BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5647
(755 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P70270|RAD54_MOUSE DNA repair and recombination protein RAD54-like OS=Mus musculus
GN=Rad54l PE=1 SV=2
Length = 747
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/762 (61%), Positives = 566/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL++R PED PG T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLARRKPEDRSSDDEDWQPGTVT---PKKRKSSSETQVQECFLSPFRKPLTQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N + P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 LN------RPPCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEEGALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VEKWLGGRIQPLAIDGGSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGN 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+ +D+ AS+A+R + ERL +LIGIVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKSRDAAASEADRQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ ++ G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPEEELREG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGFE + I P G Y S + +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVAEEDGFEGTLGIFPPG----YNSKAVEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L ++R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN QV PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+KR L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQR 744
>sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens
GN=RAD54L PE=1 SV=2
Length = 747
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/762 (61%), Positives = 565/762 (74%), Gaps = 40/762 (5%)
Query: 1 RRSLAPSQLSKRSPED--------SPGIKTFPPPVKKEKRSCTS---------RKPLGSV 43
RRSLAPSQL+KR PE PG+ T P K++ S T RKPL +
Sbjct: 2 RRSLAPSQLAKRKPEGRSCDDEDWQPGLVT---PRKRKSSSETQIQECFLSPFRKPLSQL 58
Query: 44 DNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKAL 103
N+ P + S+HE IR IL+KPFKVPI NY G ++ALG++R G R+AL
Sbjct: 59 TNQP------PCL--DSSQHEAFIRSILSKPFKVPIPNYQGP-LGSRALGLKRAGVRRAL 109
Query: 104 HDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVT 163
HDP +ALVLY PP LSAHD LK+DK+K+ VHVVVDP+LS +LRPHQREGVKF++ECVT
Sbjct: 110 HDPLEKDALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVT 169
Query: 164 GVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP IDKA++V+PSSLVKNW NE
Sbjct: 170 SRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNE 229
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNE 283
+ KWLGGR+ L IDGGSK EID KL FM G R +PIL+ISYETFR H VL K
Sbjct: 230 VGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVSSPILIISYETFRLHVGVLQKGS 289
Query: 284 VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGT 343
VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFVN GILGT
Sbjct: 290 VGLVICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGT 349
Query: 344 AQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTE 403
A EF+K +E PIL+G+D+ AS+A+R ERL +L IVNRCLIRRTS +LSKYLPVK E
Sbjct: 350 AHEFKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIE 409
Query: 404 QVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK 463
QVVC ++T LQ ELY ++ + G K+ +++LSSITSLKKLCNHP L+ DK
Sbjct: 410 QVVCCRLTPLQTELYKRFLRQAKPAEELLEG---KMSVSSLSSITSLKKLCNHPALIYDK 466
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
DGF A+++ P GY+ S L +LS K++VLD +LAV + + DK+VLVSNY
Sbjct: 467 CVEEEDGFVGALDLFPPGYS----SKALEPQLSGKMLVLDYILAVTRSRSSDKVVLVSNY 522
Query: 524 TQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKAGGCGLNL 582
TQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ +F+FMLSSKAGGCGLNL
Sbjct: 523 TQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFVFMLSSKAGGCGLNL 582
Query: 583 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALS 642
IGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LS G+IEEK+ QRQ+HKKALS
Sbjct: 583 IGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALS 642
Query: 643 SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDD 702
SCVVD E+DV RHFS+ EL+ LF L+E ++SDTHD++ C RCVN Q++PPP SDCT D
Sbjct: 643 SCVVDEEQDVERHFSLGELKELFILDEASLSDTHDRLHCRRCVNSRQIRPPPDGSDCTSD 702
Query: 703 LSCWHHVTEKRWLVDPILKHCWGA---GVSFVFYQHSTKAEK 741
L+ W+H T+K L D +L+ W A ++FVF+Q S + ++
Sbjct: 703 LAGWNHCTDKWGLRDEVLQAAWDAASTAITFVFHQRSHEEQR 744
>sp|O12944|RAD54_CHICK DNA repair and recombination protein RAD54-like (Fragment)
OS=Gallus gallus GN=RAD54L PE=2 SV=1
Length = 733
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/706 (65%), Positives = 544/706 (77%), Gaps = 17/706 (2%)
Query: 37 RKPLGSVDNEDEPNSKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRR 96
RKPL + N P+ + S+HE IR IL+KPFKVPI NY G +ALG++R
Sbjct: 41 RKPLTQLTNR-------PLCLDS-SQHEAFIRSILSKPFKVPIPNYKGP-TGLRALGIKR 91
Query: 97 EGARKALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVK 156
G R LHDP ALVLY PP LSAH+ LKIDKDK+ VHVVVDPVLS +LRPHQREGVK
Sbjct: 92 AGLRSPLHDPFEEGALVLYEPPLLSAHEQLKIDKDKVPVHVVVDPVLSRVLRPHQREGVK 151
Query: 157 FMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSL 216
F+++CVT RI ++GCIMADEMGLGKTLQCITLMWTLLRQ P KP I+KA++V+PSSL
Sbjct: 152 FLWDCVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPDCKPEIEKAMVVSPSSL 211
Query: 217 VKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHA 276
V+NW NE+ KWLGGR+ L IDGGSK EID KL M G R +PIL+ISYETFR HA
Sbjct: 212 VRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRGLRVPSPILIISYETFRLHA 271
Query: 277 SVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFV 336
L K VGLV+CDEGHRLKN E+QTYQAL L RRVL+SGTPIQNDLLEYFSLVHFV
Sbjct: 272 EALQKGSVGLVICDEGHRLKNSENQTYQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFV 331
Query: 337 NQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSK 396
N GILGTAQEF++ +E PIL+G+D+ AS+AER K ERL++LI IVNRCLIRRTS +LSK
Sbjct: 332 NSGILGTAQEFKRHFELPILKGRDADASEAERQKGEERLKELISIVNRCLIRRTSDILSK 391
Query: 397 YLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNH 456
YLPVK EQVVC ++T LQ ELY N +K +K G K+ +++LSSITSLKKLCNH
Sbjct: 392 YLPVKIEQVVCCRLTPLQAELYKNFLKQAKPVEELKEG---KINVSSLSSITSLKKLCNH 448
Query: 457 PDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDK 516
P L+ DK +GF A+++ P GY+ + + +LS K++VLD +LAV K T++DK
Sbjct: 449 PALIYDKCVEEEEGFMGALDLFPAGYS----TKSVEPQLSGKMLVLDYILAVTKSTSNDK 504
Query: 517 IVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSN-EFIFMLSSKA 575
+VLVSNYTQTLDLFE+L + R Y YVRLDG+M+IKKRAKVVE FN S+ EFIFMLSSKA
Sbjct: 505 VVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKVVERFNSPSSPEFIFMLSSKA 564
Query: 576 GGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQ 635
GGCGLNLIGANRLVMFDPDWNPAND+QAMARVWRDGQKK C++YR LSTG+IEEK+ QRQ
Sbjct: 565 GGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKIFQRQ 624
Query: 636 AHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPL 695
HKKALSSCVVD E+DV RHFS+ EL+ LF L E TISDTHDKIKC RCVNG QV+PPP
Sbjct: 625 THKKALSSCVVDEEQDVERHFSLGELKELFSLNETTISDTHDKIKCRRCVNGHQVRPPPE 684
Query: 696 ESDCTDDLSCWHHVTEKRWLVDPILKHCWGAGVSFVFYQHSTKAEK 741
SDCT DLS W+H +KR L D +LK W A V+F F+ HS + ++
Sbjct: 685 GSDCTSDLSQWNHCADKRGLQDSVLKAAWDAAVTFTFHHHSHEEQR 730
>sp|B4KHL5|RAD54_DROMO DNA repair and recombination protein RAD54-like OS=Drosophila
mojavensis GN=okr PE=3 SV=1
Length = 783
Score = 879 bits (2272), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/762 (56%), Positives = 547/762 (71%), Gaps = 16/762 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCT---SRKPLGSVDNEDEPNSKLPMT 56
RRSLAPSQ R F PP+ KK KR C ++ D + LP+
Sbjct: 2 RRSLAPSQ---RLGVRIKSKDAFTPPLQKKNKRVCQEELQKRQSALRDATNRVELPLPIR 58
Query: 57 KEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYT 116
SE+E I ++LA+ FKVPI NY + LGVRR R+ALHDP A NALVLY
Sbjct: 59 FTANSEYEQAIAKVLARKFKVPIANYVPDYGGNRTLGVRRTIVRRALHDPQACNALVLYV 118
Query: 117 PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMA 176
PP + H+ + +D K+QVHVVVDP+LSN+LRPHQREGV+FMYECV G R + GCIMA
Sbjct: 119 PPAYTEHERMSMDPSKVQVHVVVDPILSNVLRPHQREGVRFMYECVEGKR-GNFNGCIMA 177
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP 236
DEMGLGKTLQC+TL WTLLRQ P KP I KAIIV+PSSLVKNW E TKWL GR+ L
Sbjct: 178 DEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCLA 237
Query: 237 IDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
++GGSK + L F R P+L+ISYETFR +A +L K EVG+V+CDEGHRLK
Sbjct: 238 MEGGSKEDTTRALEQFAMNTATRCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLK 297
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E IL
Sbjct: 298 NSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSIL 357
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
RGQ++ ++DAER +A ++ ++LIG+VN+C+IRRT+ +L+KYLPVK E VVC+K+T +Q +
Sbjct: 358 RGQNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQLQ 417
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
+YTN +KSD VRR++ N K +TAL+ IT+LKKLCNHPDL+ +KI GFEN+ N
Sbjct: 418 IYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKLCNHPDLIYEKIAAKEKGFENSQN 476
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
+LP +YK + ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE+L++
Sbjct: 477 VLP----PNYKPKDVNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARK 532
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
R Y YVRLDG+MTIKKR+KVV+ FN S + F+FMLSSKAGGCGLNLIGANRL MFDPDW
Sbjct: 533 RKYTYVRLDGTMTIKKRSKVVDRFNDPSTDCFLFMLSSKAGGCGLNLIGANRLFMFDPDW 592
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E +H
Sbjct: 593 NPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESSEKH 652
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWL 715
F+ +L+ LF E N +SDTH+K+KC RC +Q +PP +DCT LS W H + R L
Sbjct: 653 FTRDDLKDLFSFEANVLSDTHNKLKCKRCFQDVQRQPPAENTDCTSHLSQWFHCSNNRGL 712
Query: 716 VDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
D IL W A VSFVF+ S K +TE++E E+++
Sbjct: 713 PDSILSQAWTASKCVSFVFHHRSQAESKPAAITEDDESEQQQ 754
>sp|B4M9A8|RAD54_DROVI DNA repair and recombination protein RAD54-like OS=Drosophila
virilis GN=okr PE=3 SV=1
Length = 786
Score = 867 bits (2240), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/763 (56%), Positives = 547/763 (71%), Gaps = 17/763 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCT---SRKPLGSVDNEDEPNSKLPMT 56
RRSLAPSQ R F PP+ KK KR C ++ D + LP+
Sbjct: 2 RRSLAPSQ---RLGVRIKSKDAFTPPLQKKNKRVCQIELQKRQSALRDATNTVELPLPIR 58
Query: 57 KEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYT 116
S++E I ++LA+ FKVPI NY + LGVRR R+ALHDP A NALVLYT
Sbjct: 59 FTANSDYEQAIAKVLARKFKVPIANYVPDYGGNRTLGVRRSIVRRALHDPQACNALVLYT 118
Query: 117 PPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMA 176
PP + H+ + +D K+QVHVVVDP+LSN+LRPHQREGV+FMYECV G R + GCIMA
Sbjct: 119 PPAYTEHERMSLDPSKLQVHVVVDPILSNVLRPHQREGVRFMYECVEGKR-GNFNGCIMA 177
Query: 177 DEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALP 236
DEMGLGKTLQC+TL WTLLRQ P KP I KAI+V+PSSLVKNW E TKWL GR+ L
Sbjct: 178 DEMGLGKTLQCVTLTWTLLRQSPDCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCLA 237
Query: 237 IDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLK 296
++GGSK + L F R P+L+ISYETFR ++ +L K EVG+V+CDEGHRLK
Sbjct: 238 MEGGSKEDTTRTLEQFAMNTATRCGTPVLLISYETFRLYSHILCKTEVGMVICDEGHRLK 297
Query: 297 NCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPIL 356
N ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGT +F++ +E IL
Sbjct: 298 NSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAIL 357
Query: 357 RGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
RGQ++ ++DAER +A E+ ++L+G+VN+C+IRRT+ +L+KYLPVK E VVC K+T +Q +
Sbjct: 358 RGQNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQ 417
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMN 476
LYTN +KSD VRR++ + K +TAL+ IT+LKKLCNHPDL+ +KI GFEN+ N
Sbjct: 418 LYTNFLKSDQVRRSLADCTD-KTTLTALADITTLKKLCNHPDLIYEKIAAREKGFENSQN 476
Query: 477 ILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKL 536
+LP +YK + ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE+L++
Sbjct: 477 VLP----PNYKPKDVNPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARK 532
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
R Y YVRLDG+MTIKKR+KVV+ FN + + F+FMLSSKAGGCGLNLIGANRL MFDPDW
Sbjct: 533 RKYSYVRLDGTMTIKKRSKVVDRFNDPATDCFLFMLSSKAGGCGLNLIGANRLFMFDPDW 592
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARH 655
NPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D + +H
Sbjct: 593 NPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSSIIDNNDSAEKH 652
Query: 656 FSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWL 715
F+ +L+ LF+ E N +SDTH+K+KC RC +Q +PPP SDCT LS W H + R L
Sbjct: 653 FTRDDLKDLFRFEANVLSDTHNKLKCKRCFQDVQRQPPPENSDCTSHLSQWFHCSNNRGL 712
Query: 716 VDPILKHCWGAG--VSFVFYQHST-KAEKSKVVTEEEEKEEEE 755
D IL W A VSFVF+ S A++ +TE+ E+ +
Sbjct: 713 PDSILSQAWMASKCVSFVFHHRSQGDAKQPTCITEDNHSEQPQ 755
>sp|B4JCS7|RAD54_DROGR DNA repair and recombination protein RAD54-like OS=Drosophila
grimshawi GN=okr PE=3 SV=1
Length = 786
Score = 866 bits (2238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/759 (56%), Positives = 544/759 (71%), Gaps = 15/759 (1%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---RKPLGSVDNEDEPNSKLPMTK 57
RRSLAPSQ + PP +KK KR+C ++ D + LP+
Sbjct: 2 RRSLAPSQRLGVRIKSKDAFT--PPLLKKNKRACQQELEKRQSALRDATNIVELPLPIRF 59
Query: 58 EEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTP 117
SE+E I ++LA+ FKVPI NY ++LGVRR R+ALHDP A NALVL+TP
