BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy5649
(305 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 265 bits (676), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 132/315 (41%), Positives = 204/315 (64%), Gaps = 15/315 (4%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E RL+
Sbjct: 379 FKSYGIPAPRGLLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQI 438
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRL--HELQACVVLLAV 120
F A PS++ +D LD LC R +S+ E+R+++ L+T +D + + V++L
Sbjct: 439 FAEATLRHPSIIFIDELDALCPKREGAQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGA 498
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T +D +LR PGR D+EIE+ +P+ R IL LL +VPH L+ ++ ++A HG
Sbjct: 499 TNRPQALDAALRRPGRFDKEIEIGIPNAQDRLDILQKLLRRVPHLLTKAELLRLANNAHG 558
Query: 181 FVGGDLATLLSNA----------TSALLVETEGTGQV-LSYDGVMRALDHVKPSAMRQVL 229
+VG DL L + A L +++ G V ++ + ++ ++ ++PSAMR+V
Sbjct: 559 YVGADLKALCNEAGLHALRRVLRKQPNLPDSKVAGMVKITLNDFLQGMNDIRPSAMREVA 618
Query: 230 VEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIA 289
++VPNV WSDIGG + +KLKL+Q+VEWPLKHP++F R+GI+PP+G+L++GPPGCSKTMIA
Sbjct: 619 IDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIA 678
Query: 290 KALATESKLNFISVK 304
KALA ES LNF+++K
Sbjct: 679 KALANESGLNFLAIK 693
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 100/189 (52%), Gaps = 6/189 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+L+YG G KT + +LA+ ++ + I+ ++ +K+ GE+E ++ F A
Sbjct: 657 GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKA 716
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS----DQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
APS++ D LD L R S + R+L+ L+T++D + +L+ V +LA T
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKN-VTVLAATNRP 775
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGR+D+ I +P+P R IL+ +P S D + ++ T + G
Sbjct: 776 DRIDKALMRPGRIDRIIYVPLPDAATRREILNLQFHSMPISNEVD-LDELVLQTDTYSGA 834
Query: 185 DLATLLSNA 193
++ + A
Sbjct: 835 EIIAVCKEA 843
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG + +R+ +E PLK PE F GI PRG+L++GPPG KTMIA+A+A
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 295 E 295
E
Sbjct: 410 E 410
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 264 bits (675), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 134/316 (42%), Positives = 202/316 (63%), Gaps = 17/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+ G+L+YG GTGKT + ++A+ + + VI ++ SKFYGE E +L+
Sbjct: 379 FKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQI 438
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRLHE--LQACVVLLAV 120
F A PS++ +D LD LC R +++ E+R+++ L+T +D + + V++L
Sbjct: 439 FAEATLRHPSIIFIDELDALCPKREGAQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGA 498
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T +D +LR PGR D+EIE+ VP+ R IL LL +VPH L+ ++ Q+A HG
Sbjct: 499 TNRPHALDAALRRPGRFDKEIEIGVPNAQDRLDILQKLLRRVPHLLTEAELLQLANSAHG 558
Query: 181 FVGGDLATLLSNATSALL------------VETEGTGQVLSYDGVMRALDHVKPSAMRQV 228
+VG DL L + A L V+ G ++ D ++A++ ++PSAMR++
Sbjct: 559 YVGADLKVLCNEAGLCALRRILKKQPNLPDVKVAGLVKITLKD-FLQAMNDIRPSAMREI 617
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
++VPNV WSDIGG + +KLKL Q+VEWPLKHPE+F R+GI+PP+G+L++GPPGCSKTMI
Sbjct: 618 AIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMI 677
Query: 289 AKALATESKLNFISVK 304
AKALA ES LNF+++K
Sbjct: 678 AKALANESGLNFLAIK 693
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 110/218 (50%), Gaps = 7/218 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+L+YG G KT + +LA+ ++ + I+ ++ +K+ GE+E ++ F A
Sbjct: 657 GIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKA 716
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS----DQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
APS++ D LD L R S + R+L+ L+T++D + +L+ V +LA T
Sbjct: 717 RAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKD-VTILAATNRP 775
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGR+D+ I +P+P R I +P S D + ++ T + G
Sbjct: 776 DRIDKALMRPGRIDRIIYVPLPDAATRREIFKLQFHSMPVSNEVD-LDELILQTDAYSGA 834
Query: 185 DLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKP 222
++ + A + L +E + ++ +AL V P
Sbjct: 835 EIVAVCREA-ALLALEEDIQANLIMKRHFTQALSTVTP 871
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + IGG +R+ +E PLK PE F GI PRG+L++GPPG KTMIA+A+A
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 295 E 295
E
Sbjct: 410 E 410
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 251 bits (642), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 133/316 (42%), Positives = 198/316 (62%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
Q G++ G+L+YG GTGKT + ++A+ + H + I ++ SK+YGE+E RL+
Sbjct: 208 FQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREI 267
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A ++APS++ +D +D + R + ERR+++ L+ +D L E + V+++A T
Sbjct: 268 FEEAKENAPSIIFIDEIDSIAPKREEVTGEVERRVVAQLLALMDGL-EARGDVIVIAATN 326
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +LR PGR D+EIE+ VP ++ R IL K+P + D ++++A +T+GFV
Sbjct: 327 RPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVD-LEELAELTNGFV 385
Query: 183 GGDLATLLSNATSALL--------VETEG-TGQVL-----SYDGVMRALDHVKPSAMRQV 228
G DL L A L +E E +V+ + + M AL +++PSAMR+V
Sbjct: 386 GADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALKNIEPSAMREV 445
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
LVEVPNVKW DIGG + K +L ++VEWPLK+PE F IKPPRGIL+FGPPG KT++
Sbjct: 446 LVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLL 505
Query: 289 AKALATESKLNFISVK 304
AKA+A ES NFISVK
Sbjct: 506 AKAVANESNANFISVK 521
Score = 97.8 bits (242), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 7/193 (3%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
++ +K GIL++G GTGKT L ++A+ + + ++ ++ SK+ GE+E ++
Sbjct: 481 FRAANIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREM 540
Query: 65 FDAALDHAPSLLLLDNLDVLCTGR---NRSDQERRLLSCLVTQVDRLHELQACVVLLAVT 121
F A AP ++ D +D L R S R++S L+T++D L EL+ VV++A T
Sbjct: 541 FRKARQVAPCVIFFDEIDSLAPRRGGIGDSHVTERVVSQLLTELDGLEELKD-VVVIAAT 599
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHG 180
D +D +L PGRL++ I +P P + R I L P L+ D I+++A T G
Sbjct: 600 NRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKP--LADDVNIEELAEKTEG 657
Query: 181 FVGGDLATLLSNA 193
+ G D+ + A
Sbjct: 658 YSGADIEAVCREA 670
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 219 HVKPSAMRQVLVEVPNVKWSDIGG-QDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILM 277
+K +V VP+V + DIGG + E++L +R+ +E PLKHPE F RLGI+PP+G+L+
Sbjct: 163 ELKEKPAEEVKRAVPDVTYEDIGGLKRELRL-VREMIELPLKHPELFQRLGIEPPKGVLL 221
Query: 278 FGPPGCSKTMIAKALATESKLNFISV 303
+GPPG KT+IAKA+A E +FI +
Sbjct: 222 YGPPGTGKTLIAKAVANEVDAHFIPI 247
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 251 bits (640), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/301 (42%), Positives = 192/301 (63%), Gaps = 12/301 (3%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
G+L+YG GTGKT ++ ++A+ I + K+ GE E RL+ F+ A H PS
Sbjct: 315 GVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPS 374
Query: 75 LLLLDNLDVLCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
++ +D +D L R S+ E R ++ L+T +D + VV++A T +++D +LR
Sbjct: 375 IIFIDEIDALAPKRTEDVSEAESRAVATLLTLLDGMAN-AGKVVVIAATNRPNSIDEALR 433
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLSN 192
PGRL++EIE+ +P + R I+ LL+ VP+ ++ Q++ +A TH +VG DLA ++
Sbjct: 434 RPGRLEKEIEIGIPDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVRE 493
Query: 193 A-------TSALLVETEGTG--QVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQ 243
A T +L +T G + D + AL V+ SAMR+ ++E PNV WSDIGGQ
Sbjct: 494 AALRAIKRTISLQKDTSGLDIFGAVQMDDLEFALSSVRQSAMREFMMESPNVHWSDIGGQ 553
Query: 244 DEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+EVK KL++SVEWPL H E F+RLG++PP+G+L++GPPGCSKT+ AKA+ATE+ LNFI+V
Sbjct: 554 EEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAV 613
Query: 304 K 304
K
Sbjct: 614 K 614
Score = 88.2 bits (217), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 96/185 (51%), Gaps = 2/185 (1%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+L+YG G KT ++A+ ++ + ++ ++F KF GE+E ++ F A
Sbjct: 578 GVRPPKGVLLYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKA 637
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVD 128
+PS++ D +D L R + R+++ L+ ++D + L+ V++LA T D +D
Sbjct: 638 RQASPSVIFFDEIDALTANRGEDNSSDRVVAALLNELDGIEALR-NVLVLAATNRPDMID 696
Query: 129 VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLAT 188
+L PGRLD+ + + P+ + R I+ K+ + D + +A T G G ++
Sbjct: 697 PALMRPGRLDRLLYVGPPNFEARKQIVKIQAEKMKFAEDVD-LDLIAEKTEGCSGAEVVA 755
Query: 189 LLSNA 193
L A
Sbjct: 756 LCQEA 760
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V +S IGG ++R VE P ++PE F I PPRG+L++GPPG KTM+ +A+A
Sbjct: 276 VTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAA 335
Query: 295 ESKLNFISV 303
E+ ++
Sbjct: 336 EANAQVFTI 344
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/312 (42%), Positives = 191/312 (61%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+L+ G GTGKT L ++A+ + VI ++ SK+ GE E L+ F+ A
Sbjct: 209 GIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEA 268
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
++APS++ +D +D + R+ + + ERRL++ L+T +D L + VV++ T +
Sbjct: 269 EENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKG-RGQVVVIGATNRPNA 327
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR PGR D+EI + VP R+ R IL +P + D + +A +THGFVG DL
Sbjct: 328 LDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVD-LDYLADVTHGFVGADL 386
Query: 187 ATLLSNAT---------SALLVETEGTGQVL-----SYDGVMRALDHVKPSAMRQVLVEV 232
A L A S L E +VL + D AL V+PSAMR+VLVEV
Sbjct: 387 AALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVEV 446
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PNVKW DIGG +EVK +LR++VEWPLK E F ++G++PP+G+L+FGPPG KT++AKA+
Sbjct: 447 PNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAV 506
Query: 293 ATESKLNFISVK 304
A ES NFISVK
Sbjct: 507 ANESGANFISVK 518
Score = 95.9 bits (237), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 113/213 (53%), Gaps = 9/213 (4%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+L++G GTGKT L ++A+ + + ++ ++FSK+ GE+E ++ F A
Sbjct: 482 GVRPPKGVLLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKA 541
Query: 69 LDHAPSLLLLDNLDVLCTGRNR---SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
AP ++ D +D + R R S ++++ L+T++D + E + VV++A T D
Sbjct: 542 RQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKD-VVVIAATNRPD 600
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGG 184
+D +L PGRLD+ I +PVP R I + +L+ D ++++A T G+ G
Sbjct: 601 IIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSM--NLAEDVNLEELAKKTEGYTGA 658
Query: 185 DLATLLSNATSALLVETEGTGQVLSYDGVMRAL 217
D+ L A A+L E G+ + +R L
Sbjct: 659 DIEALCREA--AMLAVRESIGKPWDIEVKLREL 689
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 2/112 (1%)
Query: 189 LLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKL 248
+L A + ++V T G V D L S +++ +VP+V + DIGG E
Sbjct: 132 VLGTALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKET--KVPDVTYEDIGGLKEEVK 189
Query: 249 KLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNF 300
K+R+ +E P++HPE F +LGI+PP+G+L+ GPPG KT++AKA+A E+ NF
Sbjct: 190 KVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANF 241
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 195/315 (61%), Gaps = 20/315 (6%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+++YG GTGKT + ++A+ + + I ++ SK+YG++E +L+ F A
Sbjct: 220 GITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKA 279
Query: 69 LDHAPSLLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+ APS++ +D +D + R + + ERR+++ L+T +D + E + V+++ T +D
Sbjct: 280 EETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKE-RGHVIVIGATNRIDA 338
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQ----IQQVAFITHGFV 182
+D +LR PGR D+EIE+ VP R+ R IL +P +S ++ ++++A T+GFV
Sbjct: 339 IDPALRRPGRFDREIEIGVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFV 398
Query: 183 GGDLATLLS----NATSALLVETEG---------TGQVLSYDGVMRALDHVKPSAMRQVL 229
G DLA L+ NA L E + V++ D AL ++PS++R+V+
Sbjct: 399 GADLAALVRESAMNALRRYLPEIDLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVM 458
Query: 230 VEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIA 289
VEVPNV W DIGG ++VK +++++VE PL P+ F RLGI+P +G L++GPPG KT++A
Sbjct: 459 VEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLA 518
Query: 290 KALATESKLNFISVK 304
KA+ATES NFIS+K
Sbjct: 519 KAVATESNANFISIK 533
Score = 96.7 bits (239), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 219 HVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMF 278
++ +VL EV + + DIGG E K+R+ +E PLKHPE F RLGI PP+G++++
Sbjct: 171 EIREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILY 230
Query: 279 GPPGCSKTMIAKALATESKLNFISV 303
GPPG KT+IA+A+A ES NF+S+
Sbjct: 231 GPPGTGKTLIARAVANESGANFLSI 255
