMGLGKT+Q I + +L L P++
Sbjct: 297 LLFNYQKTCIQWLYELN-----KQNCGGILGDEMGLGKTIQIIAYLASLHHSDRLNGPVL 351
Query: 206 DKAIIVAPSSLVKNWCNEITKW--------LGGRVAALPIDGGSKAEIDNKLNSF----- 252
IV P++++K WCNE W + A + + + D++L F
Sbjct: 352 ----IVCPATVMKQWCNEFHHWWPPLRTVIIHQIGAGMSRNRKEEDMSDSELEQFIMNSN 407
Query: 253 --------MQTYGRRP----------VN---------PILVISYETFRSHASVLHKNEVG 285
M+ + R VN IL+ +Y R H+ L
Sbjct: 408 PDEYSYEDMKDHSSRTKSQIKLKSNIVNLIDKVIKDGHILITTYVGLRVHSDKLLDVNWS 467
Query: 286 LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQ 345
V+ DEGH+++N S+ L+ R++LSGTPIQN+L E +SL F+ G LGT
Sbjct: 468 NVILDEGHKIRNPNSEIALTCKKLRTPNRIILSGTPIQNNLNELWSLFDFIYPGKLGTLP 527
Query: 346 EFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQV 405
F++Q+ PI G + A++ + + L +++ L+RR A ++K LP K E V
Sbjct: 528 VFQQQFVIPINMGGYANATNVQVQAGYKCATALRDMISPYLLRRVKADVAKDLPTKKEMV 587
Query: 406 VCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ 465
+ K+T Q+ Y + S + + KG G I L+K+CNHPDL+
Sbjct: 588 LFCKLTMYQRSKYLEFLNSKELEQIQKGKRQVLFG------IDILRKICNHPDLL----- 636
Query: 466 TGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
E L Y + +SG K+ V+ +L + K K ++ + Q
Sbjct: 637 ------ERDNKRLEKSYGDAKRSG--------KMQVVKQLLLLWK-KQGHKALIFTQTKQ 681
Query: 526 TLDLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
L++ E L K++R+DGS I +R +V+ FN + +F+L+++ GG G+
Sbjct: 682 MLEILEEFISFKDDALNNIKFLRMDGSTNISQRQSLVDQFNNEDFD-LFLLTTRVGGLGI 740
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
NL GANR+++FDPDWNP+ D QA R WR GQK+ +YR + TG+IEEK+ RQ K+
Sbjct: 741 NLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVTGTIEEKIYHRQIFKQF 800
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQL 667
+++ ++ + R F M+EL +LF L
Sbjct: 801 IANKIL-SDPKQKRFFKMNELHNLFTL 826
>gi|196000388|ref|XP_002110062.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens]
gi|190588186|gb|EDV28228.1| hypothetical protein TRIADDRAFT_53632 [Trichoplax adhaerens]
Length = 1207
Score = 250 bits (638), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 172/560 (30%), Positives = 282/560 (50%), Gaps = 76/560 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPL 200
L +Q++GV++M+E + +DA G I+ DEMGLGKT+Q I + L R G
Sbjct: 431 LFKYQQDGVRWMWE----LHRQDA-GGIIGDEMGLGKTIQVIAFLAALKYSKLPQRHGKY 485
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+ +IV P+++++ W E KW R+A G +++ + + + G
Sbjct: 486 TG--LGPVLIVCPATVLEQWVAEFHKWWPPFRIAIFHETGSYAGSLESLVKDIVYSRG-- 541
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
IL+ +Y R + ++L + V + RV+L+G
Sbjct: 542 ----ILITTYSHVRIYQTLLAQKPWEYV----------------------RTPHRVILTG 575
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TP+QN+L + +SL FV G LGT F +Q+ PI G + A++ + A + L
Sbjct: 576 TPMQNNLRDLWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYANATEVQVQTAYKCACVLR 635
Query: 380 GIVNRCLIRRTSALLSK---YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
+N L+RRT A + K +LP K E V+ ++TD Q+ +Y +KSD V + G +
Sbjct: 636 DTINPYLLRRTKAGVQKDCLHLPPKNEHVLFCRLTDFQRCVYQQYLKSDEVAGIIDGRNH 695
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
A + +L+K+CNHP L + A ++ I G+ LS
Sbjct: 696 ------AFGGLITLRKICNHPHLTNISVPRVAKVNVDSEIIRSDGHWL----------LS 739
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
K++ L T+L++ + +++L + Q ++ E+ K Y Y+R+DG+ I R +
Sbjct: 740 GKMIALKTLLSLWR-ENKHRVLLFTQTRQMANILEKFVKSENYPYMRMDGTTNISSRQSL 798
Query: 557 VETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
V+ FN+ + FIF+L+++ GG GLNL GA+R+V+FDPDWNP+ D QA R WR GQ K
Sbjct: 799 VKLFNRNNAIFIFILTTRVGGLGLNLTGADRVVIFDPDWNPSTDMQARERAWRVGQTKEV 858
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDT- 675
+YRFL++G+IEEK+ RQ K+ L++ ++ + R F ++L LF L+ ++T
Sbjct: 859 TIYRFLTSGTIEEKIYHRQVFKEFLTNRILKNPKQ-RRFFKSNDLYELFSLDSTDNNETS 917
Query: 676 ------------HDKIKCSR 683
H+KIK R
Sbjct: 918 AIFAGTGSEIDLHNKIKKYR 937
>gi|62319947|dbj|BAD94038.1| pseudogene [Arabidopsis thaliana]
Length = 1221
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 159/512 (31%), Positives = 273/512 (53%), Gaps = 50/512 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
++ LR +Q EG+ F+ + D I+ADEMGLGKT+Q ++++ L +
Sbjct: 620 LIGGTLRDYQLEGLNFLVNSW----LNDT-NVILADEMGLGKTVQSVSMLGFLQNTQQIP 674
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + +V P S + NW E KWL G + + + E+ + + + RP+
Sbjct: 675 GPFL----VVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPI 730
Query: 262 N-PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
L+ +YE +VL K + ++ DE HRLKN E+Q Y AL+ K ++L++GT
Sbjct: 731 KFNALLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGT 790
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN + E ++L+HF++ G EF + Y+ + S E AN LE
Sbjct: 791 PLQNSVEELWALLHFLDPGKFKNKDEFVENYK--------NLNSFNESELANLHLE---- 838
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGGENTK 438
+ ++RR + K LP K E+++ ++M+ LQK+ Y +++ + + + ++G +
Sbjct: 839 -LRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ--- 894
Query: 439 LGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL--- 495
++ L+ + LKK CNHP L FE+A + GY L ++
Sbjct: 895 --VSLLNIVVELKKCCNHPFL-----------FESADH----GYGGDINDNSKLDKIILS 937
Query: 496 SAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAK 555
S KL++LD +L ++ T ++++ S + LD+ LRG+++ RLDGS + R +
Sbjct: 938 SGKLVILDKLLVRLRETKH-RVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQ 996
Query: 556 VVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
++ FN S++F F+LS++AGG G+NL A+ +V+FD DWNP ND QAM+R R GQ++
Sbjct: 997 AMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQE 1056
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
+YRF+++ S+EE++++R K L V+
Sbjct: 1057 VVNIYRFVTSKSVEEEILERAKRKMVLDHLVI 1088
>gi|297835980|ref|XP_002885872.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
lyrata]
gi|297331712|gb|EFH62131.1| hypothetical protein ARALYDRAFT_480306 [Arabidopsis lyrata subsp.
lyrata]
Length = 1721
Score = 249 bits (637), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 158/507 (31%), Positives = 271/507 (53%), Gaps = 50/507 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
LR +Q EG+ F+ + I+ADEMGLGKT+Q ++++ L + P +
Sbjct: 622 LRDYQLEGLNFLVNSWL-----NDTNVILADEMGLGKTVQSVSMLGFLQNTQQIPGPFL- 675
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN-PIL 265
+V P S + NW E KWL G + + + E+ + + + RP+ L
Sbjct: 676 ---VVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGRPIKFNAL 732
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
+ +YE +VL K + ++ DE HRLKN E+Q Y AL+ K ++L++GTP+QN
Sbjct: 733 LTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQNS 792
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
+ E ++L+HF++ G EF + Y+ + +S E AN LE +
Sbjct: 793 VEELWALLHFLDPGKFKNKDEFVENYK--------NLSSFNESELANLHLE-----LRPH 839
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGGENTKLGMTA 443
++RR + K LP K E+++ ++M+ LQK+ Y +++ + + + ++G + ++
Sbjct: 840 ILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQ-----VSL 894
Query: 444 LSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIEL---SAKLM 500
L+ + LKK CNHP L FE+A + GY L ++ S KL+
Sbjct: 895 LNIVVELKKCCNHPFL-----------FESADH----GYGGDINDNSKLDKIILSSGKLV 939
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L ++ T ++++ S + LD+ LRG+++ RLDGS + R + ++ F
Sbjct: 940 ILDKLLVRLR-ETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDHF 998
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N S++F F+LS++AGG G+NL A+ +V+FD DWNP ND QAM+R R GQ++ +Y
Sbjct: 999 NAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVVNIY 1058
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF+++ S+EE++++R K L V+
Sbjct: 1059 RFVTSKSVEEEILERAKRKMVLDHLVI 1085
>gi|367003313|ref|XP_003686390.1| hypothetical protein TPHA_0G01190 [Tetrapisispora phaffii CBS 4417]
gi|357524691|emb|CCE63956.1| hypothetical protein TPHA_0G01190 [Tetrapisispora phaffii CBS 4417]
Length = 1118
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 162/507 (31%), Positives = 269/507 (53%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
+ S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 201 IKSGTLRDYQIQGLNWLISLY-----ENKLSGILADEMGLGKTLQTISFLGYLRYHKQVD 255
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + ++ P S + NW E KW V A+ + G + D N +Q
Sbjct: 256 GPFL----VIVPKSTLDNWRREFKKWTPD-VNAVILHGDKEKRHDILQNRVLQAKF---- 306
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE +VL K ++ DE HR+KN +S Q + ++ R+L++GTP
Sbjct: 307 -DVLITSYEMIIKEKNVLKKVAWEYIVIDEAHRIKNEQSSLSQIIRLFYSRNRLLITGTP 365
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ + ++ F + +E Q++ D E ++QL +
Sbjct: 366 LQNNLHELWALLNFLLSDVFSDSELFDEWFE------QNNSEEDQEVV-----VQQLHTV 414
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E + + M +Q++ Y +L++ D + G + G
Sbjct: 415 LNPFLLRRIKADVEKSLLPKIEVNLYVGMAQMQRKWYKSLLEKDI--DAVNGAVTKREGK 472
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + L+ S K++
Sbjct: 473 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLVFNSGKMI 515
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E LR Y+Y R+DGS + ++R + ++ +
Sbjct: 516 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYLRDYEYCRIDGSTSHEERIEAIDEY 574
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK S++FIF+L+++AGG G+NL+ A+ +V+FD DWNP D QAM R R GQKK +VY
Sbjct: 575 NKPDSDKFIFLLTTRAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQVYVY 634
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 635 RFVTENAIEEKVIERAAQKLRLDQLVI 661
>gi|412985746|emb|CCO16946.1| SNF2 family helicase/ATPase PasG [Bathycoccus prasinos]
Length = 795
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 183/585 (31%), Positives = 292/585 (49%), Gaps = 63/585 (10%)
Query: 138 VVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQ 197
++DP S +LR +Q GVK++ + + I+AD+MGLGKT+Q I + + LR
Sbjct: 222 LMDP--SAVLRGYQLRGVKWLISLWS-----NGLNGILADQMGLGKTIQTIGFL-SHLRS 273
Query: 198 GPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP--IDGGSKAEIDNKLNSFMQT 255
+ P + +V P S + NW NE K+ A P + GSK E N N+ M
Sbjct: 274 KGICGPFL----VVGPLSTLSNWINEFKKF----CPAFPTVLYHGSKQERANIRNTRMPV 325
Query: 256 YGRRPVN---PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R V+ P++V S+E L K + ++ DEGHRLKN + + + L + A
Sbjct: 326 --RSVVDETFPVIVTSFEIAMFDRKFLQKYQFKYLIVDEGHRLKNFDCKLIRELKIIPAA 383
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
++LL+GTP+QN+L E +SL+HF+ + + +F+ ++ ++ E+ +
Sbjct: 384 NKLLLTGTPLQNNLPELWSLLHFLLPDVFSSLDQFKSWFDFSEELDDKVEFAEREQQRRA 443
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS--DAVRRT 430
+ + +L GI+ L+RR + LP K E +V MT+ QK+ ++ + + +
Sbjct: 444 KVISKLHGILKPFLLRRLKGDVEISLPRKKEIIVYASMTETQKKFNDAMVDKTIEDMLKK 503
Query: 431 MKGGENTKLGMTALSS-ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
GG +G TAL++ + L+K CNHPDL I G DG + + S
Sbjct: 504 EAGGNRVPVGSTALNNMLMQLRKNCNHPDL----ISGGLDG------------SIMFPSA 547
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
+ L+ K+ +LD +L ++ + K ++ S T+ LDL E + RG + R+DGS+
Sbjct: 548 EELVAQCGKMQLLDRLLTSLR-KSGHKTLIFSQMTRMLDLLESFFEQRGERVCRIDGSVK 606
Query: 550 IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWR 609
++R ++ FNK IF+LS++AGG G+NL A+ ++++D DWNP D QAM RV R
Sbjct: 607 QEQRRDAIDAFNKDPTVDIFLLSTRAGGLGINLTAADTVIIYDSDWNPHADMQAMDRVHR 666
Query: 610 DGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD--------CEEDVARHFSMSEL 661
GQ KP VYR + S+E KM+ R A K L V+ ++ S EL
Sbjct: 667 IGQTKPVHVYRLATANSVEGKMLSRAASKLKLEKLVISGANLKQGTTKQKSTESMSTEEL 726
Query: 662 RSLFQLEENT-----------ISDTHDKIKCSRC-VNGIQVKPPP 694
L + +T ISD ++ SR + G Q KP P
Sbjct: 727 VQLLKGGGSTGTDEDMPQSGVISDKDLRVITSRKDLTGEQAKPNP 771
>gi|385303978|gb|EIF48017.1| dna dependent atpase [Dekkera bruxellensis AWRI1499]
Length = 862
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 299/574 (52%), Gaps = 53/574 (9%)
Query: 115 YTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCI 174
+ P +A+D I D+ ++ + P L + +Q+ GV++++E + G I
Sbjct: 128 WEKPHPTAND--GILNDEFRIPGDIYPSLFD----YQKTGVQWLWELYS-----QKTGGI 176
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVA 233
+ DEMGLGKT+Q I + L G L KP++ +V P+++++ WCNE +W RV
Sbjct: 177 IGDEMGLGKTIQVIAFLAGLQYSGKLKKPVL----VVCPATVLRQWCNEFHRWWPAFRVM 232
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLH-KNEVGLVLCDEG 292
L G + + K S ++ + + +++ RS S+++ +N LV
Sbjct: 233 ILHSIGSGMSGMSKKRRSQLRDE-ENXEEDLELEEHQSHRSAHSIMNEQNARELV----- 286
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
HR + +G+ R+ +GTPIQN+L+E +SL F+ G LGT F+KQ+
Sbjct: 287 HRAVSKGHVIITTYVGV----RIYANGTPIQNNLVELWSLFDFIFPGRLGTLPVFQKQFC 342
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PI G + A++ + + L +++ L+RR A +++ LP K+E V+ +T
Sbjct: 343 IPINLGGYANATNVQVQAGYKCAVILKDLISPYLLRRVKADVAQDLPKKSEMVLFCNLTK 402
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
Q+ LY + + S+ + R +KG N AL I L+K+CNHPDLV KI G
Sbjct: 403 RQRVLYQSFLHSEDIERILKGKRN------ALYGIDILRKICNHPDLVEGKIIDGK---- 452
Query: 473 NAMNILPTGYAASYK-SGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
G S K S + L E S K+ V+ +L + + + K ++ + Q L++ E
Sbjct: 453 -----REXGTKDSKKESSRTLAEKSGKMQVVSKLLQLWQ-KENRKALIFTQTRQMLNIME 506
Query: 532 RLSKL------RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGA 585
+ + Y+R+DG+ I +R K+V++FN +F+L+++ GG G+NL GA
Sbjct: 507 HYMDVLNRETNNXFGYLRMDGTTPIGERQKLVDSFNTDPKYQVFLLTTRVGGLGVNLTGA 566
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
+R++++DPDWNP+ QA R WR GQKK +YR + G+IEEK+ RQ K+ L++ V
Sbjct: 567 SRVIIYDPDWNPSTXIQARERAWRLGQKKDVTIYRLMIAGTIEEKIYHRQIFKQFLTNKV 626
Query: 646 VDCEEDVARHFSMSELRSLFQL--EENTISDTHD 677
+ + R F M+++ LF L ++ +DT D
Sbjct: 627 LK-DPKQKRFFKMTDMYDLFTLGDQDTKGTDTAD 659
>gi|410988871|ref|XP_004000700.1| PREDICTED: LOW QUALITY PROTEIN: DNA excision repair protein
ERCC-6-like [Felis catus]
Length = 1241
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 283/567 (49%), Gaps = 65/567 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 TLVNHVLLIMPTNLISTWIKEFVKWTPGMRVKTF--HGPSKNERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K+ +++ + + R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSLNGQEFVWDYVILDEAHKIKSSSTKSAICARAIPTRNRIL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATQGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMTIIKPYFLRRTKEEVQKKKSSNPEVRLREKNLDVDAICEMPSLSRKNDFIIWIRLA 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACLLLNLG 428
Query: 468 ADGF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
+ F EN + L+ S K++ L +L ++ +V S