Sbjct: 60 TANSEYEQAIAKVLARKFKVPIANYVPDYGGNRSLGVRRSIVRRALHDPLACNALVLFTP 119
Query: 118 PQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMAD 177
P + H+ + +D K+QVHVVVDP+LSN+LRPHQREGV+FMYECV G R GCIMAD
Sbjct: 120 PVYTEHERMSLDPSKLQVHVVVDPLLSNVLRPHQREGVRFMYECVEGKR-GSFNGCIMAD 178
Query: 178 EMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPI 237
EMGLGKTLQC+TL WTLLRQ KP I KAI+V+PSSLVKNW E TKWL GR+ L +
Sbjct: 179 EMGLGKTLQCVTLTWTLLRQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCLAM 238
Query: 238 DGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKN 297
+GGSK E L F R P+L+ISYETFR +A +L K EVG+V+CDEGHRLKN
Sbjct: 239 EGGSKEETTRTLEQFAMNTSTRCGTPVLLISYETFRLYAHILCKTEVGMVICDEGHRLKN 298
Query: 298 CESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILR 357
++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E ILR
Sbjct: 299 SDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILR 358
Query: 358 GQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKEL 417
GQ++ ++D ER +A + ++LIG+VN+C+IRRT+ +L+KYLPVK E VVC K+T +Q ++
Sbjct: 359 GQNADSTDTERERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQI 418
Query: 418 YTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI 477
YTN +KSD V R++ N K +TALS IT+LKKLCNHPDL+ +K+ GFEN+ N+
Sbjct: 419 YTNFLKSDQVCRSLADC-NEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKGFENSQNV 477
Query: 478 LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLR 537
LP A+YK + ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE+L++ R
Sbjct: 478 LP----ANYKPKDINPELSGKFMLLDFMLAAIRANSDDKVVLISNYTQTLDLFEQLARKR 533
Query: 538 GYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWN 596
Y YVRLDG+MTIKKR+KVV+ FN S++ F+FMLSSKAGGCGLNLIGANRL MFDPDWN
Sbjct: 534 KYSYVRLDGTMTIKKRSKVVDRFNDPSSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWN 593
Query: 597 PANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHF 656
PAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E V +HF
Sbjct: 594 PANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESVEKHF 653
Query: 657 SMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEKRWLV 716
+ +L+ LF E N +SDTH+K+KC RC +Q +PP +DCT LS W H + R L
Sbjct: 654 TRDDLKDLFSFEANVLSDTHNKLKCKRCFQDVQRQPPADNTDCTSHLSQWFHCSNNRGLP 713
Query: 717 DPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
D IL W A VSFVF+ H ++AE T +E EE
Sbjct: 714 DTILSQAWTASKCVSFVFH-HRSQAEAKPAATTTDEDEE 751
>sp|B4MX21|RAD54_DROWI DNA repair and recombination protein RAD54-like OS=Drosophila
willistoni GN=okr PE=3 SV=1
Length = 784
Score = 864 bits (2233), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 436/766 (56%), Positives = 555/766 (72%), Gaps = 26/766 (3%)
Query: 1 RRSLAPSQ-LSKRSPEDSPGIKTFPPPV--KKEKRSCTSRKPLGSVDN--EDEPNSK--- 52
RRSLAPSQ L R + + F PP+ KK KR+C + D NS
Sbjct: 2 RRSLAPSQRLGVRLQPN----QEFTPPLLQKKNKRTCQQEQEQLQCQFALRDATNSNGSI 57
Query: 53 -LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNA 111
LP+ SE+E I ++LA+ FKVPI NY + LGVRR R+ALHDP A NA
Sbjct: 58 PLPIRFTANSEYELAIAKVLARKFKVPIANYVPDYGGNRCLGVRRSIVRRALHDPQACNA 117
Query: 112 LVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAY 171
LVLYTPP S H+ +K+D KI VHVVVDP+LSNILRPHQREGV+FMY+CV G + +
Sbjct: 118 LVLYTPPVYSEHERMKMDPTKILVHVVVDPLLSNILRPHQREGVRFMYDCVEGKK-GNFN 176
Query: 172 GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGR 231
GCIMADEMGLGKTLQC+TL+WTLLRQ KP I KAIIV+PSSLVKNW E TKWL GR
Sbjct: 177 GCIMADEMGLGKTLQCVTLVWTLLRQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGR 236
Query: 232 VAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+ L ++GGSK + L F R P+L+ISYETFR +A++L +NEVG+V+CDE
Sbjct: 237 MHCLAMEGGSKEDTIKALEQFSMNTSTRLGTPVLLISYETFRIYANILCQNEVGMVICDE 296
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +
Sbjct: 297 GHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNF 356
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+GQ++ +SD ER +A E+ ++LIG+VN+C+IRRT+ +L+KYLPVK E V+C+++T
Sbjct: 357 ENPILKGQNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLT 416
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
+Q E YTN +KSD VRR++ N K +TAL+ IT+LKKLC+HPDL+ +K+ GF
Sbjct: 417 SVQLEFYTNFLKSDKVRRSLADC-NEKASLTALADITTLKKLCSHPDLIYEKMLARDKGF 475
Query: 472 ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE 531
EN+ NILPT +YK L ELS K M+LD MLA I+ +DDK+VL+SNYTQTLDLFE
Sbjct: 476 ENSQNILPT----NYKPKDLNPELSGKFMLLDFMLATIRANSDDKVVLISNYTQTLDLFE 531
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANRLVM 590
+L++ R Y +VRLDG+MTIKKR+KVV+ FN N+ F+FMLSSKAGGCGLNLIGANRL M
Sbjct: 532 QLARKRKYTFVRLDGTMTIKKRSKVVDRFNDPENDCFLFMLSSKAGGCGLNLIGANRLFM 591
Query: 591 FDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEE 650
FDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E
Sbjct: 592 FDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNE 651
Query: 651 DVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVT 710
+HF+ +L+ LF + +SDTH+K+KC RC+ +Q KPPP ++DCT LS W H +
Sbjct: 652 SAEKHFTRDDLKDLFSFDSKILSDTHEKLKCKRCLQNVQTKPPPEDTDCTSHLSQWFHCS 711
Query: 711 EKRWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEEE 754
R L D IL W A VSFVF+ S +++ + E EE ++E
Sbjct: 712 NNRGLPDDILAQAWTASKCVSFVFHHRS----QAQAIKESEETKQE 753
>sp|O76460|RAD54_DROME DNA repair and recombination protein RAD54-like OS=Drosophila
melanogaster GN=okr PE=1 SV=1
Length = 784
Score = 861 bits (2224), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/768 (56%), Positives = 557/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC R+ LG++ D +
Sbjct: 2 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSE 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSARLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+ +K+ G
Sbjct: 418 TAIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIYEKLTAREKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ +YK L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPS----NYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + N +SDTHDK+KC RCV IQ+KPPP ++DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ EEE ++ E
Sbjct: 713 SNNRGLPDNILAQAWMDCKCVSFVFH-HRSQAQEIVPSAEEEATDQPE 759
>sp|B4NXB8|RAD54_DROYA DNA repair and recombination protein RAD54-like OS=Drosophila
yakuba GN=okr PE=3 SV=2
Length = 784
Score = 858 bits (2218), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/768 (55%), Positives = 555/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC RK ++ D + +
Sbjct: 2 RRSLAPSQRGPMRPESRHSFT--PPLLKKNKRSCQQELEREQELDRKRQSALRDASNTMD 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYERAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPVACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFNPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSSRLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ +++ ER +A E+ ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ N K +TAL+ IT+LKK+C+HPDL+ +KI G
Sbjct: 418 TSIQLELYTNFLKSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIYEKITAREKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ +Y + L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPS----NYNTKDLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + + +SDTH+K+KC RCV +QVKPPP +DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDADILSDTHEKLKCKRCVQNVQVKPPPDNTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCWG--AGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ + EE E+ E
Sbjct: 713 SNNRGLPDNILAQAWTDCKCVSFVFH-HRSQAQEIVAIAEEAASEQPE 759
>sp|B3NAN8|RAD54_DROER DNA repair and recombination protein RAD54-like OS=Drosophila
erecta GN=okr PE=3 SV=1
Length = 784
Score = 855 bits (2208), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/768 (55%), Positives = 553/768 (72%), Gaps = 23/768 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPVKKEKRSCTS---------RKPLGSV-DNEDEPN 50
RRSLAPSQ PE PP +KK KRSC RK ++ D +
Sbjct: 2 RRSLAPSQRGPLRPESRHSFT--PPLLKKNKRSCQQELEREQELDRKRQSALRDASNTLE 59
Query: 51 SKLPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPN 110
LP+ SE+E I ++LA+ FKVP+ NY + LGVRR +R+ LHDP A N
Sbjct: 60 LPLPIRFTANSEYERAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPVACN 119
Query: 111 ALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDA 170
ALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G R +
Sbjct: 120 ALVLFHPPAYTEHERMGMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNF 178
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
GCIMADEMGLGKTLQC+TL+WTLLRQGP KP I+KAI+V+PSSLVKNW E TKWL G
Sbjct: 179 NGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQG 238
Query: 231 RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCD 290
R+ LP++GG+K L F T R P+L+ISYETFR +A +L K EVG+V+CD
Sbjct: 239 RLLCLPMEGGTKENTIRALEQFSMTSSRLGT-PVLLISYETFRIYAEILCKYEVGMVICD 297
Query: 291 EGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQ 350
EGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EY+SLV+FVN +LGTA F++
Sbjct: 298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRN 357
Query: 351 YETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKM 410
+E+ ILRGQ++ ++DAER +A + ++LIG+V++C+IRRT+ +L+KYLPVK E V+C K+
Sbjct: 358 FESAILRGQNTDSTDAERQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKL 417
Query: 411 TDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADG 470
T +Q ELYTN +KSD VRR++ + K +TAL+ IT+LKK+C+HP+L+ +KI G
Sbjct: 418 TSIQLELYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKICSHPNLIYEKITARDKG 476
Query: 471 FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLF 530
FEN+ N+LP+ Y A L ELS K M+LD MLA I+ +DK+VL+SNYTQTLDLF
Sbjct: 477 FENSQNVLPSNYNAK----DLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLF 532
Query: 531 ERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLV 589
E+L++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL
Sbjct: 533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D
Sbjct: 593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNN 652
Query: 650 EDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHV 709
E +HF+ +L+ LF + + +SDTHDK+KC RCV IQ+KPPP ++DCT LS W+H
Sbjct: 653 ESAEKHFTRDDLKDLFTFDADILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHC 712
Query: 710 TEKRWLVDPILKHCW--GAGVSFVFYQHSTKAEKSKVVTEEEEKEEEE 755
+ R L D IL W VSFVF+ H ++A++ EE E+ E
Sbjct: 713 SNNRGLPDNILAQAWMDCKCVSFVFH-HRSQAQEIVASAEEAASEQPE 759
>sp|B3MMA5|RAD54_DROAN DNA repair and recombination protein RAD54-like OS=Drosophila
ananassae GN=okr PE=3 SV=1
Length = 791
Score = 836 bits (2159), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 418/757 (55%), Positives = 543/757 (71%), Gaps = 27/757 (3%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV--KKEKRSCTSRKPLGSVDNEDEPNSK------ 52
RRSLAPSQ R + + F PP+ KK KR+C L + +ED+ +
Sbjct: 2 RRSLAPSQ---RIGQSTASRNAFTPPLLQKKNKRACQKDLRLDTDADEDKERKRFGLRDA 58
Query: 53 ------LPMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDP 106
LP+ S +E I Q+LA+ FKVPI NY + LGVRR R+ LHDP
Sbjct: 59 TNSEIPLPIRFTANSAYELAIAQVLARKFKVPIDNYVPDYGGNRCLGVRRVVVRRPLHDP 118
Query: 107 TAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVR 166
A NALVL+ PP + H+ + +D K+ VHVVVDP+LSNILRPHQREGV+FMYECV G +
Sbjct: 119 QACNALVLFQPPNYTEHERMSMDPSKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKK 178
Query: 167 IEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITK 226
D GCIMADEMGLGKTLQC+TL+WTLLRQGP +KP I+KAI+V+PSSLVKNW E TK
Sbjct: 179 -GDFNGCIMADEMGLGKTLQCVTLVWTLLRQGPESKPTINKAIVVSPSSLVKNWEKEFTK 237
Query: 227 WLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGL 286
WL GR+ L ++GG+K L F T + P+L+ISYETFR +A +L K EVG+
Sbjct: 238 WLQGRLLCLAMEGGTKENTIRVLEQFSMTSSKLGT-PVLLISYETFRIYAEILCKYEVGM 296
Query: 287 VLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQE 346
V+CDEGHRLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +
Sbjct: 297 VICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAAD 356
Query: 347 FRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVV 406
F++ +E ILRGQ++ +++ ER KA E+ ++LIG+V++C+IRRT+ +L+KYLP+K E V+
Sbjct: 357 FKRNFENSILRGQNADSTEGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVI 416
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT 466
C+K+T +Q +LYTN + SD VRR++ N K +TAL+ IT+LKK+C+HPDL+ KI+
Sbjct: 417 CVKLTAIQLQLYTNFLNSDQVRRSLADC-NEKASLTALADITTLKKICSHPDLIHQKIEA 475
Query: 467 GADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQT 526
GFEN+ N+LP+ +YK ++ E S K M+LD MLA I+ +DK+VL+SNYTQT
Sbjct: 476 KEKGFENSQNVLPS----NYKPKEICPEWSGKFMLLDFMLAAIRAAGNDKVVLISNYTQT 531
Query: 527 LDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGA 585
LDLFE+L++ R Y +VRLDG+M+IKKR+KVV+ FN +E F+FMLSSKAGGCGLNLIGA
Sbjct: 532 LDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDKFNDPDSECFLFMLSSKAGGCGLNLIGA 591
Query: 586 NRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCV 645
NRL MFDPDWNPAND+QAMARVWRDGQKKPC++YR +++G+IEEK++QRQ HKK+LSS +
Sbjct: 592 NRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTI 651
Query: 646 VDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSC 705
+D E +HF+ +L+ LF ++ +SDTH+K+KC RCV IQ KPP +DCT LS
Sbjct: 652 IDNNESSEKHFTRDDLKDLFSFDQKILSDTHEKLKCKRCVQNIQTKPPSESTDCTSHLSQ 711
Query: 706 WHHVTEKRWLVDPILKHCWGAG--VSFVFYQHSTKAE 740
W+H + R L D IL W VSFVF+ S E
Sbjct: 712 WYHCSNNRGLPDSILAQAWTDSKCVSFVFHHRSQAKE 748