Score = 95.9 bits (237), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 111/224 (49%), Gaps = 6/224 (2%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G L+YG G GKT L ++A+ + + I+ ++ SK+ GE+E ++ F A
Sbjct: 497 GIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKA 556
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQE---RRLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
AP+++ LD +D + R + R+++ L+T +D + E+ VV++ T D
Sbjct: 557 KQVAPAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGI-EVMNGVVVIGATNRPD 615
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGD 185
+D +L GR D+ I +P P ++ R +IL +P + D + +A T G+VG D
Sbjct: 616 IMDPALLRAGRFDKLIYIPPPDKEARLSILKVHTKNMPLAPDVD-LNDIAQRTEGYVGAD 674
Query: 186 LATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVL 229
L L A E V S + AL ++PS +V+
Sbjct: 675 LENLCREAGMNAYRENPDATSV-SQKNFLDALKTIRPSVDEEVI 717
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 228 bits (580), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 121/318 (38%), Positives = 188/318 (59%), Gaps = 20/318 (6%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
Q G+ GIL+YG GTGKT L +LA+ + + + + ++ SKFYGE+E R++
Sbjct: 238 FQRLGIDPPKGILLYGPPGTGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREI 297
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F A ++APS++ +D +D + R + E+R+++ L+T +D + + V+++ T
Sbjct: 298 FKEAEENAPSIIFIDEIDAIAPKREDVTGEVEKRVVAQLLTLMDGIKG-RGRVIVIGATN 356
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +LR PGR D+EIE+ P R IL +P + D + ++A +T+G+
Sbjct: 357 RPDAIDPALRRPGRFDREIEIRPPDTKGRKDILQVHTRNMPITDDVD-LDKLAEMTYGYT 415
Query: 183 GGDLATLLSNATSALL---------------VETEGTGQV-LSYDGVMRALDHVKPSAMR 226
G DLA L A L + E ++ +S + + AL ++PS +R
Sbjct: 416 GADLAALAKEAAIYALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPSLLR 475
Query: 227 QVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
+V VEVP V W+DIGG D VK +LR++VEWPL+ PE F + G+ PP+GIL+FGPPG KT
Sbjct: 476 EVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKT 535
Query: 287 MIAKALATESKLNFISVK 304
M+AKA+ATES NFI+V+
Sbjct: 536 MLAKAVATESGANFIAVR 553
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 59/85 (69%)
Query: 219 HVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMF 278
++ +++ + P V W DIG +E K K+R+ VEWP++HPE F RLGI PP+GIL++
Sbjct: 193 EIREEPVKESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLY 252
Query: 279 GPPGCSKTMIAKALATESKLNFISV 303
GPPG KT++A+ALA E FI+V
Sbjct: 253 GPPGTGKTLLARALANEIGAYFITV 277
Score = 91.7 bits (226), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 100/191 (52%), Gaps = 7/191 (3%)
Query: 8 NGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDA 67
+G+ GIL++G GTGKT L ++A+ + + ++ ++ SK+ GE+E ++ F
Sbjct: 516 SGVTPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRK 575
Query: 68 ALDHAPSLLLLDNLDVLCTGRNRSDQE---RRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
A AP+++ D +D + R S R+++ L+ ++D + L VV++A T
Sbjct: 576 ARQAAPTVIFFDEIDSIAPIRGLSTDSGVTERIVNQLLAEMDGIVPLNK-VVIIAATNRP 634
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVG 183
D +D +L PGR D+ I +P P + R IL VP L+ D ++ +A G+ G
Sbjct: 635 DILDPALLRPGRFDRLIYVPPPDKTARFEILKVHTKNVP--LAEDVSLEDIAEKAEGYTG 692
Query: 184 GDLATLLSNAT 194
DL L+ AT
Sbjct: 693 ADLEALVREAT 703
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 120/313 (38%), Positives = 186/313 (59%), Gaps = 14/313 (4%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
S G+ GIL++G GTGKT L+ +A+ H + I + SK+ GE E L+
Sbjct: 271 FSSFGVSPPRGILLHGPPGTGKTMLLRVVANTSNAHVLTINGPSIVSKYLGETEAALRDI 330
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQ---ERRLLSCLVTQVDRLHELQACVVLLAVT 121
F+ A + PS++ +D +D + R D E R+++ L+T +D + VV++A T
Sbjct: 331 FNEARKYQPSIIFIDEIDSIAPNRANDDSGEVESRVVATLLTLMDGMGA-AGKVVVIAAT 389
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVP---HSLSTDQIQQVAFIT 178
++VD +LR PGR DQE+E+ +P D R IL +++ H L ++ I+ +A T
Sbjct: 390 NRPNSVDPALRRPGRFDQEVEIGIPDVDARFDILTKQFSRMSSDRHVLDSEAIKYIASKT 449
Query: 179 HGFVGGDLATLLSNATSALLVETEGTGQVL-------SYDGVMRALDHVKPSAMRQVLVE 231
HG+VG DL L + + GT + + V A+ ++PSAMR++ +E
Sbjct: 450 HGYVGADLTALCRESVMKTIQRGLGTDANIDKFSLKVTLKDVESAMVDIRPSAMREIFLE 509
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+P V WSDIGGQ+E+K K+++ ++ PL+ E FARLGI P+G+L++GPPGCSKT+ AKA
Sbjct: 510 MPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKA 569
Query: 292 LATESKLNFISVK 304
LATES +NF++VK
Sbjct: 570 LATESGINFLAVK 582
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 3/194 (1%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+L+YG G KT +LA+ ++ + ++ ++F+K+ GE+E ++ F A
Sbjct: 546 GISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKA 605
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
APS++ D +D L R+ S +L+ L+ ++D + EL+ VV++A T D
Sbjct: 606 RSAAPSIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKG-VVIVAATNRPDE 664
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +L PGRLD+ I + P + R IL K S + ++A T G+ G ++
Sbjct: 665 IDAALLRPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEV 724
Query: 187 ATLLSNATSALLVE 200
L A A ++E
Sbjct: 725 VLLCQEAGLAAIME 738
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
+ ++ +GG D+ L+ ++E PL P F+ G+ PPRGIL+ GPPG KTM+ + +A
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
Query: 295 ESKLNFISV 303
S + +++
Sbjct: 302 TSNAHVLTI 310
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 123/317 (38%), Positives = 186/317 (58%), Gaps = 20/317 (6%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
Q G++ G+L++G GTGKT L ++A+ I ++ SK+YGE+E +L+
Sbjct: 215 FQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPEIISKYYGESEQQLREI 274
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A D +PS++ +D LD + R + ERR+++ L+T +D L E + V+++A T
Sbjct: 275 FEDAKDDSPSIIFIDELDSIAPKREDVTGEVERRVVAQLLTMMDGL-EGRGQVIVIAATN 333
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGF 181
+D VD +LR PGR D+EIE+ VP R IL +P LS D + +A THGF
Sbjct: 334 RVDAVDPALRRPGRFDREIEIGVPDEIGREEILKIHTRGMP--LSDDVNLSTLADDTHGF 391
Query: 182 VGGDLATLLSNATSALL--------VETEGTG------QVLSYDGVMRALDHVKPSAMRQ 227
VG D+ +L A L ++ E ++ + AL V+PSAMR+
Sbjct: 392 VGADIESLSKEAAMRALRRYLPEIDLDEEDIPPSLIDRMIVKREDFKGALSEVEPSAMRE 451
Query: 228 VLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
VLVE+P + W D+GG E K +++SVEWPL PE F R+G++PP G+L++GPPG KT+
Sbjct: 452 VLVELPKITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTL 511
Query: 288 IAKALATESKLNFISVK 304
+AKA+A E+ NFISV+
Sbjct: 512 MAKAVANETNANFISVR 528
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 116/219 (52%), Gaps = 8/219 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+L+YG GTGKT + ++A+ + + ++ + SK+ GE+E ++ F A
Sbjct: 492 GVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTFRKA 551
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS---DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLD 125
AP+++ D LD L GR ++ + R+++ L+T++D L E++ V+++A T D
Sbjct: 552 RQVAPTVIFFDELDSLAPGRGQTGGNNVSERVVNQLLTELDGLEEMEE-VMVIAATNRPD 610
Query: 126 NVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGFVGG 184
+D +L GR D+ +++ P + R IL P L+ D ++++A G+VG
Sbjct: 611 IIDPALIRSGRFDRLVQVGQPGIEGREQILKIHTQDTP--LAADVSLRELAERADGYVGS 668
Query: 185 DLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPS 223
DLA + A L + E V A+++V+P+
Sbjct: 669 DLANIAREAAIEALRDDEDADDV-GMAHFRAAMENVRPT 706
Score = 80.1 bits (196), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 51/69 (73%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
+ + DIGG + ++R+ VE P+KHP+ F +LGI+PP+G+L+ GPPG KT++AKA+A
Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245
Query: 295 ESKLNFISV 303
E+ +F S+
Sbjct: 246 ETSASFFSI 254
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 215 bits (548), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/314 (36%), Positives = 188/314 (59%), Gaps = 22/314 (7%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 238 GVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEA 297
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
++P+++ +D +D L R +S + ERR++S L+T +D + + ++ V++L T ++
Sbjct: 298 EKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQLLTLMDGM-KARSNVIVLGATNRPNS 356
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+EIE+ VP R IL + S D + + HGF G DL
Sbjct: 357 IDPALRRYGRFDREIEIGVPDETGRLEILRIHTKNMKMSEDVDLVA-INKELHGFTGSDL 415
Query: 187 ATLLSNATSALLVETEGTGQV----------------LSYDGVMRALDHVKPSAMRQVLV 230
A+L S A AL E Q+ ++ + A++H PS++R+ ++
Sbjct: 416 ASLCSEA--ALQQIREKLPQIDLDSEKIDAKVLASLKVNSENFRYAIEHTDPSSLRETVI 473
Query: 231 EVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
+ PNVKWSDIGG ++VK +LR++V++P+++PE F + G+ P +G+L +GPPGC KT++AK
Sbjct: 474 QSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAK 533
Query: 291 ALATESKLNFISVK 304
A+ATE K NFIS+K
Sbjct: 534 AVATECKANFISIK 547
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 6/197 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ K + + I+ ++ S + GE+E ++ F A
Sbjct: 511 GMTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARA 570
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSL 124
AP +L D +D + R+ +D R+L+ L++++D +++ + V ++ T
Sbjct: 571 RGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQ-KKNVFVIGATNRP 629
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGRLDQ + +P+P D R +IL L K P S D ++Q+A T F G
Sbjct: 630 DQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEID-LRQLAEATDKFSGA 688
Query: 185 DLATLLSNATSALLVET 201
DL+ + A + ET
Sbjct: 689 DLSEICQRACKLAIRET 705
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%)
Query: 227 QVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
+V E V + D+GG K+R+ VE PL+H + ++++G+KPP+GIL++GPPG KT
Sbjct: 197 EVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKT 256
Query: 287 MIAKALATES 296
+IA+A+A E+
Sbjct: 257 LIARAIANET 266
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 188/316 (59%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ A
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A +APS++ +D +D + R ++ + ERR++S L+T +D L +A V+++ T
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS-RAHVIVMGATN 352
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + + D +++V+ THG+V
Sbjct: 353 RPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVD-LERVSKDTHGYV 411
Query: 183 GGDLATLLSNATSALLVET---------EGTGQVL-----SYDGVMRALDHVKPSAMRQV 228
G DLA L + A + E E ++L S D AL + PSA+R+
Sbjct: 412 GADLAALCTEAALQCIREKMDVIDLDDEEIDAEILNSMAVSNDHFQTALGNSNPSALRET 471
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFIS+K
Sbjct: 532 AKAIANECQANFISIK 547
Score = 103 bits (256), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 7/202 (3%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+ GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREI 566
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRS-----DQERRLLSCLVTQVDRLHELQACVVLLA 119
FD A AP +L D LD + T R S R+L+ L+T++D ++ + V ++
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMN-AKKTVFIIG 625
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLDQ I +P+P + R I L K P + D ++ +A T
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVD-LRALAKYTQ 684
Query: 180 GFVGGDLATLLSNATSALLVET 201
GF G D+ + + + E
Sbjct: 685 GFSGADITEICQRSCKYAIREN 706
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 265 ETGAFFFCI 273
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 213 bits (543), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 186/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + + D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PN+ W DIGG D+VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 99.8 bits (247), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 103/198 (52%), Gaps = 7/198 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNVGDGGGAADRVINQILTEMDGMSS-KKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P S D + +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPISKDVD-LDFLAKMTNGFSG 684
Query: 184 GDLATLLSNATSALLVET 201
DL + A + E+
Sbjct: 685 ADLTEICQRACKLAIRES 702
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 188/316 (59%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ A
Sbjct: 250 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 309
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A ++P+++ +D +D + R +++ E RR++S L+T +D + + ++ VV++A T
Sbjct: 310 FEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGM-KARSNVVVMAATN 368
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+E+++ +P R IL + + D ++Q+A THG+V
Sbjct: 369 RPNSIDPALRRFGRFDREVDVGIPDPTGRLEILRIHTKNMKLADDVD-LEQIAAETHGYV 427
Query: 183 GGDLATLLSNATSAL---------LVETEGTGQVL-----SYDGVMRALDHVKPSAMRQV 228
G DLA+L S A L E E +VL + D AL PSA+R+
Sbjct: 428 GSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDNFRFALGSSNPSALRET 487
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV+W DIGG +EVK +LR++V+ P+ + E F R G+ P +G+L FGPPG KT++
Sbjct: 488 VVEVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
Query: 289 AKALATESKLNFISVK 304