Sbjct: 429 SVKFSVPGENEGEDSSDVDQIDQITDDTLMAESGKMLFLIELLERLRDEGHQTLVF-SQS 487
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
Q L++ E L K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL L
Sbjct: 488 RQILNIIECLLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLLTTQIGGVGLTL 547
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 548 TAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLI 607
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEE 669
+++ R+F+ ELR LF +E+
Sbjct: 608 RQTT-GDKNPFRYFTKQELRELFTIED 633
>gi|294897357|ref|XP_002775945.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239882312|gb|EER07761.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 1009
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 174/554 (31%), Positives = 271/554 (48%), Gaps = 63/554 (11%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P Q+EGVKF++ R + G ++ADEMGLGKT+Q + +L G L L
Sbjct: 246 LFPFQKEGVKFLWN-----RWREGSGALLADEMGLGKTIQTTAFLISLHVSGILRSTLAR 300
Query: 207 KA-------------IIVAPSSLVKNWCNEITKWLGGRVAALPIDG---GSKAEIDNKLN 250
+I+ P++LV+ W EI W GG L I G GS E +
Sbjct: 301 STHAGVGGDTSCGGVLIICPATLVQQWEQEILSW-GGVDCGLRITGWTSGSTVEEKREAA 359
Query: 251 SFMQTYGRRPVNPILVISYETFRSH-ASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
M + ILV+S+E +R + +L + + + DE +++N +S Q + +
Sbjct: 360 EEMSE-----CSGILVVSFEAYRRYCGDILFEYVWSVCVLDEAQKIRNPDSGITQRVKRM 414
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
R+ LSG+PIQN L E +S+ FV G LG+ F ++ TPI RG AS T
Sbjct: 415 NTPHRIALSGSPIQNSLRELWSICDFVAPGRLGSLPTFEEELATPIERGTRPNASPTATT 474
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYL--PVKTEQVVCIKMTDLQKELYTNLIKS--- 424
A + + ++RR A + L P K+EQV+ + Q E+Y ++ +
Sbjct: 475 AAYRCAVVVRDLTMPLILRRLKADVQDILALPRKSEQVLFCHLAPEQFEVYCEVLSNVRC 534
Query: 425 ---DAVRRTMKGGEN----TKLGMTALSSITSLKKLCNHPDLVM-DKIQTGADGFENAMN 476
+++R N T L +L + L+++CNHPD+++ +Q ADG
Sbjct: 535 TTGSSIQRRYGHSRNERGKTTLPPESLFYLGILRRICNHPDMLLYPGVQ--ADG------ 586
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
GY + +SGKL S L +LD + ++++ S LD+ ER
Sbjct: 587 ----GYGSEQRSGKL----SVLLKILDKWVP-----QGHRVLIFSQTLGMLDILERKVDE 633
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
+G+ R+DGS +K RA +V+ FN + +LS++ GG GLNL GA+R+V+FDPDWN
Sbjct: 634 KGWTCSRMDGSTPVKDRAHIVDDFNSPEGPQLMLLSTRVGGVGLNLTGADRIVIFDPDWN 693
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
P D QA R WR GQK +YR ++ G++EE M ++Q K LS ++ + R F
Sbjct: 694 PMTDAQARERAWRIGQKNEVLIYRLIAMGTVEESMYKKQIFKHYLSQKIL-SDPRQRRKF 752
Query: 657 SMSELRSLFQLEEN 670
+ + F L+ +
Sbjct: 753 LIDSVERQFPLDSD 766
>gi|407042678|gb|EKE41477.1| helicase domain containing protein [Entamoeba nuttalli P19]
Length = 759
Score = 249 bits (636), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 278/545 (51%), Gaps = 46/545 (8%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
+K + +V+ L L HQR GVK+MYE + G I+ DEMGLGKTL +
Sbjct: 91 EKKTFKSGLVMRNELYQSLFEHQRIGVKWMYEL-----FKQHAGGIIGDEMGLGKTLMVL 145
Query: 189 T----LMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKA 243
L T + +++VAP +L+ +W +E +++ RV L D S
Sbjct: 146 AFLEGLQCTFFNKEKTETLTCGNSLVVAPLTLIPHWVSEAHRFVPSLRVIILHNDLSSTN 205
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+ DN +N T+ N + + +YE R+H +L + ++ DEGH++KN ++
Sbjct: 206 K-DN-INLLNTTH-----NSLYLTTYEFIRTHKDILSEYLWFCIVLDEGHKIKNPNAEIS 258
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
+A+ L+A +R+LLSG+PIQN+L E +SL FV G LGT F++Q+ PI G + A
Sbjct: 259 KAVKMLEAHQRLLLSGSPIQNNLSELWSLFDFVYPGKLGTLPLFQQQFIKPIRYGSYTSA 318
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S + A + + L ++ +RR + LP + E+ V +T Q+ +Y +
Sbjct: 319 SYFQFMAALKCAKGLRDMIAPFFLRRIKKEVLPSLPTRQEKFVYCPLTPKQRSMYLEYVN 378
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S ++ + + G M L++I +L+K+CNHP L+ ++ P
Sbjct: 379 SSSIAKVIDGD------MDMLAAIDTLRKICNHPHLI-----------NKTEDLTP---E 418
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
YK S+KL + +L K K ++ Q L++ E++ +KY+R
Sbjct: 419 TIYKE-------SSKLKYVCDLLKQFK-KEGHKALIFCQTRQMLNIIEQMMLNENFKYLR 470
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG ++ KR + + FN +F+L+++ GG G+NL GA+R++M+DPDWNP D QA
Sbjct: 471 MDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLTGADRVIMYDPDWNPTVDSQA 530
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELR 662
R R GQ + +YR + +G+IEE + Q+Q K+ LS ++ EE+ R F +R
Sbjct: 531 KERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKEILSDKILCNEEEKTRKQFKKQFIR 590
Query: 663 SLFQL 667
FQL
Sbjct: 591 EFFQL 595
>gi|340376805|ref|XP_003386922.1| PREDICTED: putative DNA repair and recombination protein RAD26-like
[Amphimedon queenslandica]
Length = 623
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 171/561 (30%), Positives = 290/561 (51%), Gaps = 59/561 (10%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ V ++ LR +QR+G+KF+Y + G ++ D+MGLGKT+Q I + +L
Sbjct: 33 ICVPAPINQYLREYQRDGIKFLYS-----QYSKGVGGLLCDDMGLGKTVQVIAFICAILC 87
Query: 197 Q----------GPLAKPLIDKA--IIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAE 244
+ GP K ++ K+ +++ P S++ NW +EI W + K E
Sbjct: 88 KTCTKIDVFLTGP--KLVVSKSAVLVICPCSVIYNWVSEIETWSHLKTGVY--HRNKKDE 143
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
I +K++ GR V ++ + ET + L+ V DE H LKN +SQ +
Sbjct: 144 ILDKVSR-----GRLDV---VLTTLETAKLKVEELNSIPWLAVFVDEVHALKNPKSQVTE 195
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
AL+ LK + R L+GT +QN L E + ++++++ G LG EF+ YE P+L+GQ +
Sbjct: 196 ALLQLKCQIRFGLTGTALQNRLSELWCILNWIHPGCLGAWHEFQFIYERPLLQGQKFDCT 255
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
E A E+ +QL +++ +IRRT L++ LP K E VV +T LQ +Y+ ++++
Sbjct: 256 RRELATAKEKQQQLSQLLSDWMIRRTKELIADQLPKKEEFVVFCPVTKLQGNIYSTILET 315
Query: 425 DAVRRTMKGGE----NTKL------------GMTALSSI--TSLKKLCNHPDLVMDKIQT 466
D + ++ + N+ L G+ ++ I + L K NH L++
Sbjct: 316 DEMVNFVEAHQPCWCNSGLSKLNCCDKHCSSGLLSVQGIYLSLLLKCSNHIGLLLPSFFA 375
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELS----------AKLMVLDTMLAVIKMTTDDK 516
E A I ++ + ++ I+ S K+ +L +L+ + + K
Sbjct: 376 SDKQNEKAYQICKQVFSHYPEFLEMSIDASFLTLADPTYCGKMQILSKLLSHFHLESS-K 434
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAG 576
+++ S + L++ E R Y Y RLDGSM ++ R VV FN + F+F++S K G
Sbjct: 435 VIIFSESVRLLNILENYMVCRSYTYCRLDGSMRVEDRGAVVSKFNSDPSLFVFLISKKCG 494
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GLN+ GANR+++FDP WNPAND QA R +R GQ++ VYR +S G+IEE + RQ
Sbjct: 495 GVGLNITGANRVIIFDPSWNPANDLQAEDRAFRIGQRQNVEVYRLISEGTIEEILYLRQI 554
Query: 637 HKKALSSCVVDCEEDVARHFS 657
+K+ L++ ++ + R+F+
Sbjct: 555 YKQQLANTAIEGSNE-RRYFT 574
>gi|219120392|ref|XP_002180935.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407651|gb|EEC47587.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 970
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 176/566 (31%), Positives = 288/566 (50%), Gaps = 82/566 (14%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM---WTLLR-QGPLAK 202
L+P+Q E + +M E I+ADEMGLGKTLQ I+++ W LR QGP
Sbjct: 119 LKPYQLEALNWMIHLS-----EKGLNGILADEMGLGKTLQSISVLAYHWEFLRIQGP--- 170
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAE---IDNKLNSFMQTY-GR 258
+I P S + NW NE+ +W + A+ G + IDN ++ T+ GR
Sbjct: 171 -----HLICVPKSTLSNWMNELKRWCPS-LRAIKFHGSREEREYMIDNMFHNEAATHDGR 224
Query: 259 RPVNPIL--------------------VISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
RP I+ V +YE + L K ++ DE HRLKN
Sbjct: 225 RPDRQIMDGSGELIDDNTDTPRPWDVCVTTYEVANAERKTLQKFTWKYLVIDEAHRLKND 284
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
S + + + R+LL+GTP+QN+L E ++L++F+ I +A +F + ++ I
Sbjct: 285 ASMFSKTVRSFRTSNRLLLTGTPLQNNLHELWALLNFLLPDIFSSADQFDEWFDLEI--- 341
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELY 418
D E K N + QL I+ ++RR A ++K LP KTE ++ + M+ +QK+LY
Sbjct: 342 ------DDEEAKKN-MISQLHKILRPFMLRRLKADVAKGLPPKTETILMVGMSKIQKQLY 394
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNIL 478
L+ D ++ G + K L+ + L+K C HP L +G E+ +
Sbjct: 395 KKLLLRDL--DSITGKVSGKNRTAVLNIVMQLRKCCGHPYLF--------EGVEDR-TLD 443
Query: 479 PTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRG 538
P G + L+E KL ++D +L +K + ++++ + T+ LD+ E +RG
Sbjct: 444 PLG--------EHLVENCGKLSMVDKLLKRLK-SRGSRVLIFTQMTRVLDILEDFMVMRG 494
Query: 539 YKYVRLDGSMTIKKRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
Y+Y R+DG+ R ++ FN+ +++F F+LS++AGG G+NL A+ +++D DWNP
Sbjct: 495 YQYCRIDGNTNYDDRESSIDEFNREGTDKFCFLLSTRAGGLGINLQTADTCILYDSDWNP 554
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC-----EEDV 652
D QA R R GQKKP V+R +S ++EEK+++R K L + VV ++ V
Sbjct: 555 QQDLQAQDRCHRLGQKKPVNVFRLVSENTVEEKIVERAQQKLKLDAMVVQQGRLKDQDKV 614
Query: 653 ARHFSMSELR----SLFQLEENTISD 674
+ M+ +R ++F+ EE+TI+D
Sbjct: 615 TKDEIMAAVRFGADTVFRSEESTITD 640
>gi|402077957|gb|EJT73306.1| chromodomain helicase DNA binding protein [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1691
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 162/513 (31%), Positives = 268/513 (52%), Gaps = 31/513 (6%)
Query: 140 DPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP 199
D + + LR Q +G+ F+ + R A I+ADEMGLGKT+Q ++ + L
Sbjct: 450 DYIQNGELREFQLKGLNFL--ALNWTR---ANNVILADEMGLGKTVQTVSFLSWLRNSRD 504
Query: 200 LAKPLIDKAIIVAPSSLVKNWCNEITKWLG--GRVAALPIDGGSKAEIDNKLNSFMQTYG 257
P + +VAP S++ WC+ W V L + +++L +
Sbjct: 505 QEGPFL----VVAPLSVIPAWCDTFNHWSPDLNYVVYLGPEAARSTIREHEL--LIGGNP 558
Query: 258 RRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLL 317
R+P +LV SY+ A L + + DE HRLKN ESQ YQ L+ ++L+
Sbjct: 559 RKPKFNVLVTSYDYILLDADFLRTIKWQALAVDEAHRLKNKESQLYQKLVSFNVPCKMLI 618
Query: 318 SGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
+GTPIQN+L E +L+ F+N G + ++ + ++ +DS + +R + +L Q
Sbjct: 619 TGTPIQNNLAELAALLDFLNPGKVLIDEDLEMLGKEAEVKEEDSAKDEEKRRETQAKLTQ 678
Query: 378 LIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN-LIKSDAVRRTMKGGEN 436
L + ++RRT + LP KTE+++ ++++D+Q + Y N L ++ A GG
Sbjct: 679 LHKAIAPFILRRTKETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASGGHK 738
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
L L+ + LKK+ NHP + F+ A + G S K LI S
Sbjct: 739 QSL----LNVMMELKKVSNHPYM-----------FQGAEERVLAGSTRREDSIKGLITSS 783
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
K+M+LD +LA +K + ++++ S + LD+ ++RGY+Y RLDG++ R
Sbjct: 784 GKMMLLDQLLAKLK-KDNHRVLIFSQMVKMLDILGDYLRVRGYQYQRLDGTIPAGPRRMA 842
Query: 557 VETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
+ FN + S++F F+LS++AGG G+NL+ A+ ++++D DWNP D QAMAR R GQKKP
Sbjct: 843 INHFNAEGSDDFCFLLSTRAGGLGINLMTADTVIIYDSDWNPQADLQAMARAHRIGQKKP 902
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
VYR ++ +IEE++++R +K L +
Sbjct: 903 VNVYRLVAKQTIEEEVVKRARNKLFLEYLTIQA 935
>gi|67466735|ref|XP_649509.1| helicase [Entamoeba histolytica HM-1:IMSS]
gi|56465969|gb|EAL44123.1| helicase domain-containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449706136|gb|EMD46046.1| transcription regulatory protein SNF2, putative [Entamoeba
histolytica KU27]
Length = 759
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 278/545 (51%), Gaps = 46/545 (8%)
Query: 129 DKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCI 188
+K + +V+ L L HQR GVK+MYE + G I+ DEMGLGKTL +
Sbjct: 91 EKKTFKSGLVMRNELYQSLFEHQRIGVKWMYEL-----FKQHAGGIVGDEMGLGKTLMVL 145
Query: 189 T----LMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKA 243
L T + +++VAP +L+ +W +E +++ RV L D S
Sbjct: 146 AFLEGLQCTFFNKEKTETLTCGNSLVVAPLTLIPHWVSEAHRFVPSLRVIILHNDLSSTN 205
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+ DN +N T+ N + + +YE R+H +L + ++ DEGH++KN ++
Sbjct: 206 K-DN-INLLNTTH-----NSLYLTTYEFIRTHKDILSEYLWFCIVLDEGHKIKNPNAEIS 258
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
+A+ L+A +R+LLSG+PIQN+L E +SL FV G LGT F++Q+ PI G + A
Sbjct: 259 KAVKMLEAHQRLLLSGSPIQNNLSELWSLFDFVYPGKLGTLPLFQQQFIKPIRYGSYTSA 318
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIK 423
S + A + + L ++ +RR + LP + E+ V +T Q+ +Y +
Sbjct: 319 SYFQFMAALKCAKGLRDMIAPFFLRRIKKEVLPSLPTRQEKFVYCPLTPKQRSMYLEYVN 378
Query: 424 SDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYA 483
S ++ + + G M L++I +L+K+CNHP L+ ++ P
Sbjct: 379 SSSIAKVIDGD------MDMLAAIDTLRKICNHPHLI-----------NKTEDLTP---E 418
Query: 484 ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVR 543
YK S+KL + +L K K ++ Q L++ E++ +KY+R
Sbjct: 419 TIYKE-------SSKLKYVCDLLKQFK-KEGHKALIFCQTRQMLNIIEQMMLNENFKYLR 470
Query: 544 LDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
+DG ++ KR + + FN +F+L+++ GG G+NL GA+R++M+DPDWNP D QA
Sbjct: 471 MDGLVSSNKRPEYISQFNNDPTVLVFILTTRVGGLGINLTGADRVIMYDPDWNPTVDSQA 530
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELR 662
R R GQ + +YR + +G+IEE + Q+Q K+ LS ++ EE+ R F +R
Sbjct: 531 KERTLRIGQDRDVIIYRLICSGTIEEHIYQKQMAKEILSDKILCNEEEKTRKQFKKQFIR 590
Query: 663 SLFQL 667
FQL
Sbjct: 591 EFFQL 595
>gi|356511188|ref|XP_003524311.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 938
Score = 249 bits (635), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 164/561 (29%), Positives = 293/561 (52%), Gaps = 68/561 (12%)
Query: 143 LSNILRPHQREGVKFMY--ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL 200
++N+L PHQREG+K+++ C+ G I+ D+MGLGKT+Q + G
Sbjct: 257 IANMLYPHQREGLKWLWSLHCL-------GKGGILGDDMGLGKTMQMCGFL-----AGLF 304
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
LI +A+IVAP +L+ +W E++ +G G S + +L +Q G
Sbjct: 305 HSRLIRRALIVAPKTLLPHWIKELSA-VGLSEKTREYFGTSTKLREYELQYILQDKG--- 360
Query: 261 VNPILVISYETFRSHASVLH--------KNEVGL----VLCDEGHRLKNCESQTYQALMG 308
+L+ +Y+ R+++ L NE G+ ++ DEGH +KN +Q ++L+
Sbjct: 361 ---VLLTTYDIVRNNSKSLQGNNYFDDEDNEEGVTWDYMILDEGHLIKNPSTQRAKSLLE 417
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
+ + +++SGTP+QN+L E ++L +F +LG + F++++E PILRG D AS E+
Sbjct: 418 IPSAHCIIISGTPLQNNLKELWALFNFCCPELLGDHEWFKERFENPILRGNDKHASYREK 477
Query: 369 TKANERLEQLIGIVNRCLIRRTSALL--------SKYLPVKTEQVVCIKMTDLQKELYTN 420
+ ++L ++ +RR + + + L K E +V +++T +Q+ LY
Sbjct: 478 RVGSSVAKELRDCIHPYFLRRLKSEIFNQDDEKTTTKLSQKQEIIVWLRLTSVQRHLYEA 537
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA-DGFEN------ 473
+ S V + G + L++IT LKK+C+HP L+ + G +G ++
Sbjct: 538 FLNSKIVLSAIDG--------SPLAAITILKKICDHPHLLTKRAAEGVLEGIDSMLKPEE 589
Query: 474 -------AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
AM+I +K + ++S K+ + ++L + + +++ S +
Sbjct: 590 ANVAEKLAMHIADVAGKDKFKDKQ---DVSCKISFIMSLLDNL-IPEGHCVLIFSQTRKM 645
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGAN 586
L+L E GY ++R+DG+ R K+V F + IF+L+S+ GG GL L A+