>sp|Q29KH2|RAD54_DROPS DNA repair and recombination protein RAD54-like OS=Drosophila
pseudoobscura pseudoobscura GN=okr PE=3 SV=2
Length = 782
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/763 (54%), Positives = 541/763 (70%), Gaps = 19/763 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCTS---RKPLGSVDNEDEPNSK---L 53
RRSLAPSQ R + F PP+ KK KR+C ++ L D N+ L
Sbjct: 2 RRSLAPSQ---RGGQRLSSRNDFTPPLLKKNKRACQQDLEQERLRQSALRDATNTSDLPL 58
Query: 54 PMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
P+ +E+E I ++LA+ FKVPI NY + LGVRR R+ LHDP A NALV
Sbjct: 59 PIRFTANTEYEMAIAKVLARKFKVPIDNYVPDYGGNRTLGVRRRIVRRPLHDPLACNALV 118
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
LY P + H+ + ++ + VHVVVDP+LSNILRPHQREGV+FMYECV G R + GC
Sbjct: 119 LYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGC 177
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQC+ L+WTLL+Q KP I+K IIV+PSSLVKNW E TKWL GR+
Sbjct: 178 IMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMH 237
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
L ++GGSK L F R P+L+ISYETFR +A +L K EVG+V+CDEGH
Sbjct: 238 CLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGMVICDEGH 297
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E
Sbjct: 298 RLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFEN 357
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
ILRGQ++ ++D ER +A E+ ++LI +V++C+IRRT+ +L+KYLPVK E V+C K+T +
Sbjct: 358 CILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPI 417
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q +LYTN +KSD VRR++ + K +TAL+ IT+LKKLC+HP+L+ +KI GFEN
Sbjct: 418 QLQLYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKLCSHPNLICEKIAAEEKGFEN 476
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ NILP Y G++ ELS K +LD MLA I+ +DK+VL+SNYTQTLDLFE+L
Sbjct: 477 SQNILPINYNP---KGEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFEQL 533
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL MFD
Sbjct: 534 ARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFD 593
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E
Sbjct: 594 PDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESA 653
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
+HF+ +L+ LF + + +SDTHDK+KC RCV +Q+KPPP ++DCT LS W+H +
Sbjct: 654 EKHFTRDDLKDLFSFDPDILSDTHDKLKCKRCVQNVQMKPPPDDTDCTSHLSQWYHCSNN 713
Query: 713 RWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
R L D IL W VSFVF+ H ++++K + E E
Sbjct: 714 RGLPDNILAQAWTDSKCVSFVFH-HRSQSQKIETTPATETSVE 755
>sp|B4GS98|RAD54_DROPE DNA repair and recombination protein RAD54-like OS=Drosophila
persimilis GN=okr PE=3 SV=1
Length = 782
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/763 (54%), Positives = 540/763 (70%), Gaps = 19/763 (2%)
Query: 1 RRSLAPSQLSKRSPEDSPGIKTFPPPV-KKEKRSCTS---RKPLGSVDNEDEPNSK---L 53
RRSLAPSQ R + F PP+ KK KR+C ++ L D N+ L
Sbjct: 2 RRSLAPSQ---RGGQRLSSRNDFTPPLLKKNKRACQQDLEQERLRQSALRDATNTSDLPL 58
Query: 54 PMTKEEMSEHENLIRQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALV 113
P+ +E+E I ++LA+ FKVPI NY + LGVRR R+ LHDP A NALV
Sbjct: 59 PIRFTANTEYEMAIAKVLARKFKVPIDNYVPDYGGNRTLGVRRRIVRRPLHDPLACNALV 118
Query: 114 LYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGC 173
LY P + H+ + ++ + VHVVVDP+LSNILRPHQREGV+FMYECV G R + GC
Sbjct: 119 LYHAPNYTDHERMSMEPSSVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGC 177
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVA 233
IMADEMGLGKTLQC+ L+WTLL+Q KP I+K IIV+PSSLVKNW E TKWL GR+
Sbjct: 178 IMADEMGLGKTLQCVALVWTLLKQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMH 237
Query: 234 ALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGH 293
L ++GGSK L F R P+L+ISYETFR +A +L K EVG+V+CDEGH
Sbjct: 238 CLAMEGGSKENTVRALEQFSMNASTRLGTPVLLISYETFRIYAEILCKYEVGMVICDEGH 297
Query: 294 RLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYET 353
RLKN ++ TYQALMGLK KRRVLLSGTPIQNDL EYFSLV+FVN +LGTA +F++ +E
Sbjct: 298 RLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFEN 357
Query: 354 PILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDL 413
ILRGQ++ ++D ER +A E+ ++LI +V++C+IRRT+ +L+KYLPVK E V+C K+T +
Sbjct: 358 CILRGQNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPI 417
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFEN 473
Q +LYTN +KSD VRR++ + K +TAL+ IT+LKKLC+HP+L+ +KI G GFEN
Sbjct: 418 QLQLYTNFLKSDQVRRSLADCKE-KASLTALADITTLKKLCSHPNLICEKIAAGEKGFEN 476
Query: 474 AMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL 533
+ NILP Y G++ ELS K +LD MLA I+ +DK+VL+SNYTQTLDLFE L
Sbjct: 477 SQNILPINYNPK---GEINPELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFELL 533
Query: 534 SKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFD 592
++ R Y +VRLDG+M+IKKR+KVV+ FN S+ F+FMLSSKAGGCGLNLIGANRL MFD
Sbjct: 534 ARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFD 593
Query: 593 PDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDV 652
PDWNPAND+QAMARVWRDGQKKPC++YR +++GSIEEK++QRQ HKK+LSS ++D E
Sbjct: 594 PDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESA 653
Query: 653 ARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQVKPPPLESDCTDDLSCWHHVTEK 712
+HF+ +L+ LF + + +SDTHDK+KC RCV +Q+ PPP ++DCT LS W+H +
Sbjct: 654 EKHFTRDDLKDLFSFDPDILSDTHDKLKCKRCVQNVQMMPPPDDTDCTSHLSQWYHCSNN 713
Query: 713 RWLVDPILKHCWGAG--VSFVFYQHSTKAEKSKVVTEEEEKEE 753
R L D IL W VSFVF+ H ++++K + E E
Sbjct: 714 RGLPDNILAQAWTDSKCVSFVFH-HRSQSQKIEATPATETSVE 755
>sp|P41410|RAD54_SCHPO DNA repair protein rhp54 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp54 PE=1 SV=2
Length = 852
Score = 637 bits (1643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/604 (53%), Positives = 419/604 (69%), Gaps = 24/604 (3%)
Query: 118 PQLSAHDLLKIDKDKIQ---VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCI 174
P S DLL I K+K V VV+DP L+ ILRPHQ EGVKF+Y+CVTG A GCI
Sbjct: 232 PNKSLKDLLGIQKEKPPPPPVAVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANGCI 291
Query: 175 MADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLG-GRV 232
MADEMGLGKTLQCI L+WTLL+Q P A KP I+KAII PSSLVKNW NE+ KWLG +
Sbjct: 292 MADEMGLGKTLQCIALLWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAI 351
Query: 233 AALPIDG-GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDE 291
+DG SK E+ L + +GR+ P+L+ SYET RS+ L+ E+G++LCDE
Sbjct: 352 TPFILDGKSSKQELIMALQQWASVHGRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDE 411
Query: 292 GHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQY 351
GHRLKN +S T+ AL L +RRV+LSGTPIQNDL EYFSL++F N G+LG+ QEFRK Y
Sbjct: 412 GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471
Query: 352 ETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMT 411
E PIL+G+D+ ++ ++ + +L +L IVNR +IRRT+ +LSKYLPVK E VV ++
Sbjct: 472 EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGF 471
+ Q LY + I S + + ++G G L +I LKK+CNHPDL+ +
Sbjct: 532 EFQLSLYKHFITSPEINKILRG-----TGSQPLKAIGLLKKICNHPDLL-----NLTEDL 581
Query: 472 ENAMNILPTGYAASYKSGK---LLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLD 528
E + P G+ G+ + LS K++VL+ ML IK TDDKIVL+SNYT TLD
Sbjct: 582 EGCEALFPPGFIPRELRGRDRNIDSSLSGKMLVLERMLYQIKQETDDKIVLISNYTSTLD 641
Query: 529 LFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNE-FIFMLSSKAGGCGLNLIGANR 587
LFE+L + RGYK +RLDG+M + KR ++V+TFN + F+F+LSSKAGGCG+NLIGANR
Sbjct: 642 LFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINLIGANR 701
Query: 588 LVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVD 647
L++FDPDWNPA D QA+ARVWRDGQKK CFVYRF++TG+IEEK+ QRQ+HK++LSSCVVD
Sbjct: 702 LILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVD 761
Query: 648 CEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRCVNGIQ-VKPPPLESDCTDDLSCW 706
+DV RHFS+ LR LFQL ++T+ +TH+ KC RC +G Q ++ P + D S W
Sbjct: 762 EAQDVERHFSLDNLRQLFQLNDHTVCETHETYKCKRCRDGKQFIRAPAM---LYGDTSTW 818
Query: 707 HHVT 710
+H T
Sbjct: 819 NHFT 822
>sp|P32863|RAD54_YEAST DNA repair and recombination protein RAD54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD54 PE=1
SV=1
Length = 898
Score = 585 bits (1507), Expect = e-166, Method: Compositional matrix adjust.
Identities = 312/621 (50%), Positives = 398/621 (64%), Gaps = 56/621 (9%)
Query: 135 VHVVVDPVLSNILRPHQREGVKFMYECVTGVRIED------------------------- 169
V VV+DP L+ ILRPHQ EGV+F+Y CVTG+ ++D
Sbjct: 259 VPVVIDPKLAKILRPHQVEGVRFLYRCVTGLVMKDYLEAEAFNTSSEDPLKSDEKALTES 318
Query: 170 ---------AYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNW 220
AYGCIMADEMGLGKTLQCI LMWTLLRQGP K LIDK IIV PSSLV NW
Sbjct: 319 QKTEQNNRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNW 378
Query: 221 CNEITKWLG-GRVAALPIDG------GSKAEIDNKLNSFMQTYGRRPVNPILVISYETFR 273
NE+ KWLG + L +DG G + ++++ Q GR V P+L+ISYET R
Sbjct: 379 ANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLR 438
Query: 274 SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLV 333
+ L VGL+L DEGHRLKN +S T+ AL + RRV+LSGTPIQNDL EYF+L+
Sbjct: 439 RNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALL 498
Query: 334 HFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSAL 393
F N G+LG+ EFRK +E PILRG+D+ A+D E TK +L++L IV++ +IRRT+ +
Sbjct: 499 SFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDI 558
Query: 394 LSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKL 453
L+KYLP K E V+ + + LQ ELY LIKS R +K G L +I LKKL
Sbjct: 559 LAKYLPCKYEHVIFVNLKPLQNELYNKLIKS----REVKKVVKGVGGSQPLRAIGILKKL 614
Query: 454 CNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
CNHP+L+ + + + + +P A ++ + SAK +L+ L IK
Sbjct: 615 CNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQT-----KYSAKFSILERFLHKIKT 669
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TSNEFIFM 570
+DDKIVL+SNYTQTLDL E++ + + Y VRLDG+M+I KR K+V+ FN EFIF+
Sbjct: 670 ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFL 729
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCG+NLIGANRL++ DPDWNPA D QA+ARVWRDGQKK CF+YRF+STG+IEEK
Sbjct: 730 LSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEK 789
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCSRC-VNGIQ 689
+ QRQ+ K +LSSCVVD +EDV R FS LR LFQ ENTI +TH+ C RC G Q
Sbjct: 790 IFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICETHETYHCKRCNAQGKQ 849
Query: 690 VKPPPLESDCTDDLSCWHHVT 710
+K P + D + W+H+
Sbjct: 850 LKRAP--AMLYGDATTWNHLN 868
>sp|A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp.
japonica GN=RAD54 PE=1 SV=1
Length = 980
Score = 550 bits (1416), Expect = e-155, Method: Compositional matrix adjust.
Identities = 317/744 (42%), Positives = 437/744 (58%), Gaps = 91/744 (12%)
Query: 70 ILAKPFKVPILNYTGGGYSTKALGV-RREGARKAL--HDPTAPNAL--VLYTPPQLSAHD 124
I KPFK P N GYS + RR ARK P A+ +L P +S+ D
Sbjct: 137 IARKPFKPPCQN----GYSENNEQLARRLSARKRFVPWGSVQPFAVTNILPQSPAVSSDD 192
Query: 125 LLKI-------------------DKDKIQVHVV-VDPVLSNILRPHQREGVKFMYECVTG 164
++ DK+ + VD +L LRPHQREGV+FM++CV+G
Sbjct: 193 SVENEESLPPGIEPLILWQPEGRDKENSNFSAIKVDHLLVRYLRPHQREGVQFMFDCVSG 252
Query: 165 VRIEDAY-GCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNE 223
+ +D GCI+AD+MGLGKTLQ ITL++TLL QG AKP++ +A++V P+SLV NW +E
Sbjct: 253 LLNDDGISGCILADDMGLGKTLQSITLLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESE 312
Query: 224 ITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHK-N 282
I KWL GRV L + ++A++ + + SF++ R V L++SYETFR H+S +
Sbjct: 313 IIKWLKGRVQLLALCESTRADVLSGIESFLKPLSRLQV---LIVSYETFRMHSSKFERPG 369
Query: 283 EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILG 342
L++CDE HRLKN ++ T +AL L KRR+LLSGTP+QNDL E+FS+V+F N G+LG
Sbjct: 370 SCDLLICDEAHRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLG 429
Query: 343 TAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKT 402
A FR+ YE PI+ G++ AS E+ +ER +L VN ++RRT+ALLS +LP K
Sbjct: 430 DATYFRRYYEAPIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKI 489
Query: 403 EQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMD 462
+VVC K+T LQ LY + I S V+R + G L+ IT+LKKLCNHP L+ D
Sbjct: 490 VEVVCCKLTALQTALYNHFIHSKNVKRLISEGTKQS---KVLAYITALKKLCNHPKLIYD 546
Query: 463 KIQ---TGADGFENAMNILP----TGYAASYK-SGKLLIELSAKLMVLDTMLAVIKMTTD 514
I+ +G GF++ + P +G + S+ G + +ELS K+ VL +L +++ TD
Sbjct: 547 TIKSNNSGGSGFDDCLRFFPPELFSGRSGSWTGGGGMWVELSGKMHVLARLLGHLRLKTD 606
Query: 515 DKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEFIFMLSS 573
D+IVLVSNYTQTLDLF +L + R Y Y+RLDG+ +I KR K+V FN S +EF+F+LSS
Sbjct: 607 DRIVLVSNYTQTLDLFAQLCRERRYPYIRLDGATSINKRQKLVNQFNDPSRDEFVFLLSS 666
Query: 574 KAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQ 633
KAGGCGLNL+G NRL++FDPDWNPAND QA ARVWRDGQKK ++YRFLSTG+IEEK+ Q
Sbjct: 667 KAGGCGLNLVGGNRLILFDPDWNPANDKQAAARVWRDGQKKRVYIYRFLSTGTIEEKVYQ 726
Query: 634 RQAHKKALSSCVVDCEED---VARHFSMSELRSLFQLEENTISDTHDKIKCSRC------ 684
RQ K+ L + + D S +LR LF E S+ H+ +KC+RC
Sbjct: 727 RQMSKEGLQKVIQQEQADGKMQGSSLSTEDLRDLFTFHEQIRSEIHENLKCNRCNKDGCM 786
Query: 685 -VNGIQVKPPPLESDCTD-----------------------------------DLSCWHH 708
++G + E + ++ DL W H
Sbjct: 787 VLDGSKFDSAATEHEASNSGENSYIDIGGFGAISGCVQKMNSSNQQIGSPSEEDLGSWGH 846
Query: 709 VTEKRWLVDPILKHCWGAGVSFVF 732
++ + D IL+ G VSFVF
Sbjct: 847 HSDPSTVPDTILQCSSGDEVSFVF 870
>sp|Q6PFE3|RA54B_MOUSE DNA repair and recombination protein RAD54B OS=Mus musculus
GN=Rad54b PE=2 SV=1
Length = 886
Score = 470 bits (1210), Expect = e-131, Method: Compositional matrix adjust.