AKA+A E NFISVK
Sbjct: 548 AKAIANECSANFISVK 563
Score = 100 bits (250), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 102/189 (53%), Gaps = 6/189 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+L +G GTGKT L ++A+ + + ++ ++ S ++GE+E ++ FD A
Sbjct: 527 GVTPSKGVLFFGPPGTGKTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKA 586
Query: 69 LDHAPSLLLLDNLDVLCTGR----NRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
AP ++ LD LD + R S R+++ L+T++D ++ + V ++ T
Sbjct: 587 RAAAPCVVFLDELDSIAKARGASAGDSGGGDRVVNQLLTEMDGVNS-KKNVFVIGATNRP 645
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGG 184
D +D +L PGRLDQ I +P+P + R +IL L P + D ++ VA THGF G
Sbjct: 646 DQIDPALMRPGRLDQLIYVPLPDEEARFSILQTQLRHTPVAEDVD-LRAVAKATHGFSGA 704
Query: 185 DLATLLSNA 193
DL ++ A
Sbjct: 705 DLEFVVQRA 713
Score = 79.7 bits (195), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG ++R+ VE PL+HP+ F +GIKPPRGILM+GPPG KT++A+A+A
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 295 ESKLNFI 301
E+ F
Sbjct: 281 ETGAFFF 287
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 185/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + S D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 104/198 (52%), Gaps = 7/198 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + ++ V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-IKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRMAILKANLRKSPVAKDVD-VDFLAKMTNGFSG 684
Query: 184 GDLATLLSNATSALLVET 201
DL + A + E+
Sbjct: 685 ADLTEICQRACKLAIRES 702
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 211 bits (536), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 185/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + S D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDSTGRLEILQIHTKNMKLSDDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 98.6 bits (244), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 103/198 (52%), Gaps = 7/198 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRIAILKANLRKSPVAKDVD-LDFLAKMTNGFSG 684
Query: 184 GDLATLLSNATSALLVET 201
DL + A + E+
Sbjct: 685 ADLTEICQRACKLAIRES 702
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 211 bits (536), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 185/316 (58%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ A
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 292
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A +APS++ +D +D + R +++ E RR++S L+T +D L +A V+++ T
Sbjct: 293 FEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKS-RAHVIVMGATN 351
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + + D +++++ THG+V
Sbjct: 352 RPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVD-LERISKDTHGYV 410
Query: 183 GGDLATLLSNATSALLVETEG--------------TGQVLSYDGVMRALDHVKPSAMRQV 228
G DLA L + A + E +S + AL + PSA+R+
Sbjct: 411 GADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVSNEHFHTALGNSNPSALRET 470
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 471 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFISVK
Sbjct: 531 AKAIANECQANFISVK 546
Score = 106 bits (264), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 128/269 (47%), Gaps = 17/269 (6%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+ GM G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 565
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQE-----RRLLSCLVTQVDRLHELQACVVLLA 119
FD A AP +L D LD + T R S + R+L+ L+T++D ++ + V ++
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMDGMN-AKKTVFIIG 624
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLDQ I +P+P D R I L K P + D + +A T
Sbjct: 625 ATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKACLRKSPVAKDVD-VTALAKYTQ 683
Query: 180 GFVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLV--EVPNVKW 237
GF G D+ + A + E + D P AM + +V EV ++
Sbjct: 684 GFSGADITEICQRACKYAIREN------IEKDIENERRRSQNPEAMEEDMVDDEVSEIRA 737
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
+ ++ +K R + ++ +AFA+
Sbjct: 738 AHF--EESMKYARRSVSDADIRKYQAFAQ 764
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 204 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 263
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 264 ETGAFFFCI 272
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 210 bits (535), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/316 (37%), Positives = 188/316 (59%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ A
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A +APS++ +D +D + R ++ + ERR++S L+T +D L +A V+++ T
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS-RAHVIVIGATN 352
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + S D ++++A THG+V
Sbjct: 353 RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVD-LERIAKDTHGYV 411
Query: 183 GGDLATLLSNAT--------SALLVETEG-TGQVLSYDGVMR-----ALDHVKPSAMRQV 228
G DLA L + A + +E E +VL+ V AL PSA+R+
Sbjct: 412 GADLAALCTEAALQCIREKMDVIDLEDETIDAEVLNSMAVTNEHFQTALGTSNPSALRET 471
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFISVK
Sbjct: 532 AKAIANECQANFISVK 547
Score = 105 bits (261), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 127/269 (47%), Gaps = 17/269 (6%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+ GM G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRS-----DQERRLLSCLVTQVDRLHELQACVVLLA 119
FD A AP +L D LD + T R S R+L+ L+T++D + + V ++
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMS-AKKTVFIIG 625
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLDQ I +P+P D R I L K P + + D ++ +A T
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVD-LRALARHTQ 684
Query: 180 GFVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLV--EVPNVKW 237
GF G D+ + A + E + D P AM + V EV +K
Sbjct: 685 GFSGADITEICQRACKYAIREN------IEKDIERERKSRENPEAMDEDTVDDEVAEIKA 738
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
+ ++ +K R + ++ +AFA+
Sbjct: 739 AHF--EESMKFARRSVSDADIRKYQAFAQ 765
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 265 ETGAFFFCI 273
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 210 bits (535), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 188/316 (59%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ A
Sbjct: 233 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 292
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A +APS++ +D +D + R +++ E RR++S L+T +D L +A V+++ T
Sbjct: 293 FEEAEKNAPSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKS-RAHVIVMGATN 351
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + + D +++++ THG+V
Sbjct: 352 RPNSIDPALRRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVD-LERISKDTHGYV 410
Query: 183 GGDLATLLSNATSALLVETEGT---------GQVLSYDGVMR-----ALDHVKPSAMRQV 228
G DLA L + A + E ++L+ V AL + PSA+R+
Sbjct: 411 GADLAALCTEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRET 470
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W+DIGG + VK +L+++V++P++HPE F + G+ P +G+L +GPPGC KT++
Sbjct: 471 VVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLL 530
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFISVK
Sbjct: 531 AKAIANECQANFISVK 546
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 17/269 (6%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+ GM G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 565
Query: 65 FDAALDHAPSLLLLDNLDVLCTGR------NRSDQERRLLSCLVTQVDRLHELQACVVLL 118
FD A AP +L D LD + T R + R+L+ L+T++D ++ + V ++
Sbjct: 566 FDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMN-AKKTVFII 624
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D +L PGRLDQ I +P+P D R I L K P + D I +A T
Sbjct: 625 GATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALRKSPIAKDVD-IGALAKYT 683
Query: 179 HGFVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLV-EVPNVKW 237
GF G D+ + A + E + D P AM + V EV +K
Sbjct: 684 QGFSGADITEICQRACKYAIREN------IEKDIEKEKRRSENPEAMEEDGVDEVSEIKA 737
Query: 238 SDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
+ ++ +K R + ++ +AFA+
Sbjct: 738 AHF--EESMKYARRSVSDADIRKYQAFAQ 764
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
+V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 203 DVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVA 262
Query: 294 TESKLNFISV 303
E+ F +
Sbjct: 263 NETGAFFFCI 272
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 185/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + + D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GDLATLLSNA 193
DL + A
Sbjct: 685 ADLTEICQRA 694
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 185/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + + D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GDLATLLSNA 193
DL + A
Sbjct: 685 ADLTEICQRA 694
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 209 bits (533), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 185/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + + D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GDLATLLSNA 193
DL + A
Sbjct: 685 ADLTEICQRA 694
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 209 bits (532), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 185/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + + D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L++ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GDLATLLSNA 193
DL + A
Sbjct: 685 ADLTEICQRA 694
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 209 bits (531), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 122/317 (38%), Positives = 189/317 (59%), Gaps = 19/317 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ A
Sbjct: 251 FKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKA 310
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A ++P+++ +D +D + R +++ E RR++S L+T +D + + ++ VV++A T
Sbjct: 311 FEEAEKNSPAIIFIDEIDSIAPKREKTNGEVERRVVSQLLTLMDGM-KARSNVVVMAATN 369
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+E+++ +P R IL + D ++ +A THG+V
Sbjct: 370 RPNSIDPALRRFGRFDREVDIGIPDPTGRLEILSIHTKNMKLGEDVD-LETIAAETHGYV 428
Query: 183 GGDLATLLSNATSALLVET-------EGT--GQVLSYDGVM-----RALDHVKPSAMRQV 228
G DLA+L S A + E E T +VL GV AL PSA+R+V
Sbjct: 429 GSDLASLCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENFRYALGVSNPSALREV 488
Query: 229 -LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTM 287
+VEVPNV+W DIGG +EVK +L +SV++P+ HPE F + G+ P RG+L +GPPG KTM
Sbjct: 489 AVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTM 548
Query: 288 IAKALATESKLNFISVK 304
+AKA+A E NFISVK
Sbjct: 549 LAKAVANECAANFISVK 565
Score = 101 bits (252), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 103/202 (50%), Gaps = 7/202 (3%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
Q G+ G+L YG GTGKT L ++A+ + + ++ ++ S ++GE+E ++
Sbjct: 525 FQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDI 584
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRS-----DQERRLLSCLVTQVDRLHELQACVVLLA 119
FD A AP ++ LD LD + R S R+++ L+T++D + + V ++
Sbjct: 585 FDKARAAAPCVVFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTS-KKNVFVIG 643
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T + +D +L PGRLD + +P+P + R IL L K P + D I+ +A TH
Sbjct: 644 ATNRPEQLDAALVRPGRLDTLVYVPLPDQASREGILKAQLRKTPVASDVD-IEFIASKTH 702
Query: 180 GFVGGDLATLLSNATSALLVET 201
GF G DL + A + E+
Sbjct: 703 GFSGADLGFVTQRAVKLAIKES 724
Score = 79.7 bits (195), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPPRGILM+GPPG KT++A+A+A
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 295 ESKLNFI 301
E+ F
Sbjct: 282 ETGAFFF 288
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 115/312 (36%), Positives = 184/312 (58%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 293
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D LD + R ++ + ERR++S L+T +D L + +A V+++A T ++
Sbjct: 294 EKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQ-RAHVIVMAATNRPNS 352
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R IL + + D ++QVA THG VG DL
Sbjct: 353 IDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVD-LEQVANETHGHVGADL 411
Query: 187 ATLLSNAT------SALLVETEG--------TGQVLSYDGVMRALDHVKPSAMRQVLVEV 232
A L S A L++ E ++ D AL PSA+R+ +VEV
Sbjct: 412 AALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEV 471
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
P V W DIGG ++VK +L+ V++P++HP+ F + G+ P +G+L +GPPGC KT++AKA+
Sbjct: 472 PQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAI 531
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 532 ANECQANFISIK 543
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 101/190 (53%), Gaps = 7/190 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 507 GMTPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKA 566
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER-----RLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R + + R+++ ++T++D + + V ++ T
Sbjct: 567 RQAAPCVLFFDELDSIAKARGGNIGDGGGAADRVINQILTEMDGMS-TKKNVFIIGATNR 625
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D ++ +A +T+GF G