Sbjct: 646 LNLIEECLVSEGYDFLRIDGTTKASDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTLTRAD 705
Query: 587 RLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
R+++ DP WNP+ D+Q++ R +R GQKK VYR ++ G++EEK+ ++Q +K L
Sbjct: 706 RVIVVDPSWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLFKIAT 765
Query: 647 DCEEDVARHFSMSELRSLFQL 667
+ +E + R+FS +LR LF L
Sbjct: 766 EHKEQI-RYFSQQDLRGLFSL 785
>gi|209945942|gb|ACI97202.1| okra [Drosophila simulans]
Length = 168
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 143/171 (83%), Gaps = 5/171 (2%)
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDL
Sbjct: 2 GFENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDL 57
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRL 588
FE+L++ R Y +VRLDG+M+IKKR+KVV+ FN +E F+FMLSSKAGGCGLNLIGANRL
Sbjct: 58 FEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESESFLFMLSSKAGGCGLNLIGANRL 117
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK
Sbjct: 118 FMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 168
>gi|209945934|gb|ACI97198.1| okra [Drosophila simulans]
gi|209945936|gb|ACI97199.1| okra [Drosophila simulans]
gi|209945938|gb|ACI97200.1| okra [Drosophila melanogaster]
gi|209945940|gb|ACI97201.1| okra [Drosophila simulans]
gi|209945944|gb|ACI97203.1| okra [Drosophila melanogaster]
gi|209945946|gb|ACI97204.1| okra [Drosophila melanogaster]
gi|209945948|gb|ACI97205.1| okra [Drosophila melanogaster]
gi|209945950|gb|ACI97206.1| okra [Drosophila melanogaster]
gi|209945952|gb|ACI97207.1| okra [Drosophila melanogaster]
gi|209945954|gb|ACI97208.1| okra [Drosophila melanogaster]
gi|209945956|gb|ACI97209.1| okra [Drosophila melanogaster]
gi|209945958|gb|ACI97210.1| okra [Drosophila melanogaster]
gi|209945962|gb|ACI97212.1| okra [Drosophila melanogaster]
gi|209945964|gb|ACI97213.1| okra [Drosophila melanogaster]
gi|209945966|gb|ACI97214.1| okra [Drosophila melanogaster]
gi|209945968|gb|ACI97215.1| okra [Drosophila melanogaster]
gi|209945970|gb|ACI97216.1| okra [Drosophila melanogaster]
gi|209945972|gb|ACI97217.1| okra [Drosophila melanogaster]
gi|209945974|gb|ACI97218.1| okra [Drosophila melanogaster]
gi|209945976|gb|ACI97219.1| okra [Drosophila melanogaster]
gi|209945978|gb|ACI97220.1| okra [Drosophila melanogaster]
gi|209945980|gb|ACI97221.1| okra [Drosophila melanogaster]
gi|209945982|gb|ACI97222.1| okra [Drosophila melanogaster]
gi|209945984|gb|ACI97223.1| okra [Drosophila melanogaster]
gi|209945986|gb|ACI97224.1| okra [Drosophila melanogaster]
gi|209945990|gb|ACI97226.1| okra [Drosophila melanogaster]
gi|209945992|gb|ACI97227.1| okra [Drosophila melanogaster]
gi|209945996|gb|ACI97229.1| okra [Drosophila melanogaster]
gi|209945998|gb|ACI97230.1| okra [Drosophila melanogaster]
gi|209946000|gb|ACI97231.1| okra [Drosophila melanogaster]
gi|209946002|gb|ACI97232.1| okra [Drosophila melanogaster]
Length = 168
Score = 248 bits (634), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 143/171 (83%), Gaps = 5/171 (2%)
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDL
Sbjct: 2 GFENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDL 57
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FE+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 58 FEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRL 117
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK
Sbjct: 118 FMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 168
>gi|349581455|dbj|GAA26613.1| K7_Isw2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1120
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----IQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|198434690|ref|XP_002126745.1| PREDICTED: similar to DNA excision repair protein ERCC-6-like
(ATP-dependent helicase ERCC6-like) (PLK1-interacting
checkpoint helicase) (Tumor antigen BJ-HCC-15) [Ciona
intestinalis]
Length = 1159
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 181/576 (31%), Positives = 296/576 (51%), Gaps = 72/576 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L PHQ EG+K+MY+ R G I+AD+MGLGKT+Q I L+ L AK LI
Sbjct: 102 LYPHQIEGIKWMYDLFQNKR----KGGILADDMGLGKTIQVIALISALFD----AK-LIK 152
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV---- 261
++V P SL+ NW NE W G +V + I Q RR V
Sbjct: 153 HVLLVLPLSLIPNWTNEFANWAPGIKVEEYHGPVAKRKAI------LQQCMHRRSVCITT 206
Query: 262 NPILVISYETFRSHASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
++V +ET L E ++ DEGHR+KN S+T + L + ++ R++L+G
Sbjct: 207 YGLIVTKWETL---GETLDGREFVWDYIILDEGHRIKNA-SKTTKGLHKIPSRNRIILTG 262
Query: 320 TPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
TP+QN + + ++L+ +V QG +LGT + F+ YE PI + A+ + N E L
Sbjct: 263 TPVQNKVRDMWALMDWVTQGSLLGTQKTFKSSYEIPIECARQKGATSGQIRLGNMMSESL 322
Query: 379 IGIVNRCLIRRTSALLSKY----------------------------LPVKTEQVVCIKM 410
+ + ++RRT L++ L K + VV + +
Sbjct: 323 RKLTDPFILRRTKDGLTRNEKENRGNLACVDGAQDPTVLNKQPRFPKLSTKNDFVVWVYL 382
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--IQTGA 468
+D+Q+++Y++ I+ D+V+ + + L +T LKK+C+HP L+ K I+ G
Sbjct: 383 SDIQQQIYSDFIQLDSVKELLLTHR------SPLVHLTVLKKICDHPRLLSTKACIELGL 436
Query: 469 DGFENAMNILPT----GYAA---SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
+ ++ L G AA + S ++L+E S KL L +L ++ + ++ S
Sbjct: 437 ESNDSMTENLDQEAIEGCAANRINNISDQVLMEESGKLQFLIPLLLRLR-EEGHRTLIFS 495
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
+ L++ +R+ +K +R+DG +T + +R K V+ F + S+ +F+L+++ GG GL
Sbjct: 496 MSRKMLNIIQRILMNLKFKVMRMDGLVTKLSEREKRVKLFQEDSSYSVFLLTTQVGGVGL 555
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
L A+R+V++DP WNPA D QA+ R++R GQKK VYR ++ GS+EEK+ +RQ K +
Sbjct: 556 TLTAADRVVIYDPSWNPATDSQAVDRIYRIGQKKSVAVYRLITCGSVEEKIYRRQIFKNS 615
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
+ +D R+FS EL LFQL++ S T
Sbjct: 616 VIQQSTGQCDDPYRYFSKQELAELFQLDDVLSSSTQ 651
>gi|6324879|ref|NP_014948.1| Isw2p [Saccharomyces cerevisiae S288c]
gi|74676479|sp|Q08773.1|ISW2_YEAST RecName: Full=ISWI chromatin-remodeling complex ATPase ISW2;
AltName: Full=Imitation switch protein 2
gi|1420671|emb|CAA99622.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285815176|tpg|DAA11069.1| TPA: Isw2p [Saccharomyces cerevisiae S288c]
gi|392296632|gb|EIW07734.1| Isw2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1120
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----IQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|356527520|ref|XP_003532357.1| PREDICTED: DNA excision repair protein ERCC-6-like [Glycine max]
Length = 1030
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 294/565 (52%), Gaps = 76/565 (13%)
Query: 143 LSNILRPHQREGVKFMY--ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL 200
++ +L PHQREG+K+++ C+ G I+ D+MGLGKT+Q + L
Sbjct: 322 IAKMLYPHQREGLKWLWSLHCL-------GKGGILGDDMGLGKTMQMCGFLAGLFHSR-- 372
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
LI + +IVAP +L+ +W E++ +G G S + +L +Q G
Sbjct: 373 ---LIRRVLIVAPKTLLPHWIKELSA-VGLSEKTREYFGTSTKLREYELQYILQDNG--- 425
Query: 261 VNPILVISYETFRSHASVLH--------KNEVG----LVLCDEGHRLKNCESQTYQALMG 308
+L+ +Y+ R+++ L NE G ++ DEGH +KN +Q ++L+
Sbjct: 426 ---VLLTTYDIVRNNSKSLQGNNYFDDEDNEEGATWDYMILDEGHLIKNPSTQRAKSLLE 482
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
+ + R+++SGTP+QN+L E ++L +F +LG + F++++E PILRG D ASD E+
Sbjct: 483 IPSAHRIIISGTPLQNNLKELWALFNFCCPELLGDHKWFKERFENPILRGNDKHASDREK 542
Query: 369 TKANERLEQLIGIVNRCLIRR------------TSALLSKYLPVKTEQVVCIKMTDLQKE 416
+ ++L ++ +RR T+A LS+ K E +V +++T +Q+
Sbjct: 543 RVGSSVAKELRDRIHPYFLRRLKSEVFNQDDEKTTAKLSQ----KQEIIVWLRLTSVQRH 598
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGADGF- 471
LY +KS+ V G + L+++T LKK+C+HP L+ + + G D
Sbjct: 599 LYEAFLKSEIVLSAFDG--------SPLAALTILKKICDHPLLLTKRAAEDVLEGMDSML 650
Query: 472 ---------ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
+ AM+I +K + ++S K+ + ++L + + +++ S
Sbjct: 651 KPEEANVAEKLAMHIADVAGTDKFKDEQ---DVSCKISFIMSLLDNL-IPEGHCVLIFSQ 706
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
+ L+L + GY ++R+DG+ R K+V F + IF+L+S+ GG GL L
Sbjct: 707 TRKMLNLIQECLVSEGYDFLRIDGTTKATDRLKIVNDFQEGFGAPIFLLTSQVGGLGLTL 766
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A+R+++ DP WNP+ D+Q++ R +R GQKK VYR ++ G++EEK+ ++Q +K L
Sbjct: 767 TRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVLVYRLMTCGTVEEKIYRKQVYKGGLF 826
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+ +E + R+FS +LR LF L
Sbjct: 827 KTATEHKEQI-RYFSQQDLRELFSL 850
>gi|15224228|ref|NP_179466.1| DNA excision repair protein E [Arabidopsis thaliana]
gi|4185142|gb|AAD08945.1| putative SNF2/RAD54 family DNA repair and recombination protein
[Arabidopsis thaliana]
gi|330251711|gb|AEC06805.1| DNA excision repair protein E [Arabidopsis thaliana]
Length = 1187
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 271/558 (48%), Gaps = 76/558 (13%)
Query: 150 HQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDK 207
+QR GV++++E C G I+ DEMGLGKT+Q ++ + + L + KP
Sbjct: 388 YQRVGVQWLWELHCQRA-------GGIIGDEMGLGKTIQVLSFLGS-LHFSKMYKP---- 435
Query: 208 AIIVAPSSLVKNWCNEITKWL------------------GGRVAA----------LPIDG 239
+II+ P +L++ W E KW G+ A + D
Sbjct: 436 SIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASESDYDSESSVDSDH 495
Query: 240 GSKAEIDNKLNSFMQTYGRRPVNP---ILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
K++ K +S + R +N +L+ +YE R L E G + DEGHR++
Sbjct: 496 EPKSKNTKKWDSLLN----RVLNSESGLLITTYEQLRLQGEKLLNIEWGYAVLDEGHRIR 551
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N S L+ R++++G PIQN L E +SL FV G LG F ++ PI
Sbjct: 552 NPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVLPVFEAEFSVPIT 611
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
G + AS + + A L ++ L+RR A ++ +L KTE V+ +T Q+
Sbjct: 612 VGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVNAHLTKKTEHVLFCSLTVEQRS 671
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
Y + S V + G N+ G I ++K+CNHPDL+ E +
Sbjct: 672 TYRAFLASSEVEQIFDGNRNSLYG------IDVMRKICNHPDLL-----------EREHS 714
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
Y +SG K+ V+ +L V K +++L S Q LD+ E
Sbjct: 715 HQNPDYGNPERSG--------KMKVVAEVLKVWKQQG-HRVLLFSQTQQMLDILESFLVA 765
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y Y R+DG +K+R +++ FN + + F+F+L++K GG G NL GANR+++FDPDWN
Sbjct: 766 NEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTKVGGLGTNLTGANRVIIFDPDWN 825
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
P+ND QA R WR GQKK VYR ++ G+IEEK+ RQ +K L++ ++ + R F
Sbjct: 826 PSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQ-RRFF 884
Query: 657 SMSELRSLFQLEENTISD 674
+++ LF L+++ S+
Sbjct: 885 KARDMKDLFILKDDGDSN 902
>gi|365986577|ref|XP_003670120.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
gi|343768890|emb|CCD24877.1| hypothetical protein NDAI_0E00610 [Naumovozyma dairenensis CBS 421]
Length = 1115
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 265/502 (52%), Gaps = 48/502 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L + P +
Sbjct: 178 LRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLKYIKKIDGPFL- 231
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILV 266
I+ P S + NW E KW V A+ + G + + + + + +L+
Sbjct: 232 ---IIVPKSTLDNWRREFNKWTP-EVNAIILHGDKETR-----HKIIYDFILQARFDVLI 282
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
SYE + L K ++ DE HR+KN ESQ Q + L +K R+L++GTP+QN+L
Sbjct: 283 TSYEMVIKEKNALKKVAWQYIVIDEAHRIKNEESQLSQIIRLLYSKHRLLITGTPLQNNL 342
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E ++L++F+ + G + F +E Q++ D E ++QL ++N L
Sbjct: 343 HELWALLNFLLPDVFGDSGIFDDWFE------QNNSEQDQEIV-----VQQLHTVLNPFL 391
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
+RR A + K L K E V + MTD+Q + Y +L++ D + G + G T L +
Sbjct: 392 LRRIKADVEKSLLPKIETNVYVGMTDMQIKWYKSLLEKDI--DAVNGAVGKREGKTRLLN 449
Query: 447 IT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
I L+K CNHP L FE A P Y + + L+ + K++VLD +
Sbjct: 450 IVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLVFNAGKMIVLDKL 492
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
L +K ++++ S ++ LD+ E RG+ Y R+DGS + + R + ++ +NK S
Sbjct: 493 LKRLK-EKGSRVLVFSQMSRLLDILEDYCYFRGFNYCRIDGSTSHEDRIEAIDDYNKPDS 551
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++F+F+L+++AGG G+NL+ A+ +V+FD DWNP D QAM R R GQKK VYRF++
Sbjct: 552 DKFVFLLTTRAGGLGINLVTADTVVLFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTE 611
Query: 625 GSIEEKMMQRQAHKKALSSCVV 646
+IEEK+++R A K L V+
Sbjct: 612 NAIEEKVIERAAQKLRLDQLVI 633
>gi|168019640|ref|XP_001762352.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens
subsp. patens]
gi|162686430|gb|EDQ72819.1| chromatin remodeling complex SWI/SNF protein [Physcomitrella patens
subsp. patens]
Length = 1289
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 271/520 (52%), Gaps = 45/520 (8%)
Query: 133 IQVHVVVDPVL--SNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
I+ V V P + LR +Q EG+++M + I+ADEMGLGKT+Q I L
Sbjct: 530 IEEKVTVQPKMLQGGQLRAYQIEGLQWMLSLYN-----NNLNGILADEMGLGKTIQTIAL 584
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
+ LL K ++ II+AP +++ NW +E++ W G + + DG +AE + +L
Sbjct: 585 LSYLLEN----KGVVGPHIIIAPKAVLPNWAHELSTWAPG-IQTVLYDG--RAE-ERRL- 635
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALM-GL 309
+ YG +LV Y+ + L K + ++ DEGHRLKN + + L G
Sbjct: 636 -LREEYGGEGKFNVLVTHYDLIMRDKAFLKKVKWNYMIVDEGHRLKNHDCMLSRTLTTGY 694
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RR+LL+GTPIQN L E +SL++F+ I +++ F + P D ++ E+
Sbjct: 695 HIRRRLLLTGTPIQNSLQELWSLLNFLLPAIFNSSENFEDWFNAPFTDRSDVSLTEEEQL 754
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
RL Q ++ L+RR A + K+LP KT+ ++ M+ Q+ Y +++S V
Sbjct: 755 LVIRRLHQ---VIRPFLLRRKKAEVEKFLPGKTQVILKCDMSAWQRLYYKQIMESGRVGL 811
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ G++ L TA+ L+K CNHP L ++ G ++
Sbjct: 812 DIGTGKSRGLLNTAMQ----LRKCCNHPYLFLE------------------GRDYEPENR 849
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
LI S K +LD +L + T +++L S T+ +D+ E + G+K++RLDG+
Sbjct: 850 DELIRSSGKFELLDRLLPKL-AKTGHRVLLFSQMTRLMDILEDYLEWHGFKFLRLDGTTK 908
Query: 550 IKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
++R +++ FN S F+F+LS++AGG GLNL A+ +++FD DWNP D QA R
Sbjct: 909 TEERGTLLQKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVILFDSDWNPQMDQQAEDRAH 968
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
R GQKK V+ +S GSIEE++++R K + + V+
Sbjct: 969 RIGQKKEVRVFVLVSVGSIEEEILERAKSKMGIDAKVIQA 1008