Identities = 292/705 (41%), Positives = 396/705 (56%), Gaps = 59/705 (8%)
Query: 68 RQILAKPFKVPILNYTGGGYSTKALGVRREGARKALHDPTAPNALVLYTPPQLSAHDLLK 127
R+ + PFK ST+A G R R H+P PNALV+ P + H +
Sbjct: 205 RKCFSNPFKSVC-------QSTQAQGKRWNDCRPR-HNPCTPNALVMPRPDE--NHQRMF 254
Query: 128 IDKDKIQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQC 187
V VV+DP L + LRPHQ++G+ F+YECV G+R G I+ADEMGLGKTLQC
Sbjct: 255 NRHCSPIVDVVIDPHLVHHLRPHQKDGIIFLYECVMGMRAVGKCGAILADEMGLGKTLQC 314
Query: 188 ITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI 245
I+L+WTL QGP KP+I K +IV P SLV NW E KWLG R+ +D
Sbjct: 315 ISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSERIKIFTVDQ------ 368
Query: 246 DNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQA 305
D+K+ F+ + + +L+ISYE + GL++CDEGHRLKN +T A
Sbjct: 369 DHKVEEFINST----FHSVLIISYEMLLRSLDQIKTIPFGLLICDEGHRLKNSSIKTTTA 424
Query: 306 LMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASD 365
L L ++ V+L+GTP+QNDL E+F+LV FVN GILG+ +RK YE PI+ ++ +S
Sbjct: 425 LSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISREPSSSK 484
Query: 366 AERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSD 425
ER R +L + R ++RRT +++KYLP K E VV + LQ ELY L++S
Sbjct: 485 EERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYRKLLRSQ 544
Query: 426 AVRRTMKG-GENTKLGMTALSSITSLKKLCNHPDLVMDKI---QTGADGFENAMNILPTG 481
+VR ++G EN+ L I +LKKLCNHP L+ + + + EN L G
Sbjct: 545 SVRFCLQGLLENS----AHLICIGALKKLCNHPCLLFSSVKGKEFSSSCEENEERNLCQG 600
Query: 482 ----YAASYKSGKLLIELSAKLMVLDTMLAVI-KMTTDDKIVLVSNYTQTLDLFERLSKL 536
+ A Y + E S KL VL +LAVI ++ +K++LVSNY QTL++ E + K
Sbjct: 601 LLSVFPAGYNPLQFSEEESGKLQVLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCKR 660
Query: 537 RGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDW 595
GY RLDG + +R +V++FN K S +FIF+LSSKAGG GLNLIG + L+++D DW
Sbjct: 661 HGYACARLDGQTPVSQRQHIVDSFNSKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDW 720
Query: 596 NPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVAR- 654
NPA D QAM+RVWRDGQK P +YR L+TG+IEEK+ QRQ K+ LS VVD
Sbjct: 721 NPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHI 780
Query: 655 HFSMSELRSLFQLEENTISDTHDKIKCSRC--------------VNGIQVKPPPLESDCT 700
FS+ EL++LF L E++ THD + C C V Q + P +SD
Sbjct: 781 QFSVEELKNLFTLHESSHCVTHDLLDC-ECTGEKGHTEDASEGPVASRQCQFGPQKSDAL 839
Query: 701 DDLSC-----WHHVTEKRW-LVDPILKHCWGAGVSFVFYQHSTKA 739
LS W H + L DP L+ VSF F + +A
Sbjct: 840 RPLSMSQLKQWKHFSGDHLNLPDPFLERI-RENVSFFFQNITNQA 883
>sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus
GN=RAD54B PE=2 SV=1
Length = 918
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 280/678 (41%), Positives = 397/678 (58%), Gaps = 62/678 (9%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K H+P N+LV+ P ++H + V VVVDP ++N LRPHQREG+ F+YE
Sbjct: 259 KPRHNPNDTNSLVMPRPN--ASHQCMFNKAGLPVVDVVVDPYIANNLRPHQREGIVFLYE 316
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ +G I+ADEMGLGKTLQCI+L+WTLLRQG KP++ +A+IV P SLVKN
Sbjct: 317 CVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVLKRALIVTPGSLVKN 376
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+ + P+ +++ISYE
Sbjct: 377 WKKEFQKWLGSERIKVFTVDQ------DHKVEEFISS----PLYSVMIISYEMLLRSLDQ 426
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ E L++CDEGHRLKN +T AL L +RR++L+GTPIQNDL E+++L+ FVN
Sbjct: 427 IQAIEFNLLICDEGHRLKNSSIKTTTALTNLSCERRIILTGTPIQNDLQEFYALIEFVNP 486
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
G+LG+ +RK YE PI+R ++ A+ E+ +R +L + ++RRT +++K+L
Sbjct: 487 GVLGSLSTYRKIYEEPIVRSREPSATKEEKDLGEKRAAELTRLTGLFILRRTQEVINKFL 546
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG-ENTKLGMTALSSITSLKKLCNHP 457
P K E ++ + T LQ ELY L+ S + ++G EN+ L I +LKKLCNHP
Sbjct: 547 PPKKENIIFCQPTALQLELYRKLLSSRVISSCLQGRLENS----PHLICIGALKKLCNHP 602
Query: 458 DLVMDKIQ-----------TGADGFENAMNILPTGYAASYKSGKLLIEL-SAKLMVLDTM 505
L+ ++ + +E ++ P Y + S E+ S KL VL +
Sbjct: 603 CLLFKALKEKCCDPKSDEHVESSLYEGLTDVFPQDYTSDTFS-----EIDSGKLQVLVKL 657
Query: 506 LAVIK-MTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KT 563
LA I+ +++ +++VLVSNYTQTL++ K GY Y RLDG+ + +R ++V++FN K
Sbjct: 658 LAAIRELSSSERVVLVSNYTQTLNVLLETCKCYGYSYTRLDGNTPVSQRQQIVDSFNSKF 717
Query: 564 SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
S FIF+LSSKAGG GLNL+GA+ L+++D DWNPA D QAMARVWRDGQK +YR L+
Sbjct: 718 SPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVHIYRLLT 777
Query: 624 TGSIEEKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCS 682
TG+IEEK+ QRQ K+ LS VVD + HFS+ ELR+LF L EN+ THD ++C
Sbjct: 778 TGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHENSSCVTHDLLECD 837
Query: 683 RCVNGIQVKPP---PLESDCT-----------------DDLSCWHHVT-EKRWLVDPILK 721
N P P S C L W H + + + L DP L+
Sbjct: 838 CMGNKDHQNPSSKKPSVSRCCQLRQDQGKHNSKKPLSMSQLMQWKHFSGQHQALPDPFLE 897
Query: 722 HCWGAGVSFVFYQHSTKA 739
VSF+F Q+ T A
Sbjct: 898 RI-KENVSFIF-QNVTNA 913
>sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens
GN=RAD54B PE=1 SV=1
Length = 910
Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust.
Identities = 281/674 (41%), Positives = 387/674 (57%), Gaps = 53/674 (7%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDP PN+LV+ P + H + V VV+DP L LRPHQ+EG+ F+YE
Sbjct: 252 KPRHDPYTPNSLVMPRPDK--NHQWVFNKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYE 309
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA-KPLIDKAIIVAPSSLVKN 219
CV G+R+ G I+ADEMGLGKTLQCI+L+WTL QGP KP+I K +IV P SLV N
Sbjct: 310 CVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNN 369
Query: 220 WCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASV 278
W E KWLG R+ +D D+K+ F+++ +L+ISYE
Sbjct: 370 WKKEFQKWLGSERIKIFTVDQ------DHKVEEFIKSI----FYSVLIISYEMLLRSLDQ 419
Query: 279 LHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQ 338
+ + L++CDEGHRLKN +T AL+ L ++R++L+GTPIQNDL E+F+L+ FVN
Sbjct: 420 IKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNP 479
Query: 339 GILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYL 398
GILG+ +RK YE PI+ ++ AS+ E+ R +L + ++RRT +++KYL
Sbjct: 480 GILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYL 539
Query: 399 PVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKG-GENTKLGMTALSSITSLKKLCNHP 457
P K E VV + LQ ELY L+ S VR ++G EN+ L I +LKKLCNHP
Sbjct: 540 PPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS----PHLICIGALKKLCNHP 595
Query: 458 DLVMDKI---QTGADGFENAMNILPTG----YAASYKSGKLLIELSAKLMVLDTMLAVI- 509
L+ + I + + +N L G + A Y + S KL VL +LAVI
Sbjct: 596 CLLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIH 655
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFN-KTSNEFI 568
++ +K+VLVSNYTQTL++ + + K GY Y RLDG I +R ++V+ FN + S+ FI
Sbjct: 656 ELRPTEKVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFI 715
Query: 569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIE 628
F+LSSKAGG GLNLIG + L+++D DWNPA D QAM+RVWRDGQK P +YR L+TG+IE
Sbjct: 716 FLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIE 775
Query: 629 EKMMQRQAHKKALSSCVVDCEEDVAR-HFSMSELRSLFQLEENTISDTHDKIKCSRCVN- 686
EK+ QRQ K+ L VVD + FS+ EL++LF L E++ THD + C C
Sbjct: 776 EKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDC-ECTGE 834
Query: 687 ---------------GIQVKPPPLESDCTDDLSC-----WHHVTEKRW-LVDPILKHCWG 725
Q+ P +S+ LS W H + L DP L+
Sbjct: 835 EVHTGDSLEKFIVSRDCQLGPHHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI-T 893
Query: 726 AGVSFVFYQHSTKA 739
VSF+F +T+A
Sbjct: 894 ENVSFIFQNITTQA 907
>sp|B5VE38|RDH54_YEAS6 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=RDH54 PE=3 SV=1
Length = 924
Score = 408 bits (1048), Expect = e-113, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 348/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRIYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLRVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>sp|P38086|RDH54_YEAST DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RDH54 PE=1
SV=4
Length = 958
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 283 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 342
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 343 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 402
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 403 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 459
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 460 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 519
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 520 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 579
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 580 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 629
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 630 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 678
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 679 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 738
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 739 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 798
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 799 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 854
>sp|A6ZL17|RDH54_YEAS7 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain YJM789) GN=RDH54 PE=3 SV=1
Length = 924
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLRVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>sp|B3LN76|RDH54_YEAS1 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=RDH54 PE=3 SV=1
Length = 924
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGRLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLRVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>sp|C7GQI8|RDH54_YEAS2 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain JAY291) GN=RDH54 PE=3 SV=1
Length = 924
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 239/597 (40%), Positives = 347/597 (58%), Gaps = 73/597 (12%)
Query: 134 QVHVVVDPVLSNILRPHQREGVKFMYECVTGV---RIE-----------------DAYGC 173
+V V+VDP+L LRPHQREGVKFMY+C+ G+ IE D GC
Sbjct: 249 EVDVIVDPLLGKFLRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGC 308
Query: 174 IMADEMGLGKTLQCITLMWTLLRQGPLAKP------------LIDKAIIVAPSSLVKNWC 221
++AD+MGLGKTL ITL+WTL+RQ P A L K ++V P +L+ NW
Sbjct: 309 LLADDMGLGKTLMSITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWK 368
Query: 222 NEITKWLG-GRVAALPIDGGSKAEIDN-KLNSFMQTYGRRPVNPILVISYETFRSHASVL 279
E KWL R+ L + + ++D + +F++ + +L+I YE S + L
Sbjct: 369 REFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKV---QRTYQVLIIGYEKLLSVSEEL 425
Query: 280 HKNE--VGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVN 337
KN+ + +++CDEGHRLKN S+ L L +R++LL+GTPIQNDL E+F+++ F+N
Sbjct: 426 EKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFIN 485
Query: 338 QGILGTAQEFRKQYETPILRGQDSCASDAER--TKANERLEQLIGIVNRCLIRRTSALLS 395
GILG+ F++++ PI R +D+ E K ER +++I I R ++RRT+A+L
Sbjct: 486 PGILGSFASFKRRFIIPITRARDTANRYNEELLKKGEERSKEMIEITKRFILRRTNAILE 545
Query: 396 KYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSS----ITSLK 451
KYLP KT+ ++ K Q + ++++ G G SS IT LK
Sbjct: 546 KYLPPKTDIILFCKPYSQQILAFKDILQ----------GARLDFGQLTFSSSLGLITLLK 595
Query: 452 KLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKM 511
K+CN P LV G+D + + +I T SY S KL VL T+L I+
Sbjct: 596 KVCNSPGLV------GSDPYYKS-HIKDTQSQDSYSRSLN----SGKLKVLMTLLEGIRK 644
Query: 512 TTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFML 571
T +K+V+VSNYTQTLD+ E L + G + RLDGS+ K+R +V +FN+ F F+L
Sbjct: 645 GTKEKVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLL 704
Query: 572 SSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKM 631
S+K+GG GLNL+GA+RL++FD DWNP+ D QAM+R+ RDGQKKPCF+YR ++TG I+EK+
Sbjct: 705 SAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKI 764
Query: 632 MQRQAHKKALS------SCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKCS 682
+QRQ K +LS S + + E F+ +L+ LF + +T S+THD I CS
Sbjct: 765 LQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSVHTDTKSNTHDLI-CS 820
>sp|Q09772|RDH54_SCHPO Meiotic recombination protein rdh54 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rdh54 PE=1 SV=3
Length = 811
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 218/606 (35%), Positives = 334/606 (55%), Gaps = 52/606 (8%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K HDPT ALV+ P K + V VV+DP LS L HQREGV F+Y+
Sbjct: 168 KPRHDPTVLGALVMSRP---------KTWDPRTHVDVVIDPFLSKHLYSHQREGVSFLYD 218
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK--PLIDKAIIVAPSSLVK 218
C+ G+ + Y I+ADEMGLGKTLQ IT++WTLL+Q A I+ A++VAP +L+K
Sbjct: 219 CLLGMEGKCGYSAILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLK 278
Query: 219 NWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVISYET----FRS 274
NW NE WLG + I ++ Q + I++ YET R+
Sbjct: 279 NWENEFYNWLGHERIHVYIARCAED---------FQEFTSNKTYSIIITGYETVCTYLRN 329
Query: 275 HASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVH 334
+ + ++ L++CDE HRLK+ SQT+ L LK ++R+LL+GTP+QNDL EYFS+V+
Sbjct: 330 YGCGI---DIDLLICDEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVN 386
Query: 335 FVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALL 394
F+ G LGT F+ QYE PILR + AS + + RL++L + +RR + +L
Sbjct: 387 FIIPGSLGTPNSFKAQYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANIL 446
Query: 395 SKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLC 454
+K+LP +T+ V+ IK T Q+ +Y +++ KG L +T L K+C