Sbjct: 626 PDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKANLRKSPVAKDVD-LEFLAKMTNGFSG 684
Query: 184 GDLATLLSNA 193
DL + A
Sbjct: 685 ADLTEICQRA 694
Score = 75.5 bits (184), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGIL++GPPG KT+IA+A+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 260
Query: 295 ESKLNFI 301
E+ F
Sbjct: 261 ETGAFFF 267
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 204 bits (519), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 187/312 (59%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K G+L+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 244 GIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA 303
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+AP+++ +D +D + R++++ E RR++S L+T +D + + ++ VV++A T ++
Sbjct: 304 EKNAPAIIFIDEIDSIAPKRDKTNGEVERRVVSQLLTLMDGM-KARSNVVVIAATNRPNS 362
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+E+++ +P R +L + + D ++ +A THG+VG D+
Sbjct: 363 IDPALRRFGRFDREVDIGIPDATGRLEVLRIHTKNMKLADDVD-LEALAAETHGYVGADI 421
Query: 187 ATLLSNATSAL---------LVETEGTGQVL-----SYDGVMRALDHVKPSAMRQVLVEV 232
A+L S A L E E +VL + D AL + PSA+R+ +VE
Sbjct: 422 ASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVTMDNFRFALGNSNPSALRETVVES 481
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
NV W D+GG DE+K +L+++VE+P+ HP+ + + G+ P +G+L +GPPG KT++AKA+
Sbjct: 482 VNVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAV 541
Query: 293 ATESKLNFISVK 304
ATE NFISVK
Sbjct: 542 ATEVSANFISVK 553
Score = 105 bits (263), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 124/242 (51%), Gaps = 21/242 (8%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+L YG GTGKT L ++A+ + + + ++ ++ S +YGE+E ++ FD A
Sbjct: 517 GLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKA 576
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS-----DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP+++ LD LD + R S R+++ L+T++D ++ + V ++ T
Sbjct: 577 RAAAPTVVFLDELDSIAKARGGSLGDAGGASDRVVNQLLTEMDGMN-AKKNVFVIGATNR 635
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P + R +IL+ L K P ++ +A T GF G
Sbjct: 636 PDQIDPAILRPGRLDQLIYVPLPDENARLSILNAQLRKTPLEPGL-ELTAIAKATQGFSG 694
Query: 184 GDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQ 243
DL ++ A + ++ + A H + A ++V VE +V+ +D G +
Sbjct: 695 ADLLYIVQRAAKYAIKDS------------IEA--HRQHEAEKEVKVEGEDVEMTDEGAK 740
Query: 244 DE 245
E
Sbjct: 741 AE 742
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++R+ VE PL+HP+ F +GIKPPRG+LM+GPPG KT++A+A+A
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 295 ESKLNFI 301
E+ F
Sbjct: 271 ETGAFFF 277
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 204 bits (519), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 114/316 (36%), Positives = 185/316 (58%), Gaps = 18/316 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+S G+K GIL+YG G+GKT + ++A+ I ++ SK GE+E L+ A
Sbjct: 234 FKSIGVKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKA 293
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F+ A +APS++ +D +D + R ++ + ERR++S L+T +D L +A V+++ T
Sbjct: 294 FEEAEKNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKS-RAHVIVMGATN 352
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+++D +LR GR D+EI++ VP R +L + + D +++++ THG+V
Sbjct: 353 RPNSIDPALRRFGRFDREIDIGVPDEVGRLEVLGIHTKNMKLAEEVD-LERISKDTHGYV 411
Query: 183 GGDLATLLSNATSALLVETEGT---------GQVLSYDGVMR-----ALDHVKPSAMRQV 228
G DLA L + A + E +VL+ V AL PSA+R+
Sbjct: 412 GADLAALCTEAALQCIREKMDVLDLEDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRET 471
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
+VEVPNV W DIGG + VK +L+++V++P++ PE F + G+ P +G+L +GPPGC KT++
Sbjct: 472 VVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLL 531
Query: 289 AKALATESKLNFISVK 304
AKA+A E + NFISVK
Sbjct: 532 AKAIANECQANFISVK 547
Score = 111 bits (278), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 129/267 (48%), Gaps = 15/267 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
+ GM G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREI 566
Query: 65 FDAALDHAPSLLLLDNLDVLCTGRNRSDQE-----RRLLSCLVTQVDRLHELQACVVLLA 119
FD A AP +L D LD + T R S + R+L+ L+T++D ++ + V ++
Sbjct: 567 FDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMN-AKKTVFIIG 625
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGRLDQ I +P+P D R I L K P S D ++ +A T
Sbjct: 626 ATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDID-LRALAKHTQ 684
Query: 180 GFVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSD 239
GF G D+ + A + E + D P +M + + EVP +K +
Sbjct: 685 GFSGADVTEICQRACKYAIREN------IEKDIEREKRRQENPDSMDEDVDEVPEIKPAH 738
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFAR 266
++ +K R + ++ +AFA+
Sbjct: 739 F--EESMKYARRSVSDADIRKYQAFAQ 763
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 49/69 (71%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + D+GG + ++R+ VE PL+HP+ F +G+KPP+GIL++GPPG KT+IA+A+A
Sbjct: 205 VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVAN 264
Query: 295 ESKLNFISV 303
E+ F +
Sbjct: 265 ETGAFFFCI 273
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 202 bits (515), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 110/312 (35%), Positives = 188/312 (60%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL+YG GTGKT + ++A+ +I ++ SK GE+E L+ AF+ A
Sbjct: 231 GVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 290
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
++P+++ +D +D + R+++ + ERR++S L+T +D + + + ++++A T ++
Sbjct: 291 EKNSPAIIFIDEIDAIAPKRDKTHGEVERRIVSQLLTLMDGMKK-SSHLIVMAATNRPNS 349
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+EI++ +P R +L + D ++Q+A +HG VG DL
Sbjct: 350 IDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVD-LEQIAAESHGHVGADL 408
Query: 187 ATLLSNAT------SALLVETEGT---GQVL-----SYDGVMRALDHVKPSAMRQVLVEV 232
A+L S A L++ E +VL + + A+ PSA+R+ +VEV
Sbjct: 409 ASLCSEAALQQIREKMDLIDLEDDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVEV 468
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PN W+DIGG + VK +L++ V++P++HP+ F + G++P RG+L +GPPGC KT++AKA+
Sbjct: 469 PNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAI 528
Query: 293 ATESKLNFISVK 304
A E + NFISVK
Sbjct: 529 ANECQANFISVK 540
Score = 99.4 bits (246), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM+ G+L YG G GKT L ++A+ + + + ++ ++ + ++GE+E ++ FD A
Sbjct: 504 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKA 563
Query: 69 LDHAPSLLLLDNLDVLCTGR--NRSD---QERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R N D R+++ ++T++D + + V ++ T
Sbjct: 564 RSAAPCVLFFDELDSIAKARGGNVGDAGGAADRVINQILTEMDGMG-AKKNVFIIGATNR 622
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R AIL L K P + D + +A +T GF G
Sbjct: 623 PDIIDPAILRPGRLDQLIYIPLPDDKSREAILKANLRKSPLAKEVD-LTYIAKVTQGFSG 681
Query: 184 GDLATLLSNA 193
DL + A
Sbjct: 682 ADLTEICQRA 691
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V + DIGG + ++++ VE PL+HP F +G+KPPRGILM+GPPG KT+IA+A+A
Sbjct: 198 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVAN 257
Query: 295 ESKLNFI 301
E+ F
Sbjct: 258 ETGAFFF 264
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 114/312 (36%), Positives = 184/312 (58%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL++G GTGKT + ++A+ +I ++ SK GE+E L+ AF
Sbjct: 239 GVKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC 298
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
++P++L +D +D + R ++ + E+R++S L+T +D L + +A VV++A T ++
Sbjct: 299 EKNSPAILFIDEIDAIAPKREKAHGEVEKRIVSQLLTLMDGL-KTRAHVVVIAATNRPNS 357
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+EI++ +P R IL + D ++QVA HGFVG DL
Sbjct: 358 IDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLGEDVD-LEQVANECHGFVGADL 416
Query: 187 ATLLSNAT------SALLVETEGT---GQVL-----SYDGVMRALDHVKPSAMRQVLVEV 232
A+L S A L++ E +VL + + A+ PSA+R+ +VE
Sbjct: 417 ASLCSEAAIQQIREKMELIDLEDDTIDAEVLNSLAVTMENFRFAMGKSSPSALREAVVET 476
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PN WSDIGG VK +L++ V++P++HPE + + G++P RG+L +GPPGC KT++AKA+
Sbjct: 477 PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAI 536
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 537 ANECQANFISIK 548
Score = 94.7 bits (234), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 7/198 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 512 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 571
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS-----DQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
AP +L D LD + R S R+++ ++T++D ++ + V ++ T
Sbjct: 572 RAAAPCVLFFDELDSIAKARGGSVGDAGGAADRVINQVLTEMDGMN-AKKNVFIIGATNR 630
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D ++ PGRLDQ I +P+P R I L K P S D + +A T GF G
Sbjct: 631 PDIIDPAVLRPGRLDQLIYIPLPDEASRLQIFKASLRKTPLSADLD-LNFLAKNTVGFSG 689
Query: 184 GDLATLLSNATSALLVET 201
DL + A + E+
Sbjct: 690 ADLTEICQRACKLAIRES 707
Score = 77.8 bits (190), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 8/95 (8%)
Query: 207 VLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFAR 266
V+ Y+G D +K + L EV + D+GG + ++++ VE PL+HP+ F
Sbjct: 186 VIHYEG-----DPIKREEEEEALNEV---GYDDLGGVRKQLAQIKEMVELPLRHPQLFKA 237
Query: 267 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFI 301
+G+KPPRGIL+FGPPG KT+IA+A+A E+ F
Sbjct: 238 IGVKPPRGILLFGPPGTGKTLIARAVANETGAFFF 272
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 197 bits (502), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 183/312 (58%), Gaps = 18/312 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K GIL++G GTGKT + ++A+ +I ++ SK GE+E L+ AF+
Sbjct: 240 GIKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC 299
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+ P++L +D +D + R +++ E RR++S L+T +D + ++ +V++A T ++
Sbjct: 300 EKNQPAILFIDEIDAIAPKREKTNGEVERRIVSQLLTLMDGVKG-RSNLVVIAATNRPNS 358
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
+D +LR GR D+EI++ +P R IL + + D ++Q+A HGFVG DL
Sbjct: 359 IDGALRRFGRFDREIDIGIPDAVGRLEILRIHTKNMKLADDVD-LEQIANECHGFVGADL 417
Query: 187 ATLLSNAT------SALLVETEGT---GQVL-----SYDGVMRALDHVKPSAMRQVLVEV 232
A+L S A L++ E +VL + + A PSA+R+ +VE
Sbjct: 418 ASLCSEAALQQIREKMELIDLEDDQIDAEVLNSLAVTMENFRFAQGKSSPSALREAVVET 477
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PN WSDIGG VK +L++ V++P++HPE + + G++P RG+L +GPPGC KT++AKA+
Sbjct: 478 PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAI 537
Query: 293 ATESKLNFISVK 304
A E + NFIS+K
Sbjct: 538 ANECQANFISIK 549
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 100/199 (50%), Gaps = 8/199 (4%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
GM+ G+L YG G GKT L ++A+ + + + I+ ++ + ++GE+E ++ FD A
Sbjct: 513 GMQPSRGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKA 572
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER------RLLSCLVTQVDRLHELQACVVLLAVTT 122
AP +L D LD + R R+++ ++T++D ++ + V ++ T
Sbjct: 573 RAAAPCVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMN-AKKNVFIIGATN 631
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D ++ PGRLDQ I +P+P R IL L K P S D + +A T GF
Sbjct: 632 RPDIIDPAVLRPGRLDQLIYIPLPDEASRHQILKASLRKTPLSKDLD-LTFLAKNTVGFS 690
Query: 183 GGDLATLLSNATSALLVET 201
G DL + A + E+
Sbjct: 691 GADLTEICQRACKLAIRES 709
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + D+GG + ++++ VE PL+HP+ F +GIKPPRGIL+FGPPG KT+IA+A+A
Sbjct: 206 DIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA 265
Query: 294 TES 296
E+
Sbjct: 266 NET 268
>sp|Q0VA52|SPA5L_XENTR Spermatogenesis-associated protein 5-like protein 1 OS=Xenopus
tropicalis GN=spata5l1 PE=2 SV=1
Length = 593
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 174/304 (57%), Gaps = 11/304 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+L+ G G GKT L+ ++A + + + + + GE+E L+ F+ A
Sbjct: 221 GLPCPKGVLLIGPPGVGKTLLVKAVAREVGAYVIGLSGPAIHGSRPGESEENLRKIFEKA 280
Query: 69 LDHA---PSLLLLDNLDVLCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
+ A P+LL +D +D LC R S+ E R+++ L+T +D + +V +A T+
Sbjct: 281 REAACSGPALLFIDEVDALCPKRGHSNSAPENRVVAQLLTLMDGIDSDNK-MVTVAATSR 339
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVG 183
D +D +LR PGR D+E+ + P+ QR AIL +++ +P D +A +T G+VG
Sbjct: 340 PDAIDPALRRPGRFDREVIIGTPTHKQRQAILEMMISNMPTDRDVDA-AALADVTVGYVG 398
Query: 184 GDLATLLSNAT--SALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVL--VEVPNVKWSD 239
DL L +A + L + ++S A ++PS+ R + VE V W
Sbjct: 399 ADLTALCRDAAMQAVLQASLDSLCNLVSRAHFYEAFKRIRPSSARSSIGRVEFKPVHWEH 458
Query: 240 IGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLN 299
IGG +++K KLRQS+EWP+K+PEAF+R+G+ PP+G+L++GPPGC+KT + KA+AT +
Sbjct: 459 IGGLEDIKHKLRQSIEWPMKYPEAFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCHCS 518
Query: 300 FISV 303
F S+
Sbjct: 519 FFSI 522
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 226 RQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSK 285
+ L E P +K + D+ L++ + PL +PE +LG+ P+G+L+ GPPG K
Sbjct: 182 KHKLQEAPQLK---VAAMDDTCASLKEIIHMPLHYPETMHKLGLPCPKGVLLIGPPGVGK 238