>gi|365762966|gb|EHN04498.1| Isw2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1121
Score = 248 bits (633), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----VQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|190407604|gb|EDV10871.1| ATPase component of a two subunit chromatin remodeling complex
[Saccharomyces cerevisiae RM11-1a]
Length = 1121
Score = 248 bits (633), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----VQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|151945386|gb|EDN63629.1| ATPase component of a two subunit chromatin remodeling complex
[Saccharomyces cerevisiae YJM789]
Length = 1120
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----VQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|207340908|gb|EDZ69113.1| YOR304Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1121
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----VQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 260/523 (49%), Gaps = 43/523 (8%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ VK+++E T G I+ DEMGLGKT+Q I + L G L +P ++
Sbjct: 456 YQQTAVKWLWELHT-----QRAGGILGDEMGLGKTVQVIAYLAGLHHSG-LYRP----SL 505
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLN----SFMQTYGRRPVNPI 264
IV P+++++ W E+ W RV L G S + + ++ P +
Sbjct: 506 IVCPATVLRQWMRELRSWWPPFRVVLLHESGRSPPAAATAVRPDRPALLEVALSSPSGLV 565
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
L +Y+ R +L + G+ + DEGH+++N +S+ L R+++SG+PIQN
Sbjct: 566 LT-TYDNLRLQRDLLLRVRWGVAVLDEGHKIRNPDSEITLVCKQLHTVHRLIMSGSPIQN 624
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
L E +SL F+ G LGT F+ Q+ PI G S AS + T A + L +
Sbjct: 625 RLSELWSLFDFIFPGKLGTLPVFQAQFAVPIQVGGYSNASSLQVTTAYKCAVVLRDLTAP 684
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
L+RR A ++ LP K EQV+ + Q ELY + S V ++G AL
Sbjct: 685 YLLRRRKADVAAQLPAKMEQVLFCTLVSEQLELYRAYLASTEVGEILEGSRR------AL 738
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
I L+K+CNHPDL+ A+ + N S KL V +
Sbjct: 739 CGIDILRKICNHPDLLERVTAQDAEDYGNPAR-------------------SGKLRVAER 779
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
+L T K +L Q LD+ E+L RG+ Y R+DG + R ++++ FN
Sbjct: 780 VLTSWH-TARQKALLFCQTQQMLDILEKLVAGRGWSYHRMDGGTPVAVRPRLIDDFNTNP 838
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+ F+F+L++K GG G+NL GA R++++DPDWNP+ D QA R WR GQ +YR ++
Sbjct: 839 DVFVFLLTTKVGGLGVNLTGATRVMLYDPDWNPSTDIQARERAWRIGQSHSVTIYRLITA 898
Query: 625 GSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
G+IEEK+ RQ +K L++ V+ + R F+ ++ LF L
Sbjct: 899 GTIEEKIYHRQIYKSFLTNKVLR-DPRQKRFFTARDISELFVL 940
>gi|259149779|emb|CAY86583.1| Isw2p [Saccharomyces cerevisiae EC1118]
Length = 1121
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----VQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|209945932|gb|ACI97197.1| okra [Drosophila yakuba]
Length = 168
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 143/171 (83%), Gaps = 5/171 (2%)
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFEN+ N+LP+ +Y + L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDL
Sbjct: 2 GFENSQNVLPS----NYNTKDLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDL 57
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FE+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 58 FEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRL 117
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK
Sbjct: 118 FMFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKK 168
>gi|209945988|gb|ACI97225.1| okra [Drosophila melanogaster]
Length = 168
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/171 (67%), Positives = 142/171 (83%), Gaps = 5/171 (2%)
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFEN+ N+LP+ +YK ELS K M+LD MLA I+ +DK+VL+SNYTQTLDL
Sbjct: 2 GFENSQNVLPS----NYKPKDXXPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDL 57
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FE+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 58 FEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRL 117
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK
Sbjct: 118 FMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 168
>gi|256272525|gb|EEU07504.1| Isw2p [Saccharomyces cerevisiae JAY291]
Length = 1121
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----VQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>gi|209945994|gb|ACI97228.1| okra [Drosophila melanogaster]
Length = 167
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 142/171 (83%), Gaps = 6/171 (3%)
Query: 470 GFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
GFEN+ N+LP +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDL
Sbjct: 2 GFENSQNVLP-----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDL 56
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRL 588
FE+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 57 FEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRL 116
Query: 589 VMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKK 639
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK
Sbjct: 117 FMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKK 167
>gi|307199888|gb|EFN80285.1| DNA repair and recombination protein RAD54B [Harpegnathos saltator]
Length = 509
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/276 (44%), Positives = 178/276 (64%), Gaps = 17/276 (6%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
+LR HQR G+ F+YEC+ G+++ + +G I+ADEMGLGKTLQCITL+WT+L++GP +KP++
Sbjct: 1 MLREHQRHGIVFLYECLMGLKVANYFGGILADEMGLGKTLQCITLIWTMLKKGPYSKPIL 60
Query: 206 DKAIIVAPSSLVKNWCNEITKWLG-GRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
+A+I+APSSL NW E KWLG RV+ +DG +K + + RP N +
Sbjct: 61 KRALILAPSSLCDNWKKEFAKWLGCHRVSPFVVDGKNKP----------KDFTSRPRNSV 110
Query: 265 LVISYETF-RSHASVLHKNEVG--LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
++ISYE F R H + NE+ L++CDEGHRLKN + + L + K+R++L+GTP
Sbjct: 111 MIISYEMFIRCHMEI---NEIAFDLIVCDEGHRLKNSNIKAAKLLYEVNCKKRIILTGTP 167
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
IQNDL E+++LV FVN ILGT E+R YE PI+ Q ASD + NER +L
Sbjct: 168 IQNDLKEFYALVDFVNPSILGTPSEYRNYYEDPIVASQSPHASDDVLSLGNERAMELHEC 227
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
R ++RRT ++KYLP K E + + + ++L
Sbjct: 228 TKRFILRRTQETINKYLPCKHEMTLMRNLKNTNEKL 263
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFML 571
T++K+VLVS YTQTLDL + + + KY+RLDG+ + R+KV+E FN KT I +L
Sbjct: 259 TNEKLVLVSYYTQTLDLLQTVCSVERLKYLRLDGATSTTTRSKVIEQFNTKTDESKILLL 318
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+KAGG GLNL GA+RLV+FD DWNPA+D QAMAR+WRDGQKK ++YR L+TG+IEEK+
Sbjct: 319 SAKAGGVGLNLPGASRLVLFDSDWNPASDMQAMARIWRDGQKKDVYIYRLLTTGTIEEKI 378
Query: 632 MQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
QRQ K LS VVD + S EL+ LF L +T+S THD + CS
Sbjct: 379 YQRQISKAGLSEFVVDLNHLRSLKLSTEELKDLFTLTTDTVSVTHDLMNCS 429
>gi|317149017|ref|XP_001823066.2| SNF2 family helicase/ATPase [Aspergillus oryzae RIB40]
Length = 1364
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 160/570 (28%), Positives = 291/570 (51%), Gaps = 74/570 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-- 194
+ +DP + ++PHQ G++FM+ + + E+ GC++A MGLGKT+Q I+L+ T+
Sbjct: 547 IYLDPQIGLRVKPHQLNGIQFMWREL--IEDENKQGCLLAHTMGLGKTMQVISLLATISA 604
Query: 195 --------LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI----DGGSK 242
+RQ A +++I+ PSSL++NW E W + P+ +
Sbjct: 605 AASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPLRKITTSATM 664
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRS---------HASVLHKNEVG-------- 285
E ++ + + G +L++SY+ FR+ L+ N+ G
Sbjct: 665 PERLQEVCDWNEEGG------VLIMSYDIFRTWILNRETNKRGKPLNDNDYGKVRDCLLE 718
Query: 286 ---LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
+++ DE H++KN + QA M ++K R+ L+G+P+ N+L++Y+++++++ +G LG
Sbjct: 719 GPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIAEGYLG 778
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
EF+ ++ PI G ++ ER ++ +L+ L I+ + R ++L+ LP K
Sbjct: 779 EFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGSLPTKV 838
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
E V+ + +TDLQK+ Y D+ T+ G+ S + L CNHP D
Sbjct: 839 EFVITVPLTDLQKQAY------DSYVETILQGKGAFGSAQLWSWLAILSLCCNHPSCFRD 892
Query: 463 KIQTGADGFE------NAMNILP----TGYAASYKSGKLL---------------IELSA 497
K+ + A+ + + M ++P A S KL+ +E+S
Sbjct: 893 KLLSRANDAQKINKRLDEMEMIPGDEPIAQAGLPDSEKLVSEQEQIFAKVPDIKALEMSH 952
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
+ ++++++ + DKI++ S+ TLD E + + KY RLDG + R
Sbjct: 953 RARIMNSIIDE-SIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDAT 1011
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+ FN S + ++++S++AGG GLN+ ANR+++FD ++P ++QA+ R +R GQ+KP F
Sbjct: 1012 KRFNLGSEKQVYLISTRAGGLGLNIPVANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVF 1071
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
VYRF++ G+ EE M + K L+ VVD
Sbjct: 1072 VYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 1101
>gi|301114327|ref|XP_002998933.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
gi|262111027|gb|EEY69079.1| DNA excision repair protein ERCC-6 [Phytophthora infestans T30-4]
Length = 1052
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 180/590 (30%), Positives = 288/590 (48%), Gaps = 95/590 (16%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
VL+ +L PHQRE ++++++ E G I+ D+MGLGKT+Q + + +L A
Sbjct: 222 VLTQLL-PHQRECLEWLHKL-----HERGVGGILGDDMGLGKTVQLASFLGSLH-----A 270
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDG-----GSKAEIDNKLNSFMQT 255
+ +++ P+S++ W E+ KW RV L G S +E +L +
Sbjct: 271 ARRLRTVLLLCPASVLLQWVRELHKWAPWMRVVLLHASGTGVSASSSSECYEQLIEDVFR 330
Query: 256 Y-----------GRRPVNP----ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCES 300
+ G R +P +++ +YE R + S+ E V+ DEGHR++N ++
Sbjct: 331 FDDDEEEDVGDPGLRQDSPTGGGVVISTYENVRQYQSLFLTREWDYVVLDEGHRIRNPDA 390
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
+T L+ R++LSGTPIQN L E +SL FV G LGT F ++ PI G
Sbjct: 391 ETTLVCKQLRTVHRIILSGTPIQNRLRELWSLFDFVYPGRLGTLPTFDDEFVLPIRAGGY 450
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALL------SKYLPVKTEQVVCIKMTDLQ 414
+ A+ + A + L ++ L+RRT + S LP K EQ++ ++T Q
Sbjct: 451 ATATKMQVLMAYKCALALKDLIQPFLLRRTKQEVMATDANSSMLPGKQEQILFCRLTQRQ 510
Query: 415 KELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG---- 470
+ LY + S V ++ + +I+ L+ +CNHPDL + T DG
Sbjct: 511 RALYKRFLASPEVASVLR------RDLRPFRAISVLRHICNHPDL----LATFGDGGLAD 560
Query: 471 -------------------FENAMNIL-----------PTGYAASYKSGKLLIELSAKLM 500
F N +L P G A++ S K++
Sbjct: 561 KKRQSYFKEEEEEEEGEEGFTNVAGLLDEDKEEGESDEPFGAASA----------SGKMI 610
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
VL +L + K ++++ + LD+ E G+ RLDG+ + +R + ++ F
Sbjct: 611 VLQKVLTLWK-EQKHRVLVFTQTRSMLDILESFMSRLGHACTRLDGTTGVAERQQRLDAF 669
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N SN F F+L+++AGG G+NL+GA+R+V+FDPDWNP+ D QA R WR GQ+KP VY
Sbjct: 670 NAPDSNLFAFLLTTRAGGIGVNLVGADRVVVFDPDWNPSTDVQARERAWRIGQQKPVTVY 729
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
R ++ G+IEEK+ RQ K+ L+S V+ + R F+ LR LF L +
Sbjct: 730 RLVTAGTIEEKIYHRQIFKQYLTSKVLH-DAKRKRCFNKHSLRDLFVLAD 778
>gi|339247147|ref|XP_003375207.1| DNA excision repair protein ERCC-6 [Trichinella spiralis]
gi|316971517|gb|EFV55276.1| DNA excision repair protein ERCC-6 [Trichinella spiralis]
Length = 1202
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/524 (29%), Positives = 263/524 (50%), Gaps = 61/524 (11%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM--------------- 191
L +Q+ GV ++ +C + A G I+ DEMGLGKT+Q I +
Sbjct: 88 LHKYQKVGVHWLLDCYS-----KATGAILGDEMGLGKTVQLIAFLISLFVSNKYVQGFQY 142
Query: 192 --WTLLRQGPLAKPL----IDKAIIVAPSSLVKNWCNEITKWL-GGRVAALPIDGGSKAE 244
WT+ + L + +I P++L+ +W E+ W RVA L G +
Sbjct: 143 ELWTVEFEFNLHSNFSIYGLGPVLIACPATLLFHWVQELHHWWPRFRVAVLHESGSFEGP 202
Query: 245 IDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
+N + S ++ G IL+ SY + L + + + DEGH ++N +++ +
Sbjct: 203 RENLIRSINKSRG------ILITSYGMMLRFENALLQQHWHIAVLDEGHLIRNPDAKLTK 256
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
+ L+ R++++G+P+QN L E +SL FV G+LG+ F ++ PI +G + A+
Sbjct: 257 IVKQLRTPYRIIITGSPMQNSLRELWSLFDFVYPGLLGSLSVFLRELGVPITQGGYATAT 316
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSK--YLPVKTEQVVCIKMTDLQKELYTNLI 422
+ A + L + L+RR + + LP K E ++ ++T QK LY
Sbjct: 317 ALQVRTAYKCAFILRNAIAPYLLRRMKSEVQAEVNLPSKKEHILFCQLTGPQKSLYKQYA 376
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY 482
S+ + + G + LG+ L +KLCNHPDLV + ++ F GY
Sbjct: 377 NSEECKAILSGKLDIFLGLAYL------RKLCNHPDLVSRAVGENSNEF---------GY 421
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
S K++VL ++L + K + +I+L S Q L++ E K R Y ++
Sbjct: 422 ----------FRRSGKMIVLHSLLKLWKQE-NHRILLFSQSRQMLNILEDFLKKRNYAHL 470
Query: 543 RLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQ 602
R+DG+ + R +V TFN+ ++ F+ +L+++ GG GL+L GA+R++++DPDWNP D Q
Sbjct: 471 RMDGTTAVGSRQSIVTTFNENADIFVLLLTTRVGGLGLDLTGADRVILYDPDWNPTTDAQ 530
Query: 603 AMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
A R WR GQ VYR +S+G++EEK+ RQ K+ L + V+
Sbjct: 531 AQERAWRLGQTSDVVVYRLVSSGTVEEKIYHRQIFKQFLMNRVL 574
>gi|395548628|ref|XP_003775239.1| PREDICTED: DNA excision repair protein ERCC-6-like [Sarcophilus
harrisii]
Length = 1438
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 173/575 (30%), Positives = 294/575 (51%), Gaps = 86/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L +Q+EGV F+Y E+ G I+AD+MGLGKT+Q I + +
Sbjct: 129 LHDQLFEYQKEGVAFLYSLYK----ENRKGGILADDMGLGKTIQIIAFLSAMFD-----A 179
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L+ +++ P+SL+ W E KW G RVA G SK+E LN + G
Sbjct: 180 ELVKYVLLIMPTSLISTWIKEFGKWTPGMRVATF--HGSSKSERTRNLNRIQRKNG---- 233
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+ V +Y+ ++ S L NE ++ DE H++K+ +++ A + K R+L
Sbjct: 234 --VAVTTYQMVINNWQQLSQLDGNEFVWDYLILDEAHKIKSSSTKSSIAARAIPVKNRLL 291
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTP+QN+L E +SL F QG +LGT++ F+ +YE PI R ++ A+ E+ +
Sbjct: 292 LTGTPVQNNLYELWSLFDFACQGSLLGTSKTFKMEYENPITRAREKDATSGEKALGLKIS 351
Query: 376 EQLIGIVNRCLIRRT-------------SALLSK-----------YLPVKTEQVVCIKMT 411
E L+ ++ +RRT S+L K L K E ++ + +
Sbjct: 352 ENLMTLIKPYFLRRTKDDVQKKNNTKAQSSLPEKKLGDDVVCEIPSLSRKNELIIWVYLV 411
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
LQ+E+Y + + +++ + + L+ +T LKKLC+HP L+ +
Sbjct: 412 PLQEEIYRKFVSLNHIKQLLMETR------SPLAELTILKKLCDHPRLLSAR-------- 457