Sbjct: 447 AKHLPPRTDIVLFIKPTHQQENVYGHVLDGFKSSVDQKG--------YYLKILTRLSKIC 498
Query: 455 NHPDLVMDKIQTGADGFENAMNILPTGYAAS--YKSGKLLIELSAKLMVLDTMLAVIKMT 512
N L+ ++ + N L T ++ +L+ S+KL +L +L +
Sbjct: 499 NSTILLRNEKE----------NFLSTELQDKHVFEQENMLLS-SSKLQILAALLKSFQRG 547
Query: 513 TDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS-NEF-IFM 570
K V+VS Y +TL+L E + ++ +L GS +R +V FN +S EF + +
Sbjct: 548 C-QKAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLL 606
Query: 571 LSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEK 630
LSSKAGGCGLNL G+ RL++++P WNPA D QA++R++R GQK+P +Y FLS+G ++E+
Sbjct: 607 LSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDER 666
Query: 631 MMQRQAHKKALSSCVVDCEEDVARHFSMSE-LRSLFQLEENTISDTHDKIKCSRCVNGIQ 689
+ RQ K+ LSS +D + ++F E +++LF + T++ S ++ +
Sbjct: 667 IFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSYSKTETCLTYELAFDSDEIDSLT 726
Query: 690 VKPPPL 695
K PL
Sbjct: 727 KKKDPL 732
>sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4
Length = 1467
Score = 273 bits (699), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 201/680 (29%), Positives = 317/680 (46%), Gaps = 152/680 (22%)
Query: 125 LLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY----ECVTGVRIEDAYGCIMADEMG 180
L+ ++ + +V + P L+ ++PHQ G++F+Y E + + +GCI+A MG
Sbjct: 249 LVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMG 308
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQ I+ + L R P + + P + ++NW E WL ALP D
Sbjct: 309 LGKTLQVISFIDVLFRHTP-----AKTVLAIVPVNTLQNWLAEFNMWLPP-PEALPADNK 362
Query: 241 S--------KAEIDNKLNSFMQTYGRRPVN-----PILVISYETFR-------------- 273
K I N + M + + + +L++ YE +R
Sbjct: 363 PEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGRPK 422
Query: 274 -----SHASVLHKNE-------------------VGLVLCDEGHRLKNCESQTYQALMGL 309
SH ++ +E +V+CDEGHR+KNC++ T QAL +
Sbjct: 423 KTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNI 482
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQ--DSCASDAE 367
+++RRV+L+G P+QN+L+EY+ +V FV LGT QEF +E PIL GQ DS D
Sbjct: 483 RSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVR 542
Query: 368 RTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAV 427
+ R L ++ + RR +L +LP K E V+ ++++ +Q++LYT +
Sbjct: 543 LMRY--RSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMD---- 596
Query: 428 RRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQT--------------------- 466
R G + LG+ L + K+ NHPD++ + +Q
Sbjct: 597 -RFRDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSA 655
Query: 467 ----------GAD-------------------GF----ENAMNILPTGYA----ASYKSG 489
G D GF E NI+ +A +Y++G
Sbjct: 656 RCPPQGTKGKGEDSTLASSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQTG 715
Query: 490 KLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSK------------- 535
++E S K MVL L + DKI++ S TL L E L K
Sbjct: 716 --VLENSPK-MVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQG 772
Query: 536 ----LRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAGGCGLNLIGANRLV 589
+R Y RLDGS +R +++ FN SN ++F+LS++AG G+NLIGANR+V
Sbjct: 773 AQKWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVV 832
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+FD WNP +D QA+ RV+R GQKKPC++YR ++ ++E+K+ RQ K+ +S VVD +
Sbjct: 833 VFDASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVD-D 891
Query: 650 EDVARHFSMSELRSLFQLEE 669
+ +F+ E+ +L E
Sbjct: 892 LNPMLNFTRKEVENLLHFVE 911
>sp|Q99NG0|ARIP4_MOUSE Helicase ARIP4 OS=Mus musculus GN=Rad54l2 PE=1 SV=1
Length = 1466
Score = 273 bits (698), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 205/691 (29%), Positives = 321/691 (46%), Gaps = 159/691 (23%)
Query: 120 LSAHD-----LLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY----ECVTGVRIEDA 170
L+ HD L+ ++ + +V + P L+ ++PHQ G++F+Y E + +
Sbjct: 238 LNQHDALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSG 297
Query: 171 YGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG 230
+GCI+A MGLGKTLQ I+ + L R P + + P + ++NW E WL
Sbjct: 298 FGCILAHSMGLGKTLQVISFIDVLFRHTP-----AKTVLAIVPVNTLQNWLAEFNMWLPA 352
Query: 231 RVAALPIDGGSKAEIDNK------LNSFMQTYGRRPV--------NPILVISYETFR--- 273
ALP D + E+ + LN +T R +L++ YE +R
Sbjct: 353 -PEALPADSKPE-EVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLT 410
Query: 274 ----------------SHASVLHKNE-------------------VGLVLCDEGHRLKNC 298
SH ++ +E +V+CDEGHR+KNC
Sbjct: 411 LKKSLATSRPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNC 470
Query: 299 ESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRG 358
++ T QAL ++++RRV+L+G P+QN+L+EY+ +V FV LGT QEF +E PIL G
Sbjct: 471 QASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNG 530
Query: 359 Q--DSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKE 416
Q DS D + R L ++ + RR +L +LP K E V+ ++++ +Q++
Sbjct: 531 QCIDSTPQDVRLMRY--RSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRD 588
Query: 417 LYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQ----------- 465
LYT + R G + LG+ L + K+ NHPD++ + +Q
Sbjct: 589 LYTQFMD-----RFRDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLD 643
Query: 466 --------------------TGAD-------------------GF----ENAMNILPTGY 482
G D GF E NI+ +
Sbjct: 644 VEELGSAGTSARCPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEW 703
Query: 483 A----ASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFER-LSK-- 535
A +Y++G ++E S K MVL L + DKI++ S TL L E L K
Sbjct: 704 AKELLTNYQTG--VLENSPK-MVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRD 760
Query: 536 ---------------LRGYKYVRLDGSMTIKKRAKVVETFNKTSN--EFIFMLSSKAGGC 578
+R Y RLDGS +R +++ FN SN ++F+LS++AG
Sbjct: 761 MPCLPGAEGQGTQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCL 820
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NLIGANR+V+FD WNP +D QA+ RV+R GQKKPC +YR ++ ++E+K+ RQ K
Sbjct: 821 GVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISK 880
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
+ +S VVD + + +F+ E+ +L E
Sbjct: 881 QGMSDRVVD-DLNPMLNFTRKEVENLLHFVE 910
>sp|Q9UR24|RHP26_SCHPO DNA repair protein rhp26 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp26 PE=4 SV=1
Length = 973
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 183/564 (32%), Positives = 284/564 (50%), Gaps = 69/564 (12%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAY----GCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+RPH F Y+ + + Y G I+ DEMGLGKT+Q ++ + +L G K
Sbjct: 273 IRPHL-----FRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQK 327
Query: 203 PLIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDG---------------GSKAEID 246
P A+IV P++L+K W NE T W RV L G S++E +
Sbjct: 328 P----ALIVCPATLMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAE 383
Query: 247 N-----KLNSFMQTYGRRPVN---------PILVISYETFRSHASVLHKNEVGLVLCDEG 292
KL ++ R N IL+ +Y R + ++ E G + DEG
Sbjct: 384 ESKTSIKLRGASSSFHRYAKNLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEG 443
Query: 293 HRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYE 352
H+++N +S+ + ++ R++LSGTPIQN+L E ++L FV G LGT F+ Q+
Sbjct: 444 HKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFA 503
Query: 353 TPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTD 412
PI G + AS+ + A + L +++ L+RR ++ LP K+EQV+ K+T
Sbjct: 504 LPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTP 563
Query: 413 LQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFE 472
LQ++ Y + ++ +++ + G G I L+K+CNHPDLV + + +
Sbjct: 564 LQRKAYQDFLQGSDMQKILNGKRQMLYG------IDILRKICNHPDLVTREYLLHKEDY- 616
Query: 473 NAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFE- 531
Y KSGKL V+ +L + K + +L S Q LD+ E
Sbjct: 617 --------NYGDPEKSGKL--------KVIRALLTLWK-KQGHRTLLFSQTRQMLDILEI 659
Query: 532 RLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLVMF 591
L L Y R+DGS +I R +V+ FNK +F+L+++ GG G+NL GA+R+++F
Sbjct: 660 GLKDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFDVFLLTTRVGGLGVNLTGADRVILF 719
Query: 592 DPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEED 651
DPDWNP+ D QA R WR GQKK VYR ++ G+IEEK+ RQ K+ L++ ++ +
Sbjct: 720 DPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKILK-DPK 778
Query: 652 VARHFSMSELRSLFQLEENTISDT 675
R F M++L LF L +N T
Sbjct: 779 QRRFFKMTDLHDLFTLGDNKTEGT 802
>sp|A2BGR3|ERC6L_DANRE DNA excision repair protein ERCC-6-like OS=Danio rerio GN=ercc6l
PE=1 SV=1
Length = 1451
Score = 271 bits (693), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 178/589 (30%), Positives = 298/589 (50%), Gaps = 80/589 (13%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L + L HQ+EGV F+Y R G I+AD+MGLGKT+Q I+ + G
Sbjct: 101 LYDKLYDHQKEGVAFLYSLYRDGR----KGGILADDMGLGKTIQVISFL-----SGMYDA 151
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L + ++V P+SL+KNW E KW G RV G SK E + L + G
Sbjct: 152 ELANHTLLVMPTSLIKNWVREFAKWTPGMRVKEF--HGSSKTERNRNLERIQRKGG---- 205
Query: 262 NPILVISYETFRSHASVLHKN-----EVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ L N + V+ DE H++K ++T ++ + AK RVL
Sbjct: 206 --VIITTYQMLINNYEQLGSNGHREFKWDYVILDEAHKIKTSSTKTAKSAHAIPAKNRVL 263
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTP+QN+L E ++L F QG +LGT++ F+ +YE PI R ++ A+ E+
Sbjct: 264 LTGTPVQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALGLRIS 323
Query: 376 EQLIGIVNRCLIRRTSALLSK-----------------------------YLPVKTEQVV 406
+ L I+ +RRT A + + L K + +V
Sbjct: 324 QNLTDIIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKNDLIV 383
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK--I 464
++ +Q+++Y I D ++ + + L+ +T LKKLC+HP L+ + I
Sbjct: 384 WTYLSSVQEDIYNKFISLDQIKELLT------TTRSPLAELTVLKKLCDHPRLLSQRAVI 437
Query: 465 QTG-----------ADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTT 513
Q G +D E+A++ + S LIE S KL + +++ ++
Sbjct: 438 QLGLERGSDSELVHSDESESAVSQIDN------ISDHTLIEESGKLQFVVSLMECLR-EE 490
Query: 514 DDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLS 572
+ ++ S + LD+ ER+ + R ++ +RLDG++T + +R K + F IF+L+
Sbjct: 491 GHRTLIFSQSRKMLDIMERVLRNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYTIFLLT 550
Query: 573 SKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMM 632
++ GG G+ L GANR+V+FDP WNPA D QA+ R +R GQ + +YR ++ G++EEK+
Sbjct: 551 TQVGGVGITLTGANRVVIFDPSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIY 610
Query: 633 QRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+RQ K +L +++ R+FS ELR LF+LE+ S T +++
Sbjct: 611 RRQVFKDSLIRQTTGDKKNPFRYFSKQELRELFKLEDTRSSSTQQQLQA 659
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1
Length = 1493
Score = 268 bits (684), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 274/527 (51%), Gaps = 38/527 (7%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTL------LRQGPLAKP 203
+Q+ GV++++E + + A G I+ DEMGLGKT+Q I + L R
Sbjct: 510 YQQTGVRWLWE----LHCQQA-GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFE 564
Query: 204 LIDKAIIVAPSSLVKNWCNEI-TKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVN 262
+ +IV P++++ W E T W RVA L G + + + +G
Sbjct: 565 GLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTHKKEKLIRDVAHCHG----- 619
Query: 263 PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPI 322
IL+ SY R + + + V+ DEGH+++N + A + R++LSG+P+
Sbjct: 620 -ILITSYSYIRLMQDDISRYDWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPM 678
Query: 323 QNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIV 382
QN+L E +SL F+ G LGT F +Q+ PI G S AS + A + L +
Sbjct: 679 QNNLRELWSLFDFIFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTI 738
Query: 383 NRCLIRR--TSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
N L+RR + +S LP K EQV+ ++TD Q ++Y N + S V R + G
Sbjct: 739 NPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHKVYQNFVDSKEVYRILNGE------ 792
Query: 441 MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
M S + +L+K+CNHPDL G + LP + G + S K++
Sbjct: 793 MQIFSGLIALRKICNHPDLF--------SGGPKNLKGLPDDELEEDQFG--YWKRSGKMI 842
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
V++++L I +++L S Q LD+ E + + Y Y+++DG+ TI R ++ +
Sbjct: 843 VVESLLK-IWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRY 901
Query: 561 NKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYR 620
N+ ++ F+F+L+++ GG G+NL GANR+V++DPDWNP+ D QA R WR GQKK VYR
Sbjct: 902 NEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYR 961
Query: 621 FLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFSMSELRSLFQL 667
L+ G+IEEK+ RQ K+ L++ V+ + R F ++L LF L
Sbjct: 962 LLTAGTIEEKIYHRQIFKQFLTNRVLK-DPKQRRFFKSNDLYELFTL 1007
>sp|A4IHD2|ARIP4_XENTR Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE=2 SV=1
Length = 1396
Score = 265 bits (677), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 192/672 (28%), Positives = 310/672 (46%), Gaps = 139/672 (20%)
Query: 125 LLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMY----ECVTGVRIEDAYGCIMADEMG 180
L+ I+ + + + P L+ ++ HQ G++F+Y E + +GCI+A MG
Sbjct: 247 LVNINHPPNEKDIFLAPQLARAVKSHQIGGIRFLYDNLVESLERFSGSSGFGCILAHSMG 306
Query: 181 LGKTLQCITLMWTLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGG 240
LGKTLQ I+ + +L Q AK + + P + ++NW E WL +LP D
Sbjct: 307 LGKTLQVISFL-DVLFQHTSAK----TVLAIVPVNTLQNWLAEFNMWLPP-PESLPKDHN 360
Query: 241 S-----KAEIDNKLNSFMQTYGRRP--VNP------ILVISYETFR-------------- 273
+A + +N +T R VN +L++ YE +R
Sbjct: 361 QELVQPRAFKVHTMNDEHKTTAARAKVVNDWATDGGVLLMGYEMYRLLSLKKSFTAGRKK 420
Query: 274 ------------------------SHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGL 309