Query: 286 TMIAKALATE 295
T++ KA+A E
Sbjct: 239 TLLVKAVARE 248
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAE 58
A G+ G+L+YG G KT+L+ ++A+ I AD+FS + G++E
Sbjct: 482 AFSRMGLTPPKGVLLYGPPGCAKTTLVKAVATSCHCSFFSISAADLFSPYVGDSE 536
>sp|Q9ZPR1|CD48B_ARATH Cell division control protein 48 homolog B OS=Arabidopsis thaliana
GN=CDC48B PE=2 SV=1
Length = 603
Score = 191 bits (485), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 176/310 (56%), Gaps = 11/310 (3%)
Query: 3 YALQSN--GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFR 60
Y L++ G+K G+L+YG GTGKTSL+ ++ H +V+ + GE+E
Sbjct: 44 YPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKV 103
Query: 61 LKAAFDAALDHA----PSLLLLDNLDVLCTGRN-RSDQERRLLSCLVTQVDRLHELQAC- 114
L+ AF A HA PS++ +D +DVLC R+ R +Q+ R+ S L T +D +
Sbjct: 104 LREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMDSNKPSSSAP 163
Query: 115 -VVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQ 173
VV++A T +D +D +LR GR D +E+ P+ + R IL KV S D +Q
Sbjct: 164 RVVVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLYTKKVNLDPSVD-LQA 222
Query: 174 VAFITHGFVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVP 233
+A +G+VG DL L AT + + + + S D + A V PS R + VE+P
Sbjct: 223 IAISCNGYVGADLEALCREATISASKRSSDSLILTSQDFKI-AKSVVGPSINRGITVEIP 281
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
V W D+GG ++K KL+Q+VEWP+KH AF ++GI P RGIL+ GPPGCSKT +AKA A
Sbjct: 282 KVTWDDVGGLKDLKKKLQQAVEWPIKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAA 341
Query: 294 TESKLNFISV 303
++ +F S+
Sbjct: 342 NAAQASFFSL 351
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 10/200 (5%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ GIL++G G KT+L + A+ + + A++FS + GE E L+ F A
Sbjct: 316 GISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRA 375
Query: 69 LDHAPSLLLLDNLDVLCTGR------NRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
+PS++ D DV+ R N S RLLS L+T++D L E + +++LA T
Sbjct: 376 RLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAKG-ILVLAATN 434
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFITHGF 181
+D +L PGR D + +P P + R IL + +L D ++++A T F
Sbjct: 435 RPYAIDAALMRPGRFDLVLYVPPPDLEARFEILQVHTRNM--TLGDDVDLRKIAEETDLF 492
Query: 182 VGGDLATLLSNATSALLVET 201
G +L L + + L E
Sbjct: 493 TGAELEGLCRESGTVSLREN 512
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 234 NVKW---SDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAK 290
N KW ++IGG + LR+ + +P ++P LG+K PRG+L++GPPG KT + +
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 291 ALATESKLNFI 301
A+ E + I
Sbjct: 75 AVVQECDAHLI 85
>sp|A7YSY2|SPA5L_BOVIN Spermatogenesis-associated protein 5-like protein 1 OS=Bos taurus
GN=SPATA5L1 PE=2 SV=1
Length = 767
Score = 191 bits (484), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/309 (35%), Positives = 175/309 (56%), Gaps = 11/309 (3%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
AL S G++ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 225 ALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAVSAPALQGARPGETEENVRR 284
Query: 64 AFDAALDHA---PSLLLLDNLDVLCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLL 118
F A + A P+LL LD +D LC R Q E R+++ ++T +D + E + VV++
Sbjct: 285 IFKRARELASRRPTLLFLDEVDALCPRRGGPHQAPESRVVAQVLTLLDGIGEDRE-VVVV 343
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFIT 178
T D +D +LR PGR D+E+ + P+ QR AIL + +K+P S D + +A +T
Sbjct: 344 GSTNRPDALDPALRRPGRFDREVVIGTPTLRQRKAILQVITSKMPISGQVD-LNLLAEMT 402
Query: 179 HGFVGGDLATLLSNATSALLVETEGTGQVLSYD--GVMRALDHVKPSAMRQVL--VEVPN 234
G+VG DL L A L+ +E + D + A ++PS+ R V+ ++
Sbjct: 403 VGYVGADLTALCREAAMQALLHSEKNQDNPTIDETDFLEAFKKIQPSSFRSVIGVTDIKP 462
Query: 235 VKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALAT 294
V W IGG ++VKLKL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 463 VGWEQIGGLEDVKLKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLVRALAT 522
Query: 295 ESKLNFISV 303
+ +F+SV
Sbjct: 523 SCRCSFVSV 531
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 112/249 (44%), Gaps = 35/249 (14%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ + G+L+YG G KT+L+ +LA+ + V + AD+FS F G++E L F A
Sbjct: 496 GLTQPKGVLLYGPPGCAKTTLVRALATSCRCSFVSVSGADLFSPFVGDSEKILSQVFRQA 555
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQE----RRLLSCLVTQVD------------------ 106
+ P+++ LD +D + R+ S E R+LS L+ ++D
Sbjct: 556 RANTPAIVFLDEIDSILGSRSISRTECNVQDRVLSVLLNELDGVGLKTIERRGSKSDQHG 615
Query: 107 ------RLHELQ------ACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAI 154
+ EL+ + V+++A T D +D +L PGRLD+ I +P P R +I
Sbjct: 616 KCKQLEKNEELEFQEIFNSNVIVVAATNRPDVLDDALLRPGRLDKIIYIPPPDEKGRLSI 675
Query: 155 LHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLSNATSALLVETEGTGQVLSYDGVM 214
L P +++VA T F G DL L A L E + + +
Sbjct: 676 LKVCTKNTPMGPDV-SLEKVAAETCFFSGADLGNLCKEAALLALQENGLEVTTVKQEHFL 734
Query: 215 RALDHVKPS 223
+L VKPS
Sbjct: 735 ESLKTVKPS 743
Score = 45.8 bits (107), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 260 HPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+P A A LG++ PRG+L+ GPPG KT + +A+A E+ ++V
Sbjct: 222 YPRALASLGLEVPRGVLLAGPPGVGKTQLVRAVARETGAELLAV 265
>sp|Q9BVQ7|SPA5L_HUMAN Spermatogenesis-associated protein 5-like protein 1 OS=Homo sapiens
GN=SPATA5L1 PE=1 SV=2
Length = 753
Score = 189 bits (479), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 172/307 (56%), Gaps = 9/307 (2%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
AL + G+ G+L+ G G GKT L+ ++A + + + GE E ++
Sbjct: 225 ALTALGLAVPRGVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRR 284
Query: 64 AFDAALDHA---PSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAV 120
F A + A PSLL LD +D LC R E R+++ ++T +D + VV++
Sbjct: 285 VFQRARELASRGPSLLFLDEMDALCPQRGSRAPESRVVAQVLTLLDGASGDRE-VVVVGA 343
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHG 180
T D +D +LR PGR D+E+ + P+ QR IL + +K+P S D + +A +T G
Sbjct: 344 TNRPDALDPALRRPGRFDREVVIGTPTLKQRKEILQVITSKMPISSHVD-LGLLAEMTVG 402
Query: 181 FVGGDLATLLSNATSALLVETEGT--GQVLSYDGVMRALDHVKPSAMRQV--LVEVPNVK 236
+VG DL L A L+ +E V+ + A +++PS+ R V L+++ V
Sbjct: 403 YVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGLMDIKPVD 462
Query: 237 WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
W +IGG ++VKLKL+QS+EWPLK P F R+G+ P+G+L++GPPGC+KT + +ALAT
Sbjct: 463 WEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSC 522
Query: 297 KLNFISV 303
+F+SV
Sbjct: 523 HCSFVSV 529
Score = 95.5 bits (236), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 113/238 (47%), Gaps = 25/238 (10%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ + G+L+YG G KT+L+ +LA+ V + AD+FS F G++E L F A
Sbjct: 494 GLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQA 553
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS----DQERRLLSCLVTQVDRL--------------HE 110
P++L LD +D + R+ S D + R+LS L+ ++D + E
Sbjct: 554 RASTPAILFLDEIDSILGARSASKTGCDVQERVLSVLLNELDGVGLKTIERRGSKSSQQE 613
Query: 111 LQA----CVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSL 166
Q V+++A T D +D +L PGRLD+ I +P P R +IL +P +
Sbjct: 614 FQEVFNRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPPPDHKGRLSILKVCTKTMP--I 671
Query: 167 STD-QIQQVAFITHGFVGGDLATLLSNATSALLVETEGTGQVLSYDGVMRALDHVKPS 223
D ++ +A T F G DL L + A L E + + +++L VKPS
Sbjct: 672 GPDVSLENLAAETCFFSGADLRNLCTEAALLALQENGLDATTVKQEHFLKSLKTVKPS 729
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 221 KPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGP 280
+P + Q EVP +GG E LR+ + PL++P A LG+ PRG+L+ GP
Sbjct: 189 EPPSEAQPQPEVP------LGGLSEAADSLRELLRLPLRYPRALTALGLAVPRGVLLAGP 242
Query: 281 PGCSKTMIAKALATESKLNFISV 303
PG KT + +A+A E+ ++V
Sbjct: 243 PGVGKTQLVRAVAREAGAELLAV 265
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 173/349 (49%), Gaps = 60/349 (17%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
G+L++G G GKT L H++A + + + + ++ S GE+E +L+ F+ A+ +AP
Sbjct: 300 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPC 359
Query: 75 LLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSLDNVDVS 130
++ +D +D + R D ERR+++ L+T +D L+ + A V+++ T D++D +
Sbjct: 360 IIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 419
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLL 190
LR GR D+EI L +P R IL L K+ + D +A +T GFVG DL L
Sbjct: 420 LRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFD-FCHLAHLTPGFVGADLMALC 478
Query: 191 SNATSALL------------------------VETEGTGQVLSYD---------GVMRAL 217
A + V+ E G + + G++R
Sbjct: 479 REAAMCAVNRVLMKLQEQQKKNPEMEDLPSKGVQEERLGTEPTSETQDELQRLLGLLRDQ 538
Query: 218 DHVKPSAM----------------------RQVLVEVPNVKWSDIGGQDEVKLKLRQSVE 255
D + M R+ V VPNV W+DIG ++++ +L ++
Sbjct: 539 DPLSEEQMQGLCIELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAIL 598
Query: 256 WPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
P+++P+ F LG+ P G+L+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 599 APVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVK 647
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 101/190 (53%), Gaps = 15/190 (7%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
G+L+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F A + AP
Sbjct: 617 GVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPC 676
Query: 75 LLLLDNLDVLCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVS 130
++ D +D LC RSD+E R+++ L+T++D L Q V ++A T D +D +
Sbjct: 677 VIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLEARQQ-VFIMAATNRPDIIDPA 733
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILHCLL---TKVPHSLSTD-QIQQVA--FITHGFVGG 184
+ PGRLD+ + + +P R AIL + TK P L D ++ +A + G
Sbjct: 734 ILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPP--LDADVNLEAIAGDLRCDCYTGA 791
Query: 185 DLATLLSNAT 194
DL+ L+ A+
Sbjct: 792 DLSALVREAS 801
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 211 DGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIK 270
DG + A+ K A R + ++ NVK+ D+GG D + LK + ++HPE + LG+
Sbjct: 239 DGEIEAVLQKKAKA-RGLEFQISNVKFEDVGGND-MTLKEVCKMLIHMRHPEVYHHLGVV 296
Query: 271 PPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 297 PPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 329
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 174/351 (49%), Gaps = 64/351 (18%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
G+L++G G GKT L H++A + + + + ++ S GE+E +L+ FD A+ +AP
Sbjct: 299 GVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPC 358
Query: 75 LLLLDNLDVLCTGRN--RSDQERRLLSCLVTQVDRLHELQAC--VVLLAVTTSLDNVDVS 130
++ +D +D + R D ERR+++ L+T +D L+ + A V+++ T D++D +
Sbjct: 359 IVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPA 418
Query: 131 LRTPGRLDQEIELPVPSRDQRAAILH--CLLTKVPHSLSTDQIQQVAFITHGFVGGDLAT 188
LR GR D+E+ L +P R IL C ++P + + +A +T GFVG DL
Sbjct: 419 LRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFN---FCHLAHLTPGFVGADLMA 475
Query: 189 LLSNATSALL--------------VETEG-------------------TGQVLSYDGVMR 215
L A + E EG ++ G++R
Sbjct: 476 LCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPTSETQDELQRLLGLLR 535
Query: 216 ALDHVKPSAMRQVLVE----------------------VPNVKWSDIGGQDEVKLKLRQS 253
D + M+ + +E VPNV W+DIG ++++ +L +
Sbjct: 536 DQDPLSEEQMQGLCIELNDFIVALAEVQPSAKREGFVTVPNVTWADIGALEDIRDELIMA 595
Query: 254 VEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
+ P+++P+ F LG+ P GIL+ GPPGC KT++AKA+A ES LNFISVK
Sbjct: 596 ILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVK 646
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 118/233 (50%), Gaps = 23/233 (9%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ GIL+ G G GKT L ++A+ ++ + ++ ++ + + GE+E ++ F A
Sbjct: 610 GLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA 669
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQER----RLLSCLVTQVDRLHELQACVVLLAVTTSL 124
+ AP ++ D +D LC RSD+E R+++ L+T++D L Q V +LA T
Sbjct: 670 KNSAPCVIFFDEVDALCP--RRSDRETGASVRVVNQLLTEMDGLETRQQ-VFILAATNRP 726
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLL---TKVPHSLSTD-QIQQVA--FIT 178
D +D ++ PGRLD+ + + +P R AIL + TK P L D ++ +A
Sbjct: 727 DIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPP--LDEDVNLETIANDLRC 784
Query: 179 HGFVGGDLATLLSNAT-SALLVETE------GTGQV-LSYDGVMRALDHVKPS 223
+ + G DL L+ A+ AL E G G++ +S+ A VKPS
Sbjct: 785 NCYTGADLTALVREASLCALRQEITAQKNGVGAGELKVSHKHFEDAFKKVKPS 837
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 204 TGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEA 263
T + DG + AL K A R +++ NVK+ D+GG D LK + ++HPE
Sbjct: 231 TENLQEVDGEIEALLQKKAKA-RSTELQISNVKFEDVGGND-ATLKEVCKMLIHMRHPEV 288
Query: 264 FARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
+ LG+ PPRG+L+ GPPGC KT++A A+A E L + V
Sbjct: 289 YQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKV 328
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 177/388 (45%), Gaps = 93/388 (23%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ GIL++G +G GKT L ++A +KV I ++ S GE+E R++ F A
Sbjct: 246 GVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNA 305