Query: 472 ENAMNILPTGYAASYKSGK----------------LLIELSAKLMVLDTMLAVIKMTTDD 515
A ++L + GK L++ S K++ L +A++K D+
Sbjct: 458 --ACSLLGLKEGIFFNKGKNQEGQSEIQIDQVPPESLMKESGKVIFL---MALLKRLQDE 512
Query: 516 --KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLS 572
+ ++ S + LD+ E L K +K +R+DG++T + +R + ++ F ++ + +F+L+
Sbjct: 513 GHQTLVFSQSRRLLDIIEHLLKKENFKTLRIDGTVTQLPERQRRIDLFQQSQDASVFLLT 572
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
S+ GG GL L A+R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+
Sbjct: 573 SQVGGVGLTLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIY 632
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
+RQ K +L +++ R+FS ELR LF +
Sbjct: 633 RRQVFKDSLIRQTTGDQKNPVRYFSKQELRELFTI 667
>gi|357520033|ref|XP_003630305.1| DNA excision repair protein ERCC-6-like protein [Medicago
truncatula]
gi|355524327|gb|AET04781.1| DNA excision repair protein ERCC-6-like protein [Medicago
truncatula]
Length = 1129
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 166/565 (29%), Positives = 296/565 (52%), Gaps = 72/565 (12%)
Query: 141 PVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL 200
P ++ +L PHQREG+K+++ VR G I+ D+MGLGKT+Q + L
Sbjct: 379 PKIAKMLYPHQREGLKWLWSL--HVR---GKGGILGDDMGLGKTMQICGFLAGLFHSR-- 431
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
LI + ++VAP +L+ +W E++ +G G + +L +Q G
Sbjct: 432 ---LIRRVLVVAPKTLLPHWIKELS-VVGLSEKTKEYFGACAKLREYELQYILQDKG--- 484
Query: 261 VNPILVISYETFRSHASVL--HK------NEVG----LVLCDEGHRLKNCESQTYQALMG 308
+L+ +Y+ R++ L H+ NE G ++ DEGH +KN +Q ++L+
Sbjct: 485 ---VLLTTYDIVRNNTKSLKGHRYFDDEDNEDGPTWDYMILDEGHLIKNPSTQRAKSLLE 541
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
+ + R+++SGTP+QN+L E ++L +F +LG + F+ +YETPIL+G D AS E+
Sbjct: 542 IPSAHRIIISGTPLQNNLKELWALFNFCCPDLLGDKKWFKDKYETPILKGNDKNASAREK 601
Query: 369 TKANERLEQLIGIVNRCLIRR------------TSALLSKYLPVKTEQVVCIKMTDLQKE 416
+ ++L + +RR T+A LS+ K E +V +++T++Q+
Sbjct: 602 CIGSSVAKELRDHIQPYFLRRLKSEVFNQDTEKTTAKLSQ----KREIIVWLRLTNVQRH 657
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA-DGFEN-- 473
LY +KS+ V G + L+++T LKK+C+HP L+ + DG E+
Sbjct: 658 LYEAFLKSEIVLSAFDG--------SPLAALTILKKICDHPLLLTKRAAEDVLDGLESML 709
Query: 474 -----------AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
AM+I ++ ++S K++ + ++L + + ++++ S
Sbjct: 710 KPEEVNVAEKLAMHIADVAETDKFEDKH---DVSCKIVFIMSLLDNL-IPEGHRVLIFSQ 765
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
+ L+L + +GY ++R+DG+ R K+V+ F IF+L+S+ GG GL L
Sbjct: 766 TRKMLNLIQECITSQGYDFLRIDGTTKSCDRIKIVDDFQDGVGAPIFLLTSQVGGLGLTL 825
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A+R+++ DP WNP+ D+Q++ R +R GQKK VYR +++G++EEK+ ++Q +K L
Sbjct: 826 TRADRVIVVDPAWNPSTDNQSVDRAYRIGQKKDVIVYRLMTSGTVEEKIYRKQVYKGGLF 885
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
V + +E R+FS +L+ L L
Sbjct: 886 KTVSEQKEQT-RYFSQKDLKELLSL 909
>gi|401623518|gb|EJS41615.1| isw2p [Saccharomyces arboricola H-6]
Length = 1115
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 264/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 175 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 229
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N +Q
Sbjct: 230 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILQARF---- 280
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 281 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 339
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G + F + +E Q++ D E ++QL +
Sbjct: 340 LQNNLHELWALLNFLLPDIFGDSAIFDEWFE------QNNSEQDQEIV-----VQQLHSV 388
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR + + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 389 LNPFLLRRVKSDVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 446
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI + K++
Sbjct: 447 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNAGKMI 489
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R Y+Y R+DGS + ++R + ++ +
Sbjct: 490 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFREYEYCRIDGSTSHEERIEAIDDY 548
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK +E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 549 NKPDSEKFVFLLTTRAGGLGINLVAADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 608
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 609 RFVTENAIEEKVIERAAQKLRLDQLVI 635
>gi|449016916|dbj|BAM80318.1| SWI/SNF related, matrix associated, actin dependent regulator of
chromatin, subfamily a [Cyanidioschyzon merolae strain
10D]
Length = 849
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 158/507 (31%), Positives = 262/507 (51%), Gaps = 40/507 (7%)
Query: 146 ILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR---QGPLAK 202
+LR +Q G++++ E+ I+ADEMGLGKT+QCI L+ L QGP
Sbjct: 180 VLRDYQLAGLEWLVSLY-----ENGINGILADEMGLGKTIQCIALICHLREMGVQGPF-- 232
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+IV P +++ NW +E ++ A L G+K+E + T
Sbjct: 233 ------LIVGPLTVLPNWISEFQRFAPSVYALLY--HGTKSERQLLRKRHLSTRNGASNM 284
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
P+++ SYE L K ++ DEGHR+KN + Q + L + R+L++GTP+
Sbjct: 285 PVVITSYEIVMRDRVYLSKYHWAYIIIDEGHRIKNMDCQLLRELQSYTSANRLLITGTPL 344
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL+HF+ I + + FR+ ++ G D A ER + + + +L I+
Sbjct: 345 QNNLDELWSLLHFLMPDIFDSVELFREWFDF----GNDIAAGALERQQEDAIVSKLHMIL 400
Query: 383 NRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG--GENTKLG 440
++RR + + K +P K E + ++ LQ+E Y +++ D + + G
Sbjct: 401 RPFMLRRLKSDVEKKMPKKREIYLFAPLSALQREYYMAIMQ-DRIHELLNARYGREYTRP 459
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
+T + L+K+C HP L+ + + DG A + + L+ + KL
Sbjct: 460 LTLRNKFMQLRKVCCHPYLIAEPEENFTDG-------------AYPITDERLVHAAGKLA 506
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+ D +L ++ K++L S +T L++ E +LRG+KY R+DGS+ + R + +E F
Sbjct: 507 LADRLLPRLR-ARGHKVLLYSQFTSMLNILEDYLQLRGHKYARIDGSVKFEDRIRQMEAF 565
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N +E FIF++S++AGG GLNL A+ ++ +D D NP D QAM R R GQ+KP VY
Sbjct: 566 NSPDSEIFIFLMSTRAGGLGLNLQAADTVIFYDSDPNPQMDLQAMDRCHRIGQRKPVHVY 625
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
R ++ S+EE+M+ R K+ L VV
Sbjct: 626 RLVTPNSVEERMLNRAVEKRKLERLVV 652
>gi|83286649|ref|XP_730253.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23489925|gb|EAA21818.1| SNF2 family N-terminal domain, putative [Plasmodium yoelii yoelii]
Length = 1350
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 271/527 (51%), Gaps = 55/527 (10%)
Query: 125 LLKIDKDKIQVHVVVDPV-LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
LLK D ++ P +S ++P+Q EG+ ++Y+ I+ADEMGLGK
Sbjct: 221 LLKEADDDDDTFIIKQPQNISGTMKPYQIEGLNWLYQLYRH-----KINGILADEMGLGK 275
Query: 184 TLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
TLQ I+L+ L K + K II+ P S + NW EI KW P
Sbjct: 276 TLQTISLLCYL----RFNKNIKRKNIIICPRSTLDNWYEEIKKWCS---EMKPFKYYGSK 328
Query: 244 EIDNKLNS--FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
E +LN Y +L+ +YE S L+ + ++ DE HR+KN +S
Sbjct: 329 EQRKELNKTVLHSDY------DVLLTTYEIVIKDKSALYDIDWFFLVIDEAHRIKNDKSV 382
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
++ LK++ R+L++GTP+ N+L E +SL++F+ I ++EF + + D+
Sbjct: 383 LSSSVRFLKSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISTNDN 442
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
K +E + QL I+ ++RR + + LP K E + + M+ LQK+LY+++
Sbjct: 443 --------KQSEIITQLHTILKPFMLRRLKVEVEQSLPPKREIYIFVGMSKLQKKLYSDI 494
Query: 422 I-KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
+ K+ V M G +N L + + L+K CNHP L DG E
Sbjct: 495 LSKNIDVINAMTGSKNQMLNI-----LMQLRKCCNHPYLF--------DGIE-------- 533
Query: 481 GYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYK 540
Y G LIE S K+ +LD +L +K + +++L S T+ LD+ + + + Y+
Sbjct: 534 --EPPYIEGNHLIETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRLLDIIDDYCRWKKYE 590
Query: 541 YVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPAN 599
Y+R+DGS +R + FN+ S FIF+LS++AGG G+NL A+ +++FD D+NP
Sbjct: 591 YLRIDGSTVGDERQIRINKFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQM 650
Query: 600 DDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
D QAM R R GQKK VYRF++ S+EEK+++R A K L S ++
Sbjct: 651 DIQAMDRAHRIGQKKRVIVYRFVTQNSVEEKIVERAAKKLKLDSLII 697
>gi|449278270|gb|EMC86176.1| Putative DNA repair and recombination protein RAD26-like protein,
partial [Columba livia]
Length = 684
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 173/564 (30%), Positives = 283/564 (50%), Gaps = 68/564 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
++ LR +QREG +F+Y R GCI+ D+MGLGKT+Q I+ + +L + +
Sbjct: 103 INRYLRDYQREGAQFLYRHYANKR-----GCILGDDMGLGKTIQVISFLAAVLHKKGTRE 157
Query: 203 PLIDKA--------------------IIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSK 242
+ + +IVAP S++ NW +E+ W +V L GSK
Sbjct: 158 DIENNMPEFLLRTMKKESKCNPKKTFLIVAPLSVLYNWKDELDTWGYFKVCVLH---GSK 214
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQT 302
D+ LN Q G+ V + +YE R + + E V+ DE HR+KN ++Q
Sbjct: 215 K--DDDLNRIKQ--GKCEV---ALTTYEILRLYLDEFNSVEWSAVIVDEAHRIKNPKAQI 267
Query: 303 YQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSC 362
Q + LK R+ L+GT +QN++ E + ++ + G+LG+ F+K++ P+ GQ
Sbjct: 268 TQTMKSLKCSVRIGLTGTILQNNMKELWCVMDWAVPGLLGSRIHFKKKFSDPVEHGQRHT 327
Query: 363 ASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI 422
A+ E + + +L ++ +RRT AL+S LP K +++V +T+ QK +Y ++
Sbjct: 328 ATKRELATGRKAMVKLARKMSGWFLRRTKALISDQLPKKEDRMVYCSLTEFQKAVYQAVL 387
Query: 423 KSDAVRRTMKGGE-----------NTKLGMTA---------LSSITSLKKLCNHPDLVM- 461
+++ V ++ GE N + A S +T L+K+ NH L+
Sbjct: 388 ETEDVSLVLRAGEPCSCNSGRRRKNCCYKVNAHGETIKSLRFSYLTILRKVANHAALLQT 447
Query: 462 ---DKIQTG------ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMT 512
K Q A F + + + A++++ + S K+ VL +L +
Sbjct: 448 DNTSKQQEAHIKRVCAQVFSSFPDFVQLSKDAAFETIS-DPKYSGKMKVLQQLLNHFRRN 506
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLS 572
DK++L S T+ LD+ E+ G Y RLDG+ + R ++V FN T I ++S
Sbjct: 507 R-DKVLLFSFSTKLLDVLEQYCMASGLDYRRLDGNTKSEDRTRIVREFNSTQEINICLVS 565
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
+ AGG GLN +GAN +++FDP WNPAND QA+ R +R GQ K V+R +S G++EE M
Sbjct: 566 TMAGGLGLNFVGANVVILFDPTWNPANDLQAIDRAYRIGQYKAVKVFRLISLGTVEEMMY 625
Query: 633 QRQAHKKALSSCVVDCEEDVARHF 656
RQ +K+ L C V E+ R+F
Sbjct: 626 LRQVYKQQL-HCAVVGSENAKRYF 648
>gi|291235335|ref|XP_002737602.1| PREDICTED: DNA excision repair protein ERCC-6-like [Saccoglossus
kowalevskii]
Length = 2298
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 301/583 (51%), Gaps = 78/583 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P+QRE + + + G+ + + G I+ D+MGLGKT+Q I + G +
Sbjct: 99 LYPYQRESILWFW----GLHKKKS-GGILGDDMGLGKTIQVIAFL-----SGLFDAERVK 148
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN-------SFMQTYGRR 259
+IV P++L+ NW E KW G + L G +K E + L+ + + TYG
Sbjct: 149 SILIVLPATLIINWEREFDKWAPG-IRVLTYHGSNKRERERALSKVQRRGGALLSTYG-- 205
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
I+ +++ ++ V+ DEGH++KN +++ +A+ + AKRR++L+G
Sbjct: 206 ----IISNNWQEVATNDRDGRDFVWDYVILDEGHKIKNKSNKSSKAVHAIPAKRRIILTG 261
Query: 320 TPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQL 378
TPIQN+L E ++L FV QG +LGT + F +YE PI+R + A +E E E L
Sbjct: 262 TPIQNNLKELWALFDFVTQGQLLGTLKTFCLEYEGPIVRARQKDARPSEMRLGTEMAENL 321
Query: 379 IGIVNRCLIRRTSA-LLSKYLPVKTEQ----------------------------VVCIK 409
I+ RRT A L K +T+ ++ +
Sbjct: 322 RQIIEPYFKRRTKAETLEKNKENQTKDDTREEMDGNTTASSTSTPTPSLTRKNDLILWVF 381
Query: 410 MTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTG-- 467
++ +Q+++Y + +++ VR+ + + L+ +T LKK+C+HP L ++K G
Sbjct: 382 LSKVQQKIYQDFVETPEVRQLL------MTTRSPLAMLTMLKKICDHPRL-LNKRACGML 434
Query: 468 ----------ADGFENAMNILPTGYAA---SYKSGKLLIELSAKLMVLDTMLAVIKMTTD 514
D + A I + AA S L+E S KL+VL ++L ++
Sbjct: 435 NLEGEECDPYGDYSDTASQISSSECAADNIDNVSISALVEESGKLVVLISLLENLR-DEG 493
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSM-TIKKRAKVVETFNKTSNEFIFMLSS 573
+ ++ S + LD+ +++ + + +K +R+DGS+ ++ R K++ F + S+ +F+L++
Sbjct: 494 HRTLVFSQSKKMLDIMQKVLEEKNFKLIRIDGSIRKLEDREKLINKFQRNSSYSVFLLTT 553
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
GG GL L A+R+V+FDP WNPA D QA+ R +R GQKK +YR ++ GS+EEK+ +
Sbjct: 554 GVGGIGLTLTAADRVVIFDPSWNPATDSQAVDRAYRLGQKKTVVIYRLITCGSVEEKIYR 613
Query: 634 RQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTH 676
RQ K +++ +D R+F+ +++ LF+L++ T+S T
Sbjct: 614 RQIFKDSITKQATGSSKDPYRYFTRLDMKELFKLDDPTVSTTQ 656
>gi|340520664|gb|EGR50900.1| predicted protein [Trichoderma reesei QM6a]
Length = 1846
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 168/553 (30%), Positives = 282/553 (50%), Gaps = 51/553 (9%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWT 193
Q + V+ + ++ HQ GV+F++ + V E GC++A MGLGKT+Q IT +
Sbjct: 863 QSFIYVNEEIGKRIKDHQINGVRFLWNQII-VDAETRQGCLLAHTMGLGKTMQVITFLVA 921
Query: 194 LLR---------QGPLAKPL-IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
+L + + K L + +I+ P+ LV NW +EI W + + S
Sbjct: 922 VLEAANSHDESIRAQIPKDLRKSQTVILCPAGLVDNWLDEILMWSPRGLLGNVVKYESAL 981
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETF---RSHASVLHKNEVGLVLCDEGHRLKNCES 300
+ D + ++ + R +LV+ + F ++ + LV+CDE H +K+ ES
Sbjct: 982 KGDAIRLAVIKDWERN--GGVLVLGHTMFWNLDTNVRQILTGAANLVICDEAHAMKSAES 1039
Query: 301 QTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQD 360
++A + + R+ L+G+P+ N++ EY+S++++V LG QEFR Y TPI G
Sbjct: 1040 LLHRACQEFRTRSRIALTGSPLSNNVQEYYSMINWVAPNFLGPIQEFRDIYATPIEHGLW 1099
Query: 361 SCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTN 420
+S ++ +A + LE L V + R T+ ++ LP K E V+ ++ T LQK LY
Sbjct: 1100 KDSSGYDKRRALKLLEVLKMNVAPKVQRATTQVVRHELPAKYEFVIFVEATPLQKRLYD- 1158
Query: 421 LIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA------------ 468
I + + T++ ++ K+ M + + L +CNHP K+ +
Sbjct: 1159 -IYLNEMASTLENAKSKKV-MRVIGASQHLALICNHPRCFRQKVVEASRASAAPQPRGRG 1216
Query: 469 --DGFENAMNILPTGYAASYKSGKLL--------IELSAK----LMVLDTMLAVIKMTTD 514
D E+ ++ + S S L LS K LM+LD AV
Sbjct: 1217 RKDDDEDGASVAAAAFPQSMISAVLKETIGDIANPTLSRKVELLLMILDEARAV-----K 1271
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSK 574
DK+++ S+ TLD L K +G RLDGS + KR + ++ FN +E I+++S++
Sbjct: 1272 DKVLVFSHSILTLDYLGELFKQQGRAVCRLDGSTAVAKRQEQIKAFNTGDSE-IYLISTR 1330
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
AGG GLN+ GANR+V+FD WNP ++ QA+ R +R GQ+K +VY+F+++G+ EE++ +
Sbjct: 1331 AGGVGLNIYGANRVVIFDFRWNPVSEQQAVGRAYRFGQEKTVYVYQFVTSGAFEEQLQNK 1390