L + +V+CDEGHR+KNC + T QAL +
Sbjct: 421 KSKKAAGPVIIDLDEEDRQQEMLKGIEKALSRPGPDVVICDEGHRIKNCHASTSQALKNI 480
Query: 310 KAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERT 369
+++RRV+L+G P+QN+L+EY+ +V FV LGT QEF +E PIL GQ ++ ++
Sbjct: 481 RSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDKR 540
Query: 370 KANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRR 429
R L ++ + RR +L LP K E V+ ++++ +Q++LYT + R
Sbjct: 541 LMRYRSHVLHSLLEGFVQRRGHTVLKAQLPFKEEHVILVRLSKIQRDLYTEFMN-----R 595
Query: 430 TMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNI--LPTGYAASYK 487
G + LG+ L + K+ NHPD++ + +Q E +++ L T + +
Sbjct: 596 FRDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEDLGTNNRCNAQ 655
Query: 488 SGKLLIE---LSAKL--------------------------------------------- 499
SGK+ +E L A +
Sbjct: 656 SGKIKVEPNSLGALMGETAHTKQLQGIVLNPSHEKANQVVTYEWAKEILSDYIPGQLQNS 715
Query: 500 --MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERL------------------SKLRGY 539
MVL L M DKI++ S TL + E + +R
Sbjct: 716 PKMVLLFHLIEESMRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNV 775
Query: 540 KYVRLDGSMTIKKRAKVVETFNKTSNE--FIFMLSSKAGGCGLNLIGANRLVMFDPDWNP 597
Y RLDGS + +R +++ FN SNE ++F+LS++AG G+NLIGANR+V+FD WNP
Sbjct: 776 NYYRLDGSTSASERERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNP 835
Query: 598 ANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCEEDVARHFS 657
+D QA+ RV+R GQ+KPC++YR +S ++E+K+ RQ K+ +S VVD + + +F+
Sbjct: 836 CHDAQAVCRVYRYGQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVD-DLNPEVNFT 894
Query: 658 MSELRSLFQLEE 669
E+ +L E
Sbjct: 895 RREVENLLHFVE 906
>sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L
PE=1 SV=1
Length = 1250
Score = 259 bits (662), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 175/575 (30%), Positives = 283/575 (49%), Gaps = 82/575 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLFEHQKEGIAFLYSLYRDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P++L+ W E KW G RV G SK E LN Q G
Sbjct: 143 SLVNHVLLIMPTNLINTWVKEFIKWTPGMRVKTF--HGPSKDERTRNLNRIQQRNG---- 196
Query: 262 NPILVISYE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+++ +Y+ +FR V V+ DE H++K +++ + A
Sbjct: 197 --VIITTYQMLINNWQQLSSFRGQEFVW-----DYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTK 370
R+LL+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 371 ANERLEQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVV 406
+ E L+ I+ +RRT + K L K + ++
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 407 CIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKI-- 464
I++ LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ +
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACC 423
Query: 465 ---------QTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDD 515
Q G +G ++ P + L+E S K++ L +L ++
Sbjct: 424 LLNLGTFSAQDGNEGEDS-----PDVDHIDQVTDDTLMEESGKMIFLMDLLKRLRDEGHQ 478
Query: 516 KIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSK 574
+V S Q L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++
Sbjct: 479 TLVF-SQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKDYSVFLLTTQ 537
Query: 575 AGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQR 634
GG GL L A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +R
Sbjct: 538 VGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRR 597
Query: 635 QAHKKALSSCVVDCEEDVARHFSMSELRSLFQLEE 669
Q K +L +++ R+FS ELR LF +E+
Sbjct: 598 QVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIED 632
>sp|Q8BHK9|ERC6L_MOUSE DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l
PE=1 SV=1
Length = 1240
Score = 258 bits (660), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 172/577 (29%), Positives = 291/577 (50%), Gaps = 74/577 (12%)
Query: 150 HQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
HQ+EG+ F+Y R G I+AD+MGLGKT+Q I + G L++ +
Sbjct: 100 HQKEGIAFLYSLYKDGR----KGGILADDMGLGKTVQIIAFL-----SGMFDASLVNHVL 150
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPILVIS 268
++ P++L+ W NE KW G RV G SK+E L Q G +++ +
Sbjct: 151 LIMPTNLINTWVNEFAKWTPGMRVKTF--HGSSKSERTRSLTRIQQRNG------VVITT 202
Query: 269 YE----------TFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLS 318
Y+ +F A V V+ DE H++K+ +++ + A R+LL+
Sbjct: 203 YQMLLNNWQQLASFNGQAFVW-----DYVILDEAHKIKSASTKSAVCARAIPASNRLLLT 257
Query: 319 GTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQ 377
GTP+QN+L E +SL F QG +LGT + F+ +YE PI+R ++ A+ E+ + E
Sbjct: 258 GTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALGLKISEN 317
Query: 378 LIGIVNRCLIRRT------------SALLSKYLPV------------KTEQVVCIKMTDL 413
L+ I+ +RRT A L + P K + +V I++ L
Sbjct: 318 LMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVWIRLLPL 377
Query: 414 QKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTGAD 469
Q+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 378 QEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACRLLNLGTA 431
Query: 470 GF----ENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQ 525
F EN + + + K LI+ S K++ L ++L ++ +V S +
Sbjct: 432 TFSAQDENEQEDVSNMNSIDHLPDKTLIQESGKMIFLMSLLERLQDEGHQTLVF-SQSIK 490
Query: 526 TLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIG 584
L++ ERL K + +K +R+DG++T + +R K ++ F + +F+L+++ GG GL L
Sbjct: 491 ILNIIERLLKNKHFKTLRIDGTVTHLWEREKRIQLFQQNKEYSVFLLTTQVGGVGLTLTA 550
Query: 585 ANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSC 644
A R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +L
Sbjct: 551 ATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQ 610
Query: 645 VVDCEEDVARHFSMSELRSLFQLEENTISDTHDKIKC 681
+++ R+F+ EL+ LF + + S T +++C
Sbjct: 611 TTGEKKNPFRYFTKQELKELFTVGDLQKSATQMQLQC 647
>sp|A6QQR4|ERC6L_BOVIN DNA excision repair protein ERCC-6-like OS=Bos taurus GN=ERCC6L
PE=2 SV=1
Length = 1242
Score = 257 bits (657), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 287/569 (50%), Gaps = 68/569 (11%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L N L +Q+EG+ F+Y R G I+AD+MGLGKT+Q I + G
Sbjct: 92 LHNQLYEYQKEGIAFLYSLYRDGR----RGGILADDMGLGKTVQIIAFL-----SGMFDA 142
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
L++ +++ P+SL+ W E KW G RV G SK E L Q G
Sbjct: 143 SLVNHVLLIMPTSLISTWLREFVKWTPGMRVKTF--HGPSKDERTRNLCRIQQRNG---- 196
Query: 262 NPILVISYETFRSH---ASVLHKNEV--GLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+++ +Y+ ++ S L+ E V+ DE H++K+ +++ + A R+L
Sbjct: 197 --VIITTYQMLINNWQQLSSLNGQEFLWDYVILDEAHKIKSSSTKSAICARAIPASNRIL 254
Query: 317 LSGTPIQNDLLEYFSLVHFVNQG-ILGTAQEFRKQYETPILRGQDSCASDAERTKANERL 375
L+GTPIQN+L E +SL F QG +LGT + F+ +YE PI R ++ A+ E+ +
Sbjct: 255 LTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALGFKIS 314
Query: 376 EQLIGIVNRCLIRRTSALLSK------------------------YLPVKTEQVVCIKMT 411
E L+ I+ +RRT + K L K + ++ I++
Sbjct: 315 ENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIWIRLV 374
Query: 412 DLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDK----IQTG 467
LQ+E+Y + D ++ + + L+ + LKKLC+HP L+ + + G
Sbjct: 375 PLQEEIYRKFVSLDHIKELLMETR------SPLAELGVLKKLCDHPRLLSARACGLLNLG 428
Query: 468 ADGFENAMNILPTGYAAS------YKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVS 521
A F I G +S S L+E S K++ L +L ++ +V S
Sbjct: 429 AAKFSVQDEI--EGEDSSDVDHIDQISDDTLMEESGKMLFLMDLLKKLRDEGHQTLVF-S 485
Query: 522 NYTQTLDLFERLSKLRGYKYVRLDGSMT-IKKRAKVVETFNKTSNEFIFMLSSKAGGCGL 580
+ L++ ERL K R +K +R+DG++T + +R K + F + + +F+L+++ GG GL
Sbjct: 486 QSRRILNIIERLLKNRHFKILRIDGTITHLVEREKRISLFQQNKDYSVFLLTTQVGGVGL 545
Query: 581 NLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKA 640
L A+R+V+FDP WNPA D QA+ RV+R GQK+ VYR ++ G++EEK+ +RQ K +
Sbjct: 546 TLTAASRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDS 605
Query: 641 LSSCVVDCEEDVARHFSMSELRSLFQLEE 669
L +++ R+FS ELR LF +E+
Sbjct: 606 LIRQTTGDKKNPFRYFSKQELRELFTIED 634
>sp|P40352|RAD26_YEAST DNA repair and recombination protein RAD26 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1
SV=1
Length = 1085
Score = 251 bits (640), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/569 (30%), Positives = 277/569 (48%), Gaps = 82/569 (14%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
+ ++L +Q+ V+++YE + G I+ DEMGLGKT+Q I + L G L
Sbjct: 293 IYSLLFNYQKTCVQWLYELY-----QQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTG 347
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKW--------LGGRVAALPIDGGSKAEIDNKLNSFMQ 254
P++ IV P++++K WCNE W L + + D K + ++ N M
Sbjct: 348 PVL----IVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMN 403
Query: 255 --------------TYGRRPVNP----------------ILVISYETFRSHASVLHKNEV 284
T ++ + IL+ +Y R H+ L K +
Sbjct: 404 SKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKW 463
Query: 285 GLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTA 344
+ DEGH+++N +S+ LK R++LSGTPIQN+L E +SL F+ G LGT
Sbjct: 464 QYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTL 523
Query: 345 QEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQ 404
F++Q+ PI G + A++ + + L +++ L+RR A ++K LP K E
Sbjct: 524 PVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEM 583
Query: 405 VVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLV-MDK 463
V+ K+T Q+ Y + S + + G N G I L+K+CNHPDL+ D
Sbjct: 584 VLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFG------IDILRKICNHPDLLDRDT 637
Query: 464 IQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNY 523
+ D Y +SGK+ ++ +L++L K +L +
Sbjct: 638 KRHNPD------------YGDPKRSGKM--QVVKQLLLLWHKQGY-------KALLFTQS 676
Query: 524 TQTLDLFERL-----SKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGC 578
Q LD+ E L Y+R+DG+ IK R +V+ FN S + +F+L+++ GG
Sbjct: 677 RQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFD-VFLLTTRVGGL 735
Query: 579 GLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHK 638
G+NL GANR+++FDPDWNP+ D QA R WR GQK+ +YR + GSIEEK+ RQ K
Sbjct: 736 GVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFK 795
Query: 639 KALSSCVVDCEEDVARHFSMSELRSLFQL 667
+ L++ ++ + R F + EL LF L
Sbjct: 796 QFLTNRIL-TDPKQKRFFKIHELHDLFSL 823
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 248 bits (633), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 164/507 (32%), Positives = 266/507 (52%), Gaps = 48/507 (9%)
Query: 142 VLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLA 201
V S LR +Q +G+ ++ E+ I+ADEMGLGKTLQ I+ + L +
Sbjct: 179 VKSGKLRDYQVQGLNWLISLH-----ENKLSGILADEMGLGKTLQTISFLGYLRYVKQIE 233
Query: 202 KPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
P + I+ P S + NW E KW V L + G D N ++
Sbjct: 234 GPFL----IIVPKSTLDNWRREFLKWTPN-VNVLVLHGDKDTRADIVRNIILEARF---- 284
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ SYE + L + ++ DE HR+KN +S Q + +K R+L++GTP
Sbjct: 285 -DVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTP 343
Query: 322 IQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGI 381
+QN+L E ++L++F+ I G ++ F + +E Q++ D E ++QL +
Sbjct: 344 LQNNLHELWALLNFLLPDIFGDSELFDEWFE------QNNSEQDQEIV-----IQQLHSV 392
Query: 382 VNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGM 441
+N L+RR A + K L K E V + MTD+Q + Y +L++ D + G + G
Sbjct: 393 LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDI--DAVNGAVGKREGK 450
Query: 442 TALSSIT-SLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLM 500
T L +I L+K CNHP L FE A P Y + + LI S K++
Sbjct: 451 TRLLNIVMQLRKCCNHPYL-----------FEGAEPGPP------YTTDEHLIFNSGKMI 493
Query: 501 VLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETF 560
+LD +L +K ++++ S ++ LD+ E R ++Y R+DGS + ++R + ++ +
Sbjct: 494 ILDKLLKRLK-EKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEY 552
Query: 561 NKTSNE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
NK ++E F+F+L+++AGG G+NL+ A+ +++FD DWNP D QAM R R GQKK VY
Sbjct: 553 NKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVY 612
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV 646
RF++ +IEEK+++R A K L V+
Sbjct: 613 RFVTENAIEEKVIERAAQKLRLDQLVI 639
>sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo
sapiens GN=RAD26L PE=1 SV=1
Length = 712
Score = 245 bits (625), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/567 (31%), Positives = 283/567 (49%), Gaps = 73/567 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLL------- 195
++ LR +QREG +F+Y G I GCI+ D+MGLGKT+Q I+ + +L
Sbjct: 130 INRYLRDYQREGTRFLY----GHYIHGG-GCILGDDMGLGKTVQVISFLAAVLHKKGTRE 184
Query: 196 --------------RQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGS 241
++ PL+ +IVAP S++ NW +E+ W RV L G
Sbjct: 185 DIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVL--HGNR 242
Query: 242 KAEIDNKLNSFMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQ 301
K DN+L Q I + +YET R L+ E V+ DE HR+KN +++
Sbjct: 243 K---DNELIRVKQRKCE-----IALTTYETLRLCLDELNSLEWSAVIVDEAHRIKNPKAR 294
Query: 302 TYQALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDS 361
+ + LK R+ L+GT +QN++ E + ++ + G+LG+ F+KQ+ P+ GQ
Sbjct: 295 VTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLLGSGTYFKKQFSDPVEHGQRH 354
Query: 362 CASDAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNL 421
A+ E + +++L ++ +RRT L+ LP K +++V +TD QK +Y +
Sbjct: 355 TATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKKEDRMVYCSLTDFQKAVYQTV 414
Query: 422 IKSDAVR----------------------RTMKGGENTKLGMTALSSITSLKKLCNHPDL 459
++++ V +T GE K LS +T L+K+ NH L
Sbjct: 415 LETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVK--TLYLSYLTVLQKVANHVAL 472