Query: 69 LDHAPSLLLLDNLDVLCTGRNRS--DQERRLLSCLVTQVDRLHELQAC------------ 114
+ AP ++ +D +D + R + D ERR++S L+T +D L+ L +
Sbjct: 306 IAQAPCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQ 365
Query: 115 -------------------------------------VVLLAVTTSLDNVDVSLRTPGRL 137
V+++ T +++D +LR GR
Sbjct: 366 QQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGRF 425
Query: 138 DQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLSNA---- 193
D+EI L +P + R IL + +K+ + D +++A +T G+VG D+ L+ A
Sbjct: 426 DKEICLGIPDQTARCKILKVITSKMRLENNFD-YEEIATLTPGYVGADINLLVKEAATNS 484
Query: 194 -------------------------------TSALLVETEG------TGQVLSYDGVMRA 216
++ LL+ E + +A
Sbjct: 485 VNRIFTSNLNGASSSSSSSSSSTTNINNIGLSTELLISKEPLEPEKLNSLYIEMIDFKKA 544
Query: 217 LDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGIL 276
L V P+A R+ +PNV W D+G V+ +L S+ P+++P+ + +GI P G+L
Sbjct: 545 LKKVVPAAKREGFATIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVL 604
Query: 277 MFGPPGCSKTMIAKALATESKLNFISVK 304
M+GPPGC KT++AKA+A+E + NFISVK
Sbjct: 605 MYGPPGCGKTLLAKAIASECQANFISVK 632
Score = 99.0 bits (245), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 116/229 (50%), Gaps = 11/229 (4%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+L+YG G GKT L ++AS + + + ++ ++ +K+ GE+E ++ F A
Sbjct: 596 GIDSPAGVLMYGPPGCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRA 655
Query: 69 LDHAPSLLLLDNLDVLCTGR-----NRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS 123
+P ++ D D L R + R+++ L+T++D L E ++ V ++A T
Sbjct: 656 AASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGL-EKRSEVFIIAATNR 714
Query: 124 LDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQ-QVAFITHGFV 182
D +D ++ PGRLD+ + +P+PS ++R IL L K+P D I+ H F
Sbjct: 715 PDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSFS 774
Query: 183 GGDLATLL----SNATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQ 227
G DL+ L+ ++A S ++ + + AL +KPS R+
Sbjct: 775 GADLSLLVKEAANHAISRGFDNNSTEPDTVTMEDFIFALSKIKPSVSRK 823
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 52/72 (72%)
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+P + +S++GG + +R+ +E+P+ HPE ++ LG++PPRGIL+ GP GC KT++AKA
Sbjct: 210 IPTINFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKA 269
Query: 292 LATESKLNFISV 303
+A E K+ ++
Sbjct: 270 IAGELKVPLFAI 281
>sp|Q9SS94|CD48C_ARATH Cell division control protein 48 homolog C OS=Arabidopsis thaliana
GN=CDC48C PE=2 SV=2
Length = 820
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/335 (28%), Positives = 160/335 (47%), Gaps = 42/335 (12%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+K +GIL +G G GKT L +++A+ V I ++ S G +E ++ F A
Sbjct: 263 GVKPPSGILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKA 322
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQV-------------DRLHELQACV 115
APS++ +D +D + G R +Q+R + +VTQ+ + V
Sbjct: 323 YRTAPSIVFIDEIDAI--GSKRENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFV 380
Query: 116 VLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVA 175
+++ T D +D +LR GR + EI L P D RA IL + K+ D+ +++A
Sbjct: 381 LVIGATNRPDALDPALRRSGRFETEIALTAPDEDARAEILSVVAQKLRLEGPFDK-KRIA 439
Query: 176 FITHGFVGGDLATL--------LSNATSALLVETEGTGQ------------------VLS 209
+T GFVG DL ++ + + E G G+ +
Sbjct: 440 RLTPGFVGADLESVAYLAGRKAIKRILDSRKSEQSGDGEDDKSWLRMPWPEEELEKLFVK 499
Query: 210 YDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGI 269
A++ V+ S R+ VP+VKW D+GG D ++L+ + + P+K P+ + G+
Sbjct: 500 MSDFEEAVNLVQASLTREGFSIVPDVKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGV 559
Query: 270 KPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
G L++GPPGC KT+IAKA A E+ NF+ +K
Sbjct: 560 DLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIK 594
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
G L+YG G GKT + + A+ + + I+ A++ +K+ GE+E ++ F A AP
Sbjct: 564 GFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPC 623
Query: 75 LLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
++ D +D L T R + RLL+ + ++D + V ++ T D VD +
Sbjct: 624 VIFFDEVDALTTSRGKEGAWVVERLLNQFLVELDGGE--RRNVYVIGATNRPDVVDPAFL 681
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLSN 192
PGR + +P+P+ D+RA+IL + K P S D GF G DLA L+
Sbjct: 682 RPGRFGNLLYVPLPNADERASILKAIARKKPIDPSVDLDGIAKNNCEGFSGADLAHLVQK 741
Query: 193 ATSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEV-PNVKWSDIGGQDEVKLKLR 251
AT + E G+ + D +K Q L V P+V D + KL+
Sbjct: 742 ATFQAVEEMIGSSESSEDDVTDITQCTIKTRHFEQALSLVSPSVNKQQRRHYDALSTKLQ 801
Query: 252 QSV 254
+SV
Sbjct: 802 ESV 804
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 237 WSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATES 296
+ D GG ++ +L +V +P+ +PE F ++G+KPP GIL GPPGC KT +A A+A E+
Sbjct: 232 FKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTKLANAIANEA 291
Query: 297 KLNFISV 303
+ F +
Sbjct: 292 GVPFYKI 298
>sp|Q9LET7|CI111_ARATH Calmodulin-interacting protein 111 OS=Arabidopsis thaliana
GN=CIP111 PE=1 SV=1
Length = 1022
Score = 139 bits (351), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/187 (38%), Positives = 115/187 (61%), Gaps = 3/187 (1%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G++ G+LI+G GTGKTSL + A H V+ + ++ S++ GE+E L F +A
Sbjct: 414 GLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSA 473
Query: 69 LDHAPSLLLLDNLDVLCTGRNRSDQE--RRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
+ P+++ +D+LD + R +E +R+++ L+ +D + VV++A T D+
Sbjct: 474 SNATPAVVFIDDLDAIAPARKEGGEELSQRMVATLLNLMDGISRTDG-VVVIAATNRPDS 532
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
++ +LR PGRLD+EIE+ VPS QR+ ILH +L + HSLS Q++Q+A THGFVG DL
Sbjct: 533 IEPALRRPGRLDREIEIGVPSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFVGADL 592
Query: 187 ATLLSNA 193
+ L A
Sbjct: 593 SALCCEA 599
Score = 136 bits (342), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/114 (50%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
Query: 192 NATSALLVETEGTGQV-LSYDGVMRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKL 250
N+ S ++ +G + + ++ A ++PSAMR+V++EVP V W D+GGQ+EVK +L
Sbjct: 677 NSCSEQMLRKQGEHTLSVGFEDFENAKTKIRPSAMREVILEVPKVNWEDVGGQNEVKNQL 736
Query: 251 RQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISVK 304
++VEWP KH +AF R+G +PP GILMFGPPGCSKT++A+A+A+E+KLNF++VK
Sbjct: 737 MEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVK 790
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 115/202 (56%), Gaps = 6/202 (2%)
Query: 4 ALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKA 63
A + G + +GIL++G G KT + ++AS K++ + ++ ++FSK+ GE+E +++
Sbjct: 749 AFKRIGTRPPSGILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRS 808
Query: 64 AFDAALDHAPSLLLLDNLDVLCTGRNRSDQ----ERRLLSCLVTQVDRLHELQACVVLLA 119
F A +APS++ D +D L + R + + R++S L+ ++D LH+ + V ++A
Sbjct: 809 LFAKARANAPSIIFFDEIDSLASIRGKENDGVSVSDRVMSQLLVELDGLHQ-RVGVTVIA 867
Query: 120 VTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D +L PGR D+ + + P+ R AIL L K+P S S ++++A IT
Sbjct: 868 ATNRPDKIDSALLRPGRFDRLLYVGPPNETDREAILKIHLRKIPCS-SDICLKELASITK 926
Query: 180 GFVGGDLATLLSNATSALLVET 201
G+ G D++ + A A L E+
Sbjct: 927 GYTGADISLICREAAIAALEES 948
Score = 45.1 bits (105), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 267 LGIKPPRGILMFGPPGCSKTMIAKALATESKLNFISV 303
LG++P +G+L+ GPPG KT +A+ A S +NF SV
Sbjct: 413 LGLRPTKGVLIHGPPGTGKTSLARTFARHSGVNFFSV 449
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 128 bits (321), Expect = 7e-29, Method: Composition-based stats.
Identities = 87/316 (27%), Positives = 157/316 (49%), Gaps = 28/316 (8%)
Query: 16 ILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPSL 75
+L+ G G GK +L++ +A M +H + ++ + ++ ++ + A + P+L
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 76 LLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQ--------ACVVLLAVTTSLDNV 127
L+L N +VL QE++ + T ++ L ++ + L +T +++++
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLINILKDINDSNTSNINSNKYPLIITVTVNSM 789
Query: 128 D-VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSL-STDQIQQVAFITHGFVGGD 185
D +S + EI L P +QR IL L +P + +T I+ ++ T F+ +
Sbjct: 790 DELSNKVRNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVSIKNLSIRTASFLNSN 849
Query: 186 LATLLS----NATSALL------------VETEGTGQVLSYDGVMRALDHVKPSAMRQV- 228
L L+ NA +L +E G ++ D + ++L ++ +
Sbjct: 850 LRALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQSSSIG 909
Query: 229 LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMI 288
++PNV W D+GG VK ++ +++ PL+HP FA GI GIL+FGPPG KT++
Sbjct: 910 APKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFAS-GIGKRSGILLFGPPGTGKTLL 968
Query: 289 AKALATESKLNFISVK 304
AKA+ATE LNF+SVK
Sbjct: 969 AKAIATECSLNFLSVK 984
Score = 77.0 bits (188), Expect = 2e-13, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 6/196 (3%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L ++G+ K +GIL++G GTGKT L ++A+ ++ + ++ ++ + + GE+E ++
Sbjct: 944 LFASGIGKRSGILLFGPPGTGKTLLAKAIATECSLNFLSVKGPELINMYIGESEKNIREI 1003
Query: 65 FDAALDHAPSLLLLDNLDVLCTGR-NRSDQ---ERRLLSCLVTQVDRLHELQACVVLLAV 120
F+ A P ++ D LD L R N +D R++S L+ ++D + + + V ++
Sbjct: 1004 FNKARQAKPCVIFFDELDSLAPSRGNGADSGGVMDRVVSQLLAELDGMQK-SSDVFIIGA 1062
Query: 121 TTSLDNVDVSLRTPGRLDQEIELPVPS-RDQRAAILHCLLTKVPHSLSTDQIQQVAFITH 179
T D +D SL PGRLD+ + L + S ++ + IL L K + D + V
Sbjct: 1063 TNRPDLLDSSLMRPGRLDRLLYLGISSEKENQFKILQALTRKFNLADDVDLRKVVENCPM 1122
Query: 180 GFVGGDLATLLSNATS 195
G D L S+A S
Sbjct: 1123 NLTGADFYALASDAMS 1138
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 125 bits (314), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/320 (30%), Positives = 166/320 (51%), Gaps = 23/320 (7%)
Query: 5 LQSNG--MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLK 62
LQ G + + +L+ G G GKT+++ + SH+ +H + + + + ++ G E +L+
Sbjct: 453 LQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQ 512
Query: 63 AAFDAALDHAPSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
A F A P++LLL +D+L R+ ++ R+++ L + L +C L+ V T
Sbjct: 513 AIFSRARRCRPAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVAT 572
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+ D+ E+E+P S QR +IL L +P + + Q+A GFV
Sbjct: 573 TSRAQDLPADVQTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVN-LAQLARRCAGFV 631
Query: 183 GGDLATLLSNATSA-------------LLVETEG----TGQVLSYDGVMRALDHVKPSAM 225
GDL LL++++ A L E EG G L + +AL+ ++ +
Sbjct: 632 VGDLYALLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHS 691
Query: 226 RQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCS 284
+ V ++P+V W D+GG EVK ++ ++++ PL+HPE + + G+L+ GPPG
Sbjct: 692 QAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRR--SGLLLHGPPGTG 749
Query: 285 KTMIAKALATESKLNFISVK 304
KT++AKA+ATE L F+SVK
Sbjct: 750 KTLLAKAVATECSLTFLSVK 769
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 19 YGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPSLLLL 78
+G GTGKT L ++A+ + + ++ ++ + + G++E ++ F A AP ++
Sbjct: 743 HGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFF 802
Query: 79 DNLDVLCTGRNRSDQE----RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTP 134
D LD L R RS R++S L+ ++D LH Q V ++ T D +D +L P
Sbjct: 803 DELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGATNRPDLLDPALLRP 861
Query: 135 GRLDQEIELPVPSRDQRAA---ILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLS 191
GR D+ + V + + RA+ +L + K S + + G DL +L S
Sbjct: 862 GRFDKLVF--VGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCS 919
Query: 192 NATSALL----------VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+A +A L +E + +L+ + +++A ++PS Q L+ ++
Sbjct: 920 DAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQELLRYKRIQ 974
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 114 bits (286), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 41/331 (12%)
Query: 14 NGILIYGVNGTGKTSLIHSLASH---------------------MKVHTVVIQVADMFSK 52
NG++I G +G+GK+ L SL + +KV + Q +F K
Sbjct: 603 NGMIIAGSHGSGKSLLATSLGGYYSTDSRSNAFIIKLDCNQLKELKVENIRKQFNKLFYK 662
Query: 53 FYGEAEFRLKAAFDAALDHAPSLLLLDNLDVLCTGRNRSDQERRLLSC--LVTQVDRL-- 108
E+ L A P +++L++LD++ N D ++ C LV+ + L
Sbjct: 663 SCKESGNTLSATTSTNTTPPPIIIILESLDLILGTPNDQDPGSKI-RCEQLVSHIKSLCF 721
Query: 109 --HELQACVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSL 166
+ +V++A S ++ S++ P IEL P+R++R IL L L
Sbjct: 722 KYQNRSSPIVMIATVISSQSLCQSIQIPELFGLTIELQAPTREERVEILERYLKYQGKQL 781
Query: 167 STDQ---IQQVAFITHGFVGGDLATLLSNATS-ALLVETEGTGQ---------VLSYDGV 213
Q + + + G++G D+ ++ + + + E E ++ + +
Sbjct: 782 KDQQSLNLMKFSASMEGYLGCDVEQIVDRSIHLSSIKEIENNNNNNDDNDDDNIIEFSII 841
Query: 214 MRALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPR 273
+A + P ++ + + +KW DIGG D V+ L++++EWP K+P+ F ++
Sbjct: 842 EKAKEGYTPITLKGIKLHSSEIKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRS 901
Query: 274 GILMFGPPGCSKTMIAKALATESKLNFISVK 304
GIL++GP GC KT++A A+A E LNFISVK
Sbjct: 902 GILLYGPTGCGKTLLASAIAGECGLNFISVK 932
Score = 91.7 bits (226), Expect = 7e-18, Method: Composition-based stats.