Query: 635 QAHKKALSSCVVD 647
K L+S VVD
Sbjct: 1391 NVFKMQLASRVVD 1403
>gi|83771803|dbj|BAE61933.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 939
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 160/570 (28%), Positives = 291/570 (51%), Gaps = 74/570 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL-- 194
+ +DP + ++PHQ G++FM+ + + E+ GC++A MGLGKT+Q I+L+ T+
Sbjct: 279 IYLDPQIGLRVKPHQLNGIQFMWREL--IEDENKQGCLLAHTMGLGKTMQVISLLATISA 336
Query: 195 --------LRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI----DGGSK 242
+RQ A +++I+ PSSL++NW E W + P+ +
Sbjct: 337 AASSDDPKIRQQVPAAFYRSQSLILCPSSLIENWYEEFLMWAPVQSGIGPLRKITTSATM 396
Query: 243 AEIDNKLNSFMQTYGRRPVNPILVISYETFRS---------HASVLHKNEVG-------- 285
E ++ + + G +L++SY+ FR+ L+ N+ G
Sbjct: 397 PERLQEVCDWNEEGG------VLIMSYDIFRTWILNRETNKRGKPLNDNDYGKVRDCLLE 450
Query: 286 ---LVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
+++ DE H++KN + QA M ++K R+ L+G+P+ N+L++Y+++++++ +G LG
Sbjct: 451 GPNIIVADEAHKMKNPATGISQAAMQFRSKSRIALTGSPLANNLIDYYAMINWIAEGYLG 510
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
EF+ ++ PI G ++ ER ++ +L+ L I+ + R ++L+ LP K
Sbjct: 511 EFVEFKAKFVEPITEGLYVDSTYTERRRSLVKLQVLKEILAPKINRADISVLAGSLPTKV 570
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
E V+ + +TDLQK+ Y D+ T+ G+ S + L CNHP D
Sbjct: 571 EFVITVPLTDLQKQAY------DSYVETILQGKGAFGSAQLWSWLAILSLCCNHPSCFRD 624
Query: 463 KIQTGADGFE------NAMNILP----TGYAASYKSGKLL---------------IELSA 497
K+ + A+ + + M ++P A S KL+ +E+S
Sbjct: 625 KLLSRANDAQKINKRLDEMEMIPGDEPIAQAGLPDSEKLVSEQEQIFAKVPDIKALEMSH 684
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
+ ++++++ + DKI++ S+ TLD E + + KY RLDG + R
Sbjct: 685 RARIMNSIIDE-SIRAGDKILVFSHSIPTLDYIEHVLRSSNRKYSRLDGRTPVVTRQDAT 743
Query: 558 ETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCF 617
+ FN S + ++++S++AGG GLN+ ANR+++FD ++P ++QA+ R +R GQ+KP F
Sbjct: 744 KRFNLGSEKQVYLISTRAGGLGLNIPVANRVIIFDFKFSPVWEEQAVGRAYRLGQQKPVF 803
Query: 618 VYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
VYRF++ G+ EE M + K L+ VVD
Sbjct: 804 VYRFIAGGTFEEVMYNKAVFKTQLAFRVVD 833
>gi|452821607|gb|EME28635.1| chromatin remodeling complex / DNA-dep ATPase [Galdieria
sulphuraria]
Length = 1026
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/503 (33%), Positives = 268/503 (53%), Gaps = 49/503 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
+RP+Q EG+ F+ G+ E I+ADEMGLGKTLQ I+L+ L + P
Sbjct: 141 MRPYQLEGLNFL----IGL-YEHGLNGILADEMGLGKTLQTISLLAFLRGYRHINGP--- 192
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILV 266
+I+ P S + NW E KW L G D++ N Q + + + +
Sbjct: 193 -HLIIVPKSTIGNWALEFDKWCPS-FNILRFHGNQ----DDRANLKEQRLLSKDFD-VCL 245
Query: 267 ISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
+YE + L + V+ DE HR+KN S Q + +++ R+LL+GTP+QN+L
Sbjct: 246 TTYEVAIKEKNSLRRFMWRYVIIDEAHRIKNENSILSQVVRTFESQSRLLLTGTPLQNNL 305
Query: 327 LEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCL 386
E ++L++F+ I +A++F + S SD E K NE ++QL ++ L
Sbjct: 306 HELWALLNFLLPDIFASAEDFDSWF--------SSVESDNENAK-NEVIQQLHAVLRPFL 356
Query: 387 IRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS 446
IRR + + LP K E V+ K++ +Q ++Y NL+K D GG+ +L L+
Sbjct: 357 IRRLKSEVEHDLPPKKETVLFTKLSSVQLDIYRNLLKKDIDAINGPGGDRVRL----LNI 412
Query: 447 ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTML 506
+ L+K CNHP L DG E+ ++ P G + +IE KLM+LD +L
Sbjct: 413 LMQLRKCCNHPYLF--------DGVED-RSLDPFG--------EHVIESCGKLMLLDKLL 455
Query: 507 AVIKMTTDDKIVLVSNYTQTLDLFERL--SKLRGYKYVRLDGSMTIKKRAKVVETFNK-T 563
+ ++ + K+++ S T+ LD+ E +R Y Y R+DG+ + R ++E FN+
Sbjct: 456 SRLR-RGNHKVLIFSQMTRMLDILEDYCSPNMRDYPYCRIDGNTEGEIRDSMIEEFNRPD 514
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
S++FIF+LS++AGG G+NL A+ ++++D DWNP D QAM R R GQK P VYR +S
Sbjct: 515 SDKFIFLLSTRAGGLGINLAAADTVILYDSDWNPQVDLQAMDRAHRIGQKNPVNVYRLIS 574
Query: 624 TGSIEEKMMQRQAHKKALSSCVV 646
++EE+++++ K L S V+
Sbjct: 575 ENTVEERILRKALEKLKLDSLVI 597
>gi|356574396|ref|XP_003555334.1| PREDICTED: transcription regulatory protein SNF2-like [Glycine max]
Length = 1073
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 166/520 (31%), Positives = 260/520 (50%), Gaps = 46/520 (8%)
Query: 133 IQVHVVVDPVL--SNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITL 190
IQ V P + LRP+Q EG+++M + I+ADEMGLGKT+Q I+L
Sbjct: 356 IQEKVTEQPSMLQGGELRPYQIEGLQWMLSLFN-----NNLNGILADEMGLGKTIQTISL 410
Query: 191 MWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLN 250
+ L+ + P +IVAP +++ NW NE T W + A+ DG +D +
Sbjct: 411 IAHLMEHKGVTGP----HLIVAPKAVLPNWVNEFTTW-APSITAILYDG----RLDERKA 461
Query: 251 SFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQAL-MGL 309
+ G N +L+ Y+ + L K + ++ DEGHRLKN ES + L G
Sbjct: 462 MKEELSGEGKFN-VLLTHYDLIMRDKAFLKKIQWQYLIVDEGHRLKNHESALARTLDNGY 520
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+RR+LL+GTPIQN L E +SL++F+ I + Q F + P D +D E+
Sbjct: 521 HIQRRLLLTGTPIQNSLQELWSLLNFLLPNIFNSVQNFEDWFNAPFADRVDVSLTDEEQL 580
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
RL Q ++ ++RR + K+LPVK++ ++ M+ QK Y + +D R
Sbjct: 581 LIIRRLHQ---VIRPFILRRKKDEVEKFLPVKSQVILKCDMSAWQKVYYQQV--TDVGRV 635
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ G + L+ L+K CNHP L + G Y+
Sbjct: 636 GLDNGSGKSKSLQNLT--MQLRKCCNHPYLFV-------------------GDYDMYRRK 674
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT 549
+ ++ S K +LD +L ++ +++L S T+ +D E +L +KY+RLDGS
Sbjct: 675 EEIVRASGKFELLDRLLPKLRRAGH-RVLLFSQMTRLMDTLEVYLRLHDFKYLRLDGSTK 733
Query: 550 IKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
++R ++ FN S F+F+LS++AGG GLNL A+ +++FD DWNP D QA R
Sbjct: 734 TEERGNLLRKFNAPDSPYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAH 793
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
R GQKK V+ +S GSIEE +++R K + + V+
Sbjct: 794 RIGQKKEVRVFVLVSVGSIEEVILERAKQKMGIDAKVIQA 833
>gi|268557732|ref|XP_002636856.1| C. briggsae CBR-LET-418 protein [Caenorhabditis briggsae]
Length = 1849
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 157/515 (30%), Positives = 270/515 (52%), Gaps = 56/515 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P+Q EG+ ++ C + + I+ADEMGLGKT+Q +T ++TL+++G P +
Sbjct: 599 LHPYQLEGINWLRHCWS-----NGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFL- 652
Query: 207 KAIIVAPSSLVKNWCNEITKW---------LGGRVAALPIDGGSKAEIDNKLNSFMQTYG 257
I AP S + NW E +W +G R + + + + +D + + + G
Sbjct: 653 ---IAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVDGAVRTGPKA-G 708
Query: 258 RRPVNP-----ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
R +L+ SYET ++L E G ++ DE HRLKN +S ++ L
Sbjct: 709 RMKTTDNLKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 768
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RVLL+GTP+QN+L E F L++F+++ + F ++ +E +K +
Sbjct: 769 YRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEF--------------SEISKED 814
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ +E+L ++ ++RR A + +P K+E +V ++++ +QK+ Y N++ + +K
Sbjct: 815 Q-IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSQMQKKWYKNILTRNFDALNVK 873
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G M+ ++ + LKK CNHP L + K A +N M G L
Sbjct: 874 NGGTQ---MSLMNVLMELKKCCNHPYLFV-KASLEAPKEKNGM-----------YEGTAL 918
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
I+ S K ++L ML +K T ++++ S T +D+ E + GYKY R+DGS+T +
Sbjct: 919 IKNSGKFVLLQKMLRKLK-DTGHRVLIFSQMTMMMDILEDFCDVEGYKYERIDGSITGQM 977
Query: 553 RAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R ++ +N + +F+F+LS++AGG G+NL A+ ++++D DWNP ND QA +R R G
Sbjct: 978 RQDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1037
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
QK +YRF++ S+EE++ K L+ VV
Sbjct: 1038 QKHKVMIYRFVTKNSVEERITTVAKKKMLLNHLVV 1072
>gi|431914423|gb|ELK15680.1| DNA excision repair protein ERCC-6-like protein [Pteropus alecto]
Length = 1265
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 287/585 (49%), Gaps = 76/585 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 121 LHDQLFEHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 171
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P+SL+ W E KW G RV G SK E L G
Sbjct: 172 SLVNHVLLIMPTSLISTWVKEFDKWTPGMRVKTF--HGPSKDERTRNLRRIQHRNG---- 225
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L E V+ DE H++K +++ + A R+L
Sbjct: 226 --VIITTYQMLINNWQQLSSLDGQEFVWDYVILDEAHKIKTSSTKSALCARAVPASNRIL 283
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 284 LTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKALGLKIS 343
Query: 376 EQLIGIVNRCLIRRTSALLSKYLP------------------------VKTEQVVCIKMT 411
E L+ I+ +RRT + K P K + ++ I++
Sbjct: 344 ENLMAIIKPYFLRRTKEEVQKKQPGDPEVRLSEKNPGVDATNEMPSLSRKNDLIIWIRLV 403
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI------- 464
LQ+E+Y + D ++ + T+ + L+ + LKKLC+HP L+ +
Sbjct: 404 PLQEEIYRKFVSLDHIKELLM---ETR---SPLAELGILKKLCDHPRLLSARACHLLNLE 457
Query: 465 -------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKI 517
G D + ++ + S + L++ S K++ L +L ++ +
Sbjct: 458 DVTFPVEDEGEDKEASDVDHI------SQVTDVTLMKESGKMIFLMDLLERLRDEGHQTL 511
Query: 518 VLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAG 576
V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+++++ G
Sbjct: 512 VF-SQSRQILNIIERLLKNRHFKILRIDGTITHLVEREKRINLFQQNKDYSVFLITTQVG 570
Query: 577 GCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQA 636
G GL L A R+V+FDP WNPA D QA+ R R GQ++ VYR ++ G++EEK+ +RQ
Sbjct: 571 GVGLTLTAATRVVIFDPSWNPATDAQAVDRAHRIGQRENVVVYRLITCGTVEEKIYRRQV 630
Query: 637 HKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
K +L +++ R+FS ELR LF +E+ S T +++
Sbjct: 631 FKDSLIRQTTGDKKNPFRYFSKQELRELFAIEDFQKSATQLQLQS 675
>gi|221055808|ref|XP_002259042.1| snf2 family n-terminal domain [Plasmodium knowlesi strain H]
gi|193809113|emb|CAQ39815.1| snf2 family n-terminal domain, putative [Plasmodium knowlesi strain
H]
Length = 1382
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 166/525 (31%), Positives = 274/525 (52%), Gaps = 51/525 (9%)
Query: 125 LLKIDKDKIQVHVVVDPV-LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGK 183
LLK ++ + ++ P ++ ++P+Q EG+ ++Y+ I+ADEMGLGK
Sbjct: 279 LLKDANEEDETFIMKQPANINGCMKPYQIEGLNWLYQLY-----RHKINGILADEMGLGK 333
Query: 184 TLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKA 243
TLQ I+L+ L K + K+II+ P S + NW EI KW + A G +
Sbjct: 334 TLQTISLLCYL----RFNKNIKRKSIIICPRSTLDNWYQEIKKWCT-EMKAFKYYGNKEE 388
Query: 244 EIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTY 303
+ N Y +L+ +YE + L + ++ DE HR+KN +S
Sbjct: 389 RRELNKNVLHTDY------DVLLTTYEIVIKDKNALFDIDWFFLVIDEAHRIKNDKSVLS 442
Query: 304 QALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCA 363
++ L+++ R+L++GTP+ N+L E +SL++F+ I ++EF + + D+
Sbjct: 443 TSVRFLRSENRLLITGTPLHNNLKELWSLLNFLMPKIFDNSEEFDNLFNISKISSNDN-- 500
Query: 364 SDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLI- 422
K +E + QL I+ ++RR + + LP K E V + M+ LQK+LY++++
Sbjct: 501 ------KQSEIITQLHTILKPFMLRRLKMEVEQCLPPKREIYVFVGMSKLQKKLYSDILS 554
Query: 423 KSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGY 482
K+ V M G +N L + + L+K CNHP L DG E
Sbjct: 555 KNIDVINAMTGSKNQMLNI-----LMQLRKCCNHPYLF--------DGIE---------- 591
Query: 483 AASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYV 542
Y G LIE S K+ +LD +L +K + +++L S T+ LD+ + + + Y+Y+
Sbjct: 592 EPPYIEGNHLIETSGKMSLLDKLLPRLK-KENSRVLLFSQMTRVLDIIDDYCRWKKYEYL 650
Query: 543 RLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDD 601
R+DGS +R + FN+ S FIF+LS++AGG G+NL A+ +++FD D+NP D
Sbjct: 651 RIDGSTVGDERQIRINQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDI 710
Query: 602 QAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
QAM R R GQKK VYRF++ ++EEK+++R A K L S ++
Sbjct: 711 QAMDRAHRIGQKKKVIVYRFVTQNTVEEKIVERAAKKLKLDSLII 755
>gi|357608812|gb|EHJ66159.1| putative DNA excision repair protein ERCC-6 [Danaus plexippus]
Length = 734
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 146/496 (29%), Positives = 263/496 (53%), Gaps = 29/496 (5%)
Query: 179 MGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPID 238
MGLGKT+Q I + L + + II++P++++ W + W A+
Sbjct: 1 MGLGKTVQVIAFLAGLSMTDSGSWGGLGPCIILSPATVIYQWVSHFHYWFPQIRVAVLHH 60
Query: 239 GGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNC 298
GS A +KL M + + IL+++Y + L + ++ DEGH+++N
Sbjct: 61 SGSHAGSHHKLIRDMHS-----SHGILLVTYAGIVKYIKDLLSRKWHYIILDEGHKIRNP 115
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
++Q + + + ++L++G+P+QN L E +SL F+ G+LG+ F + + PI +G
Sbjct: 116 DTQVSKMVKRFETSHKLLITGSPMQNSLQELWSLFDFMRPGLLGSHTAFMEHFAVPITQG 175
Query: 359 QDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKY--LPVKTEQVVCIKMTDLQKE 416
+ AS+ + A E + L ++ ++RRT + + LP K EQV+ +T QK+
Sbjct: 176 GYANASEFQEATALEIAKALKNLITPYMLRRTKTEVQDHIQLPEKNEQVLFCSLTQEQKD 235
Query: 417 LYTNLIKSDAVRRTM----KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
LY + S +R + K GE + + L ++++L+K+CNHPD+ + + +E
Sbjct: 236 LYMGYLMSSTIRSILDKDSKHGEPMRARI--LVALSTLRKICNHPDIYL------YEAYE 287
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER 532
+I + +SGK+ + S L I + + ++ + L + E+
Sbjct: 288 ETDDIDEKSFGNWKRSGKMSVVHS---------LLKIWLKQGHRALIFTQSRAMLCILEQ 338
Query: 533 LSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
+ +KY+R+DGS+ + R +++T+N+ +F+ +++ GG G+NL GA+R++++D
Sbjct: 339 HLQNHSFKYLRMDGSVNVGVRQNLIKTYNENPEYLVFLATTRVGGLGVNLTGADRVIIYD 398
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPA D+QA R WR GQ++ VYR LS G+IEEK+ QRQ K LS+ ++ + +
Sbjct: 399 PDWNPATDNQAKERAWRIGQERNVTVYRLLSAGTIEEKIYQRQIFKNFLSNKIL-IDPNQ 457
Query: 653 ARHFSMSELRSLFQLE 668
+ S L+SLF LE
Sbjct: 458 KNVLTTSNLQSLFSLE 473
>gi|224081014|ref|XP_002306264.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222855713|gb|EEE93260.1| chromatin remodeling complex subunit [Populus trichocarpa]
Length = 1058
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/565 (29%), Positives = 291/565 (51%), Gaps = 72/565 (12%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
++ +L PHQREG+++++ G I+ D+MGLGKT+Q + + G
Sbjct: 362 TIAKMLYPHQREGLRWLWSLHC-----QGKGGILGDDMGLGKTMQICSFL-----AGLFH 411
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
LI +A++VAP +L+ +W E++ +G G S D +L +Q G
Sbjct: 412 SKLIKRALVVAPKTLLSHWIKELS-VVGLSAKTREYFGTSLKARDYELQYILQDKG---- 466
Query: 262 NPILVISYETFRSHASVLHKNEVGL------------VLCDEGHRLKNCESQTYQALMGL 309
IL+ +Y+ R+++ L + + ++ DEGH +KN +Q ++L+ +
Sbjct: 467 --ILLTTYDIVRNNSKSLRGDHYFIDDESEDSYIWDYMILDEGHLIKNPSTQRAKSLLEI 524