Query: 460 VMDK---------IQTGADG-FENAMNILPTGYAASYKSGKLLIELSAKLMVLDTMLAVI 509
+ I+ D F + + A++++ + S K+ VL +L
Sbjct: 473 LQAASTSKQQETLIKRICDQVFSRFPDFVQKSKDAAFETLS-DPKYSGKMKVLQQLLNHC 531
Query: 510 KMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIF 569
+ DK++L S T+ LD+ ++ G Y RLDGS ++R K+V+ FN T + I
Sbjct: 532 R-KNRDKVLLFSFSTKLLDVLQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSTQDVNIC 590
Query: 570 MLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEE 629
++S+ AGG GLN +GAN +V+FDP WNPAND QA+ R +R GQ + V R +S G++EE
Sbjct: 591 LVSTMAGGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEE 650
Query: 630 KMMQRQAHKKALSSCVVDCEEDVARHF 656
M RQ +K+ L CVV E+ R+F
Sbjct: 651 IMYLRQIYKQQL-HCVVVGSENAKRYF 676
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog OS=Caenorhabditis
elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 157/515 (30%), Positives = 267/515 (51%), Gaps = 56/515 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P+Q EG+ ++ C + + I+ADEMGLGKT+Q +T ++TL+++G P +
Sbjct: 616 LHPYQLEGINWLRHCWS-----NGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFL- 669
Query: 207 KAIIVAPSSLVKNWCNEITKW---------LGGRVAALPIDGGSKAEIDNKLN-----SF 252
I AP S + NW E W +G R + + I + +D + S
Sbjct: 670 ---IAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKVSK 726
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
++T + +L+ SYE ++L + ++ DE HRLKN +S ++ L +
Sbjct: 727 IKTLENLKFH-VLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNIQ 785
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RVLL+GTP+QN+L E F L++F+ + F ++ +E +K +
Sbjct: 786 YRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFTAEF--------------SEISKED 831
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+ +E+L ++ ++RR A + +P K E +V ++++ +QK+ Y N++ + +K
Sbjct: 832 Q-IEKLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYYKNILTRNFDALNVK 890
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G M+ ++ I LKK CNHP L M K A +N M G L
Sbjct: 891 NGGTQ---MSLINIIMELKKCCNHPYLFM-KACLEAPKLKNGM-----------YEGSAL 935
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
I+ + K ++L ML +K ++++ S T LD+ E + GYKY R+DGS+T ++
Sbjct: 936 IKNAGKFVLLQKMLRKLK-DGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQ 994
Query: 553 RAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R ++ +N + +F+F+LS++AGG G+NL A+ ++++D DWNP ND QA +R R G
Sbjct: 995 RQDAIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1054
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
QK +YRF++ GS+EE++ K L+ VV
Sbjct: 1055 QKHKVMIYRFVTKGSVEERITSVAKKKMLLTHLVV 1089
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 242 bits (618), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 156/515 (30%), Positives = 268/515 (52%), Gaps = 56/515 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
L P+Q EG+ ++ C + + I+ADEMGLGKT+Q +T +++L+++G P +
Sbjct: 602 LHPYQLEGLNWLRHCWS-----NGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFL- 655
Query: 207 KAIIVAPSSLVKNWCNEITKW---------LGGRVAALPIDGGSKAEIDNKLNSF----- 252
I AP S + NW E +W +G R A + + + ++ + S
Sbjct: 656 ---IAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASK 712
Query: 253 MQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAK 312
M+T + +L+ SYET ++L E G ++ DE HRLKN +S ++ L
Sbjct: 713 MKTTENMKFH-VLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIH 771
Query: 313 RRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKAN 372
RVLL+GTP+QN+L E F L++F+++ + F ++
Sbjct: 772 YRVLLTGTPLQNNLEELFHLLNFLSKERFNQLEAFTAEFN---------------EISKE 816
Query: 373 ERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMK 432
+++E+L ++ ++RR A + +P K+E +V ++++ +QK+ Y N++ + +K
Sbjct: 817 DQIEKLHNLLGPHMLRRLKADVLTGMPSKSELIVRVELSAMQKKWYKNILTRNFDALNVK 876
Query: 433 GGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLL 492
G M+ ++ + LKK CNHP L + K + A +N M G L
Sbjct: 877 NGGTQ---MSLMNVLMELKKCCNHPYLFV-KAELEAPKEKNGM-----------YEGTAL 921
Query: 493 IELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKK 552
I+ S K ++L ML +K ++++ S T+ LD+ E L + GY+Y R+DGS+ +
Sbjct: 922 IKNSGKFVLLQKMLRKLK-DGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQM 980
Query: 553 RAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDG 611
R ++ +N + +FIF+LS++AGG G+NL A+ ++++D DWNP ND QA +R R G
Sbjct: 981 RQDAIDRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLG 1040
Query: 612 QKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
QK +YRF++ S+EEK+ K L+ VV
Sbjct: 1041 QKHKVMIYRFVTKKSVEEKITSVAKKKMLLNHLVV 1075
>sp|Q9JIM3|RAD26_MOUSE Putative DNA repair and recombination protein RAD26-like OS=Mus
musculus GN=Rad26l PE=2 SV=2
Length = 699
Score = 242 bits (617), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 182/607 (29%), Positives = 294/607 (48%), Gaps = 80/607 (13%)
Query: 101 KALHDPTAPNALVLYTPPQLSAHDLLKIDKDKIQVHVVVDPVLSNILRPHQREGVKFMYE 160
K L P P+ + P L++ L D D I ++ LR +QREG +F+Y
Sbjct: 86 KDLEKPYFPDRKI----PSLASAFQLSEDGDSIPY------TINRYLRDYQREGAQFLYR 135
Query: 161 CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGP------------LAKPLIDKA 208
R GCI+ D+MGLGKT+Q I+ + +L + L K + K
Sbjct: 136 HYIEGR-----GCILGDDMGLGKTIQVISFLAAVLHKKGTREDIENNMPEFLLKSMKKKP 190
Query: 209 --------IIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRP 260
+IVAP S++ NW +E+ W RV L GSK DN+L Q
Sbjct: 191 PSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVL---HGSKK--DNELLRLKQRKCE-- 243
Query: 261 VNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGT 320
I + +YET R L+ E ++ DE HR+KN +++ + + +K K R+ L+GT
Sbjct: 244 ---IALTTYETLRLCLEELNSLEWSAIIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGT 300
Query: 321 PIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIG 380
+QN++ E + ++ + G+LG+ F+KQ+ P+ GQ A+ E + + +L
Sbjct: 301 VLQNNMKELWCVMDWAVPGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAK 360
Query: 381 IVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLG 440
++ +RRT L+ LP K +++V +TD QK +Y +++++ V + + G
Sbjct: 361 KMSGWFLRRTKTLIKGQLPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCG 420
Query: 441 --------------------MTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPT 480
LS +T L+K+ NH L+ + + + E + +
Sbjct: 421 SGQKRRKCCYKTNSRGDTVRTLCLSYLTVLQKVANHVALL--QAASTSKHQETVIKRICD 478
Query: 481 GYAASY-----KSGKLLIE------LSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDL 529
+ + KS E S K+ VL +L + DK++L S T+ LD+
Sbjct: 479 RVFSRFPDFVQKSKDAAFETLSDPKYSGKMKVLQQLLNHFR-KQRDKVLLFSFSTKLLDV 537
Query: 530 FERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTSNEFIFMLSSKAGGCGLNLIGANRLV 589
++ G Y RLDGS ++R K+V+ FN + + I ++S+ AGG GLN +GAN ++
Sbjct: 538 LQQYCMASGLDYRRLDGSTKSEERLKIVKEFNSSQDVNICLVSTMAGGLGLNFVGANVVI 597
Query: 590 MFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVVDCE 649
+FDP WNPAND QA+ R +R GQ + V R +S G++EE M RQ +K+ L CVV
Sbjct: 598 LFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQVYKQQL-HCVVVGS 656
Query: 650 EDVARHF 656
E+ R+F
Sbjct: 657 ENAKRYF 663
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 266/514 (51%), Gaps = 59/514 (11%)
Query: 147 LRPHQREGVKFM-YECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLI 205
L P Q EGV ++ Y G+ I+ADEMGLGKT+Q + +++L ++G P +
Sbjct: 267 LHPFQIEGVSWLRYSWGQGI------PTILADEMGLGKTIQTVVFLYSLFKEGHCRGPFL 320
Query: 206 DKAIIVAPSSLVKNWCNEITKW---------LGGRVAALPIDGG--SKAEIDNKLNSFMQ 254
I P S + NW E+ W +GG+ A I S E+ K Q
Sbjct: 321 ----ISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRENQ 376
Query: 255 TYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRR 314
T + V ++ SYE A+ L + ++ DE HRL++ +S+ ++ L + +
Sbjct: 377 TQYKFNV---MLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYK 433
Query: 315 VLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANER 374
+LL+GTP+QN+L E F L++F++ G Q F+ ++ +D + + +R
Sbjct: 434 LLLTGTPLQNNLEELFHLLNFLSSGKFNDLQTFQAEF------------TDVSKEEQVKR 481
Query: 375 LEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGG 434
L + I+ ++RR A + K +P K+E +V ++++ +QK+ Y +++ + KGG
Sbjct: 482 LHE---ILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFYKHILTKNFKALNQKGG 538
Query: 435 ENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTG-YAASYKSGKLLI 493
+ L+ + L+K CNHP L + I P+G Y S L
Sbjct: 539 GRV---CSLLNIMMDLRKCCNHPYLFPSAAEEAT--------ISPSGLYEMSS-----LT 582
Query: 494 ELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKR 553
+ S KL +L ML +K + +++L S T+ L++ E + GY+Y R+DGS+ R
Sbjct: 583 KASGKLDLLSKMLKQLK-ADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLR 641
Query: 554 AKVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQ 612
K ++ FN S F+F+LS++AGG G+NL A+ +++FD DWNP ND QA +R R GQ
Sbjct: 642 QKAIDRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQ 701
Query: 613 KKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
KK +YRF++ S+EE++MQ HK L+ VV
Sbjct: 702 KKKVMIYRFVTHNSVEERIMQVAKHKMMLTHLVV 735
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 237 bits (605), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 257/502 (51%), Gaps = 51/502 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
LR +Q G+ ++ E+ I+ADEMGLGKTLQ I L+ L + P
Sbjct: 187 LRDYQIRGLNWLISLY-----ENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGP--- 238
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+++ P S + NW NE +W+ RV D +A +F++ +
Sbjct: 239 -HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRA-------AFIRDEMMPGEWDVC 290
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
V SYE SV K ++ DE HR+KN +S+ + + K+ R+LL+GTP+QN+
Sbjct: 291 VTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNN 350
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E ++L++F+ + +A +F ++T +C D + +E+L ++
Sbjct: 351 LHELWALLNFLLPDVFNSADDFDSWFDT------KNCLGD------QKLVERLHAVLKPF 398
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
L+RR + K LP K E + + ++ +Q+E YT ++ D G + M L+
Sbjct: 399 LLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDK---MRLLN 455
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
+ L+K CNHP L DG E Y + + ++ S K++ LD +
Sbjct: 456 ILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDEHIVGNSGKMVALDKL 498
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
LA IK ++++ S T+ LD+ E RGY+Y RLDG ++R + ++ FN S
Sbjct: 499 LARIK-EQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNS 557
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
++FIFMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQKKP V+R ++
Sbjct: 558 SKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITD 617
Query: 625 GSIEEKMMQRQAHKKALSSCVV 646
++EE++++R K L S V+
Sbjct: 618 NTVEERIVERAEIKLRLDSIVI 639
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 237 bits (605), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 163/516 (31%), Positives = 265/516 (51%), Gaps = 58/516 (11%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGC--IMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
L P+Q EG+ ++ R A G I+ADEMGLGKT+Q I +++L ++G P
Sbjct: 700 LHPYQLEGLNWL-------RFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPY 752
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEI--------DNKLNSFMQT 255
+ + AP S + NW E W V D S++ I DN + S +
Sbjct: 753 L----VSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKV 808
Query: 256 YG-RRPVN---PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
+ ++ V +L+ SYE ++L E ++ DE HRLKN +S+ ++ L K
Sbjct: 809 FRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKI 868
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
++LL+GTP+QN+L E F L++F+ + F +++ +D +
Sbjct: 869 DYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF------------ADISKEDQ 916
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
++L L+G ++RR A + K +P KTE +V ++++ +QK+ Y ++ +
Sbjct: 917 IKKLHDLLGP---HMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNS 973
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
KGG N ++ L+ + LKK CNHP L +LP G SY G
Sbjct: 974 KGGGNQ---VSLLNIMMDLKKCCNHPYLFPVAAVEAP--------VLPNG---SY-DGSS 1018
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
L++ S KLM+L ML ++ ++++ S T+ LDL E + GYKY R+DG +T
Sbjct: 1019 LVKSSGKLMLLQKMLKKLR-DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGG 1077
Query: 552 KRAKVVETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRD 610
R + ++ FN + +F F+LS++AGG G+NL A+ ++++D DWNP ND QA +R R
Sbjct: 1078 LRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRI 1137
Query: 611 GQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
GQ K +YRF++ S+EE++ Q K L+ VV
Sbjct: 1138 GQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVV 1173
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 162/511 (31%), Positives = 256/511 (50%), Gaps = 53/511 (10%)
Query: 154 GVKFMY--ECVTGVRIEDAYGC--IMADEMGLGKTLQCITLMWTLLRQGPLAKPLIDKAI 209
G MY E + +R A G I+ADEMGLGKT+Q I +++L ++G P +
Sbjct: 734 GTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFL---- 789
Query: 210 IVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTY---GRRPVN--- 262
+ AP S + NW E W V D S+A I SF G++
Sbjct: 790 VSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKR 849
Query: 263 ------PILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVL 316
+L+ SYE + L ++ DE HRLKN +S+ ++ L G K ++L
Sbjct: 850 EAQVKFHVLLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLL 909
Query: 317 LSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLE 376