Identities = 58/191 (30%), Positives = 103/191 (53%), Gaps = 4/191 (2%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
QS+ ++ +GIL+YG G GKT L ++A ++ + ++ ++ +K+ G +E ++
Sbjct: 892 FQSSPLRLRSGILLYGPTGCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDV 951
Query: 65 FDAALDHAPSLLLLDNLDVLCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F A P +L D D + G + S R+++ +TQ+D + L V +LA T+
Sbjct: 952 FSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTG-VYVLAATS 1010
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
D +D +L PGRLD+ + +P ++R IL CL +K+ S S ++Q++ T +
Sbjct: 1011 RPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSI-SLEQLSTNTQYYT 1069
Query: 183 GGDLATLLSNA 193
G DL L+ NA
Sbjct: 1070 GADLRALMYNA 1080
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 158/320 (49%), Gaps = 23/320 (7%)
Query: 5 LQSNG--MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLK 62
LQ G + + +L+ G G+GKT+ + + S + +H + + + + + E +L+
Sbjct: 454 LQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRAVETKLQ 513
Query: 63 AAFDAALDHAPSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
A F A P++LLL +D+L R+ ++ R+ + L + L C L+ V T
Sbjct: 514 ATFSRARRCRPAVLLLTAVDLLGRDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVAT 573
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+ D+ E+E+PV S QR +IL L +P + + Q+A GFV
Sbjct: 574 TSRVQDLPTDVQTAFPHELEVPVLSEAQRLSILQALTAHLPLGQEVN-LPQLARRCAGFV 632
Query: 183 GGDLATLL-------------SNATSALLVETEG----TGQVLSYDGVMRALDHVKPSAM 225
GDL LL S + L E EG G L + +ALD ++ +
Sbjct: 633 VGDLYALLTHTCRAACTRIRASGSAGGLSEEDEGDLCVAGFPLLAEDFGQALDQLQTAHS 692
Query: 226 RQV-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCS 284
+ V +P+V W D+GG +VK ++ ++++ PL+HPE + + G+L+ GPPG
Sbjct: 693 QAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRR--SGLLLHGPPGTG 750
Query: 285 KTMIAKALATESKLNFISVK 304
KT++AKA+ATE L F+SVK
Sbjct: 751 KTLLAKAVATECSLTFLSVK 770
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 107/235 (45%), Gaps = 20/235 (8%)
Query: 19 YGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPSLLLL 78
+G GTGKT L ++A+ + + ++ ++ + + G++E ++ F A AP ++
Sbjct: 744 HGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFF 803
Query: 79 DNLDVLCTGRNRSDQE----RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTP 134
D LD L R RS R++S L+ ++D LH Q V ++ T D +D +L P
Sbjct: 804 DELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGATNRPDLLDPALLRP 862
Query: 135 GRLDQEIELPVPSRDQRAA---ILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLS 191
GR D+ + V + + RA+ +L + K S + G DL +L S
Sbjct: 863 GRFDKLVF--VGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGADLYSLCS 920
Query: 192 NATSALL----------VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+A L +E + +L+ + +++A ++PS Q L+ ++
Sbjct: 921 DAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQ 975
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum
(isolate 3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 109 bits (273), Expect = 2e-23, Method: Composition-based stats.
Identities = 66/187 (35%), Positives = 110/187 (58%), Gaps = 8/187 (4%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFD 66
S G+ G+L++G+ GTGKTS+ ++A+ + +I ++ SK GE+E +L+ F
Sbjct: 555 SIGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFK 614
Query: 67 AALDHAPSLLLLDNLDVLCTGRNRSDQ--ERRLLSCLVTQVDRLHELQACVVLLAVTTSL 124
A + P ++ +D +D + R++S+ E+R++S L+T +D L + V++LA T
Sbjct: 615 KASEKTPCIIFIDEIDSIANKRSKSNNELEKRVVSQLLTLMDGLKK-NNNVLVLAATNRP 673
Query: 125 DNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPH-SLSTD-QIQQVAFITHGFV 182
+++D +LR GR D+EIE+PVP R I LLTK L D ++++A HG+V
Sbjct: 674 NSIDPALRRFGRFDREIEIPVPDEQGRYEI---LLTKTKKMKLDPDVNLRKIAKECHGYV 730
Query: 183 GGDLATL 189
G DLA L
Sbjct: 731 GADLAQL 737
Score = 100 bits (249), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/190 (30%), Positives = 104/190 (54%), Gaps = 5/190 (2%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
GIL+YG G GKT L ++A+ K + + ++ ++ + ++GE+E ++ FD A +P
Sbjct: 970 GILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPC 1029
Query: 75 LLLLDNLDVLCTGRN---RSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSL 131
++ D +D L RN +D R+++ ++T++D ++E + + ++A T D +D +L
Sbjct: 1030 IIFFDEIDSLAKERNSNTNNDASDRVINQILTEIDGINE-KKTIFIIAATNRPDILDKAL 1088
Query: 132 RTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLS 191
PGRLD+ I + +P R +I +L P + D I +A T GF G D+ L
Sbjct: 1089 TRPGRLDKLIYISLPDLKSRYSIFKAILKNTPLNEDVD-IHDMAKRTEGFSGADITNLCQ 1147
Query: 192 NATSALLVET 201
+A + + ET
Sbjct: 1148 SAVNEAIKET 1157
Score = 98.2 bits (243), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 65/89 (73%)
Query: 216 ALDHVKPSAMRQVLVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGI 275
AL+ PS++R+ V++P V W+DIGG +EVK +L++++ +PL++ + + +GI
Sbjct: 912 ALNICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGI 971
Query: 276 LMFGPPGCSKTMIAKALATESKLNFISVK 304
L++GPPGC KT++AKA+A E K NFISVK
Sbjct: 972 LLYGPPGCGKTLLAKAIANECKANFISVK 1000
Score = 68.9 bits (167), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
++ + D+GG + K+R+ +E PLK+PE F +GI P+G+LM G PG KT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 294 TES 296
ES
Sbjct: 583 NES 585
>sp|O74941|PEX1_SCHPO Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex1 PE=3 SV=1
Length = 937
Score = 107 bits (268), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 146/313 (46%), Gaps = 11/313 (3%)
Query: 2 DYALQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQV----ADMFSKFYGEA 57
++A N + I I G G GK++L+HSL + ++++ Q+ +++ + +
Sbjct: 361 EFAQVRNAVFLHQNIYINGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKF 420
Query: 58 EFRLKAAFDAALDHAPSLLLLDNLDVLCTGRNRSDQ----ERRLLSCLVTQVDRLHELQA 113
+ F A + PS++ LD++ L + N + + E R ++ L Q+ L +
Sbjct: 421 QSFWNNVFIQAERYEPSIIYLDDVHCLISSSNENGELGFVEEREIAFLQHQIINLKRKRK 480
Query: 114 CVVLLAVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQ 173
++ + +L P +I LP + +R IL + + ++ D I+
Sbjct: 481 -IIFIGFGEEFLTFSENLVLPLLFQIKIALPSLAVTRRKEILTTIFQENFSDITMDSIEF 539
Query: 174 VAFITHGFVGGDLATLLSNATSALLVET--EGTGQVLSYDGVMRALDHVKPSAMRQVLVE 231
++ T G++ DL + S VE G +++ + + L P +R+
Sbjct: 540 ISVKTEGYLMTDLVLFVKRLLSEAFVEKIQNGPKHLMNKGLIEKTLKDFVPLQLRKAKFV 599
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
+++W DI G E K +R +E P+K+ + + ++ P GIL+FG PGC KT +A A
Sbjct: 600 KSSIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASA 659
Query: 292 LATESKLNFISVK 304
+++ + FIS+K
Sbjct: 660 ISSTFPVQFISIK 672
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 99/181 (54%), Gaps = 4/181 (2%)
Query: 15 GILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPS 74
GIL++G G GKT L +++S V + I+ ++ K+ G++E ++ F A P
Sbjct: 642 GILLFGYPGCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPC 701
Query: 75 LLLLDNLDVLCT--GRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
+L D D + G++ + R+++ ++TQ+D L V ++A TT D +D +L
Sbjct: 702 VLFFDEFDSVAPRRGQDSTGVTDRVVNQILTQMDGAESLDG-VYIVAATTRPDMIDPALL 760
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLSN 192
PGRLD+ I +P+ ++R +L L + H + +++++ +T G+ DL++LL +
Sbjct: 761 RPGRLDKLIFCDLPNEEERLEVLQKLANRF-HIENAAMLKKLSTLTDGYTYADLSSLLYD 819
Query: 193 A 193
A
Sbjct: 820 A 820
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 154/318 (48%), Gaps = 30/318 (9%)
Query: 14 NG-ILIYGVNGTGKTSLIHSLASH----MKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
NG +L+ G G+GK++L ++ + H + + K + L+ AF A
Sbjct: 592 NGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLENIQKTLEVAFSEA 651
Query: 69 LDHAPSLLLLDNLDVLC------TGRNRSD--QERRLLSCLVTQVDRLHELQACVVLLAV 120
+ PS++LLD+LD++ + D Q +RL L + + + V L+A
Sbjct: 652 VWMQPSVVLLDDLDLIAGLPAVPEHEHSPDAVQSQRLAHALNDMIKEFISMGSLVALIAT 711
Query: 121 TTSLDNVD---VSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-------Q 170
+ S ++ VS + + P+++QR IL C + K + L D
Sbjct: 712 SQSQQSLHPLLVSAQGVHIFQCVQHIQPPNQEQRCEIL-CNVIK--NKLDCDINKFTDLD 768
Query: 171 IQQVAFITHGFVGGDLATLLSNATSALLVETEGTGQ---VLSYDGVMRALDHVKPSAMRQ 227
+Q VA T GFV D L+ A + L + + VL+ +AL P+++R
Sbjct: 769 LQHVAKETGGFVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRS 828
Query: 228 VLVEVP-NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
V + P ++ W IGG EV+ L +++ P K+PE FA L I+ GIL++GPPG KT
Sbjct: 829 VNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKT 888
Query: 287 MIAKALATESKLNFISVK 304
++A +A ES++NFISVK
Sbjct: 889 LLAGVIARESRMNFISVK 906
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 101/186 (54%), Gaps = 4/186 (2%)
Query: 10 MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAAL 69
+++ GIL+YG GTGKT L +A +++ + ++ ++ SK+ G +E ++ F A
Sbjct: 871 IRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQ 930
Query: 70 DHAPSLLLLDNLDVLC--TGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNV 127
P +L D + + G + + R+++ L+TQ+D + LQ V +LA T+ D +
Sbjct: 931 AAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQG-VYVLAATSRPDLI 989
Query: 128 DVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLA 187
D +L PGRLD+ + P P + R IL+ L +P + D +Q VA +T F G DL
Sbjct: 990 DPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVD-LQHVASVTDSFTGADLK 1048
Query: 188 TLLSNA 193
LL NA
Sbjct: 1049 ALLYNA 1054
>sp|Q07844|RIX7_YEAST Ribosome biogenesis ATPase RIX7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RIX7 PE=1 SV=1
Length = 837
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 171/373 (45%), Gaps = 81/373 (21%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVI---------------QVADMFS 51
S G++ G+L++G G GKTS+ ++LA ++V + I ++ D+F
Sbjct: 233 STGVEPPRGVLLHGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFD 292
Query: 52 K---------FYGE---------------AEFRLKAAFDAALDH--------APSLLL-- 77
+ F+ E E R+ A ++D P +++
Sbjct: 293 EARSLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELTMEKTNGKPVIIIGA 352
Query: 78 ---LDNLDVLCTGRNRSDQERRLLSCL--VTQVDRLHELQACVVLLAVTTSLDNVDVSLR 132
D+LD R D+E CL +V RLH L+ L + ++D ++