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ +++SGTPIQN+L E ++L +F G+LG + F++ YE PILRG + ASD E+
Sbjct: 525 PSAHCIVISGTPIQNNLKELWALFNFCCPGLLGDNKWFKETYEHPILRGNEKNASDREKR 584
Query: 370 KANERLEQLIGIVNRCLIRR-----------TSALLSKYLPVKTEQVVCIKMTDLQKELY 418
+ ++L + +RR T+A LS+ K E +V +++T Q++LY
Sbjct: 585 IGSTVAKELRERIQPYFLRRMKNEVFKEDDATTAKLSR----KNEIIVWLRLTACQRQLY 640
Query: 419 TNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGA-DGFENAMNI 477
++S+ V G + L+++T LKK+C+HP L+ + +G E+ +N
Sbjct: 641 EAFLRSEIVLSAFDG--------SPLAALTILKKICDHPLLLTKRAAEDLLEGMESMLN- 691
Query: 478 LPTGYAASYKSGKLLIE---------------LSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
P A + K L + +S K+ + ++L + + +++ S
Sbjct: 692 -PEDAAVAEKLAMHLADVADRTDTDFQEKHDNISCKISFILSLLDNL-IPEGHNVLIFSQ 749
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
+ L+L + GY+++R+DG+ R K+V F + + IF+L+S+ GG GL L
Sbjct: 750 TRKMLNLIQESLVSNGYEFIRIDGTTKATDRTKIVSDFQEGNGAPIFLLTSQVGGLGLTL 809
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A+R+++ DP WNP+ D+Q++ R +R GQ K VYR ++ GS+EEK+ ++Q K L
Sbjct: 810 TKADRVIVVDPAWNPSTDNQSVDRAYRIGQMKDVVVYRLMTCGSVEEKIYRKQIFKGGLF 869
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+ +E + R+FS +LR LF L
Sbjct: 870 RTATENKEQI-RYFSQQDLRELFSL 893
>gi|118089662|ref|XP_420329.2| PREDICTED: probable global transcription activator SNF2L1 [Gallus
gallus]
Length = 1031
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 262/507 (51%), Gaps = 51/507 (10%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V LR +Q G+ +M E+ I+ADEMGLGKTLQ I L+ L +
Sbjct: 151 VKGGTLRDYQVRGLNWMISLY-----ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIP 205
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
P +++ P S + NW NE +W+ R L D ++A +F++
Sbjct: 206 GP----HMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARA-------AFIRDVMMPG 254
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+ V SYE SV K ++ DE HR+KN +S+ + + K R+LL+GT
Sbjct: 255 EWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 314
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN+L E ++L++F+ + +A +F ++T +C D + +E+L
Sbjct: 315 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDT------KNCLGD------QKLVERLHA 362
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
++ L+RR A + K LP K E + + ++ +Q+E YT ++ D + G+ K
Sbjct: 363 VLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKD-IDILNSAGKMDK-- 419
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M L+ + L+K CNHP L DG E Y + LI S K++
Sbjct: 420 MRLLNILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDTHLITNSGKML 462
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
VLD +LA ++ +++L S T+ LD+ E RGY+Y RLDG ++R + ++TF
Sbjct: 463 VLDKLLAKLR-EQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTF 521
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N S++FIFMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQKKP V+
Sbjct: 522 NAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 581
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
R ++ ++EE++++R K L S V+
Sbjct: 582 RLITDNTVEERIVERAEIKLRLDSIVI 608
>gi|255550546|ref|XP_002516323.1| ATP binding protein, putative [Ricinus communis]
gi|223544553|gb|EEF46070.1| ATP binding protein, putative [Ricinus communis]
Length = 1109
Score = 246 bits (627), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 165/565 (29%), Positives = 287/565 (50%), Gaps = 77/565 (13%)
Query: 143 LSNILRPHQREGVKFMY--ECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPL 200
++ +L PHQR+G+K+++ C+ G I+ D+MGLGKT+Q + L
Sbjct: 397 IATMLYPHQRDGLKWLWSLHCL-------GKGGILGDDMGLGKTMQICGFLAGLFHS--- 446
Query: 201 AKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
LI +A++VAP +L+ +W E+ +G G S +L +Q G
Sbjct: 447 --RLIKRALVVAPKTLLAHWIKELAA-VGLSRKTREYFGTSLKARQYELQYILQDKG--- 500
Query: 261 VNPILVISYETFRSHASVLHKNEV------------GLVLCDEGHRLKNCESQTYQALMG 308
IL+ +Y+ R+++ L ++ ++ DEGH +KN +Q ++L+
Sbjct: 501 ---ILLTTYDIVRNNSKSLRGDDYFADEESEDGYTWDYMILDEGHLIKNPSTQRAKSLLE 557
Query: 309 LKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAER 368
+ + R+++SGTPIQN+L E ++L +F +LG F+K+YE PILRG + AS E+
Sbjct: 558 IPSAHRIIISGTPIQNNLKELWTLFNFSCPNLLGDYNGFKKKYEHPILRGNEKNASAREK 617
Query: 369 TKANERLEQLIGIVNRCLIRR-----------TSALLSKYLPVKTEQVVCIKMTDLQKEL 417
+ ++L + +RR T+A LSK K E +V +++T Q+EL
Sbjct: 618 HVGSTIAKELRERIQPYFLRRLKNEVFKEDDLTTATLSK----KNEMIVWLRLTSCQREL 673
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-----------MDKIQT 466
Y ++S+ V G + L+++T LKK+C+HP L+ MD I
Sbjct: 674 YRAFLQSELVLSAFDG--------SPLAALTILKKICDHPLLLTKRAAEDVLEGMDFISP 725
Query: 467 GADGFEN--AMNILPTGYAASY--KSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
G A+++ A + K + ++S + +LD ++ +++ S
Sbjct: 726 EDAGLAEKLALHVADVAEKAEFQEKHDNISCKISFIMSLLDNLIP-----EGHNVLIFSQ 780
Query: 523 YTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNL 582
+ L+L + GY+++R+DG+ R K+V F + IF+L+S+ GG GL L
Sbjct: 781 SRKMLNLIQDSLASNGYEFLRIDGTTKASDRVKIVNDFQEGVGAPIFLLTSQVGGLGLTL 840
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
A+R+++ DP WNP+ D+Q++ R +R GQ+K VYR ++ G++EEK+ ++Q K L
Sbjct: 841 TKADRVIVVDPAWNPSTDNQSVDRAYRIGQRKDVLVYRLMTCGTVEEKIYRKQIFKGGLF 900
Query: 643 SCVVDCEEDVARHFSMSELRSLFQL 667
+ +E + R+FS +LR LF L
Sbjct: 901 KTATEHKEQI-RYFSQQDLRELFSL 924
>gi|145355576|ref|XP_001422035.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582274|gb|ABP00329.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 589
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 169/540 (31%), Positives = 270/540 (50%), Gaps = 50/540 (9%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
+R +Q +GV +M ++ I+AD+MGLGKT+Q I + L +G L L+
Sbjct: 22 MRDYQLKGVNWMISLY-----QNGLNGILADQMGLGKTVQTIGFLSHLRSKGVLGPYLV- 75
Query: 207 KAIIVAPSSLVKNWCNEITKWLGGRVAALPI--DGGSKAEIDNKLNSFMQTYGR-RPVNP 263
+ P S + NW +E +W ++P+ G++ E K F+ T +P P
Sbjct: 76 ----IGPLSTLSNWVSEFQRW----TPSIPVLLYHGTRQERAEKRIEFLPTSTPIKPDFP 127
Query: 264 ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQ 323
++V SYE + L K ++ DEGHRLKN + + + L + ++LL+GTP+Q
Sbjct: 128 VIVTSYEVVMADRKFLAKYNFKYLVVDEGHRLKNFDCKLIRELKYIPTANKLLLTGTPLQ 187
Query: 324 NDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER------LEQ 377
N+L E +SL+HF+ + + +F+ ++ G D + + E NE+ + +
Sbjct: 188 NNLPELWSLLHFLLPDVFSSLSQFQSWFDFADNIGNDE-SQEQEVVDKNEQEHRARVVSK 246
Query: 378 LIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK--GGE 435
L GI+ L+RR + LP K E ++ +M QKE L+ K G
Sbjct: 247 LHGILRPFLLRRLKGDVELSLPRKKEILLYAQMVPKQKEFNDALVNKTITEMLTKFAGNS 306
Query: 436 NTKLGMTALSS-ITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIE 494
+ +G TA+++ + L+K CNHPDL I G DG + + S L+E
Sbjct: 307 HIPVGHTAVNNMLMQLRKNCNHPDL----ITGGLDG------------SIMFPSADELVE 350
Query: 495 LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRA 554
K+ +LD ++ ++ K+++ S T+ LDL E + RG R+DGS+ R
Sbjct: 351 QCGKMQLLDRLMTRLR-ARGHKVLIFSQMTRMLDLLESFFQQRGEPVCRIDGSVKQDDRR 409
Query: 555 KVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKK 614
+ + FN+ IF+LS++AGG G+NL G + ++++D DWNP D QAM RV R GQ K
Sbjct: 410 EFIARFNEDPKYGIFLLSTRAGGLGINLTGGDTVIIYDSDWNPHQDLQAMDRVHRIGQTK 469
Query: 615 PCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC------EEDVARHFSMSELRSLFQLE 668
P VYR + S+E KM+++ A K AL VV + D R F EL +L + E
Sbjct: 470 PVHVYRLATAKSVEGKMLKKAASKLALEKLVVTNGGFKQEKNDDGRAFGADELMALLKGE 529
>gi|326924536|ref|XP_003208483.1| PREDICTED: probable global transcription activator SNF2L1-like
[Meleagris gallopavo]
Length = 1043
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 262/507 (51%), Gaps = 51/507 (10%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V LR +Q G+ +M E+ I+ADEMGLGKTLQ I L+ L +
Sbjct: 163 VKGGTLRDYQVRGLNWMISLY-----ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIP 217
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
P +++ P S + NW NE +W+ R L D ++A +F++
Sbjct: 218 GP----HMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARA-------AFIRDVMMPG 266
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+ V SYE SV K ++ DE HR+KN +S+ + + K R+LL+GT
Sbjct: 267 EWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 326
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN+L E ++L++F+ + +A +F ++T +C D + +E+L
Sbjct: 327 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDT------KNCLGD------QKLVERLHA 374
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
++ L+RR A + K LP K E + + ++ +Q+E YT ++ D + G+ K
Sbjct: 375 VLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKD-IDILNSAGKMDK-- 431
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M L+ + L+K CNHP L DG E Y + LI S K++
Sbjct: 432 MRLLNILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDTHLITNSGKML 474
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
VLD +LA ++ +++L S T+ LD+ E RGY+Y RLDG ++R + ++TF
Sbjct: 475 VLDKLLAKLR-EQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTF 533
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N S++FIFMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQKKP V+
Sbjct: 534 NAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 593
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
R ++ ++EE++++R K L S V+
Sbjct: 594 RLITDNTVEERIVERAEIKLRLDSIVI 620
>gi|258572168|ref|XP_002544846.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905116|gb|EEP79517.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1932
Score = 245 bits (626), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 174/593 (29%), Positives = 299/593 (50%), Gaps = 74/593 (12%)
Query: 137 VVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLR 196
+ +DP + ++ HQ G++FM+ + ++ E GC++A MGLGKT+Q I+L+ T+
Sbjct: 975 IYLDPHIGRRVKQHQLHGMQFMWREL--IKDEKRQGCLLAHTMGLGKTMQVISLLVTIAN 1032
Query: 197 ----QGP-LAKPLID-----KAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEID 246
Q P L K + D + +I+ PSSL++NW E W G ++ G +
Sbjct: 1033 VANSQDPELRKQIPDTFRESRTLILCPSSLIENWWEEFLMWRPGDPESVSNLGPIR---- 1088
Query: 247 NKLNSFMQTYGR-------RPVNPILVISYETFRS------------------HASVLHK 281
K+ M+ + R +L++SY+ FR+ H ++ +
Sbjct: 1089 -KILQSMEPWERLKEIAAWHSEGGVLLLSYDIFRAFILNRATKSRGSSLGAKVHETIKKQ 1147
Query: 282 --NEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQG 339
+ +++ DE H++KN + +A G K+K R+ L+G+P+ N L EY+S+++++ G
Sbjct: 1148 LLDGPNIIVADEAHKMKNRNTGIAEAASGFKSKSRIALTGSPLANHLEEYYSMINWIAPG 1207
Query: 340 ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLP 399
LG +F+ +Y PI G ++ AER ++ +RL+ L ++ + R ++L LP
Sbjct: 1208 YLGDFVQFKAKYVEPIEAGLYRESTRAERRESLKRLQVLKKDLDPKVNRADISVLKGDLP 1267
Query: 400 VKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
K E V+ + +T +Q+E Y + T+ G++ + + L LCNHP
Sbjct: 1268 PKVEFVITLPLTAIQEEAYKIYVA------TLSTGKDDVPNARLWAWLAILSLLCNHPSC 1321
Query: 460 VMDKI--------QTGA----------DGFENAMNILPTGYAASYKSGKLLIEL-SAKLM 500
M+KI Q G D ++ + P + + + +L S L
Sbjct: 1322 FMEKILKKNRDKKQQGVLQDSENESVIDDITDSQTLGPEVIKEVQRVFEGISDLKSTALS 1381
Query: 501 VLDTMLAVI---KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
TML I ++ DK+++ S+ TL+ E + K G+ Y RLDG+ I R
Sbjct: 1382 HRATMLEQIVKESVSAGDKVLVFSHSIPTLNYLEHILKQNGWTYCRLDGTTPISSRQVAT 1441
Query: 558 ETFNKTSNEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
+ FN+T + ++++S+KAGG GLN+ GANR+++FD +NP ++QA+ R +R GQ KP
Sbjct: 1442 KYFNRTDSPMQVYLISTKAGGLGLNIPGANRVIIFDFAFNPTWEEQAVGRAYRFGQTKPV 1501
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
FVYRF+S G+ E+ M R K LS V+D + + R+ S S+ LF +E
Sbjct: 1502 FVYRFVSGGTYEDAMYNRTVFKTQLSFRVIDKKNPI-RYASKSKKAYLFPPKE 1553
>gi|400602704|gb|EJP70306.1| SNF2 family chromodomain-helicase DNA-binding protein [Beauveria
bassiana ARSEF 2860]
Length = 1674
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 163/512 (31%), Positives = 264/512 (51%), Gaps = 59/512 (11%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLL----RQGPLAK 202
LRP Q G+ F+ C+ R I+ADEMGLGKT+Q ++ + L ++GP
Sbjct: 472 LRPFQLRGLNFL--CLNWCR---GNNVILADEMGLGKTVQTVSFLSWLRNCRKQEGP--- 523
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKW---LGGRVAALPIDGGSKAEIDNKLNSFMQTYGRR 259
+++VAP S++ WC+ W L V P D + +N+L + ++
Sbjct: 524 -----SLVVAPLSVIPAWCDTFNNWSPDLNYVVYLGPEDARNIIR-ENEL--LVDGNPKK 575
Query: 260 PVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSG 319
P +LV SYE L + ++ DE HRLKN ESQ Y L+G +VL++G
Sbjct: 576 PKFNVLVTSYEFILQDWQFLQSIKFQVLAVDEAHRLKNSESQLYMRLVGFGIPCKVLITG 635
Query: 320 TPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
TPIQN+L E +L+ F+N G + Q+ D+ A+ A E+L++L
Sbjct: 636 TPIQNNLSELAALLDFLNPGKVKIDQDL------------DTLAA----VDAQEKLQELH 679
Query: 380 GIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD--AVRRTMKGGENT 437
+ ++RRT + LP KTE+++ ++++D+Q + Y N++ + A+ G +N+
Sbjct: 680 SAIAPYILRRTKETVESDLPPKTEKIIRVELSDVQLDYYKNILTRNYAALSDASSGHKNS 739
Query: 438 KLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSA 497
L + + LKK+ NHP + F A + G K LI S
Sbjct: 740 LLNI-----MMELKKISNHPYM-----------FPGAEERVLAGSIRREDQIKGLITSSG 783
Query: 498 KLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVV 557
K+M+LD +L+ +K ++++ S + LD+ LRGYK+ RLDG++ R +
Sbjct: 784 KMMLLDQLLSKLKKDGH-RVLIFSQMVKMLDILGDYMSLRGYKFQRLDGTIAAGPRRMAI 842
Query: 558 ETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPC 616
FN S +F F+LS++AGG G+NL+ A+ +++FD DWNP D QAMAR R GQK+P
Sbjct: 843 NHFNADDSEDFCFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKRPV 902
Query: 617 FVYRFLSTGSIEEKMMQRQAHKKALSSCVVDC 648
+YR +S ++EE++++R +K L +
Sbjct: 903 NIYRLVSKETVEEEVLERARNKLLLEYLTIQA 934
>gi|353235188|emb|CCA67205.1| related to RDH54-protein required for mitotic diploid-specific
recombination and repair and meiosis [Piriformospora
indica DSM 11827]
Length = 519
Score = 245 bits (626), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 220/405 (54%), Gaps = 35/405 (8%)
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
+GL++CDEGHRLK S+T Q L+ RR++LSGTPIQNDL E+ ++V F N +L
Sbjct: 16 IGLIVCDEGHRLKTAGSKTSQMFKALRTPRRIILSGTPIQNDLGEFHAMVEFCNPTLLDD 75
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
F++ +E PIL + S R L + ++RR +++LS YLP K E
Sbjct: 76 YSVFKRLFEAPILASRLPDCSPKAREAGEVCAMHLKRLAKSFVLRREASILSNYLPPKYE 135
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
VV I T LQ + L+ D + + G L + I +L KLCN P L+ K
Sbjct: 136 YVVFITPTKLQLSMMQELLHPDRL-HYLTGNTARSLAL-----IQTLSKLCNSPLLLRHK 189
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
+ +G A+ +LP G A S + LS KL L ++L +K TTD+K ++VSNY
Sbjct: 190 -EDADEGLRAALRLLPPGAAPSD------VSLSGKLQALSSILKELKSTTDEKCIIVSNY 242
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NE-FIFMLSSKAGGCGLN 581
T TL++ E + Y + RLDG KR + V+ FNK+S NE F+F+LS+KAGG G++
Sbjct: 243 TSTLNIVEAFCTKQRYTFFRLDGQTPQVKRQEYVDKFNKSSQNERFLFLLSTKAGGVGMS 302
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
++D QAMAR+ RDGQK+P F+YR L+ G+I+EK+ QRQ K L
Sbjct: 303 ----------------SHDLQAMARIHRDGQKRPVFIYRLLTAGTIDEKIYQRQITKIGL 346
Query: 642 SSCV----VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
S + V + F+ ELR LF + + TH+ + C+
Sbjct: 347 SDAMMGNSVRGGKSKTDSFTNRELRDLFNIYPDVACHTHELLGCA 391
>gi|85109522|ref|XP_962958.1| hypothetical protein NCU07837 [Neurospora crassa OR74A]
gi|28924603|gb|EAA33722.1| hypothetical protein NCU07837 [Neurospora crassa OR74A]
Length = 1150
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 172/567 (30%), Positives = 275/567 (48%), Gaps = 85/567 (14%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ V+++ E G I+ DEMGLGKT
Sbjct: 397 YQKTSVQWLAELYA-----QQVGGIVGDEMGLGKT------------------------- 426
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNK--LNSFMQTYGRRPVNP--- 263
AP+++++ W NE +W RV+ L G + N+ L+ YG+R
Sbjct: 427 --APATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVRNEGALDDREDDYGKRKPKKSSQ 484
Query: 264 --------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+LV +Y +++ +L + G + DEGH+++N + L
Sbjct: 485 AAKKIVDRVVKHGHVLVTTYAGLQTYGDILIPVDWGYAVLDEGHKIRNPNTAITIYCKEL 544
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI G + A++ +
Sbjct: 545 RTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQFEIPIKLGGYANATNLQIM 604
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
A + E L ++ L++R ++ LP K+EQV+ K++ Q+E Y +KSD +
Sbjct: 605 TAQKCAETLKETISPYLLQRLKVDVAADLPKKSEQVLFCKLSKPQREAYELFLKSDDMTA 664
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ + L I L+K+CNHPDL+ +++ SYK G
Sbjct: 665 ILNRTRQS------LYGIDILRKICNHPDLLDPRLKDDP----------------SYKWG 702
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR-GYKYVRLDGSM 548
S K+ V+ ++L + K K +L TQ LD+ E + + G Y+R+DG
Sbjct: 703 S--TSKSGKMAVVKSLLPMWKRLGH-KTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKT 759
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
+K R +V+ FN + +F+L++K GG G NL GANR+++FDPDWNP+ D QA R W
Sbjct: 760 PVKDRQTLVDQFNNDPDLHLFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERAW 819
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQL 667
R GQKK +YR ++ G+IEEK+ RQ K+ LS+ V+ D ++ + F++++L LF L
Sbjct: 820 RLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTS--FNLNDLHDLFSL 877
Query: 668 EENTISDTHDKIKCSRCVNGIQVKPPP 694
S K + + G +VK P
Sbjct: 878 S----SYEDGKTETAELFKGSEVKRLP 900
>gi|222629845|gb|EEE61977.1| hypothetical protein OsJ_16754 [Oryza sativa Japonica Group]
Length = 1678
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 160/558 (28%), Positives = 290/558 (51%), Gaps = 60/558 (10%)
Query: 145 NILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
N+L PHQREG+++++ V R G I+ D+MGLGKT+Q + G L
Sbjct: 278 NMLYPHQREGLRWLW--VLHCR---GTGGILGDDMGLGKTMQVSAFL-----AGLFHSRL 327
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
I + ++VAP +L+ +W E++ V +L + + ++ Y + I
Sbjct: 328 IKRVLVVAPKTLLTHWTKELS------VVSLKDKIRDYSGPNANARNYELKYAFKE-GGI 380
Query: 265 LVISYETFRSHASVLHKNEVG-----------LVLCDEGHRLKNCESQTYQALMGLKAKR 313
L+ +Y+ R++ ++ N V+ DEGH +KN ++Q Q+L +
Sbjct: 381 LLTTYDIVRNNFKMIKGNFTNDFDDEEETLWNYVILDEGHIIKNPKTQRAQSLFEIPCAH 440
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
R+++SGTPIQN+L E ++L +F +LG ++F+ +YE I++G D A++ ++ +
Sbjct: 441 RIVISGTPIQNNLKEMWALFYFCCPEVLGDKEQFKARYEHAIIQGNDKNATNRQKHIGSN 500
Query: 374 RLEQLIGIVNRCLIRRTSALL--------SKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
++L + +RR + K L K E ++ +K+T Q++LY + S+
Sbjct: 501 VAKELRERIKPYFLRRMKNEVFLDSGTGEDKKLAKKNELIIWLKLTSCQRQLYEAFLNSE 560
Query: 426 AVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGADGFEN-------- 473
V +M+G + L++IT LKK+C+HP L+ K + G D N
Sbjct: 561 LVHSSMQG--------SPLAAITILKKICDHPLLLTKKAAEGVLEGMDAMLNNQEMGMVE 612
Query: 474 --AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
AMN+ + ++ ++S KL + ++L + ++ +++ S + L++ +
Sbjct: 613 KMAMNLADMAHDDDDVELQVGQDVSCKLSFMMSLLQNL-VSEGHNVLIFSQTRKMLNIIQ 671
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L GYK++R+DG+ I +R ++V+ F + IF+L+++ GG GL L A R+++
Sbjct: 672 EAIILEGYKFLRIDGTTKISERERIVKDFQEGPGAPIFLLTTQVGGLGLTLTKAARVIVV 731
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DP WNP+ D+Q++ R +R GQ K VYR +++G+IEEK+ + Q K AL + +E
Sbjct: 732 DPAWNPSTDNQSVDRAYRIGQMKDVIVYRLMTSGTIEEKIYKLQVFKGALFRTATEHKEQ 791
Query: 652 VARHFSMSELRSLFQLEE 669
R+FS +++ LF L E
Sbjct: 792 T-RYFSKRDIQELFSLPE 808
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 127/249 (51%), Gaps = 19/249 (7%)
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
L++ LY + D VR + L ++L + T L+K+C+HP L++ K T D F
Sbjct: 1212 LKRRLYEAFLNKDPVR-----SQTGALKGSSLEASTILRKICDHP-LLLTKRDT--DDFL 1263
Query: 473 NAMNILPTGYAAS----------YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSN 522
M + Y +L I A + + + + + VL+ +
Sbjct: 1264 EEMGAMLNNRDMCMVERILEDNLYADKRLQIVQGASCKIAFILPLLRNLVEEGHYVLIFS 1323
Query: 523 YTQT-LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLN 581
T+ L+L + + G+K++R+DG+ I +R K+++ F + + I +L+S GG G
Sbjct: 1324 QTRVMLNLIQDAVSIEGHKFLRIDGTTKISERKKILKDFQEGLDSPILLLTSHVGGLGNT 1383
Query: 582 LIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKAL 641
L A+R+++ DP WNP+ D+Q++ R +R GQ K VYR ++ G+IEEK+ ++Q K L
Sbjct: 1384 LTKADRVIVVDPAWNPSIDNQSVDRAYRIGQTKDVIVYRLVTCGTIEEKIYKQQIFKGGL 1443
Query: 642 SSCVVDCEE 650
+C+E
Sbjct: 1444 FRTATECKE 1452
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDL 326
V+ DEGH +KN ++Q Q+L + + R++L+GTPIQN L
Sbjct: 1173 VILDEGHIVKNTKTQRAQSLFQIPSAHRIVLTGTPIQNKL 1212
>gi|449273767|gb|EMC83176.1| putative global transcription activator SNF2L1, partial [Columba
livia]
Length = 982
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 262/507 (51%), Gaps = 51/507 (10%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V LR +Q G+ +M E+ I+ADEMGLGKTLQ I L+ L +
Sbjct: 102 VKGGTLRDYQVRGLNWMISLY-----ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIP 156
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
P +++ P S + NW NE +W+ R L D ++A +F++
Sbjct: 157 GP----HMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARA-------AFIRDVMMPG 205
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
+ V SYE SV K ++ DE HR+KN +S+ + + K R+LL+GT
Sbjct: 206 EWDVCVTSYEMVIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGT 265
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
P+QN+L E ++L++F+ + +A +F ++T +C D + +E+L
Sbjct: 266 PLQNNLHELWALLNFLLPDVFNSADDFDSWFDT------KNCLGD------QKLVERLHA 313
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
++ L+RR A + K LP K E + + ++ +Q+E YT ++ D + G+ K
Sbjct: 314 VLKPFLLRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKD-IDILNSAGKMDK-- 370
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M L+ + L+K CNHP L DG E Y + LI S K++
Sbjct: 371 MRLLNILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDTHLITNSGKML 413
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
VLD +LA ++ +++L S T+ LD+ E RGY+Y RLDG ++R + ++TF
Sbjct: 414 VLDKLLAKLR-EQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREEAIDTF 472
Query: 561 NK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
N S++FIFMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQKKP V+
Sbjct: 473 NAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVF 532
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
R ++ ++EE++++R K L S V+
Sbjct: 533 RLITDNTVEERIVERAEIKLRLDSIVI 559
>gi|336469238|gb|EGO57400.1| hypothetical protein NEUTE1DRAFT_121828 [Neurospora tetrasperma
FGSC 2508]
gi|350291129|gb|EGZ72343.1| hypothetical protein NEUTE2DRAFT_90539 [Neurospora tetrasperma FGSC
2509]
Length = 1150
Score = 245 bits (625), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 171/564 (30%), Positives = 274/564 (48%), Gaps = 85/564 (15%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
+Q+ V+++ E G I+ DEMGLGKT
Sbjct: 397 YQKTSVQWLAELYA-----QQVGGIVGDEMGLGKT------------------------- 426
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNK--LNSFMQTYGRRPVNP--- 263
AP+++++ W NE +W RV+ L G + N+ L+ YG+R
Sbjct: 427 --APATVLRQWVNEFHRWWPPLRVSILHSSGSGMLNVRNEGALDDREDDYGKRKPKKSSQ 484
Query: 264 --------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
+LV +Y +++ +L + G + DEGH+++N + L
Sbjct: 485 AAKKIVDRVVKHGHVLVTTYAGLQTYGDILIPVDWGYAVLDEGHKIRNPNTAITIYCKEL 544
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+ RV+LSGTP+QN+L E +SL F+ LGT FR Q+E PI G + A++ +
Sbjct: 545 RTPNRVILSGTPMQNNLTELWSLFDFIYPMRLGTLVAFRNQFEIPIKLGGYANATNLQIM 604
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
A + E L ++ L++R ++ LP K+EQV+ K++ Q+E Y +KSD +
Sbjct: 605 TAQKCAETLKETISPYLLQRLKVDVAADLPKKSEQVLFCKLSKPQREAYELFLKSDDMTA 664
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSG 489
+ + L I L+K+CNHPDL+ +++ SYK G
Sbjct: 665 ILNRTRQS------LYGIDILRKICNHPDLLDPRLKDDP----------------SYKWG 702
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR-GYKYVRLDGSM 548
S K+ V+ ++L + K K +L TQ LD+ E + + G Y+R+DG
Sbjct: 703 S--TSKSGKMAVVKSLLPMWKRLGH-KTLLFCQGTQMLDIIEAFVRRQDGINYLRMDGKT 759
Query: 549 TIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVW 608
+K R +V+ FN + +F+L++K GG G NL GANR+++FDPDWNP+ D QA R W
Sbjct: 760 PVKDRQTLVDQFNNDPDLHLFLLTTKVGGLGTNLTGANRVIIFDPDWNPSTDVQARERAW 819
Query: 609 RDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV-DCEEDVARHFSMSELRSLFQL 667
R GQKK +YR ++ G+IEEK+ RQ K+ LS+ V+ D ++ + F++++L LF L
Sbjct: 820 RLGQKKEVTIYRLMTAGTIEEKIYHRQIFKQFLSNKVLKDPKQQTS--FNLNDLHDLFSL 877
Query: 668 EENTISDTHDKIKCSRCVNGIQVK 691
S K + + G +VK
Sbjct: 878 S----SYEDGKTETAELFKGSEVK 897
>gi|341900249|gb|EGT56184.1| hypothetical protein CAEBREN_32223 [Caenorhabditis brenneri]
Length = 1816
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 158/514 (30%), Positives = 264/514 (51%), Gaps = 54/514 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P+Q EG+ ++ C + + I+ADEMGLGKT+Q +T ++TL+++G P +
Sbjct: 619 LHPYQLEGINWLRHCWS-----NGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFL- 672
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP-- 263
I AP S + NW E +W V D S+ + SF++ R
Sbjct: 673 ---IAAPLSTIINWEREAEQWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVRSGPKAGK 729
Query: 264 ----------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKR 313
+L+ SYET ++L E G ++ DE HRLKN +S ++ L
Sbjct: 730 MKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHY 789
Query: 314 RVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANE 373
RVLL+GTP+QN+L E F L++F++ + F ++ +E +K ++
Sbjct: 790 RVLLTGTPLQNNLEELFHLLNFLSAERFNQLEAFTAEF--------------SEISKEDQ 835
Query: 374 RLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG 433
+E+L ++ ++RR A + +P K+E +V ++++ +QK+ Y N++ + +K
Sbjct: 836 -IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILTRNFDALNVKN 894
Query: 434 GENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLI 493
G M+ ++ + LKK CNHP L F A P Y+ G LI
Sbjct: 895 GGTQ---MSLMNVLMELKKCCNHPYL-----------FAKASLEAPKEKNGMYE-GTALI 939
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ + K ++L ML +K ++++ S T LD+ E + GYKY R+DGS+T + R
Sbjct: 940 KNAGKFVLLQKMLRKLK-EQGHRVLIFSQMTMMLDIMEDFCDVEGYKYERIDGSITGQMR 998
Query: 554 AKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
++ +N + +F+F+LS++AGG G+NL A+ ++++D DWNP ND QA +R R GQ
Sbjct: 999 QDAIDRYNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQ 1058
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
K +YRF++ GS+EE++ K L+ VV
Sbjct: 1059 KHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVV 1092
>gi|308501284|ref|XP_003112827.1| CRE-LET-418 protein [Caenorhabditis remanei]
gi|308267395|gb|EFP11348.1| CRE-LET-418 protein [Caenorhabditis remanei]
Length = 1884
Score = 245 bits (625), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 161/516 (31%), Positives = 265/516 (51%), Gaps = 58/516 (11%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P+Q EG+ ++ C + + I+ADEMGLGKT+Q +T ++TL+++G P +
Sbjct: 598 LHPYQLEGINWLRHCWS-----NGTDAILADEMGLGKTVQSLTFLYTLMKEGHCKGPFL- 651
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNP-- 263
I AP S + NW E W V D S+ + SF++ R P
Sbjct: 652 ---IAAPLSTIINWEREAELWCPDFYVVTYVGDRDSRVVLREHEFSFVEGAVR--TGPKA 706
Query: 264 ------------ILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+L+ SYET ++L E G ++ DE HRLKN +S ++ L
Sbjct: 707 GKMKTTENMKFHVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTI 766
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
RVLL+GTP+QN+L E F L++F+++ + F ++ +E +K
Sbjct: 767 HYRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEF--------------SEISKE 812
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
++ +E+L ++ ++RR A + +P K+E +V ++++ +QK+ Y N++ + +
Sbjct: 813 DQ-IEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSPMQKKWYKNILTRNFDALNV 871
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
K G M+ ++ + LKK CNHP L + K A +N M G
Sbjct: 872 KNGGTQ---MSLMNVLMELKKCCNHPYLFV-KASLEAPKEKNGM-----------YEGTA 916
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
LI+ S K +L ML +K ++++ S T LD+ E + GYKY R+DGS+T +
Sbjct: 917 LIKNSGKFALLQKMLRKLK-DGGHRVLIFSQMTMMLDIMEDFCDVEGYKYERIDGSITGQ 975
Query: 552 KRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
R ++ +N + +FIF+LS++AGG G+NL A+ ++++D DWNP ND QA +R R
Sbjct: 976 MRQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRL 1035
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
GQK +YRF++ GS+EE++ K L+ VV
Sbjct: 1036 GQKHKVMIYRFVTKGSVEERITSVAKKKMLLNHLVV 1071
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,776,652,652
Number of Sequences: 23463169
Number of extensions: 500129029
Number of successful extensions: 1408599
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 13629
Number of HSP's successfully gapped in prelim test: 2023
Number of HSP's that attempted gapping in prelim test: 1330586
Number of HSP's gapped (non-prelim): 32366
length of query: 755
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 604
effective length of database: 8,816,256,848
effective search space: 5325019136192
effective search space used: 5325019136192
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 81 (35.8 bits)