L+GTP+QN+L E F L++F+ + F +++ +D + ++L
Sbjct: 910 LTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF------------ADISKEDQIKKLH 957
Query: 377 QLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGEN 436
L+G ++RR A + K +P KTE +V ++++ +QK+ Y ++ + +GG N
Sbjct: 958 DLLGP---HMLRRLKADVFKNMPAKTELIVRVELSPMQKKYYKYILTRNFEALNSRGGGN 1014
Query: 437 TKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELS 496
++ L+ + LKK CNHP L F A P + +Y+ G LI+ S
Sbjct: 1015 Q---VSLLNIMMDLKKCCNHPYL-----------FPVAAMESPKLPSGAYEGG-ALIKSS 1059
Query: 497 AKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKV 556
KLM+L ML +K ++++ S T+ LDL E GYKY R+DG +T R +
Sbjct: 1060 GKLMLLQKMLRKLK-EQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEA 1118
Query: 557 VETFNKT-SNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKP 615
++ FN + +F F+LS++AGG G+NL A+ +++FD DWNP ND QA +R R GQ
Sbjct: 1119 IDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANK 1178
Query: 616 CFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
+YRF++ S+EE++ Q K L+ VV
Sbjct: 1179 VMIYRFVTRASVEERITQVAKRKMMLTHLVV 1209
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 155/523 (29%), Positives = 265/523 (50%), Gaps = 66/523 (12%)
Query: 143 LSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAK 202
L +L P+Q EG+ F+ I+ADEMGLGKT+Q I L+ +L + +
Sbjct: 269 LKGLLHPYQLEGLNFLR-----FSWSKQTHVILADEMGLGKTIQSIALLASLFEENLIPH 323
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFM--------- 253
+++AP S ++NW E W ++ + G ++A + + F
Sbjct: 324 ------LVIAPLSTLRNWEREFATW-APQMNVVMYFGTAQARAVIREHEFYLSKDQKKIK 376
Query: 254 ---------QTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQ 304
++ +R +L+ SYE ++VL + ++ DEGHRLKN +S+ +
Sbjct: 377 KKKSGQISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFS 436
Query: 305 ALMGLKAKRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCAS 364
+L + R+LL+GTP+QN+L E F L+HF++ G G+ +EF+++++
Sbjct: 437 SLTQYSSNHRILLTGTPLQNNLDELFMLMHFLDAGKFGSLEEFQEEFKD----------- 485
Query: 365 DAERTKANERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKS 424
E++ +L ++ L+RR + K +P K E ++ + ++ LQKE Y +
Sbjct: 486 ----INQEEQISRLHKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTR 541
Query: 425 DAVRRTMKGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAA 484
+ T KGG L + + L+K+C HP ++ +G E P + A
Sbjct: 542 NYQVLTKKGGAQISLN----NIMMELRKVCCHPYML--------EGVE------PVIHDA 583
Query: 485 SYKSGKLLIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRL 544
+ ++ K L+E KL +LD M+ +K ++++ + + LDL E + ++Y R+
Sbjct: 584 N-EAFKQLLESCGKLQLLDKMMVKLK-EQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERI 641
Query: 545 DGSMTIKKRAKVVETFN-KTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQA 603
DG + +R ++ FN K SN+F F+LS++AGG G+NL A+ ++++D DWNP D QA
Sbjct: 642 DGKVGGAERQIRIDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQA 701
Query: 604 MARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
MAR R GQ +YR ++ G+IEE+MMQ K L VV
Sbjct: 702 MARAHRLGQTNKVMIYRLINRGTIEERMMQLTKKKMVLEHLVV 744
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 232 bits (592), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 263/528 (49%), Gaps = 63/528 (11%)
Query: 133 IQVHVVVDPVLSNILRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMW 192
I+ V V LR +Q G+ ++ E+ I+ADEMGLGKTLQ I L+
Sbjct: 169 IRFEVSPSYVKGGPLRDYQIRGLNWLISLY-----ENGVNGILADEMGLGKTLQTIALLG 223
Query: 193 TLLRQGPLAKPLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNS 251
L + P +++ P S + NW NE +W+ RV D ++A +
Sbjct: 224 YLKHYRNIPGP----HMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARA-------A 272
Query: 252 FMQTYGRRPVNPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKA 311
F++ + V SYE SV K ++ DE HR+KN +S+ + + K+
Sbjct: 273 FIRDEMMPGEWDVCVTSYEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKS 332
Query: 312 KRRVLLSGTPIQNDLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKA 371
R+LL+GTP+QN+L E ++L++F+ + +A +F ++T +C D
Sbjct: 333 TNRLLLTGTPLQNNLHELWALLNFLLPDVFNSADDFDSWFDT------KNCLGD------ 380
Query: 372 NERLEQLIGIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTM 431
+ +E+L ++ L+RR + K LP K E + + ++ +Q+E YT ++ D
Sbjct: 381 QKLVERLHAVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNS 440
Query: 432 KGGENTKLGMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKL 491
G + M L+ + L+K CNHP L DG E Y + +
Sbjct: 441 SGKMDK---MRLLNILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDEH 480
Query: 492 LIELSAKLMVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIK 551
++ S K++VLD +LA +K ++++ S T+ LD+ E RGY+Y RLDG +
Sbjct: 481 IVSNSGKMVVLDKLLAKLK-EQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHE 539
Query: 552 KRA------------KVVETFNK-TSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPA 598
+R + +E FN S++FIFMLS++AGG G+NL A+ ++++D DWNP
Sbjct: 540 EREDKFLEVEFLGQREAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQ 599
Query: 599 NDDQAMARVWRDGQKKPCFVYRFLSTGSIEEKMMQRQAHKKALSSCVV 646
D QAM R R GQKKP V+R ++ ++EE++++R K L S V+
Sbjct: 600 VDLQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVI 647
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 173/561 (30%), Positives = 274/561 (48%), Gaps = 78/561 (13%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLM----WTLLRQGPLAK 202
LRP+Q +GVK++ C +++ GCI+ DEMGLGKT Q I+L+ +L GP
Sbjct: 35 LRPYQLDGVKWLSLC-----MKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPF-- 87
Query: 203 PLIDKAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPV 261
+++ P ++++NW E+ ++ V D +AE+ L S P
Sbjct: 88 ------LVLCPLAVLENWRQELERFCPSLSVICYTGDKEKRAELQQNLKS-------DPR 134
Query: 262 NPILVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTP 321
+L+ +YE A L + +++ DE HRLKN ES +Q L RVLL+GTP
Sbjct: 135 FHVLLTTYEMCLKDARYLKSWKWKILVVDEAHRLKNQESLLHQTLKEFTVGFRVLLTGTP 194
Query: 322 IQNDLLEYFSLVHFVNQGIL--GTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLI 379
IQN+L E +SL+ F+ + ++F Y +D + A +++L
Sbjct: 195 IQNNLQEVYSLLTFIQPSVFLPEAVEDFVNAY------------ADIQTEPA--LVDELH 240
Query: 380 GIVNRCLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKL 439
++ L+RR A ++ LP KTE VV ++ LQK Y ++ D T+L
Sbjct: 241 QVLQPFLLRRVKAEVAAELPKKTELVVFHGLSALQKRYYKAILMRDLDAFRTDQSTKTRL 300
Query: 440 GMTALSSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKL 499
L+ + L+K +HP L DG E ++ G+ L+E S KL
Sbjct: 301 ----LNVLMQLRKCVDHPYLF--------DGVE----------PEPFEMGEHLVEASGKL 338
Query: 500 MVLDTMLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVET 559
+LD+MLA ++ ++L S T+ LD+ + + RGY Y RLDGS+ ++R ++
Sbjct: 339 SLLDSMLAYLQ-EGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKN 397
Query: 560 FNKTSNEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVY 619
F+ T + FIF+LS+KAGG G+NL A+ ++ D D+NP ND QA AR R GQ +P V
Sbjct: 398 FS-TKDVFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVI 456
Query: 620 RFLSTGSIEEKMMQRQAHKKALSSCVV--------DCEEDVARHFSMSEL-----RSLFQ 666
R L +IEE + R K L+ V+ D + A +SE+ L
Sbjct: 457 RLLGRDTIEEIIYSRAVSKLRLTDTVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKLLS 516
Query: 667 LEENTISDTHDKIKCSRCVNG 687
EE+++ D ++ + +G
Sbjct: 517 SEESSVQDVDLQLILGQSRDG 537
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 155/502 (30%), Positives = 255/502 (50%), Gaps = 51/502 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
LR +Q G+ ++ E+ I+ADEMGLGKTLQ I+L+ + + P
Sbjct: 179 LRDYQVRGLNWLISLY-----ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGP--- 230
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+++ P S + NW +E KW+ R L D +A +F++ +
Sbjct: 231 -HMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRA-------AFVRDVLLPGEWDVC 282
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
V SYE SV K ++ DE HR+KN +S+ + + K R+LL+GTP+QN+
Sbjct: 283 VTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 342
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E +SL++F+ + +A +F ++T ++C D + +E+L ++
Sbjct: 343 LHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGD------QKLVERLHMVLRPF 390
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
L+RR A + K LP K E + + ++ +Q+E YT ++ D + G+ K M L+
Sbjct: 391 LLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKD-IDILNSAGKMDK--MRLLN 447
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
+ L+K CNHP L DG E Y + L+ S K++VLD +
Sbjct: 448 ILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDMHLVTNSGKMVVLDKL 490
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
L +K ++++ S T+ LD+ E R Y+Y RLDG +R + +N+ S
Sbjct: 491 LPKLK-EQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNS 549
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+F+FMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQ K V+RF++
Sbjct: 550 TKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITD 609
Query: 625 GSIEEKMMQRQAHKKALSSCVV 646
++EE++++R K L S V+
Sbjct: 610 NTVEERIVERAEMKLRLDSIVI 631
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 226 bits (575), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 154/502 (30%), Positives = 255/502 (50%), Gaps = 51/502 (10%)
Query: 147 LRPHQREGVKFMYECVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPLID 206
LR +Q G+ ++ E+ I+ADEMGLGKTLQ I+L+ + + P
Sbjct: 180 LRDYQVRGLNWLISLY-----ENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGP--- 231
Query: 207 KAIIVAPSSLVKNWCNEITKWLGG-RVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPIL 265
+++ P S + NW +E +W+ R L D +A +F++ +
Sbjct: 232 -HMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRA-------AFVRDVLLPGEWDVC 283
Query: 266 VISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQND 325
V SYE SV K ++ DE HR+KN +S+ + + K R+LL+GTP+QN+
Sbjct: 284 VTSYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNN 343
Query: 326 LLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNRC 385
L E +SL++F+ + +A +F ++T ++C D + +E+L ++
Sbjct: 344 LHELWSLLNFLLPDVFNSADDFDSWFDT------NNCLGD------QKLVERLHMVLRPF 391
Query: 386 LIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTALS 445
L+RR A + K LP K E + + ++ +Q+E YT ++ D + G+ K M L+
Sbjct: 392 LLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKD-IDILNSAGKMDK--MRLLN 448
Query: 446 SITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDTM 505
+ L+K CNHP L DG E Y + L+ S K++VLD +
Sbjct: 449 ILMQLRKCCNHPYLF--------DGAEPG---------PPYTTDMHLVTNSGKMVVLDKL 491
Query: 506 LAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNK-TS 564
L +K ++++ S T+ LD+ E R Y+Y RLDG +R + +N+ S
Sbjct: 492 LPKLK-EQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNS 550
Query: 565 NEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLST 624
+F+FMLS++AGG G+NL A+ ++++D DWNP D QAM R R GQ K V+RF++
Sbjct: 551 TKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITD 610
Query: 625 GSIEEKMMQRQAHKKALSSCVV 646
++EE++++R K L S V+
Sbjct: 611 NTVEERIVERAEMKLRLDSIVI 632
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 154/503 (30%), Positives = 253/503 (50%), Gaps = 49/503 (9%)
Query: 147 LRPHQREGVKFMYE--CVTGVRIEDAYGCIMADEMGLGKTLQCITLMWTLLRQGPLAKPL 204
LR +Q EG+ ++ C I+ADEMGLGKT+Q I+ + L Q L P
Sbjct: 484 LRDYQLEGLNWLAHSWCKNN-------SVILADEMGLGKTIQTISFLSYLFHQHQLYGPF 536
Query: 205 IDKAIIVAPSSLVKNWCNEITKWLGGRVAALPIDGGSKAEIDNKLNSFMQTYGRRPVNPI 264
+ IV P S + +W E W + + G + + ++ + +R
Sbjct: 537 L----IVVPLSTLTSWQREFEIW-APEINVVVYIGDLMSRNTIREYEWIHSQTKRLKFNA 591
Query: 265 LVISYETFRSHASVLHKNEVGLVLCDEGHRLKNCESQTYQALMGLKAKRRVLLSGTPIQN 324
L+ +YE +VL + DE HRLKN +S Y+ L+ K+ R+L++GTP+QN
Sbjct: 592 LITTYEILLKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQN 651
Query: 325 DLLEYFSLVHFVNQGILGTAQEFRKQYETPILRGQDSCASDAERTKANERLEQLIGIVNR 384
L E +SL+HF I+ EF + +E +G+++ + L ++
Sbjct: 652 SLKELWSLLHF----IMPEKFEFWEDFEEDHGKGRENG------------YQSLHKVLEP 695
Query: 385 CLIRRTSALLSKYLPVKTEQVVCIKMTDLQKELYTNLIKSDAVRRTMKGGENTKLGMTAL 444
L+RR + K LP K EQ++ ++M+ LQK+ Y ++ + + KG + G L
Sbjct: 696 FLLRRVKKDVEKSLPAKVEQILRVEMSALQKQYYKWILTRN-YKALAKGTRGSTSGF--L 752
Query: 445 SSITSLKKLCNHPDLVMDKIQTGADGFENAMNILPTGYAASYKSGKLLIELSAKLMVLDT 504
+ + LKK CNH L+ + EN IL + LI S KL++LD
Sbjct: 753 NIVMELKKCCNHCYLIKPPEENER---ENGQEILLS-----------LIRSSGKLILLDK 798
Query: 505 MLAVIKMTTDDKIVLVSNYTQTLDLFERLSKLRGYKYVRLDGSMTIKKRAKVVETFNKTS 564
+L ++ +++++ S + LD+ ++ Y + RLDGS+ + R + ++ FN
Sbjct: 799 LLTRLR-ERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADG 857
Query: 565 NE-FIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDDQAMARVWRDGQKKPCFVYRFLS 623
+E F F+LS++AGG G+NL A+ +V+FD DWNP ND QA AR R GQKK +YR ++
Sbjct: 858 SEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVT 917
Query: 624 TGSIEEKMMQRQAHKKALSSCVV 646
G++EE++++R K L V+
Sbjct: 918 KGTVEEEIIERAKKKMVLDHLVI 940
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 281,241,946
Number of Sequences: 539616
Number of extensions: 12058353
Number of successful extensions: 36794
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 324
Number of HSP's successfully gapped in prelim test: 103
Number of HSP's that attempted gapping in prelim test: 35052
Number of HSP's gapped (non-prelim): 919
length of query: 755
length of database: 191,569,459
effective HSP length: 125
effective length of query: 630
effective length of database: 124,117,459
effective search space: 78193999170
effective search space used: 78193999170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)