Sbjct: 353 TNRPDSLDAALRRAGRFDRE----ICLNVPNEVSRLHILKKMSDNLKIDGAIDFAKLAKL 408
Query: 133 TPGRLDQEIELPVPSRDQRAAILHCLLT----KVPHSLSTDQIQQVAFITHGFVGGDLAT 188
TPG + +++ V + AI T K + +TD + I GD ++
Sbjct: 409 TPGFVGADLKALVTAAGT-CAIKRIFQTYANIKSTPTTATDSSEDNMEIDET-ANGDESS 466
Query: 189 LLSNATS----ALLVETEG--------TGQVLS-----YDGVMRALDHVKPSAMRQVLVE 231
L + A L V + +G+ LS Y+ ++AL ++P+A R+
Sbjct: 467 LKNTANMIDPLPLSVVQQFIRNYPEPLSGEQLSLLSIKYEDFLKALPTIQPTAKREGFAT 526
Query: 232 VPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKA 291
VP+V W+++G V+L+L ++ P+K PE + ++GI P G+L++GPPGC KT++AKA
Sbjct: 527 VPDVTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKA 586
Query: 292 LATESKLNFISVK 304
+A ES+ NFIS+K
Sbjct: 587 VANESRANFISIK 599
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 9 GMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAA 68
G+ G+L++G G GKT L ++A+ + + + I+ ++ +K+ GE+E ++ F A
Sbjct: 563 GISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRA 622
Query: 69 LDHAPSLLLLDNLDVLCTGRNR--SDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
P ++ D LD L R+ S+ R+++ L+T++D L++ + V+ A T D
Sbjct: 623 RASVPCVIFFDELDALVPRRDTSLSESSSRVVNTLLTELDGLNDRRGIFVIGA-TNRPDM 681
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTD-QIQQVAFIT--HGFVG 183
+D ++ PGRLD+ + + +P+ +++ I+ L LS+D +++ + F G
Sbjct: 682 IDPAMLRPGRLDKSLFIELPNTEEKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNNFSG 741
Query: 184 GDLATLLSNAT 194
DLA L+ ++
Sbjct: 742 ADLAALVRESS 752
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 233 PNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKAL 292
PN +GG D+V +L + + P+ HPE F G++PPRG+L+ GPPGC KT IA AL
Sbjct: 200 PNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIANAL 259
Query: 293 ATESKLNFISV 303
A E ++ FIS+
Sbjct: 260 AGELQVPFISI 270
>sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PEX6 PE=3 SV=2
Length = 1024
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 143/311 (45%), Gaps = 35/311 (11%)
Query: 23 GTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPSLLLLDNLD 82
G GK++++ S+A+ + I + + L+A D A +P +++L +L+
Sbjct: 480 GVGKSTVLRSVAAQCGISVFEISCFGLIGDNEAQTLGTLRAKLDRAYGCSPCVVVLQHLE 539
Query: 83 VLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTS-LDNVDVSLRTPGRLDQEI 141
+ +SDQ+ + + VD L + VLLA T++ D + ++R+ R EI
Sbjct: 540 SIA---KKSDQDGKDEGIVSKLVDVLADYSGHGVLLAATSNDPDKISEAIRS--RFQFEI 594
Query: 142 ELPVPSRDQRAAILHCL---------LTKVPHSLSTD-QIQQVAFITHGFVGGDLATLLS 191
E+ VPS QR I L + P SL +D ++ +A + G DL ++
Sbjct: 595 EIGVPSEPQRRQIFSHLTKSGPGGDSIRNAPISLRSDVSVENLALQSAGLTPPDLTAIVQ 654
Query: 192 NA------------------TSALLVETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVP 233
LL + GT Q+ D D + + +P
Sbjct: 655 TTRLRAIDRLNKLTKDSDTTLDDLLTLSHGTLQLTPSDFDDAIADARQKYSDSIGAPRIP 714
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
NV W D+GG + VK + ++E PLK+P F+ G+K GIL +GPPG KT++AKA+A
Sbjct: 715 NVGWDDVGGMEGVKKDILDTIETPLKYPHWFSD-GVKKRSGILFYGPPGTGKTLLAKAIA 773
Query: 294 TESKLNFISVK 304
T LNF SVK
Sbjct: 774 TTFSLNFFSVK 784
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 10/195 (5%)
Query: 7 SNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFD 66
S+G+KK +GIL YG GTGKT L ++A+ ++ ++ ++ + + GE+E ++ F
Sbjct: 746 SDGVKKRSGILFYGPPGTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQ 805
Query: 67 AALDHAPSLLLLDNLDVLCTGR-NRSDQE---RRLLSCLVTQVDRLHELQA-CVVLLAVT 121
A D P ++ D LD + R N+ D R++S L+ ++D + V ++ T
Sbjct: 806 KARDAKPCVVFFDELDSVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGAT 865
Query: 122 TSLDNVDVSLRTPGRLDQEIELPVP-SRDQRAAILHCLLTK--VPHSLSTDQIQQVAFIT 178
D +D +L PGR D+ + L + + +++ I+ L K + +S + I + T
Sbjct: 866 NRPDLLDEALLRPGRFDKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFT 925
Query: 179 HGFVGGDLATLLSNA 193
F G D L S+A
Sbjct: 926 --FTGADFYALCSDA 938
>sp|P40340|TBP7_YEAST Tat-binding homolog 7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YTA7 PE=1 SV=2
Length = 1379
Score = 105 bits (262), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 103/187 (55%), Gaps = 10/187 (5%)
Query: 15 GILIYGVNGTGKTSLIHSLAS-----HMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAAL 69
G+L +G GTGKT + +LA+ K+ + + AD+ SK+ GEAE +L+ F+ A
Sbjct: 449 GVLFHGPPGTGKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAK 508
Query: 70 DHAPSLLLLDNLDVLCTGRNRSDQER---RLLSCLVTQVDRLHELQACVVLLAVTTSLDN 126
H PS++ D +D L R+ S QE+ ++S L+ +D + + V+++ T D
Sbjct: 509 KHQPSIIFFDEIDGLAPVRS-SKQEQIHASIVSTLLALMDGMDN-RGQVIVIGATNRPDA 566
Query: 127 VDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDL 186
VD +LR PGR D+E P+P R IL K LST+ I ++AF+T G+ G DL
Sbjct: 567 VDPALRRPGRFDREFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADL 626
Query: 187 ATLLSNA 193
+L + A
Sbjct: 627 RSLCTEA 633
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 234 NVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKTMIAKALA 293
NV + DIGG D +L++ V PL +PE + I PPRG+L GPPG KT++A+ALA
Sbjct: 409 NVNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALA 468
Query: 294 T-----ESKLNFISVK 304
E K+ F K
Sbjct: 469 ASCSSDERKITFFMRK 484
>sp|P54777|PEX6_RAT Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1
Length = 978
Score = 104 bits (259), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 159/318 (50%), Gaps = 21/318 (6%)
Query: 5 LQSNG--MKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLK 62
LQ G + + +L+ G G+GKT+ + + S + +H + + + + + E +L+
Sbjct: 453 LQPGGTLLTGTSCVLLQGPPGSGKTTAVTAACSRLGLHLLKVPCSSLCADSSRTVETKLQ 512
Query: 63 AAFDAALDHAPSLLLLDNLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTT 122
F A P +LLL LD+L R+ ++ R+++ L + L C L+ V T
Sbjct: 513 TTFSRARRCRPVVLLLTALDLLGRDRDGLGEDARVVATLRHLLLDEDPLSRCPPLMVVAT 572
Query: 123 SLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPHSLSTDQIQQVAFITHGFV 182
+ D+ E+E+PV S QR ++L L +P + + Q+A GFV
Sbjct: 573 TSRVQDLPTDVRTAFPHELEVPVLSESQRLSVLQALTAHLPLGQEVN-LSQLARRCAGFV 631
Query: 183 GGDLATLLSNATSALLVETEGTGQVLS---------------YDGVMRALDHVKPSAMRQ 227
GDL LL++A+ A + G +S + +ALD ++ + +
Sbjct: 632 VGDLYALLTHASRAACTRIKAAGLAMSEEDEGELCAAGFPLLAEDFGQALDQLQTAHSQA 691
Query: 228 V-LVEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
V ++P+V W D+GG +VK ++ ++++ PL+HPE + + G+L+ GPPG KT
Sbjct: 692 VGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSLGLRR--SGLLLHGPPGTGKT 749
Query: 287 MIAKALATESKLNFISVK 304
++AKA+ATE L F+SVK
Sbjct: 750 LLAKAVATECSLTFLSVK 767
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 20/235 (8%)
Query: 19 YGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDHAPSLLLL 78
+G GTGKT L ++A+ + + ++ ++ + + G++E ++ F A AP ++
Sbjct: 741 HGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFF 800
Query: 79 DNLDVLCTGRNRSDQE----RRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTP 134
D LD L R RS R++S L+ ++D LH Q V ++ T D +D +L P
Sbjct: 801 DELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQD-VFVIGATNRPDLLDPALLRP 859
Query: 135 GRLDQEIELPVPSRDQRAA---ILHCLLTKVPHSLSTDQIQQVAFITHGFVGGDLATLLS 191
GR D+ + V + + RA+ +L + K S + + G DL +L S
Sbjct: 860 GRFDKLVF--VGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGADLYSLCS 917
Query: 192 NATSALL----------VETEGTGQVLSYDGVMRALDHVKPSAMRQVLVEVPNVK 236
+A L +E + +L+ + +++A ++PS Q L+ ++
Sbjct: 918 DAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAARLQPSVSEQELLRYKRIQ 972
>sp|P33289|PEX6_PICPA Peroxisomal biogenesis factor 6 OS=Komagataella pastoris GN=PEX6
PE=3 SV=1
Length = 1165
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 149/318 (46%), Gaps = 46/318 (14%)
Query: 25 GKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAAFDAALDH-----APSLLLLD 79
GK+ L+HSLA VH V I D + +E + LD P ++ +
Sbjct: 575 GKSLLVHSLALECGVHLVEI---DGYEVLNPSSESKTIGTIRGKLDRVVEGCTPLIVFIK 631
Query: 80 NLDVLCTGRNRSDQERRLLSCLVTQVDRLHELQACVVLLAVTTSLDNVDVSLRTPGRLDQ 139
+++ L + Q++ L+ + ++ + + V+ +A T DN+ LR +
Sbjct: 632 HIEALT--KKSEQQQKDSLAVKINELIDEYTAKPGVLFVASTNDSDNLSDELR--AKFKF 687
Query: 140 EIELPVPSRDQRAAILHCLLTKVPHSLS--TDQIQQVAFI-------------THGFVGG 184
EI L VPS +R I L+ + T+ ++++F + G
Sbjct: 688 EIVLGVPSEQERTLIFKYLIDFDQKTTPKVTEGTRELSFAPRNDLSLSSLSLQSAGLTPR 747
Query: 185 DLATLLSNATSALL--VETEGTGQVLSYDG-VMRALDHVK--PSAMRQVL---------- 229
DL +++ NA + + VE+ +S++ V + ++K P + + +
Sbjct: 748 DLISIVENAKTLAVDRVESLAKHHNVSFENMVYSSGGYIKFTPEDVEKSINTARNKFSDS 807
Query: 230 ---VEVPNVKWSDIGGQDEVKLKLRQSVEWPLKHPEAFARLGIKPPRGILMFGPPGCSKT 286
+PNVKW D+GG D VK ++ +++ P+KHPE F+ GIK GIL +GPPG KT
Sbjct: 808 IGAPRIPNVKWEDVGGLDVVKDEILDTIDMPMKHPELFSN-GIKKRSGILFYGPPGTGKT 866
Query: 287 MIAKALATESKLNFISVK 304
++AKA+AT LNF SVK
Sbjct: 867 LLAKAIATNFALNFFSVK 884
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 101/198 (51%), Gaps = 11/198 (5%)
Query: 5 LQSNGMKKCNGILIYGVNGTGKTSLIHSLASHMKVHTVVIQVADMFSKFYGEAEFRLKAA 64
L SNG+KK +GIL YG GTGKT L ++A++ ++ ++ ++ + + GE+E ++
Sbjct: 844 LFSNGIKKRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKV 903
Query: 65 FDAALDHAPSLLLLDNLDVLCTGR-NRSDQE---RRLLSCLVTQV--DRLHELQACVVLL 118
F A D P ++ D LD + R N+ D E R++S L+ ++ + V ++
Sbjct: 904 FQRARDAKPCVVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVV 963
Query: 119 AVTTSLDNVDVSLRTPGRLDQEIELPVPSRDQRAAILHCLLTKVPH---SLSTDQIQQVA 175
T D +D +L PGR D+ + L V ++ + + L++ H S+ D++ +
Sbjct: 964 GATNRPDLLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESC 1023
Query: 176 FITHGFVGGDLATLLSNA 193
T F G D L S+A
Sbjct: 1024 PFT--FTGADFYALCSDA 1039
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,083,372
Number of Sequences: 539616
Number of extensions: 4311432
Number of successful extensions: 22813
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 465
Number of HSP's that attempted gapping in prelim test: 19615
Number of HSP's gapped (non-prelim): 2695
length of query: 305
length of database: 191,569,459
effective HSP length: 117
effective length of query: 188
effective length of database: 128,434,387
effective search space: 24145664756
effective search space used: 24145664756
